characteristic: SRA accession

text: Armenia by. DONATED 01/25/1972 by N.I. Vavilov Institute of Plant Industry

text: wheat

text: Vardenik 9

text: USDA GRIN

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-001950 - Accession Name = 'Vardenik 9'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Artashati 42/landrace Erinatseum'

text: 2 week old

text: spring wheat

characteristic: ecotype

text: Armenia

text: PI 372151

text: Triticum compactum

text: Triticum aestivum subsp. compactum

text: USDA GRIN:PI 372151

text: subsp. compactum

text: leaf

text: :Vardenik 9;:WIR 44280


status: PUBLIC

text: bread wheat

characteristic: common name

text: POLAND 5

characteristic: cultivar

text: AWCC

text: exome sequences of ExomeCapture-DAS5-002876 - Accession Name = 'POLAND 5'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

characteristic: description

text: 2 week old

characteristic: dev stage

text: Poland

characteristic: geographic location (country and/or sea)

characteristic: material

text: Triticum aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

characteristic: specimen voucher

text: subsp. aestivum

characteristic: sub species

text: The exome sequenced hexaploid wheat accessions were selected from a worldwide population of landraces and cultivars obtained from the USDA National Small Grains Collection and the Australian Grains Genebank (formally the Australian Winter Cereal Collection). The worldwide population comprised 3990 accessions from 106 countries that were genotyped using the Infinium iSelect 90K SNP wheat bead chip array. The MCG method was used to select accessions for exome sequencing. This method uses a genetic relationship matrix calculated from genotype data to iteratively chose and arbitrary number of accessions (in the case of this study 20% of the accessions) that collectively explain the largest proportion of variance in genetic relationships among the whole set. Genomic DNA was extracted from leaf tissue for each accession using the Agencourt DNAdvance Genomic DNA Isolation Kit (Beckman Coulter) and subjected to sequence capture using the NimbleGen SeqCap EZ wheat whole genome assay. In brief, 1 µg of DNA was fragmented with the Covaris S2 instrument to obtain an average fragment length of 300 bp. Shorter fragments were removed using Agencourt AMPure XP beads (Beckman Coulter). The KAPA Library Preparation Kit (Kapa Biosystems) and adapters supplied in the NimbleGen SeqCap EZ Reagent Kit Plus v2 (Roche) were used to prepare sample libraries for the capture assay, according to the KAPA protocol but excluding steps 8.1-8.22. The quality and yield of each sample library was assessed using an Agilent 2200 TapeStation (Agilent Technologies) before proceeding to the sequence capture assay following the Roche protocol. Each target capture sequence enriched sample library was sequenced on an Illumina HiSeq2000 instrument (Illumina) to generate about 30 million reads per accession. The project leaders are Matthew Hayden (Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, Victoria, Australia; La Trobe University, Bundoora, Victoria, Australia) and Eduard Akhunov (Kansas State University, USA). More information can be found on our project website at http://wheatgenomics.plantpath.ksu.edu/1000EC

characteristic: submission description

characteristic: submission identifier

text: Exome sequencing of diverse collection of wheat landraces, cultivars and breeding lines

characteristic: submission title

text: leaf

characteristic: tissue type

characteristic: variety

type: has member

Eduard Akhunov

Address: 1712 Claflin Road, Department of Plant Pathology, Kansas State University, Manhattan, KS 66506, USA

Fei He

FirstName: Fei

LastName: He


characteristic: SRA accession

text: bread wheat

text: AWCC

characteristic: culture collection

text: exome sequences of ExomeCapture-WATKINS-007801 - Accession Name = 'Aus28769'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: not provided

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


text: 06/16/1979 Rapti, Nepal by Erskine, W., IBPGR, FAO; Shrestha, P., IBPGR; Bourgois, J., IBPGR

characteristic: collected by

text: bread wheat

characteristic: common name

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-004405 - Accession Name = '207'; Remarks = 'Awnless. Seeds plump, red.'; Released = '.'; Lattitude,Longitude,Elevation = '28.58333333,82.8,2200'; Ancestry = '.'

text: 2 week old

text: winter wheat

characteristic: ecotype

text: Nepal

text: Rapti;Taka, Rukum, Rapati

characteristic: geographic location (region and locality)

characteristic: lat lon

text: PI 445764

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 445764

text: subsp. aestivum

text: leaf

text: :207;:FAO 51.905


text: Ocotepeque, Honduras by Norvell, O., Carnegie Institution

text: bread wheat

characteristic: cultivar

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-001079 - Accession Name = '3418'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '14.5,-89,.'; Ancestry = '.'

characteristic: description

text: 2 week old

characteristic: dev stage

text: spring wheat

text: Honduras

characteristic: geographic location (country and/or sea)

text: PI 200762

characteristic: material

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 200762

text: subsp. aestivum

text: leaf


text: bread wheat

text: EKA NOWA

text: AWCC

text: exome sequences of ExomeCapture-DAS5-002330 - Accession Name = 'EKA NOWA'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: Poland

text: Triticum aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

characteristic: specimen voucher

text: subsp. aestivum

characteristic: sub species

characteristic: submission description

text: leaf


characteristic: SRA accession

text: bread wheat

text: AVS

text: exome sequences of ExomeCapture-DAS5-000215 - Accession Name = 'Aus30300/annuello*31'; Remarks = 'BC1F4 selection'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Aus30300/annuello'

text: 2 week old

text: spring wheat

text: Australia

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission identifier

characteristic: submission title

text: leaf

characteristic: tissue type

text: Aus30300 = DOY1/AE.SQUARROSA (1027)

characteristic: variety


text: Zambia by Mount Makulu Research Station; Pope, W., University of Idaho

characteristic: collected by

text: bread wheat

characteristic: common name

text: Idaho 1877 NR BJ

text: USDA GRIN

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-001488 - Accession Name = 'Idaho 1877 NR BJ'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'T. timopheevii/3*T. vulgare//2*Idead'

text: 2 week old

text: spring wheat

characteristic: ecotype

text: Zambia

text: PI 234237

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 234237

text: subsp. aestivum

text: leaf

text: :Idaho 1877 NR BJ


text: Portugal by. DONATED 09/28/1950 by Estacao de Melhoramento de Plantas

text: bread wheat

text: Gaspino

characteristic: cultivar

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-001415 - Accession Name = 'Gaspino'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

characteristic: description

text: 2 week old

characteristic: dev stage

text: spring wheat

text: Portugal

text: PI 191731

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 191731

text: subsp. aestivum

text: leaf


text: 1908 Tashkent, Uzbekistan by Hansen, N., South Dakota Agricultural Experiment Station

text: bread wheat

text: Kara Bugdai

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-001540 - Accession Name = 'Kara Bugdai'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '41.33333333,69.3,473'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Uzbekistan

characteristic: geographic location (country and/or sea)

text: Tashkent;Tashkend, Turkestan

characteristic: geographic location (region and locality)

characteristic: lat lon

text: PI 24485

characteristic: material

text: Triticum aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 24485

text: subsp. aestivum

text: leaf

text: :Kara Bugdai;:129;:CI 3078;:AUS 6962;:CItr 3078;:NEH121908


characteristic: SRA accession

text: New South Wales, Australia by Wenholz, H., Department of Agriculture

text: bread wheat

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-003316 - Accession Name = '428'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Hope/Currawa/Dundee'

text: 2 week old

text: spring wheat

text: Australia

text: PI 117758

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: USDA GRIN:PI 117758

characteristic: specimen voucher

text: subsp. aestivum

characteristic: sub species

characteristic: submission description

text: leaf


text: Iran by Stewart, G., Utah Agric. Exp. Station

characteristic: collected by

text: bread wheat

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-003661 - Accession Name = '65o'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Iran

text: PI 207104

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 207104

text: subsp. aestivum

text: The exome sequenced hexaploid wheat accessions were selected from a worldwide population of landraces and cultivars obtained from the USDA National Small Grains Collection and the Australian Grains Genebank (formally the Australian Winter Cereal Collection). The worldwide population comprised 3990 accessions from 106 countries that were genotyped using the Infinium iSelect 90K SNP wheat bead chip array. The MCG method was used to select accessions for exome sequencing. This method uses a genetic relationship matrix calculated from genotype data to iteratively chose and arbitrary number of accessions (in the case of this study 20% of the accessions) that collectively explain the largest proportion of variance in genetic relationships among the whole set. Genomic DNA was extracted from leaf tissue for each accession using the Agencourt DNAdvance Genomic DNA Isolation Kit (Beckman Coulter) and subjected to sequence capture using the NimbleGen SeqCap EZ wheat whole genome assay. In brief, 1 µg of DNA was fragmented with the Covaris S2 instrument to obtain an average fragment length of 300 bp. Shorter fragments were removed using Agencourt AMPure XP beads (Beckman Coulter). The KAPA Library Preparation Kit (Kapa Biosystems) and adapters supplied in the NimbleGen SeqCap EZ Reagent Kit Plus v2 (Roche) were used to prepare sample libraries for the capture assay, according to the KAPA protocol but excluding steps 8.1-8.22. The quality and yield of each sample library was assessed using an Agilent 2200 TapeStation (Agilent Technologies) before proceeding to the sequence capture assay following the Roche protocol. Each target capture sequence enriched sample library was sequenced on an Illumina HiSeq2000 instrument (Illumina) to generate about 30 million reads per accession. The project leaders are Matthew Hayden (Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, Victoria, Australia; La Trobe University, Bundoora, Victoria, Australia) and Eduard Akhunov (Kansas State University, USA). More information can be found on our project website at http://wheatgenomics.plantpath.ksu.edu/1000EC

characteristic: submission identifier

text: Exome sequencing of diverse collection of wheat landraces, cultivars and breeding lines

characteristic: submission title

text: leaf

characteristic: tissue type

characteristic: variety


text: bread wheat

characteristic: common name

text: CAUCASUS W8528

characteristic: cultivar

text: AWCC

characteristic: culture collection

text: exome sequences of ExomeCapture-WATKINS-007192 - Accession Name = 'CAUCASUS W8528'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

characteristic: description

text: 2 week old

text: spring wheat

characteristic: ecotype

text: Russia

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


text: Gelderland, Netherlands by Wageningen Agricultural University

text: bread wheat

text: Chinese 166

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-001291 - Accession Name = 'Chinese 166'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '52,5.83333333,.'; Ancestry = '.'

