text: University of Florida

text: live

text: MIGS.ba

characteristic: Tax ID

text: Surface

characteristic: depth

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: Wetland water

text: Coastal

text: Surface water

text: USA

text: Dilution-to-Extinction, Filtered seawater

characteristic: isolate

text: 25.176929 N 80.489782 W

text: Pelagibacterales bacterium CODY6

text: Atypical distribution of SAR11 ecotypes in highly connected wetlands with strong salinity gradients

text: missing

text: MIGS Cultured Bacterial/Archaeal sample from Pelagibacterales bacterium CODY6


name: Extraintestinal Escherichia coli 14_C.B._LAU

status: PUBLIC

characteristic: External Id

text: Lebanese American University Microbial Pathogenomics Lab

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

tag: attribute

text: Lebanon: Byblos

text: Homo sapiens

characteristic: host

text: blood

text: Extraintestinal Escherichia coli

characteristic: note

text: missing

characteristic: note original ID

text: Escherichia coli

characteristic: organism

text: Blood

characteristic: strain

text: Microbe sample from Escherichia coli

characteristic: title


213_23.4Gy/h 24hrs rep B

text: Stockholm university

characteristic: INSDC secondary accession

text: live

text: Human

characteristic: SRA accession

text: Not applicable

characteristic: age

text: Not applicable

text: VH10 fibroblasts

text: Fibroblasts

text: Sweden

text: Not applicable

text: Homo sapiens

text: male

characteristic: sex

text: Not applicable

characteristic: tissue

text: Human sample from Homo sapiens

text: irradiation

characteristic: treatment


name: Extraintestinal Escherichia coli 5_C.B._LAU

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: Lebanon: Byblos

text: Homo sapiens

text: blood

text: Extraintestinal Escherichia coli

text: missing

text: Escherichia coli

text: Blood

text: Microbe sample from Escherichia coli


Morganella morganii 1_C.B._LAU

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: Lebanon: Byblos

text: Homo sapiens

text: blood

text: Morganella morganii

text: Blood

text: Microbe sample from Morganella morganii


214_23.4Gy/h 21d rep B

text: Stockholm university

text: live

text: Human

characteristic: NCBI submission package

text: Not applicable

text: Not applicable

text: VH10 fibroblasts

text: Fibroblasts

text: Sweden

text: Not applicable

characteristic: isolate

text: Homo sapiens

text: male

text: Not applicable

text: Human sample from Homo sapiens

text: irradiation


name: Extraintestinal Escherichia coli 15_C.B._LAU

text: live

text: Microbe, viral or environmental

text: Lebanon: Byblos

text: Homo sapiens

characteristic: host

text: blood

text: Extraintestinal Escherichia coli

characteristic: note

text: missing

characteristic: note original ID

text: Escherichia coli

characteristic: organism

text: Blood

text: Microbe sample from Escherichia coli


name: Extraintestinal Escherichia coli 8_C.B._LAU

text: live

text: Microbe, viral or environmental

text: Lebanon: Byblos

text: Homo sapiens

text: blood

text: Extraintestinal Escherichia coli

text: CBEc 10

text: Escherichia coli

text: Blood

characteristic: strain

text: Microbe sample from Escherichia coli

characteristic: title


text: Biobot Analytics

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: wastewater surveillance

characteristic: SRA accession

text: Biobot Analytics

text: ceres nanotrap

text: thermo magmax microbiome ultra nucleic acid isolation kit

text: USA: Pennsylvania

text: wastewater

text: wastewater metagenome

text: public health surveillance community-level

text: Ginkgo Bioworks clinical laboratory

text: SARS-CoV-2: wastewater surveillance sample from wastewater metagenome

text: Pasteurized; virus captured with Ceres NanoTrap particles; nucleic acid extracted with MagMAX DNA/RNA binding beads

text: raw wastewater

text: wastewater treatment plant

text: composite

text: pa

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Pennsylvania

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: post grit removal

text: wastewater treatment plant

text: composite

text: pa

text: yes


name: Extraintestinal Escherichia coli 2_C.B._LAU

text: live

text: Microbe, viral or environmental

text: Lebanon: Byblos

text: Homo sapiens

text: blood

text: Extraintestinal Escherichia coli

text: CBEc 2

text: Escherichia coli

text: Blood

text: Microbe sample from Escherichia coli


Proteus mirabilis 1_C.B._LAU

text: live

text: Microbe, viral or environmental

text: Lebanon: Byblos

text: Homo sapiens

text: blood

text: Proteus mirabilis

text: Blood

text: Microbe sample from Proteus mirabilis


Pseudomonas phage UF_RH7

text: University of Florida

text: live

text: MIGS.vi

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: USA:Florida

text: 37 degree and cultured on Pseudomonas aeruginosa

text: Pseudomonas phage

text: 25.4228 N 80.3346 W

text: Pseudomonas phage UF_RH7

text: lytic

characteristic: propagation

text: MIGS Viral sample from Pseudomonas phage UF_RH7


Klebsiella pneumoniae 4_C.B._LAU

characteristic: External Id

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: Lebanon: Byblos

text: Homo sapiens

text: blood

text: CBKp 4

text: Klebsiella pneumoniae

text: Blood

text: Microbe sample from Klebsiella pneumoniae


215_12 mGy/h 24h rep B

text: Stockholm university

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Human

text: Not applicable

characteristic: age

text: Not applicable

text: VH10 fibroblasts

text: Fibroblasts

text: Sweden

text: Not applicable

text: Homo sapiens

text: male

characteristic: sex

text: Not applicable

characteristic: tissue

text: Human sample from Homo sapiens

text: irradiation

characteristic: treatment


216_12 mGy/h 21d rep B

text: Stockholm university

text: live

characteristic: INSDC status

text: Human

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Not applicable

text: Not applicable

text: VH10 fibroblasts

text: Fibroblasts

text: Sweden

text: Not applicable

characteristic: isolate

text: Homo sapiens

text: male

text: Not applicable

text: Human sample from Homo sapiens

text: irradiation


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Texas

text: wastewater

text: wastewater metagenome

characteristic: organism

text: Ginkgo Bioworks clinical laboratory

characteristic: title

text: raw wastewater

text: wastewater treatment plant

text: grab

text: tx

text: yes


text: Biobot Analytics

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: wastewater surveillance

characteristic: SRA accession

text: Biobot Analytics

text: ceres nanotrap

text: USA: Alabama

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: grab

text: al

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Arkansas

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: post grit removal

text: wastewater treatment plant

text: composite

text: ar

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Vermont

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: vt

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Florida

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: fl

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Kansas

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: ks

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: California

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: ca

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Oklahoma

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: ok

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Washington

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: post grit removal

text: wastewater treatment plant

text: composite

text: wa

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Texas

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: tx

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Maryland

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: md

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Indiana

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: in

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Texas

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: post grit removal

text: wastewater treatment plant

text: composite

text: tx

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: North Carolina

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: nc

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: New Mexico

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: grab

text: nm

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Louisiana

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: la

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: New Hampshire

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: nh

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: California

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: grab

text: ca

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Alabama

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: al

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Arkansas

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: ar

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Kansas

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: grab

text: ks

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Florida

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: fl

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Tennessee

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: post grit removal

text: wastewater treatment plant

text: composite

text: tn

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Nevada

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: nv

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Arkansas

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: post grit removal

text: wastewater treatment plant

text: composite

text: ar

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Washington

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: post grit removal

text: wastewater treatment plant

text: composite

text: wa

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Kansas

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: ks

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Texas

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: grab

text: tx

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: South Carolina

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: sc

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Texas

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: tx

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Washington

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: wa

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Iowa

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: ia

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Texas

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: post grit removal

text: wastewater treatment plant

text: composite

text: tx

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Massachusetts

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: ma

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Montana

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: mt

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Alaska

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: grab

text: ak

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Indiana

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: in

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Virginia

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: grab

text: va

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: California

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: ca

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: New Mexico

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: grab

text: nm

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Maine

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: me

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Pennsylvania

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: pa

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: South Dakota

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: sd

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Maryland

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: post grit removal

text: wastewater treatment plant

text: composite

text: md

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Kansas

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: ks

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Connecticut

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: ct

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Illinois

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: il

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Maine

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: post grit removal

text: wastewater treatment plant

text: composite

text: me

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Maryland

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: md

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Georgia

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: ga

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Nevada

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: nv

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Vermont

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: grab

text: vt

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Texas

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: tx

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Iowa

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: ia

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: California

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: post grit removal

text: wastewater treatment plant

text: composite

text: ca

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: California

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: ca

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Tennessee

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: tn

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Arkansas

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: post grit removal

text: wastewater treatment plant

text: grab

text: ar

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: North Carolina

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: post grit removal

text: wastewater treatment plant

text: composite

text: nc

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

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text: Biobot Analytics

text: ceres nanotrap

text: USA: Arkansas

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: ar

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Arkansas

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: post grit removal

text: wastewater treatment plant

text: composite

text: ar

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Hawaii

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: hi

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: New York

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: post grit removal

text: wastewater treatment plant

text: composite

text: nz

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: New York

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: nz

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Maine

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: grab

text: me

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Maryland

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: md

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Hawaii

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: grab

text: hi

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: California

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: ca

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Louisiana

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: la

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Arkansas

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: grab

text: ar

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Virginia

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: post grit removal

text: wastewater treatment plant

text: composite

text: va

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Washington

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: wa

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Iowa

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: grab

text: ia

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Florida

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: post grit removal

text: wastewater treatment plant

text: composite

text: fl

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Texas

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: grab

text: tx

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Vermont

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: vt

text: yes


217_8mGy/h 24h rep B

text: Stockholm university

text: live

text: Human

text: Not applicable

text: Not applicable

text: VH10 fibroblasts

text: Fibroblasts

text: Sweden

text: Not applicable

text: Homo sapiens

text: male

text: Not applicable

text: Human sample from Homo sapiens

text: irradiation


text: Wadsworth Center

text: live

text: Pathogen.cl

text: missing

text: USA:NY

text: Homo sapiens

characteristic: host

text: Tuberculosis

text: Tissue

text: missing

text: Mycobacterium tuberculosis

text: Pathogen: clinical or host-associated sample from Mycobacterium tuberculosis


