text: colon distal from a male texel x blackface lamb at birth, OAR_RI_L1

text: neonate

text: fasted

text: normal

text: specimen from organism

text: Ovis aries

text: descending colon

text: FAANG

text: Roslin Sheep Atlas


status: PUBLIC

characteristic: SRA accession

text: Horse

characteristic: common name

text: pearl (progressive greying over time)

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

text: Equus caballus

characteristic: organism

text: Equus caballus

characteristic: scientific name

text: Characterization of the pearl mutation in horses

characteristic: submission description

characteristic: submission identifier

text: Horse pearl coat genetic variant

characteristic: submission title

type: has member

Genetic Service

Address: Av. Puerta de Hierro s/n, 28040, Madrid, Spain

Natalia Sevane

FirstName: Natalia

LastName: Sevane

Susana Dunner

FirstName: Susana

LastName: Dunner


text: Horse

text: perlino like (progressive greying over time)

text: Spain

text: Equus caballus

text: Equus caballus

text: Horse pearl coat genetic variant


text: Horse

text: black

text: Spain

text: Equus caballus

text: Equus caballus

text: Horse pearl coat genetic variant


text: Horse

text: chestnut/sorrel

text: Spain

text: Equus caballus

text: Equus caballus

text: Horse pearl coat genetic variant


text: Horse

text: chestnut/sorrel (progressive greying over time)

text: Spain

text: Equus caballus

text: Equus caballus

text: Horse pearl coat genetic variant


text: Horse

text: pearl

text: Spain

text: Equus caballus

text: Equus caballus

text: Horse pearl coat genetic variant


text: Horse

text: cremello like

text: Spain

text: Equus caballus

text: Equus caballus

text: Horse pearl coat genetic variant


text: Horse

text: bay

text: Spain

text: Equus caballus

text: Equus caballus

text: Horse pearl coat genetic variant


text: Horse

text: perlino like

text: Spain

text: Equus caballus

text: Equus caballus

text: Horse pearl coat genetic variant


text: Horse

text: bay (progressive greying over time)

text: Spain

text: Equus caballus

text: Equus caballus

text: Horse pearl coat genetic variant


text: DOG

text: Dachshound

text: Canis lupus familiaris

text: Canis lupus familiaris

text: female

characteristic: sex

characteristic: subject

text: Whole-genome sequencing data were investigated for ectodysplasin A in dogs.

text: Ectodysplasin A in dogs

Name: Institute of Animal Breeding and Genetics:University of Veterinary Medicine, Foundation

Address: Buenteweg 17p, 30559 Hannover

Distl Ottmar

FirstName: Distl

LastName: Ottmar

Metzger Julia

FirstName: Metzger

LastName: Julia

Vasiliadis Danae

FirstName: Vasiliadis

LastName: Danae


text: DOG

text: Dachshound

text: Canis lupus familiaris

text: Canis lupus familiaris

text: male

text: Ectodysplasin A in dogs


text: leukocyte

characteristic: cell type

text: blood leukocytes from an adult female TxBF sheep

text: cell specimen

characteristic: material

text: Ovis aries

text: mixed sample

text: FAANG

characteristic: project

text: https://data.faang.org/api/fire_api/samples/ ROSLIN_SOP_Blood Leukocyte Isolation_20160503.pdf

characteristic: purification protocol

text: The Roslin Institute Sheep Gene Expression Atlas Project

text: Roslin Sheep Atlas

type: derived from

BBSRC

Role: funder

Address: Polaris House, North Star Avenue, Swindon, Wiltshire, SN2 1UH

EMBL-EBI

Role: curator

Address: Wellcome Genome Campus, Hinxton, Cambridge, CB10 1SD, United Kingdom

Name: The Roslin Institute and Royal Dick School of Veterinary Studies

Role: biomaterial provider

Address: Easter Bush Campus, Edinburgh, Midlothian, EH25 9RG

Role: institution

Alan Archibald

FirstName: Alan

LastName: Archibald

MidInitials: L

Role: Investigator

Bruce Whitelaw

FirstName: Bruce

LastName: Whitelaw

MidInitials: C

David Hume

FirstName: David

LastName: Hume

MidInitials: A

Emily Clark

FirstName: Emily

LastName: Clark

Role: experiment performer

Role: submitter

Kim Summers

FirstName: Kim

LastName: Summers

MidInitials: M

Mary McCulloch

FirstName: Mary

LastName: McCulloch

MidInitials: B

Mick Watson

FirstName: Mick

LastName: Watson

Stephen Bush

FirstName: Stephen

LastName: Bush

MidInitials: J

Role: data analyst


source GSM674623 1

text: Mus musculus

text: whole brain

characteristic: organism part

text: D2 whole brain RNA

characteristic: sample source name

text: D18-D2 whole brain RNA

characteristic: sample title

text: male

text: DBA/2J (D2)

characteristic: strain


characteristic: SRA accession

text: human pancreatic beta cell

text: Human

characteristic: common name

text: EndoC-BH1 human pancreatic beta cell line - This sample is a human pancreatic beta cell line (EndoC-BH1)

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: EndoC-BH1 is emerging as a critical human beta cell model to study the genetic and environmental etiologies of normal islet function as well as beta cell failure in diabetes. However, comprehensive knowledge of its (epi)genomic landscape has been lacking. Here, we report extensive chromosomal (spectral karyotyping), genetic (genotyping), epigenetic (ChIP-seq, ATAC-seq), chromatin interaction (Hi-C, Pol2 ChIA-PET), and transcriptomic (RNA-seq, miRNA-seq) maps of this cell model. Integrated analyses of these maps define beta cell-specific chromosome territories and transcriptional cis-regulatory programs and identify allelic effects on cis-regulatory element use and expression. Importantly, comparative analyses with maps generated in human islets/beta cells indicate substantial preservation of cis-regulatory element use and chromatin looping. Together, these maps and an interactive web application we have created for their exploration are important tools for the design and completion of experiments to probe and manipulate the genetic programs governing beta cell identity and (dys)function in diabetes.

text: EndoC-BH1 multiomic profiling defines gene regulatory programs intrinsic to human beta cell identity and function

text: pancreas

characteristic: tissue type

The Jackson Laboratory

Address: The Jackson Laboratory for Genomic Medicine, 10 Discovery Drive, Farmington CT, 06032

Nathan Lawlor

FirstName: Nathan

LastName: Lawlor


unit: day

characteristic: animal age at collection

text: colon spiral from a male one week old texel x blackface lamb, OAR_RI_L6

text: neonate

characteristic: developmental stage

text: fed

characteristic: fasted status

text: normal

characteristic: health status at collection

text: specimen from organism

text: Ovis aries

characteristic: organism

text: spiral colon

text: FAANG

unit: YYYY-MM-DD

characteristic: specimen collection date

characteristic: specimen collection protocol

characteristic: submission description

text: Roslin Sheep Atlas


text: live sharksucker

characteristic: date received

text: Echeneidae

characteristic: family

text: individual

characteristic: material

text: Carangiformes

characteristic: order

text: Echeneis naucrates

text: VGP

characteristic: project

text: Byrappa Venkatesh

characteristic: provider

text: Sharksucker

characteristic: provider id

text: The Vertebrate Genomes Project aims to build reference quality genome assemblies for hundreds to thousands of vertebrate species.

characteristic: submission identifier

text: VGP - Vertebrate Genomes Project

characteristic: submission title

text: RNA, flash_frozen

characteristic: tissue storage

Wellcome Trust Sanger Institute

Address: Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SA, UK


characteristic: SRA accession

unit: hour

characteristic: animal age at collection

text: omasum from a female texel x blackface lamb at birth, OAR_RI_L4

characteristic: description

text: neonate

characteristic: developmental stage

text: fasted

text: normal

text: specimen from organism

text: Ovis aries

text: omasum

characteristic: organism part

text: FAANG

text: Roslin Sheep Atlas


text: rumen from a male 8 week old texel x blackface lamb, OAR_RI_L8

text: juvenile days 45-89

text: fed

characteristic: fasted status

text: normal

characteristic: health status at collection

text: specimen from organism

text: Ovis aries

characteristic: organism

text: rumen

text: FAANG

characteristic: specimen collection date

characteristic: specimen collection protocol

text: Roslin Sheep Atlas


unit: year

text: reticulum from an adult male texel x blackface sheep, OAR_RI_AM1

text: adult

text: fed

text: normal

text: specimen from organism

characteristic: material

text: Ovis aries

text: ruminant reticulum

text: FAANG

characteristic: submission description

text: Roslin Sheep Atlas


text: abomasum from a female one week old texel x blackface lamb, OAR_RI_L7

text: neonate

text: fed

text: normal

text: specimen from organism

text: Ovis aries

text: abomasum

text: FAANG

characteristic: project

text: Roslin Sheep Atlas


text: natural population

text: Picea abies

text: Picea abies

characteristic: scientific name

text: Development of a Picea abies SNPs catalog. A bioinformatics pipeline was developed and allowed to detect 61,771 in silico SNPs distributed among 13,543 genes. The true positive rate for this set of SNPs was estimated using a sample of 5571 predicted SNPs by genotyping 1130 P. abies trees using an Illumina Infinium iSelect SNP array. The true positive rate for the set of in silico SNPs was 84.2% and was comparable to the genotyping success rate of 85.4% for a set of 89 P. abies control SNPs successfully genotyped on previous Illumina GoldenGate genotyping arrays. Nucleotide diversity was analyzed across functional categories

text: Picea abies genomic ressources

Jean Bousquet

Address: 1030 av. de la médecine, Office 2162, Quebec (Quebec) G1V 0A6, Université Laval

