text: live

text: Human

text: ling yang

text: HF patients without depressive symptoms 5

characteristic: description

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 40

text: male

text: gut

text: HF patients without depressive symptoms


status: PUBLIC

characteristic: External Id

text: The Third Affiliated Hospital of Soochow University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Human

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

tag: attribute

characteristic: age

text: ling yang

text: HF patients without depressive symptoms 6

text: China: Changzhou

text: fecal

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: biological replicate 41

characteristic: replicate

text: female

characteristic: sex

text: gut

characteristic: tissue

text: HF patients without depressive symptoms

characteristic: title


text: live

text: Human

text: ling yang

text: HF patients without depressive symptoms 7

characteristic: description

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 42

text: female

text: gut

text: HF patients without depressive symptoms


characteristic: External Id

text: live

text: Human

text: ling yang

text: HF patients without depressive symptoms 8

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 43

text: female

text: gut

text: HF patients without depressive symptoms


characteristic: INSDC center name

text: live

text: Human

text: ling yang

text: HF patients without depressive symptoms 9

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 44

text: male

text: gut

text: HF patients without depressive symptoms


characteristic: INSDC first public

text: live

text: Human

text: ling yang

text: HF patients without depressive symptoms 10

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 45

text: male

text: gut

text: HF patients without depressive symptoms


characteristic: INSDC last update

text: live

text: Human

text: ling yang

text: HF patients without depressive symptoms 11

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 46

text: female

text: gut

text: HF patients without depressive symptoms


characteristic: INSDC secondary accession

text: live

text: Human

text: ling yang

text: HF patients without depressive symptoms 12

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 47

text: male

text: gut

text: HF patients without depressive symptoms


text: live

characteristic: INSDC status

text: Human

text: ling yang

text: HF patients without depressive symptoms 13

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 48

text: male

text: gut

text: HF patients without depressive symptoms


text: live

text: Human

characteristic: NCBI submission model

text: ling yang

text: HF patients without depressive symptoms 14

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 49

text: male

text: gut

text: HF patients without depressive symptoms


text: live

text: Human

characteristic: NCBI submission package

text: ling yang

text: HF patients without depressive symptoms 15

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 50

text: female

text: gut

text: HF patients without depressive symptoms


text: live

text: Human

characteristic: SRA accession

text: ling yang

text: HF patients without depressive symptoms 16

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 51

text: male

text: gut

text: HF patients without depressive symptoms


text: live

text: Human

characteristic: age

text: ling yang

text: HF patients without depressive symptoms 17

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 52

text: female

text: gut

text: HF patients without depressive symptoms


text: live

text: Human

text: ling yang

text: HF patients without depressive symptoms 18

text: China: Changzhou

text: fecal

characteristic: isolate

text: Homo sapiens

text: biological replicate 53

text: female

text: gut

text: HF patients without depressive symptoms


text: live

text: Human

text: ling yang

text: HF patients without depressive symptoms 19

text: China: Changzhou

text: fecal

text: Homo sapiens

characteristic: organism

text: biological replicate 54

text: male

text: gut

text: HF patients without depressive symptoms


text: live

text: Human

text: ling yang

text: HF patients without depressive symptoms 20

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 55

characteristic: replicate

text: male

text: gut

text: HF patients without depressive symptoms


text: live

text: Human

text: ling yang

text: HF patients without depressive symptoms 21

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 56

text: male

characteristic: sex

text: gut

text: HF patients without depressive symptoms


text: The Third Affiliated Hospital of Soochow University

text: live

text: Human

text: ling yang

text: HF patients without depressive symptoms 22

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 57

text: male

text: gut

characteristic: tissue

text: HF patients without depressive symptoms


text: live

text: Human

text: ling yang

text: HF patients without depressive symptoms 23

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 58

text: male

text: gut

text: HF patients without depressive symptoms

characteristic: title


text: live

text: Human

text: ling yang

text: HF patients without depressive symptoms 24

characteristic: description

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 59

text: male

text: gut

text: HF patients without depressive symptoms


characteristic: External Id

text: live

text: Human

text: ling yang

text: HF patients without depressive symptoms 25

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 60

text: male

text: gut

text: HF patients without depressive symptoms


characteristic: INSDC center name

text: live

text: Human

text: ling yang

text: HF patients without depressive symptoms 26

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 61

text: male

text: gut

text: HF patients without depressive symptoms


characteristic: INSDC first public

text: live

text: Human

text: ling yang

text: HF patients without depressive symptoms 27

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 62

text: male

text: gut

text: HF patients without depressive symptoms


characteristic: INSDC last update

text: live

text: Human

text: ling yang

text: HF patients without depressive symptoms 28

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 63

text: male

text: gut

text: HF patients without depressive symptoms


characteristic: INSDC secondary accession

text: live

text: Human

text: ling yang

text: HF patients without depressive symptoms 29

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 64

text: male

text: gut

text: HF patients without depressive symptoms


text: live

characteristic: INSDC status

text: Human

text: ling yang

text: HF patients without depressive symptoms 30

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 65

text: male

text: gut

text: HF patients without depressive symptoms


text: live

text: Human

characteristic: NCBI submission model

text: ling yang

text: HF patients without depressive symptoms 31

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 66

text: male

text: gut

text: HF patients without depressive symptoms


text: live

text: Human

characteristic: NCBI submission package

text: ling yang

text: HF patients without depressive symptoms 32

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 67

text: male

text: gut

text: HF patients without depressive symptoms


text: live

text: Human

characteristic: SRA accession

text: ling yang

text: HF patients without depressive symptoms 33

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 68

text: male

text: gut

text: HF patients without depressive symptoms


text: live

text: Human

characteristic: age

text: ling yang

text: HF patients without depressive symptoms 34

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 69

text: male

text: gut

text: HF patients without depressive symptoms


text: live

text: Human

text: ling yang

text: HF patients without depressive symptoms 35

text: China: Changzhou

text: fecal

characteristic: isolate

text: Homo sapiens

text: biological replicate 70

text: male

text: gut

text: HF patients without depressive symptoms


text: live

text: Human

text: ling yang

text: HF patients without depressive symptoms 36

text: China: Changzhou

text: fecal

text: Homo sapiens

characteristic: organism

text: biological replicate 71

text: male

text: gut

text: HF patients without depressive symptoms


text: live

text: Human

text: ling yang

text: healthy control 1

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 72

characteristic: replicate

text: female

text: gut

text: healthy control


text: live

text: Human

text: ling yang

text: healthy control 2

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 73

text: female

characteristic: sex

text: gut

text: healthy control


text: live

text: Human

text: ling yang

text: healthy control 3

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 74

text: male

text: gut

characteristic: tissue

text: healthy control


text: live

text: Human

text: ling yang

text: healthy control 4

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 75

text: male

text: gut

text: healthy control

characteristic: title


text: live

text: Human

text: ling yang

text: healthy control 5

characteristic: description

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 76

text: female

text: gut

text: healthy control


characteristic: External Id

text: live

text: Human

text: ling yang

text: healthy control 6

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 77

text: male

text: gut

text: healthy control


characteristic: INSDC center name

text: live

text: Human

text: ling yang

text: healthy control 7

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 78

text: male

text: gut

text: healthy control


characteristic: INSDC first public

text: live

text: Human

text: ling yang

text: healthy control 8

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 79

text: male

text: gut

text: healthy control


characteristic: INSDC last update

text: live

text: Human

text: ling yang

text: healthy control 9

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 80

text: male

text: gut

text: healthy control


characteristic: INSDC secondary accession

text: live

text: Human

text: ling yang

text: healthy control 10

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 81

text: female

text: gut

text: healthy control


text: live

characteristic: INSDC status

text: Human

text: ling yang

text: healthy control 11

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 82

text: female

text: gut

text: healthy control


text: live

text: Human

characteristic: NCBI submission model

text: ling yang

text: healthy control 12

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 83

text: male

text: gut

text: healthy control


text: live

text: Human

characteristic: NCBI submission package

text: ling yang

text: healthy control 13

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 84

text: female

text: gut

text: healthy control


text: live

text: Human

characteristic: SRA accession

text: ling yang

text: healthy control 14

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 85

text: female

text: gut

text: healthy control


text: live

text: Human

characteristic: age

text: ling yang

text: healthy control 15

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 86

text: female

text: gut

text: healthy control


text: live

text: Human

text: ling yang

text: healthy control 16

text: China: Changzhou

text: fecal

characteristic: isolate

text: Homo sapiens

text: biological replicate 87

text: male

text: gut

text: healthy control


text: live

text: Human

text: ling yang

text: healthy control 17

text: China: Changzhou

text: fecal

text: Homo sapiens

characteristic: organism

text: biological replicate 88

text: male

text: gut

text: healthy control


text: live

text: Human

text: ling yang

text: healthy control 18

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 89

characteristic: replicate

text: female

text: gut

text: healthy control


text: live

text: Human

text: ling yang

text: healthy control 19

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 90

text: female

characteristic: sex

text: gut

text: healthy control


text: live

text: Human

text: ling yang

text: healthy control 20

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 91

text: female

text: gut

characteristic: tissue

text: healthy control


text: live

text: Human

text: ling yang

text: healthy control 21

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 92

text: female

text: gut

text: healthy control

characteristic: title


text: live

text: Human

text: ling yang

text: healthy control 22

characteristic: description

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 93

text: male

text: gut

text: healthy control


characteristic: External Id

text: live

text: Human

text: ling yang

text: healthy control 23

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 94

text: male

text: gut

text: healthy control


characteristic: INSDC center name

text: live

text: Human

text: ling yang

text: healthy control 24

text: China: Changzhou

text: fecal

text: Homo sapiens

text: biological replicate 95

text: male

text: gut

text: healthy control


characteristic: ID

text: VHIR

characteristic: INSDC first public

text: live

text: Metagenome or environmental

text: Spain:Lleida

text: mouse

characteristic: host

text: feces

text: 41.627167 N 0.612696 E

text: gut metagenome

text: Metagenome or environmental sample from gut metagenome


text: University of Vermont

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: USA: Maine

text: Ovis aries

text: milk

text: Staphylococcus aureus

text: pure bactieral culture

characteristic: strain

text: Microbe sample from Staphylococcus aureus


text: University of Vermont

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: USA: Maine

text: Bos taurus

text: milk

text: Staphylococcus aureus

text: pure bactieral culture


text: University of Vermont

text: live

text: Microbe, viral or environmental

text: USA: Maine

text: Capra hircus

characteristic: isolate

text: milk

text: Staphylococcus aureus

characteristic: organism

text: pure bactieral culture


text: Axon Regeneration and Degeneration, Department of Brain Sciences, DGIST

text: live

text: Generic

text: Cultured adult doral root ganglion neurons

characteristic: cell type

text: missing

text: adult

characteristic: developmental stage

characteristic: genotype

text: missing

characteristic: in vitro_viral_gene_delivery

characteristic: in vivo_viral_gene_delivery

text: Anti-HA tag(abcam, #ab9110)

