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text: SARS-CoV-2: clinical or host-associated

text: pda|henrykunerth@gmail.com

text: pda|henrykunerth@gmail.com

text: public

text: NCBI

text: CENTRACARE LABORATORY SERVICES

text: USA: Minnesota

text: Homo sapiens

characteristic: host

characteristic: isolate

text: oropharynx

text: Severe acute respiratory syndrome coronavirus 2

text: baseline surveillance (random sampling)

text: Minnesota Department of Health, Public Health Laboratory


text: SARS-CoV-2: clinical or host-associated

text: pda|henrykunerth@gmail.com

text: pda|henrykunerth@gmail.com

text: public

text: NCBI

text: ALLINA HEALTH LABORATORY - ABBOTT NORTHWESTERN

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx


text: SARS-CoV-2: clinical or host-associated

text: pda|henrykunerth@gmail.com

text: pda|henrykunerth@gmail.com

text: public

text: NCBI

text: CARRIS HEALTH - RICE MEMORIAL HOSPITAL

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: baseline surveillance (random sampling)


text: SARS-CoV-2: clinical or host-associated

text: pda|henrykunerth@gmail.com

text: pda|henrykunerth@gmail.com

text: public

text: NCBI

text: SANFORD BEMIDJI MEDICAL CENTER

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: baseline surveillance (random sampling)


text: SARS-CoV-2: clinical or host-associated

text: pda|henrykunerth@gmail.com

text: pda|henrykunerth@gmail.com

text: public

text: NCBI

text: HEALTHEAST - ST JOHNS HOSPITAL

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx


text: SARS-CoV-2: clinical or host-associated

text: pda|henrykunerth@gmail.com

text: pda|henrykunerth@gmail.com

text: public

text: NCBI

text: CENTRACARE LABORATORY SERVICES

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: baseline surveillance (random sampling)


text: SARS-CoV-2: clinical or host-associated

text: pda|henrykunerth@gmail.com

text: pda|henrykunerth@gmail.com

text: public

text: NCBI

text: CHILDREN'S HOSPITAL AND CLINIC - MINNEAPOLIS

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: baseline surveillance (random sampling)


text: SARS-CoV-2: clinical or host-associated

text: pda|henrykunerth@gmail.com

text: pda|henrykunerth@gmail.com

text: public

text: NCBI

text: USA: Minnesota

text: Homo sapiens

text: nares

text: baseline surveillance (random sampling)


text: SARS-CoV-2: clinical or host-associated

text: pda|henrykunerth@gmail.com

text: pda|henrykunerth@gmail.com

text: public

text: NCBI

text: NORTH MEMORIAL HOSPITAL

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: baseline surveillance (random sampling)


text: SARS-CoV-2: clinical or host-associated

text: pda|henrykunerth@gmail.com

text: pda|henrykunerth@gmail.com

text: public

text: NCBI

text: CENTRACARE LABORATORY SERVICES

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx


text: SARS-CoV-2: clinical or host-associated

text: pda|henrykunerth@gmail.com

text: pda|henrykunerth@gmail.com

text: public

text: NCBI

text: RIDGEVIEW MEDICAL CENTER

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: baseline surveillance (random sampling)


text: SARS-CoV-2: clinical or host-associated

text: pda|henrykunerth@gmail.com

text: pda|henrykunerth@gmail.com

text: public

text: NCBI

text: MAPLE GROVE HOSPITAL

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: baseline surveillance (random sampling)


text: SARS-CoV-2: clinical or host-associated

text: pda|henrykunerth@gmail.com

text: pda|henrykunerth@gmail.com

text: public

text: NCBI

text: CARRIS HEALTH - RICE MEMORIAL HOSPITAL

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx


text: Model organism or animal

characteristic: CBP Individual ID

characteristic: CBP Sample ID

text: steller sea lion

characteristic: Common name

text: pup | Natoa

characteristic: External Sample ID

characteristic: GSC Sample ID

text: pda|samjones@bcgsc.ca

text: pda|samjones@bcgsc.ca

text: public

characteristic: Lab ID

characteristic: Sample derived from

characteristic: Sample derived from (CBP ID)

characteristic: ToLID

text: Vancouver Aquarium, Vancouver, British Columba Canada

text: NCBI

text: Martin Haulena, Vancouver, British Columba Canada

text: Steller sea lion

characteristic: common name

text: juvenile

text: Canada: Vancouver, British Columbia

text: healthy

text: aquarium

text: Eumetopias jubatus

text: blood

text: Eumetopias jubatus

text: male

characteristic: sex

text: 3mL blood EDTA collection tube; stored in -70C freezer

text: blood

characteristic: tissue

text: Blood from juvenile male Eumetopias jubatus (steller sea lion), StellerSeaLion01-CBP00866B/SJ_343: CBPint0042, mEumJub1

characteristic: title


text: Pathogen.env

characteristic: BioSampleModel

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: NCBI

characteristic: broker name

text: Stephen Cole

text: USA

text: canine

text: 39.95 N 75.16 W

text: Escherichia coli

text: Escherichia coli

characteristic: strain

text: WGS of Escherichia coli


text: Microbe, viral or environmental

text: pda|mdlwgs@cdph.ca.gov

text: pda|mdlwgs@cdph.ca.gov

text: public

text: NCBI

text: USA

text: Homo sapiens

characteristic: host

characteristic: isolate

text: Escherichia coli

characteristic: organism

text: whole organism

text: Escherichia coli

text: not applicable

text: Escherichia coli


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: SEARCH Alliance San Diego with Aaron Harding, Jacquelyn Berumen, Cathy Woerle, Liam McGinnis, Art Mendoza, Omid Bakhtar with the help of Sharp HealthCare Laboratory

text: not collected

text: USA: California, North America, San Diego

text: Homo sapiens

text: not collected

text: hcov-19 genomics

characteristic: title

text: not collected


text: SARS-CoV-2: clinical or host-associated

characteristic: BioSampleModel

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Chip Schooley, Natasha Martin, Cheryl Anderson, Angela Scioscia, Smruthi Karthikeyan, Greg Humphrey, Sawyer Farmer, Abigail Schnapper, Helena Tubb, Tommy Valles with SEARCH Alliance San Diego with the help of EXCITE Lab