text: 2 week old

characteristic: dev stage

text: spring wheat

text: Netherlands

characteristic: geographic location (country and/or sea)

characteristic: lat lon

text: PI 340684

characteristic: material

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 340684

text: subsp. aestivum

text: leaf

text: :Chinese 166


characteristic: SRA accession

text: bread wheat

text: GREECE 19

text: AWCC

text: exome sequences of ExomeCapture-WATKINS-007088 - Accession Name = 'GREECE 19'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Greece

text: KALAVRITA;KALAVRITA DISTRICT

characteristic: geographic location (region and locality)

text: Triticum aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

characteristic: specimen voucher

text: subsp. aestivum

text: leaf


text: bread wheat

text: TOKWE

text: AWCC

text: exome sequences of ExomeCapture-DAS5-003120 - Accession Name = 'TOKWE'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: South Africa

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: sub species

characteristic: submission description

characteristic: submission identifier

characteristic: submission title

text: leaf


text: Pakistan by Seed Exchange Office

characteristic: collected by

text: bread wheat

characteristic: common name

text: Local White

characteristic: cultivar

text: exome sequences of ExomeCapture-Cltr-15134 - Accession Name = 'Local White'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Pakistan

text: CItr 15134

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: CItr 15134

text: subsp. aestivum

text: leaf

characteristic: tissue type

text: :Local White;:FAO 25.171;:CI 15134

characteristic: variety


text: bread wheat

text: TOTA 63

text: AWCC

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-003123 - Accession Name = 'TOTA 63'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

characteristic: description

text: 2 week old

characteristic: dev stage

text: Colombia

characteristic: geographic location (country and/or sea)

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


characteristic: SRA accession

text: bread wheat

text: Frame

text: AWCC

text: exome sequences of ExomeCapture-DAS5-FRAME - Accession Name = 'Frame'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

characteristic: ecotype

text: Australia

characteristic: material

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


text: bread wheat

text: SPINKCOTA

text: AWCC

text: exome sequences of ExomeCapture-DAS5-003063 - Accession Name = 'SPINKCOTA'; Remarks = 'Hard / Red'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: USA

text: Triticum aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

characteristic: specimen voucher

text: subsp. aestivum

text: leaf


text: Rift Valley, Kenya by Plant Breeding Station. DONATED 09/28/1950 by Estacao de Melhoramento de Plantas

text: bread wheat

text: Equator KTI

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-001378 - Accession Name = 'Equator KTI'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Kenya

text: PI 191638

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 191638

text: subsp. aestivum

characteristic: sub species

characteristic: submission description

characteristic: submission identifier

text: leaf

text: :Equator KTI;:2978;:Kenya tipo 252


text: Tarragona, Spain by. DONATED 09/28/1950 by Estacion Experimental de Aula Dei

characteristic: collected by

text: bread wheat

characteristic: common name

text: Jeja de Conesa

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-004451 - Accession Name = 'Jeja de Conesa'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '41.51666667,1.3,728'; Ancestry = '.'

text: 2 week old

text: winter wheat

text: Spain

text: Tarragona;Conesa

characteristic: geographic location (region and locality)

characteristic: lat lon

text: PI 191240

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 191240

text: subsp. aestivum

characteristic: submission title

text: leaf

text: :Jeja de Conesa;:2436


text: bread wheat

text: INDIA 102

characteristic: cultivar

text: AWCC

characteristic: culture collection

text: exome sequences of ExomeCapture-WATKINS-007339 - Accession Name = 'INDIA 102'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

characteristic: description

text: 2 week old

text: spring wheat

text: India

text: KASHMIR;SRINAGAR, KASHMIR

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf

characteristic: tissue type

characteristic: variety


characteristic: SRA accession

text: bread wheat

text: AVS

text: exome sequences of ExomeCapture-DAS5-000263 - Accession Name = 'Aus30656/yitpi*28'; Remarks = 'BC1F4 selection'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Aus30656/yitpi'

text: 2 week old

characteristic: dev stage

text: spring wheat

characteristic: ecotype

text: Australia

characteristic: geographic location (country and/or sea)

characteristic: material

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf

text: Aus30656 = LCK59.61/AE.SQUARROSA (783)


text: Belarus by. DONATED 08/20/1993 by N.I. Vavilov Research Institute of Plant Industry

text: bread wheat

text: Al'borubrum B-21

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-004326 - Accession Name = 'Al'borubrum B-21'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'selection from landrace from Belarus '

text: 2 week old

text: winter wheat

text: Belarus

text: PI 572621

text: Triticum aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: USDA GRIN:PI 572621

characteristic: specimen voucher

text: subsp. aestivum

characteristic: sub species

text: The exome sequenced hexaploid wheat accessions were selected from a worldwide population of landraces and cultivars obtained from the USDA National Small Grains Collection and the Australian Grains Genebank (formally the Australian Winter Cereal Collection). The worldwide population comprised 3990 accessions from 106 countries that were genotyped using the Infinium iSelect 90K SNP wheat bead chip array. The MCG method was used to select accessions for exome sequencing. This method uses a genetic relationship matrix calculated from genotype data to iteratively chose and arbitrary number of accessions (in the case of this study 20% of the accessions) that collectively explain the largest proportion of variance in genetic relationships among the whole set. Genomic DNA was extracted from leaf tissue for each accession using the Agencourt DNAdvance Genomic DNA Isolation Kit (Beckman Coulter) and subjected to sequence capture using the NimbleGen SeqCap EZ wheat whole genome assay. In brief, 1 µg of DNA was fragmented with the Covaris S2 instrument to obtain an average fragment length of 300 bp. Shorter fragments were removed using Agencourt AMPure XP beads (Beckman Coulter). The KAPA Library Preparation Kit (Kapa Biosystems) and adapters supplied in the NimbleGen SeqCap EZ Reagent Kit Plus v2 (Roche) were used to prepare sample libraries for the capture assay, according to the KAPA protocol but excluding steps 8.1-8.22. The quality and yield of each sample library was assessed using an Agilent 2200 TapeStation (Agilent Technologies) before proceeding to the sequence capture assay following the Roche protocol. Each target capture sequence enriched sample library was sequenced on an Illumina HiSeq2000 instrument (Illumina) to generate about 30 million reads per accession. The project leaders are Matthew Hayden (Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, Victoria, Australia; La Trobe University, Bundoora, Victoria, Australia) and Eduard Akhunov (Kansas State University, USA). More information can be found on our project website at http://wheatgenomics.plantpath.ksu.edu/1000EC

characteristic: submission description

text: leaf

text: :Al'borubrum B-21;:WIR 35739;:NSGC 41


text: 1963 Poland by Wolski, T., Plant Breeders Danko

characteristic: collected by

text: bread wheat

characteristic: common name

text: C 517

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-003915 - Accession Name = 'C 517'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Poland

text: PI 338388

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 338388

text: subsp. aestivum

characteristic: submission identifier

text: Exome sequencing of diverse collection of wheat landraces, cultivars and breeding lines

text: leaf

text: :C 517


text: 1945 Nord, France by Florimond Despres. DONATED 08/30/1948 by Ellerton, S.

text: bread wheat

text: Nord Desprez

characteristic: cultivar

text: USDA GRIN

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-004512 - Accession Name = 'Nord Desprez'; Remarks = '.'; Released = '1945'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Vilmorin 27/Hybride du Joncquois'

text: 2 week old

text: winter wheat

text: France

text: PI 167419

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 167419

text: subsp. aestivum

characteristic: submission title

text: leaf

text: :Nord Desprez


text: bread wheat

text: AVS

text: exome sequences of ExomeCapture-DAS5-000150 - Accession Name = 'Aus30278/annuello*5'; Remarks = 'BC1F4 selection'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Aus30278/annuello'

characteristic: description

text: 2 week old

text: spring wheat

text: Australia

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf

characteristic: tissue type

text: Aus30278 = GAE.SQUARROSA (268)

characteristic: variety


characteristic: SRA accession

text: bread wheat

text: INDIA 207

text: AWCC

text: exome sequences of ExomeCapture-WATKINS-007800 - Accession Name = 'INDIA 207'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

characteristic: dev stage

text: spring wheat

characteristic: ecotype

text: India

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


text: 11/18/1929 Pyongan Nam, Korea, North by Dorsett, P., USDA-Bureau of Plant Industry; Morse, W., USDA - Bureau of Plant Industry

text: bread wheat

text: Poubiru

text: exome sequences of ExomeCapture-WSC-8-1 - Accession Name = 'Poubiru'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '39.5,126.4,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: North Korea

characteristic: geographic location (country and/or sea)

characteristic: lat lon

text: PI 82469

characteristic: material

text: Triticum aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

text: PI 82469

text: subsp. aestivum

text: leaf


text: Qostanay, Kazakhstan by. DONATED 01/1980 by N.I. Vavilov Institute of Plant Industry

text: bread wheat

text: Grekum 105

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-001436 - Accession Name = 'Grekum 105'; Remarks = 'Received as variety graecum.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Saratovskaya 29/Zolotaya-Volna '

text: 2 week old

text: spring wheat

text: Kazakhstan

text: PI 438962

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: USDA GRIN:PI 438962

characteristic: specimen voucher

text: subsp. aestivum

characteristic: sub species

characteristic: submission description

text: leaf

text: :Grekum 105;:Graecum 105;:WIR 48981


text: bread wheat

characteristic: common name

text: CAUCASUS W2397

characteristic: cultivar

text: AWCC

text: exome sequences of ExomeCapture-WATKINS-007191 - Accession Name = 'CAUCASUS W2397'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Russia

text: YEREVAN;mountains near YEREVAN

characteristic: geographic location (region and locality)

