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text: human gut metagenome


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text: missing

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text: human gut metagenome


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text: MIMARKS.survey

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text: missing

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text: human gut metagenome


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text: missing

text: Ethiopia

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text: human gut metagenome


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text: MIMARKS.survey

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text: missing

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text: 9.0192 N 38.7525 E

text: human gut metagenome


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text: live

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text: MIMARKS.survey

text: Control

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text: missing

text: Ethiopia

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text: 9.0192 N 38.7525 E

text: human gut metagenome


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text: live

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text: MIMARKS.survey

text: Control

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text: missing

text: Ethiopia

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text: 9.0192 N 38.7525 E

text: human gut metagenome


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text: MIMARKS.survey

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text: missing

text: Ethiopia

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text: human gut metagenome


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text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

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text: missing

text: Ethiopia

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text: 9.0192 N 38.7525 E

text: human gut metagenome


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text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

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text: missing

text: Ethiopia

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text: 9.0192 N 38.7525 E

text: human gut metagenome


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text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

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text: missing

text: Ethiopia

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text: 9.0192 N 38.7525 E

text: human gut metagenome


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text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Control

text: missing

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text: missing

text: Ethiopia

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text: 9.0192 N 38.7525 E

text: human gut metagenome


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text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Control

text: missing

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text: missing

text: Ethiopia

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text: 9.0192 N 38.7525 E

text: human gut metagenome


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text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

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text: missing

text: Ethiopia

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text: 9.0192 N 38.7525 E

text: human gut metagenome


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text: live

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text: MIMARKS.survey

text: Control

text: missing

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text: missing

text: Ethiopia

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text: 9.0192 N 38.7525 E

text: human gut metagenome


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text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Control

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text: missing

text: Ethiopia

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text: 9.0192 N 38.7525 E

text: human gut metagenome


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text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Control

text: missing

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text: missing

text: Ethiopia

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text: 9.0192 N 38.7525 E

text: human gut metagenome


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text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Control

text: missing

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text: missing

text: Ethiopia

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text: 9.0192 N 38.7525 E

text: human gut metagenome


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text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Control

text: missing

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text: missing

text: Ethiopia

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text: 9.0192 N 38.7525 E

text: human gut metagenome


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text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Control

text: missing

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text: missing

text: Ethiopia

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text: 9.0192 N 38.7525 E

text: human gut metagenome


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text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Control

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text: missing

text: Ethiopia

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text: 9.0192 N 38.7525 E

text: human gut metagenome


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text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Control

text: missing

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text: missing

text: Ethiopia

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text: 9.0192 N 38.7525 E

text: human gut metagenome


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text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Control

text: missing

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text: missing

text: Ethiopia

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text: 9.0192 N 38.7525 E

text: human gut metagenome


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text: MIMARKS.survey

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text: Ethiopia

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text: human gut metagenome


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text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Control

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text: missing

text: Ethiopia

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text: 9.0192 N 38.7525 E

text: human gut metagenome


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text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

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text: missing

text: Ethiopia

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text: 9.0192 N 38.7525 E

text: human gut metagenome


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text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

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text: missing

text: Ethiopia

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text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 734

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 735

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 736

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 737

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 738

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Control

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 739

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 740

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Control

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 741

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 742

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 743

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 744

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 745

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Control

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 746

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 747

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 748

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 749

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 750

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 751

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 752

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 753

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 754

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 755

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 756

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 757

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 758

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Control

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 759

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Control

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 760

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Control

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 761

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 762

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Control

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 763

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Control

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 764

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Control

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 765

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Control

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 766

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 767

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 768

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Control

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 769

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Control

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 770

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 771

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 772

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 773

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 774

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 775

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Control

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 776

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Control

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 777

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Control

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 778

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 779

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 780

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 781

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 782

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 783

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Control

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 784

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Control

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 785

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Control

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 786

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Case

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 787

text: 9.0192 N 38.7525 E

text: human gut metagenome


text: Jimma University

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Control

text: missing

text: missing

text: missing

text: Ethiopia

text: Homo sapiens 788

text: 9.0192 N 38.7525 E

text: human gut metagenome


mouse stool

text: Technical University of Munich

text: live

text: Metagenome or environmental

text: Austria: Innsbruck

text: Mus musculus

text: mouse feces

text: 47.2692 N 11.4041 E

text: mouse gut metagenome

text: Metagenome or environmental sample from mouse gut metagenome


Arisaema amurense

text: China Academy of Chinese Medical Sciences

text: live

text: Plant

text: 4.5 months

text: China:Jilin

text: araceae

characteristic: isolate

text: Arisaema amurense

text: leaf

characteristic: tissue

text: Plant sample from Arisaema amurense


text: Kunming Institute of Botany, Chinese Academy of Sciences

text: live

text: Plant

text: Wild

characteristic: cultivar

text: maturation

text: China:Mengla, Yunnan Province

text: Antiaris toxicaria

text: leaf

text: Plant sample from Antiaris toxicaria


text: PulseNet Next Generation Subtyping Methods Unit

text: live

text: Pathogen.cl

text: CDC

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: PulseNet

text: Texas Department of State Health Services

text: missing

characteristic: serovar

text: human

characteristic: strain

text: Salmonella enterica


characteristic: External Id

text: University Libre de Bruxelles

characteristic: INSDC center name

text: live

text: Invertebrate

text: 1 week

characteristic: age

text: Worker raised in microcolonies (5 bees) with no queen and no treatment. Aged of 1 week.

text: Belgium

text: Week1 control worker replicate 1

text: BIOBEST commercial colonies

text: Bombus terrestris

text: female

characteristic: sex

text: whole body

text: Week1 control worker replicate 1


text: University Libre de Bruxelles

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Invertebrate

text: 1 week

text: Belgium

text: Week1 control worker replicate 2

text: BIOBEST commercial colonies

text: Bombus terrestris

text: female

text: whole body

text: Week1 control worker replicate 2


text: University Libre de Bruxelles

text: live

text: Invertebrate

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: 1 week

characteristic: description

text: Belgium

text: Week1 control worker replicate 3

text: BIOBEST commercial colonies

text: Bombus terrestris

text: female

text: whole body

text: Week1 control worker replicate 3


text: University Libre de Bruxelles

text: live

text: Invertebrate

text: 4 weeks

text: Worker raised in microcolonies (5 bees) with no queen and no treatment. Aged of 4 weeks.

text: Belgium

text: Week4 control worker replicate 1

characteristic: isolate

text: BIOBEST commercial colonies

text: Bombus terrestris

characteristic: organism

text: female

text: whole body

text: Week4 control worker replicate 1

characteristic: title


text: University Libre de Bruxelles

text: live

text: Invertebrate

text: 4 weeks

text: Belgium

text: Week4 control worker replicate 2

text: BIOBEST commercial colonies

text: Bombus terrestris

text: female

text: whole body

characteristic: tissue

text: Week4 control worker replicate 2


text: University Libre de Bruxelles

text: live

text: Invertebrate

text: 4 weeks

text: Belgium

text: Week4 control worker replicate 3

text: BIOBEST commercial colonies

text: Bombus terrestris

text: female

text: whole body

text: Week4 control worker replicate 3


text: University Libre de Bruxelles

text: live

text: Invertebrate

text: 1 week

text: Worker raised in microcolonies (5 bees) with no queen and treated once with RG108. One week after treatment.

text: Belgium

text: Week1 RG108 treated worked replicate 1

text: BIOBEST commercial colonies

text: Bombus terrestris

text: female

text: whole body

text: Week1 RG108 treated worked replicate 1


text: University Libre de Bruxelles

text: live

text: Invertebrate

text: 1 week

text: Belgium

text: Week1 RG108 treated worked replicate 2

text: BIOBEST commercial colonies

text: Bombus terrestris

text: female

text: whole body

text: Week1 RG108 treated worked replicate 2


text: University Libre de Bruxelles

text: live

text: Invertebrate

text: 1 week

text: Belgium

text: Week1 RG108 treated worked replicate 3

text: BIOBEST commercial colonies

text: Bombus terrestris

text: female

text: whole body

text: Week1 RG108 treated worked replicate 3


text: University Libre de Bruxelles

text: live

text: Invertebrate

text: 4 weeks

text: Worker raised in microcolonies (5 bees) with no queen and treated once with RG108. Four weeks after treatment.

