text: common ragwort

characteristic: date received

text: Asteraceae

characteristic: family

text: individual

text: Asterales

characteristic: order

text: Jacobaea vulgaris

text: Lisa Outhwaite

characteristic: provider

text: The project's primary goal is to sequence 25 novel genomes representing UK biodiversity, as part of the Wellcome Sanger Institute's wider 25th Anniversary celebrations. This project will be a pathfinder for future long-read sequencing projects to demonstrate the Institute’s capabilities and will provide reference genomes for the global scientific community.

text: 25 Genomes Project


status: PUBLIC

characteristic: SRA accession

text: Carrington’s featherwort

characteristic: common name

unit: YYYY-MM-DD

text: Plagiochilaceae

text: individual

characteristic: material

text: Jungermanniales

text: Plagiochila carringtonii

characteristic: organism

text: Neil Bell

text: male

characteristic: sex

characteristic: submission description

characteristic: submission identifier

text: 25 Genomes Project

characteristic: submission title

type: has member

Wellcome Sanger Institute

Address: Wellcome Genome Campus, Hinxton, Cambridge, CB10 1SA, UK

Daniel Mead

FirstName: Daniel

LastName: Mead

Role: Project Coordinator


unit: year

characteristic: animal age at collection

text: kidney medulla from an adult male texel x blackface sheep, OAR_RI_AM2

characteristic: description

text: adult

characteristic: developmental stage

text: fed

characteristic: fasted status

text: normal

characteristic: health status at collection

text: specimen from organism

text: Ovis aries

text: renal medulla

characteristic: organism part

text: FAANG

characteristic: project

characteristic: specimen collection date

characteristic: specimen collection protocol

text: The Roslin Institute Sheep Gene Expression Atlas Project

text: Roslin Sheep Atlas

type: derived from

BBSRC

Role: funder

Address: Polaris House, North Star Avenue, Swindon, Wiltshire, SN2 1UH

EMBL-EBI

Role: curator

Address: Wellcome Genome Campus, Hinxton, Cambridge, CB10 1SD, United Kingdom

Name: The Roslin Institute and Royal Dick School of Veterinary Studies

Role: biomaterial provider

Address: Easter Bush Campus, Edinburgh, Midlothian, EH25 9RG

Role: institution

Alan Archibald

FirstName: Alan

LastName: Archibald

MidInitials: L

Role: Investigator

Bruce Whitelaw

FirstName: Bruce

LastName: Whitelaw

MidInitials: C

David Hume

FirstName: David

LastName: Hume

MidInitials: A

Emily Clark

FirstName: Emily

LastName: Clark

Role: experiment performer

Role: submitter

Kim Summers

FirstName: Kim

LastName: Summers

MidInitials: M

Mary McCulloch

FirstName: Mary

LastName: McCulloch

MidInitials: B

Mick Watson

FirstName: Mick

LastName: Watson

Stephen Bush

FirstName: Stephen

LastName: Bush

MidInitials: J

Role: data analyst


characteristic: SRA accession

text: caruncle from an adult female texel x blackface sheep, OAR_RI_AF2

text: adult

text: fed

text: normal

text: specimen from organism

text: Ovis aries

text: placental caruncle

text: FAANG

text: Roslin Sheep Atlas


PREDILETO

text: PREDILETO - Sire genotyped

text: Bos taurus

text: Bos taurus

characteristic: scientific name

text: The aim of this work was standardize an experimental model for GWAS based on DNA pooling from animals with high and low age at first calving at 14 month in Nellore cattle.

text: Standardization of Genome Wide Association Study (GWAS) based on DNA Pooling and allelotyping in High Density Arrays in Nellore

Address: Av. Duque de Caxias Norte, 225 - Campus da USP,13635-900 - Pirassununga, SP

Francisco Novais

FirstName: Francisco

LastName: Novais


FENOMENO

text: FENOMENO - Sire genotyped

text: Bos taurus

text: Bos taurus


HEBREU

text: HEBREU - Sire genotyped

text: Bos taurus

text: Bos taurus


MALVISTO

text: MALVISTO - Sire genotyped

text: Bos taurus

text: Bos taurus


THOR

text: THOR - Sire genotyped

text: Bos taurus

text: Bos taurus


ORGULHO

text: ORGULHO - Sire genotyped

text: Bos taurus

text: Bos taurus


SUBLIME

text: SUBLIME - Sire genotyped

text: Bos taurus

text: Bos taurus


NATIVO

text: NATIVO - Sire genotyped

text: Bos taurus

text: Bos taurus


SULTAO

text: SULTAO - Sire genotyped

text: Bos taurus

text: Bos taurus


MINEIRO

text: MINEIRO - Sire genotyped

text: Bos taurus

text: Bos taurus


ILTRON

text: ILTRON - Sire genotyped

text: Bos taurus

text: Bos taurus


POWER

text: POWER - Sire genotyped

text: Bos taurus

text: Bos taurus


PAR

text: PAR - Sire genotyped

text: Bos taurus

text: Bos taurus


NUCLEO

text: NUCLEO - Sire genotyped

text: Bos taurus

text: Bos taurus


QUARTZO

text: QUARTZO - Sire genotyped

text: Bos taurus

text: Bos taurus


QUILOWATT

text: QUILOWATT - Sire genotyped

text: Bos taurus

text: Bos taurus


HABILIDOSO

text: HABILIDOSO - Sire genotyped

text: Bos taurus

text: Bos taurus


QUILOMBO

text: QUILOMBO - Sire genotyped

text: Bos taurus

text: Bos taurus


TUDOR

text: TUDOR - Sire genotyped

text: Bos taurus

text: Bos taurus


ENREDO

text: ENREDO - Sire genotyped

text: Bos taurus

text: Bos taurus


OPCAO

text: OPCAO - Sire genotyped

text: Bos taurus

text: Bos taurus


KADIWEU

text: KADIWEU - Sire genotyped

text: Bos taurus

text: Bos taurus


RICO

text: RICO - Sire genotyped

text: Bos taurus

text: Bos taurus


KOREA

text: KOREA - Sire genotyped

text: Bos taurus

text: Bos taurus


REAL

text: REAL - Sire genotyped

text: Bos taurus

text: Bos taurus


LINIERS

text: LINIERS - Sire genotyped

text: Bos taurus

text: Bos taurus


INDEX

text: INDEX - Sire genotyped

text: Bos taurus

text: Bos taurus


TRUNFO

text: TRUNFO - Sire genotyped

text: Bos taurus

text: Bos taurus


LAVA

text: LAVA - Sire genotyped

text: Bos taurus

text: Bos taurus


HEBRAICO

text: HEBRAICO - Sire genotyped

text: Bos taurus

text: Bos taurus


MODERNO

text: MODERNO - Sire genotyped

text: Bos taurus

text: Bos taurus


MEDIEVAL

text: MEDIEVAL - Sire genotyped

text: Bos taurus

text: Bos taurus


ESPECIAL

text: ESPECIAL - Sire genotyped

text: Bos taurus

text: Bos taurus


JAMANTA

text: JAMANTA - Sire genotyped

text: Bos taurus

text: Bos taurus


ICEBERG

text: ICEBERG - Sire genotyped

text: Bos taurus

text: Bos taurus


QUEOPS

text: QUEOPS - Sire genotyped

text: Bos taurus

text: Bos taurus


LUAL

text: LUAL - Sire genotyped

text: Bos taurus

text: Bos taurus


ARAXA

text: ARAXA - Sire genotyped

text: Bos taurus

text: Bos taurus


LITU

text: LITU - Sire genotyped

text: Bos taurus

text: Bos taurus


KALITAS

text: KALITAS - Sire genotyped

text: Bos taurus

text: Bos taurus


text: ovary from an adult female texel x blackface sheep, OAR_RI_AF1

text: adult

text: fed

text: normal

text: specimen from organism

characteristic: material

text: Ovis aries

text: ovary

text: FAANG

text: Roslin Sheep Atlas


text: testes from an adult male texel x blackface sheep, OAR_RI_AM2

text: adult

text: fed

text: normal

text: specimen from organism

text: Ovis aries

characteristic: organism

text: testis

text: FAANG

text: Roslin Sheep Atlas


text: abomasum from an adult male texel x blackface sheep, OAR_RI_AM2

text: adult

text: fed

text: normal

text: specimen from organism

text: Ovis aries

text: abomasum

text: FAANG

text: Roslin Sheep Atlas


text: intercaruncular tissue from an adult female texel x blackface sheep, OAR_RI_AF3

text: adult

text: fed

text: normal

text: specimen from organism

text: Ovis aries

text: uterus

text: FAANG

text: Roslin Sheep Atlas


unit: day

text: duodenum from a male 8 week old texel x blackface lamb, OAR_RI_L9

text: juvenile days 45-89

text: fed

text: normal

text: specimen from organism

text: Ovis aries

text: duodenum

text: FAANG

text: Roslin Sheep Atlas


text: skeletal muscle longissimus dorsi from an adult male texel x blackface sheep, OAR_RI_AM2

text: adult

text: fed

text: normal

text: specimen from organism

text: Ovis aries

text: longissimus thoracis muscle

text: FAANG

text: Roslin Sheep Atlas


text: peyers patch from an adult male texel x blackface sheep, OAR_RI_AM3

text: adult

text: fed

text: normal

text: specimen from organism

text: Ovis aries

text: Peyer's patch

text: FAANG

text: Roslin Sheep Atlas


pooled DNA

text: Dongxiao Sun

characteristic: collected by

text: cattle

characteristic: common name

text: DNAmixture of 44 semens - The sample was the mixture of DNA extracted from 44 Chinese Holstein bulls semen

text: Bos taurus

text: Bos taurus

text: male

characteristic: sex

text: We designed and synthesized 23 pairs of primers in the entire exons, and 3 kb of 5′ and 3′ flanking regions of bovine LIPJ gene according to the genomic sequences of (GenBank accession number: NC_037353.1). 44 semen DNAs were pooled to use for the PCR amplifications with the equal concentration (50 ng/µL) for each DNA. All the PCR products were sequenced by ABI3730XL DNA analyzer (Applied Biosystems, Foster, CA, USA). Then, we aligned the sequences with the reference genome (UMD3.1.1) using the BLAST (https://blast.ncbi.nlm.nih.gov/Blast.cgi), and identified the novel SNP, g.10250120A/G.

text: the National Science and Technology Programs of China

Name: Key Laboratory of Animal Genetics and Breeding of Ministry of Agriculture

Address: No. 2 Yuanmingyuan West Road, Haidian District, Beijing 100193, China

Dongxiao Sun

FirstName: Dongxiao

LastName: Sun


text: ileum from a male one week old texel x blackface lamb, OAR_RI_L6

text: neonate

text: fed

text: normal

text: specimen from organism

text: Ovis aries

text: ileum

text: FAANG

characteristic: submission description

characteristic: submission identifier

text: Roslin Sheep Atlas

characteristic: submission title


characteristic: animal age at collection

text: ovary from a pregnant female texel x blackface sheep at 35 days gestation, OAR_RI_MF6

characteristic: description

text: adult

characteristic: developmental stage

text: fed

characteristic: gestational age at sample collection

text: normal

text: specimen from organism

text: Ovis aries

text: ovary

text: FAANG

text: Roslin Sheep Atlas


text: prescap lymph node from an adult female texel x blackface sheep, OAR_RI_AF1

text: adult

text: fed

characteristic: fasted status

text: normal

characteristic: health status at collection

text: specimen from organism

text: Ovis aries

text: prescapular lymph node

characteristic: organism part

text: FAANG

characteristic: project

text: Roslin Sheep Atlas


characteristic: SRA accession

text: rectum from an adult male texel x blackface sheep, OAR_RI_AM3

text: adult

text: fed

text: normal

text: specimen from organism

text: Ovis aries

text: rectum

text: FAANG

characteristic: specimen collection date

characteristic: specimen collection protocol

text: The Roslin Institute Sheep Gene Expression Atlas Project

text: Roslin Sheep Atlas


text: prescap lymph node from an adult male texel x blackface sheep, OAR_RI_AM3

text: adult

text: fed

text: normal

text: specimen from organism

characteristic: material

text: Ovis aries

characteristic: organism

text: prescapular lymph node

text: FAANG

text: Roslin Sheep Atlas


text: Cat

characteristic: common name

text: Felis catus

text: Felis catus

characteristic: scientific name

text: male

characteristic: sex

text: Whole-genome sequencing data of Munchkin cats were investigated.

text: Genetic investigations in Munchkin cats.

