text: LHC, CCR, NCI

text: live

text: Generic

characteristic: NCBI submission model

characteristic: SRA accession

text: missing

text: No

text: NEG

text: missing

text: Homo sapiens

text: AA

text: frozen breast tumors

text: breast tumors

text: Breast tumors, 41-17624


status: PUBLIC

characteristic: External Id

text: LHC, CCR, NCI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission package

tag: attribute

characteristic: age

text: missing

text: Yes

characteristic: diabetes info

text: II

characteristic: diabetes type

characteristic: disease grade

text: POS

characteristic: er status

text: missing

text: Homo sapiens

characteristic: organism

text: AA

characteristic: race

text: frozen breast tumors

text: breast tumors

characteristic: tissue

text: Breast tumors, 40-17351

characteristic: title


text: LHC, CCR, NCI

text: live

text: Generic

characteristic: NCBI submission model

characteristic: SRA accession

text: missing

text: Yes

text: II

text: NEG

text: missing

text: Homo sapiens

text: AA

text: frozen breast tumors

text: breast tumors

text: Breast tumors, 39-17268


characteristic: External Id

text: LHC, CCR, NCI

characteristic: INSDC center name

text: live

text: Generic

text: missing

text: Yes

text: II

text: POS

text: missing

text: Homo sapiens

text: AA

text: frozen breast tumors

text: breast tumors

text: Breast tumors, 38-17014


text: LHC, CCR, NCI

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: missing

text: No

text: NEG

text: missing

text: Homo sapiens

text: CC

text: frozen breast tumors

text: breast tumors

text: Breast tumors, 37-16718


text: LHC, CCR, NCI

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: missing

text: Yes

text: II

text: NEG

text: missing

text: Homo sapiens

text: AA

text: frozen breast tumors

text: breast tumors

text: Breast tumors, 36-16666


text: LHC, CCR, NCI

text: live

text: Generic

characteristic: NCBI submission package

characteristic: age

text: missing

text: Yes

text: II

text: POS

text: missing

text: Homo sapiens

text: AA

text: frozen breast tumors

text: breast tumors

text: Breast tumors, 35-16404


text: LHC, CCR, NCI

text: live

text: Generic

text: missing

text: No

characteristic: diabetes info

text: POS

text: missing

text: Homo sapiens

text: AA

text: frozen breast tumors

text: breast tumors

text: Breast tumors, 34-16301


text: LHC, CCR, NCI

text: live

text: Generic

text: missing

text: No

characteristic: disease grade

text: POS

text: missing

text: Homo sapiens

text: AA

text: frozen breast tumors

text: breast tumors

text: Breast tumors, 33-16087


text: LHC, CCR, NCI

text: live

text: Generic

text: missing

text: Yes

text: II

characteristic: diabetes type

text: NEG

characteristic: er status

text: missing

text: Homo sapiens

text: AA

text: frozen breast tumors

text: breast tumors

text: Breast tumors, 32-16086


text: LHC, CCR, NCI

text: live

text: Generic

text: missing

text: Yes

text: II

text: POS

text: missing

text: Homo sapiens

characteristic: organism

text: AA

characteristic: race

text: frozen breast tumors

text: breast tumors

text: Breast tumors, 30-15842


text: LHC, CCR, NCI

text: live

text: Generic

text: missing

text: Yes

text: II

text: POS

text: missing

text: Homo sapiens

text: AA

text: frozen breast tumors

text: breast tumors

characteristic: tissue

text: Breast tumors, 29-15800

characteristic: title


text: LHC, CCR, NCI

text: live

text: Generic

characteristic: NCBI submission model

characteristic: SRA accession

text: missing

text: No

text: POS

text: missing

text: Homo sapiens

text: AA

text: frozen breast tumors

text: breast tumors

text: Breast tumors, 28-15703


characteristic: External Id

text: LHC, CCR, NCI

characteristic: INSDC center name

text: live

text: Generic

text: missing

text: No

text: POS

text: missing

text: Homo sapiens

text: CC

text: frozen breast tumors

text: breast tumors

text: Breast tumors, 27-15425


text: LHC, CCR, NCI

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: missing

text: No

text: NEG

text: missing

text: Homo sapiens

text: AA

text: frozen breast tumors

text: breast tumors

text: Breast tumors, 25-15047


text: LHC, CCR, NCI

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: missing

text: Yes

text: II

text: POS

text: missing

text: Homo sapiens

text: AA

text: frozen breast tumors

text: breast tumors

text: Breast tumors, 24-15046


text: LHC, CCR, NCI

text: live

text: Generic

characteristic: NCBI submission package

characteristic: age

text: missing

text: No

text: POS

text: missing

text: Homo sapiens

text: AA

text: frozen breast tumors

text: breast tumors

text: Breast tumors, 23-13583


text: LHC, CCR, NCI

text: live

text: Generic

text: missing

