text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Jalisco

text: hCoV-19/Mexico/JAL_LANGEBIO_IMSS_13639/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


status: PUBLIC

characteristic: External Id

text: Instituto de Biotecnologia

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: not collected

tag: attribute

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

characteristic: description

text: not collected

text: not collected

text: Mexico: Jalisco

text: hCoV-19/Mexico/JAL_LANGEBIO_IMSS_13640/2022

text: Homo sapiens

characteristic: host

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

characteristic: isolate

text: nasopharyngeal swab

text: not collected

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: Consorcio Mexicano de Vigilancia Genomica (CoViGen-Mex). Julio Elías Alvarado-Yaah, Carlos F. Arias, Eduardo Becerril-Vargas, David Alejandro Cabrera-Gaytán, Guillermo Corona Armenta, Cristóbal Cháidez-Quiróz, Hermilo Domínguez-Zarate, Julissa Enciso-Ibarra, Gloria Espinosa-Ayala, Daniel Fregoso-Rueda, Alejandra García-Gasca, Rodrigo García-López, Bruno Gómez-Gil, Jean Pierre González, Irvin González-López, Ricardo Grande, Alfredo Herrera-Estrella, Carla Ivón Herrera-Nájera, Beatriz Jiménez-Moraila, Daniel Lira-Morales, Brenda Irasema Maldonado-Meza, María Guadalupe Márquez-Rosales, Julio César Martínez-Álvarez, Bernardo Martínez-Miguel, Gabriela Bibiana Martínez-Morales, Célida Martínez-Rodríguez, Fidencio Mejía-Nepomuceno, María Guadalupe de Jesús Mireles-Rivera, Gloria María Molina-Salinas, Héctor Montoya-Fuentes, Mario Mújica-Sánchez, José Esteban Muñoz-Medina, José de Jesús Nuñez-Contreras, Ilse Patricia Salinas-Peralta, Bruno Tonatiuh Rivas-Santiago, Mauricio Rosales-Rivera, Jorge Salas-Hernández, Ángel Gustavo Salas-Lais, Alejandro Sánchez-Flores, Clara Esperanza Santacruz-Tinoco, Nelly Sélem-Mojica, Blanca Taboada, Gloria Vázquez, Joel Armando Vázquez-Pérez.

characteristic: title

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Guanajuato

text: hCoV-19/Mexico/GUA_LANGEBIO_IMSS_13651/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Coahuila

text: hCoV-19/Mexico/COA_LANGEBIO_IMSS_13525/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Tamaulipas

text: hCoV-19/Mexico/TAM_LANGEBIO_IMSS_13543/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Nuevo Leon

text: hCoV-19/Mexico/NLE_LANGEBIO_IMSS_13580/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Chihuahua

text: hCoV-19/Mexico/CHH_LANGEBIO_IMSS_13586/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Puebla

text: hCoV-19/Mexico/PUE_LANGEBIO_IMSS_13394/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Mexico City

text: hCoV-19/Mexico/CMX_LANGEBIO_IMSS_13729/2022

text: Homo sapiens

text: mucus

text: Pharynge / Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Veracruz

text: hCoV-19/Mexico/VER_LANGEBIO_IMSS_13420/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Mexico City

text: hCoV-19/Mexico/CMX_LANGEBIO_IMSS_13759/2022

text: Homo sapiens

text: mucus

text: Pharynge / Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Veracruz

text: hCoV-19/Mexico/VER_LANGEBIO_IMSS_13436/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Mexico City

text: hCoV-19/Mexico/CMX_LANGEBIO_IMSS_13446/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Pharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Puebla

text: hCoV-19/Mexico/PUE_LANGEBIO_IMSS_13779/2022

text: Homo sapiens

text: mucus

text: Pharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Pharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Pharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Puebla

text: hCoV-19/Mexico/PUE_LANGEBIO_IMSS_13790/2022

text: Homo sapiens

text: mucus

text: Pharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Pharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Pharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Puebla

text: hCoV-19/Mexico/PUE_LANGEBIO_IMSS_13793/2022

text: Homo sapiens

text: mucus

text: Pharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Pharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Mexico City

text: hCoV-19/Mexico/CMX_LANGEBIO_IMSS_13801/2022

text: Homo sapiens

text: mucus

text: Pharynge / Nasopharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: State of Mexico

text: hCoV-19/Mexico/MEX_LANGEBIO_IMSS_13472/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: Severe acute respiratory syndrome coronavirus 2

