characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: USA

text: Pathogen.env

characteristic: NCBI submission model

characteristic: ProjectAccession

text: environmental/food/other

text: North Carolina

text: Escherichia

text: USA:NC

text: canine prepuce

characteristic: isolation source

text: dog:FOODON_03414847, prepuce:UBERON_0011374

characteristic: ontological term

text: Escherichia coli

text: animal

text: coli

value: amoxicillin-clavulanic acid

value: orbifloxacin

value: cefovecin

value: doxycycline

value: tetracycline

value: piperacillin-tazobactam

value: pradofloxacin


status: PUBLIC

characteristic: External Id

text: veterinary clinical/research| companion animal

tag: attribute

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: USA

text: Pathogen.env

characteristic: NCBI submission package

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: MN

characteristic: collected by

characteristic: collection date

text: Escherichia

characteristic: genus

text: USA:MN

characteristic: geo loc name

text: canine kidney

text: dog:FOODON_03414847, kidney:UBERON_0002113

text: Escherichia coli

characteristic: organism

text: animal

characteristic: source type

text: coli

characteristic: species

characteristic: strain

text: Pathogen: environmental/food/other sample from Escherichia coli

characteristic: title

type: AMR curated data - CABBAGE

value: ampicillin

value: broth dilution

value: mg/L

value: Sensititre

value: Escherichia coli

value: gentamicin

value: imipenem

value: marbofloxacin

value: cefpodoxime

value: cephalexin

value: ceftazidime

value: chloramphenicol

value: enrofloxacin


characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

characteristic: INSDC status

characteristic: ProjectAccession

text: environmental/food/other

text: OADDL - OK

text: Staphylococcus

text: USA:OK

text: canine skin swab

characteristic: isolation source

text: canis lupus familiaris:NCBITAXON_9615, swab:NCIT_C17627, zone of skin:UBERON_0000014

characteristic: ontological term

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

text: Pathogen: environmental/food/other sample from Staphylococcus pseudintermedius

type: AMR

value: not defined

value: CLSI

value: MIC

value: 96-Well Plate

value: Trek

value: oxacillin

value: cephalothin

value: minocycline

value: nitrofurantoin

value: amoxicillin-clavulanic acid


characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: PublicAccession

text: environmental/food/other

text: OADDL - OK

text: Staphylococcus

text: USA:OK

text: canine skin swab

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

value: doxycycline

value: mg/L

value: Sensititre

value: imipenem

value: amikacin

value: trimethoprim-sulfamethoxazole

value: cefovecin

value: ampicillin


text: live

text: USA

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: OADDL - OK

characteristic: collected by

characteristic: collection date

text: Escherichia

characteristic: genus

text: USA:OK

characteristic: geo loc name

text: canine urine

text: dog:FOODON_03414847, urine:UBERON_0001088

text: Escherichia coli

text: animal

text: coli

value: cefpodoxime

value: broth dilution

value: Escherichia coli

value: gentamicin

value: cefazolin

value: enrofloxacin

value: piperacillin-tazobactam

value: tetracycline

value: cephalexin


characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

text: USA

text: Pathogen.env

text: environmental/food/other

text: North Carolina

text: Escherichia

text: USA:NC

text: canine transtracheal wash

text: dog:FOODON_03414847| transtracheal wash:CURATION_0000446

text: Escherichia coli

characteristic: organism

text: animal

characteristic: source type

text: coli

characteristic: species

characteristic: strain

characteristic: title

value: orbifloxacin

value: chloramphenicol

value: amoxicillin-clavulanic acid

value: pradofloxacin

value: marbofloxacin

value: ceftazidime


characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: Pathogen.env

characteristic: ProjectAccession

text: environmental/food/other

text: OADDL - OK

text: Escherichia

text: USA:TX

text: canine urine

characteristic: isolation source

characteristic: ontological term

text: Escherichia coli

text: animal

text: coli

value: mg/L

value: Sensititre

value: doxycycline


characteristic: INSDC secondary accession

text: live

text: USA

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: North Carolina

characteristic: collected by

characteristic: collection date

text: Escherichia

text: USA:NC

text: canine urine

text: Escherichia coli

text: animal

text: coli

value: broth dilution

value: ampicillin

value: trimethoprim-sulfamethoxazole

value: imipenem

value: cefovecin

value: amikacin


characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

text: environmental/food/other

text: North Carolina

text: Staphylococcus

characteristic: genus

text: USA:NC

characteristic: geo loc name

text: canine urine

text: Staphylococcus pseudintermedius

characteristic: organism

text: animal

characteristic: source type

text: pseudintermedius

characteristic: species

value: not defined

value: CLSI

value: MIC

value: 96-Well Plate

value: Trek

value: clindamycin

value: minocycline

value: enrofloxacin

value: penicillin


characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

characteristic: ProjectAccession

text: environmental/food/other

text: ISUVDL

text: Staphylococcus

text: USA:IA

text: canine nasal swab

text: dog:FOODON_03414847| nasal:CURATION_0000466| swab:NCIT_C17627

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

characteristic: strain

characteristic: title

value: pradofloxacin

value: mg/L

value: Sensititre

value: cefazolin

value: marbofloxacin

value: chloramphenicol

value: tetracycline

value: gentamicin


characteristic: INSDC secondary accession

text: live

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: ISUVDL

text: Staphylococcus

text: USA:IA

text: canine ear swab

characteristic: isolation source

text: dog:FOODON_03414847, ear:UBERON_0001690, swab:NCIT_C17627

characteristic: ontological term

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

value: not defined

value: cefovecin

value: ampicillin

value: nitrofurantoin

value: rifampin

value: erythromycin

value: vancomycin

value: trimethoprim-sulfamethoxazole


characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

text: environmental/food/other

text: OADDL - OK

characteristic: collected by

characteristic: collection date

text: Staphylococcus

characteristic: genus

text: USA:AR

text: canine joint fluid

text: synovial fluid:UBERON_0001090, dog:FOODON_03414847

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

value: CLSI

value: MIC

value: 96-Well Plate

value: Trek

value: oxacillin

value: enrofloxacin

value: minocycline


characteristic: External Id

text: live

text: environmental/food/other

text: OADDL - OK

text: Staphylococcus

text: USA:OK

characteristic: geo loc name

text: canine ear swab

text: Staphylococcus pseudintermedius

characteristic: organism

text: animal

characteristic: source type

text: pseudintermedius

characteristic: species

value: cefazolin

value: mg/L

value: Sensititre

value: tetracycline

value: marbofloxacin

value: pradofloxacin


characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

characteristic: ProjectAccession

text: environmental/food/other

text: ISUVDL

text: Staphylococcus

text: USA:IA

text: canine ear swab

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

characteristic: strain

value: not defined

value: doxycycline

value: rifampin

value: gentamicin

value: chloramphenicol

value: amoxicillin-clavulanic acid


characteristic: INSDC secondary accession

text: live

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: ISUVDL

text: Staphylococcus

text: USA:IA

text: canine ear swab

characteristic: isolation source

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

characteristic: title

value: CLSI

value: MIC

value: 96-Well Plate

value: cefovecin

value: cefpodoxime

value: cephalothin

value: erythromycin

value: ampicillin

value: penicillin


characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

text: environmental/food/other

text: Michigan State University VDL

characteristic: collected by

characteristic: collection date

text: Staphylococcus

text: USA:MI

text: abscess (Canis lupus familiaris)

text: abscess:HP_0025615, canis lupus familiaris:NCBITAXON_9615

characteristic: ontological term

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

value: Trek

value: mg/L

value: Sensititre

value: imipenem

value: ceftiofur


characteristic: External Id

text: live

text: environmental/food/other

text: Michigan State University VDL

text: Staphylococcus

characteristic: genus

text: USA:MI

characteristic: geo loc name

text: urine (Canis lupus familaris)