text: Belgium

text: Week4 RG108 treated worked replicate 1

text: BIOBEST commercial colonies

text: Bombus terrestris

text: female

text: whole body

text: Week4 RG108 treated worked replicate 1


text: University Libre de Bruxelles

text: live

text: Invertebrate

text: 4 weeks

text: Belgium

text: Week4 RG108 treated worked replicate 2

text: BIOBEST commercial colonies

text: Bombus terrestris

text: female

text: whole body

text: Week4 RG108 treated worked replicate 2


text: University Libre de Bruxelles

text: live

text: Invertebrate

text: 4 weeks

text: Belgium

text: Week4 RG108 treated worked replicate 3

text: BIOBEST commercial colonies

text: Bombus terrestris

text: female

text: whole body

text: Week4 RG108 treated worked replicate 3


text: live

text: Microbe, viral or environmental

text: Not applicable

text: Spain: Mallorca

text: Homo sapiens sapiens

characteristic: host

text: Spleen

text: spleen

text: 39.6953 N 3.0176 E

text: Leishmania infantum

text: Culture

characteristic: strain

text: Microbe sample from Leishmania infantum


characteristic: External Id

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: Not applicable

text: Not applicable

text: Canis lupus familiaris

text: Skin

text: skin

text: Not applicable

text: Leishmania infantum

text: Culture

text: Microbe sample from Leishmania infantum


text: live

text: Microbe, viral or environmental

text: Not applicable

text: Spain: Zaragoza

text: Canis lupus familiaris

text: Lymph node

text: lymph node

text: 41.6488 N 0.8891 W

text: Leishmania infantum

text: Culture

text: Microbe sample from Leishmania infantum


text: live

text: Microbe, viral or environmental

text: Istituto Zooprofilattico sperimentale della Sicilia

text: Italy: Sardegna

text: Canis lupus familiaris

text: Not applicable

text: Not applicable

text: 40.1209 N 9.0129 E

text: Leishmania infantum

text: Culture

text: Microbe sample from Leishmania infantum


text: live

text: Microbe, viral or environmental

text: Italy: Sicily

text: Homo sapiens sapiens

text: Exsudate

text: Exsudate

text: 37.6000 N 14.0154 E

text: Leishmania infantum

text: Culture

text: Microbe sample from Leishmania infantum


text: live

text: Microbe, viral or environmental

text: Italy: Sicily

text: Canis lupus familiaris

text: Not applicable

text: Not applicable

text: 37.6000 N 14.0154 E

text: Leishmania infantum

text: Culture

text: Microbe sample from Leishmania infantum


text: live

text: Microbe, viral or environmental

text: Instituto de Higiene e Medicina Tropical (IHMT)

text: Portugal: Evora

text: Canis lupus familiaris

text: Bone marrow, lymph node

text: Bone marrow, lymph node

text: 39.3999 N 8.2245 W

text: Leishmania infantum

text: Culture

text: Microbe sample from Leishmania infantum


text: live

text: Microbe, viral or environmental

text: Portugal: Loures

text: Canis lupus familiaris

text: Lymph node

text: lymph node

text: 39.3999 N 8.2245 W

text: Leishmania infantum

text: Culture

text: Microbe sample from Leishmania infantum


text: live

text: Microbe, viral or environmental

text: Portugal: Setubal

text: Canis lupus familiaris

text: Lymph node

text: lymph node

text: 39.3999 N 8.2245 W

text: Leishmania infantum

text: Culture

text: Microbe sample from Leishmania infantum


text: live

text: Microbe, viral or environmental

text: Instituto de Salud Carlos III

text: Not applicable

text: Spain: Madrid

text: Homo sapiens sapiens

text: Skin

text: skin

text: 40.4168 N 3.7038 W

text: Leishmania infantum

text: Culture

text: Microbe sample from Leishmania infantum


text: live

text: Microbe, viral or environmental

text: Instituto de Salud Carlos III

text: Not applicable

text: Spain: Madrid

text: Homo sapiens sapiens

text: Blood

text: blood

text: 40.4168 N 3.7038 W

text: Leishmania infantum

text: Culture

text: Microbe sample from Leishmania infantum


text: live

text: Microbe, viral or environmental

text: Vetgenomics S.L

text: Not applicable

text: Spain: Catalunya

text: Canis lupus familiaris

text: Popliteo ganglium

text: Popliteo ganglium

text: 41.5912 N 1.5209 E

text: Leishmania infantum

text: Culture

text: Microbe sample from Leishmania infantum


text: live

text: Microbe, viral or environmental

text: Hospital Veterinario de la Universidad Catolica de Valencia

text: Spain: Valencia

text: Canis lupus familiaris

text: Bone marrow

text: bone marrow

text: 39.4699 N 0.3763 W

text: Leishmania infantum

text: Culture

text: Microbe sample from Leishmania infantum


text: live

text: Microbe, viral or environmental

text: Laboratory for Zoonotic and Vector-Borne diseases - Koret School of Veterinary Medicine

text: Israel

text: Equus caballus

text: Not applicable

text: Not applicable

text: 31.0461 N 34.8516 E

text: Leishmania infantum

text: Culture

text: Not applicable

text: Microbe sample from Leishmania infantum


text: live

text: Microbe, viral or environmental

text: Israel

text: Canis lupus familiaris

text: Not applicable

text: Not applicable

text: 31.0461 N 34.8516 E

text: Leishmania infantum

text: Culture

text: Microbe sample from Leishmania infantum


text: live

text: Microbe, viral or environmental

text: ATCC

text: Tunisia: Monastir

text: Homo sapiens sapiens

text: Not applicable

text: Not applicable

text: 33.8869 N 9.5375 E

text: Leishmania infantum

text: DNA

text: MHOM/TN/80/IPT-1 (ATCC 50134D)

text: Microbe sample from Leishmania infantum


text: live

text: Microbe, viral or environmental

text: Italy: Sicily

text: Homo sapiens sapiens

text: Skin

text: skin

text: 37.6000 N 14.0154 E

text: Leishmania infantum

text: Culture

text: Microbe sample from Leishmania infantum


text: live

text: Microbe, viral or environmental

text: Hospital Clinic Veterinari UAB (HCV)

text: Spain: Catalunya

text: Canis lupus familiaris

text: Lymph node

text: lymph node

text: 41.5912 N 1.5209 E

text: Leishmania infantum

text: Culture

text: Microbe sample from Leishmania infantum


text: University of the Philippines Diliman

text: live

text: MIMS.me

text: 1 m

characteristic: depth

text: Keywords: GSC:MIxS;MIMS:6.0

text: Freshwater; built environment

text: Deep well

text: Water

text: Philippines: Caloocan

text: 14.77872671 N 121.03598853 E

text: freshwater metagenome


text: University of the Philippines Diliman

characteristic: INSDC first public

text: live

text: MIMS.me

text: 1 m

text: Keywords: GSC:MIxS;MIMS:6.0

text: Freshwater; built environment

text: Deep well

text: Water

text: Philippines: Cavite

text: 14.25001306 N 121.03678756 E

text: freshwater metagenome


BLANK

text: Yunnan Agricultural University

characteristic: INSDC last update

text: live

text: Model organism or animal

text: 5 weeks

characteristic: age

text: RPMI 1640

text: BALB/C

characteristic: ecotype

text: China: Kunming

text: Bone marrow-derived dendritic cells RPMI1640 from the same mouse were cultured completely in culture medium.

text: Mus musculus

text: male

characteristic: sex

text: Tibial bone marrow

text: Model organism or animal sample from Mus musculus


LPS

text: Yunnan Agricultural University

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 5 weeks

text: LPS 1 ug/ml

text: BALB/C

text: China: Kunming

text: Bone marrow-derived dendritic cells RPMI1640 from the same mouse were cultured completely in medium and stimulated with LPS 1 ug/ml for 48h.

text: Mus musculus

text: male

text: Tibial bone marrow


text: Yunnan Agricultural University

text: live

text: Model organism or animal

characteristic: SRA accession

text: 5 weeks

text: Moringa leaf protein 50 ug/ml

characteristic: description

text: BALB/C

text: China: Kunming

text: Bone marrow-derived dendritic cells RPMI1640 from the same mouse were cultured completely in medium and stimulated with moringa leaf protein 50 ug/ml for 48h.

characteristic: isolate

text: Mus musculus

characteristic: organism

text: male

text: Tibial bone marrow


text: Yunnan Agricultural University

text: live

text: Model organism or animal

text: 5 weeks

text: Moringa leaf protein 100 ug/ml

text: BALB/C

text: China: Kunming

text: Bone marrow-derived dendritic cells RPMI1640 from the same mouse were cultured completely in medium and stimulated with moringa leaf protein 100 ug/ml for 48h.