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission identifier

text: leaf


text: bread wheat

text: AVS

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-000887 - Accession Name = 'Aus29651/2*Annuello*7'; Remarks = 'BC2F6 selection'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Aus29651/2*Annuello'

characteristic: description

text: 2 week old

text: spring wheat

text: Australia

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission title

text: leaf

characteristic: tissue type

text: Aus29651 = YAV79//DACK/RABI/3/SNIPE/4/AE.SQUARROSA (477)


characteristic: SRA accession

text: bread wheat

text: Dorziyeh Karak

text: exome sequences of ExomeCapture-PI-283147 - Accession Name = 'Dorziyeh Karak'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

characteristic: dev stage

text: spring wheat

characteristic: ecotype

text: Jordan

text: PI 283147

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: PI 283147

text: subsp. aestivum

text: leaf


text: Iran by

characteristic: collected by

text: dinkel wheat

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-003669 - Accession Name = '85'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Iran

characteristic: geographic location (country and/or sea)

text: PI 225271

characteristic: material

text: Triticum spelta

text: Triticum aestivum subsp. spelta

text: USDA GRIN:PI 225271

text: subsp. spelta

text: leaf

characteristic: variety


text: bread wheat

text: USSR 1

text: AWCC

text: exome sequences of ExomeCapture-DAS5-003170 - Accession Name = 'USSR 1'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: Russia

text: Triticum aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

characteristic: specimen voucher

text: subsp. aestivum

characteristic: sub species

text: The exome sequenced hexaploid wheat accessions were selected from a worldwide population of landraces and cultivars obtained from the USDA National Small Grains Collection and the Australian Grains Genebank (formally the Australian Winter Cereal Collection). The worldwide population comprised 3990 accessions from 106 countries that were genotyped using the Infinium iSelect 90K SNP wheat bead chip array. The MCG method was used to select accessions for exome sequencing. This method uses a genetic relationship matrix calculated from genotype data to iteratively chose and arbitrary number of accessions (in the case of this study 20% of the accessions) that collectively explain the largest proportion of variance in genetic relationships among the whole set. Genomic DNA was extracted from leaf tissue for each accession using the Agencourt DNAdvance Genomic DNA Isolation Kit (Beckman Coulter) and subjected to sequence capture using the NimbleGen SeqCap EZ wheat whole genome assay. In brief, 1 µg of DNA was fragmented with the Covaris S2 instrument to obtain an average fragment length of 300 bp. Shorter fragments were removed using Agencourt AMPure XP beads (Beckman Coulter). The KAPA Library Preparation Kit (Kapa Biosystems) and adapters supplied in the NimbleGen SeqCap EZ Reagent Kit Plus v2 (Roche) were used to prepare sample libraries for the capture assay, according to the KAPA protocol but excluding steps 8.1-8.22. The quality and yield of each sample library was assessed using an Agilent 2200 TapeStation (Agilent Technologies) before proceeding to the sequence capture assay following the Roche protocol. Each target capture sequence enriched sample library was sequenced on an Illumina HiSeq2000 instrument (Illumina) to generate about 30 million reads per accession. The project leaders are Matthew Hayden (Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, Victoria, Australia; La Trobe University, Bundoora, Victoria, Australia) and Eduard Akhunov (Kansas State University, USA). More information can be found on our project website at http://wheatgenomics.plantpath.ksu.edu/1000EC

text: leaf


text: bread wheat

characteristic: common name

text: WESTBRED 906

characteristic: cultivar

text: AWCC

text: exome sequences of ExomeCapture-DAS5-003231 - Accession Name = 'WESTBRED 906'; Remarks = 'Red'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: USA

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission description

text: leaf


text: Buenos Aires, Argentina by Buck, J., Buck S.A.

text: bread wheat

text: Buck 12/52

text: USDA GRIN

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-004349 - Accession Name = 'Buck 12/52'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

characteristic: description

text: 2 week old

text: winter wheat

text: Argentina

text: PI 213679

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 213679

text: subsp. aestivum

characteristic: submission identifier

text: Exome sequencing of diverse collection of wheat landraces, cultivars and breeding lines

text: leaf

text: :Buck 12/52


characteristic: SRA accession

text: Santa Fe, Argentina by Vigliano, I.

text: bread wheat

text: Sel. 49-2914 H1096

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-001845 - Accession Name = 'Sel. 49-2914 H1096'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: F

text: Argentina

text: PI 189831

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 189831

text: subsp. aestivum

characteristic: submission title

text: leaf

characteristic: tissue type

text: :Sel. 49-2914 H1096


text: bread wheat

text: GRAECUM 29686

text: AWCC

text: exome sequences of ExomeCapture-DAS5-002419 - Accession Name = 'GRAECUM 29686'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

characteristic: dev stage

text: Russia

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


text: bread wheat

text: NAVARRE 4

text: AWCC

text: exome sequences of ExomeCapture-WATKINS-007443 - Accession Name = 'NAVARRE 4'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

characteristic: ecotype

text: Spain

characteristic: geographic location (country and/or sea)

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


text: bread wheat

text: AWCC

text: exome sequences of ExomeCapture-WATKINS-007145 - Accession Name = 'Aus27319'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Australia

characteristic: material

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf

characteristic: variety


text: Germany by Roemer, T., University of Halle-Saale. DONATED by Swedish Seed Association -Svalov. DONATED 09/28/1950 by Estacao de Melhoramento de Plantas

characteristic: collected by

text: bread wheat

text: Roemer

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-004694 - Accession Name = 'Roemer'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: winter wheat

text: Germany

text: PI 192030

text: Triticum aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: USDA GRIN:PI 192030

text: subsp. aestivum

text: leaf


text: New Zealand by. DONATED 10/18/1962 by Dept. of Scientific & Industrial Res.

text: bread wheat

characteristic: common name

text: Solid-Straw Velvet

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-004587 - Accession Name = 'Solid-Straw Velvet'; Remarks = 'Solid stem.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: winter wheat

text: New Zealand

text: PI 283865

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 283865

characteristic: specimen voucher

text: subsp. aestivum

characteristic: sub species

text: leaf

text: :Solid-Straw Velvet


text: bread wheat

text: SALONIKA 8

characteristic: cultivar

text: AWCC

characteristic: culture collection

text: exome sequences of ExomeCapture-WATKINS-007524 - Accession Name = 'SALONIKA 8'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Greece

text: Salonica;Vissinina, KastoriaNA Thessaloniki (salonica)

characteristic: geographic location (region and locality)

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission description

text: leaf


characteristic: SRA accession

text: bread wheat

text: SARATOVSKAJA 39

text: AWCC

text: exome sequences of ExomeCapture-DAS5-003019 - Accession Name = 'SARATOVSKAJA 39'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

characteristic: description

text: 2 week old

text: Russia

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission identifier

characteristic: submission title

text: leaf


text: Tolbukhin, Bulgaria by Institute for Wheat & Sunflower Research

text: bread wheat

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-003423 - Accession Name = '622-24-65'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

characteristic: dev stage

text: spring wheat

characteristic: ecotype

text: Bulgaria

characteristic: geographic location (country and/or sea)

text: PI 564363

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 564363

text: subsp. aestivum

text: leaf

characteristic: tissue type


text: bread wheat

text: AVS

text: exome sequences of ExomeCapture-DAS5-000154 - Accession Name = 'Aus30282/annuello*37'; Remarks = 'BC1F4 selection'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Aus30282/annuello'

text: 2 week old

text: spring wheat

text: Australia

characteristic: material

text: Triticum aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: The exome sequenced hexaploid wheat accessions were selected from a worldwide population of landraces and cultivars obtained from the USDA National Small Grains Collection and the Australian Grains Genebank (formally the Australian Winter Cereal Collection). The worldwide population comprised 3990 accessions from 106 countries that were genotyped using the Infinium iSelect 90K SNP wheat bead chip array. The MCG method was used to select accessions for exome sequencing. This method uses a genetic relationship matrix calculated from genotype data to iteratively chose and arbitrary number of accessions (in the case of this study 20% of the accessions) that collectively explain the largest proportion of variance in genetic relationships among the whole set. Genomic DNA was extracted from leaf tissue for each accession using the Agencourt DNAdvance Genomic DNA Isolation Kit (Beckman Coulter) and subjected to sequence capture using the NimbleGen SeqCap EZ wheat whole genome assay. In brief, 1 µg of DNA was fragmented with the Covaris S2 instrument to obtain an average fragment length of 300 bp. Shorter fragments were removed using Agencourt AMPure XP beads (Beckman Coulter). The KAPA Library Preparation Kit (Kapa Biosystems) and adapters supplied in the NimbleGen SeqCap EZ Reagent Kit Plus v2 (Roche) were used to prepare sample libraries for the capture assay, according to the KAPA protocol but excluding steps 8.1-8.22. The quality and yield of each sample library was assessed using an Agilent 2200 TapeStation (Agilent Technologies) before proceeding to the sequence capture assay following the Roche protocol. Each target capture sequence enriched sample library was sequenced on an Illumina HiSeq2000 instrument (Illumina) to generate about 30 million reads per accession. The project leaders are Matthew Hayden (Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, Victoria, Australia; La Trobe University, Bundoora, Victoria, Australia) and Eduard Akhunov (Kansas State University, USA). More information can be found on our project website at http://wheatgenomics.plantpath.ksu.edu/1000EC

text: leaf

text: Aus30282 = DOY1/AE.SQUARROSA (334)

characteristic: variety


text: bread wheat

characteristic: common name

text: MOROCCO 426

text: AWCC

text: exome sequences of ExomeCapture-DAS5-002766 - Accession Name = 'MOROCCO 426'; Remarks = 'Hard / White'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Morocco