text: canis lupus familiaris:NCBITAXON_9615, urine:UBERON_0001088

text: Staphylococcus pseudintermedius

characteristic: organism

text: animal

characteristic: source type

text: pseudintermedius

value: not defined

value: enrofloxacin

value: rifampin

value: doxycycline

value: cefoxitin


characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

characteristic: ProjectAccession

text: environmental/food/other

text: North Carolina

text: Escherichia

text: USA:NC

text: canine urine

text: Escherichia coli

text: animal

text: coli

characteristic: species

value: broth dilution

value: Escherichia coli

value: pradofloxacin

value: cefazolin

value: piperacillin-tazobactam

value: orbifloxacin

value: tetracycline

value: ceftazidime

value: amikacin

value: gentamicin

value: cephalexin

value: marbofloxacin


characteristic: INSDC secondary accession

text: live

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: OADDL - OK

text: Staphylococcus

text: USA:OK

text: canine urine

characteristic: isolation source

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

characteristic: strain

value: not defined

value: CLSI

value: MIC

value: 96-Well Plate

value: Trek

value: mg/L

value: Sensititre

value: cephalothin

value: oxacillin

value: cefovecin

value: clindamycin

value: minocycline

value: trimethoprim-sulfamethoxazole


characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

text: environmental/food/other

text: OADDL - OK

characteristic: collected by

characteristic: collection date

text: Staphylococcus

text: USA:OK

text: canine mouth swab

text: dog:FOODON_03414847, mouth:UBERON_0000165, swab:NCIT_C17627

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

characteristic: title

value: amikacin

value: chloramphenicol

value: rifampin

value: imipenem

value: nitrofurantoin

value: enrofloxacin

value: pradofloxacin


characteristic: External Id

text: live

text: environmental/food/other

text: OADDL - OK

text: Staphylococcus

characteristic: genus

text: USA:OK

characteristic: geo loc name

text: canine mouth swab

characteristic: ontological term

text: Staphylococcus pseudintermedius

characteristic: organism

text: animal

text: pseudintermedius

value: not defined

value: CLSI

value: MIC

value: 96-Well Plate

value: amoxicillin-clavulanic acid

value: cefazolin

value: erythromycin


characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

characteristic: ProjectAccession

text: environmental/food/other

text: ISUVDL

text: Escherichia

text: USA:IA

text: canine urine

text: Escherichia coli

text: animal

characteristic: source type

text: coli

value: broth dilution

value: mg/L

value: Sensititre

value: Escherichia coli

value: doxycycline

value: cefpodoxime

value: orbifloxacin

value: piperacillin-tazobactam

value: cephalexin

value: ampicillin

value: gentamicin


characteristic: INSDC secondary accession

text: live

text: USA

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: ISUVDL

text: Escherichia

text: USA:IA

text: canine urine

characteristic: isolation source

text: Escherichia coli

text: animal

text: coli

characteristic: species

value: ceftazidime

value: imipenem

value: marbofloxacin

value: trimethoprim-sulfamethoxazole

value: enrofloxacin

value: pradofloxacin


characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

text: USA

text: environmental/food/other

text: ISUVDL

characteristic: collected by

characteristic: collection date

text: Escherichia

text: USA:IA

text: canine urine

text: Escherichia coli

text: animal

text: coli

characteristic: strain

value: broth dilution

value: amoxicillin-clavulanic acid

value: cefazolin

value: chloramphenicol


characteristic: External Id

text: live

text: environmental/food/other

text: Michigan State University VDL

text: Staphylococcus

characteristic: genus

text: USA:MI

characteristic: geo loc name

text: urine (Canis lupus familaris)

characteristic: ontological term

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

characteristic: title

value: not defined

value: CLSI

value: MIC

value: 96-Well Plate

value: Trek

value: mg/L

value: Sensititre

value: nitrofurantoin

value: erythromycin

value: oxacillin

value: clindamycin

value: rifampin

value: cephalothin


characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

characteristic: ProjectAccession

text: environmental/food/other

text: North Carolina

text: Staphylococcus

text: USA:NC

text: canine skin

text: dog:FOODON_03414847, zone of skin:UBERON_0000014

text: Staphylococcus pseudintermedius

characteristic: organism

text: animal

text: pseudintermedius

value: amikacin

value: vancomycin

value: ampicillin

value: pradofloxacin

value: marbofloxacin


characteristic: INSDC secondary accession

text: live

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: North Carolina

text: Staphylococcus

text: USA:NC

text: canine skin

characteristic: isolation source

text: Staphylococcus pseudintermedius

text: animal

characteristic: source type

text: pseudintermedius

value: not defined

value: CLSI

value: cefpodoxime

value: cefovecin

value: chloramphenicol

value: cefazolin

value: penicillin


text: companion animal

characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

text: environmental/food/other

text: North Carolina

characteristic: collected by

characteristic: collection date

text: Staphylococcus

text: USA:NC

text: Liver (Canine)

text: dog:foodon_03414847, liver:uberon_0002107

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

characteristic: species

value: MIC

value: 96-Well Plate

value: Trek

value: mg/L

value: Sensititre

value: trimethoprim-sulfamethoxazole


characteristic: External Id

text: live

text: environmental/food/other

text: North Carolina

text: Staphylococcus

characteristic: genus

text: USA:NC

characteristic: geo loc name

text: canine skin

characteristic: ontological term

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

characteristic: strain

value: minocycline

value: amikacin

value: tetracycline

value: nitrofurantoin

value: amoxicillin-clavulanic acid


characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

characteristic: ProjectAccession

text: environmental/food/other

text: Michigan State University VDL

text: Staphylococcus

text: USA:MI

text: urine (Canis lupus familaris)

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

characteristic: title

value: not defined

value: CLSI

value: erythromycin

value: gentamicin

value: doxycycline

value: clindamycin


characteristic: INSDC secondary accession

text: live

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: Michigan State University VDL

text: Staphylococcus

text: USA:MI

text: abscess (Canis lupus familiaris)

characteristic: isolation source

text: Staphylococcus pseudintermedius

characteristic: organism

text: animal

text: pseudintermedius

value: MIC

value: cephalothin

value: cefoxitin

value: cefovecin

value: ampicillin

value: penicillin


characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

text: USA

text: environmental/food/other

text: North Carolina

characteristic: collected by

characteristic: collection date

text: Escherichia

text: USA:NC

text: canine urine

text: Escherichia coli

text: animal

characteristic: source type

text: coli

value: chloramphenicol

value: broth dilution

value: mg/L

value: Sensititre

value: Escherichia coli

value: cefpodoxime

value: piperacillin-tazobactam

value: cephalexin

value: trimethoprim-sulfamethoxazole

value: marbofloxacin

value: orbifloxacin


characteristic: External Id

text: veterinary clinical/research

text: live

text: environmental/food/other

text: ISUVDL

text: Staphylococcus

characteristic: genus

text: USA:IA

characteristic: geo loc name

text: implant

characteristic: ontological term

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

characteristic: species

value: not defined

value: CLSI

value: MIC

value: 96-Well Plate

value: Trek

value: doxycycline

value: oxacillin

value: amoxicillin-clavulanic acid

value: cefazolin

value: imipenem

value: tetracycline


characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

characteristic: ProjectAccession

text: environmental/food/other

text: Michigan State University VDL

text: Escherichia

text: USA:MI

text: urine (Canis lupus familaris)

text: Escherichia coli

text: animal

text: coli

characteristic: strain

value: ceftazidime

value: broth dilution

value: mg/L

value: Sensititre

value: Escherichia coli

value: enrofloxacin

value: chloramphenicol

value: gentamicin

value: ampicillin

value: amikacin

value: cefpodoxime


characteristic: INSDC secondary accession

text: live

text: USA

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: OADDL - OK

text: Escherichia

text: USA:OK

text: canine wound swab

characteristic: isolation source

text: dog:FOODON_03414847| swab:NCIT_C17627| wound:CURATION_0000442

text: Escherichia coli

text: animal

text: coli

characteristic: title

value: marbofloxacin

value: orbifloxacin

value: piperacillin-tazobactam

value: pradofloxacin

value: trimethoprim-sulfamethoxazole

value: doxycycline

value: cefovecin


text: veterinary clinical/research| companion animal

characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

text: USA

text: environmental/food/other

text: North Carolina

characteristic: collected by

characteristic: collection date

text: Escherichia

text: USA:NC

text: canine urine

text: Escherichia coli

characteristic: organism

text: animal

text: coli

value: imipenem

value: broth dilution

value: cephalexin

value: tetracycline

value: ceftazidime

value: cefazolin


characteristic: External Id

text: FDA Center for Food Safety and Applied Nutrition

text: live

text: USA

text: environmental/food/other

text: Michigan State University VDL

text: Escherichia

characteristic: genus

text: USA:AR

characteristic: geo loc name

text: urine (Canis lupus familaris)

characteristic: ontological term

text: Escherichia coli

text: animal

characteristic: source type

text: coli

value: penicillin

value: mg/L

value: Sensititre

value: Escherichia coli

value: ticarcillin

value: ceftiofur

value: cefoxitin

value: gentamicin

value: rifampin

value: erythromycin


characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

characteristic: ProjectAccession

text: environmental/food/other

text: OADDL - OK

text: Escherichia

text: USA:OK

text: canine urine

text: Escherichia coli

text: animal

text: coli

characteristic: species

value: orbifloxacin

value: piperacillin-tazobactam

value: doxycycline

value: pradofloxacin

value: cefpodoxime

value: trimethoprim-sulfamethoxazole

value: ampicillin

value: cefovecin


characteristic: INSDC secondary accession

text: live

text: USA

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: North Carolina

text: Escherichia

text: USA:VA

text: canine urine

characteristic: isolation source

text: Escherichia coli

text: animal

text: coli

characteristic: strain

value: chloramphenicol

value: broth dilution

value: mg/L

value: cephalexin

value: cefazolin

value: marbofloxacin

value: imipenem


characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

text: USA

text: environmental/food/other

text: ISUVDL

characteristic: collected by

characteristic: collection date

text: Escherichia

text: USA:IA

text: canine urine

text: Escherichia coli

text: animal

text: coli

characteristic: title

value: Sensititre

value: Escherichia coli

value: enrofloxacin

value: amoxicillin-clavulanic acid

value: gentamicin


characteristic: External Id

text: live

text: USA

text: environmental/food/other

text: Michigan State University VDL

text: Escherichia

characteristic: genus

text: USA:WI

characteristic: geo loc name

text: uterus (Canis lupus familiaris)