text: Mus musculus

text: male

text: Tibial bone marrow

characteristic: tissue

characteristic: title


characteristic: External Id

text: Yunnan Agricultural University

characteristic: INSDC center name

text: live

text: Model organism or animal

text: 5 weeks

text: Moringa leaf protein 100 ug/ml, repetition

text: BALB/C

text: China: Kunming

text: Bone marrow-derived dendritic cells RPMI1640 from the same mouse were cultured completely in medium and stimulated with moringa leaf protein 100 ug/ml for 48h. This is a repetition.

text: Mus musculus

text: male

text: Tibial bone marrow


text: Yunnan Agricultural University

characteristic: INSDC first public

text: live

text: Model organism or animal

text: 5 weeks

text: Moringa leaf protein 200 ug/ml

text: BALB/C

text: China: Kunming

text: Bone marrow-derived dendritic cells RPMI1640 from the same mouse were cultured completely in medium and stimulated with moringa leaf protein 200 ug/ml for 48h.

text: Mus musculus

text: male

text: Tibial bone marrow


text: Shanghai Pulmonary Hospital

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: China

text: Homo sapiens

characteristic: host

text: pure culture

text: Newman

characteristic: strain

text: Microbe sample from Staphylococcus aureus subsp. aureus str. Newman


text: Shanghai Pulmonary Hospital

text: live

text: Microbe, viral or environmental

text: China

text: laboratory

text: Staphylococcus aureus

text: pure culture

text: NewmanDt

text: Microbe sample from Staphylococcus aureus


text: Shanghai Pulmonary Hospital

text: live

text: Microbe, viral or environmental

text: China

text: Homo sapiens

text: Staphylococcus aureus

text: pure culture


text: Shanghai Pulmonary Hospital

text: live

text: Microbe, viral or environmental

text: China

text: laboratory

text: Staphylococcus aureus

text: pure culture


text: Centers for Disease Control and Prevention Enteric Diseases Laboratory Branch

text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Vibrio parahaemolyticus

text: PulseNet

text: missing

text: missing

characteristic: serovar

text: human

text: Vibrio parahaemolyticus


text: PulseNet Next Generation Subtyping Methods Unit

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: Salmonella enterica


text: live

characteristic: INSDC status

text: Pathogen.cl

text: CDC

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: PulseNet

text: Texas Department of State Health Services

text: missing

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

characteristic: NCBI submission model

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Campylobacter jejuni

text: missing

text: Campylobacter jejuni


text: live

text: Pathogen.cl

characteristic: NCBI submission package

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: Salmonella enterica


text: live

text: Pathogen.cl

characteristic: SRA accession

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Escherichia coli

text: missing

text: Escherichia coli


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Shigella flexneri

text: missing

text: Shigella flexneri


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Shigella sonnei

text: missing

text: Shigella sonnei


ADI IsletCore R517

text: University of Alberta

text: live

text: Human

characteristic: age

text: ADI IsletCore

text: Canada: Edmonton

text: Homo sapiens

text: female

characteristic: sex

text: pancreatic islets of Langerhans

text: Human sample from Homo sapiens


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

characteristic: isolate

text: missing

text: missing

text: missing

text: Campylobacter jejuni

characteristic: organism

text: missing

text: Campylobacter jejuni


text: Technical University of Munich

text: live

text: Metagenome or environmental

text: Austria: Innsbruck

text: Mus musculus

text: stool

text: 47.2692 N 11.4041 E

text: mouse gut metagenome

text: WT 1

characteristic: title


characteristic: External Id

text: Technical University of Munich

text: live

text: Metagenome or environmental

text: Austria: Innsbruck

text: Mus musculus

text: stool

text: 47.2692 N 11.4041 E

text: mouse gut metagenome

text: WT 2


text: Technical University of Munich

characteristic: INSDC center name

text: live

text: Metagenome or environmental

text: Austria: Innsbruck

text: Mus musculus

text: stool

text: 47.2692 N 11.4041 E

text: mouse gut metagenome

text: WT 3


text: Technical University of Munich

characteristic: INSDC first public

text: live

text: Metagenome or environmental

text: Austria: Innsbruck

text: Mus musculus

text: stool

text: 47.2692 N 11.4041 E

text: mouse gut metagenome

text: WT 4


text: Technical University of Munich

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: Austria: Innsbruck

text: Mus musculus

text: stool

text: 47.2692 N 11.4041 E

text: mouse gut metagenome

text: LCN 1


text: Technical University of Munich

text: live

text: Metagenome or environmental

text: Austria: Innsbruck

text: Mus musculus

characteristic: host

text: stool

text: 47.2692 N 11.4041 E

text: mouse gut metagenome

text: LCN 2


text: Technical University of Munich

text: live

text: Metagenome or environmental

text: Austria: Innsbruck

text: Mus musculus

text: stool

text: 47.2692 N 11.4041 E

text: mouse gut metagenome

text: LCN 3


text: Technical University of Munich

text: live

text: Metagenome or environmental

text: Austria: Innsbruck

text: Mus musculus

text: stool

text: 47.2692 N 11.4041 E

text: mouse gut metagenome

text: LCN 4


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Shigella sonnei

characteristic: strain

text: Shigella sonnei


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Escherichia coli

characteristic: serovar

text: Escherichia coli


text: FDA CVM NARMS - Tennesse DOH

text: live

text: SARS-CoV-2: clinical or host-associated

text: Tennessee Department of Health Laboratory Services

text: USA: Tennessee

text: Homo sapiens

text: clinical

text: Baseline surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: FDA CVM NARMS - Tennesse DOH

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Tennessee

text: Homo sapiens

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Baseline surveillance


characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Vibrio parahaemolyticus

text: PulseNet

text: missing

text: missing

text: human

text: Vibrio parahaemolyticus


MORA

text: University of Mosul

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: Iraq: Mosul

text: urine

text: Proteus mirabilis

text: whole organism

text: Microbe sample from Proteus mirabilis


text: live

text: Pathogen.cl

characteristic: NCBI submission model

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: Salmonella enterica


text: Universtity Hospital Cologne

text: live

text: Pathogen.cl

characteristic: NCBI submission package

text: National Reference Centre for multidrug-resistant gram-negative bacteria for Germany

text: unknown

text: Germany

text: Homo sapiens

text: unknown

text: not applicable

text: unknown

text: Serratia marcescens


text: Universtity Hospital Cologne

text: live

text: Pathogen.cl

text: Hamprecht group, University Hospital Cologne

text: unknown

text: Germany

text: Homo sapiens

text: unknown

text: not applicable

text: 50.91705971 N 6.90202729 E

text: Citrobacter freundii

text: Pathogen: clinical or host-associated sample from Citrobacter freundii


text: Universtity Hospital Cologne

text: live

text: Pathogen.cl

text: unknown

text: Germany

text: Homo sapiens

text: unknown

text: not applicable

text: 50.91705971 N 6.90202729 E

text: Enterobacter cloacae

text: Pathogen: clinical or host-associated sample from Enterobacter cloacae


text: Universtity Hospital Cologne

text: live

text: Pathogen.cl

text: unknown

text: Germany

text: Homo sapiens

text: unknown

text: not applicable

text: 50.91705971 N 6.90202729 E

text: Klebsiella pneumoniae

text: Pathogen: clinical or host-associated sample from Klebsiella pneumoniae


text: Universtity Hospital Cologne

text: live

text: Pathogen.cl

text: unknown

text: Germany

text: Homo sapiens

text: unknown

text: not applicable

text: unknown

text: Citrobacter freundii


text: Universtity Hospital Cologne

text: live

text: Pathogen.cl

text: unknown

text: Germany

text: Homo sapiens

text: unknown

text: not applicable

text: unknown

text: Klebsiella pneumoniae


text: Universtity Hospital Cologne

text: live

text: Pathogen.cl

text: unknown

text: Germany

text: Homo sapiens

text: unknown

text: not applicable

text: unknown

text: Providencia stuartii


text: Universtity Hospital Cologne

text: live

text: Pathogen.cl

text: unknown

text: Germany

text: Homo sapiens

text: unknown

text: not applicable

text: unknown

text: Escherichia coli


text: Universtity Hospital Cologne

text: live

text: Pathogen.cl

text: unknown

text: Germany

text: Homo sapiens

text: unknown

text: not applicable

text: 50.91705971 N 6.90202729 E

text: Klebsiella aerogenes

text: Pathogen: clinical or host-associated sample from Klebsiella aerogenes


text: Universtity Hospital Cologne

text: live

text: Pathogen.cl

text: unknown

text: Germany

text: Homo sapiens

text: unknown

text: not applicable

text: 50.91705971 N 6.90202729 E

text: Enterobacter sp. CRENT-193

text: Pathogen: clinical or host-associated sample from Enterobacter sp. CRENT-193