Name: Institute of Animal Breeding and Genetics:University of Veterinary Medicine, Foundation

Address: Buenteweg 17p, 30559 Hannover

Distl Ottmar

FirstName: Distl

LastName: Ottmar

Metzger Julia

FirstName: Metzger

LastName: Julia

Struck Ann-Kathrin

FirstName: Struck

LastName: Ann-Kathrin


text: Cat

text: Felis catus

text: Felis catus

text: female

characteristic: submission description

characteristic: submission identifier

characteristic: submission title


text: Horse

text: Unique Horse Sample31

characteristic: description

text: Equus caballus

text: Equus caballus

text: This study have as objectives: 1) from the sequencing of exomes of horses from the racing line of Quarter Horses, to perform the identification and functional classification of SNPs and InDels, depositing new variants in publicly databases of DNA polymorphisms; 2) to carry out a case-control association study between the identified variants and racing performance in contrasting horses for the characteristic.

text: Exome sequencing and association between identified variants and racing performance in Quarter Horses

IBITEC - Biotechnology Institute

Address: Biotechnology Institute, São Paulo State University (UNESP), 18607-440, Botucatu, São Paulo, Brazil.

Name: Laboratory of Genetics and Animal Improvement

Address: Department of Animal Breeding and Nutrition, College of Veterinary and Animal Science, São Paulo State University (UNESP), Rubião Junior District, 18618-970, Botucatu, São Paulo, Brazil.

Guilherme Pereira

FirstName: Guilherme

LastName: Pereira

Marcus Vinicius Alvarez

FirstName: Marcus Vinicius

LastName: Alvarez

Rogério Curi

FirstName: Rogério

LastName: Curi


text: Horse

text: Unique Horse Sample40

text: Equus caballus

text: Equus caballus


text: Horse

text: Unique Horse Sample20

text: Equus caballus

text: Equus caballus


text: Horse

text: Unique Horse Sample9

text: Equus caballus

text: Equus caballus


text: Horse

text: Unique Horse Sample6

text: Equus caballus

text: Equus caballus


text: Horse

text: Unique Horse Sample14

text: Equus caballus

text: Equus caballus


text: Horse

text: Unique Horse Sample17

text: Equus caballus

text: Equus caballus


text: Horse

text: Unique Horse Sample22

text: Equus caballus

text: Equus caballus


text: Horse

text: Unique Horse Sample5

text: Equus caballus

text: Equus caballus


text: Horse

text: Unique Horse Sample8

text: Equus caballus

text: Equus caballus


text: Horse

text: Unique Horse Sample24

text: Equus caballus

text: Equus caballus


text: Horse

text: Unique Horse Sample7

text: Equus caballus

text: Equus caballus


text: Horse

text: Unique Horse Sample3

text: Equus caballus

text: Equus caballus


text: Horse

text: Unique Horse Sample25

text: Equus caballus

text: Equus caballus


text: Horse

text: Unique Horse Sample15

text: Equus caballus

text: Equus caballus


text: Horse

text: Unique Horse Sample30

text: Equus caballus

text: Equus caballus


text: Horse

text: Unique Horse Sample11

text: Equus caballus

text: Equus caballus


text: Horse

text: Unique Horse Sample26

text: Equus caballus

text: Equus caballus


text: Horse

text: Unique Horse Sample39

text: Equus caballus

text: Equus caballus


text: Horse

text: Unique Horse Sample4

text: Equus caballus

text: Equus caballus


text: Horse

text: Unique Horse Sample1

text: Equus caballus

text: Equus caballus


text: Horse

text: Unique Horse Sample23

text: Equus caballus

text: Equus caballus


text: Horse

text: Unique Horse Sample12

text: Equus caballus

text: Equus caballus


text: Horse

text: Unique Horse Sample34

text: Equus caballus

text: Equus caballus


text: Horse

text: Unique Horse Sample10

text: Equus caballus

text: Equus caballus


text: Horse

text: Unique Horse Sample35

text: Equus caballus

text: Equus caballus


text: Horse

text: Unique Horse Sample37

text: Equus caballus

text: Equus caballus


text: Horse

text: Unique Horse Sample13

text: Equus caballus

text: Equus caballus


text: Horse

text: Unique Horse Sample2

text: Equus caballus

text: Equus caballus


text: Horse

text: Unique Horse Sample18

text: Equus caballus

text: Equus caballus


text: Horse

text: Unique Horse Sample33

text: Equus caballus

text: Equus caballus


text: Horse

text: Unique Horse Sample27

text: Equus caballus

text: Equus caballus


text: Horse

text: Unique Horse Sample28

text: Equus caballus

text: Equus caballus


text: Horse

text: Unique Horse Sample29

text: Equus caballus

text: Equus caballus


text: Horse

text: Unique Horse Sample16

text: Equus caballus

text: Equus caballus


text: Horse

text: Unique Horse Sample19

text: Equus caballus

text: Equus caballus


text: Horse

text: Unique Horse Sample21

text: Equus caballus

text: Equus caballus


text: Horse

text: Unique Horse Sample38

text: Equus caballus

text: Equus caballus


text: Horse

text: Unique Horse Sample36

text: Equus caballus

text: Equus caballus


text: M.Fazel Harighi

characteristic: collected by

text: Goat

text: Blood

characteristic: derived from

text: Blood_sampleCH1 - This DNA was derived from Whole Blood

text: Malaysia

characteristic: geographic location (country and/or sea)

text: Negeri sembilan state

characteristic: geographic location (region and locality)

text: Capra hircus

text: Capra hircus

text: Male

text: This association study investigated the role of SPAG11 gene polymorphisms along the full length of exons 1 and 2 (including promoter 1 and intron 1) in reproductive traits of bucks.

text: Determination of the role of some single nucleotide polymorphisms of SPAG11 gene in semen quality and testicular traits of Boer goats

Theriogynecology and Cytoogenetic

Address: Universiti Putra Malaysia- 43400 UPM Serdang- Selangor Darul Ehsan

MohammadFazel Harighi

FirstName: MohammadFazel

LastName: Harighi


characteristic: animal age at collection

text: kidney cortex from an adult male texel x blackface sheep, OAR_RI_AM3

text: adult

characteristic: developmental stage

text: fed

characteristic: fasted status

text: normal

characteristic: health status at collection

text: specimen from organism

text: Ovis aries

text: cortex of kidney

characteristic: organism part

text: FAANG

characteristic: project

text: Roslin Sheep Atlas

Alan Archibald

FirstName: Alan

LastName: Archibald


characteristic: SRA accession

text: heart auricles left from an adult male texel x blackface sheep, OAR_RI_AM1

text: adult

text: fed

text: normal

text: specimen from organism

characteristic: material

text: Ovis aries

characteristic: organism

text: cardiac muscle tissue of left auricle

text: FAANG

characteristic: specimen collection date

characteristic: specimen collection protocol

text: Roslin Sheep Atlas

Bruce Whitelaw

FirstName: Bruce

LastName: Whitelaw


text: mesenteric lymph node from an adult male texel x blackface sheep, OAR_RI_AM1

text: adult

text: fed

text: normal

text: specimen from organism

text: Ovis aries

text: mesenteric lymph node

text: FAANG

characteristic: submission description

characteristic: submission identifier

text: Roslin Sheep Atlas

characteristic: submission title

David Hume

FirstName: David

LastName: Hume


text: CULTIVATED

characteristic: collected by

text: bread wheat

characteristic: common name

text: SRM NOGAL

characteristic: cultivar

text: exome sequences of ExomeCapture-DAS5-003070 - .

characteristic: description

text: 2 week old

characteristic: dev stage

text: Argentina

characteristic: isolate

text: Australian Winter Cereals Collection (AWCC)

characteristic: lab host

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: subsp. aestivum

characteristic: sub species

text: The exome sequenced hexaploid wheat accessions were selected from a worldwide population of landraces and cultivars obtained from the USDA National Small Grains Collection and the Australian Grains Genebank (formally the Australian Winter Cereal Collection). The worldwide population comprised 3990 accessions from 106 countries that were genotyped using the Infinium iSelect 90K SNP wheat bead chip array40. The MCG method41 was used to select accessions for exome sequencing. This method uses a genetic relationship matrix calculated from genotype data to iteratively chose and arbitrary number of accessions (in the case of this study 20% of the accessions) that collectively explain the largest proportion of variance in genetic relationships among the whole set. Genomic DNA was extracted from leaf tissue for each accession using the Agencourt DNAdvance Genomic DNA Isolation Kit (Beckman Coulter) and subjected to sequence capture using the NimbleGen SeqCap EZ wheat whole genome assay12. In brief, 1 µg of DNA was fragmented with the Covaris S2 instrument to obtain an average fragment length of 300 bp. Shorter fragments were removed using Agencourt AMPure XP beads (Beckman Coulter). The KAPA Library Preparation Kit (Kapa Biosystems) and adapters supplied in the NimbleGen SeqCap EZ Reagent Kit Plus v2 (Roche) were used to prepare sample libraries for the capture assay, according to the KAPA protocol but excluding steps 8.1-8.22. The quality and yield of each sample library was assessed using an Agilent 2200 TapeStation (Agilent Technologies) before proceeding to the sequence capture assay following the Roche protocol. Each target capture sequence enriched sample library was sequenced on an Illumina HiSeq2000 instrument (Illumina) to generate about 30 million reads per accession.