text: canis lupus familiaris:NCBITAXON_9615, uterus:UBERON_0000995

characteristic: ontological term

text: Escherichia coli

characteristic: organism

text: animal

text: coli

value: piperacillin-tazobactam

value: pradofloxacin

value: orbifloxacin

value: doxycycline


characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

characteristic: ProjectAccession

text: environmental/food/other

text: OADDL - OK

text: Escherichia

text: USA:OK

text: canine urine

text: Escherichia coli

text: animal

characteristic: source type

text: coli

text: Pathogen: environmental/food/other sample from Escherichia coli

value: trimethoprim-sulfamethoxazole

value: amikacin

value: ceftazidime


characteristic: INSDC secondary accession

text: live

text: USA

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: ISUVDL

text: Escherichia

text: USA:IA

text: canine urine

characteristic: isolation source

text: Escherichia coli

text: animal

text: coli

characteristic: species

value: chloramphenicol

value: broth dilution

value: mg/L

value: tetracycline

value: ampicillin


characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

text: USA

text: environmental/food/other

text: OADDL - OK

characteristic: collected by

characteristic: collection date

text: Escherichia

text: USA:OK

text: canine urine

text: Escherichia coli

text: animal

text: coli

characteristic: strain

value: Sensititre

value: marbofloxacin

value: imipenem

value: cefpodoxime

value: cephalexin


characteristic: External Id

text: live

text: USA

text: environmental/food/other

text: OADDL - OK

text: Escherichia

characteristic: genus

text: USA:OK

characteristic: geo loc name

text: canine thoracic fluid

text: dog:FOODON_03414847| fluid:CURATION_0000480

characteristic: ontological term

text: Escherichia coli

text: animal

text: coli

characteristic: title

value: Escherichia coli

value: amoxicillin-clavulanic acid

value: enrofloxacin

value: piperacillin-tazobactam

value: cefovecin

value: gentamicin


characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

characteristic: ProjectAccession

text: environmental/food/other

text: Michigan State University VDL

text: Escherichia

text: USA:MI

text: urine (Canis lupus familaris)

text: Escherichia coli

characteristic: organism

text: animal

text: coli

value: doxycycline

value: erythromycin

value: amikacin

value: trimethoprim-sulfamethoxazole

value: cefoxitin

value: penicillin

value: clindamycin


characteristic: INSDC secondary accession

text: live

text: USA

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: Michigan State University VDL

text: Escherichia

text: USA:NY

text: urine (Canis lupus familaris)

characteristic: isolation source

text: Escherichia coli

text: animal

characteristic: source type

text: coli

value: broth dilution

value: mg/L

value: Sensititre

value: rifampin

value: marbofloxacin

value: ticarcillin

value: ceftiofur

value: cefazolin


characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

text: USA

text: environmental/food/other

text: North Carolina

characteristic: collected by

characteristic: collection date

text: Escherichia

text: USA:NC

text: canine abscess

text: dog:FOODON_03414847, abscess:HP_0025615

text: Escherichia coli

text: animal

text: coli

characteristic: species

value: Escherichia coli

value: orbifloxacin

value: tetracycline

value: enrofloxacin

value: ceftazidime

value: ampicillin

value: cephalexin

value: amoxicillin-clavulanic acid

value: cefpodoxime

value: piperacillin-tazobactam

value: cefovecin

value: chloramphenicol


Aerococcus sp.

characteristic: External Id

text: Shanghai Academy of Agricultural Sciences

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: China: Shanghai

characteristic: geo loc name

text: soil

text: Aerococcus agrisoli

text: pure culture

characteristic: sample type

characteristic: strain

text: Microbe sample from Aerococcus sp. SJQ22

text: type strain of Aerococcus agrisoli

characteristic: type-material


characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: Pathogen.env

characteristic: NCBI submission package

characteristic: ProjectAccession

text: environmental/food/other

text: OADDL - OK

text: Escherichia

characteristic: genus

text: USA:OK

text: urine (Canis lupus familiaris)

characteristic: ontological term

text: Escherichia coli

characteristic: organism

text: animal

text: coli

characteristic: title

value: trimethoprim-sulfamethoxazole

value: broth dilution

value: mg/L

value: Sensititre

value: pradofloxacin

value: amikacin

value: doxycycline


characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: USA

text: Pathogen.env

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: ISUVDL

characteristic: collected by

characteristic: collection date

text: Escherichia

text: USA:IA

text: urine (Canis lupus familiaris)

characteristic: isolation source

text: Escherichia coli

text: animal

characteristic: source type

text: coli

value: Escherichia coli

value: orbifloxacin

value: marbofloxacin

value: gentamicin

value: tetracycline


characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: USA

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: ISUVDL

text: Escherichia

text: USA:IA

characteristic: geo loc name

text: urine (Canis lupus familiaris)

text: Escherichia coli

text: animal

text: coli

characteristic: species

characteristic: strain

value: imipenem

value: cephalexin

value: ceftazidime

value: enrofloxacin

value: ampicillin

value: cefazolin


text: live

characteristic: INSDC status

text: USA

text: Pathogen.env

characteristic: NCBI submission package

characteristic: ProjectAccession

text: environmental/food/other

text: ISUVDL

text: Escherichia

characteristic: genus

text: USA:IA

text: urine (Canis lupus familiaris)

characteristic: ontological term

text: Escherichia coli

characteristic: organism

text: animal

text: coli

characteristic: title

value: broth dilution

value: cefpodoxime

value: trimethoprim-sulfamethoxazole

value: amoxicillin-clavulanic acid


characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: USA

text: Pathogen.env

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: Michigan State University VDL

characteristic: collected by

characteristic: collection date

text: Escherichia

text: USA:MI

text: urine (Canis lupus familiaris)

text: Escherichia coli

text: animal

text: coli

value: mg/L

value: Sensititre

value: piperacillin-tazobactam

value: pradofloxacin

value: amikacin


characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: USA

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: Michigan State University VDL

text: Escherichia

text: USA:MI

characteristic: geo loc name

text: urine (Canis lupus familiaris)

characteristic: isolation source

text: Escherichia coli

text: animal

characteristic: source type

text: coli

value: Escherichia coli

value: orbifloxacin

value: marbofloxacin

value: doxycycline

value: cefovecin


text: live

characteristic: INSDC status

text: USA

text: Pathogen.env

characteristic: NCBI submission package

characteristic: ProjectAccession

text: environmental/food/other

text: ISUVDL

text: Escherichia

characteristic: genus

text: USA:SD

text: testicle swab (Canis lupus familiaris)

text: canis lupus familiaris:NCBITAXON_9615, swab:NCIT_C17627, testis:UBERON_0000473

characteristic: ontological term

text: Escherichia coli

text: animal

text: coli

characteristic: species

characteristic: strain

value: enrofloxacin

value: tetracycline

value: chloramphenicol

value: ceftazidime

value: imipenem


characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: USA

text: Pathogen.env

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: OADDL - OK

text: Escherichia

text: USA:OK

text: abdominal swab (Canis lupus familiaris)

text: abdominal:CURATION_0000513| canis lupus familiaris:NCBITAXON_9615| swab:NCIT_C17627

text: Escherichia coli

characteristic: organism

text: animal

text: coli

characteristic: title

value: broth dilution

value: cefazolin

value: trimethoprim-sulfamethoxazole

value: cefpodoxime

value: gentamicin


characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: USA

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: Michigan State University VDL

characteristic: collected by

characteristic: collection date

text: Escherichia

text: USA:MI

characteristic: geo loc name

text: urine (Canis lupus familiaris)

text: Escherichia coli

text: animal

text: coli

value: mg/L

value: Sensititre

value: amoxicillin-clavulanic acid

value: ampicillin

value: cephalexin


text: live

characteristic: INSDC status

text: USA

text: Pathogen.env

characteristic: NCBI submission package

characteristic: ProjectAccession

text: environmental/food/other

text: Michigan State University VDL

text: Escherichia

characteristic: genus

text: USA:MI

text: urine (Canis lupus familiaris)

characteristic: isolation source

characteristic: ontological term

text: Escherichia coli

text: animal

characteristic: source type

text: coli

value: amikacin

value: Escherichia coli

value: orbifloxacin

value: pradofloxacin


characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: USA

text: Pathogen.env

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: ISUVDL

text: Escherichia

text: USA:IA

text: urine (Canis lupus familiaris)

text: Escherichia coli

text: animal

text: coli

characteristic: species

characteristic: strain

value: enrofloxacin

value: doxycycline

value: marbofloxacin


characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: USA

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: OADDL - OK

characteristic: collected by

text: Escherichia

text: USA:OK

text: abdominal swab (Canis lupus familiaris)

text: Escherichia coli

characteristic: organism

text: animal

text: coli

characteristic: title

value: broth dilution

value: chloramphenicol

value: ceftazidime


text: live

characteristic: INSDC status

text: USA

text: Pathogen.env

characteristic: NCBI submission package

characteristic: ProjectAccession

text: environmental/food/other

text: OADDL - OK

characteristic: collection date

text: Escherichia

characteristic: genus

text: USA:MO

characteristic: geo loc name

text: urine (Canis lupus familiaris)

characteristic: isolation source

text: Escherichia coli

text: animal

text: coli

value: cefazolin

value: tetracycline

value: cefpodoxime

value: imipenem


characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: USA

text: Pathogen.env

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: OADDL - OK

text: Escherichia

text: USA:OK

text: urine (Canis lupus familiaris)

characteristic: ontological term

text: Escherichia coli

text: animal

characteristic: source type

text: coli

value: mg/L

value: Sensititre

value: cefovecin

value: amoxicillin-clavulanic acid

value: gentamicin

value: trimethoprim-sulfamethoxazole


characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: USA

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: North Carolina

characteristic: collected by

text: Escherichia

text: USA:NC

text: transtracheal wash (Canis lupus familiaris)