text: Universtity Hospital Cologne

text: live

text: Pathogen.cl

text: unknown

text: Germany

text: Homo sapiens

text: unknown

text: not applicable

text: 50.91705971 N 6.90202729 E

text: Enterobacter hormaechei

text: Pathogen: clinical or host-associated sample from Enterobacter hormaechei


text: Universtity Hospital Cologne

text: live

text: Pathogen.cl

text: unknown

text: Germany

text: Homo sapiens

text: unknown

text: not applicable

text: 50.91705971 N 6.90202729 E

text: Escherichia coli

text: Pathogen: clinical or host-associated sample from Escherichia coli


text: Universtity Hospital Cologne

text: live

text: Pathogen.cl

text: unknown

text: Germany

text: Homo sapiens

text: unknown

text: not applicable

text: unknown

text: Citrobacter braakii


text: Universtity Hospital Cologne

text: live

text: Pathogen.cl

text: unknown

text: Germany

text: Homo sapiens

text: unknown

text: not applicable

text: unknown

text: Proteus mirabilis


text: Universtity Hospital Cologne

text: live

text: Pathogen.cl

text: unknown

text: Germany

text: Homo sapiens

text: unknown

text: not applicable

text: unknown

text: Providencia rettgeri


text: Universtity Hospital Cologne

text: live

text: Pathogen.cl

text: Goettig group, University Hospital Frankfurt

text: unknown

text: Germany

text: Homo sapiens

text: unknown

text: not applicable

text: 50.09560920 N 8.66573555 E

text: Klebsiella pneumoniae


text: Universtity Hospital Cologne

text: live

text: Pathogen.cl

text: unknown

text: Germany

text: Homo sapiens

text: unknown

text: not applicable

text: 50.91705971 N 6.90202729 E

text: Serratia marcescens

text: Pathogen: clinical or host-associated sample from Serratia marcescens


text: Universtity Hospital Cologne

text: live

text: Pathogen.cl

text: unknown

text: Germany

text: Homo sapiens

text: unknown

text: not applicable

text: unknown

text: Klebsiella oxytoca


text: Universtity Hospital Cologne

text: live

text: Pathogen.cl

text: unknown

text: Germany

text: Homo sapiens

text: unknown

text: not applicable

text: 50.91705971 N 6.90202729 E

text: Citrobacter freundii


text: Universtity Hospital Cologne

text: live

text: Pathogen.cl

text: unknown

text: Germany

text: Homo sapiens

text: unknown

text: not applicable

text: unknown

text: Serratia marcescens


text: Universtity Hospital Cologne

text: live

text: Pathogen.cl

text: unknown

text: Germany

text: Homo sapiens

text: unknown

text: not applicable

text: 50.91705971 N 6.90202729 E

text: Enterobacter cloacae


text: Universtity Hospital Cologne

text: live

text: Pathogen.cl

text: unknown

text: Germany

text: Homo sapiens

text: unknown

text: not applicable

text: 50.91705971 N 6.90202729 E

text: Hafnia alvei

text: Pathogen: clinical or host-associated sample from Hafnia alvei


text: Universtity Hospital Cologne

text: live

text: Pathogen.cl

text: unknown

text: Germany

text: Homo sapiens

text: unknown

text: not applicable

text: 50.91705971 N 6.90202729 E

text: Klebsiella oxytoca

text: Pathogen: clinical or host-associated sample from Klebsiella oxytoca


text: Universtity Hospital Cologne

text: live

text: Pathogen.cl

text: unknown

text: Germany

text: Homo sapiens

text: unknown

text: not applicable

text: 50.91705971 N 6.90202729 E

text: Klebsiella pneumoniae


text: University of Cambridge

text: live

text: Human

characteristic: SRA accession

text: 6 years

text: Turner Lab, Department of Pathology, University of Cambridge

text: not provided

text: ALK+ anaplastic large cell lymphoma

characteristic: disease

text: not provided

text: Homo sapiens

text: tissue sample

text: female

text: pleural effusion

characteristic: tissue

text: MGS diagnostic sample

text: untreated

characteristic: treatment


text: University of Cambridge

text: live

text: Human

text: 6 years

characteristic: age

text: not provided

text: ALK+ anaplastic large cell lymphoma

text: not provided

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: PDX tumour

text: female

characteristic: sex

text: bone marrow

text: MGS PDX, vehicle treated

text: vehicle


characteristic: External Id

text: University of Cambridge

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Human

text: 6 years

text: not provided

text: ALK+ anaplastic large cell lymphoma

text: not provided

text: Homo sapiens

text: PDX tumour

text: female

text: bone marrow

text: MGS PDX, crizotinib treated

characteristic: title

text: crizotinib


text: University of Cambridge

characteristic: INSDC last update

text: live

text: Human

text: 6 years

text: not provided

text: ALK+ anaplastic large cell lymphoma

text: not provided

text: Homo sapiens

text: PDX tumour

text: female

text: bone marrow

text: MGS PDX, brigatinib treated

text: brigatinib


text: University of Cambridge

characteristic: INSDC secondary accession

text: live

text: Human

text: 5 years

text: not provided

text: ALK+ anaplastic large cell lymphoma

text: not provided

text: Homo sapiens

text: tissue sample

text: male

text: tumour

text: MTK diagnostic sample

text: untreated


text: University of Cambridge

text: live

characteristic: INSDC status

text: Human

text: 5 years

text: not provided

text: ALK+ anaplastic large cell lymphoma

text: not provided

text: Homo sapiens

text: PDX tumour

text: male

text: pleural effusion

text: MTK PDX, vehicle treated

text: vehicle


text: University of Cambridge

text: live

text: Human

characteristic: NCBI submission model

text: 16 years

text: Gustave Roussy Cancer Centre

text: not provided

text: ALK+ anaplastic large cell lymphoma

text: not provided

text: Homo sapiens

text: tissue sample

text: male

text: normal tissue

text: GR-ALCL-1 germline sample

text: untreated


text: University of Cambridge

text: live

text: Human

characteristic: NCBI submission package

text: 16 years

text: Gustave Roussy Cancer Centre

text: not provided

text: ALK+ anaplastic large cell lymphoma

text: not provided

text: Homo sapiens

text: tissue sample

text: male

text: paravertebral lymph node

text: GR-ALCL-1 relapse sample

text: untreated


text: University of Cambridge

text: live

text: Human

characteristic: SRA accession

text: 16 years

text: Gustave Roussy Cancer Centre

text: not provided

text: ALK+ anaplastic large cell lymphoma

text: not provided

text: Homo sapiens

text: PDX tumour

text: male

text: paravertebral lymph node

text: GR-ALCL-1 PDX, untreated

text: untreated


text: PulseNet Next Generation Subtyping Methods Unit

text: live

text: Pathogen.cl

text: CDC

text: missing

text: USA

text: missing

characteristic: host

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: PulseNet

text: Texas Department of State Health Services

text: missing

characteristic: serovar

text: human

characteristic: strain

text: Salmonella enterica


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: Campylobacter jejuni

text: missing

text: Campylobacter jejuni


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Campylobacter upsaliensis

text: missing

text: Campylobacter upsaliensis


Vibrio diabolicus NVE-VD1

text: University of North Carolina

text: live

text: Microbe, viral or environmental

text: USA: Baruch, South Carolina

text: Nematostella vectensis

text: Vibrio diabolicus

text: isolate

text: Microbe sample from Vibrio diabolicus


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: Hadar

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: enteritidis

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: IIIa 41:z4,z23:-

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: I 4:i:-

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: Needs further review

text: Salmonella enterica


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: missing

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: Salmonella enterica


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Escherichia coli

text: missing

text: missing

text: missing

text: human

text: Escherichia coli


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: Escherichia coli

text: Escherichia coli


text: live

text: Pathogen.cl

text: CDC

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: Salmonella enterica


text: Centers for Disease Control and Prevention Enteric Diseases Laboratory Branch

