text: The University of Adelaide

text: live

text: Generic

text: female

text: missing

text: MPSIIIA

text: missing

text: Danio rerio

text: brain

text: brain

text: Brain, AB, MPSIIIA, rep4 [22-00157_S13]


status: PUBLIC

characteristic: External Id

text: The University of Adelaide

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: female

tag: attribute

characteristic: Sex

text: missing

text: MPSIIIA

characteristic: genotype

text: missing

characteristic: home tank

text: Danio rerio

characteristic: organism

text: brain

text: brain

characteristic: tissue

text: Brain, AB, MPSIIIA, rep3 [22-00156_S12]

characteristic: title


text: The University of Adelaide

text: live

text: Generic

text: female

text: missing

text: MPSIIIB

text: missing

text: Danio rerio

text: brain

text: brain

text: Brain, AB, MPSIIIB, rep3 [22-00155_S11]


text: The University of Adelaide

text: live

text: Generic

text: female

text: missing

text: missing

text: Danio rerio

text: brain

text: brain

text: Brain, AB, sgsh_het, rep3 [22-00154_S10]


text: The University of Adelaide

text: live

text: Generic

text: female

text: missing

text: MPSIIIB

text: missing

text: Danio rerio

text: brain

text: brain

text: Brain, AB, MPSIIIB, rep2 [22-00153_S9]


text: The University of Adelaide

text: live

text: Generic

text: male

text: missing

text: missing

text: Danio rerio

text: brain

text: brain

text: Brain, AB, sgsh_het, rep2 [22-00152_S8]


text: The University of Adelaide

text: live

text: Generic

text: female

text: missing

text: WT

text: missing

text: Danio rerio

text: brain

text: brain

text: Brain, AB, WT, rep3 [22-00151_S7]


text: The University of Adelaide

text: live

text: Generic

text: female

text: missing

text: WT

text: missing

text: Danio rerio

text: brain

text: brain

text: Brain, AB, WT, rep2 [22-00150_S6]


text: The University of Adelaide

text: live

text: Generic

text: female

text: missing

text: missing

text: Danio rerio

text: brain

text: brain

text: Brain, AB, sgsh_het, rep1 [22-00148_S5]


text: The University of Adelaide

text: live

text: Generic

text: male

text: missing

text: MPSIIIA

text: missing

text: Danio rerio

text: brain

text: brain

text: Brain, AB, MPSIIIA, rep2 [22-00147_S4]


text: The University of Adelaide

text: live

text: Generic

text: female

text: missing

text: WT

text: missing

text: Danio rerio

text: brain

text: brain

text: Brain, AB, WT, rep1 [22-00145_S3]


text: The University of Adelaide

text: live

text: Generic

text: female

text: missing

text: MPSIIIA

text: missing

text: Danio rerio

text: brain

text: brain

text: Brain, AB, MPSIIIA, rep1 [22-00138_S2]


text: The University of Adelaide

text: live

text: Generic

text: male

text: missing

text: MPSIIIB

text: missing

text: Danio rerio

text: brain

text: brain

text: Brain, AB, MPSIIIB, rep1 [22-00136_S1]