text: Exome sequencing reveals the role of historic wild relative introgressions in shaping the adaptive landscape of the wheat genome

text: leaf

characteristic: tissue type

characteristic: variety

Eduard Akhunov

Address: 1712 Claflin Road, Manhattan, KS 66506, USA

Fei He

FirstName: Fei

LastName: He


characteristic: SRA accession

text: CULTIVATED

text: bread wheat

text: HOSTIANUM

text: exome sequences of ExomeCapture-DAS5-002477 - .

text: 2 week old

text: Russia

characteristic: geographic location (country and/or sea)

text: Triticum aestivum subsp. aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


characteristic: ancestory

text: CULTIVATED

text: bread wheat

text: exome sequences of ExomeCapture-DAS5-000053 - BC1F4 selection

text: 2 week old

text: spring wheat

characteristic: ecotype

text: Australia

text: AVS

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission description

text: leaf

text: Aus30262 = DOY1/AE.SQUARROSA (333)


text: CULTIVATED

characteristic: collected by

text: bread wheat

text: ONOHOISKAJA 4

text: exome sequences of ExomeCapture-DAS5-002833 - .

text: 2 week old

text: Russia

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission identifier

characteristic: submission title

text: leaf


text: COLLECTED 10/18/1984 Algeria by Hilu, K., Virginia Polytechnic Inst. & State Univ.; Randall, J., VPI & SU

text: bread wheat

characteristic: common name

text: Kammah

characteristic: cultivar

text: exome sequences of ExomeCapture-DAS5-004460 - Sown October, harvested April. Irrigated. Used for food.

characteristic: description

text: 2 week old

text: spring wheat

text: Algeria

text: PI 527449

text: USDA Germplasm Resources Information Network

characteristic: lat lon

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


text: CULTIVATED

text: bread wheat

text: MT 8192

text: exome sequences of ExomeCapture-DAS5-002775 - .

text: 2 week old

characteristic: dev stage

text: spring wheat

text: USA

characteristic: isolate

characteristic: lab host

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: subsp. aestivum

text: leaf


characteristic: SRA accession

text: CULTIVATED

text: pasta wheat

text: KHURGENO BOOGDA

text: exome sequences of ExomeCapture-DAS5-002534 - Brown

text: 2 week old

text: winter wheat

text: Azerbaijan

text: Triticum turgidum subsp. durum

text: Triticum turgidum subsp. durum

text: subsp. durum

characteristic: sub species

text: leaf

characteristic: tissue type

characteristic: variety


text: COLLECTED 1960 Ilam, Iran by Harlan, J., USDA-ARS

text: bread wheat

text: exome sequences of ExomeCapture-DAS5-003670 - .

text: 2 week old

text: spring wheat

characteristic: ecotype

text: Iran

characteristic: geographic location (country and/or sea)

text: PI 268305

text: Triticum aestivum subsp. aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


characteristic: ancestory

text: DEVELOPED Switzerland by SFEA. DONATED 12/08/1969 by Ingold, M., Federal Agricultural Research Station

characteristic: collected by

text: bread wheat

text: B 359

text: exome sequences of ExomeCapture-DAS5-004055 - .

text: 2 week old

text: spring wheat

text: Switzerland

text: PI 351968

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission description

characteristic: submission identifier

text: leaf

text: :B 359;:T-2239


text: CULTIVATED

text: bread wheat

characteristic: common name

characteristic: cultivar

text: exome sequences of ExomeCapture-DAS5-000007 - BC1F4 selection

characteristic: description

text: 2 week old

text: spring wheat

text: Australia

text: AVS

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission title

text: leaf

text: Aus29020 = CROC_1/AE.SQUARROSA (517)


text: LANDRACE

text: bread wheat

text: CANARY 2

text: exome sequences of ExomeCapture-WATKINS-007187 - .

text: 2 week old

characteristic: dev stage

text: spring wheat

text: Spain

characteristic: isolate

characteristic: lab host

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


characteristic: SRA accession

text: CULTIVATED

text: bread wheat

text: RUSSIAN

text: exome sequences of ExomeCapture-DAS5-002968 - .

text: 2 week old

text: Russia

text: Australian Winter Cereals Collection (AWCC)

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: subsp. aestivum

characteristic: sub species

text: leaf


text: LANDRACE

text: bread wheat

text: SINAI 8

text: exome sequences of ExomeCapture-WATKINS-007542 - .

text: 2 week old

text: spring wheat

characteristic: ecotype

text: Egypt

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: The exome sequenced hexaploid wheat accessions were selected from a worldwide population of landraces and cultivars obtained from the USDA National Small Grains Collection and the Australian Grains Genebank (formally the Australian Winter Cereal Collection). The worldwide population comprised 3990 accessions from 106 countries that were genotyped using the Infinium iSelect 90K SNP wheat bead chip array40. The MCG method41 was used to select accessions for exome sequencing. This method uses a genetic relationship matrix calculated from genotype data to iteratively chose and arbitrary number of accessions (in the case of this study 20% of the accessions) that collectively explain the largest proportion of variance in genetic relationships among the whole set. Genomic DNA was extracted from leaf tissue for each accession using the Agencourt DNAdvance Genomic DNA Isolation Kit (Beckman Coulter) and subjected to sequence capture using the NimbleGen SeqCap EZ wheat whole genome assay12. In brief, 1 µg of DNA was fragmented with the Covaris S2 instrument to obtain an average fragment length of 300 bp. Shorter fragments were removed using Agencourt AMPure XP beads (Beckman Coulter). The KAPA Library Preparation Kit (Kapa Biosystems) and adapters supplied in the NimbleGen SeqCap EZ Reagent Kit Plus v2 (Roche) were used to prepare sample libraries for the capture assay, according to the KAPA protocol but excluding steps 8.1-8.22. The quality and yield of each sample library was assessed using an Agilent 2200 TapeStation (Agilent Technologies) before proceeding to the sequence capture assay following the Roche protocol. Each target capture sequence enriched sample library was sequenced on an Illumina HiSeq2000 instrument (Illumina) to generate about 30 million reads per accession.

text: Exome sequencing reveals the role of historic wild relative introgressions in shaping the adaptive landscape of the wheat genome

text: leaf

characteristic: tissue type

characteristic: variety


text: LANDRACE

text: bread wheat

text: AZERBAIJAN W73337

text: exome sequences of ExomeCapture-WATKINS-007784 - .

text: 2 week old

text: spring wheat

text: Azerbaijan

characteristic: geographic location (country and/or sea)

text: Triticum aestivum subsp. aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


text: T. timopheevii/3*T. vulgare//2*Lemhi

characteristic: ancestory

text: DEVELOPED Zambia by Mount Makulu Research Station; Pope, W., University of Idaho

characteristic: collected by

text: bread wheat

text: Idaho 1880 NR BB

text: exome sequences of ExomeCapture-DAS5-001491 - .

text: 2 week old

text: spring wheat

text: Zambia

text: PI 234239

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission description

text: leaf

text: :Idaho 1880 NR BB


text: DEVELOPED Zurich, Switzerland by Swiss Experiment Station for Agriculture. DONATED 12/08/1969 by Ingold, M., Federal Agricultural Research Station

text: bread wheat

characteristic: common name

text: B 265

characteristic: cultivar

text: exome sequences of ExomeCapture-DAS5-004054 - .

text: 2 week old

text: spring wheat

text: Switzerland

text: PI 351908

text: USDA Germplasm Resources Information Network

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission identifier

text: leaf

text: :B 265;:T-2139


text: COLLECTED 09/1926 Heilongjiang, China by Dorsett, P., USDA-Bureau of Plant Industry; McLorn, D., Postal Commissioner

text: bread wheat

text: exome sequences of ExomeCapture-PI-70613 - .

characteristic: description

text: 2 week old

characteristic: dev stage

text: spring wheat

text: China

text: PI 70613

text: by Eduard Akhunov

characteristic: lat lon

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission title

text: leaf

text: :8194;:CItr 8957;:CI 8957


characteristic: SRA accession

text: COLLECTED Israel by. DONATED 1947 by Levine, M., Minnesota Agric. Exp. Station

text: bread wheat

text: Australith

text: exome sequences of ExomeCapture-DAS5-001203 - .

text: 2 week old

text: winter wheat

text: Israel

text: CItr 12808

characteristic: isolate

characteristic: lab host

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: subsp. aestivum

text: leaf

text: :Australith;:CI 12808


text: Kenya/Florence/Dundee

text: DEVELOPED New South Wales, Australia by Wenholz, H., Department of Agriculture

text: bread wheat

text: exome sequences of ExomeCapture-DAS5-003320 - .

text: 2 week old

text: spring wheat

characteristic: ecotype

text: Australia

text: PI 130645

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: sub species

text: leaf

characteristic: tissue type

characteristic: variety


text: LANDRACE

characteristic: collected by

text: bread wheat

text: SALONIKA 10

text: exome sequences of ExomeCapture-WATKINS-007738 - .

text: 2 week old

text: spring wheat

text: Greece

characteristic: geographic location (country and/or sea)

text: Triticum aestivum subsp. aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


text: Selection from PI 62365

characteristic: ancestory

text: COLLECTED Tachira, Venezuela by Pittier, H., Museo Comercial, Ministero de Relaciones Exteriores

text: bread wheat

characteristic: common name

characteristic: cultivar

text: exome sequences of ExomeCapture-DAS5-004242 - .

text: 2 week old

text: spring wheat

text: Venezuela

text: CItr 8359

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission description

text: leaf

text: :4;:AUS 7449;:CI 8359


text: COLLECTED Argentina by Vallega, J., Estacion Experimental Central

text: bread wheat

text: Gzal. Mitre

text: exome sequences of ExomeCapture-DAS5-004653 - .

characteristic: description

text: 2 week old

characteristic: dev stage

text: spring wheat

text: Argentina

text: PI 213572

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: The exome sequenced hexaploid wheat accessions were selected from a worldwide population of landraces and cultivars obtained from the USDA National Small Grains Collection and the Australian Grains Genebank (formally the Australian Winter Cereal Collection). The worldwide population comprised 3990 accessions from 106 countries that were genotyped using the Infinium iSelect 90K SNP wheat bead chip array40. The MCG method41 was used to select accessions for exome sequencing. This method uses a genetic relationship matrix calculated from genotype data to iteratively chose and arbitrary number of accessions (in the case of this study 20% of the accessions) that collectively explain the largest proportion of variance in genetic relationships among the whole set. Genomic DNA was extracted from leaf tissue for each accession using the Agencourt DNAdvance Genomic DNA Isolation Kit (Beckman Coulter) and subjected to sequence capture using the NimbleGen SeqCap EZ wheat whole genome assay12. In brief, 1 µg of DNA was fragmented with the Covaris S2 instrument to obtain an average fragment length of 300 bp. Shorter fragments were removed using Agencourt AMPure XP beads (Beckman Coulter). The KAPA Library Preparation Kit (Kapa Biosystems) and adapters supplied in the NimbleGen SeqCap EZ Reagent Kit Plus v2 (Roche) were used to prepare sample libraries for the capture assay, according to the KAPA protocol but excluding steps 8.1-8.22. The quality and yield of each sample library was assessed using an Agilent 2200 TapeStation (Agilent Technologies) before proceeding to the sequence capture assay following the Roche protocol. Each target capture sequence enriched sample library was sequenced on an Illumina HiSeq2000 instrument (Illumina) to generate about 30 million reads per accession.