text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Vibrio parahaemolyticus

text: PulseNet

text: missing

text: missing

text: human

text: Vibrio parahaemolyticus


text: Victoria University of Wellington

text: live

text: Invertebrate

text: New Zealand: Wellington

text: Capped brood cell of experimental mini-hive

text: Varroa destructor

text: pooled whole body

characteristic: tissue

text: Varroa from non-specific dsRNA treated mini-hive #1


text: Victoria University of Wellington

text: live

text: Invertebrate

text: New Zealand: Wellington

characteristic: isolate

text: Varroa destructor

text: pooled whole body

text: Varroa from non-specific dsRNA treated mini-hive #2


text: Victoria University of Wellington

text: live

text: Invertebrate

text: New Zealand: Wellington

text: Varroa destructor

characteristic: organism

text: pooled whole body

text: Varroa from non-specific dsRNA treated mini-hive #3


text: Victoria University of Wellington

text: live

text: Invertebrate

text: New Zealand: Wellington

text: Varroa destructor

text: pooled whole body

text: Varroa from sugar control treated mini-hive #1


text: Victoria University of Wellington

text: live

text: Invertebrate

text: New Zealand: Wellington

text: Varroa destructor

text: pooled whole body

text: Varroa from sugar control treated mini-hive #3


text: Victoria University of Wellington

text: live

text: Invertebrate

text: New Zealand: Wellington

text: Varroa destructor

text: pooled whole body

text: Varroa from sugar control treated mini-hive #4


text: Victoria University of Wellington

text: live

text: Invertebrate

text: New Zealand: Wellington

text: Varroa destructor

text: pooled whole body

text: Varroa from sugar control treated mini-hive #5


text: Victoria University of Wellington

text: live

text: Invertebrate

text: New Zealand: Wellington

text: Varroa destructor

text: pooled whole body

text: Varroa from DWV-dsRNA treated mini-hive #1


text: Victoria University of Wellington

text: live

text: Invertebrate

text: New Zealand: Wellington

text: Varroa destructor

text: pooled whole body

text: Varroa from DWV-dsRNA treated mini-hive #2


text: Victoria University of Wellington

text: live

text: Invertebrate

text: New Zealand: Wellington

text: Varroa destructor

text: pooled whole body

text: Varroa from DWV-dsRNA treated mini-hive #3


text: Victoria University of Wellington

text: live

text: Invertebrate

text: New Zealand: Wellington

text: Varroa destructor

text: pooled whole body

text: Varroa from DWV-dsRNA treated mini-hive #5


text: Victoria University of Wellington

text: live

text: Invertebrate

text: New Zealand: Wellington

text: Varroa destructor

text: pooled whole body

text: Varroa from DWV-dsRNA treated mini-hive #4


text: centers for disease control and prevention

text: live

text: Pathogen.cl

text: Khyber Punjabakhtunkhwa

text: not applicable

text: not applicable

characteristic: description

text: D

characteristic: genotype

text: Pakistan: Khyber Punjabakhtunkhwa

text: Homo sapiens

text: not provided

text: not provided

text: Hepatitis B

text: not provided

text: not provided

text: not provided

text: not provided

text: not provided

text: not applicable

text: Human Serum

text: not provided

text: Hepatitis B virus

text: not applicable

text: not applicable

characteristic: pathotype

text: not applicable

characteristic: serotype

text: not applicable

text: not applicable

text: not applicable

characteristic: subgroup

text: not applicable

characteristic: subtype

text: not provided


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

text: Khyber Punjabakhtunkhwa

text: not applicable

text: not applicable

text: A

text: Pakistan: Khyber Punjabakhtunkhwa

text: Homo sapiens

text: not provided

text: not provided

text: Hepatitis B

text: not provided

text: not provided

text: not provided

text: not provided

text: not provided

text: not applicable

text: Human Serum

text: not provided

text: Hepatitis B virus

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not provided

characteristic: title


text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Punjab

text: not applicable

text: not applicable

text: D

text: Pakistan: Punjab

text: Homo sapiens

characteristic: host

text: not provided

text: not provided

text: Hepatitis B

text: not provided

text: not provided

text: not provided

text: not provided

text: not provided

text: not applicable

text: Human Serum

text: not provided

text: Hepatitis B virus

text: not applicable

text: not applicable

text: not applicable

text: not applicable

characteristic: serovar

text: not applicable

text: not applicable

text: not applicable

text: not provided


text: live

text: Pathogen.cl

text: Punjab

text: not applicable

text: not applicable

characteristic: description

text: A

characteristic: genotype

text: Pakistan: Punjab

text: Homo sapiens

text: not provided

text: not provided

text: Hepatitis B

text: not provided

text: not provided

text: not provided

text: not provided

text: not provided

text: not applicable

characteristic: isolate

text: Human Serum

text: not provided

text: Hepatitis B virus

characteristic: organism

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

characteristic: strain

text: not applicable

text: not applicable

text: not provided


characteristic: External Id

text: PulseNet Next Generation Subtyping Methods Unit

text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Infantis

text: human

text: Salmonella enterica


characteristic: INSDC center name

text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: enteritidis

text: human

text: Salmonella enterica


characteristic: INSDC first public

text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Newport

text: human

text: Salmonella enterica


characteristic: INSDC last update

text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Typhimurium

text: human

text: Salmonella enterica


characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Baildon

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Blockley

text: human

text: Salmonella enterica

characteristic: title


text: live

characteristic: INSDC status

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Oranienburg

text: human

text: Salmonella enterica


tag: Namespace:Sample name

text: United States Department of Agriculture, Food Safety and Inspection Service

text: live

text: Pathogen.env

characteristic: NCBI submission model

text: USDA-FSIS

text: USA:KY

text: Animal-Swine-Market Swine (cecal)

text: missing

text: Enterococcus faecalis

text: Pathogen: environmental/food/other sample from Enterococcus faecalis


text: live

text: Pathogen.env

characteristic: NCBI submission package

text: USDA-FSIS

text: USA:AR

text: Animal-Chicken-Young Chicken (cecal)

text: missing

text: Enterococcus faecalis


text: live

text: Pathogen.env

characteristic: SRA accession

text: USDA-FSIS

text: USA:PA

text: Animal-Turkey-Young Turkey (cecal)

text: missing

text: Enterococcus faecalis


text: live

text: Pathogen.env

text: USDA-FSIS

text: USA:CA

text: Animal-Turkey-Young Turkey (cecal)

text: missing

text: Enterococcus faecalis


text: live

text: Pathogen.env

text: USDA-FSIS

text: USA:NC

text: Animal-Swine-Sow (cecal)

text: missing

text: Enterococcus faecalis


text: live

text: Pathogen.env

text: USDA-FSIS

text: USA:WI

text: Animal-Turkey-Young Turkey (cecal)

text: missing

text: Enterococcus faecalis


text: live

text: Pathogen.env

text: USDA-FSIS

text: USA:MN

text: Animal-Turkey-Young Turkey (cecal)

text: missing

text: Enterococcus faecalis


text: live

text: Pathogen.env

text: USDA-FSIS

text: USA:WI

text: Animal-Swine-Sow (cecal)

text: missing

text: Enterococcus faecalis


text: live

text: Pathogen.env

text: USDA-FSIS

text: USA:NE

text: Animal-Chicken-Young Chicken (cecal)

text: missing

text: Enterococcus faecalis


text: live

text: Pathogen.env

text: USDA-FSIS

text: USA:VA

text: Animal-Turkey-Young Turkey (cecal)

text: missing

text: Enterococcus faecalis


text: live

text: Pathogen.env

text: USDA-FSIS

text: USA:CA

text: Animal-Chicken-Young Chicken (cecal)

text: missing

text: Enterococcus faecalis


text: live

text: Pathogen.env

text: USDA-FSIS

text: USA:IA

text: Animal-Swine-Market Swine (cecal)

text: missing

text: Enterococcus faecalis


text: live

text: Pathogen.env

text: USDA-FSIS

text: USA:CA

text: Animal-Cattle-Dairy Cow (cecal)

text: missing

text: Enterococcus faecalis


text: live

text: Pathogen.env

text: USDA-FSIS

text: USA:SC

text: Animal-Turkey-Young Turkey (cecal)

text: missing

text: Enterococcus faecalis


text: live

text: Pathogen.env

text: USDA-FSIS

text: USA:IL

text: Animal-Swine-Market Swine (cecal)

