text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Mexico City

text: hCoV-19/Mexico/CMX_LANGEBIO_IMSS_2880/2021

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


status: PUBLIC

characteristic: External Id

text: Instituto de Biotecnologia

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: not collected

tag: attribute

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

characteristic: description

text: not collected

text: not collected

text: Mexico: Veracruz

text: hCoV-19/Mexico/VER_LANGEBIO_IMSS_2951/2021

text: Homo sapiens

characteristic: host

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

characteristic: isolate

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: Consorcio Mexicano de Vigilancia Genomica (CoViGen-Mex). Julio Elias Alvarado-Yaah, Carlos F. Arias, Santiago Avila-Rios, Victor Hugo Borja-Aburto, Celia Boukadida, Juan Bautista Chale-Dzul , Jose Antonio Enciso-Moreno, Gloria Elena Espinoza-Ayala, Fernando Fontove-Herrera, Concepcion Grajales-Muniz, Ricardo Grande, Alfredo Herrera-Estrella, Carla Ivon Herrera-Najera, Pavel Isa, Brenda Irasema Maldonado-Meza, Bernardo Martinez-Miguel, Margarita Matias-Florentino, Maria Guadalupe de Jesus Mireles-Rivera, Gloria Maria Molina-Salinas, Hector Montoya-Fuentes, Jose Esteban Munoz-Medina, Jose de Jesus Nunez-Contreras, Alicia Ocana-Mondragon, Luis Alberto Ochoa-Carrera, Hector Esteban Paz-Juarez, Francisco Pulido, Helen Haydee Fernanda Ramirez-Plascencia, Angel Gustavo Salas-Lais, Jorge Ivan Salinal-Nevarez, Alejandro Sanchez-Flores, Clara Esperanza Santacruz-Tinoco, Maria Guadalupe Santiago-Mauricio, Nelly Selem-Mojica, Blanca Taboada, Gloria Vazquez

characteristic: title

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Jalisco

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Sonora

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Nuevo Leon

text: hCoV-19/Mexico/NLE_LANGEBIO_IMSS_3684/2021

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Coahuila

text: hCoV-19/Mexico/COA_LANGEBIO_IMSS_3696/2021

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Coahuila

text: hCoV-19/Mexico/COA_LANGEBIO_IMSS_3706/2021

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Nuevo Leon

text: hCoV-19/Mexico/NLE_LANGEBIO_IMSS_3708/2021

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Baja California

text: hCoV-19/Mexico/BCN_LANGEBIO_IMSS_3922/2021

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Pharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Veracruz

text: hCoV-19/Mexico/VER_LANGEBIO_IMSS_3932/2021

text: Homo sapiens

text: mucus

text: Pharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Pharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: State of Mexico

text: hCoV-19/Mexico/MEX_LANGEBIO_IMSS_4388/2021

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Morelos

text: hCoV-19/Mexico/MOR_LANGEBIO_IMSS_4400/2021

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Baja California

text: hCoV-19/Mexico/BCN_LANGEBIO_IMSS_4207/2021

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Sinaloa

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Hidalgo

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Mexico City

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Pharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Hidalgo

text: Homo sapiens

text: mucus

text: Pharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Pharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Jalisco

text: hCoV-19/Mexico/JAL_LANGEBIO_IMSS_5084/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: Consorcio Mexicano de Vigilancia Genomica (CoViGen-Mex). Julio Elías Alvarado-Yaah, Carlos F. Arias, Eduardo Becerril-Vargas, David Alejandro Cabrera-Gaytán, Guillermo Corona Armenta, Cristóbal Cháidez-Quiróz, Hermilo Domínguez-Zarate, Julissa Enciso-Ibarra, Gloria Espinosa-Ayala, Daniel Fregoso-Rueda, Alejandra García-Gasca, Rodrigo García-López, Bruno Gómez-Gil, Jean Pierre González, Irvin González-López, Ricardo Grande, Alfredo Herrera-Estrella, Carla Ivón Herrera-Nájera, Beatriz Jiménez-Moraila, Daniel Lira-Morales, Brenda Irasema Maldonado-Meza, María Guadalupe Márquez-Rosales, Julio César Martínez-Álvarez, Bernardo Martínez-Miguel, Gabriela Bibiana Martínez-Morales, Célida Martínez-Rodríguez, Fidencio Mejía-Nepomuceno, María Guadalupe de Jesús Mireles-Rivera, Gloria María Molina-Salinas, Héctor Montoya-Fuentes, Mario Mújica-Sánchez, José Esteban Muñoz-Medina, José de Jesús Nuñez-Contreras, Ilse Patricia Salinas-Peralta, Bruno Tonatiuh Rivas-Santiago, Mauricio Rosales-Rivera, Jorge Salas-Hernández, Ángel Gustavo Salas-Lais, Alejandro Sánchez-Flores, Clara Esperanza Santacruz-Tinoco, Nelly Sélem-Mojica, Blanca Taboada, Gloria Vázquez, Joel Armando Vázquez-Pérez.