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Mexico City

text: hCoV-19/Mexico/CMX_LANGEBIO_IMSS_13474/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: Consorcio Mexicano de Vigilancia Genomica (CoViGen-Mex). Julio Elías Alvarado-Yaah, Carlos F. Arias, Eduardo Becerril-Vargas, David Alejandro Cabrera-Gaytán, Guillermo Corona Armenta, Cristóbal Cháidez-Quiróz, Hermilo Domínguez-Zarate, Julissa Enciso-Ibarra, Gloria Espinosa-Ayala, Daniel Fregoso-Rueda, Alejandra García-Gasca, Rodrigo García-López, Bruno Gómez-Gil, Jean Pierre González, Irvin González-López, Ricardo Grande, Alfredo Herrera-Estrella, Carla Ivón Herrera-Nájera, Beatriz Jiménez-Moraila, Daniel Lira-Morales, Brenda Irasema Maldonado-Meza, María Guadalupe Márquez-Rosales, Julio César Martínez-Álvarez, Bernardo Martínez-Miguel, Gabriela Bibiana Martínez-Morales, Célida Martínez-Rodríguez, Fidencio Mejía-Nepomuceno, María Guadalupe de Jesús Mireles-Rivera, Gloria María Molina-Salinas, Héctor Montoya-Fuentes, Mario Mújica-Sánchez, José Esteban Muñoz-Medina, José de Jesús Nuñez-Contreras, Ilse Patricia Salinas-Peralta, Bruno Tonatiuh Rivas-Santiago, Mauricio Rosales-Rivera, Jorge Salas-Hernández, Ángel Gustavo Salas-Lais, Alejandro Sánchez-Flores, Clara Esperanza Santacruz-Tinoco, Nelly Sélem-Mojica, Blanca Taboada, Gloria Vázquez, Joel Armando Vázquez-Pérez.

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Mexico City

text: hCoV-19/Mexico/CMX_LANGEBIO_IMSS_13475/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: State of Mexico

text: hCoV-19/Mexico/MEX_LANGEBIO_IMSS_13480/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Mexico City

text: hCoV-19/Mexico/CMX_LANGEBIO_IMSS_13482/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Mexico City

text: hCoV-19/Mexico/CMX_LANGEBIO_IMSS_13485/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Queretaro

text: hCoV-19/Mexico/QUE_LANGEBIO_IMSS_13494/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: State of Mexico

text: hCoV-19/Mexico/MEX_LANGEBIO_IMSS_13810/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Guanajuato

text: Homo sapiens

text: mucus

text: Pharynge / Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Tamaulipas

text: Homo sapiens

text: mucus

text: Pharynge / Nasopharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Queretaro

text: Homo sapiens

text: mucus

text: Pharynge / Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Zacatecas

text: hCoV-19/Mexico/ZAC-LANGEBIO_IMSS_14370/2023

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Zacatecas

text: hCoV-19/Mexico/ZAC-LANGEBIO_IMSS_14386/2023

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: San Luis Potosi

text: hCoV-19/Mexico/SLP-LANGEBIO_IMSS_14390/2023

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Coahuila

text: hCoV-19/Mexico/COA-LANGEBIO_IMSS_13941/2023

text: Homo sapiens

text: mucus

text: Pharynge / Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Tamaulipas

text: hCoV-19/Mexico/TAM-LANGEBIO_IMSS_13942/2023

text: Homo sapiens

text: mucus

text: Pharynge / Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Durango

text: hCoV-19/Mexico/DUR-LANGEBIO_IMSS_13943/2023

text: Homo sapiens

text: mucus

text: Pharynge / Nasopharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Nuevo Leon

text: hCoV-19/Mexico/NLE-LANGEBIO_IMSS_13950/2023

text: Homo sapiens

text: mucus

text: Pharynge / Nasopharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Nuevo Leon

text: hCoV-19/Mexico/NLE-LANGEBIO_IMSS_13958/2023

text: Homo sapiens

text: mucus

text: Pharynge / Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Nuevo Leon

text: hCoV-19/Mexico/NLE-LANGEBIO_IMSS_13959/2023

text: Homo sapiens

text: mucus

text: Pharynge / Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: Severe acute respiratory syndrome coronavirus 2