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

characteristic: ENA-FIRST-PUBLIC

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: David Pride, Sharon Reed, Chip Schooley, Angela Scioscia, Natasha Martin Cheryl Anderson, Sawyer Farmer, Abigail Schnapper, Helena Tubb, Tommy Valles with SEARCH Alliance San Diego with the help of EXCITE Lab

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

characteristic: ENA-LAST-UPDATE

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: not collected

text: USA: California, North America, Imperial

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

characteristic: External Id

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: not collected

text: USA: California, North America, Riverside

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

characteristic: INSDC center alias

text: SEARCH

text: public

text: NCBI

text: not collected

text: USA: California, North America, Alameda

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

characteristic: INSDC center name

text: public

text: NCBI

text: not collected

text: USA: California, North America, Orange

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

characteristic: INSDC first public

text: public

text: NCBI

text: not collected

text: USA: California, North America, Los Angeles

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

characteristic: INSDC last update

text: public

text: NCBI

text: not collected

text: USA: California, North America, Napa

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

characteristic: INSDC status

text: NCBI

text: not collected

text: USA: California, North America, San Bernardino

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

characteristic: SRA accession

text: NCBI

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

characteristic: Submitter Id

text: NCBI

text: not collected

text: USA: California, North America, Placer

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

characteristic: broker name

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: not collected

text: USA: California, North America, Alameda

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Robert Tukey, Louise Laurent, Fatima Munos, Marva Seifert, Linda Salgin, Nicole Stadnick, Borsika Rabin, Paul Watson with SEARCH Alliance San Diego with the help of EXCITE Lab

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: San Diego County Public Health Laboratory

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: Severe acute respiratory syndrome coronavirus 2

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: USA: California, North America, Murrieta

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: SEARCH Alliance San Diego with Michael Quigley, Ellen Stefanski, Ian Mchardy with the help of Scripps Medical Laboratory

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: USA: California, North America, Alameda

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: USA: California, North America, Orange

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: USA: California, North America, Santa Clara

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: USA: California, North America, Alameda

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: USA: California, North America, Humboldt

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: USA: California, North America, RIverside

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: USA: California, North America, Monterey

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: SEARCH Alliance San Diego with Aaron Harding, Jacquelyn Berumen, Cathy Woerle, Liam McGinnis, Art Mendoza, Omid Bakhtar with the help of Sharp HealthCare Laboratory

text: Nasal swab

text: USA: California, North America, Inglewood

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: USA: California, North America, San Diego

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: USA: California, North America, Bellflower

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: USA: California, North America, Imperial

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: SEARCH Alliance San Diego with Abraham Campos Romero, Miguel A. Fernandez Rojas, Marco Antonio Luna Ruiz-Esparza, Jose Luis Moreno Camacho, Abraham Garcia Gil with the help of Salud Digna, A.C

text: Nasal swab

text: Mexico: North America, Coahuila,Torreon

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Mexico: North America, Coahuila,Saltillo

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Mexico: North America, Nuevo Leon,San Nicolas De Los Garza

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Mexico: North America, Nuevo Leon,Guadalupe

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Mexico: North America, Sinaloa,Culiacan

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: Pathogen.env

text: Sample name

text: Sample name

text: public

tag: Namespace:Sample name

text: NCBI

text: USDA-FSIS

text: USA:TX

text: comminuted beef

text: missing

text: Escherichia coli

text: Escherichia coli

characteristic: serotype

characteristic: strain

text: Pathogen: environmental/food/other sample from Escherichia coli


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Mexico: North America, Jalisco,Puerto Vallarta

text: Homo sapiens

characteristic: host

characteristic: isolate

text: nasal swab

text: Severe acute respiratory syndrome coronavirus 2

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Mexico: North America, Nuevo Leon,Santa Catarina

text: Homo sapiens

text: nasal swab

characteristic: organism

text: hcov-19 genomics

characteristic: title

text: not collected


text: SARS-CoV-2: clinical or host-associated

characteristic: BioSampleModel

characteristic: ENA-FIRST-PUBLIC

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Mexico: North America, Sinaloa,Los Mochis

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Mexico: North America, Sinaloa,Mazatlan

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

characteristic: INSDC center alias

text: SEARCH

characteristic: INSDC center name

text: public

text: NCBI

text: Nasal swab

text: Mexico: North America, Nuevo Leon,Monterrey

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: NCBI

text: Nasal swab

text: Mexico: North America, Jalisco,Guadalajara Tetlan

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

characteristic: INSDC status

characteristic: SRA accession

text: NCBI

text: Nasal swab

text: Mexico: North America, Baja California,Mexicali

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

characteristic: Submitter Id

text: NCBI

characteristic: broker name

text: Nasal swab

text: Mexico: North America, Baja California,Tijuana

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Mexico: North America, Chihuahua,Chihuahua

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Mexico: North America, Baja California,Ensenada

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Mexico: North America, Sonora,Hermosillo

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Mexico: North America, Coahuila,Torreon

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Mexico: North America, Sonora,Obregon

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Mexico: North America, Sinaloa,Culiacan

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Mexico: North America, Chihuahua,Ciudad Juarez

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: SEARCH Alliance San Diego with Aaron Harding, Jacquelyn Berumen, Cathy Woerle, Liam McGinnis, Art Mendoza, Omid Bakhtar with the help of Sharp HealthCare Laboratory

text: Nasal swab

text: USA: California, North America, San Diego

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: SEARCH Alliance San Diego with Abraham Campos Romero, Miguel A. Fernandez Rojas, Marco Antonio Luna Ruiz-Esparza, Jose Luis Moreno Camacho, Abraham Garcia Gil with the help of Salud Digna, A.C