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Jalisco

text: hCoV-19/Mexico/JAL_LANGEBIO_IMSS_5089/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Tamaulipas

text: hCoV-19/Mexico/TAM_LANGEBIO_IMSS_4910/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Guanajuato

text: hCoV-19/Mexico/GUA_LANGEBIO_IMSS_5162/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Durango

text: hCoV-19/Mexico/DUR_LANGEBIO_IMSS_4977/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Chiapas

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: Severe acute respiratory syndrome coronavirus 2

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Zacatecas

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Guanajuato

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Jalisco

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Veracruz

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Guerrero

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Veracruz

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Mexico City

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Mexico City

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: State of Mexico

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Baja California

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Sinaloa

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Guanajuato

text: hCoV-19/Mexico/GUA_LANGEBIO_IMSS_6313/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Michoacan

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Mexico City

text: hCoV-19/Mexico/CMX_CIAD-IMSS_202201050197/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Yucatan

text: hCoV-19/Mexico/YUC_LANGEBIO_IMSS_6556/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Mexico City

text: hCoV-19/Mexico/CMX_LANGEBIO_IMSS_6463/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: State of Mexico

text: hCoV-19/Mexico/MEX_LANGEBIO_IMSS_6465/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Sinaloa

text: hCoV-19/Mexico/SIN_LANGEBIO_IMSS_6475/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Quintana Roo

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: State of Mexico

text: hCoV-19/Mexico/MEX_CIAD-IMSS_202201058523/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Quintana Roo

text: hCoV-19/Mexico/ROO_LANGEBIO_IMSS_9074/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Baja California

text: hCoV-19/Mexico/BCN_LANGEBIO_IMSS_8814/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: State of Mexico

text: hCoV-19/Mexico/MEX_LANGEBIO_IMSS_8818/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Mexico City

text: hCoV-19/Mexico/CMX_LANGEBIO_IMSS_8821/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Mexico City

text: hCoV-19/Mexico/CMX_LANGEBIO_IMSS_8822/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: Consorcio Mexicano de Vigilancia Genomica (CoViGen-Mex). Julio Elías Alvarado-Yaah, Carlos F. Arias, Eduardo Becerril-Vargas, David Alejandro Cabrera-Gaytán, Guillermo Corona Armenta, Cristóbal Cháidez-Quiróz, Hermilo Domínguez-Zarate, Julissa Enciso-Ibarra, Gloria Espinosa-Ayala, Daniel Fregoso-Rueda, Alejandra García-Gasca, Rodrigo García-López, Bruno Gómez-Gil, Jean Pierre González, Irvin González-López, Ricardo Grande, Alfredo Herrera-Estrella, Carla Ivón Herrera-Nájera, Beatriz Jiménez-Moraila, Daniel Lira-Morales, Brenda Irasema Maldonado-Meza, María Guadalupe Márquez-Rosales, Julio César Martínez-Álvarez, Bernardo Martínez-Miguel, Gabriela Bibiana Martínez-Morales, Célida Martínez-Rodríguez, Fidencio Mejía-Nepomuceno, María Guadalupe de Jesús Mireles-Rivera, Gloria María Molina-Salinas, Héctor Montoya-Fuentes, Mario Mújica-Sánchez, José Esteban Muñoz-Medina, José de Jesús Nuñez-Contreras, Ilse Patricia Salinas-Peralta, Bruno Tonatiuh Rivas-Santiago, Mauricio Rosales-Rivera, Jorge Salas-Hernández, Ángel Gustavo Salas-Lais, Alejandro Sánchez-Flores, Clara Esperanza Santacruz-Tinoco, Nelly Sélem-Mojica, Blanca Taboada, Gloria Vázquez, Joel Armando Vázquez-Pérez.