characteristic: submission identifier

text: leaf

text: :Gzal. Mitre;:D.I.V. 6694


characteristic: SRA accession

text: CULTIVATED

text: pasta wheat

text: exome sequences of ExomeCapture-DAS5-002281 - .

text: 2 week old

text: Romania

characteristic: isolate

text: Australian Winter Cereals Collection (AWCC)

text: Triticum turgidum subsp. durum

text: Triticum turgidum subsp. durum

text: subsp. durum

text: Exome sequencing reveals the role of historic wild relative introgressions in shaping the adaptive landscape of the wheat genome

characteristic: submission title

text: leaf


text: COLLECTED 08/21/1948 Van, Turkey by Harlan, J., USDA-ARS

text: bread wheat

text: Tir

text: exome sequences of ExomeCapture-DAS5-004606 - 'Tir' in Turkish refers to a 'deep-seeded wheat'.

text: 2 week old

text: winter wheat

characteristic: ecotype

text: Turkey

text: PI 178184

characteristic: lab host

characteristic: lat lon

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: subsp. aestivum

text: leaf

text: :Tir;:7702;:AUS 8785


text: CULTIVATED

characteristic: collected by

text: pasta wheat

text: HORDEIFORME 189

text: exome sequences of ExomeCapture-DAS5-002471 - .

text: 2 week old

text: Russia

text: Triticum turgidum subsp. durum

text: Triticum turgidum subsp. durum

text: subsp. durum

characteristic: sub species

text: leaf

characteristic: tissue type

characteristic: variety


ExomeCapture-Bakhatwa

text: bread wheat

characteristic: common name

text: exome sequences of ExomeCapture-Bakhatwa - .

text: 2 week old

text: spring wheat

text: not provided

characteristic: geographic location (country and/or sea)

text: by Eduard Akhunov

text: Triticum aestivum subsp. aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


text: CULTIVATED

text: pasta wheat

text: Grajia

characteristic: cultivar

text: exome sequences of ExomeCapture-DAS5-002425 - .

characteristic: description

text: 2 week old

text: Italy

text: Triticum turgidum subsp. durum

text: Triticum turgidum subsp. durum

text: subsp. durum

characteristic: submission description

text: leaf


characteristic: SRA accession

characteristic: ancestory

text: CULTIVATED

text: bread wheat

text: exome sequences of ExomeCapture-DAS5-000291 - BC1F4 selection

text: 2 week old

characteristic: dev stage

text: spring wheat

text: Australia

text: AVS

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission identifier

text: leaf

text: Aus33384 = GARZA/BOY//AE.SQUARROSA (427)


text: Wisc. 245 sib

text: DEVELOPED Rift Valley, Kenya by Plant Breeding Station. DONATED 08/06/1937 by Wenholz, H., Department of Agriculture

text: bread wheat

text: C 10854

text: exome sequences of ExomeCapture-DAS5-003753 - .

text: 2 week old

text: spring wheat

characteristic: ecotype

text: Kenya

text: PI 124739

characteristic: isolate

text: USDA Germplasm Resources Information Network

characteristic: lab host

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission title

text: leaf

text: :C 10854


text: LANDRACE

characteristic: collected by

text: bread wheat

text: MOROCCO 39

text: exome sequences of ExomeCapture-WATKINS-007435 - .

text: 2 week old

text: spring wheat

text: Morocco

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: subsp. aestivum

characteristic: sub species

text: leaf


text: COLLECTED New South Wales, Australia by Department of Agriculture. DEVELOPED Rift Valley, Kenya by Plant Breeding Station

text: bread wheat

characteristic: common name

text: C 10859

text: exome sequences of ExomeCapture-DAS5-003754 - .

text: 2 week old

text: spring wheat

text: Kenya

text: PI 117621

characteristic: lat lon

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf

characteristic: tissue type

text: :C 10859

characteristic: variety


text: CULTIVATED

text: bread wheat

characteristic: cultivar

text: exome sequences of ExomeCapture-DAS5-000110 - BC1F4 selection

characteristic: description

text: 2 week old

text: spring wheat

text: Australia

characteristic: geographic location (country and/or sea)

text: AVS

text: Triticum aestivum subsp. aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: The exome sequenced hexaploid wheat accessions were selected from a worldwide population of landraces and cultivars obtained from the USDA National Small Grains Collection and the Australian Grains Genebank (formally the Australian Winter Cereal Collection). The worldwide population comprised 3990 accessions from 106 countries that were genotyped using the Infinium iSelect 90K SNP wheat bead chip array40. The MCG method41 was used to select accessions for exome sequencing. This method uses a genetic relationship matrix calculated from genotype data to iteratively chose and arbitrary number of accessions (in the case of this study 20% of the accessions) that collectively explain the largest proportion of variance in genetic relationships among the whole set. Genomic DNA was extracted from leaf tissue for each accession using the Agencourt DNAdvance Genomic DNA Isolation Kit (Beckman Coulter) and subjected to sequence capture using the NimbleGen SeqCap EZ wheat whole genome assay12. In brief, 1 µg of DNA was fragmented with the Covaris S2 instrument to obtain an average fragment length of 300 bp. Shorter fragments were removed using Agencourt AMPure XP beads (Beckman Coulter). The KAPA Library Preparation Kit (Kapa Biosystems) and adapters supplied in the NimbleGen SeqCap EZ Reagent Kit Plus v2 (Roche) were used to prepare sample libraries for the capture assay, according to the KAPA protocol but excluding steps 8.1-8.22. The quality and yield of each sample library was assessed using an Agilent 2200 TapeStation (Agilent Technologies) before proceeding to the sequence capture assay following the Roche protocol. Each target capture sequence enriched sample library was sequenced on an Illumina HiSeq2000 instrument (Illumina) to generate about 30 million reads per accession.

text: leaf

text: Aus30269 = LARU/AE.SQUARROSA (507)


characteristic: SRA accession

text: COLLECTED 01/21/1974 Arusi, Ethiopia by International Board for Plant Genetic Resources

text: bread wheat

text: Tucursindi

text: exome sequences of ExomeCapture-DAS5-001932 - .

text: 2 week old

characteristic: dev stage

text: spring wheat

text: Ethiopia

text: PI 534284

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission description

text: leaf

text: :Tucursindi;:MG 07729;:NSL 97818


text: COLLECTED 1988 Yemen by Guarino, L., International Plant Genetic Resources Institute

text: bread wheat

text: exome sequences of ExomeCapture-DAS5-004245 - .

text: 2 week old

text: spring wheat

characteristic: ecotype

text: Yemen

text: PI 574356

characteristic: isolate

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission identifier

text: Exome sequencing reveals the role of historic wild relative introgressions in shaping the adaptive landscape of the wheat genome

text: leaf

text: :1097;:NSGC 1384


text: CULTIVATED

characteristic: collected by

text: bread wheat

text: CHARA

text: exome sequences of ExomeCapture-DAS5-002230 - Hard / White

text: 2 week old

text: spring wheat

text: Australia

text: Australian Winter Cereals Collection (AWCC)

characteristic: lab host

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission title

text: leaf


text: LANDRACE

text: bread wheat

characteristic: common name

text: CRETE 2

text: exome sequences of ExomeCapture-WATKINS-007077 - .

text: 2 week old

text: spring wheat

text: Greece

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: subsp. aestivum

characteristic: sub species

text: leaf


text: selection from Turkmenistan landvariety

characteristic: ancestory

text: DEVELOPED Uzbekistan by. DONATED 01/25/1972 by N.I. Vavilov Institute of Plant Industry

text: bread wheat

text: Kzyl Sark

text: exome sequences of ExomeCapture-DAS5-001577 - .

text: 2 week old

text: winter wheat

text: Uzbekistan

text: PI 372132

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf

characteristic: tissue type

text: :Kzyl Sark;:WIR 39320

characteristic: variety


text: bread wheat

text: Klein Chamaco

characteristic: cultivar

text: exome sequences of ExomeCapture-WSC-2-5 - .

characteristic: description

text: 2 week old

text: spring wheat

text: Argentina

characteristic: geographic location (country and/or sea)

text: Klein Chamaco

text: by Eduard Akhunov

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


characteristic: SRA accession

text: CULTIVATED

text: bread wheat

text: TAM W-104

text: exome sequences of ExomeCapture-DAS5-003109 - Red

text: 2 week old

characteristic: dev stage

text: winter wheat

text: USA

text: Triticum aestivum subsp. aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


text: CULTIVATED

text: pasta wheat

text: SWONSKA

text: exome sequences of ExomeCapture-DAS5-003094 - .

text: 2 week old

text: Russia

characteristic: isolate

text: Triticum turgidum subsp. durum

text: Triticum turgidum subsp. durum

text: subsp. durum

characteristic: submission description

text: leaf


text: COLLECTED Washington, United States by USDA-Bureau of Plant Industry

characteristic: collected by

text: dinkel wheat

text: Bearded Spelt

text: exome sequences of ExomeCapture-DAS5-004183 - .

text: 2 week old

text: spring wheat

characteristic: ecotype

text: USA

text: PI 168680

text: USDA Germplasm Resources Information Network

characteristic: lat lon

text: Triticum aestivum subsp. spelta

text: Triticum aestivum subsp. spelta

text: subsp. spelta

characteristic: submission identifier

text: leaf

text: :Bearded Spelt;:CItr 1774;:CI 1774


text: CULTIVATED

text: bread wheat

characteristic: common name

text: exome sequences of ExomeCapture-WATKINS-007056 - .

text: 2 week old

text: F

text: Australia

characteristic: lab host

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: subsp. aestivum

text: The exome sequenced hexaploid wheat accessions were selected from a worldwide population of landraces and cultivars obtained from the USDA National Small Grains Collection and the Australian Grains Genebank (formally the Australian Winter Cereal Collection). The worldwide population comprised 3990 accessions from 106 countries that were genotyped using the Infinium iSelect 90K SNP wheat bead chip array40. The MCG method41 was used to select accessions for exome sequencing. This method uses a genetic relationship matrix calculated from genotype data to iteratively chose and arbitrary number of accessions (in the case of this study 20% of the accessions) that collectively explain the largest proportion of variance in genetic relationships among the whole set. Genomic DNA was extracted from leaf tissue for each accession using the Agencourt DNAdvance Genomic DNA Isolation Kit (Beckman Coulter) and subjected to sequence capture using the NimbleGen SeqCap EZ wheat whole genome assay12. In brief, 1 µg of DNA was fragmented with the Covaris S2 instrument to obtain an average fragment length of 300 bp. Shorter fragments were removed using Agencourt AMPure XP beads (Beckman Coulter). The KAPA Library Preparation Kit (Kapa Biosystems) and adapters supplied in the NimbleGen SeqCap EZ Reagent Kit Plus v2 (Roche) were used to prepare sample libraries for the capture assay, according to the KAPA protocol but excluding steps 8.1-8.22. The quality and yield of each sample library was assessed using an Agilent 2200 TapeStation (Agilent Technologies) before proceeding to the sequence capture assay following the Roche protocol. Each target capture sequence enriched sample library was sequenced on an Illumina HiSeq2000 instrument (Illumina) to generate about 30 million reads per accession.