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Nuevo Leon

text: hCoV-19/Mexico/NLE-LANGEBIO_IMSS_13961/2023

text: Homo sapiens

text: mucus

text: Pharynge / Nasopharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: Consorcio Mexicano de Vigilancia Genomica (CoViGen-Mex). Julio Elías Alvarado-Yaah, Carlos F. Arias, Eduardo Becerril-Vargas, David Alejandro Cabrera-Gaytán, Guillermo Corona Armenta, Cristóbal Cháidez-Quiróz, Hermilo Domínguez-Zarate, Julissa Enciso-Ibarra, Gloria Espinosa-Ayala, Daniel Fregoso-Rueda, Alejandra García-Gasca, Rodrigo García-López, Bruno Gómez-Gil, Jean Pierre González, Irvin González-López, Ricardo Grande, Alfredo Herrera-Estrella, Carla Ivón Herrera-Nájera, Beatriz Jiménez-Moraila, Daniel Lira-Morales, Brenda Irasema Maldonado-Meza, María Guadalupe Márquez-Rosales, Julio César Martínez-Álvarez, Bernardo Martínez-Miguel, Gabriela Bibiana Martínez-Morales, Célida Martínez-Rodríguez, Fidencio Mejía-Nepomuceno, María Guadalupe de Jesús Mireles-Rivera, Gloria María Molina-Salinas, Héctor Montoya-Fuentes, Mario Mújica-Sánchez, José Esteban Muñoz-Medina, José de Jesús Nuñez-Contreras, Ilse Patricia Salinas-Peralta, Bruno Tonatiuh Rivas-Santiago, Mauricio Rosales-Rivera, Jorge Salas-Hernández, Ángel Gustavo Salas-Lais, Alejandro Sánchez-Flores, Clara Esperanza Santacruz-Tinoco, Nelly Sélem-Mojica, Blanca Taboada, Gloria Vázquez, Joel Armando Vázquez-Pérez.

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Nuevo Leon

text: hCoV-19/Mexico/NLE-LANGEBIO_IMSS_13962/2023

text: Homo sapiens

text: mucus

text: Pharynge / Nasopharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Sonora

text: hCoV-19/Mexico/SON-LANGEBIO_IMSS_14298/2023

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Jalisco

text: hCoV-19/Mexico/JAL-LANGEBIO_IMSS_14305/2023

text: Homo sapiens

text: mucus

text: Pharynge / Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Colima

text: hCoV-19/Mexico/COL-LANGEBIO_IMSS_14345/2023

text: Homo sapiens

text: mucus

text: Pharynge / Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Queretaro

text: hCoV-19/Mexico/QUE-LANGEBIO_IMSS_14093/2023

text: Homo sapiens

text: mucus

text: Pharynge / Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Queretaro

text: hCoV-19/Mexico/QUE-LANGEBIO_IMSS_14094/2023

text: Homo sapiens

text: mucus

text: Pharynge / Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: State of Mexico

text: hCoV-19/Mexico/MEX-LANGEBIO_IMSS_14105/2023

text: Homo sapiens

text: mucus

text: Pharynge / Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: State of Mexico

text: hCoV-19/Mexico/MEX-LANGEBIO_IMSS_14147/2023

text: Homo sapiens

text: mucus

text: Pharynge / Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Baja California Sur

text: hCoV-19/Mexico/BCS-LANGEBIO_IMSS_14178/2023

text: Homo sapiens

text: mucus

text: Pharynge / Nasopharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: State of Mexico

text: hCoV-19/Mexico/MEX-LANGEBIO_IMSS_14179/2023

text: Homo sapiens

text: mucus

text: Pharynge / Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Puebla

text: hCoV-19/Mexico/PUE-LANGEBIO_IMSS_14194/2023

text: Homo sapiens

text: mucus

text: Pharynge / Nasopharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Morelos

text: hCoV-19/Mexico/MOR-LANGEBIO_IMSS_14290/2023

text: Homo sapiens

text: mucus

text: Pharynge / Nasopharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Nacional de Cardiologia

text: not collected

text: unknown

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Mexico City

text: Homo sapiens

text: mucus

text: unknown

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: unknown

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Hospital Margarita Maza de Juarez