characteristic: ip antibody

text: HA-IP product, RNA

characteristic: molecule subtype

text: Mus musculus

text: B6N.129-Rpl22tm1.1Psam/J x B6.129P2-Aviltm2(cre)Fawa/J

characteristic: tissue

text: Ribotag, shGpr151, DRG

text: Sciatic nerve injury, 24hr

characteristic: treatment


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: missing

text: adult

text: missing

text: AAV-control

text: Anti-HA tag(abcam, #ab9110)

text: HA-IP product, RNA

text: Mus musculus

text: Ribotag, control, DRG

characteristic: title

text: Sciatic nerve injury, 24hr


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: missing

text: adult

text: Wild type

text: missing

text: CSDE1-IP product, RNA

text: Mus musculus

characteristic: strain

text: 5'UTRm+shGpr151, DRG

text: Sciatic nerve injury, 72hr


text: live

text: Generic

text: Cultured primary dorsal root ganglion neurons

characteristic: cell type

text: missing

text: embryonic stage E13

characteristic: developmental stage

text: Wild type

characteristic: genotype

text: missing

characteristic: in vitro_viral_gene_delivery

text: CSDE1-IP product, RNA

text: Mus musculus

characteristic: organism

text: 5'UTRm, embryonic DRG


text: live

text: Generic

text: missing

text: embryonic stage E13

text: Wild type

text: missing

text: LV-control

characteristic: in vivo_viral_gene_delivery

characteristic: ip antibody

text: CSDE1-IP product, RNA

characteristic: molecule subtype

text: Mus musculus

characteristic: tissue

text: Control, embryonic DRG

characteristic: treatment


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: missing

text: adult

text: Wild type

text: missing

text: CSDE1-IP product, RNA

text: Mus musculus

text: Dorsal root ganglion(DRG)

text: Dorsal root ganglion(DRG)

text: shGpr151, DRG, Injured

text: Sciatic nerve injury, 72hr


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: missing

text: adult

text: Wild type

text: missing

text: CSDE1-IP product, RNA

text: Mus musculus

text: Dorsal root ganglion(DRG)

text: Dorsal root ganglion(DRG)

text: shGpr151, DRG, Uninjured

characteristic: title

text: Uninjury


text: live

text: Generic

characteristic: cell type

text: missing

text: adult

characteristic: developmental stage

text: Wild type

characteristic: genotype

text: missing

characteristic: in vitro_viral_gene_delivery

text: CSDE1-IP product, RNA

text: Mus musculus

text: Dorsal root ganglion(DRG)

characteristic: strain

text: Dorsal root ganglion(DRG)

text: Wildtype, DRG, Injured

text: Sciatic nerve injury, 72hr


text: live

text: Generic

text: missing

text: adult

text: Wild type

text: missing

characteristic: in vivo_viral_gene_delivery

characteristic: ip antibody

text: CSDE1-IP product, RNA

characteristic: molecule subtype

text: Mus musculus

characteristic: organism

text: Dorsal root ganglion(DRG)

text: Dorsal root ganglion(DRG)

characteristic: tissue

text: Wildtype, DRG, Uninjured

text: Uninjury


characteristic: External Id

text: NIH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: cell line

text: melanoma cells

text: missing

text: TBX3 knock-down

text: missing

text: Homo sapiens

text: TBX3 KD (DsiRNA 13.8), biol rep 3, 24h

characteristic: treatment


text: NIH

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: melanoma cells

text: missing

text: TBX3 knock-down

text: missing

text: Homo sapiens

text: TBX3 KD (DsiRNA 13.8), biol rep 2, 24h

characteristic: title


text: NIH

text: live

text: Generic

text: melanoma cells

characteristic: cell type

text: missing

text: TBX3 knock-down

characteristic: genotype

text: missing

text: Homo sapiens

text: TBX3 KD (DsiRNA 13.8), biol rep 1, 24h


text: NIH

text: live

text: Generic

text: melanoma cells

text: missing

text: TBX3 knock-down

text: missing

text: Homo sapiens

text: TBX3 KD (DsiRNA 13.6), biol rep 3, 24h


text: NIH

text: live

text: Generic

text: melanoma cells

text: missing

text: TBX3 knock-down

text: missing

text: Homo sapiens

text: TBX3 KD (DsiRNA 13.6), biol rep 2, 24h


text: NIH

text: live

text: Generic

text: melanoma cells

text: missing

text: TBX3 knock-down

text: missing

text: Homo sapiens

text: TBX3 KD (DsiRNA 13.6), biol rep 1, 24h


text: NIH

text: live

text: Generic

text: melanoma cells

text: missing

text: Control

text: missing

text: Homo sapiens

text: Control (NC1), biol rep 3, 24h


text: NIH

text: live

text: Generic

text: melanoma cells

text: missing

text: Control

text: missing

text: Homo sapiens

text: Control (NC1), biol rep 2, 24h


text: NIH

text: live

text: Generic

text: melanoma cells

text: missing

text: Control

text: missing

text: Homo sapiens

text: Control (NC1), biol rep 1, 24h


text: NIH

text: live

text: Generic

characteristic: age

text: missing

text: missing

text: Mus musculus

text: Skin

characteristic: strain

text: Skin

text: Nonagouti sample, scRNA-seq, pairs with Mc1rE


text: NIH

text: live

text: Generic

text: missing

text: missing

text: Mus musculus

characteristic: organism

text: Skin

text: Skin

characteristic: tissue

text: Recessive yellow sample Mc1rE, scRNA-seq, pairs with Nonagouti_RecessiveYellow


characteristic: External Id

text: NIH

characteristic: INSDC center name

text: live

text: Generic

text: missing

text: missing

text: Mus musculus

text: Skin

text: Skin

text: Nonagouti_LethalYellow sample, scRNA-seq, pairs with LethalYellow


text: NIH

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: missing

text: missing

text: Mus musculus

text: Skin

text: Skin

text: LethalYellow sample, scRNA-seq, pairs with Nonagouti_LethalYellow


Ctr

text: Tsinghua

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

characteristic: breed

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

characteristic: cultivar

text: not collected

text: not collected

text: single cell data of NK cells from non-treated mice

characteristic: description

text: not collected

text: not collected

characteristic: disease

text: not collected

text: not collected

characteristic: ecotype

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

characteristic: isolate

text: not collected

text: not collected

text: Mus musculus

text: not collected

characteristic: phenotype

text: not collected

text: not collected

characteristic: sex

text: not collected

text: not collected

text: not collected

text: not collected

text: NK cells

text: Model organism or animal sample from Mus musculus

characteristic: treatment


DR

text: Tsinghua

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: not collected

characteristic: age

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: single cell data of NK cells from DR-treated mice

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

characteristic: genotype

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: Mus musculus

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: NK cells

characteristic: title

text: DR


characteristic: External Id

text: Biosciences, Durham University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: cell line

text: Hepatocyte (Hepatocellular Carcinoma)

characteristic: cell type

text: missing

text: WT

text: missing

text: Homo sapiens

characteristic: organism

text: Liver

text: Liver

characteristic: tissue

text: HepG2 cells, 3D 8 days, Rep 4

text: 3D cultured


text: Biosciences, Durham University

text: live

text: Generic

text: Hepatocyte (Hepatocellular Carcinoma)

text: missing

text: WT

text: missing

text: Homo sapiens

text: Liver

text: Liver

text: HepG2 cells, 3D 8 days, Rep 3

text: 3D cultured

characteristic: treatment


text: Biosciences, Durham University

characteristic: INSDC secondary accession

text: live

text: Generic

text: Hepatocyte (Hepatocellular Carcinoma)

text: missing

text: WT

text: missing

text: Homo sapiens

text: Liver

text: Liver

text: HepG2 cells, 3D 8 days, Rep 2

text: 3D cultured


text: Biosciences, Durham University

text: live

characteristic: INSDC status

text: Generic

text: Hepatocyte (Hepatocellular Carcinoma)

text: missing

text: WT

text: missing

text: Homo sapiens

text: Liver

text: Liver

text: HepG2 cells, 3D 8 days, Rep 1

text: 3D cultured


text: Biosciences, Durham University

text: live

text: Generic

characteristic: NCBI submission model

text: Hepatocyte (Hepatocellular Carcinoma)

text: missing

text: WT

text: missing

text: Homo sapiens

text: Liver

text: Liver

text: HepG2 cells, 2D 8 days, Rep 4

text: 2D cultured


text: Biosciences, Durham University

text: live

text: Generic

characteristic: NCBI submission package

text: Hepatocyte (Hepatocellular Carcinoma)

text: missing

text: WT

text: missing

text: Homo sapiens

text: Liver

text: Liver

text: HepG2 cells, 2D 8 days, Rep 3

text: 2D cultured


text: Biosciences, Durham University

text: live

text: Generic

characteristic: SRA accession

text: Hepatocyte (Hepatocellular Carcinoma)

text: missing

text: WT

text: missing

text: Homo sapiens

text: Liver

text: Liver

text: HepG2 cells, 2D 8 days, Rep 2

text: 2D cultured


text: Biosciences, Durham University

text: live

text: Generic

text: Hepatocyte (Hepatocellular Carcinoma)

text: missing

text: WT

text: missing

text: Homo sapiens

text: Liver

text: Liver

text: HepG2 cells, 2D 8 days, Rep 1

text: 2D cultured


text: Icahn School of Medicine at Mount Sinai

text: live

text: Generic

text: mESC

text: missing

text: missing

text: Experiment C

characteristic: group

text: Mus musculus

text: mESC


text: Icahn School of Medicine at Mount Sinai

text: live

text: Generic

text: mESC

text: missing

text: missing

text: Experiment C

text: Mus musculus

text: mESC

text: siCtrl


text: Icahn School of Medicine at Mount Sinai

text: live

text: Generic

text: mESC

text: missing

text: missing

text: Experiment B

text: Mus musculus

text: mESC


text: Icahn School of Medicine at Mount Sinai

text: live

text: Generic

text: mESC

text: missing

text: missing

text: Experiment B

text: Mus musculus

text: mESC

text: siCtrl


text: Icahn School of Medicine at Mount Sinai

text: live

text: Generic

text: mESC

text: missing

text: missing

text: Experiment A

text: Mus musculus

text: mESC


text: Icahn School of Medicine at Mount Sinai

text: live

text: Generic

text: mESC

text: missing

text: missing

text: Experiment A

text: Mus musculus

text: mESC

text: siCtrl


text: Henan Agricultural University

text: live

text: Model organism or animal

characteristic: age

text: Arbor Acres broilers

characteristic: breed

text: missing

text: missing

characteristic: cultivar

text: missing

characteristic: ecotype

text: missing

text: Transcriptome sequencing after CKM interference in chicken primary myoblasts

characteristic: isolate

text: Gallus gallus

text: replicate = 1

characteristic: replicate

text: missing

characteristic: sex

text: missing

characteristic: strain

text: Leg muscles

text: Interference with CKM in chicken primary myoblasts1

characteristic: tmp


characteristic: External Id

text: Henan Agricultural University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Model organism or animal

text: Arbor Acres broilers

text: missing

text: missing

text: missing

text: missing

text: Gallus gallus

characteristic: organism

text: replicate = 2

text: missing

text: missing

text: Leg muscles

characteristic: tissue

text: Interference with CKM in chicken primary myoblasts2

characteristic: title


text: Henan Agricultural University

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Arbor Acres broilers

text: missing

text: missing

text: missing

text: missing

text: Gallus gallus

text: replicate = 3

text: missing

text: missing

text: Leg muscles

text: Interference with CKM in chicken primary myoblasts3


text: Henan Agricultural University

text: live

text: Model organism or animal

characteristic: age

text: Arbor Acres broilers

characteristic: breed

text: missing

text: missing

characteristic: cultivar

text: missing

characteristic: ecotype

text: missing

characteristic: isolate

text: Gallus gallus

text: replicate = 4

text: missing

text: missing

text: Leg muscles

text: Transfection of interference control in chicken primary myoblasts1


characteristic: External Id

text: Henan Agricultural University

text: live

text: Model organism or animal

text: Arbor Acres broilers

text: missing

text: missing

text: missing

text: missing

text: Gallus gallus

text: replicate = 5

characteristic: replicate

text: missing

characteristic: sex

text: missing

characteristic: strain

text: Leg muscles

text: Transfection of interference control in chicken primary myoblasts2

characteristic: tmp


text: Henan Agricultural University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Model organism or animal

text: Arbor Acres broilers

text: missing

text: missing

text: missing

text: missing

text: Gallus gallus

characteristic: organism

text: replicate = 6

text: missing

text: missing

text: Leg muscles

characteristic: tissue

text: Transfection of interference control in chicken primary myoblasts3


text: Icahn School of Medicine at Mount Sinai

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: mESC

characteristic: cell type

text: missing

text: missing

text: Mus musculus

text: mESC

characteristic: timepoint

characteristic: title


characteristic: External Id

text: University of Kentucky

text: live

text: Model organism or animal

characteristic: SRA accession

text: Thoroughbred

characteristic: breed

text: adult

text: USA:Kentucky

text: Equus caballus

text: female

text: blood

text: Model organism or animal sample from Equus caballus


text: University of Kentucky

text: live

text: Model organism or animal

text: Thoroughbred

text: adult

text: USA:Kentucky

text: Equus caballus

text: male

characteristic: sex

text: blood


text: Department of Hematology-Oncology, Foundation for Biomedical Research and Innovation at Kobe

text: live

text: Generic

text: MOLM13 parental cells

characteristic: cell line

text: hematopoietic cells (MOLM13 cells)

text: missing

text: missing

text: Homo sapiens

text: MOLM13 parental cells

text: 50nM dBRD9

characteristic: treatment


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: MOLM13 parental cells

text: hematopoietic cells (MOLM13 cells)

text: missing

text: missing

text: Homo sapiens

text: MOLM13 parental cells

text: DMSO


characteristic: INSDC last update

text: live

text: Generic

text: anti-CTCF (Millipore, 07-729)

characteristic: chip antibody

text: missing

text: CD45.2(+) Mx1-Cre Brd9fl/fl

characteristic: donor genotype

text: missing

text: Mus musculus

characteristic: organism

text: CD45.1(+) CD45.2(-)

characteristic: recipient genotype

text: Lineage- bone marrow cells in femora and tibiae

characteristic: strain

text: 5 months after pIpC injection

characteristic: timing of preparation


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: missing

text: CD45.2(+) Mx1-Cre Brd9fl/fl

text: missing

text: Mus musculus

text: CD45.1(+) CD45.2(-)

text: 5 months after pIpC injection


characteristic: External Id

text: live

text: Generic

characteristic: SRA accession

text: anti-CTCF (Millipore, 07-729)

text: missing

text: CD45.2(+) Brd9fl/fl

text: missing

text: Mus musculus

text: CD45.1(+) CD45.2(-)

text: 5 months after pIpC injection

characteristic: title


text: live

text: Generic

text: missing

text: CD45.2(+) Brd9fl/fl

text: missing

text: Mus musculus

text: CD45.1(+) CD45.2(-)

text: 5 months after pIpC injection


text: Bartelt, Institute for Cardiovascular Prevention, Klinikum der Universitaet Muenchen

text: live

text: Generic

text: human mesenchymal stem cells

characteristic: cell line

text: missing

text: missing

text: Homo sapiens

text: hMADS

text: hMADS

characteristic: tissue

text: AV AATBC

characteristic: treatment


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: human mesenchymal stem cells

text: missing

text: missing

text: Homo sapiens

text: hMADS

text: hMADS

text: AV GFP control


text: live

text: Generic

text: human mesenchymal stem cells

text: missing

text: missing

text: Homo sapiens

characteristic: organism

text: hMADS

text: hMADS

text: siRNA AATBC


text: live

text: Generic

text: human mesenchymal stem cells

text: missing

text: missing

text: Homo sapiens

text: hMADS

text: hMADS

text: siRNA scramble


text: Neuroscience and Physiology, SUNY Upstate Medical Univ

text: live

text: Generic

text: missing

text: WT

characteristic: genotype

text: missing

text: Mus musculus

text: Spinal Cord

text: Spinal Cord


text: live

text: Generic

text: missing

text: KI

text: missing

text: Mus musculus

text: Spinal Cord

text: Spinal Cord


text: live

text: Generic

text: missing

text: WT

text: missing

text: Mus musculus

text: Muscle

text: Muscle


text: live

text: Generic

text: missing

text: KI

text: missing

text: Mus musculus

text: Muscle

text: Muscle


text: live

text: Generic

text: missing

text: WT

text: missing

text: Mus musculus

text: Forebrain

text: Forebrain


text: live

text: Generic

text: missing

text: KI

text: missing

text: Mus musculus

text: Forebrain

text: Forebrain


text: live

text: Generic

text: missing

text: WT

text: missing

text: Mus musculus

text: Heart

text: Heart


text: live

text: Generic

text: missing

text: KI

text: missing

text: Mus musculus

text: Heart

text: Heart


text: live

text: Generic

text: missing

text: WT

text: missing

text: Mus musculus

text: Cerebellum

text: Cerebellum


text: live

text: Generic

text: missing

text: KI

text: missing

text: Mus musculus

text: Cerebellum

text: Cerebellum


Streptococcus agalactiae CJB111 WT

text: University of Colorado - AMC

text: live

text: Pathogen.cl

text: Carol J. Baker

text: WT

text: USA: Houston, Texas

text: Human (neonate)

characteristic: host

text: Late-onset sepsis

text: blood

text: Missing

text: Streptococcus agalactiae CJB111

text: V

characteristic: serotype

characteristic: strain

text: WT


Streptococcus agalactiae CJB111 dcm

text: University of Colorado - AMC

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

text: Haider S. Manzer

text: Not Applicable

text: dcm

characteristic: description

text: dcm

text: USA: Aurora, Colorado

text: Human (neonate)

text: Late-onset sepsis

text: Lab Mutant

text: Missing

text: Streptococcus agalactiae

text: V

text: CJB111 dcm

text: dcm


characteristic: External Id

text: BioMedical center

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Salt gradient dialysis (SGD) - in vitro reconstituted

characteristic: chromatin

text: missing

text: foldamer ratio: 1:8

characteristic: dna

text: missing

text: Drosophila melanogaster embryos

characteristic: histone type

text: WT ORC

characteristic: orc

text: Saccharomyces cerevisiae

text: WT INO91

characteristic: remodeler

text: genomic DNA plasmid pool


text: BioMedical center

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: SRA accession

text: missing

text: foldamer ratio: 1:8

text: missing

text: Drosophila melanogaster embryos

text: WT ORC

text: Saccharomyces cerevisiae

text: WT INO90

text: genomic DNA plasmid pool

characteristic: title


text: BioMedical center

text: live

text: Generic

text: missing

text: foldamer ratio: 1:4

text: missing

text: Drosophila melanogaster embryos

text: WT ORC

text: Saccharomyces cerevisiae

characteristic: organism

text: WT INO89

text: genomic DNA plasmid pool


text: BioMedical center

characteristic: INSDC secondary accession

text: live

text: Generic

text: missing

text: foldamer ratio: 1:4

text: missing

text: Drosophila melanogaster embryos

text: WT ORC

text: Saccharomyces cerevisiae

text: WT INO88

text: genomic DNA plasmid pool


text: BioMedical center

text: live

characteristic: INSDC status

text: Generic

text: missing

text: foldamer ratio: 1:2

text: missing

text: Drosophila melanogaster embryos

text: WT ORC

text: Saccharomyces cerevisiae

text: WT INO87

text: genomic DNA plasmid pool


text: BioMedical center

text: live

text: Generic

text: missing

text: foldamer ratio: 1:2

text: missing

text: Drosophila melanogaster embryos

text: WT ORC

text: Saccharomyces cerevisiae

text: WT INO86

text: genomic DNA plasmid pool


text: BioMedical center

text: live

text: Generic

text: missing

text: foldamer ratio: 1:1

text: missing

text: Drosophila melanogaster embryos

text: WT ORC

text: Saccharomyces cerevisiae

text: WT INO85

text: genomic DNA plasmid pool


text: BioMedical center

text: live

text: Generic

text: missing

text: foldamer ratio: 1:1

text: missing

text: Drosophila melanogaster embryos

text: WT ORC

text: Saccharomyces cerevisiae

text: WT INO84

text: genomic DNA plasmid pool


text: BioMedical center

text: live

text: Generic

text: missing

text: foldamer ratio: 1:0

text: missing

text: Drosophila melanogaster embryos

text: WT ORC

text: Saccharomyces cerevisiae

text: WT INO83

text: genomic DNA plasmid pool


text: BioMedical center

text: live

text: Generic

text: missing

text: foldamer ratio: 1:0

text: missing

text: Drosophila melanogaster embryos

text: WT ORC

text: Saccharomyces cerevisiae

text: WT INO82

text: genomic DNA plasmid pool


text: BioMedical center

text: live

text: Generic

text: missing

text: foldamer ratio: 1:0

text: missing

text: Drosophila melanogaster embryos

text: WT ORC

text: Saccharomyces cerevisiae

text: WT INO81

text: genomic DNA plasmid pool


text: BioMedical center

text: live

text: Generic

text: missing

text: foldamer ratio: 1:0

text: missing

text: Drosophila melanogaster embryos

text: WT ORC

text: Saccharomyces cerevisiae

text: WT INO80

text: genomic DNA plasmid pool


text: Biology and Biotechnologies Charles Darwin, Sapienza, University of Rome

text: live

text: Generic

text: missing

characteristic: genotype

text: missing

text: Mus musculus

text: Heart

text: Heart

characteristic: tissue

text: heart, Ft1sm22ko, 1 week, rep4


characteristic: External Id

text: live

text: Generic

characteristic: NCBI submission model

text: missing

text: missing

text: Mus musculus

text: Heart

text: Heart

text: heart, Ft1sm22ko, 1 week, rep3


text: live

text: Generic

characteristic: NCBI submission package

text: missing

text: missing

text: Mus musculus

text: Heart

text: Heart

text: heart, Ft1sm22ko, 1 week, rep2


text: live

text: Generic

text: missing

text: missing

text: Mus musculus

text: Heart

text: Heart

text: heart, Ft1sm22ko, 1 week, rep1


text: live

text: Generic

text: missing

text: missing

text: Mus musculus

text: Heart

text: Heart

text: heart, Ft1ko, 1 week, rep3


text: live

text: Generic

text: missing

text: missing

text: Mus musculus

text: Heart

text: Heart

text: heart, Ft1ko, 1 week, rep2


text: live

text: Generic

text: missing

text: missing

text: Mus musculus

text: Heart

text: Heart

text: heart, Ft1ko, 1 week, rep1


text: live

text: Generic

text: missing

text: WT

text: missing

text: Mus musculus

text: Heart

text: Heart

text: heart, WT, 1 week, rep3


text: live

text: Generic

text: missing

text: WT

text: missing

text: Mus musculus

text: Heart

text: Heart

text: heart, WT, 1 week, rep2


text: live

text: Generic

text: missing

text: WT

text: missing

text: Mus musculus

text: Heart

text: Heart

text: heart, WT, 1 week, rep1


text: Department of Molecular and Comparative Pathobiology, Johns Hopkins University School of Medicine

text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: Rnase R treated-Chronic infection with CNS pathology (CP+)-BH-4

characteristic: treatment


text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: Rnase R treated-Chronic infection with CNS pathology (CP+)-BH-2


text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: Rnase R treated-Chronic infection with CNS pathology (CP+)-BH-1


text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: Rnase R treated-Chronic infection without CNS pathology (CP-)-BH-7


text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: Rnase R treated-Chronic infection without CNS pathology (CP-)-BH-6


text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: Rnase R treated-Chronic infection without CNS pathology (CP-)-BH-5


text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: Rnase R treated-Chronic infection without CNS pathology (CP-)-BH-3


text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: Rnase R treated-Chronic infection without CNS pathology (CP-)-BH-2


text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: Rnase R treated-Chronic infection without CNS pathology (CP-)-BH-1


text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: Rnase R treated-Acue-BH-5

text: Rnase R treated-Acue-BH-5


text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: Rnase R treated-Acue-BH-4

text: Rnase R treated-Acue-BH-4


text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: Rnase R treated-Acue-BH-3

text: Rnase R treated-Acue-BH-3


text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: Rnase R treated-Acue-BH-2

text: Rnase R treated-Acue-BH-2


text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: Rnase R treated-Acue-BH-1

text: Rnase R treated-Acue-BH-1


text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: Rnase R treated-Uninfected-BH-5

text: Rnase R treated-Uninfected-BH-5


text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: Rnase R treated-Uninfected-BH-4

text: Rnase R treated-Uninfected-BH-4


text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: Rnase R treated-Uninfected-BH-3

text: Rnase R treated-Uninfected-BH-3


text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: Rnase R treated-Uninfected-BH-2

text: Rnase R treated-Uninfected-BH-2


text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: Rnase R treated-Uninfected-BH-1

text: Rnase R treated-Uninfected-BH-1


text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: Rnase R untreated-Chronic infection with CNS pathology (CP+)-BH-4


text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: Rnase R untreated-Chronic infection with CNS pathology (CP+)-BH-2


text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: Rnase R untreated-Chronic infection with CNS pathology (CP+)-BH-1


text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: Rnase R untreated-Chronic infection without CNS pathology (CP-)-BH-7


text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: Rnase R untreated-Chronic infection without CNS pathology (CP-)-BH-6


text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: Rnase R untreated-Chronic infection without CNS pathology (CP-)-BH-5


text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: Rnase R untreated-Chronic infection without CNS pathology (CP-)-BH-4


text: Department of Molecular and Comparative Pathobiology, Johns Hopkins University School of Medicine

text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: Rnase R untreated-Chronic infection without CNS pathology (CP-)-BH-3


text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: Rnase R untreated-Chronic infection without CNS pathology (CP-)-BH-1


text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: RnaseR untreated-Acue-BH-5

text: RnaseR untreated-Acue-BH-5


text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: RnaseR untreated-Acue-BH-4

text: RnaseR untreated-Acue-BH-4


text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: RnaseR untreated-Acue-BH-3

text: RnaseR untreated-Acue-BH-3


text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: RnaseR untreated-Acue-BH-2

text: RnaseR untreated-Acue-BH-2


text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: RnaseR untreated-Acue-BH-1

text: RnaseR untreated-Acue-BH-1


text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: Rnase R untreated-Uninfected-BH-5

text: Rnase R untreated-Uninfected-BH-5


text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: Rnase R untreated-Uninfected-BH-4

text: Rnase R untreated-Uninfected-BH-4


text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: Rnase R untreated-Uninfected-BH-3

text: Rnase R untreated-Uninfected-BH-3


text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: Rnase R untreated-Uninfected-BH-2

text: Rnase R untreated-Uninfected-BH-2


text: live

text: Generic

text: missing

text: missing

text: Macaca nemestrina

text: Brain

text: Brain

text: Rnase R untreated-Uninfected-BH-1

text: Rnase R untreated-Uninfected-BH-1


text: Chungbuk National University

text: live

text: Generic

characteristic: cell line

text: brain cancer (DIPG) cell line

characteristic: cell type

text: missing

text: missing

text: Homo sapiens

text: DMKG, 10nM


text: Chungbuk National University

text: live

text: Generic

text: brain cancer (DIPG) cell line

text: missing

text: missing

text: Homo sapiens


text: Verily Life Sciences Wastewater Lab

text: live

text: SARS-CoV-2: wastewater surveillance

text: dewatering of solids

text: BCoV

text: Chemagic Viral DNA/RNA 300 and Zymo OneStep PCR Inhibitor Removal kit

text: USA: California

text: wastewater

text: wastewater metagenome

text: public health surveillance community-level

text: Verily Life Sciences

text: SARS-CoV-2: wastewater surveillance sample from wastewater metagenome

text: primary sludge

text: wastewater treatment plant

text: grab

text: gene copies/gram dry weight

text: N gene

text: yes


text: Deparment Computational Biology, Helmholtz-Centre for Environmental Research - UFZ

text: live

text: Generic

text: missing

text: missing

text: Homo sapiens

text: Human retinal organoid cells

text: Human retinal organoid cells

text: untreated


text: Chinese Academy of Fishery Sciences

text: live

text: Model organism or animal

text: 1 year

characteristic: age

text: CAFS

text: China: WuDu fishery, cafs, beijing

text: Cyprinus carpio

characteristic: replicate

text: female

characteristic: sex

text: Cyprinus carpio Songpu mirror

characteristic: strain

text: muscle

text: Muscle of Common carp, replicate 1


text: Chinese Academy of Fishery Sciences

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Model organism or animal

characteristic: SRA accession

text: 1 year

text: CAFS

text: China: WuDu fishery, cafs, beijing

text: Cyprinus carpio

text: female

text: Cyprinus carpio Songpu mirror

text: muscle

text: Muscle of Common carp, replicate 2


text: Chinese Academy of Fishery Sciences

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Model organism or animal

text: 1 year

text: CAFS

text: China: WuDu fishery, cafs, beijing

text: Cyprinus carpio

characteristic: organism

text: female

text: Cyprinus carpio Songpu mirror

text: muscle

text: Muscle of Common carp, replicate 3

characteristic: title


characteristic: External Id

text: Chinese Academy of Fishery Sciences

text: live

text: Model organism or animal

characteristic: NCBI submission model

text: 1 year

text: CAFS

text: China: WuDu fishery, cafs, beijing

text: Cyprinus carpio

text: female

text: Cyprinus carpio Songpu mirror

text: liver

characteristic: tissue

text: Liver of Common carp, replicate 1


text: Chinese Academy of Fishery Sciences

text: live

text: Model organism or animal

characteristic: NCBI submission package

text: 1 year

text: CAFS

text: China: WuDu fishery, cafs, beijing

text: Cyprinus carpio

text: female

text: Cyprinus carpio Songpu mirror

text: liver

text: Liver of Common carp, replicate 2


text: Chinese Academy of Fishery Sciences

text: live

text: Model organism or animal

text: 1 year

text: CAFS

text: China: WuDu fishery, cafs, beijing

text: Cyprinus carpio

text: female

text: Cyprinus carpio Songpu mirror

text: liver

text: Liver of Common carp, replicate 3


text: INSERM

text: live

text: Generic

text: missing

text: missing

text: Homo sapiens

text: hiPSC-derived cardiac fibroblasts

text: hiPSC-derived cardiac fibroblasts

text: Cardiac Fibroblast, DMD 4

text: DMD

characteristic: treatment


text: INSERM

text: live

text: Generic

text: missing

text: missing

text: Homo sapiens

text: hiPSC-derived cardiac fibroblasts

text: hiPSC-derived cardiac fibroblasts

text: Cardiac Fibroblast, DMD 3

text: DMD


text: INSERM

text: live

text: Generic

text: missing

text: missing

text: Homo sapiens

text: hiPSC-derived cardiac fibroblasts

text: hiPSC-derived cardiac fibroblasts

text: Cardiac Fibroblast, DMD 2

text: DMD


text: INSERM

text: live

text: Generic

text: missing

text: missing

text: Homo sapiens

text: hiPSC-derived cardiac fibroblasts

text: hiPSC-derived cardiac fibroblasts

text: Cardiac Fibroblast, DMD 1

text: DMD


text: INSERM

text: live

text: Generic

text: missing

text: missing

text: Homo sapiens

text: hiPSC-derived cardiac fibroblasts

text: hiPSC-derived cardiac fibroblasts

text: Cardiac Fibroblast, Control 4

text: Healthy


text: INSERM

text: live

text: Generic

text: missing

text: missing

text: Homo sapiens

text: hiPSC-derived cardiac fibroblasts

text: hiPSC-derived cardiac fibroblasts

text: Cardiac Fibroblast, Control 3

text: Healthy


text: INSERM

text: live

text: Generic

text: missing

text: missing

text: Homo sapiens

text: hiPSC-derived cardiac fibroblasts

text: hiPSC-derived cardiac fibroblasts

text: Cardiac Fibroblast, Control 2

text: Healthy


text: INSERM

text: live

text: Generic

text: missing

text: missing

text: Homo sapiens

text: hiPSC-derived cardiac fibroblasts

text: hiPSC-derived cardiac fibroblasts

text: Cardiac Fibroblast, Control 1

text: Healthy


gut metagenome

text: Affiliated Hospital of Guizhou Medical University

text: live

text: Model organism or animal

text: over 6 months

characteristic: age

text: 60 SD rats were randomly divided into 5 groups, including control group, lithium-pilocarpine chronic epilepsy model group, levetiracetam(150mg/kg) group, levetiracetam(150mg/kg) combined with sodium oligomannate(25mg/kg) group, levetiracetam(150mg/kg) combined with sodium oligomannate(50mg/kg) intervention group. After the model was successfully established, the rats in each group were evaluated for cognitive behavioral baseline by Y maze. After the baseline evaluation, treatment were given for 3 months, while the control group and the model group reeived the same volume of normal saline. After 3 months, seizures in each group were monitored by video. The Morris water maze test was used to evaluate the cognitive function, and the light-dark box test, the forced swimming test and the tail suspension test were used to evaluate the emotion of rats. Rat feces were analyzed by 16S rRNA sequencing. The blood routine, liver and kidney function in each group were detected.

characteristic: description

text: China:GuiZhou

text: gut metagenome

text: male

text: intestinal flora

text: not provided

text: Model organism or animal sample from gut metagenome


Phyllanthus emblica L. Bintan

text: Guangdong Academy of Agricultural Sciences

text: live

text: Plant

text: Bingtian

characteristic: cultivar

text: mature

text: Bingtian

characteristic: ecotype

text: China: Huizhou

text: Bingtian

characteristic: isolate

text: Emblica officinalis

text: leaf

text: Plant sample from Phyllanthus emblica


text: BSRB 346, Department of Pathology and Laboratory Medicine, UCLA

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: male

characteristic: Sex

text: fibroblast

characteristic: cell type

text: missing

text: Control

characteristic: disease state

text: missing

text: Homo sapiens

text: fibroblast cells,Control

text: Control_12 [MGD1546F RNA-seq]


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: SRA accession

text: male

text: fibroblast

text: missing

text: Control

text: missing

text: Homo sapiens

characteristic: organism

text: fibroblast cells,Control

text: Control_11 [GM00323 RNA-seq]


characteristic: External Id

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: female

text: fibroblast

text: missing

text: Control

text: missing

text: Homo sapiens

text: fibroblast cells,Control

text: Control_10 [MGD1558F RNA-seq]

characteristic: title


text: live

text: Generic

text: female

characteristic: age

text: fibroblast

text: missing

text: Control

text: missing

text: Homo sapiens

text: fibroblast cells,Control

text: Control_9 [GM01651G RNA-seq]


text: live

text: Generic

text: female

text: fibroblast

text: missing

text: Control

text: missing

text: Homo sapiens

text: fibroblast cells,Control

text: Control_8 [MGD1548F RNA-seq]


text: live

text: Generic

text: female

text: fibroblast

text: missing

text: Control

text: missing

text: Homo sapiens

text: fibroblast cells,Control

text: Control_6 [MGD1551 RNA-seq]


text: live

text: Generic

text: female

text: fibroblast

text: missing

text: Control

text: missing

text: Homo sapiens

text: fibroblast cells,Control

text: Control_5 [ZKW1511 RNA-seq]


text: live

text: Generic

text: female

text: fibroblast

text: missing

text: Control

text: missing

text: Homo sapiens

text: fibroblast cells,Control

text: Control_1 [ZKW1743 RNA-seq]


text: live

text: Generic

text: male

text: fibroblast

text: missing

text: missing

text: Homo sapiens

text: fibroblast cells,KAT6A

text: KAT6A_MGD1360 [RNA-seq]


text: live

text: Generic

text: male

text: fibroblast

text: missing

text: missing

text: Homo sapiens

text: fibroblast cells,KAT6A

text: KAT6A_MGD1618 [RNA-seq]


text: live

text: Generic

text: male

text: fibroblast

text: missing

text: missing

text: Homo sapiens

text: fibroblast cells,KAT6A

text: KAT6A_MGD1191 [RNA-seq]


text: live

text: Generic

text: male

text: fibroblast

text: missing

text: missing

text: Homo sapiens

text: fibroblast cells,KAT6A

text: KAT6A_MGD1149 [RNA-seq]


text: live

text: Generic

text: female

text: fibroblast

text: missing

text: missing

text: Homo sapiens

text: fibroblast cells,KAT6A

text: KAT6A_MGD1135 [RNA-seq]


text: live

text: Generic

text: female

text: fibroblast

text: missing

text: missing

text: Homo sapiens

text: fibroblast cells,KAT6A

text: KAT6A_MGD1105 [RNA-seq]


text: live

text: Generic

text: male

text: fibroblast

text: missing

text: missing

text: Homo sapiens

text: fibroblast cells,KAT6A

text: KAT6A_MGD1094 [RNA-seq]


text: live

text: Generic

text: male

text: fibroblast

text: missing

text: Control

text: missing

text: Homo sapiens

text: fibroblast cells,Control

text: Control_13 [MGD1549 ATAC-seq]


text: live

text: Generic

text: male

text: fibroblast

text: missing

text: Control

text: missing

text: Homo sapiens

text: fibroblast cells,Control

text: Control_11 [GM00323 ATAC-seq]


text: live

text: Generic

text: female

text: fibroblast

text: missing

text: Control

text: missing

text: Homo sapiens

text: fibroblast cells,Control

text: Control_9 [GM01651 ATAC-seq]


text: live

text: Generic

text: female

text: fibroblast

text: missing

text: Control

text: missing

text: Homo sapiens

text: fibroblast cells,Control

text: Control_6 [MGD_1551 ATAC-seq]


text: live

text: Generic

text: female

text: fibroblast

text: missing

text: Control

text: missing

text: Homo sapiens

text: fibroblast cells,Control

text: Control_5 [ZKW-17-1511 ATAC-seq]


text: live

text: Generic

text: male

text: fibroblast

text: missing

text: Control

text: missing

text: Homo sapiens

text: fibroblast cells,Control

text: Control_4 [ZKW-17-1510 ATAC-seq]


text: live

text: Generic

text: female

text: fibroblast

text: missing

text: Control

text: missing

text: Homo sapiens

text: fibroblast cells,Control

text: Control_3 [ZKW-17-2345 ATAC-seq]


text: live

text: Generic

text: male

text: fibroblast

text: missing

text: Control

text: missing

text: Homo sapiens

text: fibroblast cells,Control

text: Control_2 [ZKW-17-2343 ATAC-seq]


text: live

text: Generic

text: female

text: fibroblast

text: missing

text: Control

text: missing

text: Homo sapiens

text: fibroblast cells,Control

text: Control_1 [ZKW-17-1743 ATAC-seq]


text: live

text: Generic

text: male

text: fibroblast

text: missing

text: missing

text: Homo sapiens

text: fibroblast cells,KAT6A

text: KAT6A_MGD1360 [MGD1360 ATAC-seq]


text: live

text: Generic

text: male

text: fibroblast

text: missing

text: missing

text: Homo sapiens

text: fibroblast cells,KAT6A

text: KAT6A_MGD1618 [MGD_1618 ATAC-seq]


text: live

text: Generic

text: male

text: fibroblast

text: missing

text: missing

text: Homo sapiens

text: fibroblast cells,KAT6A

text: KAT6A_MGD1191 [MGD1191 ATAC-seq]


text: live

text: Generic

text: male

text: fibroblast

text: missing

text: missing

text: Homo sapiens

text: fibroblast cells,KAT6A

text: KAT6A_MGD1149 [MGD_1149 ATAC-seq]


text: live

text: Generic

text: female

text: fibroblast

text: missing

text: missing

text: Homo sapiens

text: fibroblast cells,KAT6A

text: KAT6A_MGD1135 [MGD1135 ATAC-seq]


text: live

text: Generic

text: female

text: fibroblast

text: missing

text: missing

text: Homo sapiens

text: fibroblast cells,KAT6A

text: KAT6A_MGD1105 [MGD1105 ATAC-seq]


text: live

text: Generic

text: male

text: fibroblast

text: missing

text: missing

text: Homo sapiens

text: fibroblast cells,KAT6A

text: KAT6A_MGD1094 [MGD_1094 ATAC-seq]


HF

text: Beijing University of Civil Engineering and Architecture

text: live

text: Metagenome or environmental

text: missing

text: missing

characteristic: host

text: not collected

text: wetland metagenome

text: Metagenome or environmental sample from wetland metagenome


MF

text: live

text: Metagenome or environmental

text: missing

text: missing

text: not collected

text: wetland metagenome


D

text: live

text: Metagenome or environmental

text: missing

text: missing

text: not collected

text: wetland metagenome


text: live

text: Generic

text: female

text: fibroblast

text: missing

text: Control

text: missing

text: Homo sapiens

text: fibroblast cells,Control


text: live

text: Generic

text: male

text: fibroblast

text: missing

text: missing

text: Homo sapiens

text: fibroblast cells,KAT6A


text: live

text: Generic

text: female

text: fibroblast

text: missing

text: missing

text: Homo sapiens

text: fibroblast cells,KAT6A


text: live

text: Generic

text: female

text: fibroblast

text: H3K9ac (Cell signaling #9649)

characteristic: chip antibody

text: missing

text: Control

text: missing

text: Homo sapiens

text: fibroblast cells,Control


characteristic: INSDC center name

text: live

text: Generic

text: male

text: fibroblast

text: H3K9ac (Cell signaling #9649)

text: missing

text: missing

text: Homo sapiens

text: fibroblast cells,KAT6A


characteristic: INSDC first public

text: live

text: Generic

text: female

text: fibroblast

text: H3K9ac (Cell signaling #9649)

text: missing

text: missing

text: Homo sapiens

text: fibroblast cells,KAT6A


text: live

text: Generic

text: female

characteristic: Sex

text: fibroblast

text: H3K23ac (AbCam #ab177275)

text: missing

text: Control

text: missing

text: Homo sapiens

text: fibroblast cells,Control


text: live

text: Generic

text: male

text: fibroblast

characteristic: cell type

text: H3K23ac (AbCam #ab177275)

text: missing

text: missing

text: Homo sapiens

text: fibroblast cells,KAT6A


text: live

text: Generic

text: female

text: fibroblast

text: H3K23ac (AbCam #ab177275)

text: missing

characteristic: disease state

text: missing

text: Homo sapiens

text: fibroblast cells,KAT6A


Col-0 RNA-seq

text: Guangxi University

characteristic: INSDC last update

text: live

text: Plant

text: not collected

text: not collected

characteristic: cultivar

text: not collected

text: Columbia

characteristic: ecotype

text: China: NanNing

text: not collected

characteristic: isolate

text: Arabidopsis thaliana

text: replicate = biological replicate 1

characteristic: replicate

text: seedlings

characteristic: tissue

text: Plant sample from Arabidopsis thaliana


PvoLEC2 #1-2 RNA-seq

characteristic: External Id

text: Guangxi University

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Plant

characteristic: NCBI submission model

characteristic: SRA accession

text: not collected

text: not collected

text: not collected

text: Columbia

text: China: NanNing

text: not collected

text: Arabidopsis thaliana

characteristic: organism

text: replicate = biological replicate 2

text: seedlings

text: Plant sample from Arabidopsis thaliana


text: China Agricultural University

characteristic: INSDC center name

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: China:Beijing

text: mouse

characteristic: host

text: mouth

text: not collected

text: mouse metagenome

text: Metagenome or environmental sample from mouse metagenome

characteristic: title


text: UC Davis

characteristic: INSDC first public

text: live

text: Invertebrate

text: 2 days after eclosion

characteristic: age

text: adult

text: Ral 517

text: Drosophila melanogaster

text: male

characteristic: sex

text: Accessory Gland

text: Invertebrate sample from Drosophila melanogaster


text: UC Davis

characteristic: INSDC last update

text: live

text: Invertebrate

text: 2 days after eclosion

text: adult

text: Drosophila simulans

text: male

text: Accessory Gland

text: Invertebrate sample from Drosophila simulans


name: Fusarium graminearum Fgbzip007 FLAG ChIP-seq

text: Seoul National University

text: live

text: Microbe, viral or environmental

text: We conducted ChIP-seq using FLAG-tagged Fgbzip007. Under sulfur limitation conditions, the mycelia were cultured for 4 hours, and harvested mycelia was used for further steps for ChIP analysis.

characteristic: description

text: South Korea

text: Wheat

text: Fusarium graminearum

text: mycelia

characteristic: strain

text: Fusarium graminearum Fgbzip007 ChIP-seq


text: South China University of Technology

text: live

text: Metagenome or environmental

text: China: Yunnan

text: tobacco

text: not-collect

text: 21.8 N 97.31 E

text: tobacco metagenome

text: replicate = biological replicate 1

characteristic: replicate

text: Metagenome or environmental sample from tobacco metagenome


characteristic: External Id

text: South China University of Technology

text: live

text: Metagenome or environmental

text: China: Yunnan

text: tobacco

text: not-collect

text: 21.9 N 97.31 E

text: tobacco metagenome

text: replicate = biological replicate 2


text: South China University of Technology

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

text: China: Yunnan

text: tobacco

text: not-collect

text: 21.10 N 97.31 E

text: tobacco metagenome

text: replicate = biological replicate 3


text: South China University of Technology

text: live

characteristic: INSDC status

text: Metagenome or environmental

text: China: Yunnan

text: tobacco

text: not-collect

text: 21.11 N 97.31 E

text: tobacco metagenome

text: replicate = biological replicate 1


text: South China University of Technology

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

text: China: Yunnan

text: tobacco

text: not-collect

text: 21.12 N 97.31 E

text: tobacco metagenome

text: replicate = biological replicate 2


text: South China University of Technology

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: China: Yunnan

text: tobacco

text: not-collect

text: 21.13 N 97.31 E

text: tobacco metagenome

text: replicate = biological replicate 3


text: Uppsala University

text: live

text: Model organism or animal

text: Adult

text: Australia

characteristic: isolate

text: Hemiscyllium ocellatum

characteristic: organism

text: female

text: Blood

characteristic: tissue

text: Model organism or animal sample from Hemiscyllium ocellatum


text: Uppsala University

characteristic: INSDC center name

text: live

text: Model organism or animal

characteristic: NCBI submission package

text: Adult

text: Australia

text: Hemiscyllium ocellatum

text: male

text: Blood


text: Institute of Zoology, Chinese Academy of Sciences

characteristic: INSDC first public

text: live

text: Invertebrate

text: China: Beijing

text: Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Protostomia; Ecdysozoa; Panarthropoda; Arthropoda; Chelicerata; Arachnida; Araneae; Mygalomorphae; Atypidae; Atypus

text: not collected

text: Atypus karschi

text: female

text: brain

text: Invertebrate sample from Atypus karschi

characteristic: title


text: live

text: Invertebrate

text: China: Beijing

text: Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Protostomia; Ecdysozoa; Panarthropoda; Arthropoda; Chelicerata; Arachnida; Araneae; Mesothelae

text: not collected

text: Luthela sp. 2 MW-2023a

text: female

characteristic: sex

text: brain

text: Invertebrate sample from Luthela sp. 2 MW-2023a


text: State University of Ceara

characteristic: INSDC last update

text: live

characteristic: Instrument

text: PAIRED

characteristic: LibraryLayout

text: SARS-CoV-2: clinical or host-associated

text: ILLUMINA

characteristic: Platform

text: Replicate 1

characteristic: Replicate

text: State University of Ceara

text: Brazil: Ceara

text: Calu-3 cells

characteristic: host

text: Control

text: Calu-3 cells - uninfected after 24 h of treatment

text: Calu-3 cells - uninfected

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


characteristic: External Id

text: State University of Ceara

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: PAIRED

text: SARS-CoV-2: clinical or host-associated

text: ILLUMINA

text: Replicate 2

text: State University of Ceara

text: Brazil: Ceara

text: Calu-3 cells

text: Control

text: Calu-3 cells - uninfected

text: Severe acute respiratory syndrome coronavirus 2


text: State University of Ceara

text: live

text: PAIRED

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: ILLUMINA

text: Replicate 3

characteristic: SRA accession

text: State University of Ceara

text: Brazil: Ceara

text: Calu-3 cells

text: Control

characteristic: isolate

text: Calu-3 cells - uninfected


text: State University of Ceara

characteristic: INSDC center name

text: live

text: PAIRED

text: SARS-CoV-2: clinical or host-associated

text: ILLUMINA

text: Replicate 4

text: State University of Ceara

text: Brazil: Ceara

text: Calu-3 cells

text: Control

text: Calu-3 cells - uninfected

characteristic: organism


text: State University of Ceara

characteristic: INSDC first public

text: live

text: PAIRED

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: ILLUMINA

text: Replicate 5

text: State University of Ceara

text: Brazil: Ceara

text: Calu-3 cells

text: Control

text: Calu-3 cells - uninfected


text: State University of Ceara

text: live

text: PAIRED

text: SARS-CoV-2: clinical or host-associated

text: ILLUMINA

text: Replicate 1

text: State University of Ceara

text: Brazil: Ceara

text: Calu-3 cells

text: Calu-3 cells - infected with SARS-CoV-2 (0.5 MOI) after 24 h of treatment

characteristic: title


text: State University of Ceara

characteristic: INSDC last update

text: live

text: PAIRED

text: SARS-CoV-2: clinical or host-associated

text: ILLUMINA

text: Replicate 2

text: State University of Ceara

text: Brazil: Ceara

text: Calu-3 cells

text: Calu-3 cells - infected with SARS-CoV-2 (0.5 MOI)


text: State University of Ceara

text: live

characteristic: Instrument

text: PAIRED

text: SARS-CoV-2: clinical or host-associated

text: ILLUMINA

text: Replicate 3

text: State University of Ceara

text: Brazil: Ceara

text: Calu-3 cells


text: State University of Ceara

text: live

text: PAIRED

characteristic: LibraryLayout

text: SARS-CoV-2: clinical or host-associated

text: ILLUMINA

text: Replicate 4

text: State University of Ceara

text: Brazil: Ceara

text: Calu-3 cells


text: State University of Ceara

text: live

text: PAIRED

text: SARS-CoV-2: clinical or host-associated

text: ILLUMINA

characteristic: Platform

text: Replicate 5

text: State University of Ceara

text: Brazil: Ceara

text: Calu-3 cells


text: Urban Lendahl, CMB, Karolinska Institutet

text: live

text: Generic

text: missing

text: Notch3 -/- (N3 KO)

characteristic: genotype

text: missing

text: Mus musculus

text: heart

characteristic: strain

characteristic: technical replicate

text: heart

characteristic: tissue


characteristic: External Id

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: missing

text: Notch3 +/+ (WT)

text: missing

text: Mus musculus

text: heart

text: heart


text: Dartmouth College

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: SRA accession

text: USA: New Hampshire

text: Homo sapiens

characteristic: host

text: descending colon aspirate

text: Phocaeicola sp. GP0067

text: cell culture

text: Microbe sample from Phocaeicola sp. GP0067


text: Lab of axon regeneration and degeneration, Brain Sciences, DGIST

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: missing

text: adult

characteristic: developmental stage

text: missing

text: Anti-HA tag(abcam, #ab9110)

characteristic: ip antibody

text: Mus musculus

characteristic: organism

text: Dorsal root ganglion(DRG)

text: B6N.129-Rpl22tm1.1Psam/J x B6.129P2-Aviltm2(cre)Fawa/J

text: Dorsal root ganglion(DRG)

text: RiboTag, DRG, Injured

text: Sciatic nerve injury, 72hr

characteristic: treatment


characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission package

text: missing

text: adult

text: missing

text: Anti-HA tag(abcam, #ab9110)

text: Mus musculus

text: Dorsal root ganglion(DRG)

text: Dorsal root ganglion(DRG)

text: RiboTag, DRG, Uninjured

characteristic: title

text: Uninjury


text: live

text: Generic

text: missing

text: adult

text: Wild type

characteristic: genotype

text: missing

text: Mus musculus

text: Dorsal root ganglion(DRG)

characteristic: strain

text: Dorsal root ganglion(DRG)

text: Bulk, DRG, Injured

text: Sciatic nerve injury, 72hr


characteristic: External Id

text: live

text: Generic

text: missing

text: adult

text: Wild type

text: missing

text: Mus musculus

text: Dorsal root ganglion(DRG)

text: Dorsal root ganglion(DRG)

characteristic: tissue

text: Bulk, DRG, Uninjured

text: Uninjury


text: Jan-Michael Peters' Lab, IMP - Research Institute of Molecular Pathology

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: pronuclei generated by incubating de-membranated Xenopus laevis sperm in Xenopus egg extract

characteristic: cell type

text: missing

text: missing

text: Xenopus laevis

text: Frog pronuclei 140min biol. rep. 2

text: incubation in egg extract for 140 min


text: live

text: Generic

characteristic: NCBI submission model

characteristic: SRA accession

text: missing

text: missing

text: Xenopus laevis

text: Frog pronuclei 140min biol. rep. 1

text: incubation in egg extract for 140 min


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: missing

text: missing

text: Xenopus laevis

text: Frog pronuclei 60min biol. rep. 2

text: incubation in egg extract for 60 min


text: live

text: Generic

text: missing

text: missing

text: Xenopus laevis

text: Frog pronuclei 60min biol. rep. 1

text: incubation in egg extract for 60 min


text: live

text: Generic

text: Xenopus laevis sperm

text: missing

text: missing

text: Xenopus laevis

text: Xenopus laevis sperm isolated from testes by density gradient centrifugation (DGC)

text: Frog sperm de-membranated biol. rep. 2

text: de-membranation


text: live

text: Generic

text: Xenopus laevis sperm

text: missing

text: missing

text: Xenopus laevis

text: Frog sperm de-membranated biol. rep. 1

text: de-membranation


text: live

text: Generic

text: Xenopus laevis sperm

text: missing

text: missing

text: Xenopus laevis

text: Frog sperm biol. rep. 2


text: live

text: Generic

text: Xenopus laevis sperm

text: missing

text: missing

text: Xenopus laevis

text: Frog sperm biol. rep. 1


text: live

text: Generic

text: mouse sperm

text: missing

text: missing

text: Mus musculus

text: mouse sperm isolated from cauda epididymides by swim-up

text: Mouse sperm swim-up


text: live

text: Generic

text: human sperm

text: missing

text: missing

text: Homo sapiens

text: human sperm isolated from ejaculate by discontinuous density gradient centrifugation (DGC)

text: Human sperm DGC biol. rep. 4


text: live

text: Generic

text: human sperm

text: missing

text: missing

text: Homo sapiens

text: Human sperm DGC biol. rep. 2


text: live

text: Generic

characteristic: cell line

text: immortalized non-epidermal epithelial cell line

text: missing

text: missing

text: Xenopus laevis

text: Frog XL177 biol. rep. 2


text: live

text: Generic

text: missing

text: missing

text: Xenopus laevis

characteristic: organism

text: Frog XL177 biol. rep. 1


text: live

text: Generic

text: missing

text: missing

text: Xenopus laevis

text: Frog pronuclei 140min +CTCF replicate 2

text: incubation in egg extract for 140 min and addition of recombinant CTCF protein

characteristic: treatment


characteristic: INSDC last update

text: live

text: Generic

text: missing

text: missing

text: Xenopus laevis

text: Frog pronuclei 140min +CTCF replicate 1


text: live

text: Generic

characteristic: NCBI submission package

text: human sperm

text: missing

text: missing

text: Homo sapiens

text: human sperm isolated from ejaculate by swim-up

text: Human sperm swim-up replicate 2


text: live

text: Generic

text: human sperm

text: missing

text: missing

text: Homo sapiens

text: Human sperm swim-up replicate 1

characteristic: title


text: live

text: Generic

text: nuclei isolated from Xenopus laevis XL177 cells, an immortalized non-epidermal epithelial cell line

text: missing

text: missing

text: Xenopus laevis

text: Frog XL177 nuclei PBS-crosslinking

text: crosslinking in buffer (PBS)


text: live

text: Generic

text: missing

text: missing

text: Xenopus laevis

text: Frog XL177 nuclei ULSS-crosslinking replicate 1

text: crosslinking in Xenopus egg extract (ULSS)


text: Chuan-Yuan Li, Duke University

text: live

text: Generic

text: glioblastoma, adherent epithelial cells

text: missing

text: COMT-knockout

characteristic: genotype

text: missing

text: Homo sapiens

text: brain tumor cell line

text: brain tumor cell line


text: Chuan-Yuan Li, Duke University

text: live

text: Generic

text: glioblastoma, adherent epithelial cells

text: missing

text: Lenti-CRISPR vector control

text: missing

text: Homo sapiens

text: brain tumor cell line

text: brain tumor cell line


text: live

text: Generic

text: anti-Smc3 (Bethyl, A300-060A)

characteristic: antibody

text: missing

text: missing

text: Xenopus laevis

text: XL177, Smc3 ChIP-Seq


characteristic: External Id

text: live

text: Generic

text: anti-Smc3 (Bethyl, A300-060A)

text: pronuclei generated by incubating de-membranated Xenopus laevis sperm in Xenopus egg extract for 140 min, with addition of recombinant CTCF protein

text: missing

text: missing

text: Xenopus laevis

text: Pronuclei 140min, +50nM CTCF, Smc3 ChIP-Seq


text: live

text: Generic

text: anti-Smc3 (Bethyl, A300-060A)

text: missing

text: missing

text: Xenopus laevis

text: Pronuclei 140min, +123nM CTCF, Smc3 ChIP-Seq


text: live

text: Generic

text: anti-Smc3 (Bethyl, A300-060A)

text: pronuclei generated by incubating de-membranated Xenopus laevis sperm in Xenopus egg extract for 140 min

text: missing

text: missing

text: Xenopus laevis

text: Pronuclei 140min, Smc3 ChIP-Seq


text: live

text: Generic

text: anti-Smc3 (Bethyl, A300-060A)

text: mouse embryonic fibroblasts

text: missing

text: missing

text: Mus musculus

text: mouse embryonic fibroblasts

text: mouse embryonic fibroblasts, Smc3 ChIP-Seq, replicate 3


text: live

text: Generic

text: anti-Smc3 (Bethyl, A300-060A)

text: mouse embryonic fibroblasts

text: missing

text: missing

text: Mus musculus

text: mouse embryonic fibroblasts

text: mouse embryonic fibroblasts, Smc3 ChIP-Seq, replicate 2


text: Jan-Michael Peters' Lab, IMP - Research Institute of Molecular Pathology

text: live

text: Generic

text: anti-Smc3 (Bethyl, A300-060A)

text: mouse embryonic fibroblasts

text: missing

text: missing

text: Mus musculus

text: mouse embryonic fibroblasts

text: mouse embryonic fibroblasts, Smc3 ChIP-Seq, replicate 1


text: live

text: Generic

text: anti-CTCF (Millipore, 07-729)

text: missing

text: missing

text: Xenopus laevis

text: Pronuclei 140min, +50nM CTCF, CTCF ChIP-Seq


text: live

text: Generic

text: anti-CTCF (Millipore, 07-729)

text: missing

text: missing

text: Xenopus laevis

text: Pronuclei 140min, +123nM CTCF, CTCF ChIP-Seq


text: MSA University

text: live

text: Pathogen.cl

text: MSA University

text: missing

text: Egypt

text: Homo sapiens

characteristic: host

text: Acne

text: skin

text: Missing

text: Staphylococcus warneri

characteristic: strain

text: Sample 29


text: MSA University

text: live

characteristic: INSDC status

text: Pathogen.cl

text: MSA University

text: missing

text: Egypt

text: Homo sapiens

text: Acne

text: skin

text: Missing

text: Staphylococcus epidermidis

text: Sample 36


text: MSA University

text: live

text: Pathogen.cl

text: MSA University

text: missing

text: Egypt

text: Homo sapiens

text: Acne

text: skin

text: Missing

text: Staphylococcus epidermidis

text: Sample 48


text: MSA University

text: live

text: Pathogen.cl

text: MSA University

text: missing

text: Egypt

text: Homo sapiens

text: Acne

text: skin

text: Missing

text: Staphylococcus epidermidis

text: Sample 56


text: Southeast university

characteristic: INSDC secondary accession

text: live

text: Generic

text: Leydig cells

characteristic: cell type

text: missing

text: A20 overexpression

text: missing

text: Mus musculus

text: Testis

text: Testis

characteristic: tissue

text: OE_A20_3 TM3 cells O/E A20


text: Southeast university

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission model

characteristic: SRA accession

text: Leydig cells

text: missing

text: A20 overexpression

text: missing

text: Mus musculus

text: Testis

text: Testis

text: OE_A20_2 TM3 cells O/E A20


text: Southeast university

characteristic: INSDC first public

text: live

text: Generic

characteristic: cell line

text: Leydig cells

text: missing

text: A20 overexpression

text: missing

text: Mus musculus

characteristic: organism

text: Testis

text: Testis

text: OE_A20_1 TM3 cells O/E A20


text: Southeast university

characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission package

text: Leydig cells

text: missing

text: WT

text: missing

text: Mus musculus

text: Testis

text: Testis

text: control_3 TM3 cells O/E control


text: Southeast university

text: live

text: Generic

text: Leydig cells

text: missing

text: WT

characteristic: genotype

text: missing

text: Mus musculus

text: Testis

text: Testis

text: control_2 TM3 cells O/E control

characteristic: title


characteristic: External Id

text: Southeast university

text: live

text: Generic

text: Leydig cells

text: missing

text: WT

text: missing

text: Mus musculus

text: Testis

text: Testis

text: control_1 TM3 cells O/E control


Alabama

text: USDA Southeast Research Poultry Laboratory

text: live

text: Pathogen.cl

text: Auburn University

text: USA: Alabama

text: Gallus gallus domesticus

characteristic: host

text: Mild lymphocytic myocarditis and moderate hepatic sinusoidal congestion

text: Chicken

characteristic: isolate

text: Avian orthoreovirus

text: Alabama

text: Pathogen: clinical or host-associated sample from Avian orthoreovirus


text: live

characteristic: INSDC status

text: Pathogen.cl

text: University of Georgia

text: USA: Alabama

text: Gallus gallus domesticus

text: Tenosynovitis

text: Chicken

text: Avian orthoreovirus

characteristic: strain


text: live

text: Pathogen.cl

text: University of Georgia

text: USA: Iowa

text: Gallus gallus domesticus

text: Tenosynovitis

text: Chicken

text: Avian orthoreovirus


text: live

text: Pathogen.cl

text: University of Georgia

text: Gallus gallus domesticus

text: Vaccine strain

text: Chicken

text: Avian orthoreovirus


text: Harvard Chan Bioinformatics Core, Biostatistics, The Harvard T. H. Chan School of Public Health

characteristic: INSDC secondary accession

text: live

text: Generic

text: astrocyte

characteristic: cell type

text: missing

text: WT

text: missing

text: Mus musculus

text: optic nerve proper

text: B6J.129(Cg)-Rpl22tm1.1Psam/SjJ (The Jackson Laboratory, strain #029977) x B6.Cg-Tg (GFAP-Cre) 73.12Mvs/J (The Jackson Laboratory, strain #012886)

text: optic nerve proper

text: ONP, day 30 post microbeads injection, rep7

text: microbeads injection

characteristic: treatment


characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission model

text: astrocyte

text: missing

text: WT

text: missing

text: Mus musculus

text: optic nerve proper

text: optic nerve proper

characteristic: tissue

text: ONP, day 30 post microbeads injection, rep6

text: microbeads injection


characteristic: INSDC first public

text: live

text: Generic

characteristic: SRA accession

text: astrocyte

text: missing

text: WT

text: missing

text: Mus musculus

text: optic nerve proper

text: optic nerve proper

text: ONP, day 30 post microbeads injection, rep5

text: microbeads injection


characteristic: INSDC last update

text: live

text: Generic

text: astrocyte

text: missing

text: WT

text: missing

text: Mus musculus

characteristic: organism

text: optic nerve proper

text: optic nerve proper

text: ONP, day 30 post microbeads injection, rep4

text: microbeads injection


text: live

text: Generic

characteristic: NCBI submission package

text: astrocyte

text: missing

text: WT

characteristic: genotype

text: missing

text: Mus musculus

text: optic nerve proper

text: optic nerve proper

text: ONP, day 30 post microbeads injection, rep3

text: microbeads injection


characteristic: External Id

text: live

text: Generic

text: astrocyte

text: missing

text: WT

text: missing

text: Mus musculus

text: optic nerve proper

text: optic nerve proper

text: ONP, day 30 post microbeads injection, rep2

characteristic: title

text: microbeads injection


text: live

text: Generic

text: astrocyte

text: missing

text: WT

text: missing

text: Mus musculus

text: optic nerve proper

text: optic nerve proper

text: ONP, day 30 post microbeads injection, rep1

text: microbeads injection


text: live

text: Generic

text: astrocyte

text: missing

text: WT

text: missing

text: Mus musculus

text: optic nerve proper

text: optic nerve proper

text: ONP, day 7 post microbeads injection, rep4

text: microbeads injection


text: live

text: Generic

text: astrocyte

text: missing

text: WT

text: missing

text: Mus musculus

text: optic nerve proper

text: optic nerve proper

text: ONP, day 7 post microbeads injection, rep3

text: microbeads injection


text: live

text: Generic

text: astrocyte

text: missing

text: WT

text: missing

text: Mus musculus

text: optic nerve proper

text: optic nerve proper

text: ONP, day 7 post microbeads injection, rep2

text: microbeads injection


text: live

text: Generic

text: astrocyte

text: missing

text: WT

text: missing

text: Mus musculus

text: optic nerve proper

text: optic nerve proper

text: ONP, day 7 post microbeads injection, rep1

text: microbeads injection


text: live

text: Generic

text: astrocyte

text: missing

text: WT

text: missing

text: Mus musculus

text: optic nerve head

text: optic nerve head

text: ONH, day 30 post microbeads injection, rep7

text: microbeads injection


text: live

text: Generic

text: astrocyte

text: missing

text: WT

text: missing

text: Mus musculus

text: optic nerve head

text: optic nerve head

text: ONH, day 30 post microbeads injection, rep6

text: microbeads injection


text: live

text: Generic

text: astrocyte

text: missing

text: WT

text: missing

text: Mus musculus

text: optic nerve head

text: optic nerve head

text: ONH, day 30 post microbeads injection, rep5

text: microbeads injection


text: live

text: Generic

text: astrocyte

text: missing

text: WT

text: missing

text: Mus musculus

text: optic nerve head

text: optic nerve head

text: ONH, day 30 post microbeads injection, rep4

text: microbeads injection


text: Harvard Chan Bioinformatics Core, Biostatistics, The Harvard T. H. Chan School of Public Health

text: live

text: Generic

text: astrocyte

text: missing

text: WT

text: missing

text: Mus musculus

text: optic nerve head

text: optic nerve head

text: ONH, day 30 post microbeads injection, rep3

text: microbeads injection


text: live

text: Generic

text: astrocyte

text: missing

text: WT

text: missing

text: Mus musculus

text: optic nerve head

text: B6J.129(Cg)-Rpl22tm1.1Psam/SjJ (The Jackson Laboratory, strain #029977) x B6.Cg-Tg (GFAP-Cre) 73.12Mvs/J (The Jackson Laboratory, strain #012886)

text: optic nerve head

text: ONH, day 30 post microbeads injection, rep2

text: microbeads injection


text: live

text: Generic

text: astrocyte

text: missing

text: WT

text: missing

text: Mus musculus

text: optic nerve head

text: optic nerve head

text: ONH, day 30 post microbeads injection, rep1

text: microbeads injection


text: live

text: Generic

text: astrocyte

text: missing

text: WT

text: missing

text: Mus musculus

text: optic nerve head

text: optic nerve head

text: ONH, day 7 post microbeads injection, rep4

text: microbeads injection


text: live

text: Generic

text: astrocyte

text: missing

text: WT

text: missing

text: Mus musculus

text: optic nerve head

text: optic nerve head

text: ONH, day 7 post microbeads injection, rep3

text: microbeads injection


text: live

text: Generic

text: astrocyte

text: missing

text: WT

text: missing

text: Mus musculus

text: optic nerve head

text: optic nerve head

text: ONH, day 7 post microbeads injection, rep2

text: microbeads injection


text: live

text: Generic

text: astrocyte

text: missing

text: WT

text: missing

text: Mus musculus

text: optic nerve head

text: optic nerve head

text: ONH, day 7 post microbeads injection, rep1

text: microbeads injection


text: University of Lausanne

text: live

text: Generic

text: missing

text: missing

text: non infected

characteristic: infection

text: Mus musculus

text: Lymph node

text: Lymph node

text: Vehicle


text: University of Lausanne

text: live

characteristic: INSDC status

text: Generic

text: missing

text: missing

text: non infected

text: Mus musculus

text: Lymph node

text: Lymph node


text: University of Lausanne

text: live

text: Generic

text: missing

text: missing

text: LmSd infected

text: Mus musculus

text: Lymph node

characteristic: strain

text: Lymph node

text: Vehicle


text: University of Lausanne

characteristic: INSDC secondary accession

text: live

text: Generic

text: missing

text: missing

text: LmSd infected

text: Mus musculus

text: Lymph node

text: Lymph node


text: Biomedical Genetics, University of Rochester Medical Center

text: live

text: Generic

text: missing

text: 6hour post fertilization

characteristic: developmental stages

text: wild type

text: missing

text: Danio rerio

text: whole embryo

text: whole embryo

text: DAC


text: live

text: Generic

text: missing

text: 6hour post fertilization

text: wild type

text: missing

text: Danio rerio

text: whole embryo

text: whole embryo

text: DMSO

characteristic: treatment


characteristic: INSDC center name

text: live

text: Generic

text: missing

text: 6hour post fertilization

text: wild type

text: missing

text: Danio rerio

text: whole embryo

text: whole embryo

text: TDCIPP


text: Department of Ophthalmology, Kyoto Prefectural University of Medicine

text: live

text: Generic

characteristic: NCBI submission model

text: Primary

characteristic: cell line

text: Conjunctival epithelial cell

characteristic: cell type

text: missing

text: Mock

text: missing

text: Homo sapiens

text: Conjunctiva

text: Conjunctiva

text: untreated


characteristic: INSDC first public

text: live

text: Generic

characteristic: SRA accession

text: Primary

text: Conjunctival epithelial cell

text: missing

text: IR

text: missing

text: Homo sapiens

text: Conjunctiva

text: Conjunctiva

characteristic: tissue

text: irradiation


text: Li Lab, Experimental and Clinical Pharmacology, University of Minnesota

characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission package

text: female

characteristic: Sex

text: 10 month

characteristic: age

text: missing

text: Wild-type C57BL/6

text: missing

text: Mus musculus

characteristic: organism

text: brain

text: brain

text: Female 3 UI [X21226]

text: Uninfected


characteristic: External Id

text: live

characteristic: INSDC status

text: Generic

text: female

text: 10 month

text: missing

text: Wild-type C57BL/6

characteristic: genotype

text: missing

text: Mus musculus

text: brain

text: brain

text: Female 2 UI [X21650]

characteristic: title

text: Uninfected


characteristic: INSDC secondary accession

text: live

text: Generic

text: female

text: 10 month

text: missing

text: Wild-type C57BL/6

text: missing

text: Mus musculus

text: brain

text: brain

text: Female 1 UI [X21649]

text: Uninfected

characteristic: treatment


characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission model

text: male

text: 10 month

text: missing

text: Wild-type C57BL/6

text: missing

text: Mus musculus

text: brain

text: brain

text: Male 3 UI [X21209]

text: Uninfected


text: live

text: Generic

text: male

text: 10 month

text: missing

text: Wild-type C57BL/6

text: missing

text: Mus musculus

text: brain

text: brain

text: Male 2 UI [X21648]

text: Uninfected


text: live

text: Generic

text: male

text: 10 month

text: missing

text: Wild-type C57BL/6

text: missing

text: Mus musculus

text: brain

text: brain

text: Male 1 UI [X21646]

text: Uninfected


text: live

text: Generic

text: female

text: 10 month

text: missing

text: Wild-type C57BL/6

text: missing

text: Mus musculus

text: brain

text: brain

text: Female 3 SARS2 [X21212]


text: live

text: Generic

text: female

text: 10 month

text: missing

text: Wild-type C57BL/6

text: missing

text: Mus musculus

text: brain

text: brain

text: Female 2 SARS2 [X21195]


text: live

text: Generic

text: female

text: 10 month

text: missing

text: Wild-type C57BL/6

text: missing

text: Mus musculus

text: brain

text: brain

text: Female 1 SARS2 [X21252]


text: live

text: Generic

text: male

text: 10 month

text: missing

text: Wild-type C57BL/6

text: missing

text: Mus musculus

text: brain

text: brain

text: Male 3 SARS2 [X21193]


text: live

text: Generic

text: male

text: 10 month

text: missing

text: Wild-type C57BL/6

text: missing

text: Mus musculus

text: brain

text: brain

text: Male 2 SARS2 [X21192]


text: live

text: Generic

text: male

text: 10 month

text: missing

text: Wild-type C57BL/6

text: missing

text: Mus musculus

text: brain

text: brain

text: Male 1 SARS2 [X21260]


text: Rutgers University

text: live

text: Generic

text: tissue

characteristic: cell type

text: missing

text: missing

text: Mus musculus

text: Ileum

characteristic: strain

text: Ileum

text: LGG, mouse 5

text: LGG monocolonized


text: Rutgers University

characteristic: INSDC first public

text: live

text: Generic

characteristic: SRA accession

text: tissue

text: missing

text: missing

text: Mus musculus

text: Ileum

text: Ileum

text: LGG, mouse 4

text: LGG monocolonized


text: Rutgers University

characteristic: INSDC last update

text: live

text: Generic

text: tissue

text: missing

text: missing

text: Mus musculus

text: Ileum

text: Ileum

characteristic: tissue

text: LGG, mouse 3

text: LGG monocolonized


text: Rutgers University

text: live

text: Generic

characteristic: NCBI submission package

text: tissue

text: missing

text: missing

text: Mus musculus

text: Ileum

text: Ileum

text: LGG, mouse 2

text: LGG monocolonized


text: Rutgers University

text: live

text: Generic

text: tissue

text: missing

text: missing

text: Mus musculus

text: Ileum

text: Ileum

text: LGG, mouse 1

text: LGG monocolonized


text: Rutgers University

text: live

text: Generic

text: tissue

text: missing

text: missing

text: Mus musculus

text: Ileum

text: Ileum

text: RG, mouse 5

text: R. gnavus monocolonized


text: Rutgers University

text: live

text: Generic

text: tissue

text: missing

text: missing

text: Mus musculus

text: Ileum

text: Ileum

text: RG, mouse 4

text: R. gnavus monocolonized