text: canis lupus familiaris:NCBITAXON_9615| transtracheal wash:CURATION_0000446

text: Escherichia coli

text: animal

text: coli

characteristic: species

characteristic: strain

value: Escherichia coli

value: cephalothin

value: clindamycin

value: amikacin

value: ticarcillin

value: ampicillin


text: live

characteristic: INSDC status

text: USA

text: Pathogen.env

characteristic: NCBI submission package

characteristic: ProjectAccession

text: environmental/food/other

text: North Carolina

characteristic: collection date

text: Escherichia

characteristic: genus

text: USA:NC

text: skin (Canis lupus familiaris)

text: canis lupus familiaris:NCBITAXON_9615, zone of skin:UBERON_0000014

text: Escherichia coli

characteristic: organism

text: animal

text: coli

characteristic: title

value: broth dilution

value: piperacillin-tazobactam

value: chloramphenicol

value: doxycycline

value: cephalexin

value: ceftazidime

value: pradofloxacin

value: marbofloxacin


characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: USA

text: Pathogen.env

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: North Carolina

text: Escherichia

text: USA:NC

characteristic: geo loc name

text: abscess (Canis lupus familiaris)

characteristic: isolation source

text: abscess:HP_0025615, canis lupus familiaris:NCBITAXON_9615, dog:FOODON_03414847

text: Escherichia coli

text: animal

text: coli

value: cefazolin

value: mg/L

value: Sensititre

value: cefovecin

value: orbifloxacin

value: cefpodoxime

value: amoxicillin-clavulanic acid


characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: USA

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: North Carolina

characteristic: collected by

text: Escherichia

text: USA:NC

text: urine (Canis lupus familiaris)

text: canis lupus familiaris:NCBITAXON_9615, urine:UBERON_0001088

characteristic: ontological term

text: Escherichia coli

text: animal

characteristic: source type

text: coli

value: amikacin

value: Escherichia coli

value: trimethoprim-sulfamethoxazole

value: enrofloxacin


text: live

characteristic: INSDC status

text: USA

text: Pathogen.env

characteristic: NCBI submission package

characteristic: ProjectAccession

text: environmental/food/other

text: Michigan State University VDL

characteristic: collection date

text: Escherichia

characteristic: genus

text: USA:MI

text: urine (Canis lupus familiaris)

text: Escherichia coli

text: animal

text: coli

characteristic: species

characteristic: strain

value: piperacillin-tazobactam

value: broth dilution

value: tetracycline

value: chloramphenicol

value: gentamicin

value: imipenem


characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: ISUVDL

text: Staphylococcus

text: USA:IA

text: corneal swab (Canis lupus familiaris)

text: canis lupus familiaris:NCBITAXON_9615, swab:NCIT_C17627

text: Staphylococcus pseudintermedius

characteristic: organism

text: animal

text: pseudintermedius

text: Pathogen: environmental/food/other sample from Staphylococcus pseudintermedius

characteristic: title

value: not defined

value: CLSI

value: MIC

value: 96-Well Plate

value: Trek

value: penicillin

value: ampicillin

value: clindamycin

value: oxacillin


characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: ISUVDL

characteristic: collected by

text: Staphylococcus

text: USA:IA

characteristic: geo loc name

text: nasal swab (Canis lupus familiaris)

characteristic: isolation source

text: canis lupus familiaris:NCBITAXON_9615| nasal:CURATION_0000466| swab:NCIT_C17627

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

value: mg/L

value: Sensititre

value: cephalothin

value: nitrofurantoin

value: cefovecin

value: trimethoprim-sulfamethoxazole

value: minocycline


text: veterinary clinical/research| companion animal

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission package

characteristic: ProjectAccession

text: environmental/food/other

text: OADDL - OK

characteristic: collection date

text: Staphylococcus

characteristic: genus

text: USA:OK

text: urine (Canis lupus familiaris)

characteristic: ontological term

text: Staphylococcus pseudintermedius

text: animal

characteristic: source type

text: pseudintermedius

value: gentamicin

value: enrofloxacin

value: amikacin

value: chloramphenicol

value: tetracycline

value: amoxicillin-clavulanic acid


characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: OADDL - OK

text: Staphylococcus

text: USA:OK

text: nasal swab (Canis lupus familiaris)

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

characteristic: species

characteristic: strain

value: not defined

value: CLSI

value: MIC

value: 96-Well Plate

value: Trek

value: imipenem


characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: ISUVDL

characteristic: collected by

text: Staphylococcus

text: USA:IA

text: urine (Canis lupus familiaris)

text: Staphylococcus pseudintermedius

characteristic: organism

text: animal

text: pseudintermedius

characteristic: title

value: rifampin

value: mg/L

value: Sensititre

value: marbofloxacin

value: clindamycin

value: cefpodoxime


text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission package

characteristic: ProjectAccession

text: environmental/food/other

text: North Carolina

characteristic: collection date

text: Staphylococcus

characteristic: genus

text: USA:NC

characteristic: geo loc name

text: ear aspirate (Canis lupus familiaris)

characteristic: isolation source

text: aspirate:NCIT_C13347, canis lupus familiaris:NCBITAXON_9615, dog:FOODON_03414847, ear:UBERON_0001690

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

value: ceftiofur

value: oxacillin

value: ticarcillin

value: cefazolin


characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: OADDL - OK

text: Staphylococcus

text: USA:AR

text: implant swab (Canis lupus familiaris)

text: canis lupus familiaris:NCBITAXON_9615| implant:CURATION_0000474| swab:NCIT_C17627

characteristic: ontological term

text: Staphylococcus pseudintermedius

text: animal

characteristic: source type

text: pseudintermedius

value: penicillin

value: erythromycin

value: cefovecin

value: amikacin

value: enrofloxacin


characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: North Carolina

characteristic: collected by

text: Staphylococcus

text: USA:NC

text: skin (Canis lupus familiaris)

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

characteristic: species

characteristic: strain

value: not defined

value: CLSI

value: MIC

value: 96-Well Plate

value: Trek

value: trimethoprim-sulfamethoxazole

value: vancomycin

value: nitrofurantoin


text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission package

characteristic: ProjectAccession

text: environmental/food/other

text: Michigan State University VDL

characteristic: collection date

text: Staphylococcus

characteristic: genus

text: USA:MI

text: urine (Canis lupus familiaris)

text: Staphylococcus pseudintermedius

characteristic: organism

text: animal

text: pseudintermedius

characteristic: title

value: doxycycline

value: mg/L

value: Sensititre

value: clindamycin

value: marbofloxacin


characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: North Carolina

text: Staphylococcus

text: USA:NC

characteristic: geo loc name

text: draining tract (Canis lupus familiaris)

characteristic: isolation source

text: canis lupus familiaris:NCBITAXON_9615| tract:CURATION_0000447

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

value: chloramphenicol

value: imipenem

value: cefazolin

value: amoxicillin-clavulanic acid

value: ampicillin

value: oxacillin


characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: OADDL - OK

characteristic: collected by

text: Staphylococcus

text: USA:OK

text: ear swab (Canis lupus familiaris)

text: canis lupus familiaris:NCBITAXON_9615, ear:UBERON_0001690, swab:NCIT_C17627

characteristic: ontological term

text: Staphylococcus pseudintermedius

text: animal

characteristic: source type

text: pseudintermedius

value: not defined

value: CLSI

value: MIC

value: cefovecin

value: pradofloxacin

value: enrofloxacin

value: minocycline

value: amikacin


text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission package

characteristic: ProjectAccession

text: environmental/food/other

text: North Carolina

characteristic: collection date

text: Staphylococcus

characteristic: genus

text: USA:NC

text: skin (Canis lupus familiaris)

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

characteristic: species

characteristic: strain

value: 96-Well Plate

value: Trek

value: trimethoprim-sulfamethoxazole

value: mg/L

value: Sensititre

value: tetracycline


characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: North Carolina

text: Staphylococcus

text: USA:NC

text: skin (Canis lupus familiaris)

text: Staphylococcus pseudintermedius

characteristic: organism

text: animal

text: pseudintermedius

characteristic: title

value: chloramphenicol

value: marbofloxacin

value: imipenem


characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: Michigan State University VDL

characteristic: collected by

text: Staphylococcus

text: USA:MI

characteristic: geo loc name

text: uterus (Canis lupus familiaris)

characteristic: isolation source

text: canis lupus familiaris:NCBITAXON_9615, uterus:UBERON_0000995

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

value: not defined

value: cefazolin

value: ampicillin

value: cephalothin

value: nitrofurantoin

value: erythromycin


text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission package

characteristic: ProjectAccession

text: environmental/food/other

text: Michigan State University VDL

characteristic: collection date

text: Staphylococcus

characteristic: genus

text: USA:MI

text: uterus (Canis lupus familiaris)

characteristic: ontological term

text: Staphylococcus pseudintermedius

text: animal

characteristic: source type

text: pseudintermedius

value: CLSI

value: MIC

value: cefovecin

value: minocycline

value: doxycycline

value: cefpodoxime


characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: Michigan State University VDL

text: Staphylococcus

text: USA:MI

text: ear (Canis lupus familiaris)

