text: wheat

characteristic: common name

text: exome sequences of ExomeCapture-TA-12197 - Accession Name = '.'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

characteristic: description

text: 2 week old

text: not provided

text: Thinopyrum elongatum

characteristic: organism

text: Thinopyrum elongatum

characteristic: scientific name

text: leaf


status: PUBLIC

characteristic: SRA accession

text: 1979 Egypt by Abdalla, F., University of Assiut. DONATED 05/04/1988 by Moseman, J., USDA-ARS

characteristic: collected by

text: bread wheat

characteristic: cultivar

text: USDA GRIN

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-003502 - Accession Name = '1014'; Remarks = 'Resistance to powdery mildew (Erysiphe graminis).'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

characteristic: dev stage

text: spring wheat

characteristic: ecotype

text: Egypt

characteristic: geographic location (country and/or sea)

text: PI 532070

characteristic: material

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 532070

characteristic: specimen voucher

text: subsp. aestivum

characteristic: sub species

text: The exome sequenced hexaploid wheat accessions were selected from a worldwide population of landraces and cultivars obtained from the USDA National Small Grains Collection and the Australian Grains Genebank (formally the Australian Winter Cereal Collection). The worldwide population comprised 3990 accessions from 106 countries that were genotyped using the Infinium iSelect 90K SNP wheat bead chip array. The MCG method was used to select accessions for exome sequencing. This method uses a genetic relationship matrix calculated from genotype data to iteratively chose and arbitrary number of accessions (in the case of this study 20% of the accessions) that collectively explain the largest proportion of variance in genetic relationships among the whole set. Genomic DNA was extracted from leaf tissue for each accession using the Agencourt DNAdvance Genomic DNA Isolation Kit (Beckman Coulter) and subjected to sequence capture using the NimbleGen SeqCap EZ wheat whole genome assay. In brief, 1 µg of DNA was fragmented with the Covaris S2 instrument to obtain an average fragment length of 300 bp. Shorter fragments were removed using Agencourt AMPure XP beads (Beckman Coulter). The KAPA Library Preparation Kit (Kapa Biosystems) and adapters supplied in the NimbleGen SeqCap EZ Reagent Kit Plus v2 (Roche) were used to prepare sample libraries for the capture assay, according to the KAPA protocol but excluding steps 8.1-8.22. The quality and yield of each sample library was assessed using an Agilent 2200 TapeStation (Agilent Technologies) before proceeding to the sequence capture assay following the Roche protocol. Each target capture sequence enriched sample library was sequenced on an Illumina HiSeq2000 instrument (Illumina) to generate about 30 million reads per accession. The project leaders are Matthew Hayden (Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, Victoria, Australia; La Trobe University, Bundoora, Victoria, Australia) and Eduard Akhunov (Kansas State University, USA). More information can be found on our project website at http://wheatgenomics.plantpath.ksu.edu/1000EC

characteristic: submission description

characteristic: submission identifier

text: Exome sequencing of diverse collection of wheat landraces, cultivars and breeding lines

characteristic: submission title

text: leaf

characteristic: tissue type

characteristic: variety

type: has member

Eduard Akhunov

Address: 1712 Claflin Road, Department of Plant Pathology, Kansas State University, Manhattan, KS 66506, USA

Fei He

FirstName: Fei

LastName: He


text: Georgia by Dekaprelevitch, L., Botanical Garden

text: bread wheat

characteristic: common name

text: CI 7092

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-003574 - Accession Name = 'CI 7092'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '42,43.3,.'; Ancestry = '.'

characteristic: description

text: 2 week old

text: spring wheat

text: Georgia

text: Government of Tiflis

characteristic: geographic location (region and locality)

characteristic: lat lon

text: PI 57145

text: Triticum aestivum subsp. aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 57145

text: subsp. aestivum

text: leaf

text: :CItr 7092;:CI 7092


characteristic: SRA accession

text: bread wheat

text: PORTUGAL 55

characteristic: cultivar

text: AWCC

characteristic: culture collection

text: exome sequences of ExomeCapture-WATKINS-007500 - Accession Name = 'PORTUGAL 55'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Portugal

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: subsp. aestivum

text: leaf


text: bread wheat

text: KLEIN TRIUNFO

text: AWCC

text: exome sequences of ExomeCapture-DAS5-002594 - Accession Name = 'KLEIN TRIUNFO'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

characteristic: dev stage

text: Argentina

characteristic: geographic location (country and/or sea)

characteristic: material

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


text: 1946 Cape Province, South Africa by Winter Rainfall Region Station

characteristic: collected by

text: bread wheat

text: Sonop

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-001866 - Accession Name = 'Sonop'; Remarks = '.'; Released = '1946'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Kleintrou/Pelgrim'

text: 2 week old

text: spring wheat

characteristic: ecotype

text: South Africa

text: PI 227060

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 227060

characteristic: specimen voucher

text: subsp. aestivum

characteristic: sub species

characteristic: submission description

text: leaf

text: :Sonop


text: New South Wales, Australia by Department of Agriculture

text: pasta wheat

characteristic: common name

text: G 51/65

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-003337 - Accession Name = 'G 51/65'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Hurani/Mindum'

text: 2 week old

text: spring wheat

text: Australia

text: PI 209277

text: Triticum turgidum subsp. durum

text: Triticum turgidum subsp. durum

text: USDA GRIN:PI 209277

text: subsp. durum

characteristic: submission identifier

characteristic: submission title

text: leaf

characteristic: tissue type

text: :G 51/65;:ICARDA-IG-86483

characteristic: variety


characteristic: SRA accession

text: Denmark by Andersen, K., Royal Agricultural School

text: dinkel wheat

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-003493 - Accession Name = 'DN-2269'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

characteristic: description

text: 2 week old

text: spring wheat

text: Denmark

text: PI 361813

text: Triticum aestivum subsp. spelta

characteristic: organism

text: Triticum aestivum subsp. spelta

text: USDA GRIN:PI 361813

text: subsp. spelta

text: leaf


text: pasta wheat

text: TULUN 547

characteristic: cultivar

text: AWCC

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-003142 - Accession Name = 'TULUN 547'; Remarks = 'Hard / Red'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Russia

text: Triticum turgidum subsp. durum

text: Triticum turgidum subsp. durum

characteristic: scientific name

text: subsp. durum

text: leaf


text: bread wheat

text: AWCC

text: exome sequences of ExomeCapture-DAS5-002249 - Accession Name = 'CPI133872'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

characteristic: dev stage

text: Mexico

characteristic: geographic location (country and/or sea)

characteristic: material

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


text: Rift Valley, Kenya by Plant Breeding Station

characteristic: collected by

text: bread wheat

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-003744 - Accession Name = '358-P.6.A'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Kenya 184/Kenya 294'

text: 2 week old

text: spring wheat

characteristic: ecotype

text: Kenya

text: PI 238403

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 238403

characteristic: specimen voucher

text: subsp. aestivum

text: leaf


text: Netherlands by Wageningen Agricultural University

text: bread wheat

characteristic: common name

text: Nowinka

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-001708 - Accession Name = 'Nowinka'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Ladoga/Red Fife//Prelude'

text: 2 week old

text: F

text: Netherlands

text: PI 295995

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 295995

text: subsp. aestivum

characteristic: sub species

characteristic: submission description

text: leaf

text: :Nowinka


text: Former Soviet Union by. DEVELOPED Bulgaria by North Bulgaria Exp. Station. DONATED 11/20/1930 by Dickson, J., USDA-Bureau of Plant Industry

text: bread wheat

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-001154 - Accession Name = '93'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Hybrid native/No. 16'

text: 2 week old

text: F

text: Bulgaria

text: PI 94412

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 94412

text: subsp. aestivum

text: The exome sequenced hexaploid wheat accessions were selected from a worldwide population of landraces and cultivars obtained from the USDA National Small Grains Collection and the Australian Grains Genebank (formally the Australian Winter Cereal Collection). The worldwide population comprised 3990 accessions from 106 countries that were genotyped using the Infinium iSelect 90K SNP wheat bead chip array. The MCG method was used to select accessions for exome sequencing. This method uses a genetic relationship matrix calculated from genotype data to iteratively chose and arbitrary number of accessions (in the case of this study 20% of the accessions) that collectively explain the largest proportion of variance in genetic relationships among the whole set. Genomic DNA was extracted from leaf tissue for each accession using the Agencourt DNAdvance Genomic DNA Isolation Kit (Beckman Coulter) and subjected to sequence capture using the NimbleGen SeqCap EZ wheat whole genome assay. In brief, 1 µg of DNA was fragmented with the Covaris S2 instrument to obtain an average fragment length of 300 bp. Shorter fragments were removed using Agencourt AMPure XP beads (Beckman Coulter). The KAPA Library Preparation Kit (Kapa Biosystems) and adapters supplied in the NimbleGen SeqCap EZ Reagent Kit Plus v2 (Roche) were used to prepare sample libraries for the capture assay, according to the KAPA protocol but excluding steps 8.1-8.22. The quality and yield of each sample library was assessed using an Agilent 2200 TapeStation (Agilent Technologies) before proceeding to the sequence capture assay following the Roche protocol. Each target capture sequence enriched sample library was sequenced on an Illumina HiSeq2000 instrument (Illumina) to generate about 30 million reads per accession. The project leaders are Matthew Hayden (Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, Victoria, Australia; La Trobe University, Bundoora, Victoria, Australia) and Eduard Akhunov (Kansas State University, USA). More information can be found on our project website at http://wheatgenomics.plantpath.ksu.edu/1000EC