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Mexico City

text: hCoV-19/Mexico/CMX_LANGEBIO_IMSS_8823/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Baja California Sur

text: hCoV-19/Mexico/BCS_LANGEBIO_IMSS_8830/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Baja California Sur

text: hCoV-19/Mexico/BCS_LANGEBIO_IMSS_8831/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Baja California Sur

text: hCoV-19/Mexico/BCS_LANGEBIO_IMSS_8832/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: Severe acute respiratory syndrome coronavirus 2

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Baja California Sur

text: hCoV-19/Mexico/BCS_LANGEBIO_IMSS_8833/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Baja California Sur

text: hCoV-19/Mexico/BCS_LANGEBIO_IMSS_8834/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Mexico City

text: hCoV-19/Mexico/CMX_LANGEBIO_IMSS_8837/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Mexico City

text: hCoV-19/Mexico/CMX_LANGEBIO_IMSS_8844/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Mexico City

text: hCoV-19/Mexico/CMX_LANGEBIO_IMSS_8849/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Mexico City

text: hCoV-19/Mexico/CMX_LANGEBIO_IMSS_8858/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Baja California Sur

text: hCoV-19/Mexico/BCS_LANGEBIO_IMSS_8869/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: State of Mexico

text: hCoV-19/Mexico/MEX_LANGEBIO_IMSS_8892/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: State of Mexico

text: hCoV-19/Mexico/MEX_LANGEBIO_IMSS_8902/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: State of Mexico

text: hCoV-19/Mexico/MEX_LANGEBIO_IMSS_8909/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Nuevo Leon

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Veracruz

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Pharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Puebla

text: Homo sapiens

text: mucus

text: Pharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Pharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Jalisco

text: hCoV-19/Mexico/JAL_CIAD-IMSS_202201022752/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Tamaulipas

text: hCoV-19/Mexico/TAM_CIAD-IMSS_202201026564/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: Consorcio Mexicano de Vigilancia Genomica (CoViGen-Mex). Julio Elías Alvarado-Yaah, Carlos F. Arias, Eduardo Becerril-Vargas, David Alejandro Cabrera-Gaytán, Guillermo Corona Armenta, Cristóbal Cháidez-Quiróz, Hermilo Domínguez-Zarate, Julissa Enciso-Ibarra, Gloria Espinosa-Ayala, Daniel Fregoso-Rueda, Alejandra García-Gasca, Rodrigo García-López, Bruno Gómez-Gil, Jean Pierre González, Irvin González-López, Ricardo Grande, Alfredo Herrera-Estrella, Carla Ivón Herrera-Nájera, Beatriz Jiménez-Moraila, Daniel Lira-Morales, Brenda Irasema Maldonado-Meza, María Guadalupe Márquez-Rosales, Julio César Martínez-Álvarez, Bernardo Martínez-Miguel, Gabriela Bibiana Martínez-Morales, Célida Martínez-Rodríguez, Fidencio Mejía-Nepomuceno, María Guadalupe de Jesús Mireles-Rivera, Gloria María Molina-Salinas, Héctor Montoya-Fuentes, Mario Mújica-Sánchez, José Esteban Muñoz-Medina, José de Jesús Nuñez-Contreras, Ilse Patricia Salinas-Peralta, Bruno Tonatiuh Rivas-Santiago, Mauricio Rosales-Rivera, Jorge Salas-Hernández, Ángel Gustavo Salas-Lais, Alejandro Sánchez-Flores, Clara Esperanza Santacruz-Tinoco, Nelly Sélem-Mojica, Blanca Taboada, Gloria Vázquez, Joel Armando Vázquez-Pérez.