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Mexico: North America, Sinaloa,Mazatlan

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Mexico: North America, Nuevo Leon,San Nicolas De Los Garza

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Mexico: North America, Coahuila,Saltillo

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: SEARCH Alliance San Diego with Michael Quigley, Ellen Stefanski, Ian Mchardy with the help of Scripps Medical Laboratory

text: Nasopharyngeal swab

text: Homo sapiens

text: nasopharyngeal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Oropharynx swab

text: Homo sapiens

text: Oropharynx swab

text: Severe acute respiratory syndrome coronavirus 2

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Mid-Turbinate swab

text: Homo sapiens

text: Mid-Turbinate swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Oropharynx

text: Homo sapiens

text: Oropharynx

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Mexico: North America, Sinaloa,Mazatlan

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Mexico: North America, Sinaloa,Culiacan

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Mexico: North America, Jalisco,Puerto Vallarta

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Mexico: North America, Coahuila,Torreon

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Mexico: North America, Nuevo Leon,Guadalupe

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Mid-Turbinate swab

text: Homo sapiens

text: Mid-Turbinate swab

text: hcov-19 genomics

text: Moderna


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasopharyngeal swab

text: Homo sapiens

text: nasopharyngeal swab

text: hcov-19 genomics

text: Pfizer


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Mid-Turbinate swab

text: Homo sapiens

text: Mid-Turbinate swab

text: hcov-19 genomics

text: Pfizer


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasopharyngeal swab

text: Homo sapiens

text: nasopharyngeal swab

text: hcov-19 genomics

text: Moderna


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Mexico: North America, Nuevo Leon,Monterrey

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Mexico: North America, Sonora,Obregon

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Mexico: North America, Sinaloa,Los Mochis

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Mexico: North America, Nuevo Leon,Santa Catarina

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Mexico: North America, Baja California,Mexicali

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: SEARCH Alliance San Diego with Ashleigh Murphy, Brett Austin with the help of San Diego County Public Health Laboratory

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Oropharynx swab

text: Homo sapiens

text: Oropharynx swab

text: hcov-19 genomics

text: Pfizer


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Oropharynx swab swab

text: Homo sapiens

text: Oropharynx swab swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasopharyngeal swab

text: Homo sapiens

text: nasopharyngeal swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasopharyngeal swab

text: Homo sapiens

text: nasopharyngeal swab

text: hcov-19 genomics

text: Pfizer


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasopharyngeal swab

text: Homo sapiens

text: nasopharyngeal swab

text: hcov-19 genomics

text: Johnson & Johnson


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Oropharynx swab

text: Homo sapiens

text: Oropharynx swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Oropharynx swab

text: Homo sapiens

text: Oropharynx swab

text: hcov-19 genomics

text: Moderna


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Mid-Turbinate swab

text: Homo sapiens

text: Mid-Turbinate swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Oropharynx swab

text: Homo sapiens

text: Oropharynx swab

text: hcov-19 genomics

text: Johnson & Johnson


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasopharyngeal swab

text: Homo sapiens

text: nasopharyngeal swab

text: hcov-19 genomics

text: Moderna


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasopharyngeal swab swab

text: Homo sapiens

text: Nasopharyngeal swab swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Mid-Turbinate swab swab

text: Homo sapiens

text: Mid-Turbinate swab swab

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Oropharynx swab swab

text: Homo sapiens

text: Oropharynx swab swab

text: hcov-19 genomics

text: Pfizer


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Nasopharyngeal swab swab

text: Homo sapiens

text: Nasopharyngeal swab swab

text: hcov-19 genomics

text: Moderna


text: SARS-CoV-2: clinical or host-associated

text: SEARCH

text: SEARCH

text: public

text: NCBI

text: Mid-Turbinate swab

text: Homo sapiens

text: Mid-Turbinate swab

text: hcov-19 genomics

text: Pfizer


text: Pathogen.cl

text: public

text: NCBI

text: Florida Bureau of Public Health Laboratories

text: USA: Florida

text: Homo sapiens

text: Health care-associated infection

text: clinical

text: Homo Sapiens clinical

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa


text: Pathogen.cl

text: public

text: NCBI

text: USA: Florida

text: Homo sapiens

text: Health care-associated infection

text: clinical

text: Homo Sapiens clinical

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: Pathogen.env

text: NARMS

text: NARMS

text: public

text: NCBI

text: MO

text: USA:MO

text: missing

text: missing

text: shrimp

text: missing

text: Vibrio parahaemolyticus

text: Vibrio parahaemolyticus

text: missing

characteristic: serovar

characteristic: strain

text: Vibrio parahaemolyticus


text: Pathogen.cl

text: pda|davmoline@ochca.com

text: pda|davmoline@ochca.com

text: public

characteristic: MLST

text: NCBI

text: Orange County Public Health Lab

text: USA

text: Homo sapiens

characteristic: host

text: missing

text: missing

characteristic: isolate

text: sputum

text: missing

text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: missing


text: Pathogen.cl

characteristic: BioSampleModel

text: pda|davmoline@ochca.com

text: pda|davmoline@ochca.com

text: public

text: NCBI

text: Orange County Public Health Lab

text: USA

text: Homo sapiens

text: missing

text: missing

text: skin (R stump)

