text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Yucatan

text: hCoV-19/Mexico/YUC_LANGEBIO_IMSS_9748/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


status: PUBLIC

characteristic: External Id

text: Instituto de Biotecnologia

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: not collected

tag: attribute

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

characteristic: description

text: not collected

text: not collected

text: Mexico: Quintana Roo

text: hCoV-19/Mexico/ROO_LANGEBIO_IMSS_9764/2022

text: Homo sapiens

characteristic: host

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

characteristic: isolate

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: Consorcio Mexicano de Vigilancia Genomica (CoViGen-Mex). Julio Elías Alvarado-Yaah, Carlos F. Arias, Eduardo Becerril-Vargas, David Alejandro Cabrera-Gaytán, Guillermo Corona Armenta, Cristóbal Cháidez-Quiróz, Hermilo Domínguez-Zarate, Julissa Enciso-Ibarra, Gloria Espinosa-Ayala, Daniel Fregoso-Rueda, Alejandra García-Gasca, Rodrigo García-López, Bruno Gómez-Gil, Jean Pierre González, Irvin González-López, Ricardo Grande, Alfredo Herrera-Estrella, Carla Ivón Herrera-Nájera, Beatriz Jiménez-Moraila, Daniel Lira-Morales, Brenda Irasema Maldonado-Meza, María Guadalupe Márquez-Rosales, Julio César Martínez-Álvarez, Bernardo Martínez-Miguel, Gabriela Bibiana Martínez-Morales, Célida Martínez-Rodríguez, Fidencio Mejía-Nepomuceno, María Guadalupe de Jesús Mireles-Rivera, Gloria María Molina-Salinas, Héctor Montoya-Fuentes, Mario Mújica-Sánchez, José Esteban Muñoz-Medina, José de Jesús Nuñez-Contreras, Ilse Patricia Salinas-Peralta, Bruno Tonatiuh Rivas-Santiago, Mauricio Rosales-Rivera, Jorge Salas-Hernández, Ángel Gustavo Salas-Lais, Alejandro Sánchez-Flores, Clara Esperanza Santacruz-Tinoco, Nelly Sélem-Mojica, Blanca Taboada, Gloria Vázquez, Joel Armando Vázquez-Pérez.

characteristic: title

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Yucatan

text: hCoV-19/Mexico/YUC_LANGEBIO_IMSS_9765/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Jalisco

text: hCoV-19/Mexico/JAL_LANGEBIO_IMSS_9840/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Jalisco

text: hCoV-19/Mexico/JAL_LANGEBIO_IMSS_9844/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Sinaloa

text: hCoV-19/Mexico/SIN_LANGEBIO_IMSS_9851/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Sinaloa

text: hCoV-19/Mexico/SIN_LANGEBIO_IMSS_9852/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Nuevo Leon

text: hCoV-19/Mexico/NLE_LANGEBIO_IMSS_30127_NC/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Chihuahua

text: hCoV-19/Mexico/CHH_LANGEBIO_IMSS_30871_NC/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Veracruz

text: hCoV-19/Mexico/VER_LANGEBIO_IMSS_10008/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: State of Mexico

text: hCoV-19/Mexico/MEX_LANGEBIO_IMSS_10020/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Puebla

text: hCoV-19/Mexico/PUE_LANGEBIO_IMSS_10031/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Mexico City

text: hCoV-19/Mexico/CMX_LANGEBIO_IMSS_10075/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Chiapas

text: hCoV-19/Mexico/CHP_LANGEBIO_IMSS_10101/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Puebla

text: hCoV-19/Mexico/PUE_LANGEBIO_IMSS_10141/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Guanajuato