Aïda Azaiez

FirstName: Aïda

LastName: Azaiez


text: rumen from a male texel x blackface lamb at birth, OAR_RI_L1

text: neonate

text: fasted

text: normal

text: specimen from organism

text: Ovis aries

text: rumen

text: FAANG

characteristic: submission identifier

text: Roslin Sheep Atlas


text: Rice

characteristic: common name

text: rice chloroplast analysis

text: Oryza sativa

text: Oryza sativa

text: This work was carried out with the support of “Cooperative Research Program for Agriculture Science and Technology Development (Project No. PJ01116101)” Rural Development Administration, Republic of Korea. This research was supported by Bio-industry Technology Development Program(115078-2), Ministry of Agriculture, Food and Rural Affairs.

text: Rice evolution analysis based on the chloroplast genome

characteristic: submission title

Plant Resources

Address: Department of Plant Resources, College of Industrial Science, Kongju National University, Yesan 340-702, Republic of Korea

Cheng Lin

FirstName: Cheng

LastName: Lin


characteristic: SRA accession

text: Blood, day 3 after weaning, sequencing lane 1, A13

text: infant

text: fed

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG

text: RNAseq data from blood and muscle samples of calves (Bos taurus)

Iowa State University

Address: Department of Animal Science 1221 Kildee Hall, Iowa State University Ames, Iowa 50011-3150

North Carolina State University

Address: Department of Animal Science, 120 W Broughton Dr, Raleigh, NC 27607

Jeffrey Sommer

FirstName: Jeffrey

LastName: Sommer

MidInitials: J.

Leticia Sanglard

FirstName: Leticia

LastName: Sanglard

Marcio Duarte

FirstName: Marcio

LastName: Duarte

Role: investigator

Matthew Poore

FirstName: Matthew

LastName: Poore

Melissa Ashwell

FirstName: Melissa

LastName: Ashwell

MidInitials: M.

Role: consultant

Moyses Nascimento

FirstName: Moyses

LastName: Nascimento

Role: data coder

Nicola Serao

FirstName: Nicola

LastName: Serao

Philipe Moriel

FirstName: Philipe

LastName: Moriel

MidInitials: P.


characteristic: animal age at collection

text: Skeletal muscle, sequencing lane 2, A11

text: infant

text: fasted

text: normal

text: specimen from organism

text: Bos taurus

text: skeletal muscle tissue

text: FAANG


text: Skeletal muscle, sequencing lane 1, A18

characteristic: description

text: infant

text: fed

text: normal

text: specimen from organism

text: Bos taurus

text: skeletal muscle tissue

text: FAANG


text: Blood, day 3 after weaning, sequencing lane 1, A5

text: infant

characteristic: developmental stage

text: fasted

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Blood, day 0 after weaning, sequencing lane 1, A15

text: infant

text: fed

text: normal

text: specimen from organism

text: Bos taurus

text: blood

characteristic: organism part

text: FAANG


text: Blood, day 3 after weaning, sequencing lane 3, A17

text: infant

text: fed

characteristic: fasted status

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Blood, day 6 after weaning, sequencing lane 3, A3

text: infant

text: fasted

text: normal

characteristic: health status at collection

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Blood, day 0 after weaning, sequencing lane 1, A13

text: infant

text: fed

text: normal

text: specimen from organism

text: Bos taurus

characteristic: organism

text: blood

text: FAANG


text: Blood, day 15 after weaning, sequencing lane 3, A17

text: infant

text: fed

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG

characteristic: specimen collection date


text: Blood, day 15 after weaning, sequencing lane 1, A15

text: infant

text: fed

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG

characteristic: specimen collection protocol


text: Blood, day 3 after weaning, sequencing lane 2, A1

text: infant

text: fasted

text: normal

text: specimen from organism

characteristic: material

text: Bos taurus

text: blood

text: FAANG


text: Blood, day 0 after weaning, sequencing lane 3, A3

text: infant

text: fasted

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG

characteristic: submission description


text: Skeletal muscle, sequencing lane 2, A9

text: infant

text: fasted

text: normal

text: specimen from organism

text: Bos taurus

text: skeletal muscle tissue

text: FAANG

characteristic: project


text: Skeletal muscle, sequencing lane 1, A2

text: infant

text: fasted

text: normal

text: specimen from organism

text: Bos taurus

text: skeletal muscle tissue

text: FAANG


text: Blood, day 0 after weaning, sequencing lane 1, A5

text: infant

text: fasted

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Blood, day 0 after weaning, sequencing sequencing lane 2, A1

text: infant

text: fasted

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Skeletal muscle, sequencing lane 2, A19

text: infant

text: fed

text: normal

text: specimen from organism

text: Bos taurus

text: skeletal muscle tissue

text: FAANG


text: Skeletal muscle, sequencing lane 2, A10

text: infant

text: fasted

text: normal

text: specimen from organism

text: Bos taurus

text: skeletal muscle tissue

text: FAANG


text: Skeletal muscle, sequencing lane 1, A3

text: infant

text: fasted

text: normal

text: specimen from organism

text: Bos taurus

text: skeletal muscle tissue

text: FAANG


text: Blood, day 15 after weaning, sequencing lane 1, A13

text: infant

text: fed

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Blood, day 0 after weaning, sequencing lane 3, A17

text: infant

text: fed

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Blood, day 3 after weaning, sequencing lane 3, A3

text: infant

text: fasted

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Blood, day 3 after weaning, sequencing lane 3, A4

text: infant

text: fasted

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Blood, day 6 after weaning, sequencing lane 1, A13

text: infant

text: fed

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Blood, day 15 after weaning, sequencing lane 2, A1

text: infant

text: fasted

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG

text: RNAseq data from blood and muscle samples of calves (Bos taurus)


text: Blood, day 6 after weaning, sequencing lane 1, A15

text: infant

text: fed

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Skeletal muscle, sequencing lane 1, A17

text: infant

text: fed

text: normal

text: specimen from organism

text: Bos taurus

text: skeletal muscle tissue

text: FAANG


text: Skeletal muscle, sequencing lane 1, A6

text: infant

text: fasted

text: normal

text: specimen from organism

text: Bos taurus

text: skeletal muscle tissue

text: FAANG


text: Blood, day 6 after weaning, sequencing lane 3, A16

text: infant

text: fed

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Blood, day 6 after weaning, sequencing lane 3, A17

text: infant

text: fed

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Blood, day 15 after weaning, sequencing lane 2, A14

text: infant

text: fed

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Blood, day 0 after weaning, sequencing lane 3, A16

text: infant

text: fed

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Skeletal muscle, sequencing lane 1, A12

text: infant

text: fasted

text: normal

text: specimen from organism

text: Bos taurus

text: skeletal muscle tissue

text: FAANG


text: Blood, day 15 after weaning, sequencing lane 2, A6

text: infant

text: fasted

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Skeletal muscle, sequencing lane 2, A5

text: infant

text: fasted

text: normal

text: specimen from organism

text: Bos taurus

text: skeletal muscle tissue

text: FAANG


text: Skeletal muscle, sequencing lane 1, A20

text: infant

text: fed

text: normal

text: specimen from organism

text: Bos taurus

text: skeletal muscle tissue

text: FAANG


text: Blood, day 0 after weaning, sequencing lane 2, A6

text: infant

text: fasted

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Blood, day 3 after weaning, sequencing lane 1, A2

text: infant

text: fasted

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Blood, day 15 after weaning, sequencing lane 3, A3

text: infant

text: fasted

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Blood, day 0 after weaning, sequencing lane 2, A14

text: infant

text: fed

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Skeletal muscle, sequencing lane 2, A21

text: infant

text: fed

text: normal

text: specimen from organism

text: Bos taurus

text: skeletal muscle tissue

text: FAANG


text: Blood, day 6 after weaning, sequencing lane 2, A1

text: infant

text: fasted

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Skeletal muscle, sequencing lane 1, A16

text: infant

text: fed

text: normal

text: specimen from organism

text: Bos taurus

text: skeletal muscle tissue

text: FAANG


text: Blood, day 6 after weaning, sequencing lane 2, A14

text: infant

text: fed

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Skeletal muscle, sequencing lane 1, A8

text: infant

text: fasted

text: normal

text: specimen from organism

text: Bos taurus

text: skeletal muscle tissue

text: FAANG


text: Blood, day 6 after weaning, sequencing lane 1, A5

text: infant

text: fasted

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Skeletal muscle, sequencing lane 2 , A1