text: missing

text: Acinetobacter baumannii

characteristic: organism

text: Acinetobacter baumannii

text: missing


text: Pathogen.cl

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: pda|davmoline@ochca.com

text: pda|davmoline@ochca.com

text: public

text: NCBI

text: Orange County Public Health Lab

text: USA

text: Homo sapiens

text: missing

text: missing

text: sputum

text: missing

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa

text: missing


text: Pathogen.cl

characteristic: External Id

text: EDLB-CDC

characteristic: INSDC center alias

text: EDLB-CDC

text: public

text: NCBI

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Vibrio parahaemolyticus

text: PulseNet

text: Vibrio parahaemolyticus

text: missing

text: missing

text: human

text: Vibrio parahaemolyticus

characteristic: title


text: Microbe, viral or environmental

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: MLST198 PubMLST

text: NCBI

text: USA

text: Homo sapiens

text: foot

text: Pseudomonas aeruginosa

text: whole organism

text: Pseudomonas aeruginosa


text: Microbe, viral or environmental

text: public

characteristic: INSDC status

text: MLST147 Pasteur

characteristic: SRA accession

characteristic: Submitter Id

text: NCBI

text: USA

text: Homo sapiens

text: urine

text: Klebsiella pneumoniae

text: whole organism

text: Klebsiella pneumoniae


text: Microbe, viral or environmental

text: public

text: MLST2 Pasteur

text: NCBI

characteristic: broker name

text: USA

text: Homo sapiens

text: tracheal

text: Acinetobacter baumannii

text: whole organism

text: Acinetobacter baumannii


text: Microbe, viral or environmental

text: public

text: MLST2 Pasteur

characteristic: MLST

text: NCBI

text: USA

text: Homo sapiens

text: sputum

text: Acinetobacter baumannii

text: whole organism

text: Acinetobacter baumannii


text: Microbe, viral or environmental

text: public

text: MLST69 Achtman

text: NCBI

text: USA

text: Homo sapiens

characteristic: host

text: urine

text: Escherichia coli

text: whole organism

text: Escherichia coli


text: Microbe, viral or environmental

text: public

text: MLST773 PubMLST

text: NCBI

text: USA

text: Homo sapiens

characteristic: isolate

text: urine

text: Pseudomonas aeruginosa

text: whole organism

text: Pseudomonas aeruginosa


text: Microbe, viral or environmental

characteristic: BioSampleModel

text: public

text: Novel_allele Pasteur

text: NCBI

text: USA

text: Homo sapiens

text: urine

text: Klebsiella pneumoniae

text: whole organism

text: Klebsiella pneumoniae


text: Microbe, viral or environmental

text: public

text: MLST357 Achtman

text: NCBI

text: USA

text: Homo sapiens

text: urine

text: Escherichia coli

characteristic: organism

text: whole organism

text: Escherichia coli


text: Microbe, viral or environmental

characteristic: ENA-FIRST-PUBLIC

text: public

text: MLST147 Pasteur

text: NCBI

text: USA

text: Homo sapiens

text: sputum

text: Klebsiella pneumoniae

text: whole organism

text: Klebsiella pneumoniae


text: Microbe, viral or environmental

characteristic: ENA-LAST-UPDATE

text: public

text: MLST15 Pasteur

text: NCBI

text: USA

text: Homo sapiens

text: groin

text: Acinetobacter baumannii

text: whole organism

text: Acinetobacter baumannii


text: Microbe, viral or environmental

characteristic: External Id

text: public

text: MLST2 Pasteur

text: NCBI

text: USA

text: Homo sapiens

text: groin

text: Acinetobacter baumannii

text: whole organism

text: Acinetobacter baumannii


text: Microbe, viral or environmental

characteristic: INSDC center alias

text: public

text: MLST298 PubMLST

text: NCBI

text: USA

text: Homo sapiens

text: urine

text: Pseudomonas aeruginosa

text: whole organism

text: Pseudomonas aeruginosa


text: Microbe, viral or environmental

text: public

text: MLST164 Pasteur

text: NCBI

text: USA

text: Homo sapiens

text: groin

text: Acinetobacter baumannii

text: whole organism

text: Acinetobacter baumannii


text: Microbe, viral or environmental

text: public

text: MLST250 Pasteur

text: NCBI

text: USA

text: Homo sapiens

text: groin

text: Acinetobacter baumannii

text: whole organism

text: Acinetobacter baumannii


text: Microbe, viral or environmental

text: public

text: MLST78 Pasteur

text: NCBI

text: USA

text: Homo sapiens

text: groin

text: Acinetobacter baumannii

text: whole organism

text: Acinetobacter baumannii


text: Microbe, viral or environmental

text: public

text: MLST2276 PubMLST

text: NCBI

text: USA

text: Homo sapiens

text: culture

text: Staphylococcus aureus

text: whole organism

text: Staphylococcus aureus


text: Model organism or animal

characteristic: CBP Individual ID

characteristic: CBP Sample ID

text: winter skate

characteristic: Common name

text: LOcellata_Specimen2 | R-41231-L

characteristic: External Sample ID

text: pda|samjones@bcgsc.ca

text: pda|samjones@bcgsc.ca

text: public

text: Jamie Emberley, Bedford Institute of Oceanography, Fisheries and Oceans Canada

characteristic: Identified by

characteristic: Lab ID

characteristic: Sample derived from

characteristic: ToLID

text: Fisheries and Oceans Canada, Government of Canada

text: NCBI

text: Bedford Institute of Oceanography-Bedford Institute of Oceanography, Dartmouth, NS, Canada

text: winter skate

characteristic: common name

text: adult

text: Canada: Nova Scotia, Scotian Shelf, Atlantic Ocean

text: Benthic ocean; open ocean

text: Leucoraja ocellata

text: tissue

text: Leucoraja ocellata

text: male

characteristic: sex

text: liver in RNAlater, frozen

text: liver

characteristic: tissue

text: Liver tissue from adult male Leucoraja ocellata (winter skate) WinterSkate03-CBP00326: CBPint0029, sLeuOce1