text: missing

text: Enterococcus faecalis


text: live

text: Pathogen.env

text: USDA-FSIS

text: USA:AR

text: Animal-Turkey-Young Turkey (cecal)

text: missing

text: Enterococcus faecalis


text: Wadsworth Center - NYS DOH

text: live

text: MLST45 PubMLST

characteristic: MLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

characteristic: host

text: sputum

text: Enterobacter hormaechei

text: whole organism

text: Microbe sample from Enterobacter hormaechei


text: live

text: Pathogen.cl

text: CDC

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Escherichia coli

text: PulseNet

text: Texas Department of State Health Services

text: missing

characteristic: serovar

text: human

text: Escherichia coli


text: Centers for Disease Control and Prevention Enteric Diseases Laboratory Branch

text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Vibrio cholerae

text: PulseNet

text: missing

text: missing

text: human

text: Vibrio cholerae


text: oqxA,oqxB,blaACT,fosA,ble,blaNDM-5,blaSHV-12,tet(A),mph(A),catB3,blaOXA-1,aac(6')-Ib-cr5,qnrB1,dfrA14,aadA1,catA1

characteristic: AMRFinderPlus AMR core genes

text: AMIKACIN/KANAMYCIN/QUINOLONE/TOBRAMYCIN,BLEOMYCIN,CARBAPENEM,CEPHALOSPORIN,CHLORAMPHENICOL,FOSFOMYCIN,MACROLIDE,PHENICOL/QUINOLONE,QUINOLONE,STREPTOMYCIN,TETRACYCLINE,TRIMETHOPRIM

characteristic: AMRFinderPlus AMR subclasses

characteristic: AMRFinderPlus DB version

text: Los Angeles County Public Health Lab microbial pathogen submission group

text: live

text: Microbe, viral or environmental

text: ecloacae

characteristic: PubMLST scheme

characteristic: collection date

text: USA: California, Los Angeles County

characteristic: geographic location

text: Homo sapiens

text: tracheal aspirate

characteristic: isolation source

text: Enterobacter hormaechei

text: whole organism

characteristic: sample type


text: ftsI_A515V,aph(3'')-Ib,aph(6)-Id,tet(B),gyrA_S81L,blaADC-73,blaOXA-66,parC_S84L,mph(E),msr(E),armA,ant(3'')-IIa,sul1,aph(3')-VIa,blaOXA-23

text: AMIKACIN/KANAMYCIN,CARBAPENEM,CEPHALOSPORIN,EFFLUX,FOSFOMYCIN,GENTAMICIN,MACROLIDE,QUINOLONE,SPECTINOMYCIN/STREPTOMYCIN,STREPTOMYCIN,SULFONAMIDE,TETRACYCLINE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

text: USA: California, Los Angeles County

text: Homo sapiens

characteristic: isolate

text: urine

text: Acinetobacter baumannii

characteristic: organism

text: whole organism

text: Microbe sample from Acinetobacter baumannii


text: blaADC-30,gyrA_S81L,aph(3'')-Ib,aph(6)-Id,tet(B),ant(3'')-IIa,parC_S84L,mph(E),msr(E),armA,sul1,aadA1,catB8,aac(6')-Ib',blaOXA-66,blaTEM-1,sul2,blaOXA-237,aph(3')-Ia

text: BETA-LACTAM,CARBAPENEM,CEPHALOSPORIN,CHLORAMPHENICOL,EFFLUX,FOSFOMYCIN,GENTAMICIN,KANAMYCIN,MACROLIDE,QUINOLONE,SPECTINOMYCIN/STREPTOMYCIN,STREPTOMYCIN,SULFONAMIDE,TETRACYCLINE

text: live

characteristic: INSDC status

characteristic: MLST

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: USA: California, Los Angeles County

text: Homo sapiens

characteristic: host

text: wound

text: Acinetobacter baumannii

text: whole organism

characteristic: title


text: blaOXA-395,parC_S87L,crpP,blaPDC-3,aph(3')-IIb,catB7,gyrA_T83I,blaVIM-2,aac(6')-29a,fosA,sul1

characteristic: AMRFinderPlus AMR core genes

text: AMINOGLYCOSIDE,BETA-LACTAM,CARBAPENEM,CEPHALOSPORIN,CHLORAMPHENICOL,EFFLUX,FLUOROQUINOLONE,FOSFOMYCIN,KANAMYCIN,QUINOLONE,SULFONAMIDE

characteristic: AMRFinderPlus AMR subclasses

characteristic: AMRFinderPlus DB version

text: live

text: Microbe, viral or environmental

text: paeruginosa

characteristic: PubMLST scheme

characteristic: collection date

text: USA: California, Los Angeles County

characteristic: geographic location

text: Homo sapiens

text: wound

text: Pseudomonas aeruginosa

text: whole organism

text: Microbe sample from Pseudomonas aeruginosa


text: sul1,dfrA16,blaTEM-1,blaKPC-3,tet(J),catA

text: BETA-LACTAM,CARBAPENEM,CHLORAMPHENICOL,SULFONAMIDE,TETRACYCLINE,TRIMETHOPRIM

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: No ST predicted

text: Microbe, viral or environmental

text: USA: California, Los Angeles County

text: Homo sapiens

text: bronchoalveolar lavage

characteristic: isolation source

text: Proteus mirabilis

text: whole organism

characteristic: sample type

text: Microbe sample from Proteus mirabilis


text: blaOXA-181,gyrA_D87N,gyrA_S83F,fosA,parC_E84K,blaSHV-11,mph(E),msr(E),armA,sul1,aadA2,dfrA12,blaTEM-1,blaCTX-M-15

text: BETA-LACTAM,CARBAPENEM,CEPHALOSPORIN,EFFLUX,FOSFOMYCIN,GENTAMICIN,MACROLIDE,QUINOLONE,STREPTOMYCIN,SULFONAMIDE,TRIMETHOPRIM

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

characteristic: MLST

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: klebsiella

text: USA: California, Los Angeles County

text: Homo sapiens

characteristic: isolate

text: bronchoalveolar lavage

text: Klebsiella pneumoniae

characteristic: organism

text: whole organism

text: Microbe sample from Klebsiella pneumoniae


text: gyrA_S83Y,blaSHV-28,fosA,erm(B),blaKPC-3,mph(A),qnrB1,sul1,aadA5,dfrA17,blaCTX-M-15,catB3,blaOXA-1,aac(6')-Ib-cr5,aac(6')-Ib,dfrA14

characteristic: AMRFinderPlus AMR core genes

text: AMIKACIN/KANAMYCIN/QUINOLONE/TOBRAMYCIN,AMIKACIN/KANAMYCIN/TOBRAMYCIN,BETA-LACTAM,CARBAPENEM,CEPHALOSPORIN,CHLORAMPHENICOL,EFFLUX,FOSFOMYCIN,MACROLIDE,QUINOLONE,STREPTOMYCIN,SULFONAMIDE,TRIMETHOPRIM

characteristic: AMRFinderPlus AMR subclasses

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: klebsiella

characteristic: SRA accession

text: USA: California, Los Angeles County

text: Homo sapiens

characteristic: host

text: sputum

text: Klebsiella pneumoniae

text: whole organism

characteristic: title


text: parC_S87L,aph(3')-IIb,blaPDC-35,blaOXA-488,fosA,catB7,gyrA_D87N,gyrA_T83I,aac(6'),blaVIM-2,sul1,aadA6

text: AMINOGLYCOSIDE,BETA-LACTAM,CARBAPENEM,CEPHALOSPORIN,CHLORAMPHENICOL,EFFLUX,FOSFOMYCIN,KANAMYCIN,QUINOLONE,STREPTOMYCIN,SULFONAMIDE

characteristic: AMRFinderPlus DB version

characteristic: External Id

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: paeruginosa

characteristic: PubMLST scheme

characteristic: collection date

text: USA: California, Los Angeles County

characteristic: geographic location

text: Homo sapiens

text: urine

text: Pseudomonas aeruginosa

text: whole organism


text: blaOXA-66,blaADC-223,ant(3'')-IIa,gyrA_S81L,parC_S84L,mph(E),msr(E),armA,sul1,aadA1,catB8,aac(6')-Ib',aph(3')-Ia,blaOXA-23,aph(3')-VIa

text: AMIKACIN/KANAMYCIN,CARBAPENEM,CEPHALOSPORIN,CHLORAMPHENICOL,EFFLUX,FOSFOMYCIN,GENTAMICIN,KANAMYCIN,MACROLIDE,QUINOLONE,SPECTINOMYCIN/STREPTOMYCIN,STREPTOMYCIN,SULFONAMIDE

text: Los Angeles County Public Health Lab microbial pathogen submission group

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: USA: California, Los Angeles County

text: Homo sapiens

text: sputum

characteristic: isolation source

text: Acinetobacter baumannii

text: whole organism

characteristic: sample type


text: blaACT-17,fosA,blaKPC-2,blaTEM,aac(6')-Ib',aadA1,blaOXA-9

characteristic: AMRFinderPlus AMR core genes

text: BETA-LACTAM,CARBAPENEM,CEPHALOSPORIN,FOSFOMYCIN,GENTAMICIN,STREPTOMYCIN

characteristic: AMRFinderPlus AMR subclasses

text: live

characteristic: MLST

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: ecloacae

text: USA: California, Los Angeles County

text: Homo sapiens

characteristic: isolate

text: urine

text: Enterobacter hormaechei

characteristic: organism

text: whole organism

text: Microbe sample from Enterobacter hormaechei


text: ftsI_A515V,aph(3'')-Ib,aph(6)-Id,tet(B),ant(3'')-IIa,blaADC-223,parC_S84L,blaOXA-66,gyrA_S81L,mph(E),msr(E),armA,blaOXA-23

text: CARBAPENEM,CEPHALOSPORIN,EFFLUX,FOSFOMYCIN,GENTAMICIN,MACROLIDE,QUINOLONE,SPECTINOMYCIN/STREPTOMYCIN,STREPTOMYCIN,TETRACYCLINE

characteristic: AMRFinderPlus DB version

characteristic: External Id

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

characteristic: SRA accession

text: USA: California, Los Angeles County

text: Homo sapiens

characteristic: host

text: tracheal aspirate

text: Acinetobacter baumannii

text: whole organism

text: Microbe sample from Acinetobacter baumannii

characteristic: title


text: glpT_E448K,parC_S80I,parE_S458A,pmrB_Y358N,ftsI_I336IKYRI,gyrA_D87N,gyrA_S83L,blaKPC-3,tet(A),blaCTX-M-15,mph(A),aac(3)-IIe,catB3,blaOXA-1,aac(6')-Ib-cr5

text: AMIKACIN/KANAMYCIN/QUINOLONE/TOBRAMYCIN,AZTREONAM,BETA-LACTAM,CARBAPENEM,CEPHALOSPORIN,CHLORAMPHENICOL,COLISTIN,EFFLUX,FOSFOMYCIN,GENTAMICIN,MACROLIDE,QUINOLONE,TETRACYCLINE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

characteristic: PubMLST scheme

characteristic: collection date

text: USA: California, Los Angeles County

characteristic: geographic location

text: Homo sapiens

text: gastrostomy tube drainage

text: Escherichia coli

text: whole organism

text: Microbe sample from Escherichia coli


text: fosA,gyrA_Q106L,catB7,crpP,blaOXA-904,blaPDC-3,aph(3')-IIb

characteristic: AMRFinderPlus AMR core genes

text: BETA-LACTAM,CEPHALOSPORIN,CHLORAMPHENICOL,EFFLUX,FLUOROQUINOLONE,FOSFOMYCIN,KANAMYCIN,QUINOLONE

characteristic: AMRFinderPlus AMR subclasses

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: No ST predicted

text: Microbe, viral or environmental

text: paeruginosa

text: USA: California, Los Angeles County

text: Homo sapiens

text: sputum

characteristic: isolation source

text: Pseudomonas aeruginosa

text: whole organism

characteristic: sample type

text: Microbe sample from Pseudomonas aeruginosa


text: gyrA_S83Y,fosA,blaSHV-28,blaKPC-3,dfrA14,qnrB1,blaCTX-M-15,aac(3)-IIe,catB3,blaOXA-1,aac(6')-Ib-cr5,aac(6')-Ib

text: AMIKACIN/KANAMYCIN/QUINOLONE/TOBRAMYCIN,AMIKACIN/KANAMYCIN/TOBRAMYCIN,BETA-LACTAM,CARBAPENEM,CEPHALOSPORIN,CHLORAMPHENICOL,EFFLUX,FOSFOMYCIN,GENTAMICIN,QUINOLONE,TRIMETHOPRIM

characteristic: AMRFinderPlus DB version

characteristic: External Id

text: live

characteristic: MLST

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: klebsiella

text: USA: California, Los Angeles County

text: Homo sapiens

characteristic: isolate

text: urine

text: Klebsiella pneumoniae

characteristic: organism

text: whole organism

text: Microbe sample from Klebsiella pneumoniae


text: fosA,gyrA_S83I,blaSHV-205,parC_S80I,oqxB19,oqxA,aac(6')-Ib,blaKPC-3,qnrS1,aph(6)-Id,aph(3'')-Ib,sul2,qnrB1

text: AMIKACIN/KANAMYCIN/TOBRAMYCIN,BETA-LACTAM,CARBAPENEM,EFFLUX,FOSFOMYCIN,PHENICOL/QUINOLONE,QUINOLONE,STREPTOMYCIN,SULFONAMIDE

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: klebsiella

characteristic: SRA accession

text: USA: California, Los Angeles County

text: Homo sapiens

characteristic: host

text: sputum

text: Klebsiella pneumoniae

text: whole organism

characteristic: title


text: gyrA_S81L,parC_S84L,ant(3'')-IIa,mph(E),msr(E),armA,sul1,aadA1,catB8,aac(6')-Ib',aph(3')-Ia,blaOXA-66,blaADC,blaOXA-23,aph(3')-VIa

characteristic: AMRFinderPlus AMR core genes

text: AMIKACIN/KANAMYCIN,CARBAPENEM,CEPHALOSPORIN,CHLORAMPHENICOL,EFFLUX,FOSFOMYCIN,GENTAMICIN,KANAMYCIN,MACROLIDE,QUINOLONE,SPECTINOMYCIN/STREPTOMYCIN,STREPTOMYCIN,SULFONAMIDE

characteristic: AMRFinderPlus AMR subclasses

text: Los Angeles County Public Health Lab microbial pathogen submission group

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

characteristic: PubMLST scheme

characteristic: collection date

text: USA: California, Los Angeles County

characteristic: geographic location

text: Homo sapiens

text: urine

text: Acinetobacter baumannii

text: whole organism


text: gyrA_S81L,ant(3'')-IIa,parC_S84L,mph(E),msr(E),armA,sul1,aadA1,catB8,aac(6')-Ib',aph(3')-Ia,blaOXA-66,blaOXA-23,aph(3')-VIa,blaADC

characteristic: AMRFinderPlus DB version

characteristic: External Id

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: USA: California, Los Angeles County

text: Homo sapiens

text: urine

characteristic: isolation source

text: Acinetobacter baumannii

text: whole organism

characteristic: sample type


text: ftsI_A515V,aph(3'')-Ib,aph(6)-Id,tet(B),gyrA_S81L,blaADC-73,ant(3'')-IIa,parC_S84L,mph(E),msr(E),armA,blaOXA-66,aph(3')-Ia,blaOXA-23,blaTEM-1

text: BETA-LACTAM,CARBAPENEM,CEPHALOSPORIN,EFFLUX,FOSFOMYCIN,GENTAMICIN,KANAMYCIN,MACROLIDE,QUINOLONE,SPECTINOMYCIN/STREPTOMYCIN,STREPTOMYCIN,TETRACYCLINE

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: MLST

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: USA: California, Los Angeles County

text: Homo sapiens

characteristic: isolate

text: sputum

text: Acinetobacter baumannii

characteristic: organism

text: whole organism


text: blaADC-26,blaOXA-104,ant(3'')-IIa,aph(3')-VIa,blaOXA-23

characteristic: AMRFinderPlus AMR core genes

text: AMIKACIN/KANAMYCIN,CARBAPENEM,CEPHALOSPORIN,EFFLUX,FOSFOMYCIN,SPECTINOMYCIN/STREPTOMYCIN

characteristic: AMRFinderPlus AMR subclasses

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

characteristic: SRA accession

text: USA: California, Los Angeles County

text: Homo sapiens

characteristic: host

text: sputum

text: Acinetobacter baumannii

text: whole organism

text: Microbe sample from Acinetobacter baumannii

characteristic: title


text: oqxA,oqxB,blaACT,fosA,blaCTX-M-15,blaTEM-1,aph(6)-Id,aph(3'')-Ib,sul2,ble,blaNDM-5,blaSHV-12,tet(A),mph(A),aac(3)-IIe,catB3,blaOXA-1,aac(6')-Ib-cr5,qnrB1,dfrA14,aadA1,catA1

text: AMIKACIN/KANAMYCIN/QUINOLONE/TOBRAMYCIN,BETA-LACTAM,BLEOMYCIN,CARBAPENEM,CEPHALOSPORIN,CHLORAMPHENICOL,FOSFOMYCIN,GENTAMICIN,MACROLIDE,PHENICOL/QUINOLONE,QUINOLONE,STREPTOMYCIN,SULFONAMIDE,TETRACYCLINE,TRIMETHOPRIM

characteristic: AMRFinderPlus DB version

characteristic: External Id

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: ecloacae

characteristic: PubMLST scheme

characteristic: collection date

text: USA: California, Los Angeles County

characteristic: geographic location

text: Homo sapiens

text: urine

text: Enterobacter hormaechei

text: whole organism

text: Microbe sample from Enterobacter hormaechei


text: gyrA_S83Y,blaSHV-28,fosA,blaKPC-3,dfrA14,qnrB1,blaCTX-M-15,catB3,blaOXA-1,aac(6')-Ib-cr5,aac(6')-Ib

text: AMIKACIN/KANAMYCIN/QUINOLONE/TOBRAMYCIN,AMIKACIN/KANAMYCIN/TOBRAMYCIN,BETA-LACTAM,CARBAPENEM,CEPHALOSPORIN,CHLORAMPHENICOL,EFFLUX,FOSFOMYCIN,QUINOLONE,TRIMETHOPRIM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: klebsiella

text: USA: California, Los Angeles County

text: Homo sapiens

text: tracheal aspirate

characteristic: isolation source

text: Klebsiella pneumoniae

text: whole organism

characteristic: sample type


text: ant(3'')-IIa,blaOXA-66,blaADC-223,gyrA_S81L,parC_S84L,mph(E),msr(E),armA,sul1,aadA1,catB8,aac(6')-Ib',blaOXA-23,aph(3')-Ia

characteristic: AMRFinderPlus AMR core genes

text: CARBAPENEM,CEPHALOSPORIN,CHLORAMPHENICOL,EFFLUX,FOSFOMYCIN,GENTAMICIN,KANAMYCIN,MACROLIDE,QUINOLONE,SPECTINOMYCIN/STREPTOMYCIN,STREPTOMYCIN,SULFONAMIDE

characteristic: AMRFinderPlus AMR subclasses

text: live

characteristic: MLST

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: USA: California, Los Angeles County

text: Homo sapiens

characteristic: isolate

text: wound

text: Acinetobacter baumannii

characteristic: organism

text: whole organism


text: gyrA_S83I,oqxA,oqxB,fosA,parC_S80I,pmrB_R256G,aadA2,sul3,aac(3)-IVa,aph(4)-Ia,blaKPC-3,aac(6')-Ib

text: AMIKACIN/KANAMYCIN/TOBRAMYCIN,APRAMYCIN/GENTAMICIN/TOBRAMYCIN,CARBAPENEM,COLISTIN,EFFLUX,FOSFOMYCIN,HYGROMYCIN,PHENICOL/QUINOLONE,QUINOLONE,STREPTOMYCIN,SULFONAMIDE

characteristic: AMRFinderPlus DB version

characteristic: External Id

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: klebsiella

characteristic: SRA accession

text: USA: California, Los Angeles County

text: Homo sapiens

characteristic: host

text: urine

text: Klebsiella pneumoniae

text: whole organism

text: Microbe sample from Klebsiella pneumoniae

characteristic: title


text: gyrA_S81L,ant(3'')-IIa,parC_S84L,blaADC-223,mph(E),msr(E),armA,sul1,aadA1,catB8,aac(6')-Ib',aph(3')-Ia,blaOXA-66,blaOXA-23,aph(3')-VIa

text: AMIKACIN/KANAMYCIN,CARBAPENEM,CEPHALOSPORIN,CHLORAMPHENICOL,EFFLUX,FOSFOMYCIN,GENTAMICIN,KANAMYCIN,MACROLIDE,QUINOLONE,SPECTINOMYCIN/STREPTOMYCIN,STREPTOMYCIN,SULFONAMIDE

text: Los Angeles County Public Health Lab microbial pathogen submission group

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

characteristic: PubMLST scheme

characteristic: collection date

text: USA: California, Los Angeles County

characteristic: geographic location

text: Homo sapiens

text: sputum

text: Acinetobacter baumannii

text: whole organism


text: ant(3'')-IIa,gyrA_S81L,blaADC-223,parC_S84L,mph(E),msr(E),armA,sul1,aadA1,catB8,aac(6')-Ib',aph(3')-Ia,blaOXA-66,blaOXA-23,aph(3')-VIa

characteristic: AMRFinderPlus AMR core genes

characteristic: AMRFinderPlus AMR subclasses

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: USA: California, Los Angeles County

text: Homo sapiens

text: bronchoalveolar lavage

characteristic: isolation source

text: Acinetobacter baumannii

text: whole organism

characteristic: sample type


text: oqxA,oqxB,gyrA_S83I,pmrB_R256G,parC_S80I,fosA,blaSHV-11,blaKPC-3,sul1,aadA2,dfrA12,aph(6)-Id,aph(3'')-Ib,sul2,mph(A),aadA1,blaOXA-9,blaTEM

text: BETA-LACTAM,CARBAPENEM,COLISTIN,EFFLUX,FOSFOMYCIN,MACROLIDE,PHENICOL/QUINOLONE,QUINOLONE,STREPTOMYCIN,SULFONAMIDE,TRIMETHOPRIM

characteristic: AMRFinderPlus DB version

characteristic: External Id

text: live

characteristic: MLST

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: klebsiella

text: USA: California, Los Angeles County

text: Homo sapiens

characteristic: isolate

text: rectal swab

text: Klebsiella pneumoniae

characteristic: organism

text: whole organism


text: gyrA_S81L,blaADC-223,ant(3'')-IIa,parC_S84L,mph(E),msr(E),armA,sul1,aadA1,catB8,aac(6')-Ib',aph(3')-Ia,blaOXA-66,blaOXA-23,aph(3')-VIa

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

characteristic: SRA accession

text: USA: California, Los Angeles County

text: Homo sapiens

characteristic: host

text: urine

text: Acinetobacter baumannii

text: whole organism

text: Microbe sample from Acinetobacter baumannii

characteristic: title


text: gyrA_S83I,oqxA,oqxB,fosA,pmrB_R256G,parC_S80I,blaKPC-3,sul1,aadA2,dfrA12,aph(6)-Id,aph(3'')-Ib,sul2,mph(A),blaSHV-12,aadA1,blaOXA-9,catA1,dfrA14,blaTEM

characteristic: AMRFinderPlus AMR core genes

text: BETA-LACTAM,CARBAPENEM,CEPHALOSPORIN,CHLORAMPHENICOL,COLISTIN,EFFLUX,FOSFOMYCIN,MACROLIDE,PHENICOL/QUINOLONE,QUINOLONE,STREPTOMYCIN,SULFONAMIDE,TRIMETHOPRIM

characteristic: AMRFinderPlus AMR subclasses

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: klebsiella

characteristic: PubMLST scheme

characteristic: collection date

text: USA: California, Los Angeles County

characteristic: geographic location

text: Homo sapiens

text: urine

text: Klebsiella pneumoniae

text: whole organism


text: oqxA,oqxB,gyrA_S83I,fosA,parC_S80I,pmrB_R256G,qnrS1,blaKPC-3,blaTEM,aph(6)-Id,aph(3'')-Ib,sul2,dfrA14,blaSHV-12,blaSHV,aadA1,blaOXA-9

text: BETA-LACTAM,CARBAPENEM,CEPHALOSPORIN,COLISTIN,EFFLUX,FOSFOMYCIN,PHENICOL/QUINOLONE,QUINOLONE,STREPTOMYCIN,SULFONAMIDE,TRIMETHOPRIM

characteristic: AMRFinderPlus DB version

characteristic: External Id

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: klebsiella

text: USA: California, Los Angeles County

text: Homo sapiens

text: urine

characteristic: isolation source

text: Klebsiella pneumoniae

text: whole organism

characteristic: sample type