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Sonora

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Baja California Sur

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Baja California

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Zacatecas

text: hCoV-19/Mexico/ZAC_CIAD-IMSS_202201008979/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Colima

text: hCoV-19/Mexico/COL_CIAD-IMSS_202201029834/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Pharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Jalisco

text: hCoV-19/Mexico/JAL_CIAD-IMSS_202201030239/2022

text: Homo sapiens

text: mucus

text: Pharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Pharyngeal swab

text: not collected

text: Severe acute respiratory syndrome coronavirus 2

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Sinaloa

text: hCoV-19/Mexico/SIN_CIAD-IMSS_202201030660/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: Consorcio Mexicano de Vigilancia Genomica (CoViGen-Mex). Julio Elías Alvarado-Yaah, Carlos F. Arias, Eduardo Becerril-Vargas, David Alejandro Cabrera-Gaytán, Guillermo Corona Armenta, Cristóbal Cháidez-Quiróz, Hermilo Domínguez-Zarate, Julissa Enciso-Ibarra, Gloria Espinosa-Ayala, Daniel Fregoso-Rueda, Alejandra García-Gasca, Rodrigo García-López, Bruno Gómez-Gil, Jean Pierre González, Irvin González-López, Ricardo Grande, Alfredo Herrera-Estrella, Carla Ivón Herrera-Nájera, Beatriz Jiménez-Moraila, Daniel Lira-Morales, Brenda Irasema Maldonado-Meza, María Guadalupe Márquez-Rosales, Julio César Martínez-Álvarez, Bernardo Martínez-Miguel, Gabriela Bibiana Martínez-Morales, Célida Martínez-Rodríguez, Fidencio Mejía-Nepomuceno, María Guadalupe de Jesús Mireles-Rivera, Gloria María Molina-Salinas, Héctor Montoya-Fuentes, Mario Mújica-Sánchez, José Esteban Muñoz-Medina, José de Jesús Nuñez-Contreras, Ilse Patricia Salinas-Peralta, Bruno Tonatiuh Rivas-Santiago, Mauricio Rosales-Rivera, Jorge Salas-Hernández, Ángel Gustavo Salas-Lais, Alejandro Sánchez-Flores, Clara Esperanza Santacruz-Tinoco, Nelly Sélem-Mojica, Blanca Taboada, Gloria Vázquez, Joel Armando Vázquez-Pérez.

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Mexico City

text: hCoV-19/Mexico/CMX_CIAD-IMSS_202201091236/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: San Luis Potosi

text: hCoV-19/Mexico/SLP_LANGEBIO_IMSS_10599/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Zacatecas

text: hCoV-19/Mexico/ZAC_LANGEBIO_IMSS_09157_NC/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Yucatan

text: hCoV-19/Mexico/YUC_LANGEBIO_IMSS_10652/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Yucatan

text: hCoV-19/Mexico/YUC_LANGEBIO_IMSS_10664/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Michoacan

text: hCoV-19/Mexico/MIC_LANGEBIO_IMSS_10497/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Sonora

text: hCoV-19/Mexico/SON_LANGEBIO_IMSS_10576/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Sonora

text: hCoV-19/Mexico/SON_LANGEBIO_IMSS_10577/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Colima

text: hCoV-19/Mexico/COL_LANGEBIO_IMSS_31280_NC/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Nuevo Leon

text: hCoV-19/Mexico/NLE_LANGEBIO_IMSS_10398/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Coahuila

text: hCoV-19/Mexico/COA_LANGEBIO_IMSS_10462/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Chihuahua

text: hCoV-19/Mexico/CHH_LANGEBIO_IMSS_10473/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Hidalgo

text: hCoV-19/Mexico/HID_LANGEBIO_IMSS_10248/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: State of Mexico

text: hCoV-19/Mexico/MEX_LANGEBIO_IMSS_10318/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Morelos

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: Severe acute respiratory syndrome coronavirus 2

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Quintana Roo

text: hCoV-19/Mexico/ROO_CIAD-IMSS_01016776/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Quintana Roo