text: Yes

characteristic: diabetes info

text: II

characteristic: disease grade

text: NEG

text: missing

text: Homo sapiens

text: CC

text: frozen breast tumors

text: breast tumors

text: Breast tumors, 21-12645


text: LHC, CCR, NCI

text: live

text: Generic

text: missing

text: Yes

text: I

characteristic: diabetes type

text: POS

characteristic: er status

text: missing

text: Homo sapiens

text: AA

text: frozen breast tumors

text: breast tumors

text: Breast tumors, 20-12424


text: LHC, CCR, NCI

text: live

text: Generic

text: missing

text: No

text: POS

text: missing

text: Homo sapiens

characteristic: organism

text: AA

characteristic: race

text: frozen breast tumors

text: breast tumors

text: Breast tumors, 18-9791


text: LHC, CCR, NCI

text: live

text: Generic

text: missing

text: No

text: NEG

text: missing

text: Homo sapiens

text: AA

text: frozen breast tumors

text: breast tumors

characteristic: tissue

text: Breast tumors, 16-9763

characteristic: title


text: LHC, CCR, NCI

text: live

text: Generic

characteristic: NCBI submission model

characteristic: SRA accession

text: missing

text: Yes

text: I

text: POS

text: missing

text: Homo sapiens

text: AA

text: frozen breast tumors

text: breast tumors

text: Breast tumors, 15-9525


characteristic: External Id

text: LHC, CCR, NCI

characteristic: INSDC center name

text: live

text: Generic

text: missing

text: No

text: POS

text: missing

text: Homo sapiens

text: CC

text: frozen breast tumors

text: breast tumors

text: Breast tumors, 14-9520


text: LHC, CCR, NCI

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: missing

text: No

text: NEG

text: missing

text: Homo sapiens

text: CC

text: frozen breast tumors

text: breast tumors

text: Breast tumors, 13-9255


text: LHC, CCR, NCI

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: missing

text: Yes

text: I

text: NEG

text: missing

text: Homo sapiens

text: AA

text: frozen breast tumors

text: breast tumors

text: Breast tumors, 12-9246


text: LHC, CCR, NCI

text: live

text: Generic

characteristic: NCBI submission package

characteristic: age

text: missing

text: Yes

text: II

text: NEG

text: missing

text: Homo sapiens

text: CC

text: frozen breast tumors

text: breast tumors

text: Breast tumors, 10-8254


text: LHC, CCR, NCI

text: live

text: Generic

text: missing

text: No

characteristic: diabetes info

characteristic: disease grade

text: POS

text: missing

text: Homo sapiens

text: CC

text: frozen breast tumors

text: breast tumors

text: Breast tumors, 8-8142


text: LHC, CCR, NCI

text: live

text: Generic

text: missing

text: No

text: NEG

characteristic: er status

text: missing

text: Homo sapiens

text: CC

text: frozen breast tumors

text: breast tumors

text: Breast tumors, 7-8126


text: LHC, CCR, NCI

text: live

text: Generic

text: missing

text: Yes

text: II

characteristic: diabetes type

text: NEG

text: missing

text: Homo sapiens

characteristic: organism

text: AA

text: frozen breast tumors

text: breast tumors

text: Breast tumors, 6-7553


text: LHC, CCR, NCI

text: live

text: Generic

text: missing

text: Yes

text: II

text: POS

text: missing

text: Homo sapiens

text: CC

characteristic: race

text: frozen breast tumors

text: breast tumors

characteristic: tissue

text: Breast tumors, 5-6335


text: LHC, CCR, NCI

text: live

text: Generic

characteristic: NCBI submission model

text: missing

text: Yes

text: II

text: POS

text: missing

text: Homo sapiens

text: AA

text: frozen breast tumors

text: breast tumors

text: Breast tumors, 4-6076

characteristic: title


characteristic: External Id

text: LHC, CCR, NCI

text: live

text: Generic

characteristic: SRA accession

text: missing

text: Yes

text: II

text: POS

text: missing

text: Homo sapiens

text: AA

text: frozen breast tumors

text: breast tumors

text: Breast tumors, 3-4663


text: LHC, CCR, NCI

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: missing

text: Yes

text: II

text: NEG

text: missing

text: Homo sapiens

text: AA

text: frozen breast tumors

text: breast tumors

text: Breast tumors, 2-3279


text: LHC, CCR, NCI

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: missing

text: No

text: NEG

text: missing

text: Homo sapiens

text: AA

text: frozen breast tumors

text: breast tumors

text: Breast tumors, 1-3275


text: Linnaeus University

text: live

characteristic: INSDC status

text: Invertebrate

characteristic: NCBI submission package

text: adult

text: not applicable

characteristic: breed

text: Daniela Polic

text: adippe morph

characteristic: description

text: Sweden: Almhult, Dio

text: not applicable

characteristic: isolate

text: not collected

text: Fabriciana adippe

text: male

characteristic: sex

text: thorax