text: canis lupus familiaris:NCBITAXON_9615, ear:UBERON_0001690

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

characteristic: species

characteristic: strain

value: 96-Well Plate

value: Trek

value: mg/L

value: Sensititre

value: penicillin

value: enrofloxacin

value: clindamycin


characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: ISUVDL

characteristic: collected by

text: Staphylococcus

text: USA:IA

text: skin (Canis lupus familiaris)

text: Staphylococcus pseudintermedius

characteristic: organism

text: animal

text: pseudintermedius

characteristic: title

value: not defined

value: oxacillin

value: pradofloxacin

value: imipenem

value: vancomycin


text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission package

characteristic: ProjectAccession

text: environmental/food/other

text: ISUVDL

characteristic: collection date

text: Staphylococcus

characteristic: genus

text: USA:IA

characteristic: geo loc name

text: corneal swab (Canis lupus familiaris)

characteristic: isolation source

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

value: CLSI

value: MIC

value: chloramphenicol

value: nitrofurantoin


characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: Michigan State University VDL

text: Staphylococcus

text: USA:MI

text: skin (Canis lupus familiaris)

characteristic: ontological term

text: Staphylococcus pseudintermedius

text: animal

characteristic: source type

text: pseudintermedius

value: doxycycline

value: marbofloxacin

value: cefovecin

value: amoxicillin-clavulanic acid

value: cefpodoxime


characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: OADDL - OK

characteristic: collected by

text: Staphylococcus

text: USA:OK

text: draining tract swab (Canis lupus familiaris)

text: canis lupus familiaris:NCBITAXON_9615| swab:NCIT_C17627| tract:CURATION_0000447

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

characteristic: species

characteristic: strain

value: 96-Well Plate

value: Trek

value: cefazolin

value: mg/L

value: Sensititre

value: penicillin

value: gentamicin

value: amikacin


text: Federal University of Mato Grosso

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: 20 m

characteristic: altitude

text: FIOCRUZ

characteristic: biomaterial provider

text: Maria de Fatima Madeira

characteristic: collection date

text: The objective of this study was to perform de novo sequencing of the T. caninum genome and compare these data with other trypanosomatids to provide new insights into the biology and pathogen-host relationship due to the apatogenic characteristic of T. caninum.

characteristic: description

text: Brazil: Rio de Janeiro

text: Canis lupus familiaris

characteristic: host

text: skin

text: 22.54 S 43.12 W

characteristic: lat lon

text: Trypanosoma caninum

characteristic: organism

text: whole organism

characteristic: sample type

text: crio 12064

text: Microbe sample from Trypanosoma caninum

characteristic: title


Trinickia sp. 7GSK02

characteristic: External Id

text: Sun Yat-sen University

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

text: State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University

text: Lihong Qiu, Zenghong Gao

text: 20 cm

characteristic: depth

text: China:Guangdong Province

characteristic: geo loc name

text: Zenghong Gao

characteristic: identified by

text: forest soil

characteristic: isolation source

text: 23.17 N 112.53 E

text: Trinickia terrae

text: cell culture

text: Microbe sample from Trinickia sp. 7GSK02

text: type strain of Trinickia terrae

characteristic: type-material


Burkholderia sp. DHOD12

text: Sun Yat-sen University

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: biomaterial provider

text: Lihong Qiu;Zenghong Gao

characteristic: collected by

text: 20 cm

text: China:Guangdong Province

text: Zenghong Gao

text: forest soil

text: 23.17 N 112.53 E

text: Trinickia violacea

text: cell culture

characteristic: strain

text: Microbe sample from Burkholderia sp. DHOD12

text: type strain of Trinickia violacea


characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

text: USA

text: Pathogen.env

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: North Carolina

characteristic: collection date

text: Salmonella

characteristic: genus

text: USA:NC

text: ear (Canis lupus familiaris)

characteristic: ontological term

text: Salmonella enterica

characteristic: organism

text: animal

characteristic: source type

text: enterica

characteristic: species

text: Pathogen: environmental/food/other sample from Salmonella enterica

characteristic: title

value: broth dilution

value: Salmonella enterica

value: cephalexin

value: orbifloxacin

value: piperacillin-tazobactam

value: pradofloxacin

value: tetracycline

value: ampicillin

value: ceftazidime


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: ISUVDL

text: Escherichia

text: USA:IA

characteristic: geo loc name

text: urine (Canis lupus familiaris)

characteristic: isolation source

text: canis lupus familiaris:NCBITAXON_9615, urine:UBERON_0001088

text: Escherichia coli

text: animal

text: coli

text: Pathogen: environmental/food/other sample from Escherichia coli

value: trimethoprim-sulfamethoxazole

value: Escherichia coli

value: chloramphenicol

value: amoxicillin-clavulanic acid

value: enrofloxacin

value: marbofloxacin

value: imipenem


text: veterinary clinical/research| companion animal

characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

text: USA

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ProjectAccession

text: environmental/food/other

text: ISUVDL

characteristic: collected by

text: Escherichia

text: USA:IA

text: E-Tube (Canis lupus familiaris)

text: canis lupus familiaris:NCBITAXON_9615, dog:FOODON_03414847, tube:UBERON_0000025

text: Escherichia coli

text: animal

text: coli

characteristic: strain

value: doxycycline

value: mg/L

value: Sensititre

value: gentamicin

value: cefovecin


text: FDA Center for Food Safety and Applied Nutrition

text: live

text: USA

text: Pathogen.env

characteristic: PublicAccession

text: environmental/food/other

text: ISUVDL

characteristic: collection date

text: Escherichia

characteristic: genus

text: USA:IA

text: urine (Canis lupus familiaris)

characteristic: ontological term

text: Escherichia coli

characteristic: organism

text: animal

characteristic: source type

text: coli

characteristic: species

value: piperacillin-tazobactam

value: broth dilution

value: orbifloxacin

value: amikacin

value: cefazolin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: ISUVDL

text: Escherichia

text: USA:IA

text: urine (Canis lupus familiaris)

text: Escherichia coli

text: animal

text: coli

characteristic: title

value: trimethoprim-sulfamethoxazole

value: cephalexin


characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

text: USA

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ProjectAccession

text: environmental/food/other

text: ISUVDL

text: Escherichia

text: USA:IA

characteristic: geo loc name

text: urine (Canis lupus familiaris)

characteristic: isolation source

text: Escherichia coli

text: animal

text: coli

value: ampicillin

value: Escherichia coli

value: chloramphenicol


text: live

text: USA

text: Pathogen.env

characteristic: PublicAccession

text: environmental/food/other

text: Michigan State University VDL

characteristic: collected by

characteristic: collection date

text: Escherichia

characteristic: genus

text: USA:MI

text: urine (Canis lupus familiaris)

characteristic: ontological term

text: Escherichia coli

characteristic: organism

text: animal

text: coli

characteristic: strain

value: amoxicillin-clavulanic acid

value: cefpodoxime

value: marbofloxacin

value: pradofloxacin

value: tetracycline


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: Pathogen.env

text: environmental/food/other

text: Michigan State University VDL

text: Escherichia

text: USA:MI

text: urine (Canis lupus familiaris)

text: Escherichia coli

text: animal

characteristic: source type

text: coli

characteristic: species

value: ceftazidime

value: mg/L

value: Sensititre

value: enrofloxacin


characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

text: USA

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ProjectAccession

characteristic: SRA accession

text: environmental/food/other

text: Michigan State University VDL

text: Escherichia

text: USA:MI

text: urine (Canis lupus familiaris)

text: Escherichia coli

text: animal

text: coli

characteristic: title

value: broth dilution

value: doxycycline

value: piperacillin-tazobactam


text: live

text: USA

text: Pathogen.env

characteristic: PublicAccession

text: environmental/food/other

text: OADDL - OK

characteristic: collected by

characteristic: collection date

text: Escherichia

characteristic: genus

text: USA:OK

characteristic: geo loc name

text: urine (Canis lupus familiaris)

characteristic: isolation source

characteristic: ontological term

text: Escherichia coli

text: animal

text: coli

value: erythromycin

value: penicillin

value: rifampin

value: ceftiofur

value: clindamycin

value: ticarcillin

value: imipenem


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: Michigan State University VDL

text: Staphylococcus

text: USA:MI

text: skin (Canis lupus familiaris)

text: canis lupus familiaris:NCBITAXON_9615, zone of skin:UBERON_0000014

text: Staphylococcus pseudintermedius

characteristic: organism

text: animal

text: pseudintermedius

characteristic: strain

text: Pathogen: environmental/food/other sample from Staphylococcus pseudintermedius

value: not defined

value: CLSI

value: MIC

value: 96-Well Plate

value: Trek

value: ampicillin

value: nitrofurantoin

value: trimethoprim-sulfamethoxazole


characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ProjectAccession

text: environmental/food/other

text: OADDL - OK

text: Staphylococcus

text: USA:OK

text: nasal swab (Canis lupus familiaris)

text: canis lupus familiaris:NCBITAXON_9615| nasal:CURATION_0000466| swab:NCIT_C17627

text: Staphylococcus pseudintermedius

text: animal

characteristic: source type

text: pseudintermedius

characteristic: species

value: mg/L

value: Sensititre

value: cefazolin

value: cephalothin

value: vancomycin

value: tetracycline

value: oxacillin


text: live

text: USA

text: Pathogen.env

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: OADDL - OK

characteristic: collected by

characteristic: collection date

text: Escherichia

characteristic: genus

text: USA:OK

characteristic: geo loc name

text: thoracic fluid (Canis lupus familiaris)