text: not collected

text: Oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: not applicable

text: not collected

text: not collected

text: Mexico: Sinaloa

text: Homo sapiens

text: mucus

text: Oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: Consorcio Mexicano de Vigilancia Genomica (CoViGen-Mex). Julio Elias Alvarado-Yaah, Carlos F. Arias, Santiago Avila-Rios, Victor Hugo Borja-Aburto, Celia Boukadida, Juan Bautista Chale-Dzul , Jose Antonio Enciso-Moreno, Gloria Elena Espinoza-Ayala, Fernando Fontove-Herrera, Concepcion Grajales-Muniz, Ricardo Grande, Alfredo Herrera-Estrella, Carla Ivon Herrera-Najera, Pavel Isa, Brenda Irasema Maldonado-Meza, Bernardo Martinez-Miguel, Margarita Matias-Florentino, Maria Guadalupe de Jesus Mireles-Rivera, Gloria Maria Molina-Salinas, Hector Montoya-Fuentes, Jose Esteban Munoz-Medina, Jose de Jesus Nunez-Contreras, Alicia Ocana-Mondragon, Luis Alberto Ochoa-Carrera, Hector Esteban Paz-Juarez, Francisco Pulido, Helen Haydee Fernanda Ramirez-Plascencia, Angel Gustavo Salas-Lais, Jorge Ivan Salinal-Nevarez, Alejandro Sanchez-Flores, Clara Esperanza Santacruz-Tinoco, Maria Guadalupe Santiago-Mauricio, Nelly Selem-Mojica, Blanca Taboada, Gloria Vazquez

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Hospital Margarita Maza de Juarez

text: not collected

text: Oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: not applicable

text: not collected

text: not collected

text: Mexico: Sinaloa

text: Homo sapiens

text: mucus

text: Oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: CIAD Hermosillo

text: not collected

text: Oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: not applicable

text: not collected

text: not collected

text: Mexico: Sonora

text: Homo sapiens

text: mucus

text: Oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Microbial Genomics Laboratory

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: not applicable

text: not collected

text: not collected

text: Mexico: Nayarit

text: hCoV-19/Mexico/NAY_CIAD-MZT_5531-0824/2021

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Microbial Genomics Laboratory

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: not applicable

text: not collected

text: not collected

text: Mexico: Nayarit

text: hCoV-19/Mexico/NAY_CIAD-MZT_5693-0910/2021

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: Severe acute respiratory syndrome coronavirus 2

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Imagenes Diagnosticas de Mazatlan

text: not collected

text: Oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: not applicable

text: not collected

text: not collected

text: Mexico: Sinaloa

text: Homo sapiens

text: mucus

text: Oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Laboratorios Delia Barraza

text: not collected

text: Oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: not applicable

text: not collected

text: not collected

text: Mexico: Sinaloa

text: Homo sapiens

text: mucus

text: Oropharynge

text: mucus

text: not collected

text: unknown

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Laboratorios Delia Barraza

text: not collected

text: Oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: not applicable

text: not collected

text: not collected

text: Mexico: Sinaloa

text: Homo sapiens

text: mucus

text: Oropharynge

text: mucus

text: not collected

text: unknown

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Microbial Genomics Laboratory

text: not collected

text: Oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: not applicable

text: not collected

text: not collected

text: Mexico: Sinaloa

text: Homo sapiens

text: mucus

text: Oropharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: Consorcio Mexicano de Vigilancia Genomica (CoViGen-Mex). Julio Elías Alvarado-Yaah, Carlos F. Arias, Eduardo Becerril-Vargas, David Alejandro Cabrera-Gaytán, Guillermo Corona Armenta, Cristóbal Cháidez-Quiróz, Hermilo Domínguez-Zarate, Julissa Enciso-Ibarra, Gloria Espinosa-Ayala, Daniel Fregoso-Rueda, Alejandra García-Gasca, Rodrigo García-López, Bruno Gómez-Gil, Jean Pierre González, Irvin González-López, Ricardo Grande, Alfredo Herrera-Estrella, Carla Ivón Herrera-Nájera, Beatriz Jiménez-Moraila, Daniel Lira-Morales, Brenda Irasema Maldonado-Meza, María Guadalupe Márquez-Rosales, Julio César Martínez-Álvarez, Bernardo Martínez-Miguel, Gabriela Bibiana Martínez-Morales, Célida Martínez-Rodríguez, Fidencio Mejía-Nepomuceno, María Guadalupe de Jesús Mireles-Rivera, Gloria María Molina-Salinas, Héctor Montoya-Fuentes, Mario Mújica-Sánchez, José Esteban Muñoz-Medina, José de Jesús Nuñez-Contreras, Ilse Patricia Salinas-Peralta, Bruno Tonatiuh Rivas-Santiago, Mauricio Rosales-Rivera, Jorge Salas-Hernández, Ángel Gustavo Salas-Lais, Alejandro Sánchez-Flores, Clara Esperanza Santacruz-Tinoco, Nelly Sélem-Mojica, Blanca Taboada, Gloria Vázquez, Joel Armando Vázquez-Pérez.