text: hCoV-19/Mexico/ROO_CIAD-IMSS_01016777/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: Consorcio Mexicano de Vigilancia Genomica (CoViGen-Mex). Julio Elías Alvarado-Yaah, Carlos F. Arias, Eduardo Becerril-Vargas, David Alejandro Cabrera-Gaytán, Guillermo Corona Armenta, Cristóbal Cháidez-Quiróz, Hermilo Domínguez-Zarate, Julissa Enciso-Ibarra, Gloria Espinosa-Ayala, Daniel Fregoso-Rueda, Alejandra García-Gasca, Rodrigo García-López, Bruno Gómez-Gil, Jean Pierre González, Irvin González-López, Ricardo Grande, Alfredo Herrera-Estrella, Carla Ivón Herrera-Nájera, Beatriz Jiménez-Moraila, Daniel Lira-Morales, Brenda Irasema Maldonado-Meza, María Guadalupe Márquez-Rosales, Julio César Martínez-Álvarez, Bernardo Martínez-Miguel, Gabriela Bibiana Martínez-Morales, Célida Martínez-Rodríguez, Fidencio Mejía-Nepomuceno, María Guadalupe de Jesús Mireles-Rivera, Gloria María Molina-Salinas, Héctor Montoya-Fuentes, Mario Mújica-Sánchez, José Esteban Muñoz-Medina, José de Jesús Nuñez-Contreras, Ilse Patricia Salinas-Peralta, Bruno Tonatiuh Rivas-Santiago, Mauricio Rosales-Rivera, Jorge Salas-Hernández, Ángel Gustavo Salas-Lais, Alejandro Sánchez-Flores, Clara Esperanza Santacruz-Tinoco, Nelly Sélem-Mojica, Blanca Taboada, Gloria Vázquez, Joel Armando Vázquez-Pérez.

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Quintana Roo

text: hCoV-19/Mexico/ROO_CIAD-IMSS_01016778/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Sinaloa

text: hCoV-19/Mexico/SIN_CIAD-IMSS_01031790/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Sonora

text: hCoV-19/Mexico/SON_LANGEBIO_IMSS_10753/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Jalisco

text: hCoV-19/Mexico/JAL_LANGEBIO_IMSS_32315_NC/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Nuevo Leon

text: hCoV-19/Mexico/NLE_LANGEBIO_IMSS_10941/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Mexico City

text: hCoV-19/Mexico/CMX_LANGEBIO_IMSS_10856/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Queretaro

text: hCoV-19/Mexico/QUE_LANGEBIO_IMSS_10857/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Queretaro

text: hCoV-19/Mexico/QUE_LANGEBIO_IMSS_10861/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Baja California

text: hCoV-19/Mexico/BCN_LANGEBIO_IMSS_10868/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Baja California

text: hCoV-19/Mexico/BCN_LANGEBIO_IMSS_10873/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Pharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Puebla

text: hCoV-19/Mexico/PUE_LANGEBIO_IMSS_10881/2022

text: Homo sapiens

text: mucus

text: Pharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Pharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Baja California

text: hCoV-19/Mexico/BCN_LANGEBIO_IMSS_10916/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Queretaro

text: hCoV-19/Mexico/QUE_LANGEBIO_IMSS_11118/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: San Luis Potosi

text: hCoV-19/Mexico/SLP_CIAD-IMSS_202201010123/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: Severe acute respiratory syndrome coronavirus 2

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Mexico City

text: hCoV-19/Mexico/CMX_CIAD-IMSS_202201102892/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Mexico City

text: hCoV-19/Mexico/CMX_CIAD-IMSS_202201103150/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: Consorcio Mexicano de Vigilancia Genomica (CoViGen-Mex). Julio Elías Alvarado-Yaah, Carlos F. Arias, Eduardo Becerril-Vargas, David Alejandro Cabrera-Gaytán, Guillermo Corona Armenta, Cristóbal Cháidez-Quiróz, Hermilo Domínguez-Zarate, Julissa Enciso-Ibarra, Gloria Espinosa-Ayala, Daniel Fregoso-Rueda, Alejandra García-Gasca, Rodrigo García-López, Bruno Gómez-Gil, Jean Pierre González, Irvin González-López, Ricardo Grande, Alfredo Herrera-Estrella, Carla Ivón Herrera-Nájera, Beatriz Jiménez-Moraila, Daniel Lira-Morales, Brenda Irasema Maldonado-Meza, María Guadalupe Márquez-Rosales, Julio César Martínez-Álvarez, Bernardo Martínez-Miguel, Gabriela Bibiana Martínez-Morales, Célida Martínez-Rodríguez, Fidencio Mejía-Nepomuceno, María Guadalupe de Jesús Mireles-Rivera, Gloria María Molina-Salinas, Héctor Montoya-Fuentes, Mario Mújica-Sánchez, José Esteban Muñoz-Medina, José de Jesús Nuñez-Contreras, Ilse Patricia Salinas-Peralta, Bruno Tonatiuh Rivas-Santiago, Mauricio Rosales-Rivera, Jorge Salas-Hernández, Ángel Gustavo Salas-Lais, Alejandro Sánchez-Flores, Clara Esperanza Santacruz-Tinoco, Nelly Sélem-Mojica, Blanca Taboada, Gloria Vázquez, Joel Armando Vázquez-Pérez.