text: infant

text: fasted

text: normal

text: specimen from organism

text: Bos taurus

text: skeletal muscle tissue

text: FAANG


text: Skeletal muscle, sequencing lane 1, A22

text: infant

text: fed

text: normal

text: specimen from organism

text: Bos taurus

text: skeletal muscle tissue

text: FAANG


text: Blood, day 3 after weaning, sequencing lane 1, A15

text: infant

text: fed

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Blood, day 0 after weaning, sequencing lane 1, A2

text: infant

text: fasted

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Skeletal muscle, sequencing lane 1, A13

text: infant

text: fed

text: normal

text: specimen from organism

text: Bos taurus

text: skeletal muscle tissue

text: FAANG


text: Skeletal muscle, sequencing lane 2, A15

text: infant

text: fed

text: normal

text: specimen from organism

text: Bos taurus

text: skeletal muscle tissue

text: FAANG


text: Blood, day 6 after weaning, sequencing lane 1, A2

text: infant

text: fasted

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Skeletal muscle, sequencing lane 2, A4

text: infant

text: fasted

text: normal

text: specimen from organism

text: Bos taurus

text: skeletal muscle tissue

text: FAANG

text: RNAseq data from blood and muscle samples of calves (Bos taurus)


text: Blood, day 3 after weaning, sequencing lane 2, A6

text: infant

text: fasted

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Blood, day 15 after weaning, sequencing lane 3, A4

text: infant

text: fasted

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Blood, day 0 after weaning, sequencing lane 2, A24

text: infant

text: fed

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Skeletal muscle, sequencing lane 2, A23

text: infant

text: fed

text: normal

text: specimen from organism

text: Bos taurus

text: skeletal muscle tissue

text: FAANG


text: Blood, day 3 after weaning, sequencing lane 2, A24

text: infant

text: fed

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Blood, day 15 after weaning, sequencing lane 1, A5

text: infant

text: fasted

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Blood, day 6 after weaning, sequencing lane 2, A6

text: infant

text: fasted

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Blood, day 0 after weaning, sequencing lane 3, A4

text: infant

text: fasted

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Blood, day 15 after weaning, sequencing lane 3, A16

text: infant

text: fed

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Blood, day 15 after weaning, sequencing lane 1, A2

text: infant

text: fasted

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Blood, day 6 after weaning, sequencing lane 2, A24

text: infant

text: fed

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Blood, day 6 after weaning, sequencing lane 3, A4

text: infant

text: fasted

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Skeletal muscle, sequencing lane 1, A14

text: infant

text: fed

text: normal

text: specimen from organism

text: Bos taurus

text: skeletal muscle tissue

text: FAANG


text: Skeletal muscle, sequencing lane 1, A7

text: infant

text: fasted

text: normal

text: specimen from organism

text: Bos taurus

text: skeletal muscle tissue

text: FAANG


text: Blood, day 3 after weaning, sequencing lane 2, A14

text: infant

text: fed

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: Blood, day 15 after weaning, sequencing lane 2, A24

text: infant

text: fed

text: normal

text: specimen from organism

text: Bos taurus

text: blood

text: FAANG


text: reticulum from an adult male texel x blackface sheep, OAR_RI_AM3

text: adult

text: fed

text: normal

text: specimen from organism

text: Ovis aries

text: ruminant reticulum

text: FAANG

text: The Roslin Institute Sheep Gene Expression Atlas Project

text: Roslin Sheep Atlas

Alan Archibald

FirstName: Alan

LastName: Archibald

Bruce Whitelaw

FirstName: Bruce

LastName: Whitelaw

David Hume

FirstName: David

LastName: Hume


text: rumen from a male one week old texel x blackface lamb, OAR_RI_L6

text: neonate

text: fed

text: normal

text: specimen from organism

text: Ovis aries

text: rumen

text: FAANG

text: Roslin Sheep Atlas

Emily Clark

FirstName: Emily

LastName: Clark

Kim Summers

FirstName: Kim

LastName: Summers

Mary McCulloch

FirstName: Mary

LastName: McCulloch


text: spleen from an adult female texel x blackface sheep, OAR_RI_AF3

text: adult

text: fed

text: normal

text: specimen from organism

text: Ovis aries

text: spleen

text: FAANG

text: Roslin Sheep Atlas

Mick Watson

FirstName: Mick

LastName: Watson

Stephen Bush

FirstName: Stephen

LastName: Bush


text: Slime mold

text: dictyBase Stock Center

characteristic: culture collection

text: Dictyostelium discoideum NC76.1

text: vegetative

characteristic: dev stage

text: USA

characteristic: geographic location (country and/or sea)

text: North Carolina

characteristic: geographic location (region and locality)

characteristic: lat lon

text: Dictyostelium discoideum

text: Dictyostelium discoideum

characteristic: scientific name

text: Whole genome sequencing of natural strains of D. discoideum from the USA and the world used to uncover the general impact of social conflict on the genome of this species.

text: Whole genome sequencing of natural populations of social amoebae Dictyostelium discoideum

Wolf Lab for Evolutionary Genetics

Address: University of Bath, Claverton Down, Bath, BA2 7AY, United Kingdom

Atahualpa Castillo-Morales

FirstName: Atahualpa

LastName: Castillo-Morales


characteristic: SRA accession

text: Slime mold

characteristic: common name

text: dictyBase Stock Center

text: Dictyostelium discoideum NC94.1

characteristic: description

text: vegetative

text: USA

text: North Carolina

text: Dictyostelium discoideum

text: Dictyostelium discoideum

characteristic: submission identifier

characteristic: submission title


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum NC66.2

text: vegetative

text: USA

text: North Carolina

text: Dictyostelium discoideum

characteristic: organism

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum DCB10B1

text: vegetative

text: USA

text: North Carolina

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum C5A

text: vegetative

text: USA

text: Virginia

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum WS655

text: vegetative

text: USA

text: Wisconsin

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum NC63.2

text: vegetative

text: USA

text: North Carolina

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum DD185

text: vegetative

text: USA

text: Delaware

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum FW1H1B

text: vegetative

text: USA

text: West Virgina

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum NC73.1

text: vegetative

text: USA

text: North Carolina

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum QS112

text: vegetative

text: USA

text: Illinois

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum WS583

text: vegetative

text: USA

text: Wisconsin

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum NC28.1

text: vegetative

text: USA

text: North Carolina

text: Dictyostelium discoideum

text: Dictyostelium discoideum


MFD

text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum MFD

text: vegetative

text: USA

text: Delaware

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum NC98.1

text: vegetative

text: USA

text: North Carolina

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum QS111

text: vegetative

text: USA

text: Indiana

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum DD11

text: vegetative

text: Germany

text: Germany

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum NC34.1

text: vegetative

text: USA

text: North Carolina

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum B10

text: vegetative

text: USA

text: Virginia

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum NC67.2

text: vegetative

text: USA

text: North Carolina

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum NC47.2

text: vegetative

text: USA

text: North Carolina

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum NC59.2

text: vegetative

text: USA

text: North Carolina

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum NC58.1

text: vegetative

text: USA

text: North Carolina

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum NC60.2

text: vegetative

text: USA

text: North Carolina

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum NC88.2

text: vegetative

text: USA

text: North Carolina

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum DD61

text: vegetative

text: USA

text: Kansas

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum NC80.1

text: vegetative

text: USA

text: North Carolina

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum NC99.1

text: vegetative

text: USA

text: North Carolina

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum NC75.2

text: vegetative

text: USA

text: North Carolina

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum NC77.1

text: vegetative

text: USA

text: North Carolina

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum WS10

text: vegetative

text: USA

text: Wisconsin

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum NC78.2

text: vegetative

text: USA

text: North Carolina

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum S212

text: vegetative

text: USA

text: Texas

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum K10

text: vegetative

text: USA

text: Ohio

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum NC61.1

text: vegetative

text: USA

text: North Carolina

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum QS102

text: vegetative

text: Costa Rica

text: Puntarenas

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum NC71.1

text: vegetative

text: USA

text: North Carolina

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum SB42A

text: vegetative

text: USA

text: Virginia

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum WS582

text: vegetative

text: USA

text: Wisconsin

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum DD10

text: vegetative

text: Germany

text: Germany

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum NC69.1

text: vegetative

text: USA

text: North Carolina

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum NC39.1

text: vegetative

text: USA

text: North Carolina

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum NC85.2

text: vegetative

text: USA

text: North Carolina

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum V12

text: vegetative

text: USA

text: Virginia

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum NC87.1

text: vegetative

text: USA

text: North Carolina

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum WS380B

text: vegetative

text: USA

text: Wisconsin

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum S63

text: vegetative

text: USA

text: Kentucky

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum WS269

text: vegetative

text: USA

text: Wisconsin

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum NC52.3

text: vegetative

text: USA

text: North Carolina

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum WS51

text: vegetative

text: USA

text: Wisconsin

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum S220

text: vegetative

text: USA

text: Missouri

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum WS656

text: vegetative

text: USA

text: Wisconsin

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum QS31

text: vegetative

text: USA

text: Texas

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum WS576

text: vegetative

text: USA

text: Wisconsin

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum NC54.2

text: vegetative

text: USA

text: North Carolina

text: Dictyostelium discoideum

text: Dictyostelium discoideum


ML

text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum ML

text: vegetative

text: USA

text: Virginia

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum NC43.1

text: vegetative

text: USA

text: North Carolina

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum NC34.2

text: vegetative

text: USA

text: North Carolina

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum S109

text: vegetative

text: USA

text: Arkansas

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum S210

text: vegetative

text: USA

text: Missouri

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum NC70.1

text: vegetative

text: USA

text: North Carolina

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum NC105.1

text: vegetative

text: USA

text: North Carolina

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum NC96.1

text: vegetative

text: USA

text: North Carolina

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum CT10B

text: vegetative

text: USA

text: Texas

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum NC60.1

text: vegetative

text: USA

text: North Carolina

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum S224

text: vegetative

text: USA

text: Illinois

text: Dictyostelium discoideum

text: Dictyostelium discoideum


text: Slime mold

text: dictyBase Stock Center

text: Dictyostelium discoideum GC1A

text: vegetative

text: USA

text: Tennessee

text: Dictyostelium discoideum

text: Dictyostelium discoideum


characteristic: animal age at collection

text: rumen from an adult female texel x blackface sheep, OAR_RI_AF2

text: adult

characteristic: developmental stage

text: fed

characteristic: fasted status

text: normal

characteristic: health status at collection

text: specimen from organism

text: Ovis aries

text: rumen

characteristic: organism part

text: FAANG

characteristic: specimen collection date

text: Roslin Sheep Atlas


text: lung from an adult female texel x blackface sheep, OAR_RI_AF2

text: adult

text: fed

text: normal

text: specimen from organism

characteristic: material

text: Ovis aries

text: lung

text: FAANG

characteristic: project

characteristic: specimen collection protocol

characteristic: submission description

text: Roslin Sheep Atlas


text: Hot Pepper

text: Hot pepper unique line 18 - F2 plants derived from a cross between Novator and PBC315

text: Capsicum annuum L.

text: Capsicum annuum L.

characteristic: scientific name

text: This project is for developing GMS associated markers of hot and sweet pepper

text: Identification of single nucleotide polymorphic markers linked to two non-allelic genetic male sterile genes in peppers through genotyping by sequencing

Biotechnology&Molecular Breeding

Address: 60 Yi-Min Liao, Shanhua, Tainan 74151 Taiwan

Roland Schafleitner

FirstName: Roland

LastName: Schafleitner


characteristic: SRA accession

text: Sweet Pepper

text: Sweet pepper unique line 15 - a NIL population derived through continuous selfing and simple selection of a GMS-based sweet pepper hybrid ‘Forever’ developed by Syngenta

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Sweet Pepper

characteristic: common name

text: Sweet pepper unique line 41 - a NIL population derived through continuous selfing and simple selection of a GMS-based sweet pepper hybrid ‘Forever’ developed by Syngenta

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Sweet Pepper

text: Sweet pepper unique line 30 - a NIL population derived through continuous selfing and simple selection of a GMS-based sweet pepper hybrid ‘Forever’ developed by Syngenta

characteristic: description

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Hot Pepper

text: Hot pepper unique line 45 - F2 plants derived from a cross between Novator and PBC315

text: Capsicum annuum L.

text: Capsicum annuum L.

characteristic: submission identifier


text: Sweet Pepper

text: Sweet pepper unique line 7 - a NIL population derived through continuous selfing and simple selection of a GMS-based sweet pepper hybrid ‘Forever’ developed by Syngenta

text: Capsicum annuum L.

text: Capsicum annuum L.

characteristic: submission title


text: Hot Pepper

text: Hot pepper unique line 25 - F2 plants derived from a cross between Novator and PBC315

text: Capsicum annuum L.

characteristic: organism

text: Capsicum annuum L.


text: Sweet Pepper

text: Sweet pepper unique line 44 - a NIL population derived through continuous selfing and simple selection of a GMS-based sweet pepper hybrid ‘Forever’ developed by Syngenta

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Hot Pepper

text: Hot pepper unique line 36 - F2 plants derived from a cross between Novator and PBC315

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Sweet Pepper

text: Sweet pepper unique line 19 - a NIL population derived through continuous selfing and simple selection of a GMS-based sweet pepper hybrid ‘Forever’ developed by Syngenta

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Sweet Pepper

text: Sweet pepper unique line 24 - a NIL population derived through continuous selfing and simple selection of a GMS-based sweet pepper hybrid ‘Forever’ developed by Syngenta

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Sweet Pepper

text: Sweet pepper unique line 12 - a NIL population derived through continuous selfing and simple selection of a GMS-based sweet pepper hybrid ‘Forever’ developed by Syngenta

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Hot Pepper

text: Hot pepper unique line 11 - F2 plants derived from a cross between Novator and PBC315

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Sweet Pepper

text: Sweet pepper unique line 36 - a NIL population derived through continuous selfing and simple selection of a GMS-based sweet pepper hybrid ‘Forever’ developed by Syngenta

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Hot Pepper

text: Hot pepper unique line 22 - F2 plants derived from a cross between Novator and PBC315

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Hot Pepper

text: Hot pepper unique line 31 - F2 plants derived from a cross between Novator and PBC315

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Sweet Pepper

text: Sweet pepper unique line 40 - a NIL population derived through continuous selfing and simple selection of a GMS-based sweet pepper hybrid ‘Forever’ developed by Syngenta

text: Capsicum annuum L.

text: Capsicum annuum L.

text: This project is for developing GMS associated markers of hot and sweet pepper


text: Sweet Pepper

text: Sweet pepper unique line 10 - a NIL population derived through continuous selfing and simple selection of a GMS-based sweet pepper hybrid ‘Forever’ developed by Syngenta

text: Capsicum annuum L.

text: Capsicum annuum L.

text: Identification of single nucleotide polymorphic markers linked to two non-allelic genetic male sterile genes in peppers through genotyping by sequencing


text: Sweet Pepper

text: Sweet pepper unique line 39 - a NIL population derived through continuous selfing and simple selection of a GMS-based sweet pepper hybrid ‘Forever’ developed by Syngenta

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Hot Pepper

text: Hot pepper unique line 8 - F2 plants derived from a cross between Novator and PBC315

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Hot Pepper

text: Hot pepper unique line 39 - F2 plants derived from a cross between Novator and PBC315

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Hot Pepper

text: Hot pepper unique line 33 - F2 plants derived from a cross between Novator and PBC315

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Hot Pepper

text: Hot pepper unique line 3 - F2 plants derived from a cross between Novator and PBC315

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Sweet Pepper

text: Sweet pepper unique line 34 - a NIL population derived through continuous selfing and simple selection of a GMS-based sweet pepper hybrid ‘Forever’ developed by Syngenta

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Sweet Pepper

text: Sweet pepper unique line 18 - a NIL population derived through continuous selfing and simple selection of a GMS-based sweet pepper hybrid ‘Forever’ developed by Syngenta

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Sweet Pepper

text: Sweet pepper unique line 46 - a NIL population derived through continuous selfing and simple selection of a GMS-based sweet pepper hybrid ‘Forever’ developed by Syngenta

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Hot Pepper

text: Hot pepper unique line 27 - F2 plants derived from a cross between Novator and PBC315

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Sweet Pepper

text: Sweet pepper unique line 29 - a NIL population derived through continuous selfing and simple selection of a GMS-based sweet pepper hybrid ‘Forever’ developed by Syngenta

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Sweet Pepper

text: Sweet pepper unique line 11 - a NIL population derived through continuous selfing and simple selection of a GMS-based sweet pepper hybrid ‘Forever’ developed by Syngenta

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Sweet Pepper

text: Sweet pepper unique line 21 - a NIL population derived through continuous selfing and simple selection of a GMS-based sweet pepper hybrid ‘Forever’ developed by Syngenta

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Hot Pepper

text: Hot pepper unique line 37 - F2 plants derived from a cross between Novator and PBC315

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Sweet Pepper

text: Sweet pepper unique line 26 - a NIL population derived through continuous selfing and simple selection of a GMS-based sweet pepper hybrid ‘Forever’ developed by Syngenta

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Sweet Pepper

text: Sweet pepper unique line 23 - a NIL population derived through continuous selfing and simple selection of a GMS-based sweet pepper hybrid ‘Forever’ developed by Syngenta

text: Capsicum annuum L.

text: Capsicum annuum L.

text: This project is for developing GMS associated markers of hot and sweet pepper


text: Sweet Pepper

text: Sweet pepper unique line 35 - a NIL population derived through continuous selfing and simple selection of a GMS-based sweet pepper hybrid ‘Forever’ developed by Syngenta

text: Capsicum annuum L.

text: Capsicum annuum L.

text: Identification of single nucleotide polymorphic markers linked to two non-allelic genetic male sterile genes in peppers through genotyping by sequencing


text: Hot Pepper

text: Hot pepper unique line 17 - F2 plants derived from a cross between Novator and PBC315

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Hot Pepper

text: Hot pepper unique line 9 - F2 plants derived from a cross between Novator and PBC315

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Sweet Pepper

text: Sweet pepper unique line 38 - a NIL population derived through continuous selfing and simple selection of a GMS-based sweet pepper hybrid ‘Forever’ developed by Syngenta