characteristic: title


text: Pathogen.cl

characteristic: BioSampleModel

text: EDLB-CDC

text: EDLB-CDC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: NCBI

characteristic: broker name

text: CDC

text: USA

text: missing

characteristic: host

text: missing

text: missing

characteristic: isolate

text: missing

text: missing

text: missing

text: Vibrio cholerae

characteristic: organism

text: PulseNet

text: Vibrio cholerae

text: missing

text: missing

characteristic: serovar

text: human

characteristic: strain

text: Vibrio cholerae


text: Pathogen.cl

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EDLB-CDC

characteristic: INSDC center alias

text: EDLB-CDC

text: public

text: NCBI

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Vibrio parahaemolyticus

text: PulseNet

text: Vibrio parahaemolyticus

text: missing

text: missing

text: human

text: Vibrio parahaemolyticus


text: SARS-CoV-2: clinical or host-associated

characteristic: BioSampleModel

text: pda|txdshs

text: pda|txdshs

text: public

text: NCBI

text: Texas Department of State Health Services

text: USA: Texas

text: Homo sapiens

text: male

text: missing

text: Anterior Nasal Swab

text: missing

text: TXDSHS


text: SARS-CoV-2: clinical or host-associated

text: pda|txdshs

text: pda|txdshs

characteristic: INSDC center name

text: public

text: NCBI

text: USA: Texas

text: Homo sapiens

text: female

text: missing

text: Anterior Nasal Swab

text: missing

text: TXDSHS


text: Pathogen.cl

text: EDLB-CDC

text: EDLB-CDC

characteristic: INSDC first public

text: public

text: NCBI

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Vibrio vulnificus

text: PulseNet

text: Vibrio vulnificus

text: missing

text: missing

text: human

text: Vibrio vulnificus

characteristic: title


text: Pathogen.cl

text: EDLB-CDC

text: EDLB-CDC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: NCBI

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Vibrio fluvialis

text: PulseNet

text: Vibrio fluvialis

text: missing

text: missing

text: human

text: Vibrio fluvialis


text: public

characteristic: SRA accession

characteristic: Submitter Id

text: NCBI

text: missing

text: goat

characteristic: common name

text: missing

text: Capra hircus

text: Capra hircus

text: ileal contents

text: Day 13

characteristic: time

text: ileal contents

characteristic: tissue

text: infusion of sodium butyrate

characteristic: treatment


text: public

text: NCBI

characteristic: broker name

text: missing

text: goat

text: missing

text: Capra hircus

characteristic: organism

text: Capra hircus

text: ileal contents

text: Day 13

text: ileal contents

text: infusion of sodium propionate


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: NCBI

text: missing

text: goat

text: missing

text: Capra hircus

text: Capra hircus

text: ileal contents

text: Day 13

text: ileal contents

text: infusion of sodium acetate


characteristic: External Id

text: public

text: NCBI

text: missing

text: goat

text: missing

text: Capra hircus

text: Capra hircus

text: ileal contents

text: Day 13

text: ileal contents

text: infusion of normal saline


text: Model organism or animal

characteristic: BioSampleModel

characteristic: CBP Individual ID

characteristic: CBP Lab ID

characteristic: CBP Sample ID

text: turban barnacle

characteristic: Common name

text: TurBarn_2022_1 | DFO23_CBP_0017

characteristic: External Sample ID

text: pda|samjones@bcgsc.ca

characteristic: INSDC center alias

text: pda|samjones@bcgsc.ca

text: public

characteristic: Identified by

characteristic: Sample derived from

characteristic: Sample derived from (CBP ID)

characteristic: ToLID

text: NCBI

text: Bedford Institute of Oceanography, Dartmouth, NS Canada

text: adult

text: Canada: Scotian Shelf, Atlantic Ocean

characteristic: isolate

text: Benthic ocean; Open ocean

text: Chirona hameri

text: tissue sample

text: Chirona hameri

text: hermaphrodite

characteristic: sex

text: flash frozen tissue stored in freezer

text: legs

text: Legs of adult hermaphrodite Chirona hameri (turban barnacle) TurbanBarnacle01-CBP00353B/D/E: CBPint0030, qxChiHame1


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: NCBI

characteristic: broker name

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

characteristic: host

text: infection

text: Respiratory, Lower, Endotracheal

text: 34.05465048 N 118.46330143 W

text: Burkholderia cepacia

characteristic: organism

text: Burkholderia cepacia

characteristic: strain


text: Pathogen.cl

characteristic: BioSampleModel

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: pda|reiri.sono@gmail.com

characteristic: INSDC center alias

text: pda|reiri.sono@gmail.com

text: public

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: blood

text: 34.05465048 N 118.46330143 W

text: Leptotrichia trevisanii

text: Leptotrichia trevisanii


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

text: public

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

characteristic: isolate

text: urine

text: 34.05465048 N 118.46330143 W

text: Ureaplasma parvum

text: Ureaplasma parvum

text: serovar 3


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

text: public

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: Blood, Peripheral Vein

text: 34.05465048 N 118.46330143 W

text: Citrobacter amalonaticus

text: Citrobacter amalonaticus


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

text: public

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: Swab, Surgical, Chest

text: 34.05465048 N 118.46330143 W

text: Metamycoplasma hominis

text: Metamycoplasma hominis


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

text: public

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: Body Fluid, Pleural Fluid, Left

text: 34.05465048 N 118.46330143 W

text: Metamycoplasma hominis

text: Metamycoplasma hominis


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

text: public

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: Tissue, Chest Wall

text: 34.05465048 N 118.46330143 W

text: Metamycoplasma hominis

text: Metamycoplasma hominis


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

text: public

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: CSF

text: 34.05465048 N 118.46330143 W

text: Coccidioides immitis

text: Coccidioides immitis


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

text: public

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: Blood, Central Line

text: 34.05465048 N 118.46330143 W

text: Christensenella hongkongensis

text: Christensenella hongkongensis


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

text: public

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: Blood culture isolate Centinella Referral