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Pharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: State of Mexico

text: hCoV-19/Mexico/MEX_CIAD-IMSS_202201103825/2022

text: Homo sapiens

text: mucus

text: Pharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Pharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Zacatecas

text: hCoV-19/Mexico/ZAC_LANGEBIO_IMSS_11370/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: San Luis Potosi

text: hCoV-19/Mexico/SLP_LANGEBIO_IMSS_11371/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Yucatan

text: hCoV-19/Mexico/YUC_LANGEBIO_IMSS_11456/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Jalisco

text: hCoV-19/Mexico/JAL_LANGEBIO_IMSS_28695_NC/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Jalisco

text: hCoV-19/Mexico/JAL_LANGEBIO_IMSS_11319/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Sonora

text: hCoV-19/Mexico/SON_LANGEBIO_IMSS_11325/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Sonora

text: hCoV-19/Mexico/SON_LANGEBIO_IMSS_11326/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Chihuahua

text: hCoV-19/Mexico/CHH_LANGEBIO_IMSS_11203/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Nuevo Leon

text: hCoV-19/Mexico/NLE_LANGEBIO_IMSS_11439/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Baja California Sur

text: hCoV-19/Mexico/BCS_LANGEBIO_IMSS_11275/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: State of Mexico

text: hCoV-19/Mexico/MEX_LANGEBIO_IMSS_11399/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Mexico City

text: hCoV-19/Mexico/CMX_LANGEBIO_IMSS_11419/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Baja California

text: hCoV-19/Mexico/BCN_LANGEBIO_IMSS_11428/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: Severe acute respiratory syndrome coronavirus 2

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Zacatecas

text: hCoV-19/Mexico/ZAC_LANGEBIO_IMSS_0336/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Yucatan

text: hCoV-19/Mexico/YUC_LANGEBIO_IMSS_0406/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: Consorcio Mexicano de Vigilancia Genomica (CoViGen-Mex). Julio Elías Alvarado-Yaah, Carlos F. Arias, Eduardo Becerril-Vargas, David Alejandro Cabrera-Gaytán, Guillermo Corona Armenta, Cristóbal Cháidez-Quiróz, Hermilo Domínguez-Zarate, Julissa Enciso-Ibarra, Gloria Espinosa-Ayala, Daniel Fregoso-Rueda, Alejandra García-Gasca, Rodrigo García-López, Bruno Gómez-Gil, Jean Pierre González, Irvin González-López, Ricardo Grande, Alfredo Herrera-Estrella, Carla Ivón Herrera-Nájera, Beatriz Jiménez-Moraila, Daniel Lira-Morales, Brenda Irasema Maldonado-Meza, María Guadalupe Márquez-Rosales, Julio César Martínez-Álvarez, Bernardo Martínez-Miguel, Gabriela Bibiana Martínez-Morales, Célida Martínez-Rodríguez, Fidencio Mejía-Nepomuceno, María Guadalupe de Jesús Mireles-Rivera, Gloria María Molina-Salinas, Héctor Montoya-Fuentes, Mario Mújica-Sánchez, José Esteban Muñoz-Medina, José de Jesús Nuñez-Contreras, Ilse Patricia Salinas-Peralta, Bruno Tonatiuh Rivas-Santiago, Mauricio Rosales-Rivera, Jorge Salas-Hernández, Ángel Gustavo Salas-Lais, Alejandro Sánchez-Flores, Clara Esperanza Santacruz-Tinoco, Nelly Sélem-Mojica, Blanca Taboada, Gloria Vázquez, Joel Armando Vázquez-Pérez.