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Sweet Pepper

text: Sweet pepper unique line 3 - a NIL population derived through continuous selfing and simple selection of a GMS-based sweet pepper hybrid ‘Forever’ developed by Syngenta

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Hot Pepper

text: Hot pepper unique line 34 - F2 plants derived from a cross between Novator and PBC315

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Hot Pepper

text: Hot pepper unique line 1 - F2 plants derived from a cross between Novator and PBC315

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Sweet Pepper

text: Sweet pepper unique line 9 - a NIL population derived through continuous selfing and simple selection of a GMS-based sweet pepper hybrid ‘Forever’ developed by Syngenta

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Hot Pepper

text: Hot pepper unique line 38 - F2 plants derived from a cross between Novator and PBC315

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Sweet Pepper

text: Sweet pepper unique line 5 - a NIL population derived through continuous selfing and simple selection of a GMS-based sweet pepper hybrid ‘Forever’ developed by Syngenta

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Hot Pepper

text: Hot pepper unique line 44 - F2 plants derived from a cross between Novator and PBC315

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Sweet Pepper

text: Sweet pepper unique line 33 - a NIL population derived through continuous selfing and simple selection of a GMS-based sweet pepper hybrid ‘Forever’ developed by Syngenta

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Hot Pepper

text: Hot pepper unique line 4 - F2 plants derived from a cross between Novator and PBC315

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Hot Pepper

text: Hot pepper unique line 16 - F2 plants derived from a cross between Novator and PBC315

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Sweet Pepper

text: Sweet pepper unique line 22 - a NIL population derived through continuous selfing and simple selection of a GMS-based sweet pepper hybrid ‘Forever’ developed by Syngenta

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Hot Pepper

text: Hot pepper unique line 41 - F2 plants derived from a cross between Novator and PBC315

text: Capsicum annuum L.

text: Capsicum annuum L.

text: This project is for developing GMS associated markers of hot and sweet pepper


text: Hot Pepper

text: Hot pepper unique line 46 - F2 plants derived from a cross between Novator and PBC315

text: Capsicum annuum L.

text: Capsicum annuum L.

text: Identification of single nucleotide polymorphic markers linked to two non-allelic genetic male sterile genes in peppers through genotyping by sequencing


text: Hot Pepper

text: Hot pepper unique line 14 - F2 plants derived from a cross between Novator and PBC315

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Hot Pepper

text: Hot pepper unique line 26 - F2 plants derived from a cross between Novator and PBC315

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Sweet Pepper

text: Sweet pepper unique line 20 - a NIL population derived through continuous selfing and simple selection of a GMS-based sweet pepper hybrid ‘Forever’ developed by Syngenta

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Sweet Pepper

text: Sweet pepper unique line 14 - a NIL population derived through continuous selfing and simple selection of a GMS-based sweet pepper hybrid ‘Forever’ developed by Syngenta

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Sweet Pepper

text: Sweet pepper unique line 45 - a NIL population derived through continuous selfing and simple selection of a GMS-based sweet pepper hybrid ‘Forever’ developed by Syngenta

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Hot Pepper

text: Hot pepper unique line 40 - F2 plants derived from a cross between Novator and PBC315

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Hot Pepper

text: Hot pepper unique line 24 - F2 plants derived from a cross between Novator and PBC315

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Hot Pepper

text: Hot pepper unique line 12 - F2 plants derived from a cross between Novator and PBC315

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Hot Pepper

text: Hot pepper unique line 35 - F2 plants derived from a cross between Novator and PBC315

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Hot Pepper

text: Hot pepper unique line 10 - F2 plants derived from a cross between Novator and PBC315

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Sweet Pepper

text: Sweet pepper unique line 28 - a NIL population derived through continuous selfing and simple selection of a GMS-based sweet pepper hybrid ‘Forever’ developed by Syngenta

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Sweet Pepper

text: Sweet pepper unique line 1 - a NIL population derived through continuous selfing and simple selection of a GMS-based sweet pepper hybrid ‘Forever’ developed by Syngenta

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Hot Pepper

text: Hot pepper unique line 21 - F2 plants derived from a cross between Novator and PBC315

text: Capsicum annuum L.

text: Capsicum annuum L.


text: Hot Pepper

text: Hot pepper unique line 42 - F2 plants derived from a cross between Novator and PBC315

text: Capsicum annuum L.

text: Capsicum annuum L.


text: H

characteristic: Unique Name Prefix

text: H.333 - HAES 333, Germplasm origin, HMNC Nutridge orchard, Hawaii

text: Macadamia integrifolia

text: Macadamia integrifolia

text: Variation data from reference assembly of whole genome sequence data to Macadamia integrifolia chloroplast genome

text: Wild origins of macadamia domestication identified through intraspecific chloroplast genome sequencing

Southern Cross Plant Science

Address: Military Road, Lismore NSW 2480 Australia

Catherine Nock

FirstName: Catherine

LastName: Nock


text: W

text: W26.MC6 - Germplasm origin, Mt Cotton, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia


text: W

text: W31.Co1 - Germplasm origin, Upper Coomera, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia


text: W

text: W30.WV - Germplasm origin, Wild Site 30, Willowvale, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia


text: W

text: W11.AM6 - Germplasm origin, Amamoor, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia


text: H

text: H.741 - HAES 741, Germplasm origin, Deschwanden orchard, Hawaii

text: Macadamia integrifolia

text: Macadamia integrifolia


text: H

text: H.Purv - Germplasm origin, Kapulena, Hawaii

text: Macadamia integrifolia

text: Macadamia integrifolia


text: C

text: C.HEI - Germplasm origin, Coronado, California

text: Macadamia integrifolia

text: Macadamia integrifolia


text: H

text: H.TPS - Germplasm origin, Kapulena, Hawaii

text: Macadamia integrifolia

text: Macadamia integrifolia


text: W

text: W23.HP4 - Germplasm origin, Holland Park, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia


text: W

text: W01.MB1 - Germplasm origin, Mt Bauple, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia


text: H

text: H.425 - HAES 425, Germplasm origin, HMNC Keauhou orchard, Hawaii

text: Macadamia integrifolia

text: Macadamia integrifolia


text: W

text: W25.MC1 - Germplasm origin, Mt Cotton, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia


text: W

text: W20.Sa6 - Germplasm origin, Samford, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia


text: W

text: W12.AM3 - Germplasm origin, Amamoor, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia


text: W

text: W19.Sa1 - Germplasm origin, Samford, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia


text: H

text: H.Cwy - Germplasm origin, Coelho Way, Honolulu, Hawaii

text: Macadamia integrifolia

text: Macadamia integrifolia

text: Variation data from reference assembly of whole genome sequence data to Macadamia integrifolia chloroplast genome


text: H

text: H.Nut12 - Germplasm origin, HMNC Nutridge orchard, Hawaii

text: Macadamia integrifolia

text: Macadamia integrifolia

text: Wild origins of macadamia domestication identified through intraspecific chloroplast genome sequencing


text: W

text: W15.Vi5 - Germplasm origin, Villeneuve, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia


text: W

text: W06.MCk3 - Germplasm origin, Marys Creek, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia


text: W

text: W22.MN7 - Germplasm origin, Mt Nebo, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia


text: H

text: H.Nut14 - Germplasm origin, HMNC Nutridge orchard, Hawaii

text: Macadamia integrifolia

text: Macadamia integrifolia


text: W

text: W07.MR1 - Germplasm origin, Mary River, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia


text: W

text: W04.MB4 - Germplasm origin, Mt Bauple, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia


text: W

text: W28.OR1 - Germplasm origin, Ormeau, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia


text: W

text: W21.SA2 - Germplasm origin, Samford, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia


text: W

text: W08.Mo3 - Germplasm origin, Mooloo, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia


text: W

text: W17.UC4 - Germplasm origin, Upper Caboolture, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia


text: W

text: W20.Sa2 - Germplasm origin, Samford, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia


text: H

text: H.Nut03 - Germplasm origin, HMNC Nutridge orchard, Hawaii

text: Macadamia integrifolia

text: Macadamia integrifolia


text: W

text: W23.HP1 - Germplasm origin, Holland Park, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia


text: H

text: H.660 - HAES 660, Germplasm origin, Deschwanden orchard, Hawaii

text: Macadamia integrifolia

text: Macadamia integrifolia


text: W

text: W05.MB5 - Germplasm origin, Mt Bauple, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia

text: Variation data from reference assembly of whole genome sequence data to Macadamia integrifolia chloroplast genome


text: W

text: W10.Am2 - Germplasm origin, Amamoor, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia

text: Wild origins of macadamia domestication identified through intraspecific chloroplast genome sequencing


text: W

text: W24.TIN2 - Germplasm origin, Tingalpa, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia


text: H

text: H.246 - HAES 246, Germplasm origin, HMNC Nutridge orchard, Hawaii

text: Macadamia integrifolia

text: Macadamia integrifolia


text: H

text: H.344 - HAES 344, Germplasm origin, HMNC Nutridge orchard, Hawaii

text: Macadamia integrifolia

text: Macadamia integrifolia


text: H

text: H.294 - HAES 294, Germplasm origin, HMNC Nutridge orchard, Hawaii

text: Macadamia integrifolia

text: Macadamia integrifolia


text: H

text: H.508 - HAES 508, Germplasm origin, HMNC Nutridge orchard, Hawaii

text: Macadamia integrifolia

text: Macadamia integrifolia


text: W

text: W29.Or5 - Germplasm origin, Ormeau, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia


text: H

text: H.Nut07 - Germplasm origin, HMNC Nutridge orchard, Hawaii

text: Macadamia integrifolia

text: Macadamia integrifolia


text: A

text: A.WH - Germplasm origin, Brisbane Botanical Gardens, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia


text: H

text: H.Wia - Germplasm origin, Waipio Valley, Hawaii

text: Macadamia integrifolia

text: Macadamia integrifolia


text: W

text: W06.MCk6 - Germplasm origin, Marys Creek, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia


text: W

text: W04.MB3 - Germplasm origin, Mt Bauple, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia


text: C

text: C.FAU - Germplasm origin, Faulkner Farm, California

text: Macadamia integrifolia

text: Macadamia integrifolia


text: H

text: H.791 - HAES 791, Germplasm origin, HMNC Nutridge orchard, Hawaii

text: Macadamia integrifolia

text: Macadamia integrifolia


text: H

text: H.HSp - Honokaa Special, Germplasm origin, HSC Kapulena orchard, Hawaii

text: Macadamia integrifolia

text: Macadamia integrifolia


text: W

text: W28.Or4 - Germplasm origin, Ormeau, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia

text: Variation data from reference assembly of whole genome sequence data to Macadamia integrifolia chloroplast genome


text: H

text: H.814 - HAES 814, Germplasm origin, Malamka-Ki UH Experiment Station, Hawaii

text: Macadamia integrifolia

text: Macadamia integrifolia

text: Wild origins of macadamia domestication identified through intraspecific chloroplast genome sequencing


text: W

text: W27.Bee1 - Germplasm origin, Beenleigh, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia


text: H

text: H.TPN - Germplasm origin, Kapulena, Hawaii

text: Macadamia integrifolia

text: Macadamia integrifolia


text: W

text: W02.MB5 - Germplasm origin, Mt Bauple, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia


text: W

text: W16.CP1 - Germplasm origin, Campbells Pocket, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia


text: W

text: W02.MB3 - Germplasm origin, Mt Bauple, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia


text: W

text: W03.MB1 - Germplasm origin, Mt Bauple, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia


text: A

text: A.Yer - Germplasm origin, Yeronga, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia


text: C

text: C.UCB - Germplasm origin, UC Berkeley, California

text: Macadamia integrifolia

text: Macadamia integrifolia


text: W

text: W04.MB1 - Germplasm origin, Mt Bauple, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia


text: W

text: W15.Vi4 - Germplasm origin, Villeneuve, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia


text: W

text: W17.UC6 - Germplasm origin, Upper Caboolture, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia


text: W

text: W08.Mo4 - Germplasm origin, Mooloo, Queensland

text: Macadamia integrifolia

text: Macadamia integrifolia


characteristic: animal age at collection

text: brain from a day 35 texel x blackface sheep embryo, OAR_RI_ETB5

text: embryo stage

characteristic: developmental stage

text: fed

text: normal

text: specimen from organism

text: Ovis aries

text: brain

text: FAANG

text: The Roslin Institute Sheep Gene Expression Atlas Project

text: Roslin Sheep Atlas


text: skeletal muscle bicep from an adult female texel x blackface sheep, OAR_RI_AF2

text: adult

text: fed

characteristic: fasted status

text: normal

characteristic: health status at collection

text: specimen from organism

text: Ovis aries

text: skeletal muscle tissue of biceps brachii

text: FAANG

text: Roslin Sheep Atlas


text: Blood

characteristic: cell type

text: Mouse

text: Vehicle treated offspring blood 1 - Blood was collected from the offspring in Vehicle treated group of pair 1.

text: Mus musculus

text: Mus musculus

text: Female

characteristic: sex

text: In our study, scWES was employed on oocytes from female mice with different reproductive ages. We also performed whole exome sequencing on bluk blood samples in trios to detect de novo germline variations in oocytes. Both natural aging and accelerated reproductive aging were involved. We demonstrated that genetic alterations, including base variants and structural variations, occurred in mouse oocytes during aging. Genes harboring natural aging or accelerated aging-related de novo germline variants (DNGVs) were almost involved in Ugt1a, V2R, and Mucin gene families. A copy number variant (CNV) associated with chromatin modeling were detected in natural aging oocytes. More importantly, we shortlisted various critical biological functions, like calcium binding pathway and p53 pathways, affected by these aging-related genetic alterations. Our work is the first study to identify genetic alterations in mouse oocytes with in vivo aging and offers a new direction of dissecting the aging mechanisms in oocytes and clarifying genetic causes of lower fertility at advanced maternal age.

text: Revealing de novo Age-related Genetic Alterations in Mouse Oocytes through Single-cell Exome Sequencing

Address: Room623, Area 39, CUHK, Shatin, N.T. , Hong Kong

Yan QIAN

FirstName: Yan

LastName: QIAN


text: Blood

text: Mouse

text: Young female blood 1 - Blood was collected from the female in young group of pair 1.

text: Mus musculus

text: Mus musculus

text: Female


text: Oocyte

text: Mouse

text: VCD treated oocyte 2 - The oocyte was collected from the female in VCD treated group of pair 2.

text: Mus musculus

text: Mus musculus

text: Female


text: Oocyte

text: Mouse

text: VCD treated oocyte 1 - The oocyte was collected from the female in VCD treated group of pair 1.

text: Mus musculus

text: Mus musculus

text: Female


text: Blood

text: Mouse

text: Vehicle treated offspring blood 2 - Blood was collected from the offspring in Vehicle treated group of pair 2.

text: Mus musculus

text: Mus musculus

text: Female


text: Blood

text: Mouse

text: Natural aging female blood 1 - Blood was collected from the female in natural aging group of pair 1.

text: Mus musculus

text: Mus musculus

text: Female


text: Blood

text: Mouse

text: Natural aging female blood 2 - Blood was collected from the female in natural aging group of pair 2.

text: Mus musculus

text: Mus musculus

text: Female


text: Blood

text: Mouse

text: VCD treated offspring blood 2 - Blood was collected from the female in VCD treated group of pair 2.

text: Mus musculus

text: Mus musculus

text: Female


text: Blood

text: Mouse

text: VCD treated offspring blood 1 - Blood was collected from the female in VCD treated group of pair 1.

text: Mus musculus

text: Mus musculus

text: Female


text: Blood

text: Mouse

text: Vehicle treated female blood 2 - Blood was collected from the female in Vehicle treated group of pair 2.

text: Mus musculus

text: Mus musculus

text: Female


text: Oocyte

text: Mouse

text: Young oocyte 2 - The oocyte was collected from the female in young group of pari 2.

text: Mus musculus

text: Mus musculus

text: Female


text: Blood

text: Mouse

text: Vehicle treated female blood 1 - Blood was collected from the female in Vehicle treated group of pair 1.

text: Mus musculus

text: Mus musculus

text: Female


text: Blood

text: Mouse

text: Young offspring blood 2 - Blood was collected from the offspring in young group of pair 2.

text: Mus musculus

text: Mus musculus

text: Female


text: Oocyte

text: Mouse

text: Young oocyte 1 - The oocyte was collected from the female in young group of pari 1.

text: Mus musculus

text: Mus musculus

text: Female


text: Blood

text: Mouse

text: Male blood 2 - Blood was collected from the male in pair 2.

text: Mus musculus

text: Mus musculus

text: Male


text: Blood

text: Mouse

text: Young offspring blood 1 - Blood was collected from the offspring in young group of pair 1.

text: Mus musculus

text: Mus musculus

text: Female


text: Blood

text: Mouse

text: Male blood 1 - Blood was collected from the male in pair 1.

text: Mus musculus

text: Mus musculus

text: Male

text: In our study, scWES was employed on oocytes from female mice with different reproductive ages. We also performed whole exome sequencing on bluk blood samples in trios to detect de novo germline variations in oocytes. Both natural aging and accelerated reproductive aging were involved. We demonstrated that genetic alterations, including base variants and structural variations, occurred in mouse oocytes during aging. Genes harboring natural aging or accelerated aging-related de novo germline variants (DNGVs) were almost involved in Ugt1a, V2R, and Mucin gene families. A copy number variant (CNV) associated with chromatin modeling were detected in natural aging oocytes. More importantly, we shortlisted various critical biological functions, like calcium binding pathway and p53 pathways, affected by these aging-related genetic alterations. Our work is the first study to identify genetic alterations in mouse oocytes with in vivo aging and offers a new direction of dissecting the aging mechanisms in oocytes and clarifying genetic causes of lower fertility at advanced maternal age.


text: Oocyte

text: Mouse

text: Natural aging oocyte 2 - The oocyte was collected from the female in natural aging group of pair 2.

text: Mus musculus

text: Mus musculus

text: Female

text: Revealing de novo Age-related Genetic Alterations in Mouse Oocytes through Single-cell Exome Sequencing


text: Blood

text: Mouse

text: VCD treated female blood 2 - Blood was collected from the female in VCD treated group of pair 2.

text: Mus musculus

text: Mus musculus

text: Female


text: Oocyte

text: Mouse

text: Natural aging oocyte 1 - The oocyte was collected from the female in natural aging group of pair 1.

text: Mus musculus

text: Mus musculus

text: Female


text: Blood

text: Mouse

text: Natural aging offspring blood 2 - Blood was collected from the offspring in natural aging group of pair 2.

text: Mus musculus

text: Mus musculus

text: Female


text: Blood

text: Mouse

text: VCD treated female blood 1 - Blood was collected from the female in VCD treated group of pair 1.

text: Mus musculus

text: Mus musculus

text: Female


text: Oocyte

text: Mouse

text: Vehicle treated oocyte 2 - The oocyte was collected from the female in Vehicle treated group of pair 2.

text: Mus musculus

text: Mus musculus

text: Female


text: Oocyte

text: Mouse

text: Vehicle treated oocyte 1 - The oocyte was collected from the female in Vehicle treated group of pair 1.

text: Mus musculus

text: Mus musculus

text: Female


text: Blood

text: Mouse

text: Natural aging offspring blood 1 - Blood was collected from the offspring in natural aging group of pair 1.

text: Mus musculus

text: Mus musculus

text: Female


text: Blood

text: Mouse

text: Young female blood 2 - Blood was collected from the female in young group of pair 2.

text: Mus musculus

text: Mus musculus

text: Female


text: atrioventricular valve right from an adult male texel x blackface sheep, OAR_RI_AM1

text: adult

text: fed

text: normal

text: specimen from organism

characteristic: material

text: Ovis aries

text: tricuspid valve

characteristic: organism part

text: FAANG

characteristic: project

characteristic: specimen collection date

text: The Roslin Institute Sheep Gene Expression Atlas Project

text: Roslin Sheep Atlas


characteristic: SRA accession

text: abomasum from a male 8 week old texel x blackface lamb, OAR_RI_L9

text: juvenile days 45-89

text: fed

text: normal

text: specimen from organism

text: Ovis aries

text: abomasum

text: FAANG

characteristic: specimen collection protocol

characteristic: submission description

text: Roslin Sheep Atlas


text: thyroid from an adult female texel x blackface sheep, OAR_RI_AF2

characteristic: description

text: adult

text: fed

text: normal

text: specimen from organism

text: Ovis aries

text: thyroid gland

text: FAANG

characteristic: submission identifier

text: Roslin Sheep Atlas


text: spleen from an adult male texel x blackface sheep, OAR_RI_AM2

text: adult

text: fed

text: normal

text: specimen from organism

text: Ovis aries

characteristic: organism

text: spleen

text: FAANG

text: Roslin Sheep Atlas

characteristic: submission title


characteristic: animal age at collection

text: thoracic oesophagus from an adult male texel x blackface sheep, OAR_RI_AM1

text: adult

text: fed

text: normal

text: specimen from organism

text: Ovis aries

text: thoracic part of esophagus

text: FAANG

text: Roslin Sheep Atlas


text: leukocyte

text: blood leukocytes from an adult male TxBF sheep

text: cell specimen

text: Ovis aries

text: mixed sample

text: FAANG

text: https://data.faang.org/api/fire_api/samples/ ROSLIN_SOP_Blood Leukocyte Isolation_20160503.pdf

characteristic: purification protocol

text: Roslin Sheep Atlas


text: placentome from a pregnant female texel x blackface sheep at 100 days gestation, OAR_RI_MF7

text: adult

characteristic: developmental stage

text: fed

characteristic: fasted status

characteristic: gestational age at sample collection

text: normal

text: specimen from organism

text: Ovis aries

text: placentome of cotyledonary placenta

text: FAANG

text: Roslin Sheep Atlas


text: P. falciparum isolate from China

text: China

characteristic: geographic location (region and locality)

text: Plasmodium falciparum

text: Plasmodium falciparum

characteristic: scientific name

text: Genome-wide SNPs from P. falciparumused to infer parasite migration in Southeast Asia

text: Genomic structure and diversity of Plasmodium falciparum in Southeast Asia reveal recent parasite migration patterns

Name: Center for Vaccine Development and Global Health

Address: 685 W. Baltimore St., HSF2-480, Baltimore, MD 21201

Shannon Takala-Harrison

FirstName: Shannon

LastName: Takala-Harrison


characteristic: Unique Name Prefix

text: Jing Gao

characteristic: collected by

text: human

characteristic: common name

text: Chinese Gastric cancer sample

text: China

characteristic: geographic location (country and/or sea)

text: Homo sapiens

text: Homo sapiens

text: We proposed a biomarker based on a gene set (RhoA_S) involved in regulation of RhoA activity for association of its mutation(s) with prognosis of GC. The biology featuring this biomarker was explored

text: Mutations in Regulation of RhoA activity pathway in gastric cancer

Computational Oncology Departmet

Address: 5th Floor, Building 3, No.115 Xinjunhuan Road, Minhang District, Shanghai, China 201114

Mu Shuo

FirstName: Mu

LastName: Shuo


W group

characteristic: SRA accession

text: Shigang Yu

characteristic: collection date

text: chicken

text: white skin group

text: China

text: Gallus gallus

text: Gallus gallus

text: Female

characteristic: sex

text: The Agouti signaling protein gene (AISP) is a widely studied pigmentation gene that plays an important role in melanin synthesis. To determine the variety of ASIP expression in the Muchuan black-bone chicken, we examined genetic variation in the ASIP promoter region. A single nucleotide polymorphism (c. -1826 A > T) was found to be associated with the skin color (dorsal and subalar) of black-bone chicken.

text: Black-bone chicken Marker Assisted Selection project

Name: The Key Laboratory of Chicken Genetics and Breeding

Address: No. 778, Binhe Road, shizhong distinct, Leshan, Sichuan, China

Yu Shigang

FirstName: Yu

LastName: Shigang


B group

text: Shigang Yu

text: chicken

text: black skin group

characteristic: description

text: China

text: Gallus gallus

text: Gallus gallus

text: Female

characteristic: submission description

characteristic: submission identifier


characteristic: Average Gestation

text: Ear

characteristic: cell type

text: Pig

text: Sample for QingPing Pig - This sample was part of GWAS and selective sweep analysis

text: China

text: Sus scrofa

characteristic: organism

text: Sus scrofa

text: Female

text: This study offers new insights into pig gestation length phenotype and provides valuable resource to pig breeding and potential to prevent preterm birth.

text: Whole-Genome Sequencing of Qingping pigs identifies signatures of selection and loci associated with short gestation length

characteristic: submission title

Bioinformatics

Address: Building 301, Zone A10 Jiuxianqiao North Road, Chaoyang District, Beijing, China

Li Hong

FirstName: Li

LastName: Hong


text: cultivated cardoon

text: CC-CentofoglieBO - cultivated cardoon

text: Cynara cardunculus var.altilis

text: Cynara cardunculus var.altilis

text: Analyses of Genotyping by Sequencing in globe artichoke, cultivated and wild cardoon.

text: GBS Cynara cardunculus

text: leaf

characteristic: tissue type

Name: Institute of Biosciences and Bioresources

Address: Via Amendola 165/A, 70126 BARI, Italy

Gabriella Sonnante

FirstName: Gabriella

LastName: Sonnante


text: wild cardoon

text: W-SIC1 - wild cardoon

text: Cynara cardunculus var.sylvestris

text: Cynara cardunculus var.sylvestris

text: GBS Cynara cardunculus

text: leaf


text: wild cardoon

text: W-BAS13 - wild cardoon

text: Cynara cardunculus var.sylvestris

text: Cynara cardunculus var.sylvestris

text: GBS Cynara cardunculus

text: leaf


text: globe artichoke

text: Violet_du_Gapeau - globe artichoke

text: Cynara cardunculus var.scolymus

text: Cynara cardunculus var.scolymus

text: GBS Cynara cardunculus

text: leaf


text: globe artichoke

text: Bianco_di_Ostuni - globe artichoke

text: Cynara cardunculus var.scolymus

text: Cynara cardunculus var.scolymus

text: GBS Cynara cardunculus

text: leaf


text: globe artichoke

text: Locale_di_Fasano - globe artichoke

text: Cynara cardunculus var.scolymus

text: Cynara cardunculus var.scolymus

text: GBS Cynara cardunculus

text: leaf


text: globe artichoke

text: Corsica_Orone - globe artichoke

text: Cynara cardunculus var.scolymus

text: Cynara cardunculus var.scolymus

text: GBS Cynara cardunculus

text: leaf


text: cultivated cardoon

text: CC-TUN - cultivated cardoon

text: Cynara cardunculus var.altilis

text: Cynara cardunculus var.altilis

text: GBS Cynara cardunculus

text: leaf


text: cacao

text: unique samples fom a tree - plants from different populations were sequenced for evolutionary analysis

text: Ecuador

text: Theobroma cacao

text: Theobroma cacao

text: Sequencing of 200 cacao accessions to perform evolutionary and assoociation analyses

text: Population genomic analyses of the chocolate tree, Theobroma cacao L., provide insights into its domestication process