characteristic: External Id

text: Wadsworth Center

text: live

text: Pathogen.cl

text: missing

text: USA:NY

text: Homo sapiens

text: Tuberculosis

text: lymph node

text: missing

text: Mycobacterium tuberculosis


218_8mGy/h 21d rep B

text: Stockholm university

characteristic: INSDC center name

text: live

text: Human

text: Not applicable

text: Not applicable

text: VH10 fibroblasts

text: Fibroblasts

text: Sweden

text: Not applicable

text: Homo sapiens

text: male

text: Not applicable

text: Human sample from Homo sapiens

text: irradiation


Pooled AmpliconSeq of TetO2 1

text: University of Zurich

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: Replicate 1

characteristic: Replicate

text: Switzerland: Zurich

text: Homo sapiens

text: Escherichia coli

text: PCR amplified from plasmid

characteristic: strain

text: Pooled AmpliconSeq_TetR_1


Pooled AmpliconSeq of TetO2 2

text: University of Zurich

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Replicate 2

text: Switzerland: Zurich

text: Homo sapiens

text: Escherichia coli

text: PCR amplified from plasmid

text: Pooled AmpliconSeq_TetR_2


Pooled AmpliconSeq of TetO2 3

text: University of Zurich

text: live

text: Microbe, viral or environmental

text: Replicate 3

text: Switzerland: Zurich

text: Homo sapiens

text: Escherichia coli

text: PCR amplified from plasmid

text: Pooled AmpliconSeq_TetR_3


text: PulseNet Next Generation Subtyping Methods Unit

text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Campylobacter jejuni

text: missing

characteristic: serovar

text: Campylobacter jejuni


219_1.6mGy/h 24h rep C

text: Stockholm university

text: live

text: Human

text: Not applicable

characteristic: age

text: Not applicable

text: VH10 fibroblasts

text: Fibroblasts

text: Sweden

text: Not applicable

text: Homo sapiens

text: male

characteristic: sex

text: Not applicable

characteristic: tissue

text: Human sample from Homo sapiens

text: irradiation

characteristic: treatment


220_1.6mGy/h 21d rep B

text: Stockholm university

text: live

characteristic: INSDC status

text: Human

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Not applicable

text: Not applicable

text: VH10 fibroblasts

text: Fibroblasts

text: Sweden

text: Not applicable

characteristic: isolate

text: Homo sapiens

text: male

text: Not applicable

text: Human sample from Homo sapiens

text: irradiation


221_Con24hrs repC

text: Stockholm university

characteristic: INSDC secondary accession

text: live

text: Human

characteristic: SRA accession

text: Not applicable

text: Not applicable

text: VH10 fibroblasts

text: Fibroblasts

text: Sweden

text: Not applicable

text: Homo sapiens

characteristic: organism

text: male

text: Not applicable

text: Human sample from Homo sapiens

characteristic: title

text: irradiation


222_Con 21days rep C

characteristic: External Id

text: Stockholm university

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Human

text: Not applicable

text: Not applicable

text: VH10 fibroblasts

text: Fibroblasts

text: Sweden

text: Not applicable

text: Homo sapiens

text: male

text: Not applicable

text: Human sample from Homo sapiens

text: irradiation


characteristic: INSDC last update

text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

characteristic: host

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

characteristic: strain

text: Salmonella enterica


text: live

text: Pathogen.cl

text: CDC

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

characteristic: serovar

text: Salmonella enterica


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Needs further review

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Montevideo

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: enteritidis

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Javiana

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Give

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Newport

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Typhimurium

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: muenchen

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Braenderup

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Rubislaw

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

text: SC

text: USA:SC

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: South Carolina Department of Health and Environmental Control

text: Rubislaw

text: missing

text: Salmonella enterica


text: live

text: Pathogen.cl

text: SC

text: USA:SC

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: Newport

text: missing

text: Salmonella enterica


text: live

text: Pathogen.cl

text: SC

text: USA:SC

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: Inverness

text: missing

text: Salmonella enterica


text: live

text: Pathogen.cl

text: SC

text: USA:NC

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: Javiana

text: missing

text: Salmonella enterica


text: live

text: Pathogen.cl

text: SC

text: USA:SC

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: Braenderup

text: missing

text: Salmonella enterica


text: Noguchi Memorial Institute for Medical Research

text: live

text: Microbe, viral or environmental

text: Ghana

text: Homo sapiens

text: Clinical sources

text: Escherichia coli

text: whole organism

text: Microbe sample from Escherichia coli


text: live

text: Microbe, viral or environmental

text: Ghana

text: water

text: Escherichia coli

text: whole organism

text: Microbe sample from Escherichia coli


text: live

text: Microbe, viral or environmental

text: Ghana

text: animal

text: Caecal swabs

text: Escherichia coli

text: whole organism

text: Microbe sample from Escherichia coli


text: live

text: Microbe, viral or environmental

text: Ghana

text: Homo sapiens

text: Caecal swabs

text: Escherichia coli

text: whole organism

text: Microbe sample from Escherichia coli


text: NIH/NIDCR

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Oral microbial communities derived from mice:M1844B3

characteristic: description

text: environmental system determined by an organism ENVO:01001000

text: not applicable

text: saliva material ENVO:02000036

text: USA:MD

text: Mus musculus

text: 37.0902 N 95.7129 W

text: mouse metagenome

characteristic: replicate

text: ABX combo 24h after LIP:M1844B3

text: Illumina MiSeq

text: ABX combo 24h after LIP:M1844B3


text: NIH/NIDCR

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Oral microbial communities derived from mice:M1844B2

text: not applicable

text: saliva material ENVO:02000036

text: USA:MD

text: Mus musculus

text: 37.0902 N 95.7129 W

text: mouse metagenome

text: ABX combo 24h after LIP:M1844B2

text: Illumina MiSeq

text: ABX combo 24h after LIP:M1844B2


text: NIH/NIDCR

text: live

text: MIGS/MIMS/MIMARKS.host-associated

characteristic: NCBI submission model

text: MIMARKS.survey

text: Oral microbial communities derived from mice:M1844B1

text: not applicable

text: saliva material ENVO:02000036

text: USA:MD

text: Mus musculus

text: 37.0902 N 95.7129 W

text: mouse metagenome

text: ABX combo 24h after LIP:M1844B1

text: Illumina MiSeq

text: ABX combo 24h after LIP:M1844B1


text: NIH/NIDCR

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

characteristic: NCBI submission package

text: Oral microbial communities derived from mice:M1844A3

text: not applicable

text: saliva material ENVO:02000036

text: USA:MD

text: Mus musculus

text: 37.0902 N 95.7129 W

text: mouse metagenome

text: Control 24h after LIP:M1844A3

text: Illumina MiSeq

text: Control 24h after LIP:M1844A3


text: NIH/NIDCR

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Oral microbial communities derived from mice:M1844A2

text: not applicable

text: saliva material ENVO:02000036

text: USA:MD

text: Mus musculus

text: 37.0902 N 95.7129 W

text: mouse metagenome

text: Control 24h after LIP:M1844A2

text: Illumina MiSeq

text: Control 24h after LIP:M1844A2


text: NIH/NIDCR

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Oral microbial communities derived from mice:M1844A1

text: not applicable

text: saliva material ENVO:02000036

text: USA:MD

text: Mus musculus

text: 37.0902 N 95.7129 W

text: mouse metagenome

text: Control 24h after LIP:M1844A1

text: Illumina MiSeq

text: Control 24h after LIP:M1844A1


text: NIH/NIDCR

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Oral microbial communities derived from mice:M1841A3

text: not applicable

text: saliva material ENVO:02000036

text: USA:MD

text: Mus musculus

text: 37.0902 N 95.7129 W

text: mouse metagenome

text: Control baseline:M1841A3

text: Illumina MiSeq

text: Control baseline:M1841A3


text: NIH/NIDCR

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Oral microbial communities derived from mice:M1841A2

text: not applicable

text: saliva material ENVO:02000036

text: USA:MD

text: Mus musculus

text: 37.0902 N 95.7129 W

text: mouse metagenome

text: Control baseline:M1841A2

text: Illumina MiSeq

text: Control baseline:M1841A2


text: NIH/NIDCR

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Oral microbial communities derived from mice:M1841A1

text: not applicable

text: saliva material ENVO:02000036

text: USA:MD

text: Mus musculus

text: 37.0902 N 95.7129 W

text: mouse metagenome

text: Control baseline:M1841A1

text: Illumina MiSeq

text: Control baseline:M1841A1


text: NIH/NIDCR

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Oral microbial communities derived from mice:M1834B3

text: not applicable

text: saliva material ENVO:02000036

text: USA:MD

text: Mus musculus

text: 37.0902 N 95.7129 W

text: mouse metagenome

text: ABX combo 24h after LIP:M1834B3

text: Illumina MiSeq

text: ABX combo 24h after LIP:M1834B3


text: NIH/NIDCR

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Oral microbial communities derived from mice:M1834B2

text: not applicable

text: saliva material ENVO:02000036

text: USA:MD

text: Mus musculus

text: 37.0902 N 95.7129 W

text: mouse metagenome

text: ABX combo 24h after LIP:M1834B2

text: Illumina MiSeq

text: ABX combo 24h after LIP:M1834B2


text: NIH/NIDCR

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Oral microbial communities derived from mice:M1834B1

text: not applicable

text: saliva material ENVO:02000036

text: USA:MD

text: Mus musculus

text: 37.0902 N 95.7129 W

text: mouse metagenome

text: ABX combo 24h after LIP:M1834B1

text: Illumina MiSeq

text: ABX combo 24h after LIP:M1834B1


text: NIH/NIDCR

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Oral microbial communities derived from mice:M1834A3

text: not applicable

text: saliva material ENVO:02000036

text: USA:MD

text: Mus musculus

text: 37.0902 N 95.7129 W

text: mouse metagenome

text: Control 24h after LIP:M1834A3

text: Illumina MiSeq

text: Control 24h after LIP:M1834A3


text: NIH/NIDCR

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Oral microbial communities derived from mice:M1834A2

text: not applicable

text: saliva material ENVO:02000036

text: USA:MD

text: Mus musculus

text: 37.0902 N 95.7129 W

text: mouse metagenome

text: Control 24h after LIP:M1834A2

text: Illumina MiSeq

text: Control 24h after LIP:M1834A2


text: NIH/NIDCR

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Oral microbial communities derived from mice:M1834A1

text: not applicable

text: saliva material ENVO:02000036

text: USA:MD

text: Mus musculus

text: 37.0902 N 95.7129 W

text: mouse metagenome

text: Control 24h after LIP:M1834A1

text: Illumina MiSeq

text: Control 24h after LIP:M1834A1


text: NIH/NIDCR

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Oral microbial communities derived from mice:M1831A3

text: not applicable

text: saliva material ENVO:02000036

text: USA:MD

text: Mus musculus

text: 37.0902 N 95.7129 W

text: mouse metagenome

text: Control baseline:M1831A3

text: Illumina MiSeq

text: Control baseline:M1831A3


text: NIH/NIDCR

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Oral microbial communities derived from mice:M1831A2

text: not applicable

text: saliva material ENVO:02000036

text: USA:MD

text: Mus musculus

text: 37.0902 N 95.7129 W

text: mouse metagenome

text: Control baseline:M1831A2

text: Illumina MiSeq

text: Control baseline:M1831A2


text: NIH/NIDCR

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Oral microbial communities derived from mice:M1831A1

text: environmental system determined by an organism ENVO:01001000

text: not applicable

text: saliva material ENVO:02000036

text: USA:MD

text: Mus musculus

text: 37.0902 N 95.7129 W

text: mouse metagenome

text: Control baseline:M1831A1

text: Illumina MiSeq

text: Control baseline:M1831A1


text: PulseNet Next Generation Subtyping Methods Unit

text: live

text: Pathogen.cl

text: CDC

text: missing

text: USA

text: missing

text: missing

text: missing

characteristic: isolate

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: Salmonella enterica


characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

text: SC

text: USA:SC

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: South Carolina Department of Health and Environmental Control

text: Saintpaul

text: missing

text: Salmonella enterica


text: live

text: Pathogen.cl

characteristic: SRA accession

text: SC

text: USA:SC

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: Newport

text: missing

text: Salmonella enterica


text: live

text: Pathogen.cl

text: SC

text: USA:SC

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

characteristic: organism

text: missing

text: Javiana

text: missing

text: Salmonella enterica


text: live

text: Pathogen.cl

text: SC

text: USA:SC

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: Paratyphi B var. L(+) tartrate+

text: missing

text: Salmonella enterica

characteristic: title


characteristic: External Id

text: live

text: Pathogen.cl

text: SC

text: USA:VA

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: Newport

text: missing

text: Salmonella enterica


characteristic: INSDC center name

text: live

text: Pathogen.cl

text: SC

text: USA:SC

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: Bareilly

text: missing

text: Salmonella enterica


characteristic: INSDC first public

text: live

text: Pathogen.cl

text: SC

text: USA:SC

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: Gaminara

text: missing

text: Salmonella enterica


characteristic: INSDC last update

text: live

text: Pathogen.cl

text: SC

text: USA:SC

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: Mississippi

text: missing

text: Salmonella enterica


text: live

text: Pathogen.cl

text: CDC

text: missing

text: USA

text: missing

characteristic: host

text: missing

text: missing

text: missing

text: missing

text: missing

text: Escherichia coli

text: missing

text: Escherichia coli


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: I 4:i:-

characteristic: strain

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: enteritidis

characteristic: serovar

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: Braenderup

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: Oranienburg

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: Stanley

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: Corvallis

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: Salmonella enterica


text: live

text: Pathogen.cl

text: CDC

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Listeria monocytogenes

text: missing

text: Listeria monocytogenes


text: University of Jyväskylä

text: live

text: Generic

text: male

characteristic: Sex

text: 11-14 weeks old

characteristic: age

text: mononuclear cells

characteristic: cell type

text: missing

text: missing

text: Mus musculus

text: TA muscle (four muscles pooled)

text: tibialis anterior muscle

characteristic: tissue

text: TA muscle (four muscles pooled)

text: Muscle, rAAV, VEGF-B+Pro-MSTN

text: rAAV-VEGF-B+Pro-MSTN

characteristic: treatment


text: University of Jyväskylä

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: male

text: 11-14 weeks old

text: mononuclear cells

text: missing

text: missing

text: Mus musculus

text: TA muscle (four muscles pooled)

text: tibialis anterior muscle

text: TA muscle (four muscles pooled)

text: Muscle, rAAV, Pro-MSTN

text: rAAV-Pro-MSTN


text: University of Jyväskylä

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: male

text: 11-14 weeks old

text: mononuclear cells

text: missing

text: missing

text: Mus musculus

characteristic: organism

text: TA muscle (four muscles pooled)

text: tibialis anterior muscle

text: TA muscle (four muscles pooled)

text: Muscle, rAAV, VEGF-B

text: rAAV-VEGF-B


characteristic: External Id

text: University of Jyväskylä

characteristic: INSDC center name

text: live

text: Generic

text: male

text: 11-14 weeks old

text: mononuclear cells

text: missing

text: missing

text: Mus musculus

text: TA muscle (four muscles pooled)

text: tibialis anterior muscle

text: TA muscle (four muscles pooled)

text: Muscle, rAAV, CTRL

characteristic: title

text: rAAV-CTRL


223_23.4Gy/h 24hrs rep C

text: Stockholm university

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Human

text: Not applicable

text: Not applicable

text: VH10 fibroblasts

text: Fibroblasts

text: Sweden

text: Not applicable

characteristic: isolate

text: Homo sapiens

text: male

characteristic: sex

text: Not applicable

text: Human sample from Homo sapiens

text: irradiation


224_23.4Gy/h 21d rep C

text: Stockholm university

text: live

text: Human

text: Not applicable

characteristic: age

text: Not applicable

text: VH10 fibroblasts

text: Fibroblasts

text: Sweden

text: Not applicable

text: Homo sapiens

text: male

text: Not applicable

text: Human sample from Homo sapiens

text: irradiation


225_12mGy/h 24h rep C

text: Stockholm university

text: live

text: Human

text: Not applicable

text: Not applicable

text: VH10 fibroblasts

text: Fibroblasts

text: Sweden

text: Not applicable

text: Homo sapiens

text: male

text: Not applicable

text: Human sample from Homo sapiens

text: irradiation


text: Univeristy of Georgia

text: live

text: Plant

text: missing

characteristic: cultivar

text: mature

characteristic: genotype

text: USA: Athens, GA

text: Zea mays

text: flag leaf tip

text: Plant sample from Zea mays


wildtype

text: Univeristy of Georgia

text: live

text: Plant

text: missing

text: mature

text: USA: Athens, GA

text: Zea mays

text: flag leaf tip

characteristic: tissue

text: Plant sample from Zea mays


text: Univeristy of Georgia

text: live

characteristic: INSDC status

text: Plant

text: missing

text: seedling leaf

text: Ab10-Df(K) Homozygous

text: USA: Athens, GA

text: Zea mays

text: leaf tip

text: Plant sample from Zea mays


text: Univeristy of Georgia

text: live

text: Plant

characteristic: NCBI submission model

text: missing

text: Unknown

text: seedling leaf

text: Ab10-Df(M) Homozygous

text: USA: Athens, GA

text: Zea mays

text: leaf tip

text: Plant sample from Zea mays


text: Univeristy of Georgia

text: live

text: Plant

characteristic: NCBI submission package

text: missing

text: seedling leaf

text: Ab10-Df(L) Homozygous

text: USA: Athens, GA

text: Zea mays

text: leaf tip

text: Plant sample from Zea mays


text: Univeristy of Georgia

characteristic: INSDC secondary accession

text: live

text: Plant

text: missing

text: seedling leaf

text: Ab10 Homozygous

text: USA: Athens, GA

text: Zea mays

text: leaf tip

text: Plant sample from Zea mays


226_12mGy/h 21d rep C

text: Stockholm university

text: live

text: Human

characteristic: SRA accession

text: Not applicable

text: Not applicable

text: VH10 fibroblasts

text: Fibroblasts

text: Sweden

text: Not applicable

text: Homo sapiens

text: male

text: Not applicable

text: Human sample from Homo sapiens

text: irradiation

characteristic: treatment


227_8 mGy/h 24h rep C

characteristic: External Id

text: Stockholm university

text: live

text: Human

text: Not applicable

text: Not applicable

text: VH10 fibroblasts

text: Fibroblasts

text: Sweden

text: Not applicable

text: Homo sapiens

characteristic: organism

text: male

text: Not applicable

text: Human sample from Homo sapiens

text: irradiation


text: Virginia Division of Consolidated Laboratory Services Sequencing Submission Group

characteristic: INSDC center name

text: live

text: Pathogen.cl

text: USA

text: Homo sapiens

characteristic: host

text: not provided

text: blood

text: not provided

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: Pathogen: clinical or host-associated sample from Escherichia coli

characteristic: title


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.cl

text: USA

text: Homo sapiens

text: not provided

characteristic: isolate

text: blood

text: not provided

text: Acinetobacter baumannii

text: Pathogen: clinical or host-associated sample from Acinetobacter baumannii


228_8 mGy/h 21d rep C

text: Stockholm university

text: live

text: Human

text: Not applicable

characteristic: age

text: Not applicable

text: VH10 fibroblasts

text: Fibroblasts

text: Sweden

text: Not applicable

text: Homo sapiens

text: male

characteristic: sex

text: Not applicable

characteristic: tissue

text: Human sample from Homo sapiens

text: irradiation


text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Escherichia coli

text: missing

text: Escherichia coli


characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

characteristic: SRA accession

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Escherichia coli

text: Escherichia coli


characteristic: External Id

text: live

text: Pathogen.cl

text: CDC

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

characteristic: organism

text: missing

text: Salmonella enterica


characteristic: INSDC center name

text: live

text: Pathogen.cl

text: CDC

text: missing

text: missing

characteristic: host

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: Salmonella enterica


229_1.6mGy/h 24h rep C

text: Stockholm university

text: live

text: Human

text: Not applicable

text: Not applicable

text: VH10 fibroblasts

text: Fibroblasts

text: Sweden

text: Not applicable

text: Homo sapiens

text: male

text: Not applicable

text: Human sample from Homo sapiens

text: irradiation

characteristic: treatment


230_1.6mGy/h 21d rep C

text: Stockholm university

text: live

text: Human

text: Not applicable

text: Not applicable

text: VH10 fibroblasts

text: Fibroblasts

text: Sweden

text: Not applicable

text: Homo sapiens

text: male

text: Not applicable

text: Human sample from Homo sapiens

characteristic: title

text: irradiation


characteristic: INSDC first public

text: live

text: Pathogen.cl

text: CDC

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Shigella sonnei

text: missing

characteristic: serovar

characteristic: strain

text: Shigella sonnei


characteristic: INSDC last update

text: live

text: Pathogen.cl

text: CDC

text: missing

text: USA

text: missing

text: missing

text: missing

characteristic: isolate

text: missing

text: missing

text: missing

text: Escherichia coli

text: missing

text: Escherichia coli


text: live

text: Pathogen.cl

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Infantis

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Newport

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Senftenberg

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Montevideo

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Typhimurium

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: enteritidis

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Oranienburg

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Saintpaul

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Kentucky

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Thompson

text: human

text: Salmonella enterica


text: Texas Department of State Health Services-ARLN/HAI-Seq submission group

text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: missing

text: wound

text: Acinetobacter baumannii

text: whole organism

text: Microbe sample from Acinetobacter baumannii


text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: missing

text: urine

text: Klebsiella pneumoniae

text: whole organism

text: Microbe sample from Klebsiella pneumoniae


text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: missing

text: sputum

text: Acinetobacter baumannii

text: whole organism


text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: missing

text: urine

text: Escherichia coli

text: whole organism

text: Microbe sample from Escherichia coli


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: Shigella sonnei

text: Shigella sonnei


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: Shigella flexneri

text: Shigella flexneri


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: Escherichia coli

text: Escherichia coli


text: Kazan Federal University

text: live

text: Microbe, viral or environmental

text: Russia: Romashkino field

text: not applicable

text: crude oil from Romashkino Field

text: Bacillus pumilus

text: Microbial Cell Culture

text: Oil bacteria


text: Kazan Federal University

text: live

text: Microbe, viral or environmental

text: Russia: Romashkino field

text: not applicable

text: crude oil from Romashkino Field

text: Peribacillus simplex

text: Microbial Cell Culture

text: Oil bacteria


text: Centers for Disease Control and Prevention Enteric Diseases Laboratory Branch

text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Vibrio vulnificus

text: PulseNet

text: missing

text: missing

text: human

text: Vibrio vulnificus


text: Lawrence Berkeley National Laboratory

text: live

text: Microbe, viral or environmental

text: USA: San Francisco

text: soil

text: Halomonas sp. I1

text: pure culture

text: Microbe sample from Halomonas sp. I1


text: Lawrence Berkeley National Laboratory

text: live

text: Microbe, viral or environmental

text: USA: San Francisco

text: soil

text: Halomonas saccharevitans

text: pure culture

text: Microbe sample from Halomonas saccharevitans


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Campylobacter upsaliensis

text: missing

text: Campylobacter upsaliensis


text: The Weizmann Institute of Science

text: live

text: Generic

characteristic: cell line

text: missing

text: missing

text: Emiliania huxleyi

text: cells

text: cells

characteristic: tissue

text: Cells, control day 13 3

text: control


text: The Weizmann Institute of Science

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: missing

text: missing

text: Emiliania huxleyi

text: cells

text: cells

text: Cells, control day 13 2

text: control


text: The Weizmann Institute of Science

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

text: missing

text: missing

text: Emiliania huxleyi

text: cells

text: cells

text: Cells, control day 13 1

text: control


characteristic: External Id

text: The Weizmann Institute of Science

text: live

text: Generic

characteristic: SRA accession

text: missing

text: missing

text: Emiliania huxleyi

text: cells

text: cells

text: Cells, UV day 13 3

text: Constant UV


text: The Weizmann Institute of Science

characteristic: INSDC center name

text: live

text: Generic

text: missing

text: missing

text: Emiliania huxleyi

characteristic: organism

text: cells

text: cells

text: Cells, UV day 13 2

text: Constant UV


text: The Weizmann Institute of Science

text: live

text: Generic

text: missing

text: missing

text: Emiliania huxleyi

text: cells

text: cells

text: Cells, UV day 13 1

text: Constant UV

characteristic: treatment


text: The Weizmann Institute of Science

text: live

text: Generic

text: missing

text: missing

text: Emiliania huxleyi

text: cells

text: cells

text: Cells, control day 10 3

characteristic: title

text: control


text: The Weizmann Institute of Science

characteristic: INSDC first public

text: live

text: Generic

text: missing

text: missing

text: Emiliania huxleyi

text: cells

text: cells

text: Cells, control day 10 2

text: control


text: The Weizmann Institute of Science

text: live

text: Generic

text: missing

text: missing

text: Emiliania huxleyi

text: cells

text: cells

text: Cells, control day 10 1

text: control


text: The Weizmann Institute of Science

text: live

text: Generic

text: missing

text: missing

text: Emiliania huxleyi

text: cells

text: cells

text: Cells, UV day 10 3

text: Constant UV


text: The Weizmann Institute of Science

text: live

text: Generic

text: missing

text: missing

text: Emiliania huxleyi

text: cells

text: cells

text: Cells, UV day 10 2

text: Constant UV


text: The Weizmann Institute of Science

text: live

text: Generic

text: missing

text: missing

text: Emiliania huxleyi

text: cells

text: cells

text: Cells, UV day 10 1

text: Constant UV


text: The Weizmann Institute of Science

text: live

text: Generic

text: missing

text: missing

text: Emiliania huxleyi

text: cells

text: cells

text: Cells, control day 7 3

text: control


text: The Weizmann Institute of Science

text: live

text: Generic

text: missing

text: missing

text: Emiliania huxleyi

text: cells

text: cells

text: Cells, control day 7 2

text: control


text: The Weizmann Institute of Science

text: live

text: Generic

text: missing

text: missing

text: Emiliania huxleyi

text: cells

text: cells

text: Cells, control day 7 1

text: control


text: The Weizmann Institute of Science

text: live

text: Generic

text: missing

text: missing

text: Emiliania huxleyi

text: cells

text: cells

text: Cells, UV day 7 3

text: Constant UV


text: The Weizmann Institute of Science

text: live

text: Generic

text: missing

text: missing

text: Emiliania huxleyi

text: cells

text: cells

text: Cells, UV day 7 2

text: Constant UV


text: The Weizmann Institute of Science

text: live

text: Generic

text: missing

text: missing

text: Emiliania huxleyi

text: cells

text: cells

text: Cells, UV day 7 1

text: Constant UV


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

characteristic: host

text: missing

text: missing

text: missing

text: missing

text: Campylobacter jejuni

text: missing

characteristic: serovar

text: Campylobacter jejuni


Clostridium scindens JCM10419 (Y1113)

text: University of Illinois Urbana-Champaign

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Fusae Takamine

text: Japan

text: Homo sapiens

text: feces

text: Fusae Takamine

text: feces

text: [Clostridium] scindens

text: JCM

text: cell culture

text: JCM10419 (Y1113)

characteristic: strain

text: Microbe sample from [Clostridium] scindens


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: Campylobacter coli

text: missing

text: Campylobacter coli


text: live

text: Pathogen.cl

text: CDC

text: missing

text: USA

text: missing

text: missing

text: missing

characteristic: isolate

text: missing

text: missing

text: missing

text: Salmonella enterica

text: PulseNet

text: Texas Department of State Health Services

text: missing

text: human

text: Salmonella enterica


text: University of Alaska Anchorage

text: live

text: Viral

text: Porcine circovirus type 2 ORF2 sequence from strain PCV2/Kharkiv-1/2019. The sequence is from a domestic pig liver samples collected at local market.

characteristic: description

text: b

characteristic: genotype

text: Ukraine: Kharkiv

text: Sus scrofa

text: Local market liver sample

text: 49.98 N 36.23 E

text: Porcine circovirus 2

text: Viral sample from Porcine circovirus 2