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Yucatan

text: hCoV-19/Mexico/YUC_LANGEBIO_IMSS_0407/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Quintana Roo

text: hCoV-19/Mexico/ROO_LANGEBIO_IMSS_0416/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Quintana Roo

text: hCoV-19/Mexico/ROO_LANGEBIO_IMSS_0576/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Colima

text: hCoV-19/Mexico/COL_LANGEBIO_IMSS_0687/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Sinaloa

text: hCoV-19/Mexico/SIN_LANGEBIO_IMSS_0688/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Colima

text: hCoV-19/Mexico/COL_LANGEBIO_IMSS_0709/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Mexico City

text: hCoV-19/Mexico/CMX_LANGEBIO_IMSS_0666/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Mexico City

text: hCoV-19/Mexico/CMX_LANGEBIO_IMSS_0667/2022

text: Homo sapiens

text: mucus

text: Nasopharynge and oropharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Nasopharyngeal and oropharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Quintana Roo

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Quintana Roo

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Mexico City

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Quintana Roo

text: hCoV-19/Mexico/ROO_CIAD-IMSS-1022998-UIMY/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: San Luis Potosi

text: hCoV-19/Mexico/SLP_LANGEBIO_IMSS_13704/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: San Luis Potosi

text: hCoV-19/Mexico/SLP_LANGEBIO_IMSS_13705/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Quintana Roo

text: hCoV-19/Mexico/ROO_LANGEBIO_IMSS_13616/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Yucatan

text: hCoV-19/Mexico/YUC_LANGEBIO_IMSS_13920/2022

text: Homo sapiens

text: mucus

text: Pharynge / Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: female

text: not applicable

text: Swab

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Yucatan

text: hCoV-19/Mexico/YUC_LANGEBIO_IMSS_13924/2022

text: Homo sapiens

text: mucus

text: Pharynge / Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: Severe acute respiratory syndrome coronavirus 2

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Quintana Roo

text: hCoV-19/Mexico/ROO_LANGEBIO_IMSS_13935/2022

text: Homo sapiens

text: mucus

text: Pharynge / Nasopharynge

text: mucus

text: not collected

text: Ambulatory

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: Pharyngeal / Nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Jalisco

text: hCoV-19/Mexico/JAL_LANGEBIO_IMSS_13637/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: Consorcio Mexicano de Vigilancia Genomica (CoViGen-Mex). Julio Elías Alvarado-Yaah, Carlos F. Arias, Eduardo Becerril-Vargas, David Alejandro Cabrera-Gaytán, Guillermo Corona Armenta, Cristóbal Cháidez-Quiróz, Hermilo Domínguez-Zarate, Julissa Enciso-Ibarra, Gloria Espinosa-Ayala, Daniel Fregoso-Rueda, Alejandra García-Gasca, Rodrigo García-López, Bruno Gómez-Gil, Jean Pierre González, Irvin González-López, Ricardo Grande, Alfredo Herrera-Estrella, Carla Ivón Herrera-Nájera, Beatriz Jiménez-Moraila, Daniel Lira-Morales, Brenda Irasema Maldonado-Meza, María Guadalupe Márquez-Rosales, Julio César Martínez-Álvarez, Bernardo Martínez-Miguel, Gabriela Bibiana Martínez-Morales, Célida Martínez-Rodríguez, Fidencio Mejía-Nepomuceno, María Guadalupe de Jesús Mireles-Rivera, Gloria María Molina-Salinas, Héctor Montoya-Fuentes, Mario Mújica-Sánchez, José Esteban Muñoz-Medina, José de Jesús Nuñez-Contreras, Ilse Patricia Salinas-Peralta, Bruno Tonatiuh Rivas-Santiago, Mauricio Rosales-Rivera, Jorge Salas-Hernández, Ángel Gustavo Salas-Lais, Alejandro Sánchez-Flores, Clara Esperanza Santacruz-Tinoco, Nelly Sélem-Mojica, Blanca Taboada, Gloria Vázquez, Joel Armando Vázquez-Pérez.

text: not collected

text: not collected


text: Instituto de Biotecnologia

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Instituto Mexicano del Seguro Social

text: not collected

text: Nasopharyngeal swab

text: not collected

text: not collected

text: not collected

text: Sample collected in public hospitals

text: not collected

text: not collected

text: Mexico: Jalisco

text: hCoV-19/Mexico/JAL_LANGEBIO_IMSS_13638/2022

text: Homo sapiens

text: mucus

text: Nasopharynge

text: mucus

text: not collected

text: Hospitalized

text: not collected

text: not collected

text: male

text: not applicable

text: Swab

text: nasopharyngeal swab

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not collected

text: not collected

text: Genomic surveillance

text: variant determination

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected