text: Palmer Lab

text: live

text: Model organism or animal

text: Winston-Salem, NC, USA

text: missing

text: adult

text: USA: Charleston, SC

text: Rattus norvegicus

text: male

text: N/NIH heterogenous stock rat

text: spleen

text: N/NIH heterogenous stock rat individual_Riptide94_933000320049186


status: PUBLIC

characteristic: External Id

text: Palmer Lab

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Winston-Salem, NC, USA

tag: attribute

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text: adult

text: USA: Charleston, SC

text: Rattus norvegicus

characteristic: organism

text: female

characteristic: sex

text: N/NIH heterogenous stock rat

characteristic: strain

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characteristic: tissue

text: N/NIH heterogenous stock rat individual_Riptide94_933000320049187

characteristic: title


text: Palmer Lab

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text: Model organism or animal

text: Winston-Salem, NC, USA

text: missing

text: adult

text: USA: Charleston, SC

text: Rattus norvegicus

text: male

text: N/NIH heterogenous stock rat

text: spleen

text: N/NIH heterogenous stock rat individual_Riptide94_933000320049192


text: Palmer Lab

text: live

text: Model organism or animal

text: Winston-Salem, NC, USA

text: missing

text: adult

text: USA: Charleston, SC

text: Rattus norvegicus

text: male

text: N/NIH heterogenous stock rat

text: spleen

text: N/NIH heterogenous stock rat individual_Riptide94_933000320049193


text: Palmer Lab

text: live

text: Model organism or animal

text: Winston-Salem, NC, USA

text: missing

text: adult

text: USA: Charleston, SC

text: Rattus norvegicus

text: male

text: N/NIH heterogenous stock rat

text: spleen

text: N/NIH heterogenous stock rat individual_Riptide94_933000320049194


text: Palmer Lab

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text: Model organism or animal

text: Winston-Salem, NC, USA

text: missing

text: adult

text: USA: Charleston, SC

text: Rattus norvegicus

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text: N/NIH heterogenous stock rat

text: spleen

text: N/NIH heterogenous stock rat individual_Riptide94_933000320049198


text: Palmer Lab

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text: Model organism or animal

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text: missing

text: adult

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text: Rattus norvegicus

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text: Palmer Lab

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text: Rattus norvegicus

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text: N/NIH heterogenous stock rat

text: spleen

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text: Palmer Lab

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text: Rattus norvegicus

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text: N/NIH heterogenous stock rat

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text: Palmer Lab

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text: Palmer Lab

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text: N/NIH heterogenous stock rat

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text: N/NIH heterogenous stock rat individual_Riptide94_933000320187733


text: Palmer Lab

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text: Model organism or animal

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text: missing

text: adult

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text: N/NIH heterogenous stock rat

text: spleen

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text: Palmer Lab

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text: Model organism or animal

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text: missing

text: adult

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text: Rattus norvegicus

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text: N/NIH heterogenous stock rat

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text: Palmer Lab

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text: Model organism or animal

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text: adult

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text: Rattus norvegicus

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text: Palmer Lab

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text: Model organism or animal

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text: missing

text: adult

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text: Rattus norvegicus

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text: N/NIH heterogenous stock rat

text: spleen

text: N/NIH heterogenous stock rat individual_Riptide94_933000320187737


text: Palmer Lab

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text: Model organism or animal

text: Winston-Salem, NC, USA

text: missing

text: adult

text: USA: Charleston, SC

text: Rattus norvegicus

text: male

text: N/NIH heterogenous stock rat

text: spleen

text: N/NIH heterogenous stock rat individual_Riptide94_933000320187738


text: Palmer Lab

text: live

text: Model organism or animal

text: Winston-Salem, NC, USA

text: missing

text: adult

text: USA: Charleston, SC

text: Rattus norvegicus

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text: N/NIH heterogenous stock rat

text: spleen

text: N/NIH heterogenous stock rat individual_Riptide94_933000320187739


text: Palmer Lab

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text: Model organism or animal

text: Winston-Salem, NC, USA

text: missing

text: adult

text: USA: Charleston, SC

text: Rattus norvegicus

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text: N/NIH heterogenous stock rat

text: spleen

text: N/NIH heterogenous stock rat individual_Riptide94_933000320187740


text: Palmer Lab

text: live

text: Model organism or animal

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text: missing

text: adult

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text: Rattus norvegicus

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text: N/NIH heterogenous stock rat

text: spleen

text: N/NIH heterogenous stock rat individual_Riptide94_933000320187742


text: Palmer Lab

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text: Model organism or animal

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text: missing

text: adult

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text: Rattus norvegicus

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text: N/NIH heterogenous stock rat

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text: Palmer Lab

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text: Model organism or animal

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text: missing

text: adult

text: USA: Charleston, SC

text: Rattus norvegicus

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text: N/NIH heterogenous stock rat

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text: N/NIH heterogenous stock rat individual_Riptide94_933000320187747


text: Palmer Lab

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text: Model organism or animal

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text: missing

text: adult

text: USA: Charleston, SC

text: Rattus norvegicus

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text: N/NIH heterogenous stock rat

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text: N/NIH heterogenous stock rat individual_Riptide94_933000320187749


text: Palmer Lab

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text: Model organism or animal

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text: missing

text: adult

text: USA: Charleston, SC

text: Rattus norvegicus

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text: N/NIH heterogenous stock rat

text: spleen

text: N/NIH heterogenous stock rat individual_Riptide94_933000320187758


text: Palmer Lab

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text: Palmer Lab

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text: N/NIH heterogenous stock rat individual_Riptide94_933000320187761


text: Palmer Lab

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text: missing

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text: N/NIH heterogenous stock rat

text: spleen

text: N/NIH heterogenous stock rat individual_Riptide94_933000320187762


text: Palmer Lab

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text: missing

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text: N/NIH heterogenous stock rat

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text: Palmer Lab

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text: Rattus norvegicus

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text: N/NIH heterogenous stock rat

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text: Palmer Lab

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text: Palmer Lab

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text: Palmer Lab

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text: Palmer Lab

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text: Palmer Lab

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text: Palmer Lab

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text: Palmer Lab

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text: Rattus norvegicus

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text: N/NIH heterogenous stock rat

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text: N/NIH heterogenous stock rat individual_Riptide94_933000320187929


text: Palmer Lab

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text: Rattus norvegicus

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text: N/NIH heterogenous stock rat individual_Riptide94_933000320187931


text: Palmer Lab

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text: Model organism or animal

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text: missing

text: adult

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text: Rattus norvegicus

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text: N/NIH heterogenous stock rat

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text: N/NIH heterogenous stock rat individual_Riptide94_933000320187939


text: Palmer Lab

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text: Palmer Lab

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text: Palmer Lab

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text: Rattus norvegicus

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text: N/NIH heterogenous stock rat

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text: Palmer Lab

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text: USA: San Diego, CA

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text: Palmer Lab

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text: Palmer Lab

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text: Palmer Lab

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text: Palmer Lab

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text: Palmer Lab

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text: Palmer Lab

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text: USA: San Diego, CA

text: Rattus norvegicus

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text: Palmer Lab

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text: Rattus norvegicus

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text: N/NIH heterogenous stock rat

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text: Palmer Lab

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text: Palmer Lab

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text: N/NIH heterogenous stock rat

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text: Palmer Lab

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text: Palmer Lab

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text: missing

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text: Rattus norvegicus

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text: N/NIH heterogenous stock rat

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text: Palmer Lab

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text: Rattus norvegicus

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text: N/NIH heterogenous stock rat

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text: N/NIH heterogenous stock rat individual_Riptide94_933000320188122


text: Palmer Lab

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text: N/NIH heterogenous stock rat

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text: Palmer Lab

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text: Rattus norvegicus

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text: Palmer Lab

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text: Palmer Lab

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text: Rattus norvegicus

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text: N/NIH heterogenous stock rat

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text: Palmer Lab

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text: Rattus norvegicus

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text: N/NIH heterogenous stock rat

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text: N/NIH heterogenous stock rat individual_Riptide94_933000320188288


text: Palmer Lab

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text: missing

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text: Rattus norvegicus

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text: N/NIH heterogenous stock rat individual_Riptide94_933000320188292


text: Palmer Lab

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text: Rattus norvegicus

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text: N/NIH heterogenous stock rat

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text: Palmer Lab

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text: Palmer Lab

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text: Rattus norvegicus

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text: N/NIH heterogenous stock rat individual_Riptide94_933000320188300


text: Palmer Lab

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text: Palmer Lab

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text: Rattus norvegicus

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text: N/NIH heterogenous stock rat

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text: Palmer Lab

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text: missing

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text: Rattus norvegicus

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text: PulseNet Next Generation Subtyping Methods Unit

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characteristic: isolate

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text: Salmonella enterica

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text: South Carolina Department of Health and Environmental Control

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characteristic: serovar

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text: Salmonella enterica


text: Biobot Analytics

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text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

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text: ceres nanotrap

text: thermo magmax microbiome ultra nucleic acid isolation kit

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text: wastewater

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text: Ginkgo Bioworks clinical laboratory

text: SARS-CoV-2: wastewater surveillance sample from wastewater metagenome

text: Pasteurized; virus captured with Ceres NanoTrap particles; nucleic acid extracted with MagMAX DNA/RNA binding beads

text: missing

text: missing

text: wastewater treatment plant

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text: va

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

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characteristic: description

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text: wastewater metagenome

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characteristic: External Id

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text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

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text: Biobot Analytics

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text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

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text: Biobot Analytics

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text: Biobot Analytics

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text: Biobot Analytics

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text: Biobot Analytics

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text: Biobot Analytics

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text: yes


text: Biobot Analytics

text: live

characteristic: INSDC status

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: missing

text: ceres nanotrap

text: USA: North Carolina

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: missing

text: missing

text: wastewater treatment plant

text: missing

text: nc

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

characteristic: NCBI submission model

text: Biobot Analytics

text: ceres nanotrap

text: USA: Guam

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: grab

text: gu

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

characteristic: NCBI submission package

text: Biobot Analytics

text: ceres nanotrap

text: USA: Oklahoma

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: ok

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

characteristic: SRA accession

text: Biobot Analytics

text: ceres nanotrap

text: USA: Guam

text: wastewater

text: wastewater metagenome

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: gu

text: yes


text: Biobot Analytics

text: live

text: SARS-CoV-2: wastewater surveillance

text: Biobot Analytics

text: ceres nanotrap

text: USA: Indiana

text: wastewater

text: wastewater metagenome

characteristic: organism

text: Ginkgo Bioworks clinical laboratory

text: raw wastewater

text: wastewater treatment plant

text: composite

text: in

text: yes


Escherichia coli FELIX_MS586

text: Lawrence Berkeley National Lab

text: live

text: Microbe, viral or environmental

text: engineered mutant

text: missing

text: BW25113(DE(araD-araB)567; lacZ4787(del)(::rrnB-3); LAM-; rph-1; DE(rhaD-rhaB)568; hsdR514) deltamalZ::FRT

characteristic: genotype

text: missing

text: missing

characteristic: host

text: Escherichia coli

text: whole organism

text: Escherichia coli FELIX_MS586


Escherichia coli FELIX_MS591

text: Lawrence Berkeley National Lab

text: live

text: Microbe, viral or environmental

text: engineered mutant

text: missing

text: BW25113(DE(araD-araB)567; lacZ4787(del)(::rrnB-3); LAM-; rph-1; DE(rhaD-rhaB)568; hsdR514) deltamarR::PmarR-RFP_cI

text: missing

text: missing

text: Escherichia coli

text: whole organism

characteristic: strain

text: Escherichia coli FELIX_MS591


Escherichia coli FELIX_MS595

text: Lawrence Berkeley National Lab

text: live

text: Microbe, viral or environmental

text: engineered mutant

text: missing

text: BW25113(DE(araD-araB)567; lacZ4787(del)(::rrnB-3); LAM-; rph-1; DE(rhaD-rhaB)568; hsdR514) ygiD_A125T

text: missing

text: missing

text: Escherichia coli

text: whole organism

text: Escherichia coli FELIX_MS595

characteristic: title


Pseudomonas aeruginosa FELIX_MS731

text: Lawrence Berkeley National Lab

text: live

text: Microbe, viral or environmental

text: engineered mutant

text: missing

text: missing

text: missing

text: Pseudomonas aeruginosa

text: whole organism

text: Pseudomonas aeruginosa FELIX_MS731


Pseudomonas putida FELIX_MS563

text: Lawrence Berkeley National Lab

text: live

text: Microbe, viral or environmental

text: engineered mutant

text: missing

text: fadAdelta, fadBdelta

text: missing

text: missing

text: Pseudomonas putida

text: whole organism

text: Pseudomonas putida FELIX_MS563


Salmonella enterica FELIX_MS734

text: Lawrence Berkeley National Lab

text: live

text: Microbe, viral or environmental

text: engineered mutant

text: missing

text: TR6583 prpB-

text: missing

text: missing

characteristic: isolate

text: Salmonella enterica

text: whole organism

text: missing

text: derived from Salmonella enterica TR6583; insertional mutagenesis

text: Salmonella enterica FELIX_MS734


Salmonella enterica FELIX_MS735

text: Lawrence Berkeley National Lab

text: live

text: Microbe, viral or environmental

text: engineered mutant

text: missing

text: metE205 ara-9 prpC114::mudJ

text: missing

text: missing

text: Salmonella enterica

text: whole organism

text: missing

text: JE4199-cured; insertional mutagenesis

text: Salmonella enterica FELIX_MS735


Salmonella enterica FELIX_MS736

text: Lawrence Berkeley National Lab

text: live

text: Microbe, viral or environmental

text: engineered mutant

text: missing

text: metE205 ara-9 DEL1231 acs prpE213::kan+

text: missing

text: missing

text: Salmonella enterica

text: whole organism

text: Salmonella enterica FELIX_MS736


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: missing

characteristic: serovar

text: human

text: Salmonella enterica


text: NJ DOH

text: live

text: SARS-CoV-2: clinical or host-associated

text: NJDOH, Public Health and Environmental Laboratories

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23015362/2023

text: clinical

text: Clinical diagnostic

text: Baseline surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: NJ DOH

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23015364/2023

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Clinical diagnostic

text: Baseline surveillance


text: NJ DOH

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23015418/2023

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: NJ DOH

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23015420/2023

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: NJ DOH

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23015421/2023

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: NJ DOH

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23015423/2023

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: NJ DOH

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23015424/2023

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: NJ DOH

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23015435/2023

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: NJ DOH

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23015436/2023

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: NJ DOH

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23015439/2023

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: NJ DOH

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23015443/2023

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: NJ DOH

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23015445/2023

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: NJ DOH

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23015447/2023

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: NJ DOH

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23015448/2023

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: NJ DOH

text: live

text: SARS-CoV-2: clinical or host-associated

text: NJDOH, Public Health and Environmental Laboratories

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23015450/2023

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: NJ DOH

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23015487/2023

text: clinical

text: Clinical diagnostic

text: Baseline surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: NJ DOH

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23015488/2023

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Clinical diagnostic

text: Baseline surveillance


text: NJ DOH

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23015490/2023

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: NJ DOH

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23015492/2023

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: NJ DOH

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23015493/2023

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: NJ DOH

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23015495/2023

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: NJ DOH

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23015551/2023

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: NJ DOH

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23015552/2023

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: NJ DOH

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23015553/2023

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: NJ DOH

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23015554/2023

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: NJ DOH

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23015571/2023

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: NJ DOH

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23015574/2023

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: NJ DOH

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23015579/2023

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: NJ DOH

text: live

text: SARS-CoV-2: clinical or host-associated

text: NJDOH, Public Health and Environmental Laboratories

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23015581/2023

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: NJ DOH

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23015582/2023

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: NJ DOH

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23015584/2023

text: clinical

text: Clinical diagnostic

text: Baseline surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: NJ DOH

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23015586/2023

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Clinical diagnostic

text: Baseline surveillance


text: Centers for Disease Control and Prevention Enteric Diseases Laboratory Branch

text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Vibrio parahaemolyticus

text: PulseNet

text: missing

text: missing

text: human

text: Vibrio parahaemolyticus


text: PulseNet Next Generation Subtyping Methods Unit

text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: missing

text: human

text: Salmonella enterica


BR

text: Centro de Investigaciones Biologicas del Noroeste

text: live

text: MIMS.me

text: 15 cm

characteristic: depth

text: Keywords: GSC:MIxS;MIMS:6.0

characteristic: description

characteristic: elev

text: Marine biome

text: Hydrothermal vent

text: Sea sediment

text: Mexico:Baja California Sur

text: 24.40 N 111.50 W

text: marine sediment metagenome

text: Burro-rain


BD

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MIMS.me

text: 15 cm

text: Keywords: GSC:MIxS;MIMS:6.0

text: Marine biome

text: Hydrothermal vent

text: Sea sediment

text: Mexico:Baja California Sur

text: 24.40 N 111.50 W

text: marine sediment metagenome

text: Burro-dry


CBR

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIMS.me

text: 15 cm

text: Keywords: GSC:MIxS;MIMS:6.0

text: Marine biome

text: Oceanic zone

text: Sea sediment

text: Mexico:Baja California Sur

text: 24.40 N 111.50 W

text: marine sediment metagenome

text: Control-Burro-rain


CBD

text: live

text: MIMS.me

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 15 cm

text: Keywords: GSC:MIxS;MIMS:6.0

text: Marine biome

text: Oceanic zone

text: Sea sediment

text: Mexico:Baja California Sur

text: 24.40 N 111.50 W

text: marine sediment metagenome

text: Control-Burro-dry


MR

text: live

text: MIMS.me

text: 15 cm

text: Keywords: GSC:MIxS;MIMS:6.0

text: Mangrove biome

text: Hydrothermal system

text: Sea sediment

text: Mexico:Baja California Sur

text: 24.40 N 111.50 W

text: marine sediment metagenome

characteristic: organism

text: Manglar-rain


MD

text: live

text: MIMS.me

text: 15 cm

text: Keywords: GSC:MIxS;MIMS:6.0

text: Mangrove biome

text: Hydrothermal system

text: Sea sediment

text: Mexico:Baja California Sur

text: 24.40 N 111.50 W

text: marine sediment metagenome

text: Manglar-dry


CMR

text: live

text: MIMS.me

text: 15 cm

text: Keywords: GSC:MIxS;MIMS:6.0

text: Mangrove biome

text: Intertidal zone

text: Sea sediment

text: Mexico:Baja California Sur

text: 24.40 N 111.50 W

text: marine sediment metagenome

text: Control-Manglar-rain


CMD

text: live

text: MIMS.me

text: 15 cm

text: Keywords: GSC:MIxS;MIMS:6.0

text: Mangrove biome

text: Intertidal zone

text: Sea sediment

text: Mexico:Baja California Sur

text: 24.40 N 111.50 W

text: marine sediment metagenome

text: Control-Manglar-dry


VR

text: live

text: MIMS.me

text: 15 cm

text: Keywords: GSC:MIxS;MIMS:6.0

text: Marine biome

text: Hydrothermal system

text: Sea sediment

text: Mexico:Baja California Sur

text: 24.40 N 111.50 W

text: marine sediment metagenome

text: Ventana-rain


VD

text: live

text: MIMS.me

text: 15 cm

text: Keywords: GSC:MIxS;MIMS:6.0

text: Marine biome

text: Hydrothermal system

text: Sea sediment

text: Mexico:Baja California Sur

text: 24.40 N 111.50 W

text: marine sediment metagenome

text: Ventana-dry


CVR

text: live

text: MIMS.me

text: 15 cm

text: Keywords: GSC:MIxS;MIMS:6.0

text: Marine biome

text: Shoreline

text: Sea sediment

text: Mexico:Baja California Sur

text: 24.40 N 111.50 W

text: marine sediment metagenome

text: Control-Ventana-rain


CVD

text: live

text: MIMS.me

text: 15 cm

text: Keywords: GSC:MIxS;MIMS:6.0

text: Marine biome

text: Shoreline

text: Sea sediment

text: Mexico:Baja California Sur

text: 24.40 N 111.50 W

text: marine sediment metagenome

text: Control-Ventana-dry


text: CDPHE SARS-CoV-2 submissions

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

text: USA

text: Homo sapiens

text: skin

text: Providencia rettgeri

text: whole organism

text: Microbe sample from Providencia rettgeri


text: CDPHE SARS-CoV-2 submissions

text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

characteristic: host

text: bronchial washings

text: Legionella pneumophila

text: whole organism

text: Microbe sample from Legionella pneumophila


text: Helwan University

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: no

text: sputum collection by coughing

text: Keywords: GSC:MIxS;MIMS:6.0

text: long-acting beta-agonist

text: respiratory

text: microbiome

text: not applicable

text: Egypt: Cairo

text: Homo sapiens

text: stable chronic obstructive pulmonary disease

text: male

text: not applicable

text: human nasopharyngeal metagenome

text: falcon tube

text: -80° C

text: non-smoker

characteristic: smoker

text: MIMS Environmental/Metagenome sample from human nasopharyngeal metagenome

characteristic: title


text: Helwan University

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: no

text: sputum collection by coughing

text: Keywords: GSC:MIxS;MIMS:6.0

text: long-acting beta-agonist, corticosteroid

text: respiratory

text: microbiome

text: not applicable

text: Egypt: Cairo

text: Homo sapiens

text: exacerbated chronic obstructive pulmonary disease

text: male

text: not applicable

text: human nasopharyngeal metagenome

text: falcon tube

text: -80° C

text: non-smoker


text: Helwan University

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: no

text: sputum collection by coughing

text: Keywords: GSC:MIxS;MIMS:6.0

text: long-acting beta-agonist

text: respiratory

text: microbiome

text: not applicable

text: Egypt: Cairo

text: Homo sapiens

text: chronic obstructive pulmonary disease, acute bronchitis

text: male

text: not applicable

text: human nasopharyngeal metagenome

text: falcon tube

text: -80° C

text: non-smoker


text: CT Public Health Laboratory submission group

text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1174808001/2023

characteristic: isolate

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1174809001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1174810001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1174813001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1174814001/2023

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1174817001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1174818001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1175587001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1175588001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1175701001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1175703001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1175704001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1175705001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1175706001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: CT Public Health Laboratory submission group

text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1175707001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1175709001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1175710001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1175711001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1175841001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1175846001/2023

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1175850001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1175859001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1175861001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1175863001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1175865001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1175866001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1175868001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1175870001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: CT Public Health Laboratory submission group

text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1175871001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1175872001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: Centers for Disease Control and Prevention Enteric Diseases Laboratory Branch

text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Yersinia enterocolitica

text: PulseNet

text: missing

text: missing

characteristic: serovar

text: human

characteristic: strain

text: Yersinia enterocolitica


text: PulseNet Next Generation Subtyping Methods Unit

text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: Salmonella enterica


Dercas nina DN2020.1

text: University of Manitoba

text: live

text: Invertebrate

text: not applicable

characteristic: breed

text: China: Guangxi, Guilin

text: not applicable

text: collected from the wild

text: 25.281 N 110.286 E

text: Dercas nina

text: leg

characteristic: tissue

text: Invertebrate sample from Dercas nina


characteristic: External Id

text: The Rockefeller University

characteristic: INSDC center name

text: live

text: Metagenome or environmental

text: 13-14 weeks

characteristic: age

characteristic: description

text: normal

characteristic: genotype

text: USA: New York

text: Mus musculus

text: colon

text: missing

text: mouse metagenome

text: female

characteristic: sex


text: The Rockefeller University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 13-14 weeks

text: IgAKO

text: USA: New York

text: Mus musculus

text: colon

text: missing

text: mouse metagenome

characteristic: organism

text: female


text: EGFP-negative

text: UC Berkeley

characteristic: INSDC secondary accession

text: live

text: Human

characteristic: SRA accession

text: VSVG Cas9-EDV

characteristic: Treatment

text: Fetal

text: University of California Berkeley Cell Culture Facility

text: not applicable

text: Human embryonic kidney cells

characteristic: isolate

text: Homo sapiens

text: replicate 1

characteristic: replicate

text: female

text: Embryonic Kidney

text: Human sample from Homo sapiens

characteristic: title


characteristic: External Id

text: EGFP-positive

text: UC Berkeley

characteristic: INSDC center name

text: live

text: Human

text: VSVG Cas9-EDV

text: Fetal

text: not applicable

text: Human embryonic kidney cells

text: Homo sapiens

text: replicate 1

text: female

text: Embryonic Kidney

characteristic: tissue

text: Human sample from Homo sapiens


text: EGFP-negative

text: UC Berkeley

text: live

text: Human

text: VSVG Cas9-EDV

text: Fetal

characteristic: age

text: not applicable

text: Human embryonic kidney cells

text: Homo sapiens

text: replicate 2

text: female

text: Embryonic Kidney

text: Human sample from Homo sapiens


text: EGFP-positive

text: UC Berkeley

text: live

text: Human

text: VSVG Cas9-EDV

text: Fetal

text: not applicable

text: Human embryonic kidney cells

text: Homo sapiens

text: replicate 2

text: female

characteristic: sex

text: Embryonic Kidney

text: Human sample from Homo sapiens


text: EGFP-negative

text: UC Berkeley

characteristic: INSDC first public

text: live

text: Human

text: VSVG Cas9-EDV

text: Fetal

text: not applicable

text: Human embryonic kidney cells

text: Homo sapiens

text: replicate 3

text: female

text: Embryonic Kidney

text: Human sample from Homo sapiens


text: EGFP-positive

text: UC Berkeley

characteristic: INSDC last update

text: live

text: Human

text: VSVG Cas9-EDV

text: Fetal

text: not applicable

text: Human embryonic kidney cells

text: Homo sapiens

text: replicate 3

text: female

text: Embryonic Kidney

text: Human sample from Homo sapiens


text: EGFP-negative

text: UC Berkeley

text: live

characteristic: INSDC status

text: Human

text: CD19 scFv Cas9-EDV

text: Fetal

text: not applicable

text: Human embryonic kidney cells

text: Homo sapiens

text: replicate 1

text: female

text: Embryonic Kidney

text: Human sample from Homo sapiens


text: EGFP-positive

text: UC Berkeley

text: live

text: Human

characteristic: NCBI submission model

text: CD19 scFv Cas9-EDV

text: Fetal

text: not applicable

text: Human embryonic kidney cells

text: Homo sapiens

text: replicate 1

text: female

text: Embryonic Kidney

text: Human sample from Homo sapiens


text: EGFP-negative

text: UC Berkeley

text: live

text: Human

characteristic: NCBI submission package

text: CD19 scFv Cas9-EDV

text: Fetal

text: not applicable

text: Human embryonic kidney cells

text: Homo sapiens

text: replicate 2

text: female

text: Embryonic Kidney

text: Human sample from Homo sapiens


text: EGFP-positive

text: UC Berkeley

text: live

text: Human

text: CD19 scFv Cas9-EDV

text: Fetal

text: not applicable

text: Human embryonic kidney cells

text: Homo sapiens

characteristic: organism

text: replicate 2

text: female

text: Embryonic Kidney

text: Human sample from Homo sapiens


text: EGFP-negative

text: UC Berkeley

characteristic: INSDC secondary accession

text: live

text: Human

text: CD19 scFv Cas9-EDV

text: Fetal

text: not applicable

text: Human embryonic kidney cells

text: Homo sapiens

text: replicate 3

text: female

text: Embryonic Kidney

text: Human sample from Homo sapiens


text: EGFP-positive

text: UC Berkeley

text: live

text: Human

characteristic: SRA accession

text: CD19 scFv Cas9-EDV

text: Fetal

text: not applicable

text: Human embryonic kidney cells

text: Homo sapiens

text: replicate 3

text: female

text: Embryonic Kidney

text: Human sample from Homo sapiens


text: EGFP-negative

text: UC Berkeley

text: live

text: Human

text: Control scFv Cas9-EDV

characteristic: Treatment

text: Fetal

text: not applicable

text: Human embryonic kidney cells

text: Homo sapiens

text: replicate 1

text: female

text: Embryonic Kidney

text: Human sample from Homo sapiens


text: EGFP-positive

text: UC Berkeley

text: live

text: Human

text: Control scFv Cas9-EDV

text: Fetal

text: not applicable

text: Human embryonic kidney cells

characteristic: isolate

text: Homo sapiens

text: replicate 1

text: female

text: Embryonic Kidney

text: Human sample from Homo sapiens


text: EGFP-negative

text: UC Berkeley

text: live

text: Human

text: Control scFv Cas9-EDV

text: Fetal

text: not applicable

text: Human embryonic kidney cells

text: Homo sapiens

text: replicate 2

characteristic: replicate

text: female

text: Embryonic Kidney

text: Human sample from Homo sapiens


text: EGFP-positive

text: UC Berkeley

text: live

text: Human

text: Control scFv Cas9-EDV

text: Fetal

text: not applicable

text: Human embryonic kidney cells

text: Homo sapiens

text: replicate 2

text: female

text: Embryonic Kidney

text: Human sample from Homo sapiens

characteristic: title


characteristic: External Id

text: EGFP-negative

text: UC Berkeley

text: live

text: Human

text: Control scFv Cas9-EDV

text: Fetal

text: not applicable

text: Human embryonic kidney cells

text: Homo sapiens

text: replicate 3

text: female

text: Embryonic Kidney

text: Human sample from Homo sapiens


text: EGFP-positive

text: UC Berkeley

characteristic: INSDC center name

text: live

text: Human

text: Control scFv Cas9-EDV

text: Fetal

text: not applicable

text: Human embryonic kidney cells

text: Homo sapiens

text: replicate 3

text: female

text: Embryonic Kidney

text: Human sample from Homo sapiens


text: EGFP-negative

text: UC Berkeley

text: live

text: Human

text: Untreated

text: Fetal

text: not applicable

text: Human embryonic kidney cells

text: Homo sapiens

text: replicate 1

text: female

text: Embryonic Kidney

characteristic: tissue

text: Human sample from Homo sapiens


text: EGFP-positive

text: UC Berkeley

text: live

text: Human

text: Untreated

text: Fetal

characteristic: age

text: not applicable

text: Human embryonic kidney cells

text: Homo sapiens

text: replicate 1

text: female

text: Embryonic Kidney

text: Human sample from Homo sapiens


text: EGFP-negative

text: UC Berkeley

text: live

text: Human

text: Untreated

text: Fetal

text: not applicable

text: Human embryonic kidney cells

text: Homo sapiens

text: replicate 2

text: female

characteristic: sex

text: Humanized mouse spleen

text: Human sample from Homo sapiens


text: EGFP-positive

text: UC Berkeley

characteristic: INSDC first public

text: live

text: Human

text: Untreated

text: Fetal

text: not applicable

text: Human embryonic kidney cells

text: Homo sapiens

text: replicate 2

text: female

text: Humanized mouse spleen

text: Human sample from Homo sapiens


text: EGFP-negative

text: UC Berkeley

characteristic: INSDC last update

text: live

text: Human

text: Untreated

text: Fetal

text: not applicable

text: Human embryonic kidney cells

text: Homo sapiens

text: replicate 3

text: female

text: Humanized mouse spleen

text: Human sample from Homo sapiens


text: EGFP-positive

text: UC Berkeley

text: live

characteristic: INSDC status

text: Human

text: Untreated

text: Fetal

text: not applicable

text: Human embryonic kidney cells

text: Homo sapiens

text: replicate 3

text: female

text: Humanized mouse spleen

text: Human sample from Homo sapiens


text: mCherry-positive

text: UC Berkeley

text: live

text: Human

characteristic: NCBI submission model

text: T cell-targeted Cas9-EDV

text: Adult

text: Jackson Labs

text: T cell

text: not applicable

text: CD4+ or CD8+ T cell

text: Homo sapiens

text: replicate 1

text: not determined

text: Humanized mouse spleen

text: Human sample from Homo sapiens


text: mCherry-positive

text: UC Berkeley

text: live

text: Human

characteristic: NCBI submission package

text: T cell-targeted Cas9-EDV

text: Adult

text: Jackson Labs

text: T cell

text: not applicable

text: CD4+ or CD8+ T cell

text: Homo sapiens

text: replicate 2

text: not determined

text: Humanized mouse spleen

text: Human sample from Homo sapiens


text: mCherry-positive

text: UC Berkeley

text: live

text: Human

text: T cell-targeted lentivirus

text: Adult

text: Jackson Labs

text: T cell

text: not applicable

text: CD4+ or CD8+ T cell

text: Homo sapiens

characteristic: organism

text: replicate 1

text: not determined

text: Humanized mouse spleen

text: Human sample from Homo sapiens


text: mCherry-positive

text: UC Berkeley

characteristic: INSDC secondary accession

text: live

text: Human

text: T cell-targeted lentivirus

text: Adult

text: Jackson Labs

text: T cell

text: not applicable

text: CD4+ or CD8+ T cell

text: Homo sapiens

text: replicate 3

text: not determined

text: Humanized mouse spleen

text: Human sample from Homo sapiens


text: mCherry-negative

text: UC Berkeley

text: live

text: Human

characteristic: SRA accession

text: T cell-targeted Cas9-EDV

text: Adult

text: Jackson Labs

text: T cell

text: not applicable

text: CD4+ or CD8+ T cell

text: Homo sapiens

text: replicate 1

text: not determined

text: Humanized mouse spleen

text: Human sample from Homo sapiens


text: mCherry-negative

text: UC Berkeley

text: live

text: Human

text: T cell-targeted Cas9-EDV

characteristic: Treatment

text: Adult

text: Jackson Labs

text: T cell

text: not applicable

text: CD4+ or CD8+ T cell

text: Homo sapiens

text: replicate 2

text: not determined

text: Humanized mouse spleen

text: Human sample from Homo sapiens


text: mCherry-negative

text: UC Berkeley

text: live

text: Human

text: T cell-targeted lentivirus

text: Adult

text: Jackson Labs

text: T cell

text: not applicable

text: CD4+ or CD8+ T cell

characteristic: isolate

text: Homo sapiens

text: replicate 1

text: not determined

text: Humanized mouse spleen

text: Human sample from Homo sapiens


text: mCherry-negative

text: UC Berkeley

text: live

text: Human

text: T cell-targeted lentivirus

text: Adult

text: Jackson Labs

text: T cell

text: not applicable

text: CD4+ or CD8+ T cell

text: Homo sapiens

text: replicate 2

characteristic: replicate

text: not determined

text: Humanized mouse spleen

text: Human sample from Homo sapiens


text: mCherry-negative

text: UC Berkeley

text: live

text: Human

text: T cell-targeted lentivirus

text: Adult

text: Jackson Labs

text: T cell

text: not applicable

text: CD4+ or CD8+ T cell

text: Homo sapiens

text: replicate 3

text: not determined

text: Humanized mouse spleen

text: Human sample from Homo sapiens

characteristic: title


characteristic: External Id

text: mCherry-positive

text: UC Berkeley

text: live

text: Human

text: T cell-targeted Cas9-EDV

text: Adult

text: Jackson Labs

text: T cell

text: not applicable

text: CD4+ or CD8+ T cell

text: Homo sapiens

text: replicate 3

text: not determined

text: Humanized mouse spleen

text: Human sample from Homo sapiens


text: mCherry-positive

text: UC Berkeley

characteristic: INSDC center name

text: live

text: Human

text: T cell-targeted Cas9-EDV

text: Adult

text: Jackson Labs

text: T cell

text: not applicable

text: CD4+ or CD8+ T cell

text: Homo sapiens

text: replicate 4

text: not determined

text: Humanized mouse spleen

text: Human sample from Homo sapiens


text: mCherry-positive

text: UC Berkeley

text: live

text: Human

text: T cell-targeted Cas9-EDV

text: Adult

text: Jackson Labs

text: T cell

text: not applicable

text: CD4+ or CD8+ T cell

text: Homo sapiens

text: replicate 5

text: not determined

text: Humanized mouse spleen

characteristic: tissue

text: Human sample from Homo sapiens


text: mCherry-positive

text: UC Berkeley

text: live

text: Human

text: T cell-targeted Cas9-EDV

text: Adult

characteristic: age

text: Jackson Labs

text: T cell

text: not applicable

text: CD4+ or CD8+ T cell

text: Homo sapiens

text: replicate 6

text: not determined

text: Humanized mouse spleen

text: Human sample from Homo sapiens


text: mCherry-positive

text: UC Berkeley

text: live

text: Human

text: T cell-targeted Cas9-EDV

text: Adult

text: Jackson Labs

text: T cell

text: not applicable

text: CD4+ or CD8+ T cell

text: Homo sapiens

text: replicate 7

text: not determined

characteristic: sex

text: Humanized mouse spleen

text: Human sample from Homo sapiens


text: mCherry-positive

text: UC Berkeley

characteristic: INSDC first public

text: live

text: Human

text: T cell-targeted Cas9-EDV

text: Adult

text: Jackson Labs

text: T cell

text: not applicable

text: CD4+ or CD8+ T cell

text: Homo sapiens

text: replicate 8

text: not determined

text: Humanized mouse spleen

text: Human sample from Homo sapiens


text: mCherry-positive

text: UC Berkeley

characteristic: INSDC last update

text: live

text: Human

text: T cell-targeted lentivirus

text: Adult

text: Jackson Labs

text: T cell

text: not applicable

text: CD4+ or CD8+ T cell

text: Homo sapiens

text: replicate 2

text: not determined

text: Humanized mouse spleen

text: Human sample from Homo sapiens


text: mCherry-positive

text: UC Berkeley

text: live

characteristic: INSDC status

text: Human

text: T cell-targeted lentivirus

text: Adult

text: Jackson Labs

text: T cell

text: not applicable

text: CD4+ or CD8+ T cell

text: Homo sapiens

text: replicate 4

text: not determined

text: Humanized mouse spleen

text: Human sample from Homo sapiens


text: mCherry-positive

text: UC Berkeley

text: live

text: Human

characteristic: NCBI submission model

text: T cell-targeted lentivirus

text: Adult

text: Jackson Labs

text: T cell

text: not applicable

text: CD4+ or CD8+ T cell

text: Homo sapiens

text: replicate 5

text: not determined

text: Humanized mouse spleen

text: Human sample from Homo sapiens


text: mCherry-positive

text: UC Berkeley

text: live

text: Human

characteristic: NCBI submission package

text: T cell-targeted lentivirus

text: Adult

text: Jackson Labs

text: T cell

text: not applicable

text: CD4+ or CD8+ T cell

text: Homo sapiens

text: replicate 6

text: not determined

text: Humanized mouse spleen

text: Human sample from Homo sapiens


text: mCherry-positive

text: UC Berkeley

text: live

text: Human

text: T cell-targeted lentivirus

text: Adult

text: Jackson Labs

text: T cell

text: not applicable

text: CD4+ or CD8+ T cell

text: Homo sapiens

characteristic: organism

text: replicate 7

text: not determined

text: Humanized mouse spleen

text: Human sample from Homo sapiens


text: mCherry-positive

text: UC Berkeley

characteristic: INSDC secondary accession

text: live

text: Human

text: T cell-targeted lentivirus

text: Adult

text: Jackson Labs

text: T cell

text: not applicable

text: CD4+ or CD8+ T cell

text: Homo sapiens

text: replicate 8

text: not determined

text: Humanized mouse spleen

text: Human sample from Homo sapiens


text: mCherry-negative

text: UC Berkeley

text: live

text: Human

characteristic: SRA accession

text: T cell-targeted Cas9-EDV

text: Adult

text: Jackson Labs

text: T cell

text: not applicable

text: CD4+ or CD8+ T cell

text: Homo sapiens

text: replicate 1

text: not determined

text: Humanized mouse spleen

text: Human sample from Homo sapiens


text: mCherry-negative

text: UC Berkeley

text: live

text: Human

text: T cell-targeted Cas9-EDV

characteristic: Treatment

text: Adult

text: Jackson Labs

text: T cell

text: not applicable

text: CD4+ or CD8+ T cell

text: Homo sapiens

text: replicate 2

text: not determined

text: Humanized mouse spleen

text: Human sample from Homo sapiens


text: mCherry-negative

text: UC Berkeley

text: live

text: Human

text: T cell-targeted Cas9-EDV

text: Adult

text: Jackson Labs

text: T cell

text: not applicable

text: CD4+ or CD8+ T cell

characteristic: isolate

text: Homo sapiens

text: replicate 3

text: not determined

text: Humanized mouse spleen

text: Human sample from Homo sapiens


text: mCherry-negative

text: UC Berkeley

text: live

text: Human

text: T cell-targeted Cas9-EDV

text: Adult

text: Jackson Labs

text: T cell

text: not applicable

text: CD4+ or CD8+ T cell

text: Homo sapiens

text: replicate 4

characteristic: replicate

text: not determined

text: Humanized mouse spleen

text: Human sample from Homo sapiens


text: mCherry-negative

text: UC Berkeley

text: live

text: Human

text: T cell-targeted Cas9-EDV

text: Adult

text: Jackson Labs

text: T cell

text: not applicable

text: CD4+ or CD8+ T cell

text: Homo sapiens

text: replicate 5

text: not determined

text: Humanized mouse spleen

text: Human sample from Homo sapiens

characteristic: title


characteristic: External Id

text: mCherry-negative

text: UC Berkeley

text: live

text: Human

text: T cell-targeted Cas9-EDV

text: Adult

text: Jackson Labs

text: T cell

text: not applicable

text: CD4+ or CD8+ T cell

text: Homo sapiens

text: replicate 6

text: not determined

text: Humanized mouse spleen

text: Human sample from Homo sapiens


text: mCherry-negative

text: UC Berkeley

characteristic: INSDC center name

text: live

text: Human

text: T cell-targeted Cas9-EDV

text: Adult

text: Jackson Labs

text: T cell

text: not applicable

text: CD4+ or CD8+ T cell

text: Homo sapiens

text: replicate 7

text: not determined

text: Humanized mouse spleen

text: Human sample from Homo sapiens


text: mCherry-negative

text: UC Berkeley

text: live

text: Human

text: T cell-targeted Cas9-EDV

text: Adult

text: Jackson Labs

text: T cell

text: not applicable

text: CD4+ or CD8+ T cell

text: Homo sapiens

text: replicate 8

text: not determined

text: Humanized mouse spleen

characteristic: tissue

text: Human sample from Homo sapiens


text: mCherry-negative

text: UC Berkeley

text: live

text: Human

text: T cell-targeted lentivirus

text: Adult

characteristic: age

text: Jackson Labs

text: T cell

text: not applicable

text: CD4+ or CD8+ T cell

text: Homo sapiens

text: replicate 1

text: not determined

text: Humanized mouse spleen

text: Human sample from Homo sapiens


text: mCherry-negative

text: UC Berkeley

text: live

text: Human

text: T cell-targeted lentivirus

text: Adult

text: Jackson Labs

text: T cell

text: not applicable

text: CD4+ or CD8+ T cell

text: Homo sapiens

text: replicate 2

text: not determined

characteristic: sex

text: Humanized mouse spleen

text: Human sample from Homo sapiens


text: mCherry-negative

text: UC Berkeley

characteristic: INSDC first public

text: live

text: Human

text: T cell-targeted lentivirus

text: Adult

text: Jackson Labs

text: T cell

text: not applicable

text: CD4+ or CD8+ T cell

text: Homo sapiens

text: replicate 3

text: not determined

text: Humanized mouse spleen

text: Human sample from Homo sapiens


text: mCherry-negative

text: UC Berkeley

characteristic: INSDC last update

text: live

text: Human

text: T cell-targeted lentivirus

text: Adult

text: Jackson Labs

text: T cell

text: not applicable

text: CD4+ or CD8+ T cell

text: Homo sapiens

text: replicate 4

text: not determined

text: Humanized mouse spleen

text: Human sample from Homo sapiens


text: mCherry-negative

text: UC Berkeley

text: live

characteristic: INSDC status

text: Human

text: T cell-targeted lentivirus

text: Adult

text: Jackson Labs

text: T cell

text: not applicable

text: CD4+ or CD8+ T cell

text: Homo sapiens

text: replicate 5

text: not determined

text: Humanized mouse spleen

text: Human sample from Homo sapiens


text: mCherry-negative

text: UC Berkeley

text: live

text: Human

characteristic: NCBI submission model

text: T cell-targeted lentivirus

text: Adult

text: Jackson Labs

text: T cell

text: not applicable

text: CD4+ or CD8+ T cell

text: Homo sapiens

text: replicate 6

text: not determined

text: Humanized mouse spleen

text: Human sample from Homo sapiens


text: mCherry-negative

text: UC Berkeley

text: live

text: Human

characteristic: NCBI submission package

text: T cell-targeted lentivirus

text: Adult

text: Jackson Labs

text: T cell

text: not applicable

text: CD4+ or CD8+ T cell

text: Homo sapiens

text: replicate 7

text: not determined

text: Humanized mouse spleen

text: Human sample from Homo sapiens


text: mCherry-negative

text: UC Berkeley

text: live

text: Human

text: T cell-targeted lentivirus

text: Adult

text: Jackson Labs

text: T cell

text: not applicable

text: CD4+ or CD8+ T cell

text: Homo sapiens

characteristic: organism

text: replicate 8

text: not determined

text: Humanized mouse spleen

text: Human sample from Homo sapiens


characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

characteristic: host

text: missing

text: missing

text: missing

text: missing

text: missing

text: Escherichia coli

text: missing

characteristic: serovar

characteristic: strain

text: Escherichia coli


text: live

text: Pathogen.env

characteristic: SRA accession

text: missing

text: USA:WI

text: missing

characteristic: isolate

text: missing

text: ENVIRONMENTAL SPONGE

text: missing

text: Listeria monocytogenes

text: missing

text: Listeria monocytogenes


characteristic: External Id

text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Listeria monocytogenes

text: missing

text: Listeria monocytogenes

characteristic: title


Pseudoeurycea longicauda SMR2461

text: Centro de Investigacion y de Estudios Avanzados del Instituto Politecnico Nacional

characteristic: INSDC center name

text: live

text: RNAseq

characteristic: Library type

text: Model organism or animal

text: not applicable

characteristic: breed

text: Sean Rovito, Julio Garcia Sanchez, and Maria Segovia Ramirez

text: not applicable

characteristic: cultivar

text: adult

text: not applicable

characteristic: ecotype

text: Mexico: Estado de Mexico

text: Illumina HiSeq 4000

characteristic: instrument model

text: not applicable

text: 19.43799 N 100.17799 W

text: total RNA

characteristic: molecule

text: Pseudoeurycea longicauda

text: SRMS001A_index1_ATCACG_L001_R1_001.fastq.gz

characteristic: raw file

text: SRMS001A_index1_ATCACG_L001_R2_001.fastq.gz

text: not determined

text: Paired-end

characteristic: single or paired-end

text: not applicable

text: liver, heart, spleen, instestine, tail

characteristic: tissue


Pseudoeurycea longicauda SMR2460

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: RNAseq

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

text: not applicable

text: not applicable

text: adult

text: not applicable

text: Mexico: Estado de Mexico

text: Illumina HiSeq 4000

text: not applicable

text: 19.43799 N 100.17799 W

text: total RNA

text: Pseudoeurycea longicauda

characteristic: organism

text: SRMS001B_index2_CGATGT_L001_R1_001.fastq.gz

text: SRMS001B_index2_CGATGT_L001_R2_001.fastq.gz

text: not determined

characteristic: sex

text: Paired-end

text: not applicable

text: liver, heart, spleen, instestine, tail


Pseudoeurycea leprosa SMR2479

characteristic: External Id

characteristic: INSDC center name

text: live

text: RNAseq

characteristic: Library type

text: Model organism or animal

characteristic: SRA accession

text: not applicable

text: Sean Rovito, Julio Garcia Sanchez, Maria Segovia Ramirez, Gabriela Parra Olea, Ernesto Recuero, Omar Becerra

text: not applicable

text: adult

text: not applicable

text: Mexico: Estado de Mexico

text: Illumina HiSeq 4000

text: not applicable

characteristic: isolate

text: 19.01358 N 99.90027 W

text: total RNA

text: Pseudoeurycea leprosa

text: SRMS001C_index3_TTAGGC_L001_R1_001.fastq.gz

text: SRMS001C_index3_TTAGGC_L001_R2_001.fastq.gz

text: male

text: Paired-end

text: not applicable

characteristic: strain

text: liver, heart, spleen, instestine, tail

characteristic: title


Pseudoeurycea robertsi SMR2471

text: live

text: RNAseq

text: Model organism or animal

text: not applicable

characteristic: breed

text: Sean Rovito, Julio Garcia Sanchez, Maria Segovia Ramirez, Paco Barona Gomez

text: not applicable

characteristic: cultivar

text: subadult

text: not applicable

characteristic: ecotype

text: Mexico: Estado de Mexico

text: Illumina HiSeq 4000

characteristic: instrument model

text: not applicable

text: 19.18742 N 99.80638 W

text: total RNA

characteristic: molecule

text: Pseudoeurycea robertsi

text: SRMS001D_index4_TGACCA_L001_R2_001.fastq.gz

characteristic: raw file

text: SRMS001D_index4_TGACCA_L001_R1_001.fastq.gz

text: male

text: Paired-end

characteristic: single or paired-end

text: not applicable

text: liver, heart, spleen, instestine, tail


Pseudoeurycea leprosa SMR2522

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: RNAseq

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

text: not applicable

text: not applicable

text: adult

text: not applicable

text: Mexico: Estado de Mexico

text: Illumina HiSeq 4000

text: not applicable

text: 19.0629 N 99.33206 W

text: total RNA

text: Pseudoeurycea leprosa

text: SRMS001E_index5_ACAGTG_L001_R2_001.fastq.gz

text: SRMS001E_index5_ACAGTG_L001_R1_001.fastq.gz

text: not determined

text: Paired-end

text: not applicable

text: liver, heart, spleen, instestine, tail

characteristic: tissue


Pseudoeurycea leprosa SMR2523

characteristic: External Id

characteristic: INSDC center name

text: live

text: RNAseq

characteristic: Library type

text: Model organism or animal

characteristic: SRA accession

text: not applicable

text: not applicable

text: adult

text: not applicable

text: Mexico: Estado de Mexico

text: Illumina HiSeq 4000

text: not applicable

characteristic: isolate

text: 19.0629 N 99.33206 W

text: total RNA

text: Pseudoeurycea leprosa

characteristic: organism

text: SRMS001F_index6_GCCAAT_L001_R2_001.fastq.gz

text: SRMS001F_index6_GCCAAT_L001_R1_001.fastq.gz

text: not determined

characteristic: sex

text: Paired-end

text: not applicable

text: liver, heart, spleen, instestine, tail


Pseudoeurycea robertsi SMR2468

text: live

text: RNAseq

text: Model organism or animal

text: not applicable

characteristic: breed

text: not applicable

characteristic: cultivar

text: adult

text: not applicable

characteristic: ecotype

text: Mexico: Estado de Mexico

text: Illumina HiSeq 4000

characteristic: instrument model

text: not applicable

text: 19.18742 N 99.80638 W

text: total RNA

characteristic: molecule

text: Pseudoeurycea robertsi

text: SRMS001G_index7_CAGATC_L001_R2_001.fastq.gz

text: SRMS001G_index7_CAGATC_L001_R1_001.fastq.gz

text: male

text: Paired-end

text: not applicable

characteristic: strain

text: liver, heart, spleen, instestine, tail

characteristic: title


Pseudoeurycea altamontana SMR2487

text: Centro de Investigacion y de Estudios Avanzados del Instituto Politecnico Nacional

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: RNAseq

text: Model organism or animal

characteristic: NCBI submission model

text: not applicable

text: not applicable

text: adult

text: not applicable

text: Mexico: Estado de Mexico

text: Illumina HiSeq 4000

text: not applicable

text: 19.0629 N 99.33206 W

text: total RNA

text: Pseudoeurycea altamontana

text: SRMS001H_index8_ACTTGA_L001_R2_001.fastq.gz

characteristic: raw file

text: SRMS001H_index8_ACTTGA_L001_R1_001.fastq.gz

text: female

text: Paired-end

characteristic: single or paired-end

text: not applicable

text: liver, heart, spleen, instestine, tail


Pseudoeurycea altamontana SMR2489

characteristic: External Id

characteristic: INSDC center name

text: live

text: RNAseq

characteristic: Library type

text: Model organism or animal

characteristic: NCBI submission package

characteristic: SRA accession

text: not applicable

text: not applicable

text: adult

text: not applicable

text: Mexico: Estado de Mexico

text: Illumina HiSeq 4000

text: not applicable

characteristic: isolate

text: 19.0629 N 99.33206 W

text: total RNA

text: Pseudoeurycea altamontana

text: SRMS001I_index9_GATCAG_L001_R2_001.fastq.gz

text: SRMS001I_index9_GATCAG_L001_R1_001.fastq.gz

text: not determined

text: Paired-end

text: not applicable

text: liver, heart, spleen, instestine, tail

characteristic: tissue


Pseudoeurycea altamontana SMR2490

text: live

text: RNAseq

text: Model organism or animal

text: not applicable

characteristic: breed

text: Sean Rovito, Julio Garcia Sanchez, Maria Segovia Ramirez, Gabriela Parra Olea, Ernesto Recuero, Omar Becerra

text: not applicable

characteristic: cultivar

text: adult

text: not applicable

characteristic: ecotype

text: Mexico: Estado de Mexico

text: Illumina HiSeq 4000

characteristic: instrument model

text: not applicable

text: 19.0629 N 99.33206 W

text: total RNA

characteristic: molecule

text: Pseudoeurycea altamontana

characteristic: organism

text: SRMS001J_index10_TAGCTT_L001_R1_001.fastq.gz

text: SRMS001J_index10_TAGCTT_L001_R2_001.fastq.gz

text: female

characteristic: sex

text: Paired-end

text: not applicable

text: liver, heart, spleen, instestine, tail


Pseudoeurycea leprosa SMR2510

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: RNAseq

text: Model organism or animal

characteristic: NCBI submission model

text: not applicable

text: not applicable

text: adult

text: not applicable

text: Mexico: Estado de Mexico

text: Illumina HiSeq 4000

text: not applicable

text: 19.04676 N 99.31806 W

text: total RNA

text: Pseudoeurycea leprosa

text: SRMS001K_index11_GGCTAC_L001_R1_001.fastq.gz

text: SRMS001K_index11_GGCTAC_L001_R2_001.fastq.gz

text: female

text: Paired-end

text: not applicable

characteristic: strain

text: liver, heart, spleen, instestine, tail

characteristic: title


Pseudoeurycea leprosa SMR2482

characteristic: External Id

characteristic: INSDC center name

text: live

text: RNAseq

characteristic: Library type

text: Model organism or animal

characteristic: NCBI submission package

characteristic: SRA accession

text: not applicable

text: not applicable

text: adult

text: not applicable

text: Mexico: Estado de Mexico

text: Illumina HiSeq 4000

text: not applicable

text: 19.01358 N 99.90027 W

text: total RNA

text: Pseudoeurycea leprosa

text: SRMS001L_index12_CTTGTA_L001_R2_001.fastq.gz

characteristic: raw file

text: SRMS001L_index12_CTTGTA_L001_R1_001.fastq.gz

text: male

text: Paired-end

characteristic: single or paired-end

text: not applicable

text: liver, heart, spleen, instestine, tail


Pseudoeurycea altamontana SMR2488

text: live

text: RNAseq

text: Model organism or animal

text: not applicable

characteristic: breed

text: not applicable

characteristic: cultivar

text: subadult

text: not applicable

characteristic: ecotype

text: Mexico: Estado de Mexico

text: Illumina HiSeq 4000

characteristic: instrument model

text: not applicable

characteristic: isolate

text: 19.0629 N 99.33206 W

text: total RNA

characteristic: molecule

text: Pseudoeurycea altamontana

text: SRMS001M_index13_AGTCAA_L001_R2_001.fastq.gz

text: SRMS001M_index13_AGTCAA_L001_R1_001.fastq.gz

text: male

text: Paired-end

text: not applicable

text: liver, heart, spleen, instestine, tail

characteristic: tissue


Pseudoeurycea leprosa SMR2505

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: RNAseq

text: Model organism or animal

characteristic: NCBI submission model

text: not applicable

text: not applicable

text: adult

text: not applicable

text: Mexico: Estado de Mexico

text: Illumina HiSeq 4000

text: not applicable

text: 19.01358 N 99.90027 W

text: total RNA

text: Pseudoeurycea leprosa

characteristic: organism

text: SRMS001N_index14_AGTTCC_L001_R1_001.fastq.gz

text: SRMS001N_index14_AGTTCC_L001_R2_001.fastq.gz

text: not determined

characteristic: sex

text: Paired-end

text: not applicable

text: liver, heart, spleen, instestine, tail


Pseudoeurycea longicauda SMR2459

characteristic: External Id

characteristic: INSDC center name

text: live

text: RNAseq

characteristic: Library type

text: Model organism or animal

characteristic: NCBI submission package

characteristic: SRA accession

text: not applicable

text: Sean Rovito, Julio Garcia Sanchez, and Maria Segovia Ramirez

text: not applicable

text: adult

text: not applicable

text: Mexico: Estado de Mexico

text: Illumina HiSeq 4000

text: not applicable

text: 19.43799 N 100.17799 W

text: total RNA

text: Pseudoeurycea longicauda

text: SRMS001O_index15_ATGTCA_L001_R1_001.fastq.gz

text: SRMS001O_index15_ATGTCA_L001_R2_001.fastq.gz

text: female

text: Paired-end

text: not applicable

characteristic: strain

text: liver, heart, spleen, instestine, tail

characteristic: title


Pseudoeurycea longicauda SMR2462

text: Centro de Investigacion y de Estudios Avanzados del Instituto Politecnico Nacional

text: live

text: RNAseq

text: Model organism or animal

text: not applicable

characteristic: breed

text: not applicable

characteristic: cultivar

text: adult

text: not applicable

characteristic: ecotype

text: Mexico: Estado de Mexico

text: Illumina HiSeq 4000

characteristic: instrument model

text: not applicable

characteristic: isolate

text: 19.43799 N 100.17799 W

text: total RNA

text: Pseudoeurycea longicauda

text: SRMS001P_index16_CCGTCC_L001_R1_001.fastq.gz

characteristic: raw file

text: SRMS001P_index16_CCGTCC_L001_R2_001.fastq.gz

text: male

text: Paired-end

characteristic: single or paired-end

text: not applicable

text: liver, heart, spleen, instestine, tail


Pseudoeurycea longicauda SMR2463

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: RNAseq

text: Model organism or animal

characteristic: NCBI submission model

text: not applicable

text: not applicable

text: adult

text: not applicable

text: Mexico: Estado de Mexico

text: Illumina HiSeq 4000

text: not applicable

text: 19.43799 N 100.17799 W

text: total RNA

characteristic: molecule

text: Pseudoeurycea longicauda

text: SRMS001Q_index18_GTCCGC_L001_R2_001.fastq.gz

text: SRMS001Q_index18_GTCCGC_L001_R1_001.fastq.gz

text: male

text: Paired-end

text: not applicable

text: liver, heart, spleen, instestine, tail

characteristic: tissue


Pseudoeurycea robertsi SMR2469

characteristic: External Id

characteristic: INSDC center name

text: live

text: RNAseq

characteristic: Library type

text: Model organism or animal

characteristic: NCBI submission package

characteristic: SRA accession

text: not applicable

text: Sean Rovito, Julio Garcia Sanchez, Maria Segovia Ramirez, Paco Barona Gomez

text: not applicable

text: adult

text: not applicable

text: Mexico: Estado de Mexico

text: Illumina HiSeq 4000

text: not applicable

text: 19.18742 N 99.80638 W

text: total RNA

text: Pseudoeurycea robertsi

characteristic: organism

text: SRMS001R_index19_GTGAAA_L001_R2_001.fastq.gz

text: SRMS001R_index19_GTGAAA_L001_R1_001.fastq.gz

text: female

characteristic: sex

text: Paired-end

text: not applicable

text: liver, heart, spleen, instestine, tail


Pseudoeurycea robertsi SMR2470

text: live

text: RNAseq

text: Model organism or animal

text: not applicable

characteristic: breed

text: not applicable

characteristic: cultivar

text: adult

text: not applicable

characteristic: ecotype

text: Mexico: Estado de Mexico

text: Illumina HiSeq 4000

characteristic: instrument model

text: not applicable

characteristic: isolate

text: 19.18742 N 99.80638 W

text: total RNA

text: Pseudoeurycea robertsi

text: SRMS001S_index20_GTGGCC_L001_R2_001.fastq.gz

text: SRMS001S_index20_GTGGCC_L001_R1_001.fastq.gz

text: female

text: Paired-end

text: not applicable

characteristic: strain

text: liver, heart, spleen, instestine, tail

characteristic: title


Pseudoeurycea robertsi SMR2472

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: RNAseq

text: Model organism or animal

characteristic: NCBI submission model

text: not applicable

text: not applicable

text: adult

text: not applicable

text: Mexico: Estado de Mexico

text: Illumina HiSeq 4000

text: not applicable

text: 19.18742 N 99.80638 W

text: total RNA

text: Pseudoeurycea robertsi

text: SRMS001T_index21_GTTTCG_L001_R2_001.fastq.gz

characteristic: raw file

text: SRMS001T_index21_GTTTCG_L001_R1_001.fastq.gz

text: female

text: Paired-end

characteristic: single or paired-end

text: not applicable

text: liver, heart, spleen, instestine, tail


Pseudoeurycea robertsi SMR2473

characteristic: External Id

characteristic: INSDC center name

text: live

text: RNAseq

characteristic: Library type

text: Model organism or animal

characteristic: NCBI submission package

characteristic: SRA accession

text: not applicable

text: Sean Rovito, Julio Garcia Sanchez, Maria Segovia Ramirez, Gabriela Parra Olea, Ernesto Recuero, Omar Becerra

text: not applicable

text: subadult

text: not applicable

text: Mexico: Estado de Mexico

text: Illumina HiSeq 4000

text: not applicable

text: 19.01358 N 99.90027 W

text: total RNA

characteristic: molecule

text: Pseudoeurycea robertsi

text: SRMS001U_index22_CGTACG_L001_R1_001.fastq.gz

text: SRMS001U_index22_CGTACG_L001_R2_001.fastq.gz

text: not determined

text: Paired-end

text: not applicable

text: liver, heart, spleen, instestine, tail

characteristic: tissue


Pseudoeurycea altamontana SMR2500

text: live

text: RNAseq

text: Model organism or animal

text: not applicable

characteristic: breed

text: not applicable

characteristic: cultivar

text: subadult

text: not applicable

characteristic: ecotype

text: Mexico: Estado de Mexico

text: Illumina HiSeq 4000

characteristic: instrument model

text: not applicable

characteristic: isolate

text: 19.0629 N 99.33206 W

text: total RNA

text: Pseudoeurycea altamontana

characteristic: organism

text: SRMS001V_index23_GAGTGG_L001_R1_001.fastq.gz

text: SRMS001V_index23_GAGTGG_L001_R2_001.fastq.gz

text: not determined

characteristic: sex

text: Paired-end

text: not applicable

text: liver, heart, spleen, instestine, tail


Pseudoeurycea leprosa SMR2561

text: Centro de Investigacion y de Estudios Avanzados del Instituto Politecnico Nacional

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: RNAseq

text: Model organism or animal

characteristic: NCBI submission model

text: not applicable

text: Sean Rovito, Julio Garcia Sanchez, Maria Segovia Ramirez, Fernan Perez Galvez

text: not applicable

text: adult

text: not applicable

text: Mexico: Estado de Mexico

text: Illumina HiSeq 4000

text: not applicable

text: 18.91888 N 97.26543 W

text: total RNA

text: Pseudoeurycea leprosa

text: SRMS001W_index25_ACTGAT_L001_R2_001.fastq.gz

text: SRMS001W_index25_ACTGAT_L001_R1_001.fastq.gz

text: not determined

text: Paired-end

text: not applicable

characteristic: strain

text: liver, heart, spleen, instestine, tail

characteristic: title


Pseudoeurycea leprosa SMR2508

characteristic: External Id

characteristic: INSDC center name

text: live

text: RNAseq

characteristic: Library type

text: Model organism or animal

characteristic: NCBI submission package

characteristic: SRA accession

text: not applicable

text: not applicable

text: adult

text: not applicable

text: Mexico: Estado de Mexico

text: Illumina HiSeq 4000

text: not applicable

text: 19.04676 N 99.31806 W

text: total RNA

text: Pseudoeurycea leprosa

text: SRMS001X_index27_ATTCCT_L001_R2_001.fastq.gz

characteristic: raw file

text: SRMS001X_index27_ATTCCT_L001_R1_001.fastq.gz

text: male

text: Paired-end

characteristic: single or paired-end

text: not applicable

text: liver, heart, spleen, instestine, tail


Pseudoeurycea longicauda SMR2465

text: live

text: RNAseq

text: Model organism or animal

text: not applicable

characteristic: breed

text: Sean Rovito, Julio Garcia Sanchez, and Maria Segovia Ramirez

text: not applicable

characteristic: cultivar

text: adult

text: not applicable

characteristic: ecotype

text: Mexico: Estado de Mexico

text: Illumina HiSeq 4000

characteristic: instrument model

text: not applicable

characteristic: isolate

text: 19.41804 N 100.16151 W

text: total RNA

characteristic: molecule

text: Pseudoeurycea longicauda

text: SRMS002A_index1_ATCACG_L002_R2_001.fastq.gz

text: SRMS002A_index1_ATCACG_L002_R1_001.fastq.gz

text: not determined

text: Paired-end

text: not applicable

text: liver, heart, spleen, instestine, tail

characteristic: tissue


Pseudoeurycea leprosa SMR2485

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: RNAseq

text: Model organism or animal

characteristic: NCBI submission model

text: not applicable

text: not applicable

text: adult

text: not applicable

text: Mexico: Estado de Mexico

text: Illumina HiSeq 4000

text: not applicable

text: 19.01358 N 99.90027 W

text: total RNA

text: Pseudoeurycea leprosa

characteristic: organism

text: SRMS002B_index2_CGATGT_L002_R2_001.fastq.gz

text: SRMS002B_index2_CGATGT_L002_R1_001.fastq.gz

text: male

characteristic: sex

text: Paired-end

text: not applicable

text: liver, heart, spleen, instestine, tail


Pseudoeurycea leprosa SMR2493

characteristic: External Id

characteristic: INSDC center name

text: live

text: RNAseq

characteristic: Library type

text: Model organism or animal

characteristic: NCBI submission package

characteristic: SRA accession

text: not applicable

text: not applicable

text: adult

text: not applicable

text: Mexico: Estado de Mexico

text: Illumina HiSeq 4000

text: not applicable

text: 19.0629 N 99.33206 W

text: total RNA

text: Pseudoeurycea leprosa

text: SRMS002C_index3_TTAGGC_L002_R1_001.fastq.gz

text: SRMS002C_index3_TTAGGC_L002_R2_001.fastq.gz

text: not determined

text: Paired-end

text: not applicable

characteristic: strain

text: liver, heart, spleen, instestine, tail

characteristic: title


Pseudoeurycea leprosa SMR2504

text: live

text: RNAseq

text: Model organism or animal

text: not applicable

characteristic: breed

text: Sean Rovito, Julio Garcia Sanchez, Maria Segovia Ramirez, Gabriela Parra Olea, Ernesto Recuero, Omar Becerra

text: not applicable

characteristic: cultivar

text: adult

text: not applicable

characteristic: ecotype

text: Mexico: Estado de Mexico

text: Illumina HiSeq 4000

characteristic: instrument model

text: not applicable

characteristic: isolate

text: 19.01358 N 99.90027 W

text: total RNA

text: Pseudoeurycea leprosa

text: SRMS002D_index4_TGACCA_L002_R1_001.fastq.gz

characteristic: raw file

text: SRMS002D_index4_TGACCA_L002_R2_001.fastq.gz

text: male

text: Paired-end

characteristic: single or paired-end

text: not applicable

text: liver, heart, spleen, instestine, tail


Pseudoeurycea melanomolga SMR2532

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: RNAseq

text: Model organism or animal

characteristic: NCBI submission model

text: not applicable

text: not applicable

text: subadult

text: not applicable

text: Mexico: Veracruz

text: Illumina HiSeq 4000

text: not applicable

text: 19.59315 N 97.09306 W

text: total RNA

characteristic: molecule

text: Pseudoeurycea melanomolga

text: SRMS002E_index5_ACAGTG_L002_R1_001.fastq.gz

text: SRMS002E_index5_ACAGTG_L002_R2_001.fastq.gz

text: not determined

text: Paired-end

text: not applicable

text: liver, heart, spleen, instestine, tail

characteristic: tissue


Pseudoeurycea leprosa SMR2533

characteristic: External Id

text: Centro de Investigacion y de Estudios Avanzados del Instituto Politecnico Nacional

characteristic: INSDC center name

text: live

text: RNAseq

characteristic: Library type

text: Model organism or animal

characteristic: NCBI submission package

characteristic: SRA accession

text: not applicable

text: Sean Rovito, Julio Garcia Sanchez, Maria Segovia Ramirez, Fernan Perez Galvez

text: not applicable

text: subadult

text: not applicable

text: Mexico: Veracruz

text: Illumina HiSeq 4000

text: not applicable

text: 19.59315 N 97.09306 W

text: total RNA

text: Pseudoeurycea leprosa

characteristic: organism

text: SRMS002F_index6_GCCAAT_L002_R1_001.fastq.gz

text: SRMS002F_index6_GCCAAT_L002_R2_001.fastq.gz

text: not determined

characteristic: sex

text: Paired-end

text: not applicable

text: liver, heart, spleen, instestine, tail