text: Invertebrate sample from Fabriciana adippe


text: Linnaeus University

text: live

text: Invertebrate

text: adult

characteristic: age

text: not applicable

text: Daniela Polic

text: adippe morph

text: Sweden: Almhult, Dio

text: not applicable

text: not collected

text: Fabriciana adippe

characteristic: organism

text: female

text: thorax


text: Linnaeus University

text: live

text: Invertebrate

text: adult

text: not applicable

text: Daniela Polic

text: cleodoxa morph

text: Sweden: Almhult, Dio

text: not applicable

text: not collected

text: Fabriciana adippe

text: female

text: thorax

characteristic: tissue


text: Linnaeus University

text: live

text: Invertebrate

characteristic: NCBI submission model

text: adult

text: not applicable

text: Daniela Polic

text: cleodoxa morph

text: Sweden: Almhult, Dio

text: not applicable

text: not collected

text: Fabriciana adippe

text: male

text: thorax


text: Linnaeus University

text: live

text: Invertebrate

text: adult

text: not applicable

text: Markus Franzen

text: adippe morph

text: Sweden: Oland, Borgholm, Nabbelund

text: not applicable

text: not collected

text: Fabriciana adippe

text: male

text: thorax

characteristic: title


characteristic: External Id

text: Linnaeus University

text: live

text: Invertebrate

text: adult

text: not applicable

text: Markus Franzen

text: cleodoxa morph

text: Sweden: Oland, Borgholm, Nabbelund

text: not applicable

text: not collected

text: Fabriciana adippe

text: male

text: thorax


text: Linnaeus University

text: live

text: Invertebrate

characteristic: SRA accession

text: adult

text: not applicable

text: Markus Franzen

text: adippe morph

text: Sweden: Oland, Borgholm, Nabbelund

text: not applicable

text: not collected

text: Fabriciana adippe

text: female

text: thorax


text: Linnaeus University

characteristic: INSDC center name

text: live

text: Invertebrate

text: adult

text: not applicable

text: Markus Franzen

text: adippe morph

text: Sweden: Gotland, Slite, Laxare

text: not applicable

text: not collected

text: Fabriciana adippe

text: female

text: thorax


text: Linnaeus University

characteristic: INSDC first public

text: live

text: Invertebrate

text: adult

text: not applicable

text: Markus Franzen

text: adippe morph

text: Sweden: Gotland, Slite, Laxare

text: not applicable

text: not collected

text: Fabriciana adippe

text: male

text: thorax


text: Linnaeus University

characteristic: INSDC last update

text: live

text: Invertebrate

text: adult

text: not applicable

text: Markus Franzen

text: cleodoxa morph

text: Sweden: Gotland, Slite, Laxare

text: not applicable

text: not collected

text: Fabriciana adippe

text: male

text: thorax


text: Linnaeus University

characteristic: INSDC secondary accession

text: live

text: Invertebrate

text: adult

text: not applicable

text: Markus Franzen

text: cleodoxa morph

text: Sweden: Oland, Borgholm, Nabbelund

text: not applicable

text: not collected

text: Fabriciana adippe

text: female

text: thorax


name: mouse iPSC derived Prg4-RFP positive cells

text: Ehime University

text: live

characteristic: INSDC status

text: Model organism or animal

text: not applicable

text: Mus musculus

text: unknown

characteristic: strain

text: iPSC derived PRG4-mRFP positive cells

text: Model organism or animal sample from Mus musculus


text: Agriculture Agri-food Canada

text: live

text: Invertebrate

characteristic: NCBI submission package

text: missing

text: 15,000 J3

text: Canada:Sainte-Clotilde-de-Chateauguay

text: Listronotus oregonensis

characteristic: host

text: missing

text: Bradynema listronoti

text: larvae


text: Agriculture Agri-food Canada

text: live

text: Invertebrate

text: missing

text: 1 J3

characteristic: description

text: Canada:Sainte-Clotilde-de-Chateauguay

text: Listronotus oregonensis

characteristic: isolate

text: missing

text: Bradynema listronoti

text: larvae


text: Agriculture Agri-food Canada

text: live

text: Invertebrate

characteristic: age

text: missing

text: 50 eggs

text: Canada:Sainte-Clotilde-de-Chateauguay

text: Listronotus oregonensis

text: missing

text: Bradynema listronoti

text: larvae


text: Agriculture Agri-food Canada

text: live

text: Invertebrate

text: missing

text: 3 J2

text: Canada:Sainte-Clotilde-de-Chateauguay

text: Listronotus oregonensis

text: missing

text: Bradynema listronoti

characteristic: organism

text: larvae


text: Agriculture Agri-food Canada

text: live

text: Invertebrate

text: missing

text: 1 J4

text: Canada:Sainte-Clotilde-de-Chateauguay

text: Listronotus oregonensis

text: missing

text: Bradynema listronoti

text: larvae

characteristic: tissue


text: Richter Lab, Program in Molecular Medicine, University of Massachusetts Medical School