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

characteristic: specimen voucher

text: subsp. aestivum

text: leaf


text: bread wheat

characteristic: cultivar

text: AVS

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-000647 - Accession Name = 'Aus29636/2*Annuello*7'; Remarks = 'BC2F6 selection'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Aus29636/2*Annuello'

text: 2 week old

text: spring wheat

text: Australia

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: sub species

text: Exome sequencing of diverse collection of wheat landraces, cultivars and breeding lines

text: leaf

text: Aus29636 = CPI/GEDIZ/3/GOO//JO69/CRA/4/AE.SQUARROSA (208)


characteristic: SRA accession

text: wheat

text: AWCC

text: exome sequences of ExomeCapture-WATKINS-007802 - Accession Name = 'Aus28770'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: India

text: Triticum sphaerococcum

text: Triticum aestivum subsp. sphaerococcum

text: subsp. sphaerococcum

characteristic: submission description

text: leaf


text: bread wheat

text: POLAND 2

text: AWCC

text: exome sequences of ExomeCapture-DAS5-002870 - Accession Name = 'POLAND 2'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

characteristic: description

text: 2 week old

text: Poland

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission identifier

text: leaf


text: bread wheat

text: HOPE

text: AWCC

text: exome sequences of ExomeCapture-DAS5-002467 - Accession Name = 'HOPE'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

characteristic: dev stage

text: F

text: Russia

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission title

text: leaf


text: bread wheat

text: AVS

text: exome sequences of ExomeCapture-DAS5-000396 - Accession Name = 'Aus34253/correll*5'; Remarks = 'BC1F4 selection'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Aus34253/correll'

text: 2 week old

text: spring wheat

characteristic: ecotype

text: Australia

characteristic: geographic location (country and/or sea)

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf

text: Aus34253 = D67.2/P66.270//AE.SQUARROSA (220)


text: Tajikistan by. DONATED 01/25/1972 by N.I. Vavilov Institute of Plant Industry

characteristic: collected by

text: bread wheat

text: Ferrugineum 67

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-004406 - Accession Name = 'Ferrugineum 67'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Tadzhikskaja 16/Irodu 1006'

text: 2 week old

text: spring wheat

text: Tajikistan

text: PI 372150

characteristic: material

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 372150

text: subsp. aestivum

text: leaf

characteristic: tissue type

text: :Ferrugineum 67;:WIR 46376


text: bread wheat

characteristic: common name

text: AUSTRALIA 8

text: AWCC

text: exome sequences of ExomeCapture-WATKINS-007148 - Accession Name = 'AUSTRALIA 8'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Australia

text: Triticum aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf

characteristic: variety


text: bread wheat

text: PORTUGAL 34

characteristic: cultivar

text: AWCC

text: exome sequences of ExomeCapture-WATKINS-007494 - Accession Name = 'PORTUGAL 34'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Portugal

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

characteristic: specimen voucher

text: subsp. aestivum

text: leaf


characteristic: SRA accession

text: Burundi by Ingold, M., Federal Agricultural Research Station

text: bread wheat

text: USDA GRIN

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-001002 - Accession Name = 'T-2095'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Burundi

text: PI 351876

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 351876

text: subsp. aestivum

characteristic: sub species

text: leaf


text: bread wheat

text: AVS

text: exome sequences of ExomeCapture-DAS5-000210 - Accession Name = 'Aus30297/annuello*47'; Remarks = 'BC1F4 selection'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Aus30297/annuello'

characteristic: description

text: 2 week old

text: spring wheat

text: Australia

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission description

characteristic: submission identifier

text: leaf

text: Aus30297 = DOY1/AE.SQUARROSA (1024)


text: bread wheat

text: CHINA Sh216

text: AWCC

text: exome sequences of ExomeCapture-WATKINS-007250 - Accession Name = 'CHINA Sh216'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

characteristic: dev stage

text: spring wheat

characteristic: ecotype

text: China

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: The exome sequenced hexaploid wheat accessions were selected from a worldwide population of landraces and cultivars obtained from the USDA National Small Grains Collection and the Australian Grains Genebank (formally the Australian Winter Cereal Collection). The worldwide population comprised 3990 accessions from 106 countries that were genotyped using the Infinium iSelect 90K SNP wheat bead chip array. The MCG method was used to select accessions for exome sequencing. This method uses a genetic relationship matrix calculated from genotype data to iteratively chose and arbitrary number of accessions (in the case of this study 20% of the accessions) that collectively explain the largest proportion of variance in genetic relationships among the whole set. Genomic DNA was extracted from leaf tissue for each accession using the Agencourt DNAdvance Genomic DNA Isolation Kit (Beckman Coulter) and subjected to sequence capture using the NimbleGen SeqCap EZ wheat whole genome assay. In brief, 1 µg of DNA was fragmented with the Covaris S2 instrument to obtain an average fragment length of 300 bp. Shorter fragments were removed using Agencourt AMPure XP beads (Beckman Coulter). The KAPA Library Preparation Kit (Kapa Biosystems) and adapters supplied in the NimbleGen SeqCap EZ Reagent Kit Plus v2 (Roche) were used to prepare sample libraries for the capture assay, according to the KAPA protocol but excluding steps 8.1-8.22. The quality and yield of each sample library was assessed using an Agilent 2200 TapeStation (Agilent Technologies) before proceeding to the sequence capture assay following the Roche protocol. Each target capture sequence enriched sample library was sequenced on an Illumina HiSeq2000 instrument (Illumina) to generate about 30 million reads per accession. The project leaders are Matthew Hayden (Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, Victoria, Australia; La Trobe University, Bundoora, Victoria, Australia) and Eduard Akhunov (Kansas State University, USA). More information can be found on our project website at http://wheatgenomics.plantpath.ksu.edu/1000EC

characteristic: submission title

text: leaf


text: Federal District, Mexico by International Maize & Wheat Improvement Center. DONATED 10/1987 by Moseman, J., USDA-ARS

characteristic: collected by

text: bread wheat

text: Bluebird 'S'

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-001242 - Accession Name = 'Bluebird 'S''; Remarks = 'Resistance to leaf rust, stem rust, yellow (stripe) rust.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Ciano sib//Sonora 64/Klein Rendidor/3/8156 = II23584'

text: 2 week old

text: spring wheat

text: Mexico

characteristic: geographic location (country and/or sea)

text: PI 519357

characteristic: material

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 519357

text: subsp. aestivum

text: leaf

text: :Bluebird 'S';:II-23584-18M-10Y-2M-3Y-1M-OY


text: bread wheat

characteristic: common name

text: CHINA 15

text: AWCC

text: exome sequences of ExomeCapture-WATKINS-007202 - Accession Name = 'CHINA 15'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: China

text: Liaoning;Mukden, Liaoning province

characteristic: geographic location (region and locality)

text: Triticum aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: Exome sequencing of diverse collection of wheat landraces, cultivars and breeding lines

text: leaf

characteristic: tissue type


text: Washington, United States by Allan, R., USDA-ARS

text: bread wheat

text: Restorer 75R182

characteristic: cultivar

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-004692 - Accession Name = 'Restorer 75R182'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '63E33 (timopheevii/Bison) /Itana//63E33/3/3*CI 13438/4/CI 13253/Burt//Omar'

text: 2 week old

text: spring wheat

text: USA

text: CItr 17435

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: USDA GRIN:CItr 17435

characteristic: specimen voucher

text: subsp. aestivum

text: leaf

text: :Restorer 75R182;:CI 17435

characteristic: variety


characteristic: SRA accession

text: 1976 Oklahoma, United States by Gough, F., USDA-ARS; Merkle, O., USDA-ARS

text: bread wheat

text: USDA GRIN

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-001731 - Accession Name = 'OK75Abd-380'; Remarks = 'Carries Sr25, Lr 19.'; Released = '1976'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Little Club/Argus '

characteristic: description

text: 2 week old

text: F

text: USA

text: CItr 17470

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:CItr 17470

text: subsp. aestivum

characteristic: sub species

text: leaf

text: :OK75Abd-380;:LC-Ars 3;:CI 17470


text: bread wheat

text: ZOLOTAVA

text: AWCC

text: exome sequences of ExomeCapture-DAS5-003257 - Accession Name = 'ZOLOTAVA'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

characteristic: dev stage

text: Ukraine

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission description

characteristic: submission identifier

text: leaf


text: bread wheat

text: AWCC

text: exome sequences of ExomeCapture-DAS5-002228 - Accession Name = 'CHAKINSKAYA306'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: winter wheat

characteristic: ecotype

text: Russia

characteristic: geographic location (country and/or sea)

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission title

text: leaf


text: PRE 1940 Luxembourg, Belgium by Wagner, S., Swiss Federal Research Sta. for Agronomy. DONATED 01/29/1970 by Popow, G., Swiss Federal Research Sta. for Agronomy

characteristic: collected by

text: dinkel wheat

characteristic: common name

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-003360 - Accession Name = '69Z6.472'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '50,5.5,490'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Belgium

text: Luxembourg;Ardennen, site 3

characteristic: geographic location (region and locality)

characteristic: lat lon

text: PI 348303

characteristic: material

text: Triticum spelta

text: Triticum aestivum subsp. spelta

text: USDA GRIN:PI 348303

text: subsp. spelta

text: leaf


text: Esfahan, Iran by FAO

text: bread wheat

characteristic: cultivar

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-003660 - Accession Name = '5520'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '33.45,50.28333333,1823'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Iran

text: Esfahan;Golpayegan

text: PI 243777

text: Triticum aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: USDA GRIN:PI 243777

characteristic: specimen voucher

text: subsp. aestivum

text: leaf

characteristic: tissue type


characteristic: SRA accession

text: Federal District, Mexico by Mujeeb-Kazi, A., International Maize & Wheat Improvement Center; Villareal, R., International Maize & Wheat Improvement Center; Delgado, R., International Maize & Wheat Improvement Center; William, M., International Maize & Wheat Improvement Center; Rosas, V., International Maize & Wheat Improvement Center; Cortes, A., International Maize & Wheat Improvement Center

text: bread wheat

text: USDA GRIN

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-003809 - Accession Name = 'CIGM91.344-1'; Remarks = 'Plant height 97 cm. Anthesis 86 d. Physiological maturity 130 d.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Seri M82/Pavon F76//8*Seri M82'

characteristic: description

text: 2 week old

text: spring wheat

text: Mexico

text: PI 613296

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 613296

text: subsp. aestivum

characteristic: sub species

text: leaf

characteristic: variety


text: bread wheat

text: AWCC

text: exome sequences of ExomeCapture-WATKINS-007036 - Accession Name = 'Aus26670'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

characteristic: dev stage

text: spring wheat

characteristic: ecotype

text: Australia

characteristic: geographic location (country and/or sea)

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: The exome sequenced hexaploid wheat accessions were selected from a worldwide population of landraces and cultivars obtained from the USDA National Small Grains Collection and the Australian Grains Genebank (formally the Australian Winter Cereal Collection). The worldwide population comprised 3990 accessions from 106 countries that were genotyped using the Infinium iSelect 90K SNP wheat bead chip array. The MCG method was used to select accessions for exome sequencing. This method uses a genetic relationship matrix calculated from genotype data to iteratively chose and arbitrary number of accessions (in the case of this study 20% of the accessions) that collectively explain the largest proportion of variance in genetic relationships among the whole set. Genomic DNA was extracted from leaf tissue for each accession using the Agencourt DNAdvance Genomic DNA Isolation Kit (Beckman Coulter) and subjected to sequence capture using the NimbleGen SeqCap EZ wheat whole genome assay. In brief, 1 µg of DNA was fragmented with the Covaris S2 instrument to obtain an average fragment length of 300 bp. Shorter fragments were removed using Agencourt AMPure XP beads (Beckman Coulter). The KAPA Library Preparation Kit (Kapa Biosystems) and adapters supplied in the NimbleGen SeqCap EZ Reagent Kit Plus v2 (Roche) were used to prepare sample libraries for the capture assay, according to the KAPA protocol but excluding steps 8.1-8.22. The quality and yield of each sample library was assessed using an Agilent 2200 TapeStation (Agilent Technologies) before proceeding to the sequence capture assay following the Roche protocol. Each target capture sequence enriched sample library was sequenced on an Illumina HiSeq2000 instrument (Illumina) to generate about 30 million reads per accession. The project leaders are Matthew Hayden (Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, Victoria, Australia; La Trobe University, Bundoora, Victoria, Australia) and Eduard Akhunov (Kansas State University, USA). More information can be found on our project website at http://wheatgenomics.plantpath.ksu.edu/1000EC

characteristic: submission description

characteristic: submission identifier

text: leaf


text: Zurich, Switzerland by Swiss Experiment Station for Agriculture. DONATED 12/08/1969 by Ingold, M., Federal Agricultural Research Station

characteristic: collected by

text: bread wheat

characteristic: common name

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-004047 - Accession Name = 'T-1716'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Switzerland

text: PI 351650

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 351650

text: subsp. aestivum

characteristic: submission title

text: leaf


text: Pasco, Peru by Loli, M., Universidad Nacional Agraria

text: bread wheat

text: Trigo

characteristic: cultivar

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-004698 - Accession Name = 'Trigo'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '-11.55083333,-76.69305556,3025'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Peru

text: Pasco;Yanamarca

characteristic: geographic location (region and locality)

characteristic: lat lon

text: PI 477891

characteristic: material

text: Triticum aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 477891

text: subsp. aestivum

text: leaf

text: :Trigo;:PLT 76-1959


characteristic: SRA accession

text: 1969 Montenegro by Institute for Small Grains

text: bread wheat

text: USDA GRIN

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-004285 - Accession Name = '354A-I/7'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '42.00722222,19.31194444,48'; Ancestry = '.'

text: 2 week old

text: winter wheat

text: Montenegro

text: Vladimir

text: PI 345355

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: USDA GRIN:PI 345355

characteristic: specimen voucher

text: subsp. aestivum

text: Exome sequencing of diverse collection of wheat landraces, cultivars and breeding lines

text: leaf

characteristic: tissue type


text: California, United States by Dubcovsky, J., University of California; Zhang, X., University of California; Turner, R., University of California

text: bread wheat

text: Clear White + Hope FT-B1

text: exome sequences of ExomeCapture-WSC-2-2 - Accession Name = 'Clear White + Hope FT-B1'; Remarks = 'This Clear White BC4F5 isogenic line contains dominant Vrn-B1c and Vrn-D1c alleles, as well as an FT-B1 allele from the T. aestivum variety `Hope?, which has a retroelement in the promoter resulting in higher levels of expression. In this background and environment, the Hope FT-B1 allele did not confer a significant difference in flowering time nor yield components, as compared to the wild type FT-B1 sister line.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'GSTR 274 / 4* PI 635044+Yr5+Yr15+Yr17+GPC-B1'

characteristic: description

text: 2 week old

characteristic: dev stage

text: spring wheat

characteristic: ecotype

text: USA

text: PI 672004

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: PI 672004

text: subsp. aestivum

characteristic: sub species

text: leaf

text: :Clear White + Hope FT-B1;USA126:NSGC 19995

characteristic: variety


text: bread wheat

characteristic: common name

text: ELISABETH

text: AWCC

text: exome sequences of ExomeCapture-DAS5-002332 - Accession Name = 'ELISABETH'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: Netherlands

characteristic: geographic location (country and/or sea)

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission description

characteristic: submission identifier

text: leaf


text: bread wheat

text: LATHROP

characteristic: cultivar

text: AWCC

text: exome sequences of ExomeCapture-DAS5-002652 - Accession Name = 'LATHROP'; Remarks = 'Hard / Red'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: USA

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission title

text: leaf


text: 02/05/1969 by Simon, M., Institute National Recherche Agronomique. DEVELOPED 1969 Loiret, France by Tourneur Freres

characteristic: collected by

text: bread wheat

text: Etendard

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-004402 - Accession Name = 'Etendard'; Remarks = '.'; Released = '1969'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Mon Desir/Warren//PLM 1/Vilmorin 27/3/Moyencourt/Goldendrop/4/Florence Aurore/Institut Agronomique/5/Bankut/Chanteclair/Etoile de Choisy'

text: 2 week old

text: winter wheat

text: France

text: PI 339845

characteristic: material

text: Triticum aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 339845

text: subsp. aestivum

text: leaf

text: :Etendard


characteristic: SRA accession

text: bread wheat

text: AVS

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-000941 - Accession Name = 'Aus29680/2*Annuello*1'; Remarks = 'BC2F6 selection'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Aus29680/2*Annuello'

text: 2 week old

text: spring wheat

text: Australia

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: subsp. aestivum

text: leaf

text: Aus29680 = CPI/GEDIZ/3/GOO//JO69/CRA/4/AE.SQUARROSA (390)


text: bread wheat

text: SARAJEVO 1

text: AWCC

text: exome sequences of ExomeCapture-WATKINS-007803 - Accession Name = 'SARAJEVO 1'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

characteristic: description

text: 2 week old

text: spring wheat

text: not provided

text: not provided

characteristic: geographic location (region and locality)