text: PulseNet Next Generation Subtyping Methods Unit

text: live

text: Pathogen.cl

text: CDC

text: missing

text: USA

text: missing

characteristic: host

text: missing

text: missing

characteristic: isolate

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

characteristic: serovar

characteristic: strain

text: Salmonella enterica


characteristic: External Id

text: Wadsworth Center - NYS DOH

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: USA

text: clinical

text: Legionella pneumophila

text: pure culture


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

text: CDC

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: PulseNet

text: Texas Department of State Health Services

text: missing

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: Salmonella enterica


text: Dardik Lab, Surgery, Yale University School of Medicine

text: live

text: Generic

text: female

characteristic: Sex

text: 10 wk

characteristic: age

text: missing

text: missing

text: Mus musculus

text: inferior vena cava

text: Day 7

characteristic: time point

text: inferior vena cava

text: Sham, Female, Day 7, 3

text: Sham

characteristic: treatment


text: live

text: Generic

text: female

text: 10 wk

text: missing

text: missing

text: Mus musculus

characteristic: organism

text: inferior vena cava

text: Day 7

text: inferior vena cava

characteristic: tissue

text: Sham, Female, Day 7, 2

characteristic: title

text: Sham


text: live

text: Generic

text: female

text: 10 wk

text: missing

text: missing

text: Mus musculus

text: inferior vena cava

characteristic: strain

text: Day 7

text: inferior vena cava

text: Sham, Female, Day 7, 1

text: Sham


characteristic: External Id

text: live

text: Generic

text: male

text: 10 wk

text: missing

text: missing

text: Mus musculus

text: inferior vena cava

text: Day 7

text: inferior vena cava

text: Sham, Male, Day 7, 3

text: Sham


characteristic: INSDC center name

text: live

text: Generic

text: male

text: 10 wk

text: missing

text: missing

text: Mus musculus

text: inferior vena cava

text: Day 7

text: inferior vena cava

text: Sham, Male, Day 7, 2

text: Sham


characteristic: INSDC first public

text: live

text: Generic

text: male

text: 10 wk

text: missing

text: missing

text: Mus musculus

text: inferior vena cava

text: Day 7

text: inferior vena cava

text: Sham, Male, Day 7, 1

text: Sham


characteristic: INSDC last update

text: live

text: Generic

text: female

text: 10 wk

text: missing

text: missing

text: Mus musculus

text: inferior vena cava

text: Day 7

text: inferior vena cava

text: AVF, Female, Day 7, 3

text: AVF


characteristic: INSDC secondary accession

text: live

text: Generic

text: female

text: 10 wk

text: missing

text: missing

text: Mus musculus

text: inferior vena cava

text: Day 7

text: inferior vena cava

text: AVF, Female, Day 7, 2

text: AVF


text: live

characteristic: INSDC status

text: Generic

text: female

text: 10 wk

text: missing

text: missing

text: Mus musculus

text: inferior vena cava

text: Day 7

text: inferior vena cava

text: AVF, Female, Day 7, 1

text: AVF


text: live

text: Generic

characteristic: NCBI submission model

text: male

text: 10 wk

text: missing

text: missing

text: Mus musculus

text: inferior vena cava

text: Day 7

text: inferior vena cava

text: AVF, Male, Day 7, 3

text: AVF


text: live

text: Generic

characteristic: NCBI submission package

text: male

text: 10 wk

text: missing

text: missing

text: Mus musculus

text: inferior vena cava

text: Day 7

text: inferior vena cava

text: AVF, Male, Day 7, 2

text: AVF


text: live

text: Generic

characteristic: SRA accession

text: male

text: 10 wk

text: missing

text: missing

text: Mus musculus

text: inferior vena cava

text: Day 7

text: inferior vena cava

text: AVF, Male, Day 7, 1

text: AVF


Xylaria bambusicola

text: Temasek Life Sciences laboratories

text: live

text: MIGS.eu

text: MIGS/MIMS/MIMARKS.agriculture

text: plantation fields with sugarcane crop

text: not applicable

text: missing

characteristic: cultivar

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: not applicable

characteristic: ecotype

text: plantation soil-borne pathogen

text: sugarcane plantations

text: soil

text: sugarcane

text: Indonesia: Bandar Lampung

text: 7 months

text: sugarcane

text: Saccharum officinarum L.

text: not known

text: not known

text: adult plant stage

text: root and basal stem rot disease symptoms

text: unknown

text: Fungal mycelia and spores. Isolated and cultured on standard potato dextrose agar medium

text: GMP-LS

characteristic: isolate

text: 4.7096 S 105.2049 E

text: not recorded

text: weighing of mycelial mat prior to drying and storage.

text: Xylaria bambusicola

text: Six months

text: Gunung Madu Plantations, Bandar Lampung, Indonesia

text: mycelium samples collected from petridish containing potato dextrose medium

characteristic: sieving

text: sugarcane plantation soil

text: not determined

text: Xylaria sample stored as filter paper stocks for 6 months in freezer prior to cultivation for DNA extraction

text: 30 deg C

characteristic: temp

text: Xylaria species


text: University of Bonn

text: live

text: Plant

text: Bacteria 16S

text: 3 weeks

characteristic: age

text: Germany: Bonn

text: Zea mays

characteristic: organism

characteristic: replicate

text: Whole primary root

characteristic: tissue

text: Plant sample from Zea mays

characteristic: title


characteristic: External Id

text: University of Bonn

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Plant

text: Bacteria 16S

text: 3 weeks

text: rtcs

text: Germany: Bonn

text: Zea mays

text: Whole primary root

text: Plant sample from Zea mays


text: University of Bonn

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Plant

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Bacteria 16S

text: 10 weeks

text: Germany: Bonn

text: Zea mays

text: Whole primary root

text: Plant sample from Zea mays


text: University of Bonn

text: live

text: Plant

characteristic: SRA accession

text: Bacteria 16S

text: 10 weeks

text: rtcs

characteristic: cultivar

text: Germany: Bonn

text: Zea mays

text: Whole primary root

text: Plant sample from Zea mays


text: University of Bonn

text: live

text: Plant

text: RNA-seq

text: 3 weeks

text: Germany: Bonn

text: Zea mays

text: Whole primary root

text: Plant sample from Zea mays


text: University of Bonn

text: live

text: Plant

text: RNA-seq

text: 3 weeks

text: rtcs

text: Germany: Bonn

text: Zea mays

text: Whole primary root

text: Plant sample from Zea mays


text: University of Bonn

text: live

text: Plant

text: RNA-seq

text: 10 weeks

text: Germany: Bonn

text: Zea mays

text: Whole primary root

text: Plant sample from Zea mays


text: University of Bonn

text: live

text: Plant

text: RNA-seq

text: 10 weeks

text: rtcs

text: Germany: Bonn

text: Zea mays

text: Whole primary root

text: Plant sample from Zea mays


text: live

text: Pathogen.cl

text: CDC

text: missing

text: USA

text: missing

characteristic: host

text: missing

text: missing

characteristic: isolate

text: missing

text: missing

text: missing

text: Escherichia coli

text: missing

characteristic: serovar

characteristic: strain

text: Escherichia coli


text: live

text: Pathogen.cl

text: CDC

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

characteristic: organism

text: PulseNet

text: missing

text: human

text: Salmonella enterica


text: live

text: Pathogen.env

text: CT

text: missing

text: missing

text: chicken

text: missing

text: Escherichia coli

text: missing

text: Escherichia coli


text: live

text: Pathogen.env

text: CT

text: missing

text: missing

text: turkey

text: missing

text: Escherichia coli

text: missing

text: Escherichia coli


text: live

text: Pathogen.env

text: CT

text: missing

text: missing

text: beef

text: missing

text: Escherichia coli

text: missing

text: Escherichia coli


text: shaoxing people's hospital

text: live

text: Microbe, viral or environmental

text: missing

characteristic: altitude

text: China: Shaoxing

text: Homo sapiens

text: bile

text: Klebsiella pneumoniae

text: cell culture


text: shaoxing people's hospital

text: live

text: Microbe, viral or environmental

text: missing

text: China: Shaoxing

text: Homo sapiens

text: sputum

text: Klebsiella pneumoniae

text: cell culture

characteristic: title


characteristic: External Id

text: shaoxing people's hospital

text: live

text: Microbe, viral or environmental

text: missing

text: China: Shaoxing

text: Homo sapiens

text: urine

text: Klebsiella pneumoniae

text: cell culture


text: shaoxing people's hospital

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: missing

text: China: Shaoxing

text: Homo sapiens

text: blood

text: Klebsiella pneumoniae

text: cell culture


text: shaoxing people's hospital

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: missing

text: China: Shaoxing

text: Homo sapiens

text: blood

text: Klebsiella quasipneumoniae

text: cell culture


text: shaoxing people's hospital

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: missing

text: China: Shaoxing

text: Homo sapiens

text: sputum

text: Klebsiella quasipneumoniae

text: cell culture


text: shaoxing people's hospital

text: live

text: Microbe, viral or environmental

text: missing

text: China: Shaoxing

text: Homo sapiens

text: bile

text: Klebsiella variicola

text: cell culture


characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

text: CDC

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Shigella sonnei

text: missing

text: Shigella sonnei


text: Gastrointestinal Bacteria Reference Unit, Public Health England

text: live

characteristic: INSDC status

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio parahaemolyticus

text: None detected

text: Vibrio parahaemolyticus

text: Vibrio parahaemolyticus serovar Vibrio parahaemolyticus 882728


text: live

text: Pathogen.env

characteristic: NCBI submission model

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio parahaemolyticus

text: None detected

text: Vibrio parahaemolyticus

text: Vibrio parahaemolyticus serovar Vibrio parahaemolyticus 1726621


text: live

text: Pathogen.env

characteristic: NCBI submission package

text: PHE

text: United Kingdom: United Kingdom

text: Not available

text: other

text: Missing

text: Vibrio parahaemolyticus

text: Aeromonas veronii AER39

text: Vibrio parahaemolyticus

text: Vibrio parahaemolyticus serovar Vibrio parahaemolyticus 1838892


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: DP Marais Hospital wc DPM

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-6247/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-6247/2021

text: missing

text: Severe acute respiratory syndrome coronavirus 2

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service

text: Genomic Surveillance of SARS-CoV-2 in South Africa


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: New Somerset Hospital wc NSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-K139/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-K139/2021

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Ruyterwacht CDC wc RWC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-K629/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-K629/2021

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Reed Street CDC wc RSC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-L914/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-L914/2021

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Bellville South CDC wc BSX

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-L956/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-L956/2021

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Symphony Way CDC wc SYM

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-L985/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-L985/2021

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Worcester Hospital wc WOC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-M009/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-M009/2021

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Suurbraak Clinic wc SBP

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-M066/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-M066/2021

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Swellendam PHC Clinic wc SHC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-M319/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-M319/2021

text: missing

text: Severe acute respiratory syndrome coronavirus 2


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Gustrouw CDC wc GCH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-M323/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-M323/2021

text: missing

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service

text: Genomic Surveillance of SARS-CoV-2 in South Africa


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Buffeljagsrivier Clinic wc BBS

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-M328/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-M328/2021

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Graafwater Clinic wc GWC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-M333/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-M333/2021

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Parow CDC wc PHC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-M421/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-M421/2021

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Louwville Clinic wc LOU

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-M491/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-M491/2021

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Moorreesburg Clinic wc MRB

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-M509/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-M509/2021

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Malmesbury CDC wc MAW

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-M529/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-M529/2021

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Ruyterwacht CDC wc RWC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-M628/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-M628/2021

text: missing

text: Severe acute respiratory syndrome coronavirus 2


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Delft CHC wc DFP

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-M660/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-M660/2021

text: missing

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nomzamo CDC wc NMZ

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-M726/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-M726/2021

text: missing

text: Genomic Surveillance of SARS-CoV-2 in South Africa


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nomzamo CDC wc NMZ

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-M727/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-M727/2021

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Botrivier Clinic wc BRC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-M759/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-M759/2021

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Crossroads CDC wc CRC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-M968/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-M968/2021

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Worcester Hospital wc WOC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-N122/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-N122/2021

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: New Somerset Hospital wc NSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-N398/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-N398/2021

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: New Somerset Hospital wc NSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-N419/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-N419/2021

text: missing

text: Severe acute respiratory syndrome coronavirus 2


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Vredendal Hospital wc VRE

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-N530/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-N530/2021

text: missing

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: DP Marais Hospital wc DPM

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-N671/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-N671/2022

text: missing

text: Genomic Surveillance of SARS-CoV-2 in South Africa


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: DP Marais Hospital wc DPM

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-N951/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-N951/2022

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: DP Marais Hospital wc DPM

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-N952/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-N952/2022

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Helderberg Hospital wc HHH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-O164/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-O164/2021

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: DP Marais Hospital wc DPM

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-O281/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-O281/2022

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: New Somerset Hospital wc NSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-O312/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-O312/2022

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Lentegeur Hospital wc LGH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-O324/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-O324/2022

text: missing

text: Severe acute respiratory syndrome coronavirus 2


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Riebeeck West Corr Centre wc RAM

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-O339/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-O339/2022

text: missing

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: DP Marais Hospital wc DPM

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-O344/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-O344/2022

text: missing

text: Genomic Surveillance of SARS-CoV-2 in South Africa


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Paarl Hospital wc PAH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-O373/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-O373/2022

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Grabouw CDC wc GHC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-O413/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-O413/2022

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Swartland Hospital wc SWA

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-O478/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-O478/2022

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: TC Newman CDC wc TCN

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-O653/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-O653/2022

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Helderberg Hospital wc HHH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-P379/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-P379/2021

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mitchells Plain Hospital wc MPH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-Q674/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-Q674/2022

text: missing

text: Severe acute respiratory syndrome coronavirus 2


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Worcester Hospital wc WOC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-Q966/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-Q966/2022

text: missing

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: New Somerset Hospital wc NSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-Q976/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-Q976/2022

text: missing

text: Genomic Surveillance of SARS-CoV-2 in South Africa


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Helderberg Hospital wc HHH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-R001/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-R001/2022

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Stellenbosch Hospital wc STB

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-R008/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-R008/2022

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: New Somerset Hospital wc NSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-R011/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-R011/2022

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Swartland Hospital wc SWA

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-R018/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-R018/2022

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Worcester Hospital wc WOC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-R070/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-R070/2022

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: New Somerset Hospital wc NSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-R079/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-R079/2022

text: missing

text: Severe acute respiratory syndrome coronavirus 2


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Caledon Hospital wc CLD

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-R162/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-R162/2022

text: missing

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Du Noon CDC wc DNC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-R175/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-R175/2022

text: missing

text: Genomic Surveillance of SARS-CoV-2 in South Africa


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Robertson Hospital wc ROB

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-R190/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-R190/2022

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Paarl Hospital wc PAH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-R203/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-R203/2022

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Du Noon CDC wc DNC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-R282/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-R282/2022

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Vredenburg Hospital wc VBG

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-R294/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-R294/2022

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Ikhwezi CDC wc IKW

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-R800/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-R800/2022

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Brooklyn Chest Hospital wc BCH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-T208/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-T208/2022

text: missing

text: Severe acute respiratory syndrome coronavirus 2


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Paarl Hospital wc PAH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-T264/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-T264/2022

text: missing

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Valkenberg Hospital wc VBH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-T276/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-T276/2022

text: missing

text: Genomic Surveillance of SARS-CoV-2 in South Africa


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Helderberg Hospital wc HHH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-T326/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-T326/2022

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Du Noon CDC wc DNC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-T538/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-T538/2022

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Hermanus Hospital wc HER

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-T644/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-T644/2022

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Grabouw CDC wc GHC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-T694/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-T694/2022

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Du Noon CDC wc DNC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-T811/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-T811/2022

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Klawer Clinic wc KCH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-T978/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-T978/2022

text: missing

text: Severe acute respiratory syndrome coronavirus 2


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Kylemore Clinic wc KYL

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-U257/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-U257/2022

text: missing

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Kwamandlenkosi Clinic wc KMN

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-1016/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-1016/2020

text: missing

text: Genomic Surveillance of SARS-CoV-2 in South Africa


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Heideveld Emergency Centre

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-2367/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-2367/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Victoria Hospital wc VHW

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-2468/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-2468/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Vanguard CHC wc VGC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-2485/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-2485/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Red Cross Children's Hospital wc RXH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-2509/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-2509/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-2529/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-2529/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Victoria Hospital wc VHW

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-2530/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-2530/2020

text: missing

text: Severe acute respiratory syndrome coronavirus 2


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Guguletu CHC wc GDH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-2531/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-2531/2020

text: missing

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mitchells Plain Hospital wc MPH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-2536/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-2536/2020

text: missing

text: Genomic Surveillance of SARS-CoV-2 in South Africa


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Victoria Hospital wc VHW

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-2538/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-2538/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Victoria Hospital wc VHW