text: live

text: Generic

characteristic: NCBI submission model

characteristic: cell line

text: Neuroblastoma

characteristic: cell type

text: missing

text: missing

text: Mus musculus

text: N2a, siFmr1, rep3

characteristic: treatment


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

characteristic: SRA accession

text: Neuroblastoma

text: missing

text: missing

text: Mus musculus

text: N2a, siFmr1, rep2

characteristic: title


characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Neuroblastoma

text: missing

text: missing

text: Mus musculus

text: N2a, siFmr1, rep1


text: live

text: Generic

characteristic: NCBI submission package

text: Neuroblastoma

text: missing

text: missing

text: Mus musculus

text: N2a, siNT, rep2

text: siNT


text: live

text: Generic

text: Neuroblastoma

text: missing

text: missing

text: Mus musculus

text: N2a, siNT, rep1

text: siNT


text: live

text: Generic

text: missing

text: Fmr1 KO

characteristic: genotype

text: missing

text: Mus musculus

text: Testis

text: Testis

text: Testis, Fmr1 KO, rep3


text: live

text: Generic

text: missing

text: Fmr1 KO

text: missing

text: Mus musculus

text: Testis

text: Testis

text: Testis, Fmr1 KO, rep2


text: live

text: Generic

text: missing

text: Fmr1 KO

text: missing

text: Mus musculus

text: Testis

text: Testis

text: Testis, Fmr1 KO, rep1


text: live

text: Generic

text: missing

text: WT

text: missing

text: Mus musculus

text: Testis

text: Testis

text: Testis, WT, rep3


text: live

text: Generic

text: missing

text: WT

text: missing

text: Mus musculus

text: Testis

text: Testis

text: Testis, WT, rep2


text: live

text: Generic

text: missing

text: WT

text: missing

text: Mus musculus

text: Testis

text: Testis

text: Testis, WT, rep1


text: live

text: Generic

text: missing

text: Fmr1 KO

text: missing

text: Mus musculus

text: Muscle

text: Muscle

text: Muscle, Fmr1 KO, rep3


text: live

text: Generic

text: missing

text: Fmr1 KO

text: missing

text: Mus musculus

text: Muscle

text: Muscle

text: Muscle, Fmr1 KO, rep2


text: live

text: Generic

text: missing

text: Fmr1 KO

text: missing

text: Mus musculus

text: Muscle

text: Muscle

text: Muscle, Fmr1 KO, rep1


text: live

text: Generic

text: missing

text: WT

text: missing

text: Mus musculus

text: Muscle

text: Muscle

text: Muscle, WT, rep3


text: live

text: Generic

text: missing

text: WT

text: missing

text: Mus musculus

text: Muscle

text: Muscle

text: Muscle, WT, rep2


text: live

text: Generic

text: missing

text: WT

text: missing

text: Mus musculus

text: Muscle

text: Muscle

text: Muscle, WT, rep1


text: live

text: Generic

text: missing

text: Fmr1 KO

text: missing

text: Mus musculus

text: Liver

text: Liver

text: Liver, Fmr1 KO, rep3


text: live

text: Generic

text: missing

text: Fmr1 KO

text: missing

text: Mus musculus

text: Liver

text: Liver

text: Liver, Fmr1 KO, rep2


text: live

text: Generic

text: missing

text: Fmr1 KO

text: missing

text: Mus musculus

text: Liver

text: Liver

text: Liver, Fmr1 KO, rep1


text: live

text: Generic

text: missing

text: WT

text: missing

text: Mus musculus

text: Liver

text: Liver

text: Liver, WT, rep3


text: live

text: Generic

text: missing

text: WT

text: missing

text: Mus musculus

text: Liver

text: Liver

text: Liver, WT, rep2


text: live

text: Generic

text: missing

text: WT

text: missing

text: Mus musculus

text: Liver

text: Liver

text: Liver, WT, rep1


text: live

text: Generic

text: missing

text: Fmr1 KO

text: missing

text: Mus musculus

text: Cerebellum

text: Cerebellum

text: Cerebellum, Fmr1 KO, rep3


text: live

text: Generic

text: missing

text: Fmr1 KO

text: missing

text: Mus musculus

text: Cerebellum

text: Cerebellum

text: Cerebellum, Fmr1 KO, rep2


text: live

text: Generic

text: missing

text: Fmr1 KO

text: missing

text: Mus musculus

text: Cerebellum

text: Cerebellum

text: Cerebellum, Fmr1 KO, rep1


text: live

text: Generic

text: missing

text: WT

text: missing

text: Mus musculus

text: Cerebellum

text: Cerebellum

text: Cerebellum, WT, rep3


text: live

text: Generic

text: missing

text: WT

text: missing

text: Mus musculus

text: Cerebellum

text: Cerebellum

text: Cerebellum, WT, rep2


text: live

text: Generic

text: missing

text: WT

text: missing

text: Mus musculus

text: Cerebellum

text: Cerebellum

text: Cerebellum, WT, rep1


text: live

text: Generic

text: missing

text: Fmr1 KO

text: missing

text: Mus musculus

text: Hippocampus

text: Hippocampus

text: Hippocampus, Fmr1 KO, rep3


text: live

text: Generic

text: missing

text: Fmr1 KO

text: missing

text: Mus musculus

text: Hippocampus

text: Hippocampus

text: Hippocampus, Fmr1 KO, rep2


text: live

text: Generic

text: missing

text: Fmr1 KO

text: missing

text: Mus musculus

text: Hippocampus

text: Hippocampus

text: Hippocampus, Fmr1 KO, rep1


text: live

text: Generic

text: missing

text: WT

text: missing

text: Mus musculus

text: Hippocampus

text: Hippocampus

text: Hippocampus, WT, rep3


text: live

text: Generic

text: missing

text: WT

text: missing

text: Mus musculus

text: Hippocampus

text: Hippocampus

text: Hippocampus, WT, rep2


text: live

text: Generic

text: missing

text: WT

text: missing

text: Mus musculus

text: Hippocampus

text: Hippocampus

text: Hippocampus, WT, rep1


text: live

text: Generic

text: missing

text: Fmr1 KO

text: missing

text: Mus musculus

text: Cortex

text: Cortex

text: Cortex, Fmr1 KO, rep3


text: live

text: Generic

text: missing

text: Fmr1 KO

text: missing

text: Mus musculus

text: Cortex

text: Cortex

text: Cortex, Fmr1 KO, rep2


text: live

text: Generic

text: missing

text: Fmr1 KO

text: missing

text: Mus musculus

text: Cortex

text: Cortex

text: Cortex, Fmr1 KO, rep1


text: live

text: Generic

text: missing

text: WT

text: missing

text: Mus musculus

text: Cortex

text: Cortex

text: Cortex, WT, rep3


text: live

text: Generic

text: missing

text: WT

text: missing

text: Mus musculus

text: Cortex

text: Cortex

text: Cortex, WT, rep2


text: live

text: Generic

text: missing

text: WT

text: missing

text: Mus musculus

text: Cortex

text: Cortex

text: Cortex, WT, rep1


text: Center for excellence in molecular cell science, CAS

text: live

text: Model organism or animal

text: not applicable

characteristic: age

text: Feilong Meng

text: not applicable

characteristic: breed

text: not applicable

characteristic: cultivar

text: Amplicon

characteristic: description

text: not applicable

text: not applicable

characteristic: ecotype

text: not applicable

characteristic: isolate

text: Mus musculus

text: cell culture

text: not applicable

characteristic: sex

text: not applicable

characteristic: strain

text: not applicable

text: CH12F3_Ung-/-Msh2-/-AID-/-_bisulfite_VDJ_F1_r3


characteristic: External Id

characteristic: INSDC center name

text: live

text: Model organism or animal

characteristic: NCBI submission model

text: not applicable

text: Feilong Meng