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: State of Mexico

text: hCoV-19/Mexico/MEX_CIAD-IMSS_202201062450/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Guerrero

text: hCoV-19/Mexico/GRO_CIAD-IMSS_202201064042/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Yucatan

text: hCoV-19/Mexico/YUC_LANGEBIO_IMSS_9458/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Yucatan

text: hCoV-19/Mexico/YUC_LANGEBIO_IMSS_9476/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: Severe acute respiratory syndrome coronavirus 2

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Yucatan

text: hCoV-19/Mexico/YUC_LANGEBIO_IMSS_9481/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Yucatan

text: hCoV-19/Mexico/YUC_LANGEBIO_IMSS_9482/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Yucatan

text: hCoV-19/Mexico/YUC_LANGEBIO_IMSS_9499/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Jalisco

text: hCoV-19/Mexico/JAL_LANGEBIO_IMSS_9533/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Nuevo Leon

text: hCoV-19/Mexico/NLE_LANGEBIO_IMSS_9391/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: State of Mexico

text: hCoV-19/Mexico/MEX_LANGEBIO_IMSS_9222/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Mexico City

text: hCoV-19/Mexico/CMX_LANGEBIO_IMSS_9232/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: State of Mexico

text: hCoV-19/Mexico/MEX_LANGEBIO_IMSS_9245/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Baja California

text: hCoV-19/Mexico/BCN_LANGEBIO_IMSS_9292/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Baja California

text: hCoV-19/Mexico/BCN_LANGEBIO_IMSS_9305/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Tabasco

text: hCoV-19/Mexico/TAB_CIAD-IMSS_202201011247/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Tabasco

text: hCoV-19/Mexico/TAB_CIAD-IMSS_202201011478/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: Consorcio Mexicano de Vigilancia Genomica (CoViGen-Mex). Julio Elías Alvarado-Yaah, Carlos F. Arias, Eduardo Becerril-Vargas, David Alejandro Cabrera-Gaytán, Guillermo Corona Armenta, Cristóbal Cháidez-Quiróz, Hermilo Domínguez-Zarate, Julissa Enciso-Ibarra, Gloria Espinosa-Ayala, Daniel Fregoso-Rueda, Alejandra García-Gasca, Rodrigo García-López, Bruno Gómez-Gil, Jean Pierre González, Irvin González-López, Ricardo Grande, Alfredo Herrera-Estrella, Carla Ivón Herrera-Nájera, Beatriz Jiménez-Moraila, Daniel Lira-Morales, Brenda Irasema Maldonado-Meza, María Guadalupe Márquez-Rosales, Julio César Martínez-Álvarez, Bernardo Martínez-Miguel, Gabriela Bibiana Martínez-Morales, Célida Martínez-Rodríguez, Fidencio Mejía-Nepomuceno, María Guadalupe de Jesús Mireles-Rivera, Gloria María Molina-Salinas, Héctor Montoya-Fuentes, Mario Mújica-Sánchez, José Esteban Muñoz-Medina, José de Jesús Nuñez-Contreras, Ilse Patricia Salinas-Peralta, Bruno Tonatiuh Rivas-Santiago, Mauricio Rosales-Rivera, Jorge Salas-Hernández, Ángel Gustavo Salas-Lais, Alejandro Sánchez-Flores, Clara Esperanza Santacruz-Tinoco, Nelly Sélem-Mojica, Blanca Taboada, Gloria Vázquez, Joel Armando Vázquez-Pérez.

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Queretaro

text: hCoV-19/Mexico/QUE_CIAD-IMSS_202201066065/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Queretaro

text: hCoV-19/Mexico/QUE_CIAD-IMSS_202201066083/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Baja California Sur

text: hCoV-19/Mexico/BCS_CIAD-IMSS_202201066623/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Veracruz

text: hCoV-19/Mexico/VER_CIAD-IMSS_202201067038/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: Severe acute respiratory syndrome coronavirus 2

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: San Luis Potosi

text: hCoV-19/Mexico/SLP_IBT_IMSS_007731UIBZ_NC/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Mexico City

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Campeche

text: hCoV-19/Mexico/CAM_LANGEBIO_IMSS_9721/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Quintana Roo

text: hCoV-19/Mexico/ROO_LANGEBIO_IMSS_9732/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Campeche

text: hCoV-19/Mexico/CAM_LANGEBIO_IMSS_9740/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Yucatan

text: hCoV-19/Mexico/YUC_LANGEBIO_IMSS_9744/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Yucatan

text: hCoV-19/Mexico/YUC_LANGEBIO_IMSS_9745/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected