text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

text: Bladder

text: DS-CA-PUB-MDS

text: Bladder Cancer

text: Yes

characteristic: is tumor

text: Homo sapiens

characteristic: organism

text: female

characteristic: sex

text: Case Set

text: Tumor DNA sample from Bladder of a human female participant in the dbGaP study "Exome Recapture and Sequencing of Prospectively Characterized Clinical Specimens From Cancer Patients"


status: PUBLIC

characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: DNA

tag: attribute

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Blood

characteristic: body site

text: DS-CA-PUB-MDS

text: Not applicable

characteristic: histological type

text: No

text: Homo sapiens

text: female

text: Case Set

characteristic: study design

characteristic: study name

characteristic: submitted sample id

text: C-UYXEKA

characteristic: submitted subject id

characteristic: submitter handle

text: Non-tumor DNA sample from Blood of a human female participant in the dbGaP study "Exome Recapture and Sequencing of Prospectively Characterized Clinical Specimens From Cancer Patients"

characteristic: title


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

text: Blood

text: DS-CA-PUB-MDS

text: Not applicable

text: No

characteristic: is tumor

text: Homo sapiens

characteristic: organism

text: male

characteristic: sex

text: Case Set

text: Non-tumor DNA sample from Blood of a human male participant in the dbGaP study "Exome Recapture and Sequencing of Prospectively Characterized Clinical Specimens From Cancer Patients"


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

text: Blood

text: DS-CA-PUB-MDS

text: Not applicable

text: No

text: Homo sapiens

text: female

text: Case Set

text: Exome Recapture and Sequencing of Prospectively Characterized Clinical Specimens From Cancer Patients


text: dbGaP

text: live

text: Generic

text: DNA

characteristic: biospecimen repository sample id

text: Breast

characteristic: body site

text: DS-CA-PUB-MDS

text: Breast Cancer

characteristic: histological type

text: Yes

text: Homo sapiens

text: female

text: Case Set

characteristic: study design

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

text: Tumor DNA sample from Breast of a human female participant in the dbGaP study "Exome Recapture and Sequencing of Prospectively Characterized Clinical Specimens From Cancer Patients"


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

text: Brain

text: DS-CA-PUB-MDS

text: Glioma

text: Yes

characteristic: is tumor

text: Homo sapiens

text: male

text: Case Set

characteristic: submitter handle

text: Tumor DNA sample from Brain of a human male participant in the dbGaP study "Exome Recapture and Sequencing of Prospectively Characterized Clinical Specimens From Cancer Patients"

characteristic: title


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: DNA

text: Lung

text: DS-CA-PUB-MDS

text: Small Cell Lung Cancer

text: Yes

text: Homo sapiens

characteristic: organism

text: male

characteristic: sex

text: Case Set

text: Tumor DNA sample from Lung of a human male participant in the dbGaP study "Exome Recapture and Sequencing of Prospectively Characterized Clinical Specimens From Cancer Patients"


text: dbGaP

text: live

text: Generic

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Mediastinum

characteristic: body site

text: DS-CA-PUB-MDS

text: Germ Cell Tumor

characteristic: histological type

text: Yes

text: Homo sapiens

text: male

text: Case Set

characteristic: study design

characteristic: study name

text: Tumor DNA sample from Mediastinum of a human male participant in the dbGaP study "Exome Recapture and Sequencing of Prospectively Characterized Clinical Specimens From Cancer Patients"


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

text: Blood

text: DS-CA-PUB-MDS

text: Not applicable

text: No

characteristic: is tumor

text: Homo sapiens

text: male

text: Case Set

characteristic: submitted sample id

characteristic: submitted subject id


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: DNA

text: Lung

text: DS-CA-PUB-MDS

text: Small Cell Lung Cancer

text: Yes

text: Homo sapiens

text: female

text: Case Set

characteristic: submitter handle

text: Tumor DNA sample from Lung of a human female participant in the dbGaP study "Exome Recapture and Sequencing of Prospectively Characterized Clinical Specimens From Cancer Patients"

characteristic: title


text: dbGaP

text: live

text: Generic

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Bladder

characteristic: body site

text: DS-CA-PUB-MDS

text: Bladder Cancer

characteristic: histological type

text: Yes

text: Homo sapiens

characteristic: organism

text: male

characteristic: sex

text: Case Set

text: Tumor DNA sample from Bladder of a human male participant in the dbGaP study "Exome Recapture and Sequencing of Prospectively Characterized Clinical Specimens From Cancer Patients"


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

text: Unknown

text: DS-CA-PUB-MDS

text: Head and Neck Cancer

text: Yes

characteristic: is tumor

text: Homo sapiens

text: female

text: Case Set

characteristic: study design

characteristic: study name

text: Tumor DNA sample from Unknown of a human female participant in the dbGaP study "Exome Recapture and Sequencing of Prospectively Characterized Clinical Specimens From Cancer Patients"


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: DNA

text: Oropharynx

text: DS-CA-PUB-MDS

text: Head and Neck Cancer

text: Yes

text: Homo sapiens

text: female

text: Case Set

characteristic: submitted sample id

characteristic: submitted subject id

text: Tumor DNA sample from Oropharynx of a human female participant in the dbGaP study "Exome Recapture and Sequencing of Prospectively Characterized Clinical Specimens From Cancer Patients"


text: dbGaP

text: live

text: Generic

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Kidney

characteristic: body site

text: DS-CA-PUB-MDS

text: Renal Cell Carcinoma

characteristic: histological type

text: Yes

text: Homo sapiens

text: male

text: Case Set

characteristic: submitter handle

text: Tumor DNA sample from Kidney of a human male participant in the dbGaP study "Exome Recapture and Sequencing of Prospectively Characterized Clinical Specimens From Cancer Patients"

characteristic: title


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

text: Blood

text: DS-CA-PUB-MDS

text: Not applicable

text: No

characteristic: is tumor

text: Homo sapiens

characteristic: organism

text: female

characteristic: sex

text: Case Set

text: C-PCJWEX


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: DNA

text: Neck

text: DS-CA-PUB-MDS

text: Head and Neck Cancer

text: Yes

text: Homo sapiens

text: male

text: Case Set

characteristic: study design

characteristic: study name

text: Tumor DNA sample from Neck of a human male participant in the dbGaP study "Exome Recapture and Sequencing of Prospectively Characterized Clinical Specimens From Cancer Patients"


text: dbGaP

text: live

text: Generic

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Uterus

characteristic: body site

text: DS-CA-PUB-MDS

text: Uterine Sarcoma

characteristic: histological type

text: Yes

text: Homo sapiens

text: female

text: Case Set

characteristic: submitted sample id

characteristic: submitted subject id

text: Tumor DNA sample from Uterus of a human female participant in the dbGaP study "Exome Recapture and Sequencing of Prospectively Characterized Clinical Specimens From Cancer Patients"


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

text: Gallbladder

text: DS-CA-PUB-MDS

text: Hepatobiliary Cancer

text: Yes

characteristic: is tumor

text: Homo sapiens

text: male

text: Case Set

characteristic: submitter handle

text: Tumor DNA sample from Gallbladder of a human male participant in the dbGaP study "Exome Recapture and Sequencing of Prospectively Characterized Clinical Specimens From Cancer Patients"

characteristic: title


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: DNA

text: Kidney

text: DS-CA-PUB-MDS

text: Renal Cell Carcinoma

text: Yes

text: Homo sapiens

characteristic: organism

text: female

characteristic: sex

text: Case Set

text: Tumor DNA sample from Kidney of a human female participant in the dbGaP study "Exome Recapture and Sequencing of Prospectively Characterized Clinical Specimens From Cancer Patients"


text: dbGaP

text: live

text: Generic

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Uterus

characteristic: body site

text: DS-CA-PUB-MDS

text: Endometrial Cancer

characteristic: histological type

text: Yes

text: Homo sapiens

text: female

text: Case Set

characteristic: study design

characteristic: study name


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

text: Lung

text: DS-CA-PUB-MDS

text: Non-Small Cell Lung Cancer

text: Yes

characteristic: is tumor

text: Homo sapiens

text: female

text: Case Set

characteristic: submitted sample id

characteristic: submitted subject id


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: DNA

text: Blood

text: DS-CA-PUB-MDS

text: Not applicable

text: No

text: Homo sapiens

text: female

text: Case Set

characteristic: submitter handle

characteristic: title


text: dbGaP

text: live

text: Generic

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Parotid Gland

characteristic: body site

text: DS-CA-PUB-MDS

text: Salivary Gland Cancer

characteristic: histological type

text: Yes

text: Homo sapiens

characteristic: organism

text: female

characteristic: sex

text: Case Set

text: Tumor DNA sample from Parotid Gland of a human female participant in the dbGaP study "Exome Recapture and Sequencing of Prospectively Characterized Clinical Specimens From Cancer Patients"