text: canis lupus familiaris:NCBITAXON_9615| fluid:CURATION_0000480

text: Escherichia coli

text: animal

text: coli

characteristic: title

value: doxycycline

value: broth dilution

value: Escherichia coli

value: cefpodoxime

value: marbofloxacin

value: gentamicin

value: amikacin

value: chloramphenicol

value: amoxicillin-clavulanic acid

value: cefovecin

value: cephalexin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: Michigan State University VDL

text: Staphylococcus

text: USA:MI

text: urine (Canis lupus familiaris)

characteristic: isolation source

characteristic: ontological term

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

value: not defined

value: CLSI

value: MIC

value: 96-Well Plate

value: Trek

value: mg/L

value: Sensititre

value: erythromycin

value: rifampin


characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ProjectAccession

text: environmental/food/other

text: North Carolina

text: Staphylococcus

text: USA:NC

text: skin (Canis lupus familiaris)

text: Staphylococcus pseudintermedius

characteristic: organism

text: animal

text: pseudintermedius

characteristic: strain

value: vancomycin

value: pradofloxacin

value: penicillin

value: ampicillin

value: cefpodoxime

value: enrofloxacin


text: live

text: Pathogen.env

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: North Carolina

characteristic: collected by

characteristic: collection date

text: Staphylococcus

characteristic: genus

text: USA:NC

text: urine (Canis lupus familiaris)

text: Staphylococcus pseudintermedius

text: animal

characteristic: source type

text: pseudintermedius

characteristic: species

value: marbofloxacin

value: amikacin

value: clindamycin

value: gentamicin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: Pathogen.env

text: environmental/food/other

text: OADDL - OK

text: Escherichia

text: USA:OK

characteristic: geo loc name

text: urine (Canis lupus familiaris)

text: Escherichia coli

text: animal

text: coli

characteristic: title

value: broth dilution

value: Escherichia coli

value: orbifloxacin

value: amoxicillin-clavulanic acid

value: imipenem

value: ceftazidime

value: cefovecin

value: chloramphenicol

value: cephalexin


characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ProjectAccession

text: environmental/food/other

text: OADDL - OK

text: Staphylococcus

text: USA:OK

text: ear swab (Canis lupus familiaris)

characteristic: isolation source

text: canis lupus familiaris:NCBITAXON_9615, ear:UBERON_0001690, swab:NCIT_C17627

characteristic: ontological term

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

value: not defined

value: CLSI

value: MIC

value: 96-Well Plate

value: Trek

value: mg/L

value: Sensititre

value: nitrofurantoin

value: rifampin

value: pradofloxacin

value: tetracycline


text: live

text: Pathogen.env

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: North Carolina

characteristic: collected by

characteristic: collection date

text: Staphylococcus

characteristic: genus

text: USA:NC

text: skin (Canis lupus familiaris)

text: Staphylococcus pseudintermedius

characteristic: organism

text: animal

text: pseudintermedius

characteristic: strain

value: vancomycin

value: amikacin

value: penicillin

value: ampicillin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: Pathogen.env

text: environmental/food/other

text: OADDL - OK

text: Escherichia

text: USA:OK

text: urine (Canis lupus familiaris)

text: Escherichia coli

text: animal

characteristic: source type

text: coli

characteristic: species

value: amoxicillin-clavulanic acid

value: broth dilution

value: Escherichia coli

value: ceftazidime

value: imipenem

value: cefovecin

value: trimethoprim-sulfamethoxazole

value: chloramphenicol

value: cefazolin

value: enrofloxacin


characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ProjectAccession

text: environmental/food/other

text: Michigan State University VDL

text: Staphylococcus

text: USA:MI

characteristic: geo loc name

text: skin (Canis lupus familiaris)

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

characteristic: title

value: not defined

value: CLSI

value: MIC

value: 96-Well Plate

value: Trek

value: oxacillin

value: mg/L

value: Sensititre

value: gentamicin


text: live

text: Pathogen.env

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: OADDL - OK

characteristic: collected by

characteristic: collection date

text: Staphylococcus

characteristic: genus

text: USA:OK

text: urine (Canis lupus familiaris)

characteristic: isolation source

characteristic: ontological term

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

value: minocycline

value: marbofloxacin

value: amikacin

value: vancomycin

value: nitrofurantoin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: OADDL - OK

text: Staphylococcus

text: USA:OK

text: urine (Canis lupus familiaris)

text: Staphylococcus pseudintermedius

characteristic: organism

text: animal

text: pseudintermedius

characteristic: strain

value: erythromycin

value: amoxicillin-clavulanic acid

value: clindamycin

value: imipenem

value: penicillin

value: ampicillin


characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

text: USA

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ProjectAccession

text: environmental/food/other

text: North Carolina

text: Escherichia

text: USA:NC

text: urine (Canis lupus familiaris)

text: Escherichia coli

text: animal

characteristic: source type

text: coli

characteristic: species

value: trimethoprim-sulfamethoxazole

value: broth dilution

value: Escherichia coli

value: ceftazidime

value: pradofloxacin

value: cefovecin

value: cefazolin

value: chloramphenicol

value: piperacillin-tazobactam

value: cefpodoxime

value: enrofloxacin


text: live

text: Pathogen.env

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: ISUVDL

characteristic: collected by

characteristic: collection date

text: Staphylococcus

characteristic: genus

text: USA:IA

characteristic: geo loc name

text: nasal (Canis lupus familiaris)

text: canis lupus familiaris:NCBITAXON_9615| nasal:CURATION_0000466

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

characteristic: title

value: not defined

value: CLSI

value: MIC

value: 96-Well Plate

value: Trek

value: mg/L

value: Sensititre

value: gentamicin

value: rifampin

value: doxycycline


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: Pathogen.env

text: environmental/food/other

text: Michigan State University VDL

text: Escherichia

text: USA:MI

text: urine (Canis lupus familiaris)

characteristic: isolation source

characteristic: ontological term

text: Escherichia coli

text: animal

text: coli

value: broth dilution

value: Escherichia coli

value: orbifloxacin

value: pradofloxacin

value: ceftazidime

value: trimethoprim-sulfamethoxazole

value: marbofloxacin

value: tetracycline

value: cephalexin


characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

text: USA

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ProjectAccession

text: environmental/food/other

text: Michigan State University VDL

text: Escherichia

text: USA:MI

text: urine (Canis lupus familiaris)

text: Escherichia coli

characteristic: organism

text: animal

text: coli

characteristic: strain

value: amikacin

value: cefpodoxime

value: cefovecin

value: amoxicillin-clavulanic acid

value: enrofloxacin

value: cefazolin

value: piperacillin-tazobactam


text: live

text: Pathogen.env

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: OADDL - OK

characteristic: collected by

characteristic: collection date

text: Staphylococcus

characteristic: genus

text: USA:OK

text: skin swab (Canis lupus familiaris)

text: canis lupus familiaris:NCBITAXON_9615, swab:NCIT_C17627, zone of skin:UBERON_0000014

text: Staphylococcus pseudintermedius

text: animal

characteristic: source type

text: pseudintermedius

characteristic: species

value: not defined

value: CLSI

value: MIC

value: 96-Well Plate

value: Trek

value: mg/L

value: Sensititre

value: rifampin

value: cephalothin

value: gentamicin

value: oxacillin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: North Carolina

text: Staphylococcus

text: USA:NC

characteristic: geo loc name

text: skin (Canis lupus familiaris)

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

characteristic: title

value: minocycline

value: imipenem

value: clindamycin

value: amikacin

value: marbofloxacin


characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

text: USA

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ProjectAccession

text: environmental/food/other

text: OADDL - OK

text: Escherichia

text: USA:OK

text: joint swab (Canis lupus familiaris)

characteristic: isolation source

text: articulation:UBERON_0004905, canis lupus familiaris:NCBITAXON_9615, swab:NCIT_C17627

characteristic: ontological term

text: Escherichia coli

text: animal

text: coli

value: orbifloxacin

value: broth dilution

value: Escherichia coli

value: tetracycline

value: pradofloxacin

value: cefovecin

value: amoxicillin-clavulanic acid

value: enrofloxacin

value: doxycycline

value: ceftazidime

value: piperacillin-tazobactam

value: cefazolin


text: live

text: USA

text: Pathogen.env

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: North Carolina

characteristic: collected by

characteristic: collection date

text: Escherichia

characteristic: genus

text: USA:NC

text: urine (Canis lupus familiaris)

text: Escherichia coli

characteristic: organism

text: animal

text: coli

characteristic: strain

value: mg/L

value: Sensititre

value: gentamicin

value: cephalexin

value: trimethoprim-sulfamethoxazole

value: cefpodoxime

value: ampicillin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: ISUVDL

text: Staphylococcus

text: USA:IA

text: lesion (Canis lupus familiaris)

text: canis lupus familiaris:NCBITAXON_9615| lesion:CURATION_0000469

text: Staphylococcus pseudintermedius

text: animal

characteristic: source type

text: pseudintermedius

characteristic: species

value: not defined

value: CLSI

value: MIC

value: 96-Well Plate

value: Trek

value: amikacin

value: imipenem

value: clindamycin

value: penicillin


characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

text: USA

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ProjectAccession

text: environmental/food/other

text: North Carolina

text: Escherichia

text: USA:NC

characteristic: geo loc name

text: abscess (Canis lupus familiaris)

text: abscess:HP_0025615, canis lupus familiaris:NCBITAXON_9615, dog:FOODON_03414847

text: Escherichia coli

text: animal

text: coli

characteristic: title

value: marbofloxacin

value: broth dilution

value: Escherichia coli

value: chloramphenicol

value: orbifloxacin

value: doxycycline

value: ceftazidime

value: amoxicillin-clavulanic acid

value: tetracycline

value: pradofloxacin


text: live

text: Pathogen.env

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: ISUVDL

characteristic: collected by

characteristic: collection date

text: Staphylococcus

characteristic: genus

text: USA:IA

text: skin (Canis lupus familiaris)

characteristic: isolation source

characteristic: ontological term

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

value: not defined

value: CLSI

value: MIC

value: mg/L

value: Sensititre

value: trimethoprim-sulfamethoxazole

value: enrofloxacin

value: minocycline

value: erythromycin

value: oxacillin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: Michigan State University VDL

text: Staphylococcus

text: USA:MI

text: ear (Canis lupus familiaris)

text: canis lupus familiaris:NCBITAXON_9615, ear:UBERON_0001690

text: Staphylococcus pseudintermedius

characteristic: organism

text: animal

text: pseudintermedius

characteristic: strain

value: 96-Well Plate

value: Trek

value: cefovecin

value: vancomycin

value: gentamicin

value: clindamycin

value: imipenem


characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ProjectAccession

text: environmental/food/other

text: Michigan State University VDL

text: Staphylococcus

text: USA:MI

text: ear (Canis lupus familiaris)

text: Staphylococcus pseudintermedius

text: animal

characteristic: source type

text: pseudintermedius

characteristic: species

value: not defined

value: cephalothin

value: cefpodoxime

value: cefazolin

value: ampicillin


text: live

text: USA

text: Pathogen.env

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: North Carolina

characteristic: collected by

characteristic: collection date

text: Escherichia

characteristic: genus

text: USA:NC

characteristic: geo loc name

text: urine (Canis lupus familiaris)

text: Escherichia coli

text: animal

text: coli

characteristic: title

value: tetracycline

value: broth dilution

value: mg/L

value: Sensititre

value: Escherichia coli

value: orbifloxacin

value: cephalexin

value: marbofloxacin

value: amikacin

value: pradofloxacin

value: chloramphenicol

value: piperacillin-tazobactam

value: ceftazidime

value: amoxicillin-clavulanic acid


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: ISUVDL

text: Staphylococcus

text: USA:IA

text: eye (Canis lupus familiaris)

characteristic: isolation source

text: canis lupus familiaris:NCBITAXON_9615, eye:UBERON_0000970

characteristic: ontological term

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

value: not defined

value: CLSI

value: MIC

value: 96-Well Plate

value: Trek

value: trimethoprim-sulfamethoxazole

value: nitrofurantoin

value: rifampin


characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ProjectAccession

text: environmental/food/other

text: North Carolina

text: Staphylococcus

text: USA:NC

text: urine (Canis lupus familiaris)

text: canis lupus familiaris:NCBITAXON_9615, urine:UBERON_0001088

text: Staphylococcus pseudintermedius

characteristic: organism

text: animal

text: pseudintermedius

characteristic: strain

value: mg/L

value: Sensititre

value: cefazolin

value: cefovecin

value: imipenem

value: cephalothin


text: live

text: Pathogen.env

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: ISUVDL

characteristic: collected by

characteristic: collection date

text: Staphylococcus

characteristic: genus

text: USA:IA

text: nasal (Canis lupus familiaris)

text: Staphylococcus pseudintermedius

text: animal

characteristic: source type

text: pseudintermedius

characteristic: species

value: ampicillin

value: enrofloxacin

value: pradofloxacin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: Pathogen.env

text: environmental/food/other

text: North Carolina

text: Escherichia

text: USA:NC

characteristic: geo loc name

text: urine (Canis lupus familiaris)

text: Escherichia coli

text: animal

text: coli

text: Pathogen: environmental/food/other sample from Escherichia coli

characteristic: title

value: broth dilution

value: Escherichia coli

value: cefpodoxime

value: orbifloxacin

value: amoxicillin-clavulanic acid

value: tetracycline

value: doxycycline

value: gentamicin

value: marbofloxacin


text: veterinary clinical/research| companion animal

characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

text: USA

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ProjectAccession

text: environmental/food/other

text: PU

text: Escherichia

text: USA:IN

text: skin swab (Canis lupus familiaris)

characteristic: isolation source

characteristic: ontological term

text: Escherichia coli

text: animal

text: coli

value: mg/L

value: Sensititre

value: piperacillin-tazobactam

value: trimethoprim-sulfamethoxazole

value: chloramphenicol


text: live

text: USA

text: Pathogen.env

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: KS

characteristic: collected by

characteristic: collection date

text: Escherichia

characteristic: genus

text: USA:KS

text: urine (Canis lupus familaris)

text: Escherichia coli

characteristic: organism

text: animal

text: coli

characteristic: strain

value: imipenem

value: cefazolin

value: cephalexin

value: ceftazidime


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: Pathogen.env

text: environmental/food/other

text: PA-Ryan

text: Escherichia

text: USA:PA

text: tracheal wash (Canis lupus familiaris)

text: canis lupus familiaris:NCBITAXON_9615| trach wash:CURATION_0001489

text: Escherichia coli

text: animal

characteristic: source type

text: coli

characteristic: species

value: piperacillin

value: broth dilution

value: Escherichia coli

value: tobramycin

value: cefovecin

value: polymyxin B

value: nitrofurantoin

value: ampicillin

value: amikacin


text: Dept. Microbiology and Molecular Medicine, University of Geneva, Faculty of Medicine / CMU

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Wild type

characteristic: genotype

text: Caulobacter vibrioides CB15

text: Caulobacter crescentus culture

text: ChIP-Seq_PhoB_Caulobacter_crescentus_NA1000(WT)_GHA-531

characteristic: title


text: live

text: Generic

characteristic: SRA accession

text: [delta]pstS

text: Caulobacter vibrioides CB15

text: Caulobacter crescentus culture

text: Total-Input_PhoB_Caulobacter_crescentus_ΔpstS_GHA-542


text: live

text: Generic

text: [delta]pstS

text: Caulobacter vibrioides CB15

text: Caulobacter crescentus culture

text: ChIP-Seq_PhoB_Caulobacter_crescentus_ΔpstS_GHA-536


text: live

text: Generic

text: Wild type

text: Caulobacter vibrioides CB15

text: Caulobacter crescentus culture

text: Total-Input_PhoB_Caulobacter_crescentus_NA1000(WT)_GHA-541


characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

text: live

text: USA

text: Pathogen.env

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: OADDL - OK

characteristic: collected by

characteristic: collection date

text: Escherichia

text: USA:OK

characteristic: geo loc name

text: wound swab (Canis lupus familiaris)

characteristic: isolation source

text: canis lupus familiaris:NCBITAXON_9615| swab:NCIT_C17627| wound:CURATION_0000442

characteristic: ontological term

text: Escherichia coli

text: animal

text: coli

value: mg/L

value: Sensititre

value: gentamicin

value: pradofloxacin

value: tetracycline

value: amoxicillin-clavulanic acid


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: Pathogen.env

text: environmental/food/other

text: OADDL - OK

text: Escherichia

characteristic: genus

text: USA:OK

text: urine (Canis lupus familiaris)

text: Escherichia coli

characteristic: organism

text: animal

text: coli

characteristic: strain

value: imipenem

value: piperacillin-tazobactam

value: cephalexin

value: trimethoprim-sulfamethoxazole

value: doxycycline

value: cefazolin

value: orbifloxacin

value: marbofloxacin


characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: OADDL - OK

text: Staphylococcus

text: USA:OK

text: urine (Canis lupus familiaris)

text: Staphylococcus pseudintermedius

text: animal

characteristic: source type

text: pseudintermedius

characteristic: species

text: Pathogen: environmental/food/other sample from Staphylococcus pseudintermedius

characteristic: title

value: not defined

value: CLSI

value: MIC

value: 96-Well Plate

value: Trek

value: penicillin

value: rifampin

value: cefpodoxime

value: clindamycin

value: chloramphenicol

value: minocycline

value: nitrofurantoin


characteristic: IFSAC+ Category

text: live

text: Pathogen.env

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: OADDL - OK

characteristic: collected by

characteristic: collection date

text: Staphylococcus

text: USA:OK

characteristic: geo loc name

text: wound swab (Canis lupus familiaris)

characteristic: isolation source

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

value: trimethoprim-sulfamethoxazole

value: mg/L

value: Sensititre

value: imipenem

value: tetracycline

value: gentamicin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: North Carolina

text: Staphylococcus

characteristic: genus

text: USA:NC

text: skin (Canis lupus familiaris)

text: canis lupus familiaris:NCBITAXON_9615, zone of skin:UBERON_0000014

characteristic: ontological term

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

value: not defined

value: CLSI

value: cefovecin

value: oxacillin

value: enrofloxacin

value: amoxicillin-clavulanic acid


characteristic: INSDC secondary accession

text: live

text: USA

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: OADDL - OK

text: Escherichia

text: USA:OK

text: urine (Canis lupus familiaris)