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Microbial Genomics Laboratory

text: not collected

text: Oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: not applicable

text: not collected

text: not collected

text: Mexico: Sinaloa

text: Homo sapiens

text: mucus

text: Oropharynge

text: mucus

text: not collected

text: unknown

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


SiHa cell line

text: Centro de Investigacion Biomedica de Occidente

text: live

text: Human

text: 55 years old

characteristic: age

text: DKFZ-Heidelberg

text: SiHa

text: Epithelial cell

text: Cervical Cancer derived cell line HPV16 postive

text: Squamous Cell Carcinoma

characteristic: disease

text: Asian

characteristic: ethnicity

text: Germany: Heidelberg

text: This line was established from fragments of a primary tissue sample obtained after surgery from a Japanesepatient.

text: Homo sapiens

text: Cell culture

text: female

characteristic: sex

text: Uterus; Cervix

characteristic: tissue

text: SiHa


HeLa cell line

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Human

text: 31 years old

text: DKFZ-Heidelberg

text: HeLa

text: Epithelial cell

text: Cervical Cancer derived cell line HPV18 positive

text: Adenocarcinoma

text: Black

text: Germany: Heidelberg

text: HeLa is an epithelial cell that was isolated from the cervix of a 31-year-old, Black female withadenocarcinoma.

text: Homo sapiens

text: Cell culture

text: female

text: Uterus; Cervix

text: HeLa


C33A cell line

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Human

text: 66 years old

text: DKFZ-Heidelberg

text: Epithelial cell

text: Cervical Cancer derived cell line HPV negative

text: Carcinoma

text: Caucasian

text: Germany: Heidelberg

text: The C-33 A cell line is one of a series of lines derived by N. Auersperg from cervical cancerbiopsies.

text: Homo sapiens

text: Cell culture

text: female

text: Uterus; Cervix


HaCaT cell line

text: live

text: Human

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: 62 years old

text: DKFZ-Heidelberg

text: HaCaT

text: Epithelial cell

text: Non-tumorigenic keratinocytes

text: Not applicable

text: Caucasian

text: Germany: Heidelberg

text: Full thickness adult human body skin was obtained by surgical excision from the distant periphery of a melanoma located on the upper half of the back

text: Homo sapiens

text: Cell culture

text: male

text: Skin

text: HaCaT


wild type

text: University of California

text: live

text: Invertebrate

text: USA: New Haven, CT

text: Homo sapiens

characteristic: host

characteristic: isolate

text: red blood cells

text: Babesia duncani

text: red blood cells

text: Babesia duncani WA1 wild type for fosinopril study


name: Babesia duncani (drug resistance parasites)

text: University of California

text: live

text: Invertebrate

text: Pratap Vydyam

text: USA: New Haven, CT

text: Homo sapiens

text: red blood cells

text: 41.3032 N 72.9339 W

text: Babesia duncani

characteristic: organism

text: red blood cells

characteristic: title


text: Mayo Clinic

text: live

text: Generic

text: missing

text: missing

characteristic: group

text: Mus musculus

text: cortex

characteristic: strain


text: The University of Chicago

text: live

text: Generic

text: RBFOX2(Proteintech, #12498-1-AP)

characteristic: antibody

characteristic: cell line

characteristic: cell number

text: Liver cancer cells

characteristic: cell type

text: missing

text: WT

characteristic: genotype

text: missing

text: Homo sapiens

text: Liver cancer cell line

text: Liver cancer cell line

text: H.HepG2.40k.RBFOX2-noSecAnti.noRNase.30nt.rep2

text: Rich Medium

characteristic: treatment


characteristic: External Id

text: The University of Chicago

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: RBFOX2(Proteintech, #12498-1-AP)

text: Liver cancer cells

text: missing

text: WT

text: missing

text: Homo sapiens

text: Liver cancer cell line

text: Liver cancer cell line

characteristic: tissue

text: H.HepG2.40k.RBFOX2-noSecAnti.noRNase.30nt.rep1

text: Rich Medium


text: The University of Chicago

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: RBFOX2(Proteintech, #12498-1-AP)

text: Liver cancer cells

text: missing

text: WT

text: missing

text: Homo sapiens

text: Liver cancer cell line

text: Liver cancer cell line

text: Rich Medium


text: The University of Chicago

text: live

text: Generic

text: RBFOX2(Proteintech, #12498-1-AP)