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

characteristic: specimen voucher

text: subsp. aestivum

text: The exome sequenced hexaploid wheat accessions were selected from a worldwide population of landraces and cultivars obtained from the USDA National Small Grains Collection and the Australian Grains Genebank (formally the Australian Winter Cereal Collection). The worldwide population comprised 3990 accessions from 106 countries that were genotyped using the Infinium iSelect 90K SNP wheat bead chip array. The MCG method was used to select accessions for exome sequencing. This method uses a genetic relationship matrix calculated from genotype data to iteratively chose and arbitrary number of accessions (in the case of this study 20% of the accessions) that collectively explain the largest proportion of variance in genetic relationships among the whole set. Genomic DNA was extracted from leaf tissue for each accession using the Agencourt DNAdvance Genomic DNA Isolation Kit (Beckman Coulter) and subjected to sequence capture using the NimbleGen SeqCap EZ wheat whole genome assay. In brief, 1 µg of DNA was fragmented with the Covaris S2 instrument to obtain an average fragment length of 300 bp. Shorter fragments were removed using Agencourt AMPure XP beads (Beckman Coulter). The KAPA Library Preparation Kit (Kapa Biosystems) and adapters supplied in the NimbleGen SeqCap EZ Reagent Kit Plus v2 (Roche) were used to prepare sample libraries for the capture assay, according to the KAPA protocol but excluding steps 8.1-8.22. The quality and yield of each sample library was assessed using an Agilent 2200 TapeStation (Agilent Technologies) before proceeding to the sequence capture assay following the Roche protocol. Each target capture sequence enriched sample library was sequenced on an Illumina HiSeq2000 instrument (Illumina) to generate about 30 million reads per accession. The project leaders are Matthew Hayden (Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, Victoria, Australia; La Trobe University, Bundoora, Victoria, Australia) and Eduard Akhunov (Kansas State University, USA). More information can be found on our project website at http://wheatgenomics.plantpath.ksu.edu/1000EC

text: leaf

characteristic: tissue type


text: bread wheat

text: POLAND 21

text: AWCC

text: exome sequences of ExomeCapture-DAS5-002871 - Accession Name = 'POLAND 21'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

characteristic: dev stage

text: Poland

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: sub species

text: leaf

characteristic: variety


text: bread wheat

characteristic: common name

text: AVS

text: exome sequences of ExomeCapture-DAS5-000094 - Accession Name = 'Aus30268/annuello*25'; Remarks = 'BC1F4 selection'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Aus30268/annuello'

text: 2 week old

text: spring wheat

characteristic: ecotype

text: Australia

characteristic: geographic location (country and/or sea)

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission description

text: leaf

text: Aus30268 = GREEE.SQUARROSA (458)


text: bread wheat

characteristic: cultivar

text: AWCC

text: exome sequences of ExomeCapture-DAS5-H45 - Accession Name = 'H45'; Remarks = 'Soft'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: winter wheat

text: Australia

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission identifier

characteristic: submission title

text: leaf


characteristic: SRA accession

text: Rift Valley, Kenya by Plant Breeding Station

characteristic: collected by

text: bread wheat

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-003749 - Accession Name = '505.M.I.D.7'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '318AJ/Regent'

text: 2 week old

text: spring wheat

text: Kenya

text: PI 254124

characteristic: material

text: Triticum aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 254124

text: subsp. aestivum

text: leaf


text: bread wheat

text: Lewjain

text: AWCC

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-LEWJAIN - Accession Name = 'Lewjain'; Remarks = 'Soft / White'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

characteristic: description

text: 2 week old

text: winter wheat

text: USA

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: subsp. aestivum

text: Exome sequencing of diverse collection of wheat landraces, cultivars and breeding lines

text: leaf


text: Colonia, Uruguay by Instituto Fitotecnico

text: bread wheat

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-004212 - Accession Name = '123-364'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Sinvalocho/Petiblanco'

text: 2 week old

characteristic: dev stage

text: spring wheat

text: Uruguay

text: PI 225482

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 225482

characteristic: specimen voucher

text: subsp. aestivum

text: leaf

characteristic: tissue type


text: Jiangsu, China by Jiangsu Academy of Agricultural Science

text: bread wheat

characteristic: common name

text: Ning 8319

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-001672 - Accession Name = 'Ning 8319'; Remarks = 'Resistance to powdery mildew and scab (Fusarium sp.).'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Ning mai 4/Olesen (F1)//Alondra Sib/Yang mai 3 (F1),F6'

text: 2 week old

text: spring wheat

text: China

text: PI 531190

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 531190

text: subsp. aestivum

characteristic: sub species

text: leaf

text: :Ning 8319

characteristic: variety


text: 1991 Mato Grosso do Sul, Brazil by EMBRAPA.

text: bread wheat

text: Ofaie

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-001730 - Accession Name = 'Ofaie'; Remarks = '.'; Released = '1991'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'BH 1146*6/Alondra sib'

text: 2 week old

text: spring wheat

characteristic: ecotype

text: Brazil

characteristic: geographic location (country and/or sea)

text: PI 584920

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 584920

text: subsp. aestivum

characteristic: submission description

text: leaf

text: :Ofaie;:BR 41;:Trigo BR 41;:NSGC 1998


text: bread wheat

characteristic: cultivar

text: AVS

text: exome sequences of ExomeCapture-DAS5-000588 - Accession Name = 'Aus29659/2*Annuello*8'; Remarks = 'BC2F6 selection'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Aus29659/2*Annuello'

text: 2 week old

text: spring wheat

text: Australia

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission identifier

characteristic: submission title

text: leaf

text: Aus29659 = 68.111/RGB-U//WARD/3/FGO/4/RABI/5/AE.SQUARROSA (809)


characteristic: SRA accession

text: bread wheat

text: KLEIN GRANADERO

text: AWCC

text: exome sequences of ExomeCapture-DAS5-002570 - Accession Name = 'KLEIN GRANADERO'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: Argentina

characteristic: material

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


text: 07/28/1985 Hakkari, Turkey by Sperling, C., Harvard University Herbaria; Gecit, H., Ankara University; Eser, D., Ankara University

characteristic: collected by

text: bread wheat

text: USDA GRIN

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-004699 - Accession Name = 'TU85-048-03-1'; Remarks = 'Several vars. mixed in field (2 bags collected) Soil pH 7.80. Seed red, awned, awns white. Glumes white, non-pubescent. Growing mixed with TU85-048-02, 048-04 and 048-05. Originally collected in same sample as TU85-048-03-2 -- the two types together comprising 5% of field'; Released = '.'; Lattitude,Longitude,Elevation = '37.73333333,44.08333333,1750'; Ancestry = '.'

text: 2 week old

text: F

text: Turkey

text: Hakkari;W side of road, 4km S of Hakkari-Van Province boundary. On the road Hakkari-Van

characteristic: geographic location (region and locality)

characteristic: lat lon

text: PI 560637

text: Triticum aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 560637

text: subsp. aestivum

text: The exome sequenced hexaploid wheat accessions were selected from a worldwide population of landraces and cultivars obtained from the USDA National Small Grains Collection and the Australian Grains Genebank (formally the Australian Winter Cereal Collection). The worldwide population comprised 3990 accessions from 106 countries that were genotyped using the Infinium iSelect 90K SNP wheat bead chip array. The MCG method was used to select accessions for exome sequencing. This method uses a genetic relationship matrix calculated from genotype data to iteratively chose and arbitrary number of accessions (in the case of this study 20% of the accessions) that collectively explain the largest proportion of variance in genetic relationships among the whole set. Genomic DNA was extracted from leaf tissue for each accession using the Agencourt DNAdvance Genomic DNA Isolation Kit (Beckman Coulter) and subjected to sequence capture using the NimbleGen SeqCap EZ wheat whole genome assay. In brief, 1 µg of DNA was fragmented with the Covaris S2 instrument to obtain an average fragment length of 300 bp. Shorter fragments were removed using Agencourt AMPure XP beads (Beckman Coulter). The KAPA Library Preparation Kit (Kapa Biosystems) and adapters supplied in the NimbleGen SeqCap EZ Reagent Kit Plus v2 (Roche) were used to prepare sample libraries for the capture assay, according to the KAPA protocol but excluding steps 8.1-8.22. The quality and yield of each sample library was assessed using an Agilent 2200 TapeStation (Agilent Technologies) before proceeding to the sequence capture assay following the Roche protocol. Each target capture sequence enriched sample library was sequenced on an Illumina HiSeq2000 instrument (Illumina) to generate about 30 million reads per accession. The project leaders are Matthew Hayden (Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, Victoria, Australia; La Trobe University, Bundoora, Victoria, Australia) and Eduard Akhunov (Kansas State University, USA). More information can be found on our project website at http://wheatgenomics.plantpath.ksu.edu/1000EC

text: leaf

text: :TU85-048-03-1;:TU85-048-03;:CRS 0585


text: Namur, Belgium by Station d'Amelioration des Plantes. DONATED 09/28/1950 by Estacion Experimental de Aula Dei

text: bread wheat

text: Bledor

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-004343 - Accession Name = 'Bledor'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Benoist/Professeur Delos'

characteristic: description

text: 2 week old

characteristic: dev stage

text: winter wheat

text: Belgium

text: PI 191304

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: USDA GRIN:PI 191304

characteristic: specimen voucher

text: subsp. aestivum

text: leaf

characteristic: tissue type


text: bread wheat

characteristic: common name

text: VELUTINUM

text: AWCC

text: exome sequences of ExomeCapture-DAS5-003208 - Accession Name = 'VELUTINUM'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: Russia

characteristic: geographic location (country and/or sea)

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: sub species

text: leaf

characteristic: variety


text: bread wheat

text: SARAJEVO 4

characteristic: cultivar

text: AWCC

text: exome sequences of ExomeCapture-WATKINS-007745 - Accession Name = 'SARAJEVO 4'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

characteristic: ecotype

text: not provided

text: not provided

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission description

characteristic: submission identifier

text: Exome sequencing of diverse collection of wheat landraces, cultivars and breeding lines

characteristic: submission title

text: leaf


characteristic: SRA accession

text: bread wheat

text: AVS

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-000237 - Accession Name = 'Aus30302/annuello*29'; Remarks = 'BC1F4 selection'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Aus30302/annuello'

text: 2 week old

text: spring wheat

text: Australia

characteristic: material

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf

text: Aus30302 = CETA/AE.SQUARROSA (1030)


text: Belgium by Estacion Experimental de Aula Dei. DONATED 09/28/1950 by Estacion Experimental de Aula Dei

characteristic: collected by

text: bread wheat

text: Blanc Precoce

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-004342 - Accession Name = 'Blanc Precoce'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

characteristic: description

text: 2 week old

text: winter wheat

text: Belgium

text: PI 191272

text: Triticum aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 191272

text: subsp. aestivum

text: leaf

text: :Blanc Precoce;:2496


text: 02/19/1979 Los Lagos, Chile by Barclay, A., USDA, ARS; Craddock, J., USDA-ARS, Plant Industry Station

text: bread wheat

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-004288 - Accession Name = '403'; Remarks = 'Aleurone red. Kernel texture semi-hard. Awnless. Chaff brown. Plants uniform.'; Released = '.'; Lattitude,Longitude,Elevation = '-42.43333333,-73.76666667,25'; Ancestry = '.'

text: 2 week old

characteristic: dev stage

text: winter wheat

text: Chile

text: Los Lagos;5km north of Castro

characteristic: geographic location (region and locality)

characteristic: lat lon

text: PI 436435

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: USDA GRIN:PI 436435

characteristic: specimen voucher

text: subsp. aestivum

text: leaf

text: :403;:JC 0279


text: Netherlands by. DONATED by Swedish Seed Association -Svalov. DONATED 09/28/1950 by Estacao de Melhoramento de Plantas

text: bread wheat

characteristic: common name

text: Emma

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-001374 - Accession Name = 'Emma'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Essex Gladkaf/Wilhelmina'

text: 2 week old

text: spring wheat

text: Netherlands

characteristic: geographic location (country and/or sea)

text: PI 192361

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 192361

text: subsp. aestivum

characteristic: sub species

text: leaf

characteristic: tissue type

characteristic: variety


text: bread wheat

text: TULUN 408

characteristic: cultivar

text: AWCC

text: exome sequences of ExomeCapture-DAS5-003140 - Accession Name = 'TULUN 408'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: Russia

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission description

characteristic: submission identifier

characteristic: submission title

text: leaf


characteristic: SRA accession

text: bread wheat

text: RUSSIA 21

text: AWCC

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-002959 - Accession Name = 'RUSSIA 21'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: Russia

characteristic: material

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


text: bread wheat

text: TUNIS 9

text: AWCC

text: exome sequences of ExomeCapture-WATKINS-007035 - Accession Name = 'TUNIS 9'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

characteristic: description

text: 2 week old

characteristic: dev stage

text: spring wheat

characteristic: ecotype

text: Tunisia

text: Beja;THIBAR, Beja

text: Triticum aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


text: Tachira, Venezuela by Pittier, H., Museo Comercial, Ministero de Relaciones Exteriores

characteristic: collected by

text: bread wheat

text: Grande del Norte

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-001433 - Accession Name = 'Grande del Norte'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '7.83333333,-72.08333333,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Venezuela

characteristic: lat lon

text: PI 62362

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: USDA GRIN:PI 62362

characteristic: specimen voucher

text: subsp. aestivum

text: leaf

text: :Grande del Norte;:CItr 8356;:AUS 7446;:CI 8356


ExomeCapture-Vida

text: 2006 Montana, United States by Talbert, L., Montana State University; Kushnak, G., Montana State University; Carlson, G., Montana State University; Eckhoff, J., Montana State University; Wichman, D., Montana State University; Lanning, S., Montana State University; Stougaard, R., Montana State University; Kephart, K., Montana State University; Grey, W., Montana State University; Nash, D., Montana State University; Dyer, A., Montana State University

text: bread wheat

characteristic: common name

text: Vida

text: exome sequences of ExomeCapture-Vida - Accession Name = 'Vida'; Remarks = 'Semi-dwarf hard red spring wheat with semi-solid stems. Mid-late in maturity. Semi-solid stems provide intermediate resistance to the wheat stem sawfly. Moderately susceptible to prevalent races of stem rust in Montana. Shows moderate resistance to stripe rust and Septoria across Montana. Has semi-lax tapering head with white glumes and awns. Kernels are red, ovate with rounded cheeks and mid-deep crease.'; Released = '2006'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Scholar/Reeder'

text: 2 week old

text: spring wheat

text: USA

characteristic: geographic location (country and/or sea)

text: PI 642366

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: PI 642366

text: subsp. aestivum

characteristic: sub species

text: The exome sequenced hexaploid wheat accessions were selected from a worldwide population of landraces and cultivars obtained from the USDA National Small Grains Collection and the Australian Grains Genebank (formally the Australian Winter Cereal Collection). The worldwide population comprised 3990 accessions from 106 countries that were genotyped using the Infinium iSelect 90K SNP wheat bead chip array. The MCG method was used to select accessions for exome sequencing. This method uses a genetic relationship matrix calculated from genotype data to iteratively chose and arbitrary number of accessions (in the case of this study 20% of the accessions) that collectively explain the largest proportion of variance in genetic relationships among the whole set. Genomic DNA was extracted from leaf tissue for each accession using the Agencourt DNAdvance Genomic DNA Isolation Kit (Beckman Coulter) and subjected to sequence capture using the NimbleGen SeqCap EZ wheat whole genome assay. In brief, 1 µg of DNA was fragmented with the Covaris S2 instrument to obtain an average fragment length of 300 bp. Shorter fragments were removed using Agencourt AMPure XP beads (Beckman Coulter). The KAPA Library Preparation Kit (Kapa Biosystems) and adapters supplied in the NimbleGen SeqCap EZ Reagent Kit Plus v2 (Roche) were used to prepare sample libraries for the capture assay, according to the KAPA protocol but excluding steps 8.1-8.22. The quality and yield of each sample library was assessed using an Agilent 2200 TapeStation (Agilent Technologies) before proceeding to the sequence capture assay following the Roche protocol. Each target capture sequence enriched sample library was sequenced on an Illumina HiSeq2000 instrument (Illumina) to generate about 30 million reads per accession. The project leaders are Matthew Hayden (Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, Victoria, Australia; La Trobe University, Bundoora, Victoria, Australia) and Eduard Akhunov (Kansas State University, USA). More information can be found on our project website at http://wheatgenomics.plantpath.ksu.edu/1000EC

text: leaf

characteristic: tissue type


text: bread wheat

text: BROVKI

characteristic: cultivar

text: AWCC

text: exome sequences of ExomeCapture-DAS5-002165 - Accession Name = 'BROVKI'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: Russia

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission description

characteristic: submission identifier

text: Exome sequencing of diverse collection of wheat landraces, cultivars and breeding lines

text: leaf

characteristic: variety


characteristic: SRA accession

text: bread wheat

text: AVS

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-000402 - Accession Name = 'Aus34255/correll*27'; Remarks = 'BC1F4 selection'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Aus34255/correll'

text: 2 week old

text: spring wheat

text: Australia

characteristic: material

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission title

text: leaf

text: Aus34255 = D67.2/P66.270//AE.SQUARROSA (221)


text: Coimbra, Portugal by. DONATED 09/28/1950 by Estacao de Melhoramento de Plantas

text: bread wheat

text: Tremes Arroxeado

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-001924 - Accession Name = 'Tremes Arroxeado'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '40.15,-8.86666667,21'; Ancestry = '.'

characteristic: description

text: 2 week old

characteristic: dev stage

text: spring wheat

characteristic: ecotype

text: Portugal

text: Coimbra;Figueira da Foz

characteristic: geographic location (region and locality)

text: PI 192808

text: Triticum aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 192808

text: subsp. aestivum

text: leaf

text: :Tremes Arroxeado;:2552A;:2613


text: bread wheat

characteristic: common name

text: AWCC

text: exome sequences of ExomeCapture-WATKINS-007089 - Accession Name = 'Aus27258'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Australia

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

characteristic: specimen voucher

text: subsp. aestivum

text: leaf


text: Chile by. DONATED 10/1987 by Moseman, J., USDA-ARS

characteristic: collected by

text: bread wheat

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-003447 - Accession Name = 'CH-7790-12P-9P-1P-1P'; Remarks = 'Resistance to leaf rust.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Rulofen/4/Frocor/Kenya//Newthatch/3/Norin 10/Brevor'

text: 2 week old

text: spring wheat

text: Chile

characteristic: geographic location (country and/or sea)

text: PI 519580

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 519580

text: subsp. aestivum

characteristic: sub species

text: leaf

characteristic: tissue type


text: Iraq by Inspector General of Agriculture

text: bread wheat

characteristic: cultivar

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-003689 - Accession Name = '572'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Iraq

text: PI 70714

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 70714

text: subsp. aestivum

characteristic: submission description

characteristic: submission identifier

text: leaf

text: :572;:CItr 9057;:CI 9057

characteristic: variety


characteristic: SRA accession

text: bread wheat

text: AVS

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-000885 - Accession Name = 'Aus29651/2*Annuello*5'; Remarks = 'BC2F6 selection'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Aus29651/2*Annuello'

text: 2 week old

text: spring wheat

text: Australia

characteristic: material

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission title

text: leaf

text: Aus29651 = YAV79//DACK/RABI/3/SNIPE/4/AE.SQUARROSA (477)


text: bread wheat

text: GRAECUM 114

text: AWCC

text: exome sequences of ExomeCapture-DAS5-002416 - Accession Name = 'GRAECUM 114'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

characteristic: description

text: 2 week old

characteristic: dev stage

text: Russia

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf


text: Federal District, Mexico by International Maize & Wheat Improvement Center. DONATED 10/1987 by Moseman, J., USDA-ARS

text: dinkel wheat

characteristic: common name

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-003794 - Accession Name = '26867-302Y-300M-OY'; Remarks = 'Resistance to stem rust.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Luisa Strampelli 3-1/Pitic 62//Inia/Corre Caminos//Inia'

text: 2 week old

text: spring wheat

characteristic: ecotype

text: Mexico

text: PI 520066

text: Triticum spelta

characteristic: organism

text: Triticum aestivum subsp. spelta

text: USDA GRIN:PI 520066

text: subsp. spelta

text: leaf


text: Syria by. DONATED 10/1987 by Moseman, J., USDA-ARS

characteristic: collected by

text: bread wheat

text: SE 381-4S-1S-6S-OS

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-001842 - Accession Name = 'SE 381-4S-1S-6S-OS'; Remarks = 'Resistance to stem and leaf rust.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Kavkaz/4/Chile/Inia/3/Ciano//El Goucho/Sonora'

text: 2 week old

text: spring wheat

text: Syria

text: PI 520377

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

text: USDA GRIN:PI 520377

characteristic: specimen voucher

text: subsp. aestivum

text: The exome sequenced hexaploid wheat accessions were selected from a worldwide population of landraces and cultivars obtained from the USDA National Small Grains Collection and the Australian Grains Genebank (formally the Australian Winter Cereal Collection). The worldwide population comprised 3990 accessions from 106 countries that were genotyped using the Infinium iSelect 90K SNP wheat bead chip array. The MCG method was used to select accessions for exome sequencing. This method uses a genetic relationship matrix calculated from genotype data to iteratively chose and arbitrary number of accessions (in the case of this study 20% of the accessions) that collectively explain the largest proportion of variance in genetic relationships among the whole set. Genomic DNA was extracted from leaf tissue for each accession using the Agencourt DNAdvance Genomic DNA Isolation Kit (Beckman Coulter) and subjected to sequence capture using the NimbleGen SeqCap EZ wheat whole genome assay. In brief, 1 µg of DNA was fragmented with the Covaris S2 instrument to obtain an average fragment length of 300 bp. Shorter fragments were removed using Agencourt AMPure XP beads (Beckman Coulter). The KAPA Library Preparation Kit (Kapa Biosystems) and adapters supplied in the NimbleGen SeqCap EZ Reagent Kit Plus v2 (Roche) were used to prepare sample libraries for the capture assay, according to the KAPA protocol but excluding steps 8.1-8.22. The quality and yield of each sample library was assessed using an Agilent 2200 TapeStation (Agilent Technologies) before proceeding to the sequence capture assay following the Roche protocol. Each target capture sequence enriched sample library was sequenced on an Illumina HiSeq2000 instrument (Illumina) to generate about 30 million reads per accession. The project leaders are Matthew Hayden (Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, Victoria, Australia; La Trobe University, Bundoora, Victoria, Australia) and Eduard Akhunov (Kansas State University, USA). More information can be found on our project website at http://wheatgenomics.plantpath.ksu.edu/1000EC

text: leaf

text: :SE 381-4S-1S-6S-OS


text: Lima, Peru by Universidad Agraria

text: bread wheat

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-003911 - Accession Name = '79'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Maria Escobar/H44-Marquis, CI 11782'

text: 2 week old

text: spring wheat

text: Peru

characteristic: geographic location (country and/or sea)

text: PI 205731

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 205731

text: subsp. aestivum

characteristic: sub species

text: Exome sequencing of diverse collection of wheat landraces, cultivars and breeding lines

text: leaf

characteristic: tissue type


text: Former Soviet Union by. DONATED 01/11/1962 by Dept. of Scientific & Industrial Res.

text: bread wheat

characteristic: cultivar

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-003553 - Accession Name = '2338'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Russia

text: PI 278478

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 278478

text: subsp. aestivum

characteristic: submission description

characteristic: submission identifier

text: leaf


characteristic: SRA accession

text: bread wheat

text: AVS

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-000452 - Accession Name = 'Aus34279/correll*19'; Remarks = 'BC1F4 selection'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Aus34279/correll'

text: 2 week old

text: spring wheat

text: Australia

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf

text: Aus34279 = ALTAR 84/AE.SQUARROSA (328)

characteristic: variety


text: bread wheat

text: VALKI 38-R-E-MG

text: AWCC

text: exome sequences of ExomeCapture-DAS5-003191 - Accession Name = 'VALKI 38-R-E-MG'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

characteristic: description

text: 2 week old

text: Russia

characteristic: material

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission title

text: leaf


text: by Max Planck Institute of Plant Breeding Research. COLLECTED Former Soviet Union by. DONATED 12/08/1969 by Ingold, M., Federal Agricultural Research Station

text: wheat

characteristic: common name

text: Letshchumicum

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-004476 - Accession Name = 'Letshchumicum'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '42,43.3,.'; Ancestry = '.'

text: 2 week old

characteristic: dev stage

text: winter wheat

characteristic: ecotype

text: Russia

text: Caucasus region

characteristic: geographic location (region and locality)

characteristic: lat lon

text: PI 352466

text: Triticum macha

text: Triticum aestivum subsp. macha

text: USDA GRIN:PI 352466

text: subsp. macha

text: leaf


text: bread wheat

text: AVS

text: exome sequences of ExomeCapture-DAS5-000401 - Accession Name = 'Aus34255/correll*24'; Remarks = 'BC1F4 selection'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Aus34255/correll'

text: 2 week old

text: spring wheat

text: Australia

characteristic: geographic location (country and/or sea)

text: Triticum aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

characteristic: specimen voucher

text: subsp. aestivum

text: leaf

text: Aus34255 = D67.2/P66.270//AE.SQUARROSA (221)


text: bread wheat

text: NAVARRE 72

characteristic: cultivar

text: AWCC

text: exome sequences of ExomeCapture-WATKINS-007684 - Accession Name = 'NAVARRE 72'; Remarks = '.'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Spain

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: sub species

characteristic: submission description

text: leaf

characteristic: tissue type


characteristic: SRA accession

text: bread wheat

text: AVS

characteristic: culture collection

text: exome sequences of ExomeCapture-DAS5-000288 - Accession Name = 'Aus33381/yitpi*50'; Remarks = 'BC1F4 selection'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Aus33381/yitpi'

text: 2 week old

text: spring wheat

text: Australia

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

characteristic: submission identifier

text: leaf

text: Aus33381 = RASCOE.SQUARROSA (367)

characteristic: variety


text: Federal District, Mexico by Mujeeb-Kazi, A., International Maize & Wheat Improvement Center; Rajaram, S., International Maize & Wheat Improvement Center; Delgado, R., International Maize & Wheat Improvement Center; Rosas, V., International Maize & Wheat Improvement Center; Cortes, A., International Maize & Wheat Improvement Center; Cano, S., International Mazie and Wheat Improvement Center

characteristic: collected by

text: bread wheat

characteristic: common name

text: USDA GRIN

text: exome sequences of ExomeCapture-DAS5-003805 - Accession Name = 'CIGM90.1291'; Remarks = 'Spring-type bread wheat germplasm with resistance to spot blotch (Cochliobolus sativus). Anthesis 68d. Maturity 89d. Height 76cm. Blotch 3-2 (first digit indicates the height of infection, where 1=lowest leaf; 5=up to mid-plant; and 9=up to flag leaf; the second digit indicates disease severity on infected leaves, where 1=10% coverage; 5=50% coverage; and 9=90% coverage). Grain 1 (1=low grain infection and 5=severely infected).'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Altar/Ae. tauschii(224)//2*Yaco'

characteristic: description

text: 2 week old

text: spring wheat

text: Mexico

text: PI 613323

characteristic: material

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: USDA GRIN:PI 613323

text: subsp. aestivum

characteristic: submission title

text: leaf


text: bread wheat

text: AVS

text: exome sequences of ExomeCapture-DAS5-000069 - Accession Name = 'Aus30264/annuello*79'; Remarks = 'BC1F4 selection'; Released = '.'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = 'Aus30264/annuello'

text: 2 week old

characteristic: dev stage

text: spring wheat

characteristic: ecotype

text: Australia

characteristic: geographic location (country and/or sea)

text: Triticum aestivum

text: Triticum aestivum subsp. aestivum

text: subsp. aestivum

text: leaf

text: Aus30264 = RASCOE.SQUARROSA (385)


text: bread wheat

text: EGA Hume

text: AWCC

text: exome sequences of ExomeCapture-DAS5-EGA-HUME - Accession Name = 'EGA Hume'; Remarks = '.'; Released = '2001'; Lattitude,Longitude,Elevation = '.,.,.'; Ancestry = '.'

text: 2 week old

text: spring wheat

text: Australia

text: Triticum aestivum

characteristic: organism

text: Triticum aestivum subsp. aestivum

characteristic: scientific name

characteristic: specimen voucher

text: subsp. aestivum

text: leaf