text: not applicable

text: not applicable

text: Amplicon

text: not applicable

text: not applicable

text: not applicable

text: Mus musculus

characteristic: organism

text: cell culture

text: not applicable

text: not applicable

text: not applicable

characteristic: tissue

text: CH12F3_Ung-/-Msh2-/-AID-/-_ctrl_VDJ_F2_no_bisulfite

characteristic: treatment


characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: SRA accession

text: not applicable

text: Feilong Meng

text: not applicable

text: not applicable

text: Amplicon

text: not applicable

text: not applicable

text: not applicable

text: Mus musculus

text: cell culture

text: not applicable

text: not applicable

text: not applicable

text: CH12F3_Ung-/-Msh2-/-AID-/-_bisulfite_VDJ_F2_r1

characteristic: title


text: live

text: Model organism or animal

characteristic: NCBI submission package

text: not applicable

characteristic: age

text: Feilong Meng

text: not applicable

characteristic: breed

text: not applicable

characteristic: cultivar

text: Amplicon

characteristic: description

text: not applicable

text: not applicable

characteristic: genotype

text: not applicable

text: Mus musculus

text: cell culture

text: not applicable

text: not applicable

text: not applicable

text: CH12F3_Ung-/-Msh2-/-AID-/-_bisulfite_VDJ_F2_r2


characteristic: External Id

characteristic: INSDC center name

text: live

text: Model organism or animal

text: not applicable

text: Feilong Meng

text: not applicable

text: not applicable

text: Amplicon

text: not applicable

text: not applicable

characteristic: ecotype

text: not applicable

characteristic: isolate

text: Mus musculus

text: cell culture

text: not applicable

characteristic: sex

text: not applicable

characteristic: strain

text: not applicable

text: CH12F3_Ung-/-Msh2-/-AID-/-_bisulfite_VDJ_F2_r3


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Model organism or animal

characteristic: NCBI submission model

text: not applicable

text: Feilong Meng

text: not applicable

text: not applicable

text: Amplicon

text: not applicable

text: not applicable

text: not applicable

text: Mus musculus

characteristic: organism

text: cell culture

text: not applicable

text: not applicable

text: not applicable

characteristic: tissue

text: CH12F3_Ung-/-Msh2-/-AID-/-_ctrl_SHM_25_no_bisulfite

characteristic: treatment


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission package

characteristic: SRA accession

text: not applicable

characteristic: age

text: Feilong Meng

text: not applicable

text: not applicable

text: Amplicon

text: not applicable

text: not applicable

text: not applicable

text: Mus musculus

text: cell culture

text: not applicable

text: not applicable

text: not applicable

text: CH12F3_Ung-/-Msh2-/-AID-/-_bisulfite_SHM_25_r1

characteristic: title


characteristic: External Id

characteristic: INSDC center name

text: live

text: Model organism or animal

text: not applicable

text: Feilong Meng

text: not applicable

characteristic: breed

text: not applicable

characteristic: cultivar

text: Amplicon

characteristic: description

text: not applicable

text: not applicable

characteristic: genotype

text: not applicable

text: Mus musculus

text: cell culture

text: not applicable

text: not applicable

text: not applicable

text: CH12F3_Ung-/-Msh2-/-AID-/-_bisulfite_SHM_25_r2


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Model organism or animal

text: not applicable

text: Feilong Meng

text: not applicable

text: not applicable

text: Amplicon

text: not applicable

text: not applicable

characteristic: ecotype

text: not applicable

characteristic: isolate

text: Mus musculus

text: cell culture

text: not applicable

characteristic: sex

text: not applicable

characteristic: strain

text: not applicable

text: CH12F3_Ung-/-Msh2-/-AID-/-_bisulfite_SHM_25_r3


text: University of California Riverside

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: cell line

text: Human hepatocellular carcinoma

characteristic: cell type

characteristic: chip antibody

text: missing

text: missing

text: Homo sapiens

characteristic: organism

text: HiChIP PDS rep2

text: 20uM PDS, 24hrs

characteristic: treatment


characteristic: External Id

text: University of California Riverside

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Human hepatocellular carcinoma

text: missing

text: missing

text: Homo sapiens

text: HiChIP PDS rep1

characteristic: title

text: 20uM PDS, 24hrs


text: University of California Riverside

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Human hepatocellular carcinoma

text: missing

text: missing

text: Homo sapiens

text: HiChIP Mock rep2


text: University of California Riverside

text: live

text: Generic

text: Human hepatocellular carcinoma

text: missing

text: missing

text: Homo sapiens

text: HiChIP Mock rep1


text: University of California Riverside

text: live

text: Generic

text: Human hepatocellular carcinoma

text: missing

text: wild type

characteristic: genotype

text: missing

text: Homo sapiens

text: RNA PDS rep2

text: 20uM PDS, 24hrs


text: University of California Riverside

text: live

text: Generic

text: Human hepatocellular carcinoma

text: missing

text: wild type

text: missing

text: Homo sapiens

text: RNA PDS rep1

text: 20uM PDS, 24hrs


text: University of California Riverside

text: live

text: Generic

text: Human hepatocellular carcinoma

text: missing

text: wild type

text: missing

text: Homo sapiens

text: RNA Mock rep2


text: University of California Riverside

text: live

text: Generic

text: Human hepatocellular carcinoma

text: missing

text: wild type

text: missing

text: Homo sapiens

text: RNA Mock rep1


text: Lymphocyte Development, Epigenetics section, MRC London Institute of Medical Sciences

text: live

text: Generic

text: Histone H3 (Abcam, #ab1791)

characteristic: antibody

text: Primary T cell

text: missing

characteristic: developmental stage

text: wild type

text: missing

text: Mus musculus

text: thymus

characteristic: strain

text: thymus

characteristic: tissue

text: CD69negDP_WT_H3_ChIPseq, biol rep 2


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Histone H3 (Abcam, #ab1791)

characteristic: cell line

text: Primary T cell

text: missing

text: wild type

text: missing

text: Mus musculus

text: thymus

text: thymus

text: CD69negDP_WT_H3_ChIPseq, biol rep 1


text: live

text: Generic

text: Histone H3 (Abcam, #ab1791)

text: Primary T cell

characteristic: cell type

text: missing

text: wild type

text: missing

text: Mus musculus

characteristic: organism

text: thymus

text: thymus

text: CD69posCD4SP_WT_H3_ChIPseq, biol rep 2


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: Histone H3 (Abcam, #ab1791)

text: Primary T cell

text: missing

text: wild type

text: missing

text: Mus musculus

text: thymus

text: thymus

text: CD69posCD4SP_WT_H3_ChIPseq, biol rep 1


text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: H3K27ac (Active Motif, #39133)