characteristic: submission identifier

text: Exome sequencing of diverse collection of wheat landraces, cultivars and breeding lines

characteristic: submission title

text: leaf

characteristic: tissue type


characteristic: SRA accession

text: bread wheat

text: NAVARRE 48

text: AWCC

text: exome sequences of ExomeCapture-WATKINS-007449 - Accession Name = 'NAVARRE 48'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

characteristic: description

text: 2 week old

text: spring wheat

text: Spain

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf

characteristic: variety


text: bread wheat

characteristic: cultivar

text: AVS

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-000091 - Accession Name = 'Aus30268/annuello*10'; Remarks = 'BC1F4 selection'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Aus30268/annuello'

text: 2 week old

text: spring wheat

text: Australia

text: Triticum aestivum subsp. aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf

text: Aus30268 = GREEE.SQUARROSA (458)


text: bread wheat

text: AVS

text: exome sequences of ExomeCapture-DAS5-000694 - Accession Name = 'Aus30281/2*Annuello*4'; Remarks = 'BC2F4 selection'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Aus30281/2*Annuello'

text: 2 week old

characteristic: dev stage

text: spring wheat

text: Australia

characteristic: geographic location (country and/or sea)

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: subsp. aestivum

text: leaf

text: Aus30281 = STY-US/CELTA//PALS/3/SRN_5/4/AE.SQUARROSA (277)


text: bread wheat

text: Derrimut

text: AWCC

text: exome sequences of ExomeCapture-DAS5-DERRIMUT - Accession Name = 'Derrimut'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

characteristic: ecotype

text: Australia

characteristic: material

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


text: bread wheat

characteristic: common name

text: ALGERIA 8

text: AWCC

text: exome sequences of ExomeCapture-WATKINS-007122 - Accession Name = 'ALGERIA 8'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Algeria

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

characteristic: specimen voucher

text: subsp. aestivum

text: leaf


text: bread wheat

text: FRANCE 26

text: AWCC

text: exome sequences of ExomeCapture-WATKINS-007316 - Accession Name = 'FRANCE 26'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: France

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: sub species

characteristic: submission description

text: leaf


text: 06/05/1979 Bheri, Nepal by Erskine, W., IBPGR, FAO; Shrestha, P., IBPGR; Bourgois, J., IBPGR

characteristic: collected by

text: bread wheat

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-003874 - Accession Name = '145'; Remarks = 'Awnless. Seeds white or red.'; Released = '.'; Lattitude,Longitude,Elevation = '28.8,82.36666667,950'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Nepal

text: Bheri;Chaur, Jajarkot, Bheri

characteristic: geographic location (region and locality)

characteristic: lat lon

text: PI 445734

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 445734

text: subsp. aestivum

characteristic: submission identifier

characteristic: submission title

text: leaf

text: :145;:FAO 51.874


characteristic: SRA accession

text: bread wheat

characteristic: cultivar

text: exome sequences of ExomeCapture-WSC-3-7 - Accession Name = 'UC1041+Yr5+Yr15+2ns+gpc+lr47'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Breeding line'

characteristic: description

text: 2 week old

text: USA

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf

characteristic: tissue type


text: Iraq by Springfield, H., U.S. Operations Mission to Iraq

text: bread wheat

text: Hawasia

text: USDA GRIN

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-001458 - Accession Name = 'Hawasia'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

characteristic: dev stage

text: spring wheat

text: Iraq

characteristic: geographic location (country and/or sea)

text: PI 208894

text: Triticum aestivum subsp. aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 208894

text: subsp. aestivum

text: leaf

text: :Hawasia

characteristic: variety


text: bread wheat

characteristic: common name

text: Berkut

text: exome sequences of ExomeCapture-WSC-6-9 - Accession Name = 'Berkut'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

characteristic: ecotype

text: Mexico

text: Berkut

characteristic: material

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: Berkut

characteristic: specimen voucher

text: subsp. aestivum

text: leaf


text: bread wheat

text: AVS

text: exome sequences of ExomeCapture-DAS5-000123 - Accession Name = 'Aus30272/annuello*3'; Remarks = 'BC1F4 selection'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Aus30272/annuello'

text: 2 week old

text: spring wheat

text: Australia

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: sub species

characteristic: submission description

text: leaf

text: Aus30272 = DOY1/AE.SQUARROSA (177)


text: pasta wheat

text: DON SKAYA

text: AWCC

text: exome sequences of ExomeCapture-DAS5-002301 - Accession Name = 'DON SKAYA'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: Russia

text: Triticum turgidum subsp. durum

text: Triticum turgidum subsp. durum

text: subsp. durum

characteristic: submission identifier

characteristic: submission title

text: leaf


characteristic: SRA accession

text: Minnesota, United States by Zhang, X., University of Minnesota

characteristic: collected by

text: bread wheat

characteristic: cultivar

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-001756 - Accession Name = 'PI351993-sel-fhb'; Remarks = 'Resistance to Fusarium Head Blight (Fusarium graminearum).'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'selection from PI 351993'

text: 2 week old

text: spring wheat

text: USA

text: PI 644146

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 644146

text: subsp. aestivum

text: The exome sequenced hexaploid wheat accessions were selected from a worldwide population of landraces and cultivars obtained from the USDA National Small Grains Collection and the Australian Grains Genebank (formally the Australian Winter Cereal Collection). The worldwide population comprised 3990 accessions from 106 countries that were genotyped using the Infinium iSelect 90K SNP wheat bead chip array. The MCG method was used to select accessions for exome sequencing. This method uses a genetic relationship matrix calculated from genotype data to iteratively chose and arbitrary number of accessions (in the case of this study 20% of the accessions) that collectively explain the largest proportion of variance in genetic relationships among the whole set. Genomic DNA was extracted from leaf tissue for each accession using the Agencourt DNAdvance Genomic DNA Isolation Kit (Beckman Coulter) and subjected to sequence capture using the NimbleGen SeqCap EZ wheat whole genome assay. In brief, 1 µg of DNA was fragmented with the Covaris S2 instrument to obtain an average fragment length of 300 bp. Shorter fragments were removed using Agencourt AMPure XP beads (Beckman Coulter). The KAPA Library Preparation Kit (Kapa Biosystems) and adapters supplied in the NimbleGen SeqCap EZ Reagent Kit Plus v2 (Roche) were used to prepare sample libraries for the capture assay, according to the KAPA protocol but excluding steps 8.1-8.22. The quality and yield of each sample library was assessed using an Agilent 2200 TapeStation (Agilent Technologies) before proceeding to the sequence capture assay following the Roche protocol. Each target capture sequence enriched sample library was sequenced on an Illumina HiSeq2000 instrument (Illumina) to generate about 30 million reads per accession. The project leaders are Matthew Hayden (Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, Victoria, Australia; La Trobe University, Bundoora, Victoria, Australia) and Eduard Akhunov (Kansas State University, USA). More information can be found on our project website at http://wheatgenomics.plantpath.ksu.edu/1000EC

text: leaf

text: :PI351993-sel-fhb;USA126:NSGC 18010


text: 1938 Miyazaki, Japan by. DONATED 07/1946 by Salmon, S., USDA-Bureau of Plant Industry

text: bread wheat

text: Norin 36

text: USDA GRIN

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-001696 - Accession Name = 'Norin 36'; Remarks = '.'; Released = '1938'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Shinchunaga/Eshimashinriki'

characteristic: description

text: 2 week old

text: spring wheat

text: Japan

text: PI 155269

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 155269

text: subsp. aestivum

text: Exome sequencing of diverse collection of wheat landraces, cultivars and breeding lines

text: leaf

characteristic: tissue type

text: :Norin 36;:Komugi Nourin 36;:Minamikyushu 12


text: Croatia by Institute for Research in Plant Production

text: bread wheat

text: ZG 884/73

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-004640 - Accession Name = 'ZG 884/73'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Zg 6877-61/T. timpheevii//Abondanza'

text: 2 week old

characteristic: dev stage

text: spring wheat

text: Croatia

characteristic: geographic location (country and/or sea)

text: PI 415182

text: Triticum aestivum subsp. aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 415182

text: subsp. aestivum

text: leaf

text: :ZG 884/73


text: 09/07/1939 Samangan, Afghanistan by Koelz, W., USDA-Bureau of Plant Industry

text: bread wheat

characteristic: common name

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-003279 - Accession Name = '4617'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '35.90611111,67.28666667,1340'; Ancestry = '.'

text: 2 week old

text: spring wheat

characteristic: ecotype

text: Afghanistan

text: Samangan;Kala Sarkari

characteristic: geographic location (region and locality)

characteristic: lat lon

text: PI 135048

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 135048

text: subsp. aestivum

text: leaf

text: :4617;:ICARDA-IG-84016;:AUS 7866;:AUS 10721;:AUS 10720;:AUS 7867

characteristic: variety


text: Cyprus by Ministry of Agriculture and Natural Res.