characteristic: submission title

text: leaf


text: COLLECTED Madhya Pradesh, India by Ekbote, R., Department of Agriculture. DONATED 07/26/1948 by Koelz, W., USDA-Bureau of Plant Industry

text: bread wheat

text: exome sequences of ExomeCapture-WSC-8-5 - .

text: 2 week old

text: spring wheat

text: Indian Ocean

text: PI 166180

text: by Eduard Akhunov

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: sub species

text: leaf

characteristic: tissue type

characteristic: variety


text: selection from Daws

characteristic: ancestory

text: DEVELOPED Washington, United States by Morris, C., USDA-ARS

text: bread wheat

text: Daws Low PPO

characteristic: cultivar

text: exome sequences of ExomeCapture-DAS5-004379 - Near isogenic line of soft white winter wheat with lower levels of grain polyphenol oxidase (PPO).

characteristic: description

text: 2 week old

text: spring wheat

text: USA

characteristic: geographic location (country and/or sea)

text: PI 660670

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf

text: :Daws Low PPO;:WQL8DAWSL;USA126:NSGC 19513


characteristic: SRA accession

text: CULTIVATED

text: bread wheat

text: exome sequences of ExomeCapture-DAS5-000079 - BC1F4 selection

text: 2 week old

characteristic: dev stage

text: spring wheat

text: Australia

characteristic: isolate

text: AVS

text: Triticum aestivum subsp. aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: Exome sequencing reveals the role of historic wild relative introgressions in shaping the adaptive landscape of the wheat genome

text: leaf

text: Aus30265 = FALCIE.SQUARROSA (389)


text: COLLECTED 05/27/1975 Algeria by Consiglio Nazionale delle Ricerche

characteristic: collected by

text: bread wheat

text: MG 17960

text: exome sequences of ExomeCapture-WSC-5-12 - .

text: 2 week old

text: spring wheat

characteristic: ecotype

text: Algeria

text: PI 470817

text: by Eduard Akhunov

characteristic: lat lon

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission description

text: leaf

text: :MG 17960


text: CULTIVATED

text: pasta wheat

characteristic: common name

text: BUEALA NERA CORTA

text: exome sequences of ExomeCapture-DAS5-002199

text: 2 week old

text: Italy

text: Australian Winter Cereals Collection (AWCC)

characteristic: lab host

text: Triticum turgidum subsp. durum

text: Triticum turgidum subsp. durum

characteristic: scientific name

text: subsp. durum

characteristic: submission identifier

text: leaf


text: COLLECTED Central, Paraguay by Loegering, W., USDA-ARS, Crops Research Division

text: bread wheat

text: Jhiasevava

text: exome sequences of ExomeCapture-DAS5-001524 - .

text: 2 week old

text: spring wheat

text: Paraguay

text: PI 230651

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: sub species

characteristic: submission title

text: leaf

characteristic: tissue type

text: :Jhiasevava

characteristic: variety


text: Erythrospermum 15/Kawvale

characteristic: ancestory

text: DEVELOPED Kiev, Ukraine by. DONATED 12/30/1959 by N.I. Vavilov Institute of Plant Industry

text: bread wheat

text: Belocerkovskaja 198

characteristic: cultivar

text: exome sequences of ExomeCapture-DAS5-004138 - .

characteristic: description

text: 2 week old

text: spring wheat

text: Ukraine

characteristic: geographic location (country and/or sea)

text: PI 262616

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf

text: :Belocerkovskaja 198;:WIR 41153


characteristic: SRA accession

text: CULTIVATED

text: pasta wheat

text: RUSSIA 4

text: exome sequences of ExomeCapture-DAS5-002961 - .

text: 2 week old

characteristic: dev stage

text: Russia

characteristic: isolate

text: Triticum turgidum subsp. durum

characteristic: organism

text: Triticum turgidum subsp. durum

text: subsp. durum

text: leaf


text: LANDRACE

characteristic: collected by

text: pasta wheat

text: RASPINEGRO DE ALCOLEA

text: exome sequences of ExomeCapture-DAS5-002916 - .

text: 2 week old

text: spring wheat

characteristic: ecotype

text: Spain

text: Triticum turgidum subsp. durum

text: Triticum turgidum subsp. durum

text: subsp. durum

text: The exome sequenced hexaploid wheat accessions were selected from a worldwide population of landraces and cultivars obtained from the USDA National Small Grains Collection and the Australian Grains Genebank (formally the Australian Winter Cereal Collection). The worldwide population comprised 3990 accessions from 106 countries that were genotyped using the Infinium iSelect 90K SNP wheat bead chip array40. The MCG method41 was used to select accessions for exome sequencing. This method uses a genetic relationship matrix calculated from genotype data to iteratively chose and arbitrary number of accessions (in the case of this study 20% of the accessions) that collectively explain the largest proportion of variance in genetic relationships among the whole set. Genomic DNA was extracted from leaf tissue for each accession using the Agencourt DNAdvance Genomic DNA Isolation Kit (Beckman Coulter) and subjected to sequence capture using the NimbleGen SeqCap EZ wheat whole genome assay12. In brief, 1 µg of DNA was fragmented with the Covaris S2 instrument to obtain an average fragment length of 300 bp. Shorter fragments were removed using Agencourt AMPure XP beads (Beckman Coulter). The KAPA Library Preparation Kit (Kapa Biosystems) and adapters supplied in the NimbleGen SeqCap EZ Reagent Kit Plus v2 (Roche) were used to prepare sample libraries for the capture assay, according to the KAPA protocol but excluding steps 8.1-8.22. The quality and yield of each sample library was assessed using an Agilent 2200 TapeStation (Agilent Technologies) before proceeding to the sequence capture assay following the Roche protocol. Each target capture sequence enriched sample library was sequenced on an Illumina HiSeq2000 instrument (Illumina) to generate about 30 million reads per accession.

characteristic: submission description

text: leaf


text: CULTIVATED

text: bread wheat

characteristic: common name

text: exome sequences of ExomeCapture-DAS5-000135 - BC1F4 selection

text: 2 week old

text: spring wheat

text: Australia

text: AVS

characteristic: lab host

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: subsp. aestivum

text: leaf

text: Aus30274 = SCA/AE.SQUARROSA (248)


text: COLLECTED Serbia by Inst. for Plant Breeding & Introduction

text: dinkel wheat

text: Album

text: exome sequences of ExomeCapture-DAS5-003993 - .

text: 2 week old

text: spring wheat

text: Serbia

text: PI 221419

text: USDA Germplasm Resources Information Network

text: Triticum aestivum subsp. spelta

text: Triticum aestivum subsp. spelta

text: subsp. spelta

characteristic: sub species

characteristic: submission identifier

characteristic: submission title

text: leaf

text: :Album


text: Trapeano/Cajeme 54

characteristic: ancestory

text: DEVELOPED Rio Grande do Sul, Brazil by

text: bread wheat

text: exome sequences of ExomeCapture-DAS5-003402 - Entry in the 1965 ISWRN.

text: 2 week old

text: spring wheat

text: Brazil

text: CItr 14371

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf

characteristic: tissue type

text: :8475-59;:CI 14371

characteristic: variety


text: COLLECTED 1968 Badakhshan, Afghanistan by Bennett, E., Crop Ecology & Genetic Resources Unit

text: bread wheat

text: FAO 26.430

characteristic: cultivar

text: exome sequences of ExomeCapture-DAS5-003288 - .

characteristic: description

text: 2 week old

text: spring wheat

text: Afghanistan

characteristic: geographic location (country and/or sea)

text: PI 347171

characteristic: lat lon

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: Exome sequencing reveals the role of historic wild relative introgressions in shaping the adaptive landscape of the wheat genome

text: leaf

text: :FAO 26.430;:ICARDA-IG-90255


characteristic: SRA accession

text: CULTIVATED

text: bread wheat

text: ACA 903B

text: exome sequences of ExomeCapture-DAS5-002017

text: 2 week old

characteristic: dev stage

text: Argentina

characteristic: isolate

text: Triticum aestivum subsp. aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


text: CULTIVATED

characteristic: collected by

text: bread wheat

characteristic: common name

text: exome sequences of ExomeCapture-DAS5-000734 - BC2F4 selection

text: 2 week old

text: spring wheat

characteristic: ecotype

text: Australia

text: AVS

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission description

text: leaf

text: Aus30258 = DOY1/AE.SQUARROSA (293)


text: CULTIVATED

text: bread wheat

text: BENZENGUBSKAIA

text: exome sequences of ExomeCapture-DAS5-002121

text: 2 week old

text: Russia

text: Australian Winter Cereals Collection (AWCC)

characteristic: lab host

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: subsp. aestivum

characteristic: sub species

characteristic: submission identifier

text: leaf


text: COLLECTED Uzbekistan by. DONATED 10/17/1991 by N.I. Vavilov Research Institute of Plant Industry

text: bread wheat

text: Buhara Bugdai

text: exome sequences of ExomeCapture-DAS5-004240 - .

text: 2 week old

text: spring wheat

text: Uzbekistan

text: PI 565355

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission title

text: leaf

characteristic: tissue type

text: :Buhara Bugdai;:WIR 13595;:MAC9192-668

characteristic: variety


characteristic: ancestory

text: DEVELOPED Rift Valley, Kenya by Plant Breeding Station

text: bread wheat

characteristic: cultivar

text: exome sequences of ExomeCapture-DAS5-003750 - .

characteristic: description

text: 2 week old

text: spring wheat

text: Kenya

characteristic: geographic location (country and/or sea)

text: PI 254125

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


characteristic: SRA accession

text: Bielers Edelepp/Dr. Lassers Kolben

text: DEVELOPED Austria by Lasser. DONATED 01/08/1959 by Seed Testing Station

text: bread wheat

text: Drauhefener Kolben

text: exome sequences of ExomeCapture-DAS5-003346 - .

text: 2 week old

characteristic: dev stage

text: spring wheat

text: Austria

text: PI 254834

characteristic: isolate

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: The exome sequenced hexaploid wheat accessions were selected from a worldwide population of landraces and cultivars obtained from the USDA National Small Grains Collection and the Australian Grains Genebank (formally the Australian Winter Cereal Collection). The worldwide population comprised 3990 accessions from 106 countries that were genotyped using the Infinium iSelect 90K SNP wheat bead chip array40. The MCG method41 was used to select accessions for exome sequencing. This method uses a genetic relationship matrix calculated from genotype data to iteratively chose and arbitrary number of accessions (in the case of this study 20% of the accessions) that collectively explain the largest proportion of variance in genetic relationships among the whole set. Genomic DNA was extracted from leaf tissue for each accession using the Agencourt DNAdvance Genomic DNA Isolation Kit (Beckman Coulter) and subjected to sequence capture using the NimbleGen SeqCap EZ wheat whole genome assay12. In brief, 1 µg of DNA was fragmented with the Covaris S2 instrument to obtain an average fragment length of 300 bp. Shorter fragments were removed using Agencourt AMPure XP beads (Beckman Coulter). The KAPA Library Preparation Kit (Kapa Biosystems) and adapters supplied in the NimbleGen SeqCap EZ Reagent Kit Plus v2 (Roche) were used to prepare sample libraries for the capture assay, according to the KAPA protocol but excluding steps 8.1-8.22. The quality and yield of each sample library was assessed using an Agilent 2200 TapeStation (Agilent Technologies) before proceeding to the sequence capture assay following the Roche protocol. Each target capture sequence enriched sample library was sequenced on an Illumina HiSeq2000 instrument (Illumina) to generate about 30 million reads per accession.

text: leaf

text: :Drauhefener Kolben


text: CULTIVATED

characteristic: collected by

text: bread wheat

characteristic: common name

text: KLEIN CACIQUE

text: exome sequences of ExomeCapture-DAS5-002555 - .

text: 2 week old

text: Argentina

text: Triticum aestivum subsp. aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


text: CULTIVATED

text: bread wheat

text: exome sequences of ExomeCapture-DAS5-000305 - BC1F4 selection

text: 2 week old

text: spring wheat

characteristic: ecotype

text: Australia

text: AVS

characteristic: lab host

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission description

text: leaf

text: Aus33392 = CROC_1/AE.SQUARROSA (507)


text: LANDRACE

text: bread wheat

text: AUSTRALIA CCI W370

text: exome sequences of ExomeCapture-WATKINS-007162 - .

text: 2 week old

text: spring wheat

text: Australia

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: subsp. aestivum

characteristic: sub species

characteristic: submission identifier

text: leaf


text: COLLECTED 06/05/1979 Rapti, Nepal by Erskine, W., IBPGR, FAO; Shrestha, P., IBPGR; Bourgois, J., IBPGR

text: bread wheat

text: exome sequences of ExomeCapture-WSC-5-13 - Awnless. Seeds red.

text: 2 week old

text: spring wheat

text: Nepal

text: PI 445736

text: by Eduard Akhunov

characteristic: lat lon

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission title

text: leaf

characteristic: tissue type

text: :148;:Dudhe Mudulo;:FAO 51.876

characteristic: variety


text: Cross 7/Dreadnought//Cross 7/Hofed

characteristic: ancestory

text: DEVELOPED 1955 South Island, New Zealand by Dept. of Scientific & Industrial Res.

text: bread wheat

text: Aotea

characteristic: cultivar

text: exome sequences of ExomeCapture-DAS5-004328 - .

characteristic: description

text: 2 week old

text: winter wheat

text: New Zealand

characteristic: geographic location (country and/or sea)

text: PI 266860

text: USDA Germplasm Resources Information Network

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: Exome sequencing reveals the role of historic wild relative introgressions in shaping the adaptive landscape of the wheat genome

text: leaf

text: :Aotea


characteristic: SRA accession

text: LANDRACE

characteristic: collected by

text: bread wheat

text: CHINA 4

text: exome sequences of ExomeCapture-WATKINS-007220 - .

text: 2 week old

characteristic: dev stage

text: spring wheat

text: China

characteristic: isolate

text: Australian Winter Cereals Collection (AWCC)

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


text: CULTIVATED

text: bread wheat

characteristic: common name

text: exome sequences of ExomeCapture-DAS5-000074 - BC1F4 selection

text: 2 week old

text: spring wheat

characteristic: ecotype

text: Australia

text: AVS

characteristic: lab host

text: Triticum aestivum subsp. aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf

text: Aus30265 = FALCIE.SQUARROSA (389)


text: bread wheat

text: Hidhab

text: exome sequences of ExomeCapture-WSC-5-14 - .

text: 2 week old

text: spring wheat

text: Algeria

text: Hidhab

text: by Eduard Akhunov

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: subsp. aestivum

characteristic: sub species

characteristic: submission description

characteristic: submission identifier

text: leaf


text: COLLECTED Egypt by Ministry of Agriculture

text: bread wheat

text: Mokhtar

text: exome sequences of ExomeCapture-PI-220431 - .

text: 2 week old

text: spring wheat

text: Egypt

text: PI 220431

text: by Eduard Akhunov

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission title

text: leaf

characteristic: tissue type

text: :Mokhtar

characteristic: variety


text: CULTIVATED

text: bread wheat

text: PETIRROJO

characteristic: cultivar

text: exome sequences of ExomeCapture-DAS5-002852 - .

characteristic: description

text: 2 week old

text: spring wheat

text: Uruguay

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


characteristic: SRA accession

text: Tezanos Pintos Precoz//IRN46/Ciano 67/3/Pesterboden/4/Nacozari 76

characteristic: ancestory

text: DEVELOPED 1984 California, United States by Sogetal, Inc.

text: bread wheat

text: Hipro

text: exome sequences of ExomeCapture-DAS5-001463 - .

text: 2 week old

text: spring wheat

text: USA

characteristic: geographic location (country and/or sea)

text: PI 601074

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: The exome sequenced hexaploid wheat accessions were selected from a worldwide population of landraces and cultivars obtained from the USDA National Small Grains Collection and the Australian Grains Genebank (formally the Australian Winter Cereal Collection). The worldwide population comprised 3990 accessions from 106 countries that were genotyped using the Infinium iSelect 90K SNP wheat bead chip array40. The MCG method41 was used to select accessions for exome sequencing. This method uses a genetic relationship matrix calculated from genotype data to iteratively chose and arbitrary number of accessions (in the case of this study 20% of the accessions) that collectively explain the largest proportion of variance in genetic relationships among the whole set. Genomic DNA was extracted from leaf tissue for each accession using the Agencourt DNAdvance Genomic DNA Isolation Kit (Beckman Coulter) and subjected to sequence capture using the NimbleGen SeqCap EZ wheat whole genome assay12. In brief, 1 µg of DNA was fragmented with the Covaris S2 instrument to obtain an average fragment length of 300 bp. Shorter fragments were removed using Agencourt AMPure XP beads (Beckman Coulter). The KAPA Library Preparation Kit (Kapa Biosystems) and adapters supplied in the NimbleGen SeqCap EZ Reagent Kit Plus v2 (Roche) were used to prepare sample libraries for the capture assay, according to the KAPA protocol but excluding steps 8.1-8.22. The quality and yield of each sample library was assessed using an Agilent 2200 TapeStation (Agilent Technologies) before proceeding to the sequence capture assay following the Roche protocol. Each target capture sequence enriched sample library was sequenced on an Illumina HiSeq2000 instrument (Illumina) to generate about 30 million reads per accession.

text: leaf


text: COLLECTED Tirol, Austria by Mayr, E., Lehranstalt fur Pflanzenzucht und Samenprufung. DONATED 06/16/1970 by Popow, G., Swiss Federal Research Sta. for Agronomy

characteristic: collected by

text: bread wheat

text: exome sequences of ExomeCapture-DAS5-003342 - .

text: 2 week old

characteristic: dev stage

text: spring wheat

text: Austria

text: PI 350765

characteristic: isolate

characteristic: lat lon

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


text: CULTIVATED

text: bread wheat

characteristic: common name

text: exome sequences of ExomeCapture-WATKINS-007650 - .

text: 2 week old

text: Canada

characteristic: lab host

text: Triticum aestivum subsp. aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


text: bread wheat

text: exome sequences of ExomeCapture-DAS5-003343 - .

text: 2 week old

text: spring wheat

characteristic: ecotype

text: Austria

text: PI 350766

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: subsp. aestivum

characteristic: sub species

characteristic: submission description

text: leaf


text: CULTIVATED

text: pasta wheat

text: NOVOMICURINKA

text: exome sequences of ExomeCapture-DAS5-002799 - .

text: 2 week old

text: Russia

text: Triticum turgidum subsp. durum

text: Triticum turgidum subsp. durum

text: subsp. durum

characteristic: submission identifier

characteristic: submission title

text: leaf

characteristic: tissue type

characteristic: variety


characteristic: SRA accession

text: selection from Victor V

characteristic: ancestory

text: DEVELOPED Indiana, United States by Shaner, G., Purdue University; Buechley, G., Purdue University

text: bread wheat

text: SSL 87-88

characteristic: cultivar

text: exome sequences of ExomeCapture-DAS5-001872 - Resistant to Fusarium Head Blight (Scab). Contains Type II resistance - resistance to spread. Point reaction = 3.

characteristic: description

text: 2 week old

text: spring wheat

text: USA

text: PI 641760

text: USDA Germplasm Resources Information Network

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: Exome sequencing reveals the role of historic wild relative introgressions in shaping the adaptive landscape of the wheat genome

text: leaf

text: :SSL 87-88;USA126:NSGC 17674


text: COLLECTED 04/22/1987 Oman by Guarino, L., International Plant Genetic Resources Institute

characteristic: collected by

text: bread wheat

text: Mufsegha

text: exome sequences of ExomeCapture-DAS5-001657 - Sown November, harvested April. Irrigated. Used for food.

text: 2 week old

characteristic: dev stage

text: spring wheat

text: Romania

characteristic: geographic location (country and/or sea)

text: PI 532255

characteristic: isolate

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


text: CULTIVATED

text: pasta wheat

characteristic: common name

text: HARKOVSKAJA 46

text: exome sequences of ExomeCapture-DAS5-002449 - .

text: 2 week old

text: Russia

text: Australian Winter Cereals Collection (AWCC)

characteristic: lab host

text: Triticum turgidum subsp. durum

characteristic: organism

text: Triticum turgidum subsp. durum

text: subsp. durum

text: leaf


text: DONATED 01/01/1987 Oregon, United States by Metzger, R., USDA, ARS

text: wheat

text: exome sequences of ExomeCapture-DAS5-004431 - Resistant to bunt (Tilletia ssp.).

text: 2 week old

text: winter wheat

characteristic: ecotype

text: USA

text: PI 542466

text: Triticum aestivum subsp. macha

text: Triticum aestivum subsp. macha

characteristic: scientific name

text: subsp. macha

characteristic: sub species

text: leaf


text: COLLECTED PRE 1930 Portugal by Watkins, A., University of Cambridge. DONATED 01/11/1962 by Dept. of Scientific & Industrial Res.

text: bread wheat

text: Barbela Grosso

text: exome sequences of ExomeCapture-DAS5-004676 - .

text: 2 week old

text: spring wheat

text: Portugal

text: PI 278405

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission description

characteristic: submission identifier

characteristic: submission title

text: leaf

text: :Barbela Grosso;:Portugal 119


characteristic: SRA accession

text: COLLECTED 07/05/1985 Morocco by Guarino, L., International Plant Genetic Resources Institute

text: bread wheat

text: exome sequences of ExomeCapture-DAS5-003838 - .

text: 2 week old

text: spring wheat

text: Morocco

text: PI 525440

characteristic: lat lon

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: The exome sequenced hexaploid wheat accessions were selected from a worldwide population of landraces and cultivars obtained from the USDA National Small Grains Collection and the Australian Grains Genebank (formally the Australian Winter Cereal Collection). The worldwide population comprised 3990 accessions from 106 countries that were genotyped using the Infinium iSelect 90K SNP wheat bead chip array40. The MCG method41 was used to select accessions for exome sequencing. This method uses a genetic relationship matrix calculated from genotype data to iteratively chose and arbitrary number of accessions (in the case of this study 20% of the accessions) that collectively explain the largest proportion of variance in genetic relationships among the whole set. Genomic DNA was extracted from leaf tissue for each accession using the Agencourt DNAdvance Genomic DNA Isolation Kit (Beckman Coulter) and subjected to sequence capture using the NimbleGen SeqCap EZ wheat whole genome assay12. In brief, 1 µg of DNA was fragmented with the Covaris S2 instrument to obtain an average fragment length of 300 bp. Shorter fragments were removed using Agencourt AMPure XP beads (Beckman Coulter). The KAPA Library Preparation Kit (Kapa Biosystems) and adapters supplied in the NimbleGen SeqCap EZ Reagent Kit Plus v2 (Roche) were used to prepare sample libraries for the capture assay, according to the KAPA protocol but excluding steps 8.1-8.22. The quality and yield of each sample library was assessed using an Agilent 2200 TapeStation (Agilent Technologies) before proceeding to the sequence capture assay following the Roche protocol. Each target capture sequence enriched sample library was sequenced on an Illumina HiSeq2000 instrument (Illumina) to generate about 30 million reads per accession.

text: leaf

characteristic: tissue type

characteristic: variety


text: COLLECTED Guatemala by Servicio Cooperativo Inter-Americano de Agricultura

characteristic: collected by

text: bread wheat

text: Criollo Santa Irene

characteristic: cultivar

text: exome sequences of ExomeCapture-WSC-8-3 - .

characteristic: description

text: 2 week old

text: spring wheat

text: Guatemala

text: PI 245368

text: by Eduard Akhunov

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf

text: :Criollo Santa Irene


text: LANDRACE

text: bread wheat

text: CANARY 2

text: exome sequences of ExomeCapture-WATKINS-007188 - .

text: 2 week old

characteristic: dev stage

text: spring wheat

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: isolate

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


text: COLLECTED Iraq by Inspector General of Agriculture

text: bread wheat

characteristic: common name

text: exome sequences of ExomeCapture-DAS5-003690 - .

text: 2 week old

text: spring wheat

text: Iraq

text: PI 70695

characteristic: lab host

text: Triticum aestivum subsp. aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf

text: :76;:CItr 9038;:CI 9038


text: CULTIVATED

text: bread wheat

text: KLEIN 63

text: exome sequences of ExomeCapture-DAS5-002550 - .

text: 2 week old

text: Argentina

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: subsp. aestivum

characteristic: sub species

text: Exome sequencing reveals the role of historic wild relative introgressions in shaping the adaptive landscape of the wheat genome

text: leaf


characteristic: ancestory

text: CULTIVATED

text: bread wheat

text: exome sequences of ExomeCapture-DAS5-000430 - BC1F4 selection

text: 2 week old

text: spring wheat

characteristic: ecotype

text: Australia

text: AVS

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission description

characteristic: submission identifier

text: leaf

text: Aus34270 = GARZA/BOY//AE.SQUARROSA (286)


characteristic: SRA accession

text: CULTIVATED

text: pasta wheat

text: KORALL

text: exome sequences of ExomeCapture-DAS5-002610 - .

text: 2 week old

text: Russia

text: Australian Winter Cereals Collection (AWCC)

text: Triticum turgidum subsp. durum

text: Triticum turgidum subsp. durum

text: subsp. durum

characteristic: submission title

text: leaf

characteristic: tissue type


text: CULTIVATED

characteristic: collected by

text: bread wheat

text: CRONOX

characteristic: cultivar

text: exome sequences of ExomeCapture-DAS5-002255 - .

text: 2 week old

text: Argentina

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf

characteristic: variety


text: CULTIVATED

text: pasta wheat

text: SHIRVAN

text: exome sequences of ExomeCapture-DAS5-003041 - Brown

characteristic: description

text: 2 week old

characteristic: dev stage

text: spring wheat

text: Azerbaijan

characteristic: geographic location (country and/or sea)

text: Triticum turgidum subsp. durum

text: Triticum turgidum subsp. durum

text: subsp. durum

text: leaf


text: COLLECTED Goias, Brazil by U.S. Embassy

text: bread wheat

characteristic: common name

text: Goiana

text: exome sequences of ExomeCapture-WSC-8-9 - .

text: 2 week old

text: spring wheat

text: Brazil

text: PI 153785

characteristic: isolate

text: by Eduard Akhunov

characteristic: lab host

characteristic: lat lon

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf

text: :Goiana


text: COLLECTED 11/02/1981 Darfur, Sudan by Croston, R., IBPGR; El Ahmadi, A., Plant Breeding Section

text: bread wheat

text: exome sequences of ExomeCapture-DAS5-004027 - Local original source. Sown August, harvested November. Heads awned and awnless with white and brown glumes. Brown type less than 1 percent.

text: 2 week old

text: spring wheat

text: Sudan

text: PI 481916

text: USDA Germplasm Resources Information Network

text: Triticum aestivum subsp. aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: subsp. aestivum

characteristic: sub species

text: leaf


text: COLLECTED Angola by. DONATED 09/28/1950 by Estacao de Melhoramento de Plantas

text: bread wheat

text: Cana Roxa

text: exome sequences of ExomeCapture-WSC-8-8 - .

text: 2 week old

text: spring wheat

characteristic: ecotype

text: Angola

text: PI 192001

text: by Eduard Akhunov

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: The exome sequenced hexaploid wheat accessions were selected from a worldwide population of landraces and cultivars obtained from the USDA National Small Grains Collection and the Australian Grains Genebank (formally the Australian Winter Cereal Collection). The worldwide population comprised 3990 accessions from 106 countries that were genotyped using the Infinium iSelect 90K SNP wheat bead chip array40. The MCG method41 was used to select accessions for exome sequencing. This method uses a genetic relationship matrix calculated from genotype data to iteratively chose and arbitrary number of accessions (in the case of this study 20% of the accessions) that collectively explain the largest proportion of variance in genetic relationships among the whole set. Genomic DNA was extracted from leaf tissue for each accession using the Agencourt DNAdvance Genomic DNA Isolation Kit (Beckman Coulter) and subjected to sequence capture using the NimbleGen SeqCap EZ wheat whole genome assay12. In brief, 1 µg of DNA was fragmented with the Covaris S2 instrument to obtain an average fragment length of 300 bp. Shorter fragments were removed using Agencourt AMPure XP beads (Beckman Coulter). The KAPA Library Preparation Kit (Kapa Biosystems) and adapters supplied in the NimbleGen SeqCap EZ Reagent Kit Plus v2 (Roche) were used to prepare sample libraries for the capture assay, according to the KAPA protocol but excluding steps 8.1-8.22. The quality and yield of each sample library was assessed using an Agilent 2200 TapeStation (Agilent Technologies) before proceeding to the sequence capture assay following the Roche protocol. Each target capture sequence enriched sample library was sequenced on an Illumina HiSeq2000 instrument (Illumina) to generate about 30 million reads per accession.

characteristic: submission description

characteristic: submission identifier

text: leaf

text: :Cana Roxa;:3402


characteristic: SRA accession

text: COLLECTED 1956 Splitsko-dalmatinska, Croatia by Symon, D., Adelaide University

text: bread wheat

text: exome sequences of ExomeCapture-DAS5-003478 - .

text: 2 week old

text: spring wheat

text: Croatia

text: PI 264959

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission title

text: leaf

characteristic: tissue type


text: CULTIVATED

characteristic: collected by

text: pasta wheat

text: MICHURINKA

characteristic: cultivar

text: exome sequences of ExomeCapture-DAS5-002740 - .

text: 2 week old

text: Russia

text: Triticum turgidum subsp. durum

text: Triticum turgidum subsp. durum

text: subsp. durum

text: leaf

characteristic: variety


characteristic: ancestory

text: CULTIVATED

text: bread wheat

text: exome sequences of ExomeCapture-DAS5-000627 - BC2F6 selection

characteristic: description

text: 2 week old

characteristic: dev stage

text: spring wheat

text: Australia

characteristic: geographic location (country and/or sea)

text: AVS

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: Exome sequencing reveals the role of historic wild relative introgressions in shaping the adaptive landscape of the wheat genome

text: leaf

text: Aus29638 = ARLIN_1/AE.SQUARROSA (218)


text: COLLECTED 1972 Macedonia by Institute for Small Grains

text: bread wheat

characteristic: common name

text: exome sequences of ExomeCapture-DAS5-004268 - .

text: 2 week old

text: spring wheat

text: Macedonia

text: PI 378381

characteristic: isolate

characteristic: lab host

characteristic: lat lon

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


text: COLLECTED 05/13/1985 Essaouira, Morocco by Guarino, L., International Plant Genetic Resources Institute

text: bread wheat

text: exome sequences of ExomeCapture-DAS5-003835 - Awnless

text: 2 week old

text: spring wheat

characteristic: ecotype

text: Morocco

text: PI 525282

text: Triticum aestivum subsp. aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: subsp. aestivum

characteristic: sub species

text: leaf


characteristic: SRA accession

text: CULTIVATED

text: bread wheat

text: JANG KWANG

text: exome sequences of ExomeCapture-DAS5-002505 - .

text: 2 week old

text: South Korea

text: Australian Winter Cereals Collection (AWCC)

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission description

characteristic: submission identifier

characteristic: submission title

text: leaf


text: LANDRACE

characteristic: collected by

text: bread wheat

text: ARMENIA W94373

characteristic: cultivar

text: exome sequences of ExomeCapture-WATKINS-007789 - .

text: 2 week old

text: spring wheat

text: Russia

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf

characteristic: tissue type

characteristic: variety


text: CULTIVATED

text: bread wheat

text: HANSEN'S 131

text: exome sequences of ExomeCapture-DAS5-002447 - .

characteristic: description

text: 2 week old

characteristic: dev stage

text: F

text: Russia

characteristic: geographic location (country and/or sea)

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


text: LANDRACE

text: bread wheat

characteristic: common name

text: CHINA Sh211

text: exome sequences of ExomeCapture-WATKINS-007248 - .

text: 2 week old

text: spring wheat

text: China

characteristic: isolate

characteristic: lab host

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


text: LANDRACE

text: wheat

text: CYPRUS KYPEROUNDA

text: exome sequences of ExomeCapture-WATKINS-007826 - .