text: Primary T cell

text: missing

text: wild type

text: missing

text: Mus musculus

text: thymus

text: thymus

text: CD69posCD4SP_WT_H3K27ac_ChIPseq, biol rep 2


characteristic: INSDC first public

text: live

text: Generic

text: H3K27ac (Active Motif, #39133)

text: Primary T cell

text: missing

text: wild type

text: missing

text: Mus musculus

text: thymus

text: thymus

text: CD69posCD4SP_WT_H3K27ac_ChIPseq, biol rep 1

characteristic: title


characteristic: INSDC last update

text: live

text: Generic

text: Primary T cell

text: missing

text: wild type

characteristic: genotype

text: missing

text: Mus musculus

text: thymus

text: thymus

text: CD69posCD4SP_WT_Input_ChIPseq, biol rep 2


text: live

text: Generic

characteristic: antibody

text: Primary T cell

text: missing

characteristic: developmental stage

text: wild type

text: missing

text: Mus musculus

text: thymus

text: thymus

text: CD69posCD4SP_WT_Input_ChIPseq, biol rep 1


text: live

text: Generic

text: T cell line, VL3-3M2

text: missing

text: CMV Enh+/+

text: missing

text: Mus musculus

characteristic: strain

characteristic: tissue


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: T cell line, VL3-3M2

text: missing

text: wild type

text: missing

text: Mus musculus


text: live

text: Generic

characteristic: NCBI submission model

text: T cell line, VL3-3M2

characteristic: cell line

text: missing

text: wild type

text: missing

text: Mus musculus

text: VL3_WT_HIC, biol rep 3


text: live

text: Generic

text: T cell line, VL3-3M2

characteristic: cell type

text: missing

text: wild type

text: missing

text: Mus musculus

characteristic: organism

text: VL3_WT_HIC, biol rep 2


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: T cell line, VL3-3M2

text: missing

text: wild type

text: missing

text: Mus musculus

text: VL3_WT_HIC, biol rep 1


text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Primary T cell

text: missing

text: CTCF-/-, Rad21-/-

text: missing

text: Mus musculus

text: thymus

text: thymus

text: CD69posCD4SP_DKO_HIC, biol rep 2


characteristic: INSDC first public

text: live

text: Generic

text: Primary T cell

text: missing

text: CTCF-/-, Rad21-/-

text: missing

text: Mus musculus

text: thymus

text: thymus

text: CD69posCD4SP_DKO_HIC, biol rep 1

characteristic: title


text: University of California, Irvine

characteristic: INSDC last update

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.human-gut

text: Keywords: GSC:MIxS;MIMS:6.0

characteristic: description

text: sequencing control

text: sequencing control

text: water

text: USA: California

characteristic: host

text: 33.47 N 117.53 W

text: synthetic metagenome

text: MIMS Environmental/Metagenome sample from synthetic metagenome


text: University of California, Irvine

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.human-gut

text: Keywords: GSC:MIxS;MIMS:6.0

text: human gut

text: feces

text: feces

text: USA: California

text: Homo sapiens

text: 33.47 N 117.53 W

text: gut metagenome

text: MIMS Environmental/Metagenome sample from gut metagenome


text: Westlake University

text: live

text: Generic

text: HSC

text: Mus musculus

text: AGM

text: AGM


text: Westlake University

text: live

text: Generic

text: HSC

text: Mus musculus

text: Bone Marrow

text: Bone Marrow


text: Westlake University

text: live

text: Generic

text: HSC

text: Mus musculus

text: Fetal Liver

text: Fetal Liver


text: Microbiology and Immunology, University of British Columbia

text: live

text: Generic

text: Additional metadata is accessible at the BQC19 Biobank: https://en.quebeccovidbiobank.ca/acceder-au-materiel-de-la-bqc19

characteristic: additional metadata

text: three

characteristic: batch

text: missing

characteristic: disease state

text: Cluster 2

characteristic: endotype

text: missing

text: Hospital

characteristic: location

text: Homo sapiens

text: Whole Blood

text: Whole Blood

text: sample159, Cluster 2


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: three

text: missing

text: Cluster 1

text: missing

text: Hospital

text: Homo sapiens

text: Whole Blood

text: Whole Blood

characteristic: tissue

text: sample158, Cluster 1


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: three

text: missing

text: Cluster 2

text: missing

text: Hospital

text: Homo sapiens

characteristic: organism

text: Whole Blood

text: Whole Blood

text: sample157, Cluster 2


characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: three

text: missing

text: Cluster 3

text: missing

text: Hospital

text: Homo sapiens

text: Whole Blood

text: Whole Blood

text: sample156, Cluster 3


characteristic: INSDC last update

text: live

text: Generic

text: three

text: missing

text: Cluster 2

text: missing

text: Hospital

text: Homo sapiens

text: Whole Blood

text: Whole Blood

text: sample155, Cluster 2

characteristic: title


text: live

text: Generic

characteristic: additional metadata

text: three

text: missing

text: Cluster 3

text: missing

text: Hospital

text: Homo sapiens

text: Whole Blood

text: Whole Blood

text: sample154, Cluster 3


text: live

text: Generic

text: three

characteristic: batch

text: missing

text: Cluster 1

text: missing

text: Hospital

text: Homo sapiens

text: Whole Blood

text: Whole Blood

text: sample153, Cluster 1


text: live

text: Generic

text: three

text: missing

characteristic: disease state

text: Cluster 2

text: missing

text: Discharged

text: Homo sapiens

text: Whole Blood

text: Whole Blood

text: sample152, Cluster 2


text: live

text: Generic

text: three

text: missing

text: Cluster 1

characteristic: endotype

text: missing

text: Discharged

text: Homo sapiens

text: Whole Blood

text: Whole Blood

text: sample151, Cluster 1


text: live

text: Generic

text: three

text: missing

text: Cluster 2

text: missing

text: Discharged

characteristic: location

text: Homo sapiens

text: Whole Blood

text: Whole Blood

text: sample150, Cluster 2


characteristic: INSDC secondary accession

text: live

text: Generic

text: three

text: missing

text: Cluster 3

text: missing

text: Discharged

text: Homo sapiens

text: Whole Blood

text: Whole Blood

text: sample149, Cluster 3


text: live

characteristic: INSDC status

text: Generic

text: three

text: missing

text: Cluster 2

text: missing

text: Discharged

text: Homo sapiens

text: Whole Blood

text: Whole Blood

text: sample148, Cluster 2


text: live

text: Generic

characteristic: NCBI submission model

text: three

text: missing

text: Cluster 3

text: missing

text: Discharged

text: Homo sapiens

text: Whole Blood

text: Whole Blood

text: sample147, Cluster 3


text: live

text: Generic

text: three

text: missing

text: Cluster 1

text: missing

text: Discharged

text: Homo sapiens

text: Whole Blood

text: Whole Blood

characteristic: tissue

text: sample146, Cluster 1


characteristic: External Id

text: live

text: Generic

text: three

text: missing

text: Cluster 2

text: missing

text: Discharged

text: Homo sapiens

text: Whole Blood

text: Whole Blood

text: sample145, Cluster 2


characteristic: INSDC center name

text: live

text: Generic

text: two

text: missing

text: Cluster 1

text: missing

text: Discharged

text: Homo sapiens

text: Whole Blood

text: Whole Blood

text: sample144, Cluster 1


text: live

text: Generic

text: two

text: missing

text: Cluster 2

text: missing

text: Discharged

text: Homo sapiens

characteristic: organism

text: Whole Blood

text: Whole Blood

text: sample143, Cluster 2


characteristic: INSDC first public

text: live

text: Generic

text: two

text: missing

text: Cluster 1

text: missing

text: Discharged

text: Homo sapiens

text: Whole Blood

text: Whole Blood

text: sample142, Cluster 1


text: live

text: Generic

characteristic: NCBI submission package

text: two

text: missing

text: Cluster 1

text: missing

text: Discharged

text: Homo sapiens

text: Whole Blood

text: Whole Blood

text: sample141, Cluster 1


text: live

text: Generic

characteristic: SRA accession

text: two

text: missing

text: Cluster 2

text: missing

text: Discharged

text: Homo sapiens

text: Whole Blood

text: Whole Blood

text: sample140, Cluster 2


characteristic: INSDC last update

text: live

text: Generic

text: two

text: missing

text: Cluster 3

text: missing

text: Discharged

text: Homo sapiens

text: Whole Blood

text: Whole Blood

text: sample139, Cluster 3


text: live

text: Generic

text: one

text: missing

text: Cluster 3

text: missing

text: Discharged

text: Homo sapiens

text: Whole Blood

text: Whole Blood

text: sample138, Cluster 3

characteristic: title


text: live

text: Generic

characteristic: additional metadata

text: one

text: missing

text: Cluster 3

text: missing

text: Discharged

text: Homo sapiens

text: Whole Blood

text: Whole Blood

text: sample137, Cluster 3


text: live

text: Generic

text: one

characteristic: batch

text: missing

text: Cluster 1

text: missing

text: Discharged

text: Homo sapiens

text: Whole Blood

text: Whole Blood

text: sample136, Cluster 1


text: live

text: Generic

text: one

text: missing

characteristic: disease state

text: Cluster 1

text: missing

text: Discharged

text: Homo sapiens

text: Whole Blood

text: Whole Blood

text: sample135, Cluster 1


text: live

text: Generic

text: one

text: missing

text: Cluster 1

characteristic: endotype

text: missing

text: Discharged

text: Homo sapiens

text: Whole Blood

text: Whole Blood

text: sample134, Cluster 1


text: live

text: Generic

text: one

text: missing

text: Cluster 1

text: missing

text: Discharged

characteristic: location

text: Homo sapiens

text: Whole Blood

text: Whole Blood

text: sample133, Cluster 1


characteristic: INSDC secondary accession

text: live

text: Generic

text: one

text: missing

text: Cluster 1

text: missing

text: Discharged

text: Homo sapiens

text: Whole Blood

text: Whole Blood

text: sample132, Cluster 1


text: live

characteristic: INSDC status

text: Generic

text: one

text: missing

text: Cluster 1

text: missing

text: Discharged

text: Homo sapiens

text: Whole Blood

text: Whole Blood

text: sample131, Cluster 1


text: live

text: Generic

characteristic: NCBI submission model

text: one

text: missing

text: Cluster 2

text: missing

text: Discharged

text: Homo sapiens

text: Whole Blood

text: Whole Blood

text: sample130, Cluster 2


text: live

text: Generic

text: two

text: missing

text: Cluster 1

text: missing

text: Discharged

text: Homo sapiens

text: Whole Blood

text: Whole Blood

characteristic: tissue

text: sample129, Cluster 1


characteristic: External Id

text: live

text: Generic

text: one

text: missing

text: Cluster 3

text: missing

text: Hospital

text: Homo sapiens

text: Whole Blood

text: Whole Blood

text: sample128, Cluster 3


characteristic: INSDC center name

text: live

text: Generic

text: one

text: missing

text: Cluster 1

text: missing

text: Hospital

text: Homo sapiens

text: Whole Blood

text: Whole Blood

text: sample127, Cluster 1


text: live

text: Generic

text: one

text: missing

text: Cluster 2

text: missing

text: Hospital

text: Homo sapiens

characteristic: organism

text: Whole Blood

text: Whole Blood

text: sample126, Cluster 2


characteristic: INSDC first public

text: live

text: Generic

text: two

text: missing

text: Cluster 1

text: missing

text: Hospital

text: Homo sapiens

text: Whole Blood

text: Whole Blood

text: sample125, Cluster 1


text: Barkai Lab, Molecular Genetics, Weizmann Institute of Science

text: live

text: Generic

characteristic: NCBI submission package

text: missing

text: missing

text: Saccharomyces cerevisiae

characteristic: strain


bvRMA01 adaptive sampling

text: Baylor College of Medicine

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

text: Adaptive sampling was performed on the same genomic DNA used in the GCA_023035835.1 B. venezuelensis RMA01 genome assembly. Adaptive sampling was performed using a fasta file containg lp35 (CP073229.1) and lp37 (CP073230.1) for read enrichment.