text: bread wheat

text: Croisement

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-001320 - Accession Name = 'Croisement'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Cyprus

text: PI 210969

characteristic: material

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: USDA GRIN:PI 210969

characteristic: specimen voucher

text: subsp. aestivum

characteristic: sub species

characteristic: submission description

text: leaf

text: :Croisement


characteristic: SRA accession

text: bread wheat

text: Lang

characteristic: cultivar

text: AWCC

text: exome sequences of ExomeCapture-DAS5-LANG - Accession Name = 'Lang'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Australia

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission identifier

characteristic: submission title

text: leaf


text: Washington, United States by Allan, R., USDA-ARS

characteristic: collected by

text: bread wheat

text: 97ARS 136

text: USDA GRIN

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-004173 - Accession Name = '97ARS 136'; Remarks = 'F3:6, BC6 near-isoline with normal height gene Rht B1a of Olympia, a tall semihard, white winter Finish cv. Sib to NILs with Rht B1c gene of Tom Thumb in Olympia background. Similar to Olympia for spike lax, fusiform, awnletted. Glumes brown. Kernels white, midlong. Germ midsize. Agronomically similar to Olympia for plant ht., heading, grain yield, kernel wt., kernels/spike, test wt., lodging.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Olympia*5///Tom Thumb/7*Burt//2*Olympia, 97136'

characteristic: description

text: 2 week old

characteristic: dev stage

text: spring wheat

text: USA

text: PI 615635

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 615635

text: subsp. aestivum

text: leaf

characteristic: tissue type

text: :97ARS 136;:96 1165


text: bread wheat

characteristic: common name

text: AVS

text: exome sequences of ExomeCapture-DAS5-000472 - Accession Name = 'Aus34434/annuello*16'; Remarks = 'BC1F4 selection'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Aus34434/annuello'

text: 2 week old

text: spring wheat

characteristic: ecotype

text: Australia

characteristic: geographic location (country and/or sea)

text: Triticum aestivum subsp. aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf

text: Aus34434 = 68.111/RGB-U//WARD RESEL/3/STIL/4/AE.SQUARROSA (449)


text: bread wheat

text: AVS

text: exome sequences of ExomeCapture-DAS5-000015 - Accession Name = 'Aus29639/yitpi*37'; Remarks = 'BC1F4 selection'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Aus29639/yitpi'

text: 2 week old

text: spring wheat

text: Australia

characteristic: material

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: subsp. aestivum

text: The exome sequenced hexaploid wheat accessions were selected from a worldwide population of landraces and cultivars obtained from the USDA National Small Grains Collection and the Australian Grains Genebank (formally the Australian Winter Cereal Collection). The worldwide population comprised 3990 accessions from 106 countries that were genotyped using the Infinium iSelect 90K SNP wheat bead chip array. The MCG method was used to select accessions for exome sequencing. This method uses a genetic relationship matrix calculated from genotype data to iteratively chose and arbitrary number of accessions (in the case of this study 20% of the accessions) that collectively explain the largest proportion of variance in genetic relationships among the whole set. Genomic DNA was extracted from leaf tissue for each accession using the Agencourt DNAdvance Genomic DNA Isolation Kit (Beckman Coulter) and subjected to sequence capture using the NimbleGen SeqCap EZ wheat whole genome assay. In brief, 1 µg of DNA was fragmented with the Covaris S2 instrument to obtain an average fragment length of 300 bp. Shorter fragments were removed using Agencourt AMPure XP beads (Beckman Coulter). The KAPA Library Preparation Kit (Kapa Biosystems) and adapters supplied in the NimbleGen SeqCap EZ Reagent Kit Plus v2 (Roche) were used to prepare sample libraries for the capture assay, according to the KAPA protocol but excluding steps 8.1-8.22. The quality and yield of each sample library was assessed using an Agilent 2200 TapeStation (Agilent Technologies) before proceeding to the sequence capture assay following the Roche protocol. Each target capture sequence enriched sample library was sequenced on an Illumina HiSeq2000 instrument (Illumina) to generate about 30 million reads per accession. The project leaders are Matthew Hayden (Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, Victoria, Australia; La Trobe University, Bundoora, Victoria, Australia) and Eduard Akhunov (Kansas State University, USA). More information can be found on our project website at http://wheatgenomics.plantpath.ksu.edu/1000EC

text: leaf

text: Aus29639 = CETA/AE.SQUARROSA (230)

characteristic: variety


text: 07/08/1985 Errachidia, Morocco by Guarino, L., International Plant Genetic Resources Institute

text: bread wheat

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-004663 - Accession Name = '1258'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '32.21666667,-5.63333333,1600'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Morocco

text: Errachidia;5km N of Imilchil

characteristic: geographic location (region and locality)

characteristic: lat lon

text: PI 525442

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 525442

characteristic: specimen voucher

text: subsp. aestivum

characteristic: sub species

characteristic: submission description

text: leaf


characteristic: SRA accession

text: Italy by. DONATED 02/11/1949 by Institute de la Recherche Agronomique

characteristic: collected by

text: bread wheat

text: Gentil Rosso

characteristic: cultivar

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-004421 - Accession Name = 'Gentil Rosso'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: F

text: Italy

text: PI 174639

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 174639

text: subsp. aestivum

characteristic: submission identifier

text: Exome sequencing of diverse collection of wheat landraces, cultivars and breeding lines

characteristic: submission title

text: leaf

text: :Gentil Rosso


text: pasta wheat

characteristic: common name

text: H 29 A 13781

text: AWCC

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-002437 - Accession Name = 'H 29 A 13781'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

characteristic: description

text: 2 week old

characteristic: dev stage

text: Portugal

text: Triticum turgidum subsp. durum

text: Triticum turgidum subsp. durum

text: subsp. durum

text: leaf

characteristic: tissue type


text: bread wheat

text: CHINA 19

text: AWCC

text: exome sequences of ExomeCapture-WATKINS-007209 - Accession Name = 'CHINA 19'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

characteristic: ecotype

text: China

characteristic: geographic location (country and/or sea)

text: PEKING;Yuan Hsing Sheng General Store, Peking

characteristic: material

text: Triticum aestivum subsp. aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: subsp. aestivum

text: leaf


text: bread wheat

text: GS50A T41.1

text: AWCC

text: exome sequences of ExomeCapture-DAS5-002004 - Accession Name = 'GS50A T41.1'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Mexico

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

characteristic: specimen voucher

text: subsp. aestivum

characteristic: sub species

text: leaf

characteristic: variety


characteristic: SRA accession

text: bread wheat

text: POLAND 19

text: AWCC

text: exome sequences of ExomeCapture-DAS5-002869 - Accession Name = 'POLAND 19'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: Poland

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission description

text: leaf


text: Syria by Int. Center for Agricultural Research in the Dry Areas. COLLECTED United States by Scharen, A., USDA-ARS

characteristic: collected by

text: bread wheat

characteristic: cultivar

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-001152 - Accession Name = '91IBRST-12'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'IAS58/IAS55//Alondra sib/3/MaringaG/4/Alondra sib/IAS58.103A/Alondra sib'

text: 2 week old

text: spring wheat

text: Syria

text: PI 574250

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 574250

text: subsp. aestivum

characteristic: submission identifier

text: leaf

text: :91IBRST-12;:917168;:NSGC 1133


text: North Kazakhstan, Kazakhstan by. DONATED 09/07/1977 by N.I. Vavilov Institute of Plant Industry

text: bread wheat

characteristic: common name

text: Krasnovodopadskaja 210

text: USDA GRIN

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-004472 - Accession Name = 'Krasnovodopadskaja 210'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Krasnovopodskaja 49/BI-MA 1//Bezostaja 1'

text: 2 week old

text: winter wheat

text: Kazakhstan

text: PI 420646

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 420646

text: subsp. aestivum

characteristic: submission title

text: leaf

text: :Krasnovodopadskaja 210;:WIR 51729


text: bread wheat

text: AVS

text: exome sequences of ExomeCapture-DAS5-000504 - Accession Name = 'Aus34438/annuello*2'; Remarks = 'BC1F4 selection'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Aus34438/annuello'

characteristic: description

text: 2 week old

characteristic: dev stage

text: spring wheat

text: Australia

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf

characteristic: tissue type

text: Aus34438 = CPI/GEDIZ/3/GOO//JO69/CRA/4/AE.SQUARROSA (633)


text: pasta wheat

text: BIJAGA YELLOW

text: AWCC

text: exome sequences of ExomeCapture-DAS5-002138 - Accession Name = 'BIJAGA YELLOW'; Remarks = 'Hard / White'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

characteristic: ecotype

text: India

characteristic: geographic location (country and/or sea)