text: 2 week old

text: spring wheat

characteristic: ecotype

text: Cyprus

text: Triticum aestivum subsp. compactum

characteristic: organism

text: Triticum aestivum subsp. compactum

text: subsp. compactum

text: leaf


text: CULTIVATED

text: bread wheat

text: BJELOKOLOOKA NO 2999

text: exome sequences of ExomeCapture-DAS5-002144

text: 2 week old

text: Russia

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: subsp. aestivum

characteristic: sub species

text: leaf


characteristic: SRA accession

text: CULTIVATED

text: bread wheat

text: WHIT

text: exome sequences of ExomeCapture-DAS5-003234 - Soft / White

text: 2 week old

text: spring wheat

text: USA

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: The exome sequenced hexaploid wheat accessions were selected from a worldwide population of landraces and cultivars obtained from the USDA National Small Grains Collection and the Australian Grains Genebank (formally the Australian Winter Cereal Collection). The worldwide population comprised 3990 accessions from 106 countries that were genotyped using the Infinium iSelect 90K SNP wheat bead chip array40. The MCG method41 was used to select accessions for exome sequencing. This method uses a genetic relationship matrix calculated from genotype data to iteratively chose and arbitrary number of accessions (in the case of this study 20% of the accessions) that collectively explain the largest proportion of variance in genetic relationships among the whole set. Genomic DNA was extracted from leaf tissue for each accession using the Agencourt DNAdvance Genomic DNA Isolation Kit (Beckman Coulter) and subjected to sequence capture using the NimbleGen SeqCap EZ wheat whole genome assay12. In brief, 1 µg of DNA was fragmented with the Covaris S2 instrument to obtain an average fragment length of 300 bp. Shorter fragments were removed using Agencourt AMPure XP beads (Beckman Coulter). The KAPA Library Preparation Kit (Kapa Biosystems) and adapters supplied in the NimbleGen SeqCap EZ Reagent Kit Plus v2 (Roche) were used to prepare sample libraries for the capture assay, according to the KAPA protocol but excluding steps 8.1-8.22. The quality and yield of each sample library was assessed using an Agilent 2200 TapeStation (Agilent Technologies) before proceeding to the sequence capture assay following the Roche protocol. Each target capture sequence enriched sample library was sequenced on an Illumina HiSeq2000 instrument (Illumina) to generate about 30 million reads per accession.

characteristic: submission description

text: leaf


text: DEVELOPED Tolbukhin, Bulgaria by Institute for Wheat & Sunflower Research

text: bread wheat

text: exome sequences of ExomeCapture-DAS5-003423 - .

text: 2 week old

text: spring wheat

text: Bulgaria

text: PI 564363

text: USDA Germplasm Resources Information Network

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission identifier

characteristic: submission title

text: leaf


text: LANDRACE

characteristic: collected by

text: bread wheat

text: CROATIA 9

characteristic: cultivar

text: exome sequences of ExomeCapture-WATKINS-007295 - .

text: 2 week old

text: spring wheat

text: not provided

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: Exome sequencing reveals the role of historic wild relative introgressions in shaping the adaptive landscape of the wheat genome

text: leaf


characteristic: ancestory

text: CULTIVATED

text: bread wheat

text: exome sequences of ExomeCapture-DAS5-000518 - BC1F4 selection

text: 2 week old

text: spring wheat

text: Australia

text: AVS

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf

characteristic: tissue type

text: Aus34442 = CETA/AE.SQUARROSA (783)

characteristic: variety


text: CULTIVATED

text: pasta wheat

text: RUSSIAN 4

text: exome sequences of ExomeCapture-DAS5-002986 - .

characteristic: description

text: 2 week old

characteristic: dev stage

text: Russia

characteristic: geographic location (country and/or sea)

text: Triticum turgidum subsp. durum

text: Triticum turgidum subsp. durum

text: subsp. durum

text: leaf


text: CULTIVATED

text: bread wheat

characteristic: common name

text: exome sequences of ExomeCapture-DAS5-000265 - BC1F4 selection

text: 2 week old

text: spring wheat

text: Australia

characteristic: isolate

text: AVS

characteristic: lab host

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf

text: Aus30656 = LCK59.61/AE.SQUARROSA (783)


text: CULTIVATED

text: bread wheat

text: exome sequences of ExomeCapture-DAS5-000563 - BC1F4 selection

text: 2 week old

text: spring wheat

characteristic: ecotype

text: Australia

text: AVS

text: Triticum aestivum subsp. aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: subsp. aestivum

text: leaf

text: Aus36181 = CETA/AE.SQUARROSA (386)


characteristic: SRA accession

text: Warigo/Sterling

text: DEVELOPED Rift Valley, Kenya by Plant Breeding Station

text: bread wheat

text: Kenya Cheetah

text: exome sequences of ExomeCapture-DAS5-001548 - .

text: 2 week old

text: spring wheat

text: Kenya

text: PI 323399

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: sub species

characteristic: submission description

text: leaf

text: :Kenya Cheetah


text: COLLECTED 06/16/1979 Rapti, Nepal by Erskine, W., IBPGR, FAO; Shrestha, P., IBPGR; Bourgois, J., IBPGR

characteristic: collected by

text: bread wheat

text: exome sequences of ExomeCapture-DAS5-004405 - Awnless. Seeds plump, red.

text: 2 week old

text: winter wheat

text: Nepal

text: PI 445764

characteristic: lat lon

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission identifier

characteristic: submission title

text: leaf

text: :207;:FAO 51.905


text: CULTIVATED

text: pasta wheat

text: NORDGAU

characteristic: cultivar

text: exome sequences of ExomeCapture-DAS5-002790 - .

text: 2 week old

text: spring wheat

text: Germany

text: Australian Winter Cereals Collection (AWCC)

text: Triticum turgidum subsp. durum

text: Triticum turgidum subsp. durum

text: subsp. durum

text: leaf

characteristic: tissue type

characteristic: variety


text: LANDRACE

text: bread wheat

text: SMYRNA 11

text: exome sequences of ExomeCapture-WATKINS-007030 - .

characteristic: description

text: 2 week old

characteristic: dev stage

text: spring wheat

text: Turkey

characteristic: geographic location (country and/or sea)

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


text: CULTIVATED

text: bread wheat

characteristic: common name

text: WESTBRED 906

text: exome sequences of ExomeCapture-DAS5-003231 - Red

text: 2 week old

text: spring wheat

text: USA

characteristic: isolate

characteristic: lab host

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: The exome sequenced hexaploid wheat accessions were selected from a worldwide population of landraces and cultivars obtained from the USDA National Small Grains Collection and the Australian Grains Genebank (formally the Australian Winter Cereal Collection). The worldwide population comprised 3990 accessions from 106 countries that were genotyped using the Infinium iSelect 90K SNP wheat bead chip array40. The MCG method41 was used to select accessions for exome sequencing. This method uses a genetic relationship matrix calculated from genotype data to iteratively chose and arbitrary number of accessions (in the case of this study 20% of the accessions) that collectively explain the largest proportion of variance in genetic relationships among the whole set. Genomic DNA was extracted from leaf tissue for each accession using the Agencourt DNAdvance Genomic DNA Isolation Kit (Beckman Coulter) and subjected to sequence capture using the NimbleGen SeqCap EZ wheat whole genome assay12. In brief, 1 µg of DNA was fragmented with the Covaris S2 instrument to obtain an average fragment length of 300 bp. Shorter fragments were removed using Agencourt AMPure XP beads (Beckman Coulter). The KAPA Library Preparation Kit (Kapa Biosystems) and adapters supplied in the NimbleGen SeqCap EZ Reagent Kit Plus v2 (Roche) were used to prepare sample libraries for the capture assay, according to the KAPA protocol but excluding steps 8.1-8.22. The quality and yield of each sample library was assessed using an Agilent 2200 TapeStation (Agilent Technologies) before proceeding to the sequence capture assay following the Roche protocol. Each target capture sequence enriched sample library was sequenced on an Illumina HiSeq2000 instrument (Illumina) to generate about 30 million reads per accession.

text: leaf


text: LANDRACE

text: bread wheat

text: CHINESE 8 4

text: exome sequences of ExomeCapture-WATKINS-007276 - .

text: 2 week old

text: spring wheat

characteristic: ecotype

text: China

text: Triticum aestivum subsp. aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: subsp. aestivum

text: leaf


characteristic: SRA accession

text: DEVELOPED Croatia by Inst. for Plant Breeding and Production

text: bread wheat

text: exome sequences of ExomeCapture-DAS5-003477 - Branched-type spikes. Branched, red awnless heads.

text: 2 week old

text: spring wheat

text: Croatia

text: PI 358333

text: USDA Germplasm Resources Information Network

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: sub species

characteristic: submission description

text: leaf


characteristic: ancestory

text: CULTIVATED

characteristic: collected by

text: bread wheat

text: exome sequences of ExomeCapture-DAS5-000264 - BC1F4 selection

text: 2 week old

text: spring wheat

text: Australia

text: AVS

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission identifier

text: Exome sequencing reveals the role of historic wild relative introgressions in shaping the adaptive landscape of the wheat genome

text: leaf

text: Aus30656 = LCK59.61/AE.SQUARROSA (783)


text: CULTIVATED

text: pasta wheat

text: ERTHROMELAN

characteristic: cultivar

text: exome sequences of ExomeCapture-DAS5-002338 - .

text: 2 week old

text: Poland

text: Triticum turgidum subsp. durum

text: Triticum turgidum subsp. durum

text: subsp. durum

characteristic: submission title

text: leaf

characteristic: tissue type


text: LANDRACE

text: bread wheat

text: VARNA 7

text: exome sequences of ExomeCapture-WATKINS-007769 - .

characteristic: description

text: 2 week old

characteristic: dev stage

text: spring wheat

text: Bulgaria

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf

characteristic: variety


text: LANDRACE

text: bread wheat

characteristic: common name

text: SMYRNA 17

text: exome sequences of ExomeCapture-WATKINS-007033 - .

text: 2 week old

text: spring wheat

text: Turkey

characteristic: geographic location (country and/or sea)

characteristic: isolate

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


text: COLLECTED Iran by

text: dinkel wheat

text: exome sequences of ExomeCapture-DAS5-003669 - .

text: 2 week old

text: spring wheat

characteristic: ecotype

text: Iran

text: PI 225271

characteristic: lab host

text: Triticum aestivum subsp. spelta

characteristic: organism

text: Triticum aestivum subsp. spelta

text: subsp. spelta

text: leaf


characteristic: SRA accession

text: COLLECTED Japan by. DONATED 01/06/1963 by Instytut Hodowli I Aklimatyzacji Roslin

text: bread wheat

text: Akakkowa Aka

text: exome sequences of ExomeCapture-DAS5-003729 - .

text: 2 week old

text: spring wheat

text: Japan

text: PI 285896

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: subsp. aestivum

characteristic: sub species

text: leaf

text: :Akakkowa Aka


text: COLLECTED Burundi by Ingold, M., Federal Agricultural Research Station

characteristic: collected by

text: bread wheat

text: exome sequences of ExomeCapture-DAS5-003428 - .

text: 2 week old

text: spring wheat

text: Burundi

text: PI 351875

text: Triticum aestivum subsp. aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission description

text: leaf