characteristic: description

text: Brazil: Riachao, Maranhaeo Sate

text: Alectorobius rudis

characteristic: host

text: mouse blood from experimental transmission feeding

text: Borrelia venezuelensis

text: genomic DNA


bt91E135 adaptive sampling

text: Baylor College of Medicine

text: live

text: Microbe, viral or environmental

text: The same genomic DNA used to generate the GCA_023035855.1 B. turicatae 91E135 assembly was used in this experiment for adaptive sampling.

text: USA: Texas

text: Ornithodoros turicata

text: lab mouse blood

text: Borrelia turicatae 91E135

text: genomic DNA

characteristic: title


name: Animal sample from Pterocnemia pennata (Southern Darwins Lesser Rhea) for VGP genome, bPtePen1

text: live

text: Model organism or animal

text: Oliver Ryder, San Diego Zoo Global

text: San Diego Zoo

text: Darwin's rhea or the lesser rhea (Pterocnemia pennata) is a large flightless bird, the smaller of the two extant species of rheas. It is found in the Altiplano and Patagonia in South America (Wikipedia entry). Two alternative scientific names have been used for this species, Pterocnemia pennata and Rhea pennata. This sample is from a male collected in San Diego Zoo, California, coordinated by Oliver Ryder, and used to generate a high-quality reference for the Vertebrate Genomes Project (VGP). Sequencing and genome assembly were conducted in the Vertebrate Genome Lab at the Rockefeller University, led by Olivier Fedrigo and Erich D. Jarvis.

text: unkown

text: USA: San Diego Zoo

characteristic: isolate

text: 32.73547391 N 117.14903527 W

text: Rhea pennata

text: male

characteristic: sex

text: heart muscle


text: Northwest A&F University

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

text: China:Yangling

text: Mus musculus

text: Mus musculus cecum chyme

text: missing

text: mouse metagenome

text: cecum chyme

text: Metagenome or environmental sample from mouse metagenome


Tca-CN

text: Institute of Plant Protection, Chinese Academy of Agricultural Sciences

text: live

characteristic: INSDC status

text: Pathogen.env

text: Li Gao

text: China: Henan

text: wheat

text: 33 N 111 E

text: Tilletia caries

text: Pathogen: environmental/food/other sample from Tilletia caries


Tco-CN

text: live

text: Pathogen.env

characteristic: NCBI submission model

text: Blair Goates

text: USA: Utah

text: wheat

text: 37 N 109 W

text: Tilletia controversa

text: Pathogen: environmental/food/other sample from Tilletia controversa


Tla-CN

text: live

text: Pathogen.env

text: Li Gao

text: China: Henan

text: wheat

text: 33 N 111 E

text: Tilletia laevis

text: Pathogen: environmental/food/other sample from Tilletia laevis


text: Cancer Resistance, Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences

text: live

text: Generic

text: Normal human primary stromal cells

characteristic: cell line

text: Stromal

characteristic: cell type

text: missing

text: wild type

characteristic: genotype

text: missing

text: Homo sapiens

text: Human prostate

text: Human prostate

characteristic: tissue

text: Bleomycin plus PDKIN

characteristic: treatment


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission package

text: Normal human primary stromal cells

text: Stromal

text: missing

text: wild type

text: missing

text: Homo sapiens

characteristic: organism

text: Human prostate

text: Human prostate

text: Bleomycin


characteristic: INSDC last update

text: live

text: Generic

characteristic: SRA accession

text: Normal human primary stromal cells

text: Stromal

text: missing

text: wild type

text: missing

text: Homo sapiens

text: Human prostate

text: Human prostate


text: Westlake University

text: live

text: Generic

text: HSC

text: Mus musculus

text: AGM

text: AGM

characteristic: title


text: Westlake University

text: live

text: Generic

text: HSC

text: Mus musculus

text: Bone Marrow

text: Bone Marrow


text: Westlake University

text: live

text: Generic

text: HSC

text: Mus musculus

text: Bone Marrow

text: Bone Marrow

text: Camellia_BoneMarrow-HSC_LL731_P1_DNA_A10


text: Westlake University

text: live

text: Generic

text: HSC

text: Mus musculus

text: Bone Marrow

text: Bone Marrow

text: Camellia_BoneMarrow-HSC_LL731_P1_DNA_A11


text: Westlake University

text: live

text: Generic

text: HSC

text: Mus musculus

text: Bone Marrow

text: Bone Marrow

text: Camellia_BoneMarrow-HSC_LL731_P1_DNA_A12


text: Westlake University

text: live

text: Generic

text: HSC

text: Mus musculus

text: Bone Marrow

text: Bone Marrow

text: Camellia_BoneMarrow-HSC_LL731_P1_DNA_B10


text: Westlake University

text: live

text: Generic

text: HSC

text: Mus musculus

text: Bone Marrow

text: Bone Marrow

text: Camellia_BoneMarrow-HSC_LL731_P1_DNA_B11


text: Westlake University

text: live

text: Generic

text: HSC

text: Mus musculus

text: Bone Marrow

text: Bone Marrow

text: Camellia_BoneMarrow-HSC_LL731_P1_DNA_B12


text: Westlake University

text: live

text: Generic

text: HSC

text: Mus musculus

text: Bone Marrow

text: Bone Marrow

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