characteristic: material

text: Triticum turgidum subsp. durum

text: Triticum turgidum subsp. durum

text: subsp. durum

text: The exome sequenced hexaploid wheat accessions were selected from a worldwide population of landraces and cultivars obtained from the USDA National Small Grains Collection and the Australian Grains Genebank (formally the Australian Winter Cereal Collection). The worldwide population comprised 3990 accessions from 106 countries that were genotyped using the Infinium iSelect 90K SNP wheat bead chip array. The MCG method was used to select accessions for exome sequencing. This method uses a genetic relationship matrix calculated from genotype data to iteratively chose and arbitrary number of accessions (in the case of this study 20% of the accessions) that collectively explain the largest proportion of variance in genetic relationships among the whole set. Genomic DNA was extracted from leaf tissue for each accession using the Agencourt DNAdvance Genomic DNA Isolation Kit (Beckman Coulter) and subjected to sequence capture using the NimbleGen SeqCap EZ wheat whole genome assay. In brief, 1 µg of DNA was fragmented with the Covaris S2 instrument to obtain an average fragment length of 300 bp. Shorter fragments were removed using Agencourt AMPure XP beads (Beckman Coulter). The KAPA Library Preparation Kit (Kapa Biosystems) and adapters supplied in the NimbleGen SeqCap EZ Reagent Kit Plus v2 (Roche) were used to prepare sample libraries for the capture assay, according to the KAPA protocol but excluding steps 8.1-8.22. The quality and yield of each sample library was assessed using an Agilent 2200 TapeStation (Agilent Technologies) before proceeding to the sequence capture assay following the Roche protocol. Each target capture sequence enriched sample library was sequenced on an Illumina HiSeq2000 instrument (Illumina) to generate about 30 million reads per accession. The project leaders are Matthew Hayden (Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, Victoria, Australia; La Trobe University, Bundoora, Victoria, Australia) and Eduard Akhunov (Kansas State University, USA). More information can be found on our project website at http://wheatgenomics.plantpath.ksu.edu/1000EC

text: leaf


text: Europe by

text: bread wheat

text: No name 4 - Europe

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-004507 - Accession Name = 'No name 4 - Europe'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: winter wheat

text: not provided

text: not provided

characteristic: geographic location (region and locality)

text: PI 254043

text: Triticum aestivum subsp. aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: USDA GRIN:PI 254043

characteristic: specimen voucher

text: subsp. aestivum

text: leaf


characteristic: SRA accession

text: bread wheat

text: AWCC

text: exome sequences of ExomeCapture-WATKINS-007472 - Accession Name = 'Aus27937'; Remarks = 'Hard / Red'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Canada

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: sub species

characteristic: submission description

text: leaf

characteristic: variety


text: bread wheat

characteristic: common name

text: AFGHANISTAN 2

characteristic: cultivar

text: AWCC

text: exome sequences of ExomeCapture-WATKINS-007770 - Accession Name = 'AFGHANISTAN 2'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Afghanistan

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission identifier

text: leaf


text: Tolbukhin, Bulgaria by Institute for Wheat & Sunflower Research

characteristic: collected by

text: bread wheat

text: USDA GRIN

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-003419 - Accession Name = '5989-1'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

characteristic: description

text: 2 week old

text: spring wheat

text: Bulgaria

text: PI 564351

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 564351

text: subsp. aestivum

text: Exome sequencing of diverse collection of wheat landraces, cultivars and breeding lines

characteristic: submission title

text: leaf


text: Colombia by Escuro, P., College of Agriculture

text: bread wheat

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-003468 - Accession Name = '13340'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

characteristic: dev stage

text: spring wheat

characteristic: ecotype

text: Colombia

characteristic: geographic location (country and/or sea)

text: PI 378910

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 378910

text: subsp. aestivum

text: leaf

characteristic: tissue type


text: bread wheat

text: Strzelecki

text: AWCC

text: exome sequences of ExomeCapture-DAS5-STRZELECKI - Accession Name = 'Strzelecki'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Australia

characteristic: material

text: Triticum aestivum subsp. aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: subsp. aestivum

text: leaf


characteristic: SRA accession

text: pasta wheat

text: MESTNAIA

text: AWCC

text: exome sequences of ExomeCapture-DAS5-002735 - Accession Name = 'MESTNAIA'; Remarks = 'Brown'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Azerbaijan

text: Triticum turgidum subsp. durum

text: Triticum turgidum subsp. durum

characteristic: specimen voucher

text: subsp. durum

characteristic: sub species

text: leaf


text: Carinthia, Austria by Yesilkoy Seed Improvement Station. DONATED 01/11/1962 by Dept. of Scientific & Industrial Res.

text: bread wheat

characteristic: common name

text: Dr. Lassers Hellkorn

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-004389 - Accession Name = 'Dr. Lassers Hellkorn'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Thatcher/Kronen'

text: 2 week old

text: winter wheat

text: Austria

text: PI 278186

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 278186

text: subsp. aestivum

characteristic: submission description

text: leaf

text: :Dr. Lassers Hellkorn

characteristic: variety


text: Lima, Peru by Universidad Agraria

characteristic: collected by

text: bread wheat

characteristic: cultivar

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-003909 - Accession Name = '60'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'McMurachy Minn. 2698/Baladi'

text: 2 week old

text: spring wheat

text: Peru

text: PI 205722

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 205722

text: subsp. aestivum

characteristic: submission identifier

text: leaf


text: bread wheat

text: USDA GRIN

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-003415 - Accession Name = '178/89'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

characteristic: description

text: 2 week old

text: spring wheat

text: Bulgaria

text: PI 564312

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 564312

text: subsp. aestivum

characteristic: submission title

text: leaf


text: bread wheat

text: exome sequences of ExomeCapture-WSC-3-12 - Accession Name = 'patwin+yr5+yr15+2ns'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Breeding line'

text: 2 week old

characteristic: dev stage

text: spring wheat

characteristic: ecotype

text: USA

characteristic: geographic location (country and/or sea)

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


text: 1995 Indiana, United States by Ohm, H., Purdue University; Johnson, J., University of Georgia - Griffin Campus; Patterson, F., Purdue University; Wickersham, D., DeKalb Genetics

text: bread wheat

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-004550 - Accession Name = 'PR267'; Remarks = 'Soft red winter R-line developed in a cms Arthur background with Triticum timopheevi cytoplasm and restorer gene(s) from TBR26-6-4. The TBR (Texas bulk restorer) line has an unknown source of male fertility restorer genes. Awnletted and 1 day later than Monon and 2 days earlier than Abe in heading. Resistant to powdery mildew. Selected for ability to restore male fertility in F1 hybrids with cms Monon and cms Redcoat.'; Released = '1995'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'cms Arthur*3/TBR26-6-4'

text: 2 week old

text: winter wheat

text: USA

text: PI 591555

characteristic: material

text: Triticum aestivum subsp. aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 591555

text: subsp. aestivum

text: leaf

characteristic: tissue type


characteristic: SRA accession

text: bread wheat

text: AVS

text: exome sequences of ExomeCapture-DAS5-000148 - Accession Name = 'Aus30278/annuello*40'; Remarks = 'BC1F4 selection'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Aus30278/annuello'

text: 2 week old

text: spring wheat

text: Australia

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

characteristic: specimen voucher

text: subsp. aestivum

text: The exome sequenced hexaploid wheat accessions were selected from a worldwide population of landraces and cultivars obtained from the USDA National Small Grains Collection and the Australian Grains Genebank (formally the Australian Winter Cereal Collection). The worldwide population comprised 3990 accessions from 106 countries that were genotyped using the Infinium iSelect 90K SNP wheat bead chip array. The MCG method was used to select accessions for exome sequencing. This method uses a genetic relationship matrix calculated from genotype data to iteratively chose and arbitrary number of accessions (in the case of this study 20% of the accessions) that collectively explain the largest proportion of variance in genetic relationships among the whole set. Genomic DNA was extracted from leaf tissue for each accession using the Agencourt DNAdvance Genomic DNA Isolation Kit (Beckman Coulter) and subjected to sequence capture using the NimbleGen SeqCap EZ wheat whole genome assay. In brief, 1 µg of DNA was fragmented with the Covaris S2 instrument to obtain an average fragment length of 300 bp. Shorter fragments were removed using Agencourt AMPure XP beads (Beckman Coulter). The KAPA Library Preparation Kit (Kapa Biosystems) and adapters supplied in the NimbleGen SeqCap EZ Reagent Kit Plus v2 (Roche) were used to prepare sample libraries for the capture assay, according to the KAPA protocol but excluding steps 8.1-8.22. The quality and yield of each sample library was assessed using an Agilent 2200 TapeStation (Agilent Technologies) before proceeding to the sequence capture assay following the Roche protocol. Each target capture sequence enriched sample library was sequenced on an Illumina HiSeq2000 instrument (Illumina) to generate about 30 million reads per accession. The project leaders are Matthew Hayden (Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, Victoria, Australia; La Trobe University, Bundoora, Victoria, Australia) and Eduard Akhunov (Kansas State University, USA). More information can be found on our project website at http://wheatgenomics.plantpath.ksu.edu/1000EC

text: leaf

text: Aus30278 = GAE.SQUARROSA (268)


text: Macedonia, Greece by

text: bread wheat

characteristic: common name

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-003599 - Accession Name = 'G-54326'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Libero/3/Kenya/Sinai I//Mentana'

text: 2 week old

text: spring wheat

text: Greece

text: PI 225158

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 225158

text: subsp. aestivum

characteristic: sub species

characteristic: submission description

text: leaf


text: bread wheat

characteristic: cultivar

text: AVS

text: exome sequences of ExomeCapture-DAS5-000685 - Accession Name = 'Aus29674/2*Annuello*5'; Remarks = 'BC2F6 selection'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Aus29674/2*Annuello'

text: 2 week old

text: spring wheat

text: Australia

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf

text: Aus29674 = ROK/KML//AE.SQUARROSA (507)

characteristic: variety


text: bread wheat

text: UKRAINE W94508

text: AWCC

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-003163 - Accession Name = 'UKRAINE W94508'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: Russia