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

text: Breast

text: DS-CA-PUB-MDS

text: Breast Cancer

text: Yes

characteristic: is tumor

text: Homo sapiens

text: female

text: Case Set

characteristic: study design

characteristic: study name


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: DNA

text: Lung

text: DS-CA-PUB-MDS

text: Non-Small Cell Lung Cancer

text: Yes

text: Homo sapiens

text: male

text: Case Set

characteristic: submitted sample id

text: C-KRDHAX

characteristic: submitted subject id


text: dbGaP

text: live

text: Generic

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Blood

characteristic: body site

text: DS-CA-PUB-MDS

text: Not applicable

characteristic: histological type

text: No

text: Homo sapiens

text: male

text: Case Set

characteristic: submitter handle

characteristic: title


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

text: Lung

text: DS-CA-PUB-MDS

text: Small Cell Lung Cancer

text: Yes

characteristic: is tumor

text: Homo sapiens

characteristic: organism

text: female

characteristic: sex

text: Case Set


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: DNA

text: Pancreas

text: DS-CA-PUB-MDS

text: Pancreatic Cancer

text: Yes

text: Homo sapiens

text: male

text: Case Set

characteristic: study design

characteristic: study name

text: Tumor DNA sample from Pancreas of a human male participant in the dbGaP study "Exome Recapture and Sequencing of Prospectively Characterized Clinical Specimens From Cancer Patients"


text: dbGaP

text: live

text: Generic

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Lung

characteristic: body site

text: DS-CA-PUB-MDS

text: Small Cell Lung Cancer

characteristic: histological type

text: Yes

text: Homo sapiens

text: male

text: Case Set

characteristic: submitted sample id

characteristic: submitted subject id


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

text: Upper Tract

text: DS-CA-PUB-MDS

text: Bladder Cancer

text: Yes

characteristic: is tumor

text: Homo sapiens

text: female

text: Case Set

characteristic: submitter handle

text: Tumor DNA sample from Upper Tract of a human female participant in the dbGaP study "Exome Recapture and Sequencing of Prospectively Characterized Clinical Specimens From Cancer Patients"

characteristic: title


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: DNA

text: Bladder

text: DS-CA-PUB-MDS

text: Bladder Cancer

text: Yes

text: Homo sapiens

characteristic: organism

text: male

characteristic: sex

text: Case Set

text: Exome Recapture and Sequencing of Prospectively Characterized Clinical Specimens From Cancer Patients


text: dbGaP

text: live

text: Generic

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Oropharynx

characteristic: body site

text: DS-CA-PUB-MDS

text: Head and Neck Cancer

characteristic: histological type

text: Yes

text: Homo sapiens

text: male

text: Case Set

characteristic: study design

characteristic: study name

text: Tumor DNA sample from Oropharynx of a human male participant in the dbGaP study "Exome Recapture and Sequencing of Prospectively Characterized Clinical Specimens From Cancer Patients"


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

text: Ovary

text: DS-CA-PUB-MDS

text: Ovarian Cancer

text: Yes

characteristic: is tumor

text: Homo sapiens

text: female

text: Case Set

characteristic: submitted sample id

characteristic: submitted subject id

text: Tumor DNA sample from Ovary of a human female participant in the dbGaP study "Exome Recapture and Sequencing of Prospectively Characterized Clinical Specimens From Cancer Patients"


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: DNA

text: Prostate

text: DS-CA-PUB-MDS

text: Prostate Cancer

text: Yes

text: Homo sapiens

text: male

text: Case Set

characteristic: submitter handle

text: Tumor DNA sample from Prostate of a human male participant in the dbGaP study "Exome Recapture and Sequencing of Prospectively Characterized Clinical Specimens From Cancer Patients"

characteristic: title


text: dbGaP

text: live

text: Generic

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Brain

characteristic: body site

text: DS-CA-PUB-MDS

text: Glioma

characteristic: histological type

text: Yes

text: Homo sapiens

characteristic: organism

text: male

characteristic: sex

text: Case Set

text: Tumor DNA sample from Brain of a human male participant in the dbGaP study "Exome Recapture and Sequencing of Prospectively Characterized Clinical Specimens From Cancer Patients"


text: University of Minnesota

text: live

characteristic: INSDC status

text: Human

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: affected protein

characteristic: age

text: ATCC

text: Lymphoblast

text: missing

text: adult

text: chronic myeloid leukemia, DOID:8552

characteristic: disease

text: caucasian

characteristic: ethnicity

text: missing

characteristic: isolate

text: Homo sapiens

characteristic: replicate

text: cell culture

text: female

text: immortalized cell line

characteristic: tissue

text: U2AF1 sample, wild-type, biological_replicate 1

text: WT

characteristic: treatment


characteristic: External Id

text: University of Minnesota

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Human

text: ATCC

text: Lymphoblast

text: missing

text: adult

text: chronic myeloid leukemia, DOID:8552

text: caucasian

text: missing

text: Homo sapiens

text: cell culture

text: female

text: immortalized cell line

text: U2AF1 sample, wild-type, biological_replicate 2

characteristic: title

text: WT


text: University of Minnesota

text: live

characteristic: INSDC status

text: Human

characteristic: NCBI submission model

text: ATCC

text: Lymphoblast

text: missing

text: adult

text: chronic myeloid leukemia, DOID:8552

text: caucasian

text: missing

text: Homo sapiens

characteristic: organism

text: cell culture

text: female

characteristic: sex

text: immortalized cell line

text: U2AF1 sample, wild-type, biological_replicate 3

text: WT


text: University of Minnesota

text: live

text: Human

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: affected protein

characteristic: age

text: ATCC

text: Lymphoblast

text: missing

text: adult

text: chronic myeloid leukemia, DOID:8552

text: caucasian

text: missing

text: Homo sapiens

text: cell culture

text: female

text: immortalized cell line

text: U2AF1 sample, S34F mutant, biological_replicate 1


text: University of Minnesota

text: live

text: Human

text: ATCC

text: Lymphoblast

text: missing

text: adult

text: chronic myeloid leukemia, DOID:8552

characteristic: disease

text: caucasian

characteristic: ethnicity

text: missing

characteristic: isolate

text: Homo sapiens

characteristic: replicate

text: cell culture

text: female

text: immortalized cell line

text: U2AF1 sample, S34F mutant, biological_replicate 2


characteristic: External Id

text: University of Minnesota

characteristic: INSDC center name

text: live

text: Human

text: ATCC

text: Lymphoblast

text: missing

text: adult

text: chronic myeloid leukemia, DOID:8552

text: caucasian

text: missing

text: Homo sapiens

text: cell culture

text: female

text: immortalized cell line

characteristic: tissue

text: U2AF1 sample, S34F mutant, biological_replicate 3

characteristic: treatment


text: University of Minnesota

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Human

text: ATCC

text: Lymphoblast

text: missing

text: adult

text: chronic myeloid leukemia, DOID:8552

text: caucasian

text: missing

text: Homo sapiens

text: cell culture

text: female

text: immortalized cell line

text: SRSF2 sample, wild-type, biological_replicate 1

characteristic: title

text: WT


text: University of Minnesota

text: live

characteristic: INSDC status

text: Human

characteristic: NCBI submission model

text: ATCC

text: Lymphoblast

text: missing

text: adult

text: chronic myeloid leukemia, DOID:8552

text: caucasian

text: missing

text: Homo sapiens

characteristic: organism

text: cell culture

text: female

characteristic: sex

text: immortalized cell line

text: SRSF2 sample, wild-type, biological_replicate 2

text: WT


text: University of Minnesota

text: live

text: Human

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: affected protein

characteristic: age

text: ATCC

text: Lymphoblast

text: missing

text: adult

text: chronic myeloid leukemia, DOID:8552

text: caucasian

text: missing

text: Homo sapiens

text: cell culture

text: female

text: immortalized cell line

text: SRSF2 sample, wild-type, biological_replicate 3

text: WT


text: University of Minnesota

text: live

text: Human

text: ATCC

text: Lymphoblast

text: missing

text: adult

text: chronic myeloid leukemia, DOID:8552

characteristic: disease

text: caucasian

characteristic: ethnicity

text: missing

characteristic: isolate

text: Homo sapiens

characteristic: replicate

text: cell culture

text: female

text: immortalized cell line

text: SRSF2 sample, P95H mutant, biological_replicate 1


characteristic: External Id

text: University of Minnesota

characteristic: INSDC center name

text: live

text: Human

text: ATCC

text: Lymphoblast

text: missing

text: adult

text: chronic myeloid leukemia, DOID:8552

text: caucasian

text: missing

text: Homo sapiens

text: cell culture

text: female

text: immortalized cell line

characteristic: tissue

text: SRSF2 sample, P95H mutant, biological_replicate 2

characteristic: treatment


text: University of Minnesota

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Human

text: ATCC

text: Lymphoblast

text: missing

text: adult

text: chronic myeloid leukemia, DOID:8552

text: caucasian

text: missing

text: Homo sapiens

text: cell culture

text: female

text: immortalized cell line

text: SRSF2 sample, P95H mutant, biological_replicate 3

characteristic: title


characteristic: Aliquot

text: Chinese Academy of Forestry

text: live

characteristic: INSDC status

text: Plant

characteristic: NCBI submission model

text: six-month-old

text: Eucalyptus grandis

characteristic: cultivar

text: not collected

text: Eucalyptus grandis

characteristic: ecotype

text: China:Guangdong

text: RNA samples from stem IN3-4

text: Eucalyptus grandis

characteristic: organism

text: stem

text: Plant sample from Eucalyptus grandis


text: Chinese Academy of Forestry

text: live

text: Plant

characteristic: NCBI submission package

characteristic: SRA accession

text: six-month-old

characteristic: age

text: Eucalyptus grandis

text: not collected

text: Eucalyptus grandis

text: China:Guangdong

text: RNA samples from stem IN5-6

text: Eucalyptus grandis

text: stem

text: Plant sample from Eucalyptus grandis


characteristic: External Id

text: Chinese Academy of Forestry

text: live

text: Plant

text: six-month-old

text: Eucalyptus grandis

text: not collected

text: Eucalyptus grandis

text: China:Guangdong

text: RNA samples from stem IN7-8

characteristic: isolate

text: Eucalyptus grandis

text: stem

text: Plant sample from Eucalyptus grandis


text: Chinese Academy of Forestry

characteristic: INSDC center name

text: live

text: Plant

text: six-month-old

text: Eucalyptus grandis

text: not collected

text: Eucalyptus grandis

text: China:Guangdong

text: RNA samples from stem IN9-10

text: Eucalyptus grandis

text: stem

characteristic: tissue

text: Plant sample from Eucalyptus grandis


text: Chinese Academy of Forestry

characteristic: INSDC first public

text: live

text: Plant

text: six-month-old

text: Eucalyptus grandis

text: not collected

text: Eucalyptus grandis

text: China:Guangdong

text: RNA samples from stem IN11-12

text: Eucalyptus grandis

text: stem

text: Plant sample from Eucalyptus grandis


Granular community

text: Ghent University

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: Belgium: Ghent

text: Granular sludge from sugar chain-elongating reactor

text: 51.30 N 3.43 E

text: bioreactor metagenome

text: Metagenome or environmental sample from bioreactor metagenome


AML _004

text: Fred Hutchinson Cancer Center

characteristic: INSDC secondary accession

text: live

text: Human

text: FHCC-HDR

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

characteristic: description

text: not applicable

text: Acute myeloid leukemia

characteristic: disease

text: not applicable

text: not applicable

characteristic: ethnicity

text: USA: Seattle

text: not applicable

text: SL_AML _004

text: not applicable

characteristic: karyotype

text: Homo sapiens

text: not applicable

characteristic: phenotype

text: not applicable

characteristic: population

text: not applicable

characteristic: race

text: not applicable

text: male

characteristic: sex

text: Peripheral blood

text: Human sample from Homo sapiens

text: not applicable

characteristic: treatment


AML _008

text: Fred Hutchinson Cancer Center

text: live

characteristic: INSDC status

text: Human

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: age

text: FHCC-HDR

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: Acute myeloid leukemia

text: not applicable

text: not applicable

text: USA: Seattle

text: not applicable

text: SL_AML _008

text: not applicable

text: Homo sapiens

characteristic: organism

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: male

text: Peripheral blood

text: Human sample from Homo sapiens

characteristic: title

text: not applicable


AML _009

characteristic: External Id

text: Fred Hutchinson Cancer Center

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Human

text: FHCC-HDR

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: Acute myeloid leukemia

text: not applicable

text: not applicable

text: USA: Seattle

text: not applicable

text: SL_AML _009

characteristic: isolate

text: not applicable

text: Homo sapiens

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: male

text: Peripheral blood

characteristic: tissue

text: Human sample from Homo sapiens

text: not applicable


AML _013

text: Fred Hutchinson Cancer Center

text: live

text: Human

text: FHCC-HDR

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

characteristic: description

text: not applicable

text: Acute myeloid leukemia

characteristic: disease

text: not applicable

text: not applicable

characteristic: ethnicity

text: USA: Seattle

text: not applicable

text: SL_AML _013

text: not applicable

characteristic: karyotype

text: Homo sapiens

text: not applicable

characteristic: phenotype

text: not applicable

characteristic: population

text: not applicable

characteristic: race

text: not applicable

text: male

text: Peripheral blood

text: Human sample from Homo sapiens

text: not applicable


AML _015

text: Fred Hutchinson Cancer Center

text: live

characteristic: INSDC status

text: Human

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: age

text: FHCC-HDR

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: Acute myeloid leukemia

text: not applicable

text: not applicable

text: USA: Seattle

text: not applicable

text: SL_AML _015

text: not applicable

text: Homo sapiens

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: male

characteristic: sex

text: Bone marrow

text: Human sample from Homo sapiens

text: not applicable

characteristic: treatment


AML _016

characteristic: External Id

text: Fred Hutchinson Cancer Center

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Human

text: FHCC-HDR

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: Acute myeloid leukemia

text: not applicable

text: not applicable

text: USA: Seattle

text: not applicable

text: SL_AML _016

text: not applicable

text: Homo sapiens

characteristic: organism

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: male

text: Peripheral blood

text: Human sample from Homo sapiens

characteristic: title

text: not applicable


AML _018

text: Fred Hutchinson Cancer Center

text: live

text: Human

text: FHCC-HDR

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

characteristic: description

text: not applicable

text: Acute myeloid leukemia

characteristic: disease

text: not applicable

text: not applicable

characteristic: ethnicity

text: USA: Seattle

text: not applicable

text: SL_AML _018

characteristic: isolate

text: not applicable

characteristic: karyotype

text: Homo sapiens

text: not applicable

characteristic: phenotype

text: not applicable

text: not applicable

text: not applicable

text: male

text: Peripheral blood

characteristic: tissue

text: Human sample from Homo sapiens

text: not applicable


AML _002

text: Fred Hutchinson Cancer Center

text: live

characteristic: INSDC status

text: Human

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: age

text: FHCC-HDR

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: Acute myeloid leukemia

text: not applicable

text: not applicable

text: USA: Seattle

text: not applicable

text: SL_AML _002

text: not applicable

text: Homo sapiens

text: not applicable

text: not applicable

characteristic: population

text: not applicable

characteristic: race

text: not applicable

text: male

text: Peripheral blood

text: Human sample from Homo sapiens

text: not applicable


AML _003

characteristic: External Id

text: Fred Hutchinson Cancer Center

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Human

text: FHCC-HDR

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: Acute myeloid leukemia

text: not applicable

text: not applicable

text: USA: Seattle

text: not applicable

text: SL_AML _003

text: not applicable

text: Homo sapiens

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: male

characteristic: sex

text: Peripheral blood

text: Human sample from Homo sapiens

text: not applicable

characteristic: treatment


AML _006

text: Fred Hutchinson Cancer Center

text: live

text: Human

text: FHCC-HDR

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

characteristic: description

text: not applicable

text: Acute myeloid leukemia

characteristic: disease

text: not applicable

text: not applicable

characteristic: ethnicity

text: USA: Seattle

text: not applicable

text: SL_AML _006

characteristic: isolate

text: not applicable

characteristic: karyotype

text: Homo sapiens

characteristic: organism

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: male

text: Peripheral blood

text: Human sample from Homo sapiens

characteristic: title

text: not applicable


AML _001

text: Fred Hutchinson Cancer Center

text: live

characteristic: INSDC status

text: Human

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: age

text: FHCC-HDR

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: Acute myeloid leukemia

text: not applicable

text: not applicable

text: USA: Seattle

text: not applicable

text: SL_AML _001

text: not applicable

text: Homo sapiens

text: not applicable

characteristic: phenotype

text: not applicable

text: not applicable

text: not applicable

text: male

text: Peripheral blood

characteristic: tissue

text: Human sample from Homo sapiens

text: not applicable


AML _005

characteristic: External Id

text: Fred Hutchinson Cancer Center

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Human

text: FHCC-HDR

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: Acute myeloid leukemia

text: not applicable

text: not applicable

text: USA: Seattle

text: not applicable

text: SL_AML _005

text: not applicable

text: Homo sapiens

text: not applicable

text: not applicable

characteristic: population

text: not applicable

characteristic: race

text: not applicable

text: male

text: Peripheral blood

text: Human sample from Homo sapiens

text: not applicable


AML _014

text: Fred Hutchinson Cancer Center

text: live

text: Human

text: FHCC-HDR

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

characteristic: description

text: not applicable

text: Acute myeloid leukemia

characteristic: disease

text: not applicable

text: not applicable

characteristic: ethnicity

text: USA: Seattle

text: not applicable

text: SL_AML _014

characteristic: isolate

text: not applicable

characteristic: karyotype

text: Homo sapiens

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: male

characteristic: sex

text: Bone marrow

text: Human sample from Homo sapiens

text: not applicable

characteristic: treatment


AML _017

text: Fred Hutchinson Cancer Center

text: live

characteristic: INSDC status

text: Human

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: age

text: FHCC-HDR

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: Acute myeloid leukemia

text: not applicable

text: not applicable

text: USA: Seattle

text: not applicable

text: SL_AML _017

text: not applicable

text: Homo sapiens

characteristic: organism

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: male

text: Peripheral blood

text: Human sample from Homo sapiens

characteristic: title

text: not applicable


AML _020

characteristic: External Id

text: Fred Hutchinson Cancer Center

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Human

text: FHCC-HDR

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: Acute myeloid leukemia

text: not applicable

text: not applicable

text: USA: Seattle

text: not applicable

text: SL_AML _020

text: not applicable

text: Homo sapiens

text: not applicable

characteristic: phenotype

text: not applicable

text: not applicable

text: not applicable

text: male

text: Peripheral blood

characteristic: tissue

text: Human sample from Homo sapiens

text: not applicable


AML _010

text: Fred Hutchinson Cancer Center

text: live

text: Human

text: FHCC-HDR

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

characteristic: description

text: not applicable

text: Acute myeloid leukemia

characteristic: disease

text: not applicable

text: not applicable

characteristic: ethnicity

text: USA: Seattle

text: not applicable

text: SL_AML _010

characteristic: isolate

text: not applicable

characteristic: karyotype

text: Homo sapiens

text: not applicable

text: not applicable

characteristic: population

text: not applicable

characteristic: race

text: not applicable

text: male

text: Peripheral blood

text: Human sample from Homo sapiens

text: not applicable


AML _011

text: Fred Hutchinson Cancer Center

text: live

characteristic: INSDC status

text: Human

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: age

text: FHCC-HDR

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: Acute myeloid leukemia

text: not applicable

text: not applicable

text: USA: Seattle

text: not applicable

text: SL_AML _011

text: not applicable

text: Homo sapiens

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: male

characteristic: sex

text: Peripheral blood

text: Human sample from Homo sapiens

text: not applicable

characteristic: treatment


Genome in a Bottle (WT Control)

characteristic: External Id

text: Fred Hutchinson Cancer Center

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Human

text: NIGMS Human Genetic Cell Repository

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: USA

text: not applicable

text: B-Lymphocyte

text: not applicable

text: Homo sapiens

characteristic: organism

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: female

text: Peripheral blood

text: Human sample from Homo sapiens

characteristic: title

text: not applicable


text: Fred Hutch Cancer Center

text: live

text: Microbe, viral or environmental

text: Profiling escape from broadly flavivirus neutralizing antibodies. Bloom and Goo labs.

characteristic: description

text: USA: Washington

text: Vero

text: Zika virus

text: plasmid

characteristic: strain

text: Illumina barcoded subamplicon sequencing from mutational antigenic profiling of Zika virus:MR766


text: Vanderbilt University Medical Center

text: live

text: Human

text: 5 months - 17 years

text: The Vanderbilt Clinic, Vanderbilt University Medical Center, Nashville, TN 37232, USA

text: USA

text: VC71281, 20210624 and 20210818

characteristic: isolate

text: Homo sapiens

text: pooled male and female

text: PBMC

characteristic: tissue

text: Human sample from Homo sapiens


text: Vanderbilt University Medical Center

text: live

characteristic: INSDC status

text: Human

characteristic: NCBI submission model

text: 13 years - 18 years

text: USA

text: VC71282, 20210624 and 20210818

text: Homo sapiens

text: pooled male and female

text: PBMC

text: Human sample from Homo sapiens


text: Nathan Salomonis, Biomedical Informatics, Cincinnati Children's Hospital

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: brain primary cell line

characteristic: cell line

text: Neural Progenitor Cell

characteristic: cell type

text: missing

text: missing

text: Rattus norvegicus

text: brain

text: Sprague-Dawley

text: brain

text: 1Gy 200 uM Ascorbic Acid


characteristic: External Id

text: live

text: Generic

text: brain primary cell line

text: Neural Progenitor Cell

text: missing

text: missing

text: Rattus norvegicus

text: brain

text: Sprague-Dawley

text: brain

text: 1Gy 5uM Noggin

characteristic: treatment


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: brain primary cell line

text: Neural Progenitor Cell

text: missing

text: missing

text: Rattus norvegicus

text: brain

text: Sprague-Dawley

text: brain

text: 1Gy none


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: brain primary cell line

text: Neural Progenitor Cell

text: missing

text: missing

text: Rattus norvegicus

text: brain

text: Sprague-Dawley

text: brain

text: 0Gy 200 uM Ascorbic Acid


text: live

text: Generic

text: brain primary cell line

text: Neural Progenitor Cell

text: missing

text: missing

text: Rattus norvegicus

characteristic: organism

text: brain

text: Sprague-Dawley

text: brain

characteristic: title

text: 0Gy 5uM Noggin


text: live

text: Generic

text: brain primary cell line

text: Neural Progenitor Cell

text: missing

text: missing

text: Rattus norvegicus

text: brain

text: Sprague-Dawley

characteristic: strain

text: brain

text: 0Gy none


text: University of Miami Miller School of Medicine

text: live

text: Model organism or animal

text: 2 month

characteristic: age

text: USA

text: Mus musculus

text: male

characteristic: sex

text: retina

text: Model organism or animal sample from Mus musculus

text: NMDA-treated sample 1


text: live

characteristic: INSDC status

text: Model organism or animal

text: 2 month

text: USA

text: Mus musculus

text: male

text: retina

characteristic: tissue

text: NMDA-treated sample 2


text: live

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 2 month

text: USA

text: Mus musculus

text: female

text: retina

text: NMDA-treated sample 3


text: live

text: Model organism or animal

characteristic: SRA accession

text: 2 month

text: USA

text: Mus musculus

text: female

text: retina

text: NMDA-treated sample 4


text: live

text: Model organism or animal

text: 2 month

text: USA

text: Mus musculus

text: male

text: retina

text: PBS-treated sample 1


text: live

text: Model organism or animal

text: 2 month

text: USA

text: Mus musculus

text: male

text: retina

text: PBS-treated sample 2


text: live

text: Model organism or animal

text: 2 month

text: USA

text: Mus musculus

text: female

text: retina

text: PBS-treated sample 3


text: live

text: Model organism or animal

text: 2 month

text: USA

text: Mus musculus

text: female

text: retina

text: PBS-treated sample 4


text: Kyung Hee University

text: live

text: MIGS.eu

text: Larva

characteristic: Stage

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: multicellular organism

text: multicellular organism

text: cornmeal-agar medium

text: South Korea: Seoul

text: not applicable

text: not applicable

text: Drosophila melanogaster

text: RNA-seq of Drosophila melanogaster gut


characteristic: External Id

text: Kyung Hee University

text: live

text: MIGS.eu

text: Pupa

text: Keywords: GSC:MIxS;MIGS:6.0

text: multicellular organism

text: multicellular organism

text: cornmeal-agar medium

text: South Korea: Seoul

text: not applicable

text: not applicable

text: Drosophila melanogaster

text: RNA-seq of Drosophila melanogaster gut


text: Department of General Surgery, the First Affiliated Hospital of Xi’an Jiaotong University

characteristic: INSDC center name

text: live

text: Generic

characteristic: cell line

text: humancolon cancercell line

characteristic: cell type

text: missing

characteristic: genotype

text: missing

text: Homo sapiens

characteristic: treatment


characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: humancolon cancercell line

text: missing

text: NC

text: missing

text: Homo sapiens

characteristic: organism

characteristic: title

text: Vector


text: Institue for Life and Medical Sciences, Kyoto University

text: live

characteristic: INSDC status

text: Generic

text: Jurkat

text: T-ALL

text: missing

text: missing

text: Homo sapiens

text: Jurkat

text: 8 days

characteristic: time

text: 0.01% DMSO


text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Jurkat

text: T-ALL

text: missing

text: missing

text: Homo sapiens

text: Jurkat

text: 8 days

text: 1 uM BRM014


text: live

text: Generic

characteristic: SRA accession

text: Jurkat

text: T-ALL

characteristic: chip antibody

text: missing

text: missing

text: Homo sapiens

text: Jurkat

text: 7 days

text: gARID1A_1B transduction


characteristic: External Id

text: live

text: Generic

text: Jurkat

text: T-ALL

text: missing

text: missing

text: Homo sapiens

text: Jurkat

text: 7 days

text: ChIP-Input-Jurkat-gSMARCA4_A2_biol_rep_2

text: gSMARCA4_A2 transduction


characteristic: INSDC center name

text: live

text: Generic

text: Jurkat

text: T-ALL

text: missing

text: missing

text: Homo sapiens

text: Jurkat

text: 7 days

text: gAAVS1 transduction


text: live

text: Generic

text: Jurkat

characteristic: cell line

text: T-ALL

text: missing

text: missing

text: Homo sapiens

text: Jurkat

text: 7 days

text: ChIP-Input-Jurkat-gSMARCA4_A2_biol_rep_1

text: gSMARCA4_A2 transduction


text: live

text: Generic

text: Jurkat

text: T-ALL

characteristic: cell type

text: RUNX1/AML1 (abcam, ab23980)

text: missing

text: missing

text: Homo sapiens

text: Jurkat

text: 7 days

text: gARID1A_1B transduction


text: live

text: Generic

text: Jurkat

text: T-ALL

text: RUNX1/AML1 (abcam, ab23980)

text: missing

text: missing

text: Homo sapiens

text: Jurkat

text: 7 days

text: ChIP-RUNX1-Jurkat-gSMARCA4_A2_biol_rep_2

text: gSMARCA4_A2 transduction


text: live

text: Generic

text: Jurkat

text: T-ALL

text: RUNX1/AML1 (abcam, ab23980)

text: missing

text: missing

text: Homo sapiens

text: Jurkat

text: 7 days

text: gAAVS1 transduction


text: live

text: Generic

text: Jurkat

text: T-ALL

text: RUNX1/AML1 (abcam, ab23980)

text: missing

text: missing

text: Homo sapiens

text: Jurkat

text: 7 days

text: ChIP-RUNX1-Jurkat-gSMARCA4_A2_biol_rep_1

text: gSMARCA4_A2 transduction


characteristic: Biological Replicate#

text: Propionate

characteristic: Enrichment Culture Type

text: Swedish University of Agricultural Sciences

text: live

text: MIGS/MIMS/MIMARKS.miscellaneous

text: MIMARKS.survey

text: Propionate

characteristic: Substrate

text: 50 mM

characteristic: Substrate concentration

characteristic: ammonium

text: Difference in microbial composition between 50mM or 100mM syntrophic propionate degradation

characteristic: description

text: Enrichment cultures

text: Mesophilic ammonia tolerant VFA oxidizing enrichment cultures

text: basal medium

text: Sweden:Uppsala

text: 59.81598077 N 17.66131683 E

text: bioreactor metagenome

characteristic: temp


text: Propionate

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.miscellaneous

text: MIMARKS.survey

text: Propionate

text: 100 mM

text: Enrichment cultures

text: basal medium

text: Sweden:Uppsala

text: 59.81598077 N 17.66131683 E

text: bioreactor metagenome

characteristic: organism

characteristic: title


text: Acetate

characteristic: External Id

text: live

text: MIGS/MIMS/MIMARKS.miscellaneous

characteristic: NCBI submission model

text: MIMARKS.survey

characteristic: NCBI submission package

characteristic: SRA accession

text: Acetate

text: 50 mM

text: Difference in microbial composition between acetate or propionate enrichment cultures degrading 50mM acetate

text: Enrichment cultures

text: basal medium

text: Sweden:Uppsala

text: 59.81598077 N 17.66131683 E

text: bioreactor metagenome


characteristic: Biological Replicate#

text: Propionate

characteristic: INSDC center name

text: live

text: MIGS/MIMS/MIMARKS.miscellaneous

text: MIMARKS.survey

text: Acetate

text: 50 mM

text: Enrichment cultures

text: basal medium

text: Sweden:Uppsala

text: 59.81598077 N 17.66131683 E

text: bioreactor metagenome


characteristic: Day

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.miscellaneous

text: Acetate (50mM)

characteristic: Substrate

text: Ammonia tolerant VFA degrading enrichment culture grown in serum bottle. Culture supplemented with acetate (50 mM) at day 90 of acetate degradation.

text: Enrichment cultures

text: basal medium

text: Sweden:Uppsala

text: 59.81598077 N 17.66131683 E

text: anaerobic digester metagenome


text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.miscellaneous

text: Propionate (50mM)

characteristic: ammonium

text: Ammonia tolerant VFA degrading enrichment culture grown in serum bottle. Culture supplemented with propionate (50 mM) at day 90 of propionate degradation.

text: Enrichment cultures

text: basal medium

text: Sweden:Uppsala

text: 59.81598077 N 17.66131683 E

text: anaerobic digester metagenome


text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.miscellaneous

text: Propionate (50mM)

text: Ammonia tolerant VFA degrading enrichment culture grown in serum bottle. Culture supplemented with propionate (50 mM) at day 122 of propionate degradation.

characteristic: description

text: Enrichment cultures

text: basal medium

text: Sweden:Uppsala

text: 59.81598077 N 17.66131683 E

text: anaerobic digester metagenome


text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.miscellaneous

text: Acetate

text: Mesophilic ammonia tolerant VFA oxidizing enrichment culture. 4 biological replicates

text: Enrichment cultures

text: Basal medium

text: Sweden:Uppsala

text: 59.81598077 N 17.66131683 E

text: anaerobic digester metagenome

characteristic: temp


characteristic: INSDC first public

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.miscellaneous

text: Acetate

text: Enrichment cultures

text: Mesophilic ammonia tolerant VFA oxidizing enrichment culture

text: Basal medium

text: Sweden:Uppsala

text: 59.81598077 N 17.66131683 E

text: anaerobic digester metagenome


characteristic: INSDC last update

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.miscellaneous

text: Propionate

text: Enrichment cultures

text: Basal medium

text: Sweden:Uppsala

text: 59.81598077 N 17.66131683 E

text: anaerobic digester metagenome


characteristic: INSDC secondary accession

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.miscellaneous

text: Propionate

text: Enrichment cultures

text: Basal medium

text: Sweden:Uppsala

text: mesophilic ammonia tolerant VFA oxidizing enrichment culture; substrate propionate day 122

text: 59.81598077 N 17.66131683 E

text: anaerobic digester metagenome


text: live

characteristic: INSDC status

text: MIMS.me

text: MIGS/MIMS/MIMARKS.miscellaneous

text: Propionate

text: Enrichment cultures

text: Basal medium

text: Sweden:Uppsala

text: mesophilic ammonia tolerant VFA oxidizing enrichment culture; substrate propionate day 178

text: 59.81598077 N 17.66131683 E

text: anaerobic digester metagenome


text: Kyung Hee University

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.host-associated

text: female

characteristic: Sex

text: Keywords: GSC:MIxS;MIMS:6.0

text: Host-associated

text: Digestive tract environment

text: Gut

text: not applicable

text: Drosophila melanogaster

characteristic: host

text: not applicable

text: metagenome

characteristic: organism

text: Metatranscriptome of Drosophila melanogaster gut microbiome


characteristic: External Id

text: Kyung Hee University

text: live

text: MIMS.me

characteristic: NCBI submission model

text: MIGS/MIMS/MIMARKS.host-associated

text: male

text: Keywords: GSC:MIxS;MIMS:6.0

text: Host-associated

text: Digestive tract environment

text: Gut

text: not applicable

text: Drosophila melanogaster

text: not applicable

text: metagenome

characteristic: title


text: Pharmacology & Toxicology, Indiana University School of Medicine

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: RH::TIR1 parental strain

characteristic: cell line

text: tachyzoites

characteristic: cell type

text: missing

text: missing

text: Toxoplasma gondii

text: RH::TIR1 parental strain


text: Molecular Pathology, Osaka Metropolitan University Graduate School of Medicine

characteristic: INSDC center name

text: live

text: Generic

text: missing

text: missing

text: Rattus norvegicus

text: bladder tumor

characteristic: strain

text: bladder tumor

characteristic: tissue

text: bladder, Dimethylarsinic Acid, 2years, BT5

text: dimethylarsinic acid

characteristic: treatment

text: 2 years

characteristic: treatment duration


characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: missing

text: missing

text: Rattus norvegicus

text: bladder tumor

text: bladder tumor

text: bladder, Dimethylarsinic Acid, 2years, BT4

text: dimethylarsinic acid

text: 2 years


text: live

characteristic: INSDC status

text: Generic

text: missing

text: missing

text: Rattus norvegicus

text: bladder tumor

text: bladder tumor

text: bladder, Dimethylarsinic Acid, 2years, BT3

text: dimethylarsinic acid

text: 2 years


text: live

text: Generic

text: missing

text: missing

text: Rattus norvegicus

characteristic: organism

text: bladder tumor

text: bladder tumor

text: bladder, Dimethylarsinic Acid, 2years, BT2

text: dimethylarsinic acid

text: 2 years


characteristic: External Id

text: live

text: Generic

text: missing

text: missing

text: Rattus norvegicus

text: bladder tumor

text: bladder tumor

text: bladder, Dimethylarsinic Acid, 2years, BT1

text: dimethylarsinic acid

text: 2 years


text: live

text: Generic

characteristic: NCBI submission model

text: missing

text: missing

text: Rattus norvegicus

text: bladder urothelium

text: bladder urothelium

text: bladder, control, 2years, C3

text: control

text: 2 years


text: live

text: Generic

text: missing

text: missing

text: Rattus norvegicus

text: bladder urothelium

text: bladder urothelium

text: bladder, control, 2years, C2

characteristic: title

text: control

text: 2 years


text: live

text: Generic

characteristic: NCBI submission package

text: missing

text: missing

text: Rattus norvegicus

text: bladder urothelium

text: bladder urothelium

text: bladder, control, 2years, C1

text: control

text: 2 years


name: MAG15 - Candidatus Syntrophopropionicum ammoniitolerans

text: Swedish University of Agricultural Sciences

text: live

text: MIMAG.miscellaneous

characteristic: ammonium

text: This BioSample is a metagenomic assembly obtained from the anaerobic digester metagenome BioSample: SAMN37379521 and SAMN37379522.

characteristic: derived-from

text: Keywords: GSC:MIxS;MIMAG:6.0

characteristic: description

text: Enrichment cultures

text: Basal medium

characteristic: environmental-sample

text: Sweden:Uppsala

characteristic: isolate

text: mesophilic ammonia tolerant VFA oxidizing enrichment culture; substrate propionate

text: 59.81598077 N 17.66131683 E

text: anaerobic digester metagenome

characteristic: metagenome-source

characteristic: metagenomic

text: metagenomic assembly

characteristic: sample-type

characteristic: temp


MAG16 - Acetomicrobium sp.

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: MIMAG.miscellaneous

text: Keywords: GSC:MIxS;MIMAG:6.0

text: Enrichment cultures

text: Basal medium

text: Sweden:Uppsala

text: 59.81598077 N 17.66131683 E

text: anaerobic digester metagenome

text: Acetomicrobium sp.

text: metagenomic assembly


MAG17 - Methanoculleus sp.

text: live

characteristic: INSDC status

text: MIMAG.miscellaneous

text: Keywords: GSC:MIxS;MIMAG:6.0

text: Enrichment cultures

text: Basal medium

text: Sweden:Uppsala

text: 59.81598077 N 17.66131683 E

text: anaerobic digester metagenome

text: Methanoculleus sp.

characteristic: organism

text: metagenomic assembly


MAG18 - Syntrophaceticus schinkii

characteristic: External Id

text: live

text: MIMAG.miscellaneous

characteristic: NCBI submission model

text: Keywords: GSC:MIxS;MIMAG:6.0

text: Enrichment cultures

text: Basal medium

text: Sweden:Uppsala

text: 59.81598077 N 17.66131683 E

text: anaerobic digester metagenome

text: Syntrophaceticus schinkii

text: metagenomic assembly


text: Northwestern University

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

characteristic: SRA accession

text: missing

text: USA: Evanston, IL

text: Homo sapiens

characteristic: host

text: PA01 restriction enzyme mutant

characteristic: mutation

text: Pseudomonas aeruginosa

text: cell culture

characteristic: strain

text: Microbe sample from Pseudomonas aeruginosa

characteristic: title


text: Northwestern University

text: live

text: Microbe, viral or environmental

text: missing

text: USA: Evanston, IL

text: Homo sapiens

text: PA01 wildtype

text: Pseudomonas aeruginosa

text: cell culture


text: Northwestern University

text: live

text: Microbe, viral or environmental

text: missing

text: USA: Evanston, IL

text: Homo sapiens

text: PA14 wildtype

text: Pseudomonas aeruginosa PA14

text: cell culture

text: Microbe sample from Pseudomonas aeruginosa PA14


text: Northwestern University

text: live

text: Microbe, viral or environmental

text: missing

text: USA: Evanston, IL

text: Homo sapiens

text: PA14 CRISPR and restriction enzyme mutant

text: Pseudomonas aeruginosa PA14

text: cell culture


text: Northwestern University

text: live

text: Microbe, viral or environmental

text: missing

text: USA: Evanston, IL

text: Homo sapiens

text: PA14 CRISPR and restriction enzyme and wadjet mutant

text: Pseudomonas aeruginosa PA14

text: cell culture


text: Northwestern University

text: live

text: Microbe, viral or environmental

text: missing

text: USA: Evanston, IL

text: Homo sapiens

text: PA14 CRISPR mutant

text: Pseudomonas aeruginosa PA14

text: cell culture


text: Northwestern University

text: live

text: Viral

text: missing

text: USA: Evanston, IL

text: Pseudomonas aeruginosa

text: missing

characteristic: isolate

text: cell culture

text: Pseudomonas phage JG024

text: Illumina

characteristic: sequencing method

text: Viral sample from Pseudomonas phage JG024


text: Northwestern University

text: live

text: Viral

text: missing

text: USA: Evanston, IL

text: Pseudomonas aeruginosa

text: missing

text: cell culture

text: Pseudomonas phage JG024

text: Nanopore


text: Northwestern University

text: live

text: Viral

text: missing

text: USA: Evanston, IL

text: Pseudomonas aeruginosa

text: missing

text: cell culture

text: Casadabanvirus DMS3

text: Illumina

text: Viral sample from Casadabanvirus DMS3


text: Northwestern University

text: live

text: Viral

text: missing

text: USA: Evanston, IL

text: Pseudomonas aeruginosa

text: missing

text: cell culture

text: Casadabanvirus DMS3

text: Nanopore

text: Viral sample from Casadabanvirus DMS3


text: Biomedicine, School of Medicine, University of Eastern Finland

text: live

text: Generic

characteristic: cell line

text: CWR22 xenograft derived human prostate carcinoma epithelial cell line

characteristic: cell type

text: missing

text: 3 weeks

characteristic: enz treatment

text: missing

text: 100 nM

characteristic: hormone concentration

text: dexamethasone

characteristic: hormone treatment

text: Homo sapiens

text: Custom AR-V7 siRNA (Dharmacon)

characteristic: sirna treatment


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

text: missing

text: 3 weeks

text: missing

text: EtOH vehicle

text: Homo sapiens

characteristic: organism

text: Custom AR-V7 siRNA (Dharmacon)


characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: missing

text: missing

text: 100 nM

text: dexamethasone

text: Homo sapiens

text: Custom AR-V7 siRNA (Dharmacon)


text: live

text: Generic

text: missing

text: missing

text: EtOH vehicle

text: Homo sapiens

text: Custom AR-V7 siRNA (Dharmacon)

characteristic: title


text: live

text: Generic

characteristic: cell line

text: missing

text: 3 weeks

text: missing

text: 100 nM

text: dexamethasone

text: Homo sapiens

text: Non-targeting control siRNA (Dharmacon, D-001810-10)


text: live

text: Generic

characteristic: cell type

text: missing

text: 3 weeks

text: missing

text: EtOH vehicle

text: Homo sapiens


text: live

text: Generic

text: missing

characteristic: enz treatment

text: missing

text: 100 nM

text: dexamethasone

text: Homo sapiens


text: live

text: Generic

text: missing

text: missing

characteristic: hormone concentration

text: EtOH vehicle

text: Homo sapiens


text: live

text: Generic

text: GR (Cell Signaling, 12041)

characteristic: chip antibody

text: missing

text: 3 weeks

text: missing

text: 100 nM

text: dexamethasone

characteristic: hormone treatment

text: Homo sapiens

text: Custom AR-V7 siRNA (Dharmacon)


characteristic: External Id

text: live

text: Generic

text: GR (Cell Signaling, 12041)

text: missing

text: 3 weeks

text: missing

text: EtOH vehicle

text: Homo sapiens

text: Custom AR-V7 siRNA (Dharmacon)

characteristic: sirna treatment


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: GR (Cell Signaling, 12041)

text: missing

text: missing

text: 100 nM

text: dexamethasone

text: Homo sapiens

text: Custom AR-V7 siRNA (Dharmacon)


characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

text: GR (Cell Signaling, 12041)

text: missing

text: missing

text: EtOH vehicle

text: Homo sapiens

text: Custom AR-V7 siRNA (Dharmacon)


characteristic: INSDC secondary accession

text: live

text: Generic

text: GR (Cell Signaling, 12041)

text: missing

text: 3 weeks

text: missing

text: 100 nM

text: dexamethasone

text: Homo sapiens

characteristic: organism


text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: GR (Cell Signaling, 12041)

text: missing

text: 3 weeks

text: missing

text: EtOH vehicle

text: Homo sapiens


text: live

text: Generic

characteristic: SRA accession

text: GR (Cell Signaling, 12041)

text: missing

text: missing

text: 100 nM

text: dexamethasone

text: Homo sapiens

characteristic: title


text: live

text: Generic

characteristic: cell line

characteristic: cell type

text: GR (Cell Signaling, 12041)

text: missing

text: missing

text: EtOH vehicle

text: Homo sapiens


text: DBHi, Children's Hospital of Philadelphia

text: live

text: Generic

text: TMD8 clone 9

text: iPSC-derived CD43+41+235+ progenitors

text: missing

text: DYRK1A knockout

characteristic: genotype

text: missing

text: Homo sapiens

text: iPSC

text: iPSC

characteristic: tissue

text: T21/GATA1s/DYRK1A-/-/- Day 7 progenitors, clone 2 biol rep 3 [S33]

text: Hematopoietic EB differentiation

characteristic: treatment


characteristic: External Id

text: live

text: Generic

text: TMD8 clone 9

text: iPSC-derived CD43+41+235+ progenitors

text: missing

text: DYRK1A knockout

text: missing

text: Homo sapiens

text: iPSC

text: iPSC

text: T21/GATA1s/DYRK1A-/-/- Day 7 progenitors, clone 2 biol rep 2 [S32]

text: Hematopoietic EB differentiation


text: live

text: Generic

text: TMD8 clone 9

text: iPSC-derived CD43+41+235+ progenitors

text: missing

text: DYRK1A knockout

text: missing

text: Homo sapiens

text: iPSC

text: iPSC

text: T21/GATA1s/DYRK1A-/-/- Day 7 progenitors, clone 1 biol rep 3 [S31]

text: Hematopoietic EB differentiation


text: live

text: Generic

text: TMD8 clone 9

text: iPSC-derived CD41+CD42b+ megakaryocytes

text: missing

text: DYRK1A untargeted

text: missing

text: Homo sapiens

text: iPSC

text: iPSC

text: T21/GATA1s/DYRK1A+/+/+ Day 4 megakaryocytes, biol rep 4 [S30]

text: Hematopoietic EB differentiation


text: live

text: Generic

text: TMD8 clone 9

text: iPSC-derived CD41+CD42b+ megakaryocytes

text: missing

text: DYRK1A knockout

text: missing

text: Homo sapiens

text: iPSC

text: iPSC

text: T21/GATA1s/DYRK1A-/-/- Day 4 megakaryocytes, clone 2 biol rep 3 [S29]

text: Hematopoietic EB differentiation


text: live

text: Generic

text: TMD8 clone 9

text: iPSC-derived CD41+CD42b+ megakaryocytes

text: missing

text: DYRK1A knockout

text: missing

text: Homo sapiens

text: iPSC

text: iPSC

text: T21/GATA1s/DYRK1A-/-/- Day 4 megakaryocytes, clone 1 biol rep 3 [S28]

text: Hematopoietic EB differentiation


text: live

text: Generic

text: TMD8 clone 9

text: iPSC-derived CD43+41+235+ progenitors

text: missing

text: DYRK1A untargeted

text: missing

text: Homo sapiens

text: iPSC

text: iPSC

text: T21/GATA1s/DYRK1A+/+/+ Day 7 progenitors, biol rep 3 [S27]

text: Hematopoietic EB differentiation


text: live

text: Generic

text: TMD8 clone 9

text: iPSC-derived CD43+41+235+ progenitors

text: missing

text: DYRK1A knockout

text: missing

text: Homo sapiens

text: iPSC

text: iPSC

text: T21/GATA1s/DYRK1A-/-/- Day 7 progenitors, clone 2 biol rep 1 [S26]

text: Hematopoietic EB differentiation


text: live

text: Generic

text: TMD8 clone 9

text: iPSC-derived CD43+41+235+ progenitors

text: missing

text: DYRK1A knockout

text: missing

text: Homo sapiens

text: iPSC

text: iPSC

text: T21/GATA1s/DYRK1A-/-/- Day 7 progenitors, clone 1 biol rep 2 [S25]

text: Hematopoietic EB differentiation


text: live

text: Generic

text: TMD8 clone 9

text: iPSC-derived CD41+CD42b+ megakaryocytes

text: missing

text: DYRK1A knockout

text: missing

text: Homo sapiens

text: iPSC

text: iPSC

text: T21/GATA1s/DYRK1A-/-/- Day 4 megakaryocytes, clone 2 biol rep 2 [S24]

text: Hematopoietic EB differentiation


text: live

text: Generic

text: TMD8 clone 9

text: iPSC-derived CD41+CD42b+ megakaryocytes

text: missing

text: DYRK1A knockout

text: missing

text: Homo sapiens

text: iPSC

text: iPSC

text: T21/GATA1s/DYRK1A-/-/- Day 4 megakaryocytes, clone 1 biol rep 2 [S23]

text: Hematopoietic EB differentiation


text: live

text: Generic

text: TMD8 clone 9

text: iPSC-derived CD41+CD42b+ megakaryocytes

text: missing

text: DYRK1A untargeted

text: missing

text: Homo sapiens

text: iPSC

text: iPSC

text: T21/GATA1s/DYRK1A+/+/+ Day 4 megakaryocytes, biol rep 3 [S22]

text: Hematopoietic EB differentiation


text: live

text: Generic

text: TMD8 clone 9

text: iPSC-derived CD41+CD42b+ megakaryocytes

text: missing

text: DYRK1A knockout

text: missing

text: Homo sapiens

text: iPSC

text: iPSC

text: T21/GATA1s/DYRK1A-/-/- Day 4 megakaryocytes, clone 2 biol rep 1 [S21]

text: Hematopoietic EB differentiation


text: live

text: Generic

text: TMD8 clone 9

text: iPSC-derived CD41+CD42b+ megakaryocytes

text: missing

text: DYRK1A knockout

text: missing

text: Homo sapiens

text: iPSC

text: iPSC

text: T21/GATA1s/DYRK1A-/-/- Day 4 megakaryocytes, clone 1 biol rep 1 [S20]

text: Hematopoietic EB differentiation


text: live

text: Generic

text: TMD8 clone 9

text: iPSC-derived CD41+CD42b+ megakaryocytes

text: missing

text: DYRK1A untargeted

text: missing

text: Homo sapiens

text: iPSC

text: iPSC

text: T21/GATA1s/DYRK1A+/+/+ Day 4 megakaryocytes, biol rep 2 [S19]

text: Hematopoietic EB differentiation


text: live

text: Generic

text: TMD8 clone 9

text: iPSC-derived CD43+41+235+ progenitors

text: missing

text: DYRK1A knockout

text: missing

text: Homo sapiens

text: iPSC

text: iPSC

text: T21/GATA1s/DYRK1A-/-/- Day 7 progenitors, clone 1 biol rep 1 [S18]

text: Hematopoietic EB differentiation


text: DBHi, Children's Hospital of Philadelphia

text: live

text: Generic

text: TMD8 clone 9

text: iPSC-derived CD43+41+235+ progenitors

text: missing

text: DYRK1A untargeted

text: missing

text: Homo sapiens

text: iPSC

text: iPSC

text: T21/GATA1s/DYRK1A+/+/+ Day 7 progenitors, biol rep 2 [S17]

text: Hematopoietic EB differentiation


text: live

text: Generic

text: TMD8 clone 9

text: iPSC-derived CD41+CD42b+ megakaryocytes

text: missing

text: DYRK1A untargeted

text: missing

text: Homo sapiens

text: iPSC

text: iPSC

text: T21/GATA1s/DYRK1A+/+/+ Day 4 megakaryocytes, biol rep 1 [S16]

text: Hematopoietic EB differentiation


text: live

text: Generic

text: TMD8 clone 9

text: iPSC-derived CD43+41+235+ progenitors

text: missing

text: DYRK1A untargeted

text: missing

text: Homo sapiens

text: iPSC

text: iPSC

text: T21/GATA1s/DYRK1A+/+/+ Day 7 progenitors, biol rep 1 [S15]

text: Hematopoietic EB differentiation


ClonalExpansion

text: live

text: Human

text: not applicable

characteristic: age

text: Andrea Calabria, Daniela Cesana, Eugenio Montini, San Raffaele Telethon Institute for Gene Therapy, Milan, Italy

text: not applicable

text: not applicable

text: =CONCATENATE("Cell lines mixed, serial dilutions, to disambiguate vector integration sites at different VCN (DNA shearing by sonication). Each sample is performed in triplcates (3 PCRs); samples are also grouped by amount of DNA (100, 20, or 5 ng of DNA).")

characteristic: isolate

text: Homo sapiens

text: not applicable

characteristic: sex

text: not applicable

text: ClonalExpansion


text: Duke University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: primary T cell

text: CD8+ T cells (OVA-tetramer-low)

text: missing

text: WT

text: missing

text: Mus musculus

text: Spleen

text: Spleen

text: Listeria infection


text: Duke University

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: primary T cell

text: CD8+ T cells (OVA-tetramer-high)

text: missing

text: WT

text: missing

text: Mus musculus

characteristic: organism

text: Spleen

text: Spleen

text: Listeria infection


text: Duke University

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: primary T cell

text: CD8+ T cells

text: missing

text: WT (melanoma cell)

text: missing

text: Mus musculus

text: Lymph node

text: Lymph node

text: control plus anti-PD-1


text: Duke University

text: live

text: Generic

text: primary T cell

characteristic: cell line

text: CD8+ T cells

characteristic: cell type

text: missing

text: NGF-/- (melanoma cell)

text: missing

text: Mus musculus

text: Lymph node

text: Lymph node

characteristic: title

text: Knockout


text: Duke University

text: live

text: Generic

text: primary T cell

text: CD8+ T cells

text: missing

text: NGF-/- (melanoma cell)

characteristic: genotype

text: missing

text: Mus musculus

text: Lymph node

text: Lymph node

characteristic: tissue

text: Knockout plus anti-PD-1

characteristic: treatment


characteristic: External Id

text: Duke University

text: live

text: Generic

text: melanoma

text: missing

text: WT (melanoma cell)

text: missing

text: Mus musculus

text: Tumor

text: Tumor

text: YUMM_NT_3 (biol rep 3)

text: Control


text: Duke University

text: live

text: Generic

text: melanoma

text: missing

text: WT (melanoma cell)

text: missing

text: Mus musculus

text: Tumor

text: Tumor

text: YUMM_NT_2 (biol rep 2)

text: Control


text: Duke University

text: live

text: Generic

text: melanoma

text: missing

text: WT (melanoma cell)

text: missing

text: Mus musculus

text: Tumor

text: Tumor

text: YUMM_NT_1 (biol rep 1)

text: Control


text: Duke University

text: live

text: Generic

text: melanoma

text: missing

text: NGF-/- (melanoma cell)

text: missing

text: Mus musculus

text: Tumor

text: Tumor

text: YUMM_KO_3 (biol rep 3)

text: Knockout


text: Duke University

text: live

text: Generic

text: melanoma

text: missing

text: NGF-/- (melanoma cell)

text: missing

text: Mus musculus

text: Tumor

text: Tumor

text: YUMM_KO_2 (biol rep 2)

text: Knockout


text: Duke University

text: live

text: Generic

text: melanoma

text: missing

text: NGF-/- (melanoma cell)

text: missing

text: Mus musculus

text: Tumor

text: Tumor

text: YUMM_KO_1 (biol rep 1)

text: Knockout


text: Duke University

text: live

text: Generic

text: melanoma

text: missing

text: WT (melanoma cell)

text: missing

text: Mus musculus

text: Tumor

text: Tumor

text: B16OVA_NT_4 (biol rep 4)

text: Control


text: Duke University

text: live

text: Generic

text: melanoma

text: missing

text: WT (melanoma cell)

text: missing

text: Mus musculus

text: Tumor

text: Tumor

text: B16OVA_NT_3 (biol rep 3)

text: Control


text: Duke University

text: live

text: Generic

text: melanoma

text: missing

text: WT (melanoma cell)

text: missing

text: Mus musculus

text: Tumor

text: Tumor

text: B16OVA_NT_2 (biol rep 2)

text: Control


text: Duke University

text: live

text: Generic

text: melanoma

text: missing

text: WT (melanoma cell)

text: missing

text: Mus musculus

text: Tumor

text: Tumor

text: B16OVA_NT_1 (biol rep 1)

text: Control


text: Duke University

text: live

text: Generic

text: melanoma

text: missing

text: NGF-/- (melanoma cell)

text: missing

text: Mus musculus

text: Tumor

text: Tumor

text: B16OVA_KO_4 (biol rep 4)

text: Knockout


text: Duke University

text: live

text: Generic

text: melanoma

text: missing

text: NGF-/- (melanoma cell)

text: missing

text: Mus musculus

text: Tumor

text: Tumor

text: B16OVA_KO_3 (biol rep 3)

text: Knockout


text: Duke University

text: live

text: Generic

text: melanoma

text: missing

text: NGF-/- (melanoma cell)

text: missing

text: Mus musculus

text: Tumor

text: Tumor

text: B16OVA_KO_2 (biol rep 2)

text: Knockout


text: Duke University

text: live

text: Generic

text: melanoma

text: missing

text: NGF-/- (melanoma cell)

text: missing

text: Mus musculus

text: Tumor

text: Tumor

text: B16OVA_KO_1 (biol rep 1)

text: Knockout


text: Jilin Agricultural University

text: live

text: Metagenome or environmental

text: China:ChangChun

characteristic: isolate

text: root

text: 43 N 129 E

text: root metagenome

text: Metagenome or environmental sample from root metagenome


F4X1-16sfibrous root

text: Jilin Agricultural University

characteristic: INSDC center name

text: live

text: Metagenome or environmental

text: China:ChangChun

text: root

text: 43 N 129 E

text: root metagenome


F4X2-16sfibrous root

text: Jilin Agricultural University

characteristic: INSDC first public

text: live

text: Metagenome or environmental

text: China:ChangChun

text: root

text: 43 N 129 E

text: root metagenome


F4X3-16sfibrous root

text: Jilin Agricultural University

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: China:ChangChun

text: root

text: 43 N 129 E

text: root metagenome


F4X4-16sfibrous root

text: Jilin Agricultural University

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

text: China:ChangChun

text: root

text: 43 N 129 E

text: root metagenome


F4X5-16sfibrous root

text: Jilin Agricultural University

text: live

characteristic: INSDC status

text: Metagenome or environmental

text: China:ChangChun

text: root

text: 43 N 129 E

text: root metagenome


F5X1-16sfibrous root

text: Jilin Agricultural University

text: live

text: Metagenome or environmental

text: China:ChangChun

text: root

text: 43 N 129 E

text: root metagenome

characteristic: organism


F5X2-16sfibrous root

text: Jilin Agricultural University

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

text: China:ChangChun

text: root

text: 43 N 129 E

text: root metagenome


F5X3-16sfibrous root

text: Jilin Agricultural University

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: China:ChangChun

text: root

text: 43 N 129 E

text: root metagenome


F5X4-16sfibrous root

text: Jilin Agricultural University

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: China:ChangChun

text: root

text: 43 N 129 E

text: root metagenome


F5X5-16sfibrous root

text: Jilin Agricultural University

text: live

text: Metagenome or environmental

text: China:ChangChun

text: root

text: 43 N 129 E

text: root metagenome


F5X6-16sfibrous root

text: Jilin Agricultural University

text: live

text: Metagenome or environmental

text: China:ChangChun

text: root

text: 43 N 129 E

text: root metagenome


text: Department of Biochemistry, School of Medicine, Institute for Tumor Research

text: live

text: Generic

text: immortalized cell lines from KPRL/F-TAM(-) lung cancers (KPR-).

characteristic: cell line

text: Mus musculus, mouse

text: missing

text: RUNX3 -/+

text: missing

text: Mus musculus

text: Lung cancer

text: Lung cancer

text: RUNX3 restored cells [KRP16h]

text: 1 μM 4-OHT


text: live

text: Generic

text: Mus musculus, mouse

characteristic: cell type

text: missing

text: RUNX3 -/-

text: missing

text: Mus musculus

text: Lung cancer

text: Lung cancer

text: RUNX3 knock out cells [KRP0h]

text: 1 μM 4-OHT


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Schizocarpum dieterleae

text: leaf

text: Targeted sequencing of Schizocarpum dieterleae

characteristic: title


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Rhinotropis desertorum

text: leaf

text: Targeted sequencing of Rhinotropis desertorum


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Dalbergia monetaria

text: leaf

text: Targeted sequencing of Dalbergia ovalis


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Securidaca lanceolata

text: leaf

text: Targeted sequencing of Securidaca lanceolata


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Pouzolzia denudata

text: leaf

text: Targeted sequencing of Pouzolzia denudata


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Lonchocarpus purpureus

text: leaf

text: Targeted sequencing of Lonchocarpus purpureus


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Marina spiciformis

text: leaf

text: Targeted sequencing of Marina spiciformis


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Tephrosia macrantha

text: leaf

text: Targeted sequencing of Tephrosia macrantha


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Dalea dorycnioides

text: leaf

text: Targeted sequencing of Dalea dorycnoides


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Inga ismaelis

text: leaf

text: Targeted sequencing of Inga ismaelis


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Inga flexuosa

text: leaf

text: Targeted sequencing of Inga flexuosa


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Indigofera guatemalensis

text: leaf

text: Targeted sequencing of Indigofera guatemalensis


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Inga laevigata

text: leaf

text: Targeted sequencing of Inga laevigata


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Indigofera langlassei

text: leaf

text: Targeted sequencing of Indigofera langlassei


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Indigofera incompta

text: leaf

text: Targeted sequencing of Indigofera incompta


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Inga inicuil

text: leaf

text: Targeted sequencing of Inga inicuil


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Lonchocarpus orizabensis

text: leaf

text: Targeted sequencing of Lonchocarpus orizabensis


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Indigofera jaliscensis

text: leaf

text: Targeted sequencing of Indigofera jaliscensis


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Lonchocarpus balsensis

text: leaf

text: Targeted sequencing of Lonchocarpus balsensis


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Indigofera nesophila

text: leaf

text: Targeted sequencing of Indigofera nesophila


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Indigofera densiflora

text: leaf

text: Targeted sequencing of Indigofera densiflora


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Lonchocarpus nitidus

text: leaf

text: Targeted sequencing of Lonchocarpus nitidus


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Lonchocarpus verrucosus

text: leaf

text: Targeted sequencing of Lonchocarpus verrucosus


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Lonchocarpus obovatus

text: leaf

text: Targeted sequencing of Lonchocarpus obovatus


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Lonchocarpus jaliscensis

text: leaf

text: Targeted sequencing of Lonchocarpus jaliscensis


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Inga calcicola

text: leaf

text: Targeted sequencing of Inga calcicola


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Marah gilensis

text: leaf

text: Targeted sequencing of Marah gilensis


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Echinopepon milleflorus

text: leaf

text: Targeted sequencing of Echinopepon milliflorus


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Hanburia parviflora

text: leaf

text: Targeted sequencing of Hanburia parviflora


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Polygala xanti

text: leaf

text: Targeted sequencing of Polygala xanti


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Inga calderonii

text: leaf

text: Targeted sequencing of Inga calderonii


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Inga sinacae

text: leaf

text: Targeted sequencing of Inga sinacae


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Ventilago diffusa

text: leaf

text: Targeted sequencing of Ventilago diffusa


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Gouania eurycarpa

text: leaf

text: Targeted sequencing of Gouania eurycarpa


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Naucleopsis concinna

text: leaf

text: Targeted sequencing of Naucleopsis concinna


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Rhamnella rubrinervis

text: leaf

text: Targeted sequencing of Chaydaia rubrinervis


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Cyclanthera minima

text: leaf

text: Targeted sequencing of Cremastopus minimus


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Phaseolus vulcanicus

text: leaf

text: Targeted sequencing of Phaseolus vulcanicus


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Inga uruguensis

text: leaf

text: Targeted sequencing of Inga uruguensis


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Newtonia paucijuga

text: leaf

text: Targeted sequencing of Newtonia paucijuga


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Indigofera arenophila

text: leaf

text: Targeted sequencing of Indigofera arenophila


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Tephrosia leucantha

text: leaf

text: Targeted sequencing of Tephrosia leucantha


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Tephrosia guayameoensis

text: leaf

text: Targeted sequencing of Tephrosia guayameoensis


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Tephrosia cuernavacana

text: leaf

text: Targeted sequencing of Tephrosia cuernavacana


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Gretheria campylacantha

text: leaf

text: Targeted sequencing of Havardia campylacanthus


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Indigofera salmoniflora

text: leaf

text: Targeted sequencing of Indigofera salmoniflora


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Lonchocarpus argyrotrichus

text: leaf

text: Targeted sequencing of Lonchocarpus agyrotrichus


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Macropsychanthus rufescens

text: leaf

text: Targeted sequencing of Dioclea rufescens


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Oxytropis dissitiflora

text: leaf

text: Targeted sequencing of Oxytropis dissitiflora


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Pilea dombeyana

text: leaf

text: Targeted sequencing of Pilea dombeyana


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Phenax laxiflorus

text: leaf

text: Targeted sequencing of Phenax laxiflorus


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Grona setigera

text: leaf

text: Targeted sequencing of Grona setigera


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Mimosa margaritae

text: leaf

text: Targeted sequencing of Mimosa margaritae


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Mimosa xochipalensis

text: leaf

text: Targeted sequencing of Mimosa xochipalensis


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Tylosema fassoglense

text: leaf

text: Targeted sequencing of Tylosema fassoglensis


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Bauhinia augusti

text: leaf

text: Targeted sequencing of Bauhinia augustii


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Lysiphyllum dewitii

text: leaf

text: Targeted sequencing of Lysiphyllum dewitii


text: Mississippi State University

text: live

text: Plant

text: missing

text: adult

text: missing

text: Schizocarpum parviflorum

text: leaf

text: Targeted sequencing of Schizocarpum parviflorum


text: University of the Sunshine Coast

text: live

text: Invertebrate

text: Sonja Matthee, Jeanette M. Wentzel

text: Egg

text: South Africa: Manyeleti Nature Reserve, Mpumalanga Province

text: Loxodonta africana

characteristic: host

text: Mpumalanga, South Africa

text: Haematomyzus elephantis

text: Egg

text: African savanna elephant louse


text: plant signal transduction, Hanyang univ.

text: live

text: Generic

text: whole plant

text: missing

characteristic: ecotype

text: BZR1 overexpression in Columbia-0

characteristic: genotype

text: missing

text: Arabidopsis thaliana

text: whole plant

text: whole plant

characteristic: tissue

text: BZR1-YFP, bio rep 2

text: non-treatment


characteristic: External Id

text: live

text: Generic

text: whole plant

text: missing

text: BZR1 overexpression in Columbia-0

text: missing

text: Arabidopsis thaliana

text: whole plant

text: whole plant

text: BZR1-YFP, bio rep 1

text: non-treatment

characteristic: treatment


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: whole plant

text: missing

text: BEH2 overexpression in Columbia-0

text: missing

text: Arabidopsis thaliana

text: whole plant

text: whole plant

text: BEH2-YFP, bio rep 2

text: non-treatment


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: whole plant

text: missing

text: BEH2 overexpression in Columbia-0

text: missing

text: Arabidopsis thaliana

text: whole plant

text: whole plant

text: BEH2-YFP, bio rep 1

text: non-treatment


text: live

characteristic: INSDC status

text: Generic

text: whole plant

text: missing

text: wild-type

text: missing

text: Arabidopsis thaliana

characteristic: organism

text: whole plant

text: whole plant

text: Col-0, bio rep 2

text: non-treatment


text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: whole plant

text: missing

text: wild-type

text: missing

text: Arabidopsis thaliana

text: whole plant

text: whole plant

text: Col-0, bio rep 1

text: non-treatment


text: live

text: Generic

characteristic: SRA accession

text: whole plant

text: missing

text: wild-type

text: missing

text: Arabidopsis thaliana

text: whole plant

text: whole plant

text: Col-0, treatment BL, bio rep 2

text: treatment brassinosteroid


text: live

text: Generic

text: whole plant

characteristic: cell type

text: missing

text: wild-type

text: missing

text: Arabidopsis thaliana

text: whole plant

text: whole plant

text: Col-0, treatment BL, bio rep 1

text: treatment brassinosteroid


text: live

text: Generic

text: whole plant

text: missing

text: wild-type

text: missing

text: Arabidopsis thaliana

text: whole plant

text: whole plant

text: Col-0, non-treatment BL, bio rep 2

characteristic: title

text: non-treatment


text: live

text: Generic

text: whole plant

text: missing

text: wild-type

text: missing

text: Arabidopsis thaliana

text: whole plant

text: whole plant

text: Col-0, non-treatment BL, bio rep 1

text: non-treatment


STR amplicons from human cell lines

text: Saint Jude Children's Research Hospital

text: live

text: Human

text: not applicable

characteristic: age

text: missing

text: Contains all fastq files generated from STR amplicons for human cell lines BJFF.6 and AN1.1

characteristic: description

text: USA

text: missing

characteristic: isolate

text: Homo sapiens

text: not applicable

characteristic: sex

text: transformed cell lines

characteristic: strain

text: various

text: NGS data from human cell lines


characteristic: External Id

text: harris, medicine, vumc

text: live

text: Generic

text: missing

text: KO

characteristic: genotype

text: missing

text: Mus musculus

text: kidney

text: kidney

characteristic: tissue

text: uuo 1day

characteristic: treatment


text: harris, medicine, vumc

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: missing

text: WT

text: missing

text: Mus musculus

text: kidney

text: kidney

text: uuo 1day


text: harris, medicine, vumc

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: missing

text: KO

text: missing

text: Mus musculus

characteristic: organism

text: kidney

text: kidney

text: uuo 3days


text: harris, medicine, vumc

text: live

text: Generic

characteristic: SRA accession

text: missing

text: WT

text: missing

text: Mus musculus

text: kidney

text: kidney

characteristic: title

text: uuo 3days


1A_wt control

text: Tel Aviv University

text: live

text: Microbe, viral or environmental

characteristic: Replicate

text: Israel: Tel-Aviv

text: lab strain AES6969

characteristic: isolate

text: Lab culture

text: Bacillus subtilis

text: no infection

characteristic: phage infection

text: bacterial culture

text: Microbe sample from Bacillus subtilis

characteristic: xylose concentration


characteristic: External Id

text: Tel Aviv University

text: live

text: Microbe, viral or environmental

text: Israel: Tel-Aviv

text: lab strain AES6969

text: Lab culture

text: Bacillus subtilis

text: bacterial culture

characteristic: strain

text: Microbe sample from Bacillus subtilis


text: Tel Aviv University

text: live

text: Microbe, viral or environmental

text: Israel: Tel-Aviv

text: lab strain AES8630

text: Lab culture

text: Bacillus subtilis

text: bacterial culture

text: Microbe sample from Bacillus subtilis


text: Tel Aviv University

text: live

text: Microbe, viral or environmental

text: Israel: Tel-Aviv

text: lab strain AES8624

text: Lab culture

text: Bacillus subtilis

text: bacterial culture

text: Microbe sample from Bacillus subtilis


2A_wt control

text: Tel Aviv University

text: live

text: Microbe, viral or environmental

text: Israel: Tel-Aviv

text: lab strain AES6969

text: Lab culture

text: Bacillus subtilis

text: no infection

text: bacterial culture

text: Microbe sample from Bacillus subtilis


Prostomium Sample 1

text: Wake Forest University

text: live

text: Invertebrate

text: Prostomium biological replicate 1

text: European nightcrawler

characteristic: breed

text: Adult (tissue was only collected from earthworms with a visible clitellum)

text: not applicable

text: not applicable

characteristic: host

text: not applicable

text: lab colony founded using earthworms purchased from a commercial supplier (unclejimswormfarm.com)

text: Dendrobaena veneta

text: Prostomium

characteristic: tissue

text: Invertebrate sample from Dendrobaena veneta


Prostomium Sample 2

text: Wake Forest University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Invertebrate

text: Prostomium biological replicate 2

text: European nightcrawler

text: not applicable

text: not applicable

text: not applicable

text: Dendrobaena veneta

text: Prostomium