text: Escherichia coli

characteristic: organism

text: animal

characteristic: source type

text: coli

characteristic: strain

value: piperacillin-tazobactam

value: broth dilution

value: Escherichia coli

value: cephalexin

value: ceftazidime

value: cefpodoxime

value: pradofloxacin

value: ampicillin

value: amikacin


characteristic: IFSAC+ Category

text: live

text: USA

text: Pathogen.env

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: OADDL - OK

characteristic: collected by

characteristic: collection date

text: Escherichia

text: USA:OK

text: urine (Canis lupus familiaris)

text: Escherichia coli

text: animal

text: coli

characteristic: species

characteristic: title

value: orbifloxacin

value: mg/L

value: Sensititre

value: chloramphenicol

value: cefazolin

value: marbofloxacin

value: tetracycline


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: Pathogen.env

text: environmental/food/other

text: North Carolina

text: Escherichia

text: USA:NC

characteristic: geo loc name

text: urine (Canis lupus familiaris)

characteristic: isolation source

text: Escherichia coli

text: animal

text: coli

value: trimethoprim-sulfamethoxazole

value: doxycycline

value: amoxicillin-clavulanic acid


characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: MI

text: Staphylococcus

characteristic: genus

text: USA:MI

text: urine (Canis lupus familiaris)

characteristic: ontological term

text: Staphylococcus pseudintermedius

characteristic: organism

text: animal

text: pseudintermedius

value: not defined

value: CLSI

value: MIC

value: 96-Well Plate

value: Trek

value: cephalothin

value: rifampin

value: erythromycin


characteristic: IFSAC+ Category

text: live

text: USA

text: Pathogen.env

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: MI

characteristic: collected by

characteristic: collection date

text: Escherichia

text: USA:MI

text: urine (Canis lupus familiaris)

text: Escherichia coli

text: animal

characteristic: source type

text: coli

characteristic: strain

value: piperacillin-tazobactam

value: broth dilution

value: mg/L

value: Escherichia coli

value: orbifloxacin

value: cefovecin

value: ampicillin

value: pradofloxacin

value: enrofloxacin

value: ceftazidime


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: North Carolina

text: Staphylococcus

text: USA:NC

text: tissue (Canis lupus familiaris)

text: canis lupus familiaris:NCBITAXON_9615, dog:FOODON_03414847, tissue:UBERON_0000479

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

characteristic: species

characteristic: title

value: not defined

value: CLSI

value: vancomycin

value: Sensititre

value: clindamycin

value: minocycline

value: marbofloxacin

value: oxacillin


characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: North Carolina

text: Staphylococcus

characteristic: genus

text: USA:NC

characteristic: geo loc name

text: skin (Canis lupus familiaris)

characteristic: isolation source

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

value: MIC

value: 96-Well Plate

value: Trek

value: nitrofurantoin

value: rifampin

value: amoxicillin-clavulanic acid

value: imipenem


characteristic: IFSAC+ Category

text: live

text: Pathogen.env

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: OADDL - OK

characteristic: collected by

characteristic: collection date

text: Staphylococcus

text: USA:OK

text: wound swab (Canis lupus familiaris)

characteristic: ontological term

text: Staphylococcus pseudintermedius

characteristic: organism

text: animal

text: pseudintermedius

value: mg/L


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: OADDL - OK

text: Staphylococcus

text: USA:OK

text: ear swab (Canis lupus familiaris)

text: canis lupus familiaris:NCBITAXON_9615, ear:UBERON_0001690, swab:NCIT_C17627

text: Staphylococcus pseudintermedius

text: animal

characteristic: source type

text: pseudintermedius

characteristic: strain

value: chloramphenicol

value: cefpodoxime

value: cefovecin

value: tetracycline


characteristic: INSDC secondary accession

text: live

text: USA

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: OADDL - OK

text: Escherichia

characteristic: genus

text: USA:OK

text: urine (Canis lupus familiaris)

text: Escherichia coli

text: animal

text: coli

characteristic: species

characteristic: title

value: broth dilution

value: Sensititre

value: Escherichia coli

value: trimethoprim-sulfamethoxazole

value: doxycycline

value: cephalexin

value: gentamicin

value: cefazolin

value: enrofloxacin

value: orbifloxacin


characteristic: IFSAC+ Category

text: live

text: Pathogen.env

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: OADDL - OK

characteristic: collected by

characteristic: collection date

text: Staphylococcus

text: USA:OK

characteristic: geo loc name

text: wound swab (Canis lupus familiaris)

characteristic: isolation source

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

value: not defined

value: CLSI

value: MIC

value: 96-Well Plate

value: Trek

value: amikacin

value: piperacillin-tazobactam


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: Pathogen.env

text: environmental/food/other

text: MI

text: Escherichia

text: USA:MI

text: urine (Canis lupus familiaris)

characteristic: ontological term

text: Escherichia coli

characteristic: organism

text: animal

text: coli

value: ampicillin

value: broth dilution

value: mg/L

value: ceftazidime

value: cefpodoxime

value: chloramphenicol

value: imipenem

value: tetracycline

value: marbofloxacin

value: cefovecin

value: amoxicillin-clavulanic acid


characteristic: INSDC secondary accession

text: live

text: USA

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: MI

text: Escherichia

characteristic: genus

text: USA:MI

text: urine (Canis lupus familiaris)

text: Escherichia coli

text: animal

characteristic: source type

text: coli

characteristic: strain

value: Sensititre

value: Escherichia coli

value: gentamicin

value: orbifloxacin

value: cefazolin

value: doxycycline

value: enrofloxacin


characteristic: IFSAC+ Category

text: live

text: USA

text: Pathogen.env

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: MI

characteristic: collected by

characteristic: collection date

text: Escherichia

text: USA:MI

text: urine (Canis lupus familiaris)

text: Escherichia coli

text: animal

text: coli

characteristic: species

characteristic: title

value: cephalexin

value: broth dilution

value: ampicillin

value: amikacin

value: piperacillin-tazobactam


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: North Carolina

text: Staphylococcus

text: USA:NC

characteristic: geo loc name

text: skin (Canis lupus familiaris)

characteristic: isolation source

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

value: not defined

value: CLSI

value: MIC

value: 96-Well Plate

value: Trek

value: chloramphenicol

value: mg/L

value: oxacillin

value: pradofloxacin

value: clindamycin

value: imipenem

value: cephalothin


characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: MI

text: Staphylococcus

characteristic: genus

text: USA:MI

text: surgical incision (Canis lupus familiaris)

text: canis lupus familiaris:NCBITAXON_9615| incision:CURATION_0000473| surgical:CURATION_0000451

characteristic: ontological term

text: Staphylococcus pseudintermedius

characteristic: organism

text: animal

text: pseudintermedius

value: gentamicin

value: Sensititre

value: cefpodoxime

value: marbofloxacin

value: cefazolin

value: amoxicillin-clavulanic acid


characteristic: IFSAC+ Category

text: live

text: Pathogen.env

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: ISUVDL

characteristic: collected by

characteristic: collection date

text: Staphylococcus

text: USA:IA

text: wound swab (Canis lupus familiaris)

text: Staphylococcus pseudintermedius

text: animal

characteristic: source type

text: pseudintermedius

characteristic: strain

value: not defined

value: CLSI

value: rifampin

value: tetracycline

value: penicillin

value: ampicillin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: MI

text: Staphylococcus

text: USA:MI

text: Staphylococcus pseudintermedius

text: animal

text: pseudintermedius

characteristic: species

characteristic: title

value: MIC

value: 96-Well Plate

value: Trek

value: mg/L

value: vancomycin

value: erythromycin

value: nitrofurantoin


characteristic: INSDC secondary accession

text: live

text: USA

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: North Carolina

text: Escherichia

characteristic: genus

text: USA:NC

characteristic: geo loc name

text: skin (Canis lupus familiaris)

characteristic: isolation source

text: Escherichia coli

text: animal

text: coli

value: cefpodoxime

value: broth dilution

value: Sensititre

value: Escherichia coli

value: piperacillin-tazobactam

value: cephalexin

value: amikacin

value: trimethoprim-sulfamethoxazole

value: imipenem

value: gentamicin

value: ceftazidime

value: cefovecin


characteristic: IFSAC+ Category

text: live

text: Pathogen.env

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: North Carolina

characteristic: collected by

characteristic: collection date

text: Staphylococcus

text: USA:NC

text: skin (Canis lupus familiaris)

characteristic: ontological term

text: Staphylococcus pseudintermedius

characteristic: organism

text: animal

text: pseudintermedius

value: not defined

value: CLSI

value: MIC

value: 96-Well Plate

value: Trek

value: amoxicillin-clavulanic acid

value: oxacillin

value: marbofloxacin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: Pathogen.env

text: environmental/food/other

text: North Carolina

text: Escherichia

text: USA:NC

text: urine (Canis lupus familiaris)

text: canis lupus familiaris:NCBITAXON_9615, urine:UBERON_0001088

text: Escherichia coli

text: animal

characteristic: source type

text: coli

characteristic: strain

value: broth dilution

value: mg/L

value: Sensititre

value: Escherichia coli

value: pradofloxacin

value: enrofloxacin

value: chloramphenicol

value: orbifloxacin

value: cefazolin


characteristic: INSDC secondary accession

text: live

text: USA

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: MI

text: Escherichia

characteristic: genus

text: USA:MI

text: urine (Canis lupus familiaris)

text: Escherichia coli

text: animal

text: coli

characteristic: species

text: Pathogen: environmental/food/other sample from Escherichia coli

characteristic: title

value: doxycycline

value: piperacillin-tazobactam

value: amikacin

value: cefovecin

value: gentamicin

value: imipenem