text: Liver cancer cells

text: missing

text: WT

text: missing

text: Homo sapiens

characteristic: organism

text: Liver cancer cell line

text: Liver cancer cell line

text: H.HepG2.40k.RBFOX2.StrongRNase.30nt.rep2

characteristic: title

text: Rich Medium


text: The University of Chicago

text: live

text: Generic

text: RBFOX2(Proteintech, #12498-1-AP)

characteristic: antibody

characteristic: cell line

text: Liver cancer cells

text: missing

text: WT

text: missing

text: Homo sapiens

text: Liver cancer cell line

text: Liver cancer cell line

text: H.HepG2.40k.RBFOX2.StrongRNase.30nt.rep1

text: Rich Medium


text: The University of Chicago

text: live

text: Generic

characteristic: cell number

text: Liver cancer cells

characteristic: cell type

text: missing

text: WT

text: missing

text: Homo sapiens

text: Liver cancer cell line

text: Liver cancer cell line

text: Rich Medium


text: Scientific Computing, IT Division, University of Bergen

text: live

text: Generic

text: non-tumorigenic human breast epithelial

text: missing

text: HSF1 overexpression

characteristic: genotype

text: missing

text: Homo sapiens


characteristic: External Id

text: live

text: Generic

text: non-tumorigenic human breast epithelial

text: missing

text: WT

text: missing

text: Homo sapiens


text: Medicine, University of Wisconsin-Madisin

characteristic: INSDC center name

text: live

text: Generic

text: male

characteristic: Sex

text: missing

text: Control

characteristic: diet

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Mal_F_11N


characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: male

text: missing

text: Low Amino Acid

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Mal_H_105N


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: male

text: missing

text: Control

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

characteristic: tissue

text: Liver, O_Mal_F_113N


text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: female

text: missing

text: Control

text: missing

text: Mus musculus

characteristic: organism

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Fem_F_74R


text: live

text: Generic

text: male

text: missing

text: Low Isoleucine

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Mal_HH_93R

characteristic: title


text: live

text: Generic

text: female

text: missing

text: Low Isoleucine

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Fem_HH_2R


text: live

text: Generic

text: male

text: missing

text: Control

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Mal_F_18N


text: live

text: Generic

text: female

text: missing

text: Low Isoleucine

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Fem_HH_9R


text: live

text: Generic

text: female

text: missing

text: Low Amino Acid

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Fem_H_13R


text: live

text: Generic

text: female

text: missing

text: Control

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Fem_F_25R


text: live

text: Generic

text: female

text: missing

text: Low Amino Acid

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Fem_H_72R


text: live

text: Generic

text: female

text: missing

text: Low Amino Acid

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Fem_H_81N


text: live

text: Generic

text: male

text: missing

text: Low Amino Acid

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Mal_H_108N


text: live

text: Generic

text: female

text: missing

text: Control

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Fem_F_12N


text: live

text: Generic

text: male

text: missing

text: Low Amino Acid

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_MAL_H_28R


text: live

text: Generic

text: male

text: missing

text: Low Amino Acid

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Mal_H_1R


text: live

text: Generic

text: male

text: missing

text: Low Isoleucine

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Mal_HH_22R


text: live

text: Generic

text: female

text: missing

text: Low Isoleucine

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Fem_HH_90N


text: live

text: Generic

text: male

text: missing

text: Control

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Mal_F_112R


text: live

text: Generic

text: female

text: missing

text: Low Amino Acid

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Fem_H_117R


text: live

text: Generic

text: male

text: missing

text: Low Amino Acid

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Mal_H_107L


text: live

text: Generic

text: female

text: missing

text: Low Isoleucine

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Fem_HH_120L


text: live

text: Generic

text: male

text: missing

text: Control

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Mal_F_11L


text: live

text: Generic

text: female

text: missing

text: Control

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Fem_F_119R


text: live

text: Generic

text: male

text: missing

text: Low Amino Acid

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Mal_H_106N


text: live

text: Generic

text: male

text: missing

text: Low Amino Acid

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Mal_H_103N


text: live

text: Generic

text: male

text: missing

text: Low Amino Acid

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Mal_H_1L


text: live

text: Generic

text: male

text: missing

text: Low Isoleucine

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Mal_HH_20N


text: live

text: Generic

text: female

text: missing

text: Control

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Fem_F_116R


text: live

text: Generic

text: male

text: missing

text: Low Isoleucine

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Mal_HH_102N


text: live