Cornejo Lab

Address: PO Box 644236, Heald Hall 429B, Pullman, Washington 99164, USA

Omar Cornejo

FirstName: Omar

LastName: Cornejo


text: cacao

text: Costa Rica

text: Theobroma cacao

text: Theobroma cacao


text: cacao

text: Brazil

text: Theobroma cacao

text: Theobroma cacao


text: cacao

text: Indonesia

text: Theobroma cacao

text: Theobroma cacao


text: cacao

text: Trinidad and Tobago

text: Theobroma cacao

text: Theobroma cacao


Catongo

text: cacao

text: Costa Rica

text: Theobroma cacao

text: Theobroma cacao


text: cacao

text: USA

text: Theobroma cacao

text: Theobroma cacao


Matina

text: cacao

text: Costa Rica

text: Theobroma cacao

text: Theobroma cacao


text: cacao

text: Venezuela

text: Theobroma cacao

text: Theobroma cacao


text: cacao

text: Bolivia

text: Theobroma cacao

text: Theobroma cacao


criollo

text: cacao

text: Costa Rica

text: Theobroma cacao

text: Theobroma cacao


text: cacao

text: Papua New Guinea

text: Theobroma cacao

text: Theobroma cacao


Mocorongo

text: cacao

text: Costa Rica

text: Theobroma cacao

text: Theobroma cacao


text: human

text: Tumor - Normal Sample

text: Homo sapiens

text: Homo sapiens

text: To understand prognostic factors for outcome between differentially sequenced nivolumab and ipilimumab in a randomized phase II trial, T-cell infiltration and PD-L1 by immunohistochemistry, T-cell repertoire metrics and mutational load within the tumor using next-generation sequencing (NGS) were measured and association of those parameters was assessed with response and overall survival

text: Association of Tumor Microenvironment T-Cell Repertoire and Mutational Load With Clinical Outcome After Sequential Checkpoint Blockade in Melanoma

Bristol-Myers Squibb

Address: 311 Pennington-Rocky Hill Rd, Pennington, NJ 08534 USA

Ariella Sasson

FirstName: Ariella

LastName: Sasson


text: alveolar macrophage

text: alveolar macrophages from an adult male TxBF sheep

text: cell specimen

characteristic: material

text: Ovis aries

text: mixed sample

text: FAANG

characteristic: project

text: https://data.faang.org/api/fire_api/samples/ ROSLIN_SOP_Isolation_of_Macrophages_from_Lungs_Blood_and_Bone_Marrow_of_Large_Animals_20160516.pdf

characteristic: purification protocol

text: The Roslin Institute Sheep Gene Expression Atlas Project

text: Roslin Sheep Atlas

BBSRC

Address: Polaris House, North Star Avenue, Swindon, Wiltshire, SN2 1UH

EMBL-EBI

Address: Wellcome Genome Campus, Hinxton, Cambridge, CB10 1SD, United Kingdom

Address: Easter Bush Campus, Edinburgh, Midlothian, EH25 9RG

Alan Archibald

FirstName: Alan

LastName: Archibald

Bruce Whitelaw

FirstName: Bruce

LastName: Whitelaw

David Hume

FirstName: David

LastName: Hume


characteristic: animal age at collection

text: atrioventricular valve left from an adult male texel x blackface sheep, OAR_RI_AM1

text: adult

characteristic: developmental stage

text: fed

characteristic: fasted status

text: normal

characteristic: health status at collection

text: specimen from organism

text: Ovis aries

text: mitral valve

characteristic: organism part

text: FAANG

characteristic: specimen collection date

characteristic: specimen collection protocol

text: Roslin Sheep Atlas

Emily Clark

FirstName: Emily

LastName: Clark

Kim Summers

FirstName: Kim

LastName: Summers

Mary McCulloch

FirstName: Mary

LastName: McCulloch


characteristic: SRA accession

text: vas deferens from an adult male texel x blackface sheep, OAR_RI_AM2

characteristic: description

text: adult

text: fed

text: normal

text: specimen from organism

text: Ovis aries

text: vas deferens

text: FAANG

characteristic: submission description

text: Roslin Sheep Atlas

Mick Watson

FirstName: Mick

LastName: Watson

Stephen Bush

FirstName: Stephen

LastName: Bush


text: jejunum from an adult female texel x blackface sheep, OAR_RI_AF2

text: adult

text: fed

text: normal

text: specimen from organism

text: Ovis aries

text: jejunum

text: FAANG

characteristic: submission identifier

text: Roslin Sheep Atlas


text: ovary from a pregnant female texel x blackface sheep at 23 days gestation, OAR_RI_MF3

text: adult

text: fed

characteristic: gestational age at sample collection

text: normal

text: specimen from organism

text: Ovis aries

characteristic: organism

text: ovary

text: FAANG

text: Roslin Sheep Atlas


text: omasum from an adult female texel x blackface sheep, OAR_RI_AF3

text: adult

text: fed

text: normal

text: specimen from organism

text: Ovis aries

text: omasum

text: FAANG

text: Roslin Sheep Atlas

characteristic: submission title


text: bone marrow macrophage

characteristic: cell type

text: bone marrow macrophage from an adult male TxBF sheep

text: cell specimen

characteristic: material

text: Ovis aries

text: mixed sample

text: FAANG

text: Roslin Sheep Atlas


text: Human

characteristic: common name

text: Homo Sapiens

text: Homo Sapiens

characteristic: scientific name

text: Molecular Determinants of Post-Mastectomy Breast Cancer Recurrence

Name: Sequencing and Microarray Facility, MD Anderson Cancer Center

Address: 1400 Pressler St, Unit 1410, Houston, TX, 77030

Bo Peng

FirstName: Bo

LastName: Peng


text: salmon louse

text: Family C6

text: Salmo salar

characteristic: host

text: Lepeophtheirus salmonis

text: Lepeophtheirus salmonis

text: Mapping Emamectin resistance in salmon lice

Bioinformatics

Address: Institute of Aquaculture, University of Stirling, Stirling, FK9 4LA, Scotland, UK

Michaël Bekaert

FirstName: Michaël

LastName: Bekaert


text: salmon louse

text: Family C9

text: Salmo salar

text: Lepeophtheirus salmonis

text: Lepeophtheirus salmonis


text: salmon louse

text: Strain IoA-00

text: Salmo salar

text: Lepeophtheirus salmonis

text: Lepeophtheirus salmonis

characteristic: strain


text: salmon louse

text: Strain IoA-02

text: Salmo salar

text: Lepeophtheirus salmonis

text: Lepeophtheirus salmonis


text: Human

text: MSK-IMPACT sample: 4173

text: Homo sapiens

text: Homo sapiens

characteristic: subject

text: A study of selection for mutant allele imbalance in cancer

text: Allelic imbalance in the MSK-IMPACT Clinical Sequencing Cohort

Taylor lab

Address: 1275 York Ave, New York, NY 10065

Barry Taylor

FirstName: Barry

LastName: Taylor


text: Human

text: MSK-IMPACT sample: 1836

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 376

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 12178

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 6916

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 12902

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 7639

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 13269

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 2511

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 2997

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 8791

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 6986

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 4972

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 10927

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 647

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 12649

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 351

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 3870

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 1626

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 9470

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 425

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 13209

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 12440

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 9782

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 3298

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 11653

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 5452

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 1984

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 7971

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 3950

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 10839

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 8224

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 9014

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 9491

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 10041

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 2185

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 3055

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 1903

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 6513

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 6912

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 4795

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 3563

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 3930

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 4751

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 5728

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 11634

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 9801

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 12393

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 6582

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 12104

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 9700

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 6091

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 13185

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 11594

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 12130

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 11383

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 2736

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 12373

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 4511

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 8448

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 668

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 8468

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 8515

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 1961

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 6779

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 12979

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 13401

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 3640

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 8985

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 3669

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 10746

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 2969

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 5027

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 11122

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 2759

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 2168

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 12628

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 4993

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 1159

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 8250

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 10064

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 13098

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 3354

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 9594

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 623

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 11909

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 7098

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 1995

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 1191

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 11849

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 6112

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 8421

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 12349

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 2123

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 8202

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 9528

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 5787

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 9249

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 10813

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 7614

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 4955

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 3037

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 10029

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 6963

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 6466

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 9034

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 3970

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 392

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 13234

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 3899

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 4816

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 4308

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 690

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 1602

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 818

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 448

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 5465

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 1229

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 13289

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 6897

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 5589

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 12466

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 4281

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 4771

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 7678

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 8164

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 10201

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 4274

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 1917

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 11352

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 1171

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 10255

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 9510

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 2624

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 1939

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 10556

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 2464

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 3279

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 11359

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 3332

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 7467

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 10274

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 4231

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 10085

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 48

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 148

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 9368

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 70

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 8736

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 2489

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 3321

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 11134

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 4258

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 5815

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 3373

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 7948

text: Homo sapiens

text: Homo sapiens


text: Human

text: MSK-IMPACT sample: 5485

text: Homo sapiens

text: Homo sapiens