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission identifier

text: leaf


text: bread wheat

text: NEUZUCHT

text: AWCC

text: exome sequences of ExomeCapture-DAS5-002781 - Accession Name = 'NEUZUCHT'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

characteristic: description

text: 2 week old

text: Romania

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: Exome sequencing of diverse collection of wheat landraces, cultivars and breeding lines

characteristic: submission title

text: leaf


text: bread wheat

text: POLAND 18

text: AWCC

text: exome sequences of ExomeCapture-DAS5-002868 - Accession Name = 'POLAND 18'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

characteristic: dev stage

text: Poland

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


unit: year

characteristic: animal age at collection

text: mammary gland from an adult female texel x blackface sheep, OAR_RI_AF2

text: adult

characteristic: developmental stage

text: fed

characteristic: fasted status

text: normal

characteristic: health status at collection

text: specimen from organism

text: Ovis aries

text: mammary gland

characteristic: organism part

text: FAANG

characteristic: project

unit: YYYY-MM-DD

characteristic: specimen collection date

characteristic: specimen collection protocol

text: The Roslin Institute Sheep Gene Expression Atlas Project

text: Roslin Sheep Atlas

type: derived from

BBSRC

Role: funder

Address: Polaris House, North Star Avenue, Swindon, Wiltshire, SN2 1UH

EMBL-EBI

Role: curator

Address: Wellcome Genome Campus, Hinxton, Cambridge, CB10 1SD, United Kingdom

Name: The Roslin Institute and Royal Dick School of Veterinary Studies

Role: biomaterial provider

Address: Easter Bush Campus, Edinburgh, Midlothian, EH25 9RG

Role: institution

Alan Archibald

FirstName: Alan

LastName: Archibald

MidInitials: L

Role: Investigator

Bruce Whitelaw

FirstName: Bruce

LastName: Whitelaw

MidInitials: C

David Hume

FirstName: David

LastName: Hume

MidInitials: A

Emily Clark

FirstName: Emily

LastName: Clark

Role: experiment performer

Role: submitter

Kim Summers

FirstName: Kim

LastName: Summers

MidInitials: M

Mary McCulloch

FirstName: Mary

LastName: McCulloch

MidInitials: B

Mick Watson

FirstName: Mick

LastName: Watson

Stephen Bush

FirstName: Stephen

LastName: Bush

MidInitials: J

Role: data analyst


characteristic: SRA accession

text: bread wheat

characteristic: common name

text: CDC RAMA

text: AWCC

text: exome sequences of ExomeCapture-DAS5-002218 - Accession Name = 'CDC RAMA'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: material

text: Triticum aestivum subsp. aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

characteristic: specimen voucher

text: subsp. aestivum

characteristic: sub species

text: leaf

characteristic: tissue type


text: 1988 Yemen by Guarino, L., International Plant Genetic Resources Institute

characteristic: collected by

text: bread wheat

characteristic: cultivar

text: USDA GRIN

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-004254 - Accession Name = '1169'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '15.5,47.5,.'; Ancestry = '.'

characteristic: description

text: 2 week old

characteristic: dev stage

text: spring wheat

characteristic: ecotype

text: Yemen

text: PDR South Yemen

characteristic: geographic location (region and locality)

characteristic: lat lon

text: PI 574372

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 574372

text: subsp. aestivum

characteristic: submission description

characteristic: submission identifier

characteristic: submission title

text: leaf

text: :1169;:NSGC 1401

characteristic: variety


characteristic: SRA accession

text: bread wheat

characteristic: common name

text: BRAZIL 1

text: AWCC

text: exome sequences of ExomeCapture-WATKINS-007179 - Accession Name = 'BRAZIL 1'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: material

text: Triticum aestivum subsp. aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


text: bread wheat

text: AVS

text: exome sequences of ExomeCapture-DAS5-000985 - Accession Name = 'Aus29662/2*Annuello*5'; Remarks = 'BC2F6 selection'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Aus29662/2*Annuello'

text: 2 week old

text: spring wheat

text: Australia

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

characteristic: specimen voucher

text: subsp. aestivum

characteristic: sub species

text: leaf

characteristic: tissue type

text: Aus29662 = 68.111/RGB-U//WARD/3/FGO/4/RABI/5/AE.SQUARROSA (878)


text: 03/09/1902 Iraq by Fairchild, D., USDA - Bureau of Plant Industry; Lathrop, B., USDA - Bureau of Plant Industry

characteristic: collected by

text: bread wheat

text: Kurd

characteristic: cultivar

text: exome sequences of ExomeCapture-WSC-7-8 - Accession Name = 'Kurd'; Remarks = 'Grown in Kurdistan and brought down to the Baghdad market. (Fairchild, 1902)'; Released = '.'; Lattitude,Longitude,Elevation = '33,44,.'; Ancestry = '.'

characteristic: description

text: 2 week old

characteristic: dev stage

text: spring wheat

text: Iraq

text: apparently grown in Kurdistan

text: PI 8813

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: PI 8813

text: subsp. aestivum

text: leaf

text: :Kurd;:877;:CI 2126;:CItr 2126


text: bread wheat

text: UKRAINKA

text: AWCC

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-003164 - Accession Name = 'UKRAINKA'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: Russia

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: The exome sequenced hexaploid wheat accessions were selected from a worldwide population of landraces and cultivars obtained from the USDA National Small Grains Collection and the Australian Grains Genebank (formally the Australian Winter Cereal Collection). The worldwide population comprised 3990 accessions from 106 countries that were genotyped using the Infinium iSelect 90K SNP wheat bead chip array. The MCG method was used to select accessions for exome sequencing. This method uses a genetic relationship matrix calculated from genotype data to iteratively chose and arbitrary number of accessions (in the case of this study 20% of the accessions) that collectively explain the largest proportion of variance in genetic relationships among the whole set. Genomic DNA was extracted from leaf tissue for each accession using the Agencourt DNAdvance Genomic DNA Isolation Kit (Beckman Coulter) and subjected to sequence capture using the NimbleGen SeqCap EZ wheat whole genome assay. In brief, 1 µg of DNA was fragmented with the Covaris S2 instrument to obtain an average fragment length of 300 bp. Shorter fragments were removed using Agencourt AMPure XP beads (Beckman Coulter). The KAPA Library Preparation Kit (Kapa Biosystems) and adapters supplied in the NimbleGen SeqCap EZ Reagent Kit Plus v2 (Roche) were used to prepare sample libraries for the capture assay, according to the KAPA protocol but excluding steps 8.1-8.22. The quality and yield of each sample library was assessed using an Agilent 2200 TapeStation (Agilent Technologies) before proceeding to the sequence capture assay following the Roche protocol. Each target capture sequence enriched sample library was sequenced on an Illumina HiSeq2000 instrument (Illumina) to generate about 30 million reads per accession. The project leaders are Matthew Hayden (Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, Victoria, Australia; La Trobe University, Bundoora, Victoria, Australia) and Eduard Akhunov (Kansas State University, USA). More information can be found on our project website at http://wheatgenomics.plantpath.ksu.edu/1000EC

characteristic: submission description

text: leaf


text: 1948 Nord, France by Andre Blondeau Seeds. DONATED 01/11/1962 by Dept. of Scientific & Industrial Res.

text: bread wheat

text: Miana

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-004494 - Accession Name = 'Miana'; Remarks = '.'; Released = '1948'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Institut Agronomique/Hybride de Bersee'

text: 2 week old

text: F

characteristic: ecotype

text: France

text: PI 278190

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 278190

text: subsp. aestivum

characteristic: submission identifier

characteristic: submission title

text: leaf

text: :Miana


characteristic: SRA accession

text: bread wheat

characteristic: common name

text: INDIA 316

text: AWCC

text: exome sequences of ExomeCapture-WATKINS-007395 - Accession Name = 'INDIA 316'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: India

text: DALBANDIN;DALBANDIN

characteristic: geographic location (region and locality)

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf

characteristic: variety


text: bread wheat

text: RUMANIA 10

text: AWCC

text: exome sequences of ExomeCapture-WATKINS-007510 - Accession Name = 'RUMANIA 10'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Romania

characteristic: geographic location (country and/or sea)

characteristic: material

text: Triticum aestivum subsp. aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: subsp. aestivum

text: Exome sequencing of diverse collection of wheat landraces, cultivars and breeding lines

text: leaf


text: bread wheat

text: exome sequences of ExomeCapture-WSC-1-9 - Accession Name = 'PBW434'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: India

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: sub species

text: leaf

characteristic: tissue type


text: Santa Fe, Argentina by Vigliano, I.. DONATED 03/02/1954 by Vallega, J., Estacion Experimental Central

characteristic: collected by

text: bread wheat

text: D.I.V. 6723

characteristic: cultivar

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-003299 - Accession Name = 'D.I.V. 6723'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

characteristic: description

text: 2 week old

text: spring wheat

text: Argentina

text: PI 213602

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 213602

characteristic: specimen voucher

text: subsp. aestivum

text: leaf

text: :D.I.V. 6723;:2972 H1208 50 261


text: bread wheat

text: TIMIRIASEV 2453

text: AWCC

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-003116 - Accession Name = 'TIMIRIASEV 2453'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

characteristic: dev stage

text: Russia

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission description

text: leaf


characteristic: SRA accession

text: bread wheat

text: AFGHANISTAN 23

text: AWCC

text: exome sequences of ExomeCapture-WATKINS-007108 - Accession Name = 'AFGHANISTAN 23'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

characteristic: ecotype

text: Afghanistan

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission identifier

characteristic: submission title

text: leaf


text: bread wheat

characteristic: common name

text: AUSTRALIA CCI W270

text: AWCC

text: exome sequences of ExomeCapture-WATKINS-007155 - Accession Name = 'AUSTRALIA CCI W270'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Australia

characteristic: geographic location (country and/or sea)

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf

characteristic: variety


text: Santa Fe, Argentina by Vigliano, I.

text: bread wheat

text: Sel. 49-2852 H1073

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-004660 - Accession Name = 'Sel. 49-2852 H1073'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: F

text: Argentina

text: PI 189830

characteristic: material

text: Triticum aestivum subsp. aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: USDA GRIN:PI 189830

text: subsp. aestivum

text: leaf

text: :Sel. 49-2852 H1073


text: bread wheat

text: AUSSIE

text: AWCC

text: exome sequences of ExomeCapture-DAS5-002071 - Accession Name = 'AUSSIE'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Australia

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: sub species

text: leaf

characteristic: tissue type


text: bread wheat

text: TOKAI 66

characteristic: cultivar

text: AWCC

text: exome sequences of ExomeCapture-DAS5-003119 - Accession Name = 'TOKAI 66'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

characteristic: description

text: 2 week old

text: spring wheat

text: Japan

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


text: 01/23/1983 Santa Cruz, Bolivia by Crespo, M., Centro de Investigaciones. DONATED 10/08/1991 by Gonzalo, A., Banco de Germoplasma

characteristic: collected by

text: bread wheat

text: Florentino

text: exome sequences of ExomeCapture-WSC-7-9 - Accession Name = 'Florentino'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '-17.91666667,-64.2,2550'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Bolivia

text: Santa Cruz;Torrecillas, Cabaliero

characteristic: geographic location (region and locality)

characteristic: lat lon

text: PI 565213

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: PI 565213

characteristic: specimen voucher

text: subsp. aestivum

text: leaf


characteristic: SRA accession

text: bread wheat

text: DALNEVOSTOCNAJA

text: AWCC

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-002266 - Accession Name = 'DALNEVOSTOCNAJA'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

characteristic: dev stage

text: Russia

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: The exome sequenced hexaploid wheat accessions were selected from a worldwide population of landraces and cultivars obtained from the USDA National Small Grains Collection and the Australian Grains Genebank (formally the Australian Winter Cereal Collection). The worldwide population comprised 3990 accessions from 106 countries that were genotyped using the Infinium iSelect 90K SNP wheat bead chip array. The MCG method was used to select accessions for exome sequencing. This method uses a genetic relationship matrix calculated from genotype data to iteratively chose and arbitrary number of accessions (in the case of this study 20% of the accessions) that collectively explain the largest proportion of variance in genetic relationships among the whole set. Genomic DNA was extracted from leaf tissue for each accession using the Agencourt DNAdvance Genomic DNA Isolation Kit (Beckman Coulter) and subjected to sequence capture using the NimbleGen SeqCap EZ wheat whole genome assay. In brief, 1 µg of DNA was fragmented with the Covaris S2 instrument to obtain an average fragment length of 300 bp. Shorter fragments were removed using Agencourt AMPure XP beads (Beckman Coulter). The KAPA Library Preparation Kit (Kapa Biosystems) and adapters supplied in the NimbleGen SeqCap EZ Reagent Kit Plus v2 (Roche) were used to prepare sample libraries for the capture assay, according to the KAPA protocol but excluding steps 8.1-8.22. The quality and yield of each sample library was assessed using an Agilent 2200 TapeStation (Agilent Technologies) before proceeding to the sequence capture assay following the Roche protocol. Each target capture sequence enriched sample library was sequenced on an Illumina HiSeq2000 instrument (Illumina) to generate about 30 million reads per accession. The project leaders are Matthew Hayden (Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, Victoria, Australia; La Trobe University, Bundoora, Victoria, Australia) and Eduard Akhunov (Kansas State University, USA). More information can be found on our project website at http://wheatgenomics.plantpath.ksu.edu/1000EC

characteristic: submission description

text: leaf


text: bread wheat

characteristic: common name

text: NAVARRE 71

text: AWCC

text: exome sequences of ExomeCapture-WATKINS-007455 - Accession Name = 'NAVARRE 71'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

characteristic: ecotype

text: Spain

characteristic: geographic location (country and/or sea)

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission identifier

characteristic: submission title

text: leaf


text: bread wheat

text: D.I.V. 6714

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-003296 - Accession Name = 'D.I.V. 6714'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Argentina

text: PI 213593

characteristic: material

text: Triticum aestivum subsp. aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: USDA GRIN:PI 213593

text: subsp. aestivum

characteristic: sub species

text: leaf

text: :D.I.V. 6714;:2937 H912 43 1947

characteristic: variety


text: bread wheat

text: POLAND 11

characteristic: cultivar

text: AWCC

text: exome sequences of ExomeCapture-DAS5-002863 - Accession Name = 'POLAND 11'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

characteristic: description

text: 2 week old

text: Poland

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf

characteristic: tissue type


characteristic: SRA accession

text: bread wheat

text: BUCK METEORO

text: AWCC

text: exome sequences of ExomeCapture-DAS5-002180 - Accession Name = 'BUCK METEORO'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: Argentina

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

characteristic: specimen voucher

text: subsp. aestivum

text: Exome sequencing of diverse collection of wheat landraces, cultivars and breeding lines

text: leaf


text: Peru by

characteristic: collected by

text: bread wheat

text: USDA GRIN

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-003907 - Accession Name = '3-18-57'; Remarks = 'Entry in the 1963 ISWRN.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Lee/Frontana'

text: 2 week old

characteristic: dev stage

text: spring wheat

text: Peru

text: CItr 14400

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:CItr 14400

text: subsp. aestivum

text: leaf

text: :3-18-57;:CI 14400


text: 12/15/1964 Akele Guzai, Eritrea by Smith, E., USDA, ARS

text: bread wheat

characteristic: common name

text: ELS 6404-125

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-001365 - Accession Name = 'ELS 6404-125'; Remarks = 'Purple seed.'; Released = '.'; Lattitude,Longitude,Elevation = '15.06666667,39.05,2263'; Ancestry = '.'

text: 2 week old

text: spring wheat

characteristic: ecotype

text: Eritrea

text: Akele Guzai;Decamare, south of Asmara

characteristic: geographic location (region and locality)

characteristic: lat lon

text: CItr 14811

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:CItr 14811

text: subsp. aestivum

characteristic: submission description

text: leaf

text: :ELS 6404-125;:ICARDA-IG-83827;:CI 14811


text: bread wheat

text: IRAQ 42

text: AWCC

text: exome sequences of ExomeCapture-WATKINS-007641 - Accession Name = 'IRAQ 42'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Iraq

characteristic: geographic location (country and/or sea)

text: Baqubah;Baqubah

characteristic: material

text: Triticum aestivum subsp. aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission identifier

characteristic: submission title

text: leaf


text: pasta wheat

text: KARKOVSKAJA 46

characteristic: cultivar

text: AWCC

text: exome sequences of ExomeCapture-DAS5-002519 - Accession Name = 'KARKOVSKAJA 46'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

characteristic: description

text: 2 week old

text: Russia

text: Triticum turgidum subsp. durum

text: Triticum turgidum subsp. durum

characteristic: scientific name

text: subsp. durum

characteristic: sub species

text: leaf

characteristic: variety


characteristic: SRA accession

text: Unknown by

characteristic: collected by

text: bread wheat

text: CI 14087

text: USDA GRIN

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-004200 - Accession Name = 'CI 14087'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: not provided

text: CItr 14087

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:CItr 14087

characteristic: specimen voucher

text: subsp. aestivum

text: leaf

characteristic: tissue type

text: :CI 14087


text: Rio Grande do Sul, Brazil by. DONATED 1947 by Levine, M., Minnesota Agric. Exp. Station

text: bread wheat

characteristic: common name

text: Esteana

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-003410 - Accession Name = 'Esteana'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'La Estanzuela 2787C/Floreana/Sinvalocho'

text: 2 week old

characteristic: dev stage

text: spring wheat

characteristic: ecotype

text: Brazil

text: CItr 12811

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:CItr 12811

text: subsp. aestivum

text: leaf

text: :Esteana;:CI 12811


text: bread wheat

text: PODOLJANSKAJA

text: AWCC

text: exome sequences of ExomeCapture-DAS5-002860 - Accession Name = 'PODOLJANSKAJA'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: Russia

characteristic: geographic location (country and/or sea)

characteristic: material

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission description

text: leaf


text: pasta wheat

text: KARA KILCIK

text: AWCC

text: exome sequences of ExomeCapture-DAS5-002515 - Accession Name = 'KARA KILCIK'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: Russia

text: Triticum turgidum subsp. durum

characteristic: organism

text: Triticum turgidum subsp. durum

text: subsp. durum

characteristic: submission identifier

characteristic: submission title

text: leaf


text: pasta wheat

text: HAURANI 27

characteristic: cultivar

text: AWCC

text: exome sequences of ExomeCapture-DAS5-002454 - Accession Name = 'HAURANI 27'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

characteristic: description

text: 2 week old

text: Lebanon

text: Triticum turgidum subsp. durum

text: Triticum turgidum subsp. durum

characteristic: scientific name

text: subsp. durum

text: The exome sequenced hexaploid wheat accessions were selected from a worldwide population of landraces and cultivars obtained from the USDA National Small Grains Collection and the Australian Grains Genebank (formally the Australian Winter Cereal Collection). The worldwide population comprised 3990 accessions from 106 countries that were genotyped using the Infinium iSelect 90K SNP wheat bead chip array. The MCG method was used to select accessions for exome sequencing. This method uses a genetic relationship matrix calculated from genotype data to iteratively chose and arbitrary number of accessions (in the case of this study 20% of the accessions) that collectively explain the largest proportion of variance in genetic relationships among the whole set. Genomic DNA was extracted from leaf tissue for each accession using the Agencourt DNAdvance Genomic DNA Isolation Kit (Beckman Coulter) and subjected to sequence capture using the NimbleGen SeqCap EZ wheat whole genome assay. In brief, 1 µg of DNA was fragmented with the Covaris S2 instrument to obtain an average fragment length of 300 bp. Shorter fragments were removed using Agencourt AMPure XP beads (Beckman Coulter). The KAPA Library Preparation Kit (Kapa Biosystems) and adapters supplied in the NimbleGen SeqCap EZ Reagent Kit Plus v2 (Roche) were used to prepare sample libraries for the capture assay, according to the KAPA protocol but excluding steps 8.1-8.22. The quality and yield of each sample library was assessed using an Agilent 2200 TapeStation (Agilent Technologies) before proceeding to the sequence capture assay following the Roche protocol. Each target capture sequence enriched sample library was sequenced on an Illumina HiSeq2000 instrument (Illumina) to generate about 30 million reads per accession. The project leaders are Matthew Hayden (Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, Victoria, Australia; La Trobe University, Bundoora, Victoria, Australia) and Eduard Akhunov (Kansas State University, USA). More information can be found on our project website at http://wheatgenomics.plantpath.ksu.edu/1000EC

text: leaf


characteristic: SRA accession

text: Oruro, Bolivia by Wight, W., USDA - Bureau of Plant Industry

text: bread wheat

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-001094 - Accession Name = '396'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '-18.66666667,-67.5,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Bolivia

characteristic: lat lon

text: PI 36390

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 36390

text: subsp. aestivum

characteristic: sub species

text: leaf

text: :396;:ICARDA-IG-87350;:ICARDA-IG-83239;:ICARDA-IG-98065;:CI 4084;:AUS 11705;:CItr 4084

characteristic: variety


text: bread wheat

text: KLEIN COMPACTA

text: AWCC

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-002563 - Accession Name = 'KLEIN COMPACTA'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: Argentina

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

characteristic: specimen voucher

text: subsp. aestivum

text: Exome sequencing of diverse collection of wheat landraces, cultivars and breeding lines

text: leaf

characteristic: tissue type


text: pasta wheat

characteristic: common name

text: CAPPELLI

text: AWCC

text: exome sequences of ExomeCapture-DAS5-002212 - Accession Name = 'CAPPELLI'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

characteristic: dev stage

text: Italy

text: Triticum turgidum subsp. durum

text: Triticum turgidum subsp. durum

text: subsp. durum

text: leaf


text: Morocco by Inst. Nat. de la Recherche Agronomique. DONATED 09/28/1950 by Estacao de Melhoramento de Plantas

characteristic: collected by

text: bread wheat

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-003844 - Accession Name = '2021A'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Triticum aestivum/Aegilops ovata 29'

text: 2 week old

text: spring wheat

characteristic: ecotype

text: Morocco

characteristic: geographic location (country and/or sea)

text: PI 192480

characteristic: material

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 192480

text: subsp. aestivum

text: leaf


text: 1963 Zimbabwe by Crop Breeding Institute

text: bread wheat

text: Hunyani

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-001471 - Accession Name = 'Hunyani'; Remarks = '.'; Released = '1963'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Kafue/S29A1'

text: 2 week old

text: spring wheat

text: Zimbabwe

text: PI 314914

text: Triticum aestivum subsp. aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 314914

text: subsp. aestivum

characteristic: submission description

characteristic: submission identifier

characteristic: submission title

text: leaf

text: :Hunyani


characteristic: SRA accession

text: Armenia by Vavilov, N., N.I. Vavilov Institute of Plant Industry. DONATED 11/20/1930 by Dickson, J., USDA-Bureau of Plant Industry

text: emmer wheat

characteristic: cultivar

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-003301 - Accession Name = '298'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

characteristic: description

text: 2 week old

text: spring wheat

text: Armenia

text: PI 94673

text: Triticum turgidum subsp. dicoccon

text: Triticum turgidum subsp. dicoccon

characteristic: scientific name

text: USDA GRIN:PI 94673

text: subsp. dicoccon

text: leaf


text: bread wheat

text: Ellison

text: AWCC

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-ELLISON - Accession Name = 'Ellison'; Remarks = 'Hard / White'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Australia

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: sub species

text: leaf

characteristic: variety


text: bread wheat

characteristic: common name

text: AVS

text: exome sequences of ExomeCapture-DAS5-000030 - Accession Name = 'Aus29654/yitpi*9'; Remarks = 'BC1F4 selection'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Aus29654/yitpi'

text: 2 week old

text: spring wheat

text: Australia

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

characteristic: specimen voucher

text: subsp. aestivum

text: leaf

characteristic: tissue type

text: Aus29654 = 68.111/RGB-U//WARD RESEL/3/STIL/4/AE.SQUARROSA (783)


text: bread wheat

text: INDIA 335

text: AWCC

text: exome sequences of ExomeCapture-WATKINS-007401 - Accession Name = 'INDIA 335'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

characteristic: dev stage

text: spring wheat

characteristic: ecotype

text: India

text: Upper Zhob;Killa Saifulla, Sadar, Upper Zhob

characteristic: geographic location (region and locality)

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


text: bread wheat

text: MALAKOF ?

text: AWCC

text: exome sequences of ExomeCapture-DAS5-002708 - Accession Name = 'MALAKOF ?'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: Russia

characteristic: geographic location (country and/or sea)

characteristic: material

text: Triticum aestivum subsp. aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: The exome sequenced hexaploid wheat accessions were selected from a worldwide population of landraces and cultivars obtained from the USDA National Small Grains Collection and the Australian Grains Genebank (formally the Australian Winter Cereal Collection). The worldwide population comprised 3990 accessions from 106 countries that were genotyped using the Infinium iSelect 90K SNP wheat bead chip array. The MCG method was used to select accessions for exome sequencing. This method uses a genetic relationship matrix calculated from genotype data to iteratively chose and arbitrary number of accessions (in the case of this study 20% of the accessions) that collectively explain the largest proportion of variance in genetic relationships among the whole set. Genomic DNA was extracted from leaf tissue for each accession using the Agencourt DNAdvance Genomic DNA Isolation Kit (Beckman Coulter) and subjected to sequence capture using the NimbleGen SeqCap EZ wheat whole genome assay. In brief, 1 µg of DNA was fragmented with the Covaris S2 instrument to obtain an average fragment length of 300 bp. Shorter fragments were removed using Agencourt AMPure XP beads (Beckman Coulter). The KAPA Library Preparation Kit (Kapa Biosystems) and adapters supplied in the NimbleGen SeqCap EZ Reagent Kit Plus v2 (Roche) were used to prepare sample libraries for the capture assay, according to the KAPA protocol but excluding steps 8.1-8.22. The quality and yield of each sample library was assessed using an Agilent 2200 TapeStation (Agilent Technologies) before proceeding to the sequence capture assay following the Roche protocol. Each target capture sequence enriched sample library was sequenced on an Illumina HiSeq2000 instrument (Illumina) to generate about 30 million reads per accession. The project leaders are Matthew Hayden (Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, Victoria, Australia; La Trobe University, Bundoora, Victoria, Australia) and Eduard Akhunov (Kansas State University, USA). More information can be found on our project website at http://wheatgenomics.plantpath.ksu.edu/1000EC

text: leaf


text: bread wheat

text: DIOSEQ 1

text: AWCC

text: exome sequences of ExomeCapture-WATKINS-007096 - Accession Name = 'DIOSEQ 1'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: not provided

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission description

characteristic: submission identifier

characteristic: submission title

text: leaf


characteristic: SRA accession

text: bread wheat

characteristic: cultivar

text: AVS

text: exome sequences of ExomeCapture-DAS5-000142 - Accession Name = 'Aus30278/annuello*19'; Remarks = 'BC1F4 selection'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Aus30278/annuello'

characteristic: description

text: 2 week old

text: spring wheat

text: Australia

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf

text: Aus30278 = GAE.SQUARROSA (268)


text: 08/14/1987 Georgia by Hanelt, P., Institut fur Pflanzengenetik; Kruse, J., Botanical Institute

characteristic: collected by

text: bread wheat

text: AW 7200/90

text: exome sequences of ExomeCapture-PI-572692 - Accession Name = 'AW 7200/90'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '42.65833333,45.16,1400'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Georgia

text: Satili, about 80 km northeast of Duseti, Rayon Duseti, historical province Chevsuretien; contaminant in barley field (SN-2174)

characteristic: lat lon

text: PI 572692

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: PI 572692

text: subsp. aestivum

characteristic: sub species

text: Exome sequencing of diverse collection of wheat landraces, cultivars and breeding lines

text: leaf

text: :AW 7200/90;:SN-2175;:NSGC 450


text: Denmark by Andersen, K., Royal Agricultural School

text: bread wheat

characteristic: common name

text: Bayonete

text: USDA GRIN

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-004333 - Accession Name = 'Bayonete'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: winter wheat

text: Denmark

text: PI 361721

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 361721

characteristic: specimen voucher

text: subsp. aestivum

text: leaf

characteristic: tissue type

characteristic: variety


text: bread wheat

text: AWCC

text: exome sequences of ExomeCapture-WATKINS-007623 - Accession Name = 'Aus28092'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

characteristic: dev stage

text: spring wheat

characteristic: ecotype

text: Australia

characteristic: geographic location (country and/or sea)

characteristic: material

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


text: pasta wheat

text: AWCC

text: exome sequences of ExomeCapture-WATKINS-007288 - Accession Name = 'Aus27470'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: Russia

text: Triticum turgidum subsp. durum

characteristic: organism

text: Triticum turgidum subsp. durum

text: subsp. durum

characteristic: submission description

characteristic: submission identifier

characteristic: submission title

text: leaf


characteristic: SRA accession

text: pasta wheat

text: HEDBA 3

characteristic: cultivar

text: AWCC

text: exome sequences of ExomeCapture-DAS5-002458 - Accession Name = 'HEDBA 3'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

characteristic: description

text: 2 week old

text: Algeria

text: Triticum turgidum subsp. durum

text: Triticum turgidum subsp. durum

text: subsp. durum

text: leaf


text: 12/15/1964 Eritrea by Smith, E., USDA, ARS

characteristic: collected by

text: bread wheat

text: ELS 6404-128-1

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-001368 - Accession Name = 'ELS 6404-128-1'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '15,39,2141'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Eritrea

text: Ukero, south of Asmara

characteristic: geographic location (region and locality)

characteristic: lat lon

text: CItr 14817

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: USDA GRIN:CItr 14817

text: subsp. aestivum

characteristic: sub species

text: leaf

text: :ELS 6404-128-1;:CI 14817


text: Rift Valley, Kenya by Plant Breeding Station

text: bread wheat

characteristic: common name

text: Rhodesian Sabanero

text: USDA GRIN

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-001809 - Accession Name = 'Rhodesian Sabanero'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '1,38,.'; Ancestry = 'selection from Sabanero '

text: 2 week old

text: spring wheat

text: Kenya

text: PI 230202

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 230202

characteristic: specimen voucher

text: subsp. aestivum

text: leaf

characteristic: tissue type

text: :Rhodesian Sabanero

characteristic: variety


text: pasta wheat

text: GIGANTE INGLES

text: AWCC

text: exome sequences of ExomeCapture-DAS5-002406 - Accession Name = 'GIGANTE INGLES'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

characteristic: dev stage

text: Portugal

characteristic: geographic location (country and/or sea)

characteristic: material

text: Triticum turgidum subsp. durum

characteristic: organism

text: Triticum turgidum subsp. durum

text: subsp. durum

text: leaf


characteristic: SRA accession

text: bread wheat

text: POHJOLA

text: AWCC

text: exome sequences of ExomeCapture-DAS5-002861 - Accession Name = 'POHJOLA'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: Finland

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: The exome sequenced hexaploid wheat accessions were selected from a worldwide population of landraces and cultivars obtained from the USDA National Small Grains Collection and the Australian Grains Genebank (formally the Australian Winter Cereal Collection). The worldwide population comprised 3990 accessions from 106 countries that were genotyped using the Infinium iSelect 90K SNP wheat bead chip array. The MCG method was used to select accessions for exome sequencing. This method uses a genetic relationship matrix calculated from genotype data to iteratively chose and arbitrary number of accessions (in the case of this study 20% of the accessions) that collectively explain the largest proportion of variance in genetic relationships among the whole set. Genomic DNA was extracted from leaf tissue for each accession using the Agencourt DNAdvance Genomic DNA Isolation Kit (Beckman Coulter) and subjected to sequence capture using the NimbleGen SeqCap EZ wheat whole genome assay. In brief, 1 µg of DNA was fragmented with the Covaris S2 instrument to obtain an average fragment length of 300 bp. Shorter fragments were removed using Agencourt AMPure XP beads (Beckman Coulter). The KAPA Library Preparation Kit (Kapa Biosystems) and adapters supplied in the NimbleGen SeqCap EZ Reagent Kit Plus v2 (Roche) were used to prepare sample libraries for the capture assay, according to the KAPA protocol but excluding steps 8.1-8.22. The quality and yield of each sample library was assessed using an Agilent 2200 TapeStation (Agilent Technologies) before proceeding to the sequence capture assay following the Roche protocol. Each target capture sequence enriched sample library was sequenced on an Illumina HiSeq2000 instrument (Illumina) to generate about 30 million reads per accession. The project leaders are Matthew Hayden (Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, Victoria, Australia; La Trobe University, Bundoora, Victoria, Australia) and Eduard Akhunov (Kansas State University, USA). More information can be found on our project website at http://wheatgenomics.plantpath.ksu.edu/1000EC

characteristic: submission description

characteristic: submission identifier

characteristic: submission title

text: leaf


text: bread wheat

characteristic: cultivar

text: AWCC

text: exome sequences of ExomeCapture-WATKINS-007070 - Accession Name = 'Aus27235'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

characteristic: description

text: 2 week old

text: F

characteristic: ecotype

text: Argentina

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


text: bread wheat

text: CHINA 35

text: AWCC

text: exome sequences of ExomeCapture-WATKINS-007218 - Accession Name = 'CHINA 35'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: China

text: Chongqing;CHONGQING (Chungking), Chongqing province

characteristic: geographic location (region and locality)

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: subsp. aestivum

characteristic: sub species

text: leaf


text: pasta wheat

characteristic: common name

text: RUSSIAN PERENNIAL

text: AWCC

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-002996 - Accession Name = 'RUSSIAN PERENNIAL'; Remarks = 'Hard / White'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: F

text: Russia

text: Triticum turgidum subsp. durum

text: Triticum turgidum subsp. durum

characteristic: specimen voucher

text: subsp. durum

text: leaf


text: bread wheat

text: KUKRI

text: AWCC

text: exome sequences of ExomeCapture-DAS5-002644 - Accession Name = 'KUKRI'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

characteristic: dev stage

text: spring wheat

text: Australia

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: Exome sequencing of diverse collection of wheat landraces, cultivars and breeding lines

text: leaf

characteristic: tissue type

characteristic: variety


text: bread wheat

text: AVS

text: exome sequences of ExomeCapture-DAS5-000824 - Accession Name = 'Aus29671/2*Annuello*4'; Remarks = 'BC2F6 selection'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Aus29671/2*Annuello'

text: 2 week old

text: spring wheat

text: Australia

characteristic: geographic location (country and/or sea)

characteristic: material

text: Triticum aestivum subsp. aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf

text: Aus29671 = GARZA/BOY//AE.SQUARROSA (165)


characteristic: SRA accession

text: bread wheat

text: LEON 9

text: AWCC

text: exome sequences of ExomeCapture-WATKINS-007430 - Accession Name = 'LEON 9'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Spain

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission description

characteristic: submission identifier

text: leaf


text: bread wheat

text: RUMANIA 14

characteristic: cultivar

text: AWCC

text: exome sequences of ExomeCapture-DAS5-002945 - Accession Name = 'RUMANIA 14'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

characteristic: description

text: 2 week old

text: Romania

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission title

text: leaf


text: 09/18/1965 Ghowr, Afghanistan by Gray, J., Reading University

characteristic: collected by

text: bread wheat

text: exome sequences of ExomeCapture-WSC-4-2 - Accession Name = '805'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '34.63333333,64.81666667,2652'; Ancestry = '.'

text: 2 week old

text: spring wheat

characteristic: ecotype

text: Afghanistan

text: Ghowr;14 km southeast of Dasht-i-Pam on Taiwara road

characteristic: geographic location (region and locality)

characteristic: lat lon

text: PI 366716

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: PI 366716

text: subsp. aestivum

text: leaf


text: bread wheat

characteristic: common name

text: RUSSIAN 9

text: AWCC

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-002992 - Accession Name = 'RUSSIAN 9'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

characteristic: dev stage

text: Russia

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

characteristic: specimen voucher

text: subsp. aestivum

characteristic: sub species

text: leaf


text: PRE 1930 Crete, Greece by Watkins, A., University of Cambridge. DONATED 01/11/1962 by Dept. of Scientific & Industrial Res.

text: bread wheat

text: Crete 11

text: exome sequences of ExomeCapture-WSC-7-3 - Accession Name = 'Crete 11'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '35.25,24.75,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Greece

characteristic: geographic location (country and/or sea)

text: PI 278297

characteristic: material

text: Triticum aestivum subsp. aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

text: PI 278297

text: subsp. aestivum

text: leaf

characteristic: tissue type

text: :Crete 11

characteristic: variety