text: Generic

text: female

text: missing

text: Low Isoleucine

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Fem_HH_9L


text: live

text: Generic

text: female

text: missing

text: Control

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Fem_F_71N


text: live

text: Generic

text: female

text: missing

text: Low Isoleucine

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Fem_HH_84N


text: live

text: Generic

text: female

text: missing

text: Low Isoleucine

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_FEM_HH_76L


text: live

text: Generic

text: female

text: missing

text: Low Amino Acid

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Fem_H_87R


text: live

text: Generic

text: male

text: missing

text: Control

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Mal_F_10N


text: live

text: Generic

text: female

text: missing

text: Low Isoleucine

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Fem_HH_114R


text: live

text: Generic

text: female

text: missing

text: Low Isoleucine

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Fem_HH_3N


text: live

text: Generic

text: female

text: missing

text: Low Isoleucine

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Fem_HH_30N


text: live

text: Generic

text: male

text: missing

text: Control

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Mal_F_91R


text: live

text: Generic

text: female

text: missing

text: Control

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Fem_F_5R


text: live

text: Generic

text: female

text: missing

text: Low Amino Acid

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Fem_H_24N


text: live

text: Generic

text: male

text: missing

text: Control

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Mal_F_10R


text: live

text: Generic

text: female

text: missing

text: Control

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_FEM_F_5L


text: live

text: Generic

text: male

text: missing

text: Low Isoleucine

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Mal_HH_22N


text: live

text: Generic

text: male

text: missing

text: Low Isoleucine

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Mal_HH_23L


text: live

text: Generic

text: female

text: missing

text: Low Isoleucine

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_FEM_HH_14N


text: live

text: Generic

text: female

text: missing

text: Low Amino Acid

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Fem_H_75N


text: live

text: Generic

text: female

text: missing

text: Low Amino Acid

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Fem_H_85N


text: live

text: Generic

text: female

text: missing

text: Control

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Fem_F_5N


text: live

text: Generic

text: female

text: missing

text: Low Amino Acid

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Fem_H_24R


text: live

text: Generic

text: female

text: missing

text: Low Isoleucine

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Fem_HH_122L


text: live

text: Generic

text: female

text: missing

text: Low Amino Acid

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Fem_H_8R


text: live

text: Generic

text: male

text: missing

text: Low Amino Acid

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Mal_H_92N


text: live

text: Generic

text: female

text: missing

text: Low Amino Acid

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_FEM_H_83R


text: live

text: Generic

text: male

text: missing

text: Control

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Mal_F_101R


text: live

text: Generic

text: female

text: missing

text: Control

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Fem_F_116L


text: live

text: Generic

text: male

text: missing

text: Low Isoleucine

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Mal_HH_109N


text: live

text: Generic

text: male

text: missing

text: Control

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Mal_F_11R


text: live

text: Generic

text: male

text: missing

text: Low Amino Acid

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Mal_H_96N


text: live

text: Generic

text: female

text: missing

text: Low Amino Acid

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Fem_H_4R


text: live

text: Generic

text: male

text: missing

text: Low Amino Acid

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Mal_H_29R


text: live

text: Generic

text: male

text: missing

text: Low Amino Acid

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Mal_H_7N


text: live

text: Generic

text: female

text: missing

text: Control

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Fem_F_12R


text: live

text: Generic

text: male

text: missing

text: Low Isoleucine

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Mal_HH_99R


text: live

text: Generic

text: male

text: missing

text: Control

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Mal_F_101N


text: live

text: Generic

text: female

text: missing

text: Control

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Fem_F_15N


text: live

text: Generic

text: male

text: missing

text: Low Isoleucine

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Mal_HH_104L


text: live

text: Generic

text: male

text: missing

text: Control

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Mal_F_91L


text: live

text: Generic

text: female

text: missing

text: Control

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Fem_F_86R


text: live

text: Generic

text: male

text: missing

text: Low Amino Acid

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Mal_H_29L


text: live

text: Generic

text: male

text: missing

text: Low Isoleucine

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Mal_HH_20R