text: 34.05465048 N 118.46330143 W

text: Ignatzschineria indica

text: Ignatzschineria indica

text: type strain of Ignatzschineria indica

characteristic: type-material


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

characteristic: INSDC center name

text: public

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: Blood, Peripheral Vein

text: 34.05465048 N 118.46330143 W

text: Thiopseudomonas alkaliphila

text: Thiopseudomonas alkaliphila


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

characteristic: INSDC first public

text: public

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: Respiratory, Lower, Bronchoalveolar Lavage

text: 34.05465048 N 118.46330143 W

text: Metamycoplasma hominis

text: Metamycoplasma hominis


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

characteristic: INSDC last update

text: public

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: CAP Survey Lower Respiratory CF CX

text: 34.05465048 N 118.46330143 W

text: Lautropia mirabilis

text: Lautropia mirabilis

text: type strain of Lautropia mirabilis


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

text: public

characteristic: INSDC status

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: Tissue, Lung, Left Lower Lobe

text: 34.05465048 N 118.46330143 W

text: Enterococcus faecalis

text: Enterococcus faecalis


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

text: public

characteristic: SRA accession

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: Nocardia Culture Tissue, Bronchus Collected 2/8/2021 1152

text: 34.05465048 N 118.46330143 W

text: Methylorubrum populi

text: Methylorubrum populi


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

text: public

characteristic: Submitter Id

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: Nocardia Culture Bronchoalveolar Lavage Collected 2/10/2021 1142

text: 34.05465048 N 118.46330143 W

text: Nocardia wallacei

text: Nocardia wallacei


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

text: public

text: NCBI

characteristic: broker name

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: Blood, Peripheral Vein #2 Collected 2/6/2021 2017

text: 34.05465048 N 118.46330143 W

text: Dolosigranulum pigrum

text: Dolosigranulum pigrum


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

text: public

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

characteristic: host

text: infection

text: Nocardia Culture Isolate Collected 2/15/2021 1030

text: 34.05465048 N 118.46330143 W

text: Nocardia wallacei

text: Nocardia wallacei


text: Pathogen.cl

text: NARMS_CA-Contra Costa

text: NARMS_CA-Contra Costa

text: public

tag: Namespace:NARMS_CA-Contra Costa

text: NCBI

text: CA-Contra Costa

text: USA:CA

text: Chicken

text: Campylobacteriosis

text: CHICKEN HEART

text: Environmental

text: missing

text: Campylobacter coli

characteristic: organism

text: Campylobacter coli


text: Pathogen.cl

text: NARMS_CA-Contra Costa

text: NARMS_CA-Contra Costa

text: public

text: NCBI

text: CA-Contra Costa

text: USA:CA

text: Chicken

text: Campylobacteriosis

text: CHICKEN GIZZARD

text: Environmental

text: missing

text: Campylobacter jejuni

text: Campylobacter jejuni

characteristic: strain


text: Pathogen.cl

characteristic: BioSampleModel

text: NARMS_CA-Contra Costa

text: NARMS_CA-Contra Costa

text: public

text: NCBI

text: CA-Contra Costa

text: USA:CA

text: Chicken

text: Campylobacteriosis

text: CHICKEN BREASTS

text: Environmental

text: missing

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Pathogen.cl

characteristic: ENA-FIRST-PUBLIC

text: NARMS_CA-Contra Costa

text: NARMS_CA-Contra Costa

text: public

text: NCBI

text: CA-Contra Costa

text: USA:CA

text: Chicken

text: Campylobacteriosis

text: CHICKEN LIVER

text: Environmental

text: missing

text: Campylobacter coli

text: Campylobacter coli


text: Pathogen.cl

characteristic: ENA-LAST-UPDATE

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

text: public

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: 34.05465048 N 118.46330143 W

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis


text: Pathogen.cl

characteristic: External Id

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

text: public

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: 34.05465048 N 118.46330143 W

text: Nocardia wallacei

text: Nocardia wallacei


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

characteristic: INSDC center alias

text: pda|reiri.sono@gmail.com

text: public

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: Blood Collected 8/29/2021 0910

text: 34.05465048 N 118.46330143 W

text: Bacillus cereus

text: Bacillus cereus


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

text: public

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

characteristic: isolate

text: Blood, Peripheral Vein Collected 9/6/2021

text: 34.05465048 N 118.46330143 W

text: Aeromonas veronii

text: Aeromonas veronii


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

text: public

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: 34.05465048 N 118.46330143 W

text: Burkholderia cenocepacia

text: Burkholderia cenocepacia


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

text: public

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: Urine, Urine, voided

text: 34.05465048 N 118.46330143 W

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

text: public

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: Blood, Peripheral Vein

text: 34.05465048 N 118.46330143 W

text: Mycobacterium colombiense CECT 3035

text: Mycobacterium colombiense CECT 3035

text: CECT 3035

text: type strain of Mycobacterium colombiense

characteristic: type-material


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

characteristic: INSDC center name

text: public

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: Respiratory, Lower, Sputum-Expectorated

text: 34.05465048 N 118.46330143 W

text: Mycobacterium simiae

text: Mycobacterium simiae


text: Pathogen.cl

text: pda|aseree@uw.edu

text: pda|aseree@uw.edu

characteristic: INSDC first public

text: public

text: NCBI

text: UW Medicine

text: USA

text: Homo sapiens

text: not collected

text: Lesion swab

text: 47.6062 N 122.3321 W

text: Monkeypox virus

text: Monkeypox virus


text: Metagenome or environmental

characteristic: INSDC last update

text: public

text: NCBI

text: Costa Rica: San Vito

text: Utricularia jamesoniana

text: Bladder

text: 8.78527777 N 82.95888888 W

text: metagenome

text: biological replicate 1

characteristic: replicate

text: metagenome

text: 16S rRNA sequences of bladder of Utricularia jamesoniana:bladder1_16S

characteristic: title


text: Metagenome or environmental

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: NCBI

text: Costa Rica: San Vito

text: Utricularia jamesoniana

text: Bladder

text: 8.78527777 N 82.95888888 W

text: metagenome

text: biological replicate 2

text: metagenome

text: 16S rRNA sequences of bladder of Utricularia jamesoniana:bladder2_16S


text: Metagenome or environmental

text: public

text: NCBI

characteristic: broker name

text: Costa Rica: San Vito

text: Utricularia jamesoniana

characteristic: host

text: leaf

text: 8.78527777 N 82.95888888 W

text: metagenome

characteristic: organism

text: biological replicate 3

text: metagenome

text: 16S rRNA sequences of leaf of Utricularia jamesoniana: leaf1_16S


text: Metagenome or environmental

characteristic: BioSampleModel

characteristic: ENA-FIRST-PUBLIC

text: public

text: NCBI

text: Costa Rica: San Vito

text: Utricularia jamesoniana

text: leaf

text: 8.78527777 N 82.95888888 W

text: metagenome

text: biological replicate 4

text: metagenome

text: 16S rRNA sequences of leaf of Utricularia jamesoniana:leaf2_16S


text: Metagenome or environmental

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: NCBI

text: Costa Rica: San Vito

text: Utricularia jamesoniana

text: Bladder

text: 8.78527777 N 82.95888888 W

text: metagenome

text: biological replicate 5

text: metagenome

text: ITS sequences of bladder of Utricularia jamesoniana:bladder1_ITS


text: Metagenome or environmental

characteristic: INSDC center alias

text: public

text: NCBI

text: Costa Rica: San Vito

text: Utricularia jamesoniana

text: Bladder

text: 8.78527777 N 82.95888888 W

text: metagenome

text: biological replicate 6

text: metagenome

text: ITS sequences of bladder of Utricularia jamesoniana:bladder2:ITS


text: Metagenome or environmental

text: public

text: NCBI

text: Costa Rica: San Vito

text: Utricularia jamesoniana

text: leaf

text: 8.78527777 N 82.95888888 W

text: metagenome

text: biological replicate 7

text: metagenome

text: ITS sequences of leaf of Utricularia jamesoniana:leaf1_ITS


text: Metagenome or environmental

text: public

text: NCBI

text: Costa Rica: San Vito

text: Utricularia jamesoniana

text: leaf

text: 8.78527777 N 82.95888888 W

text: metagenome

text: biological replicate 8

text: metagenome

text: ITS sequences of leaf of Utricularia jamesoniana:leaf2_ITS


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

text: public

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

characteristic: isolate

text: 34.05465048 N 118.46330143 W

text: Aspergillus terreus

text: Aspergillus terreus

text: ATCC 1012

characteristic: strain

text: culture from lectotype of Aspergillus terreus

characteristic: type-material


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: Respiratory, Lower, Sputum-Expectorated

text: 34.05465048 N 118.46330143 W

text: Papiliotrema laurentii

text: Papiliotrema laurentii


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

text: public

characteristic: INSDC status

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: Blood, peripheral

text: 34.05465048 N 118.46330143 W

text: Candida dubliniensis

text: Candida dubliniensis

text: CBS 7987

text: culture from type material of Candida dubliniensis


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

text: public

characteristic: SRA accession

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: Respiratory, Lower, Sputum-Induced

text: 34.05465048 N 118.46330143 W

text: Meyerozyma caribbica

text: Meyerozyma caribbica

text: CBS 5256


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

text: public

characteristic: Submitter Id

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: Respiratory, Lower, Sputum-induced

text: 34.05465048 N 118.46330143 W

text: Meyerozyma caribbica

text: Meyerozyma caribbica

text: CBS 5256


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

text: public

text: NCBI

characteristic: broker name

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: Nails, Finger

text: 34.05465048 N 118.46330143 W

text: Meyerozyma caribbica

text: Meyerozyma caribbica

text: CBS 5256


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

text: public

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

characteristic: host

text: infection

text: Wound, Chest

text: 34.05465048 N 118.46330143 W

text: Aspergillus fumigatus

text: Aspergillus fumigatus

text: ATCC 1022

text: culture from type material of Aspergillus fumigatus


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

text: public

text: NCBI

text: UCLA Health

text: not provided

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: Reference Isolate

text: 34.05465048 N 118.46330143 W

text: Penicillium solitum

characteristic: organism

text: Penicillium solitum

text: CBS 487


text: Pathogen.cl

characteristic: BioSampleModel

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

text: public

text: NCBI

text: UCLA Health

text: not provided

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: Reference Isolate

text: 34.05465048 N 118.46330143 W

text: Curvularia lunata

text: Curvularia lunata

text: CBS 730.96

text: culture from neotype of Curvularia lunata


text: Pathogen.cl

characteristic: ENA-FIRST-PUBLIC

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

text: public

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: Tissue, Lymph Node

text: 34.05465048 N 118.46330143 W

text: Histoplasma capsulatum

text: Histoplasma capsulatum


text: Pathogen.cl

characteristic: ENA-LAST-UPDATE

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

text: public

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: Endotracheal

text: 34.05465048 N 118.46330143 W

text: Magnusiomyces capitatus

text: Magnusiomyces capitatus


text: Pathogen.cl

characteristic: External Id

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

text: public

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: Tissue, Lung, Right Lower Lobe Fungal culture isolate Collected 5/28/2021 1336

text: 34.05465048 N 118.46330143 W

text: Aspergillus pseudoterreus

text: Aspergillus pseudoterreus

text: NRRL 4017

text: culture from holotype of Aspergillus pseudoterreus


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

characteristic: INSDC center alias

text: pda|reiri.sono@gmail.com

text: public

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: Lesion, Leg Fungal culture isolate Collected 5/7/2021 0922