text: live

text: Generic

text: female

text: missing

text: Control

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Fem_F_88R


text: live

text: Generic

text: female

text: missing

text: Low Amino Acid

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Fem_H_13L


text: live

text: Generic

text: male

text: missing

text: Control

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Mal_F_95R


text: live

text: Generic

text: male

text: missing

text: Low Amino Acid

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Mal_H_97N


text: live

text: Generic

text: male

text: missing

text: Low Isoleucine

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Mal_HH_98N


text: live

text: Generic

text: female

text: missing

text: Low Amino Acid

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Fem_H_13N


text: live

text: Generic

text: female

text: missing

text: Low Isoleucine

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Fem_HH_3R


text: live

text: Generic

text: male

text: missing

text: Low Isoleucine

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Mal_HH_17L


text: live

text: Generic

text: male

text: missing

text: Low Isoleucine

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Mal_HH_109R


text: live

text: Generic

text: female

text: missing

text: Low Isoleucine

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Fem_HH_122N


text: live

text: Generic

text: female

text: missing

text: Control

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Fem_F_118L


text: live

text: Generic

text: male

text: missing

text: Control

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Mal_F_19R


text: live

text: Generic

text: female

text: missing

text: Low Isoleucine

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Fem_HH_3L


text: live

text: Generic

text: female

text: missing

text: Low Amino Acid

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Fem_H_27L


text: live

text: Generic

text: male

text: missing

text: Low Amino Acid

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Mal_H_28N


text: live

text: Generic

text: male

text: missing

text: Low Isoleucine

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Mal_HH_104N


text: live

text: Generic

text: male

text: missing

text: Low Isoleucine

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Mal_HH_6N


text: live

text: Generic

text: female

text: missing

text: Low Isoleucine

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, O_Fem_HH_123R


text: live

text: Generic

text: male

text: missing

text: Control

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Mal_F_21L


text: live

text: Generic

text: female

text: missing

text: Control

text: missing

text: Mus musculus

text: Liver, Fasted

text: Liver, Fasted

text: Liver, Y_Fem_F_26N


text: dbGaP

text: live

text: Generic

text: RNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Blood

characteristic: body site

text: GRU

text: Tumor infiltrating lymphocytes

characteristic: histological type

text: No

characteristic: is tumor

text: Homo sapiens

text: female

characteristic: sex

text: Case Set

characteristic: study design

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Non-tumor RNA sample from Blood of a human female participant in the dbGaP study "Phenotypic Signatures of Circulating Neoantigen-Reactive CD8+ T Cells in Patients with Metastatic Cancers"


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: RNA

text: Blood

text: GRU

text: Tumor infiltrating lymphocytes

text: No

text: Homo sapiens

text: male

text: Case Set

text: Non-tumor RNA sample from Blood of a human male participant in the dbGaP study "Phenotypic Signatures of Circulating Neoantigen-Reactive CD8+ T Cells in Patients with Metastatic Cancers"


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: RNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Blood

text: GRU

text: Tumor infiltrating lymphocytes

text: No

text: Homo sapiens

characteristic: organism

text: female

text: Case Set

text: Phenotypic Signatures of Circulating Neoantigen-Reactive CD8+ T Cells in Patients with Metastatic Cancers

characteristic: title


text: dbGaP

text: live

text: Generic

text: RNA

text: Blood

characteristic: body site

text: GRU

text: Tumor infiltrating lymphocytes

characteristic: histological type

text: No

characteristic: is tumor

text: Homo sapiens

text: male

characteristic: sex

text: Case Set

characteristic: study design

characteristic: study name

characteristic: submitted sample id


characteristic: External Id

text: UPVD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

text: France

text: soil

text: 42.681942 N 2.896969 E

text: soil metagenome

text: Metagenome or environmental sample from soil metagenome


Aphrocallistes beatrix P9

text: The University of New South Wales

text: live

characteristic: INSDC status

text: MIMAG.host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Keywords: GSC:MIxS;MIMAG:6.0

characteristic: description

text: Brazil: Campos Basin, South Atlantic

characteristic: isolate

text: Sponge tissue

text: 22.39 S 40.26 W

text: Aphrocallistes beatrix

text: MIMAG Metagenome-assembled Genome sample from Aphrocallistes beatrix

type: derived-from


text: University Hospital Muenster

text: live

text: Pathogen.env

text: Claudia Gallert, University of Applied Science Emden/Leer

text: Germany

text: environmental sample

text: not collected

text: Clostridioides difficile

characteristic: organism

characteristic: strain

text: Pathogen: environmental/food/other sample from Clostridioides difficile

characteristic: title


text: University Hospital Muenster

text: live

text: Pathogen.env

text: Germany

text: missing

text: not collected

text: Clostridioides difficile