text: 34.05465048 N 118.46330143 W

text: Trichophyton rubrum

text: Trichophyton rubrum

text: CBS 392.58

text: culture from neotype of Epidermophyton rubrum


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

text: public

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

characteristic: isolate

text: Respiratory, Lower, Bronchoalveolar Lavage

text: 34.05465048 N 118.46330143 W

text: Aspergillus pseudoterreus

text: Aspergillus pseudoterreus

text: NRRL 4017


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

text: public

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: Respiratory, Lower, Sputum-Expectorated

text: 34.05465048 N 118.46330143 W

text: Phanerochaete concrescens

text: Phanerochaete concrescens

text: H Spirin 7322

characteristic: strain

text: isotype of Phanerochaete concrescens


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

text: public

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: Body Fluid, Peritoneal Dialysate

text: 34.05465048 N 118.46330143 W

text: Phaeoacremonium angustius

text: Phaeoacremonium angustius

text: CBS 249.95

text: holotype of Phaeoacremonium angustius

characteristic: type-material


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

characteristic: INSDC center name

text: public

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: Blood, Peripheral Vein

text: 34.05465048 N 118.46330143 W

text: Beauveria brongniartii

text: Beauveria brongniartii

text: ARSEF 617

text: culture from type material of Cordyceps brongniartii


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

characteristic: INSDC first public

text: public

text: NCBI

text: UCLA Health

text: Fusarium solani species complex 6

characteristic: common name

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: Blood Culture

text: 34.05465048 N 118.46330143 W

text: Fusarium metavorans

text: Fusarium metavorans

text: CBS 135789

text: culture from holotype of Fusarium metavorans


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: Tissue, Leg, Left

text: 34.05465048 N 118.46330143 W

text: Arthrographis kalrae

text: Arthrographis kalrae


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: right mandible

text: 34.05465048 N 118.46330143 W

text: Arthrographis kalrae

text: Arthrographis kalrae


text: Pathogen.cl

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

text: public

text: NCBI

characteristic: broker name

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

characteristic: host

text: infection

text: Nails, Finger

text: 34.05465048 N 118.46330143 W

text: Chaetomium elatum

text: Chaetomium elatum


text: Pathogen.cl

characteristic: BioSampleModel

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

text: public

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: Respiratory, Lower, Sputum-Expectorated

text: 34.05465048 N 118.46330143 W

text: Aspergillus terreus

characteristic: organism

text: Aspergillus terreus

text: ATCC 1012


text: Pathogen.cl

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: pda|reiri.sono@gmail.com

text: pda|reiri.sono@gmail.com

text: public

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: Respiratory, Lower, Tracheal Aspirate

text: 34.05465048 N 118.46330143 W

text: Aspergillus lentulus

text: Aspergillus lentulus

text: NRRL 35552

text: culture from type material of Aspergillus lentulus


text: Pathogen.cl

characteristic: External Id

text: pda|reiri.sono@gmail.com

characteristic: INSDC center alias

text: pda|reiri.sono@gmail.com

text: public

text: NCBI

text: UCLA Health

text: USA: California,Los Angeles

text: Homo sapiens

text: infection

text: Urine, Catheterized-Foley

text: 34.05465048 N 118.46330143 W

text: Nakaseomyces glabratus

text: Nakaseomyces glabratus

text: NRRL Y-65

text: type material of Cryptococcus glabratus


text: Model organism or animal

text: pda|fefeboca@gmail.com

text: pda|fefeboca@gmail.com

text: public

text: 'missing'

characteristic: age

text: 'not applicable'

characteristic: breed

text: NCBI

text: red-browed parrot

text: 'not applicable'

characteristic: cultivar

text: 'not applicable'

text: 'not applicable'

characteristic: ecotype

text: Brazil: Espirito Santo

text: 'missing'

characteristic: isolate

text: Amazona rhodocorytha

text: Amazona rhodocorytha

text: female

characteristic: sex

text: rhodocorytha

characteristic: strain

text: muscle tissue

characteristic: tissue

text: Amazona rhodocorytha UCEs

characteristic: title


text: Model organism or animal

text: pda|fefeboca@gmail.com

text: pda|fefeboca@gmail.com

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 'missing'

text: 'not applicable'

text: NCBI

characteristic: broker name

text: red-browed parrot

characteristic: common name

text: 'not applicable'

text: 'not applicable'

text: 'not applicable'

text: Brazil: Espirito Santo

text: 'missing'

text: Amazona rhodocorytha

text: Amazona rhodocorytha

text: male

text: rhodocorytha

text: muscle tissue

text: Amazona rhodocorytha UCEs


Control

text: Metagenome or environmental

characteristic: BioSampleModel

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center alias

text: public

text: Control

text: NCBI

text: control

characteristic: description

text: China: Xinxiang

text: Homo sapiens

characteristic: host

text: WAS fermentation reactor_control

text: 35.18 N 113.52 E

text: sludge metagenome

characteristic: organism

text: sludge metagenome


text: Metagenome or environmental

text: public

text: NCBI

text: sample with 5% ADC dosage

text: China: Xinxiang

text: Homo sapiens

text: WAS fermentation reactor_ADC5

text: 35.18 N 113.52 E

text: sludge metagenome

text: sludge metagenome


text: Metagenome or environmental

text: public

text: NCBI

text: sample with 10% ADC dosage

text: China: Xinxiang

text: Homo sapiens

text: WAS fermentation reactor_ADC10

text: 35.18 N 113.52 E

text: sludge metagenome

text: sludge metagenome


text: Metagenome or environmental

text: public

text: NCBI

text: sample with 20% ADC dosage

text: China: Xinxiang

text: Homo sapiens

text: WAS fermentation reactor_ADC20

text: 35.18 N 113.52 E

text: sludge metagenome

text: sludge metagenome


TDC-Control

text: Metagenome or environmental

text: public

text: TDC-Control

text: NCBI

text: control

text: China: Xinxiang

text: Homo sapiens

text: WAS fermentation reactor_TDC_control

text: 35.18 N 113.52 E

text: sludge metagenome

text: sludge metagenome