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-2568/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-2568/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-2586/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-2586/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-2667/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-2667/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mitchells Plain Hospital wc MPH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-2708/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-2708/2020

text: missing


text: Gastrointestinal Bacteria Reference Unit, Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio parahaemolyticus

text: None detected

text: Vibrio parahaemolyticus

text: Vibrio parahaemolyticus serovar Vibrio parahaemolyticus 1730834


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio parahaemolyticus

text: None detected

text: Vibrio parahaemolyticus

text: Vibrio parahaemolyticus serovar Vibrio parahaemolyticus 896997


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Not available

text: other

text: Missing

text: Vibrio parahaemolyticus

text: None detected

text: Vibrio parahaemolyticus

text: Vibrio parahaemolyticus serovar Vibrio parahaemolyticus 01134953


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio parahaemolyticus

text: None detected

text: Novel

text: Vibrio parahaemolyticus

text: Vibrio parahaemolyticus serovar Vibrio parahaemolyticus 1533088


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio parahaemolyticus

text: None detected

text: Vibrio parahaemolyticus

text: Vibrio parahaemolyticus serovar Vibrio parahaemolyticus 01236585


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Not available

text: other

text: Missing

text: Vibrio parahaemolyticus

text: None detected

text: Vibrio parahaemolyticus

text: Vibrio parahaemolyticus serovar Vibrio parahaemolyticus 01134952


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio parahaemolyticus

text: None detected

text: Vibrio parahaemolyticus

text: Vibrio parahaemolyticus serovar Vibrio parahaemolyticus 1826065


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Not available

text: other

text: Missing

text: Vibrio parahaemolyticus

text: None detected

text: Vibrio parahaemolyticus

text: Vibrio parahaemolyticus serovar Vibrio parahaemolyticus 1689016


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio parahaemolyticus

text: None detected

text: Vibrio parahaemolyticus

text: Vibrio parahaemolyticus serovar Vibrio parahaemolyticus 01171494


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio parahaemolyticus

text: None detected

text: Vibrio parahaemolyticus

text: Vibrio parahaemolyticus serovar Vibrio parahaemolyticus 859970


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio parahaemolyticus

text: None detected

text: Vibrio parahaemolyticus

text: Vibrio parahaemolyticus serovar Vibrio parahaemolyticus 1700391


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio parahaemolyticus

text: None detected

text: Vibrio parahaemolyticus

text: Vibrio parahaemolyticus serovar Vibrio parahaemolyticus 01195536


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio parahaemolyticus

text: None detected

text: Vibrio parahaemolyticus

text: Vibrio parahaemolyticus serovar Vibrio parahaemolyticus 1696378


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio parahaemolyticus

text: None detected

text: NOVEL allele. cannot determine closest ST (SLV)

text: Vibrio parahaemolyticus

text: Vibrio parahaemolyticus serovar Vibrio parahaemolyticus 1522164


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio parahaemolyticus

text: None detected

text: Vibrio parahaemolyticus

text: Vibrio parahaemolyticus serovar Vibrio parahaemolyticus 882739


text: Gastrointestinal Bacteria Reference Unit, Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio parahaemolyticus

text: None detected

text: Novel

text: Vibrio parahaemolyticus

text: Vibrio parahaemolyticus serovar Vibrio parahaemolyticus 01209212


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio parahaemolyticus

text: None detected

text: Vibrio parahaemolyticus

text: Vibrio parahaemolyticus serovar Vibrio parahaemolyticus 876061


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Not available

text: other

text: Missing

text: Vibrio parahaemolyticus

text: None detected

text: Vibrio parahaemolyticus

text: Vibrio parahaemolyticus serovar Vibrio parahaemolyticus 1729731


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio parahaemolyticus

text: None detected

text: Vibrio parahaemolyticus

text: Vibrio parahaemolyticus serovar Vibrio parahaemolyticus 882743


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio parahaemolyticus

text: None detected

text: Vibrio parahaemolyticus

text: Vibrio parahaemolyticus serovar Vibrio parahaemolyticus 1702908


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio parahaemolyticus

text: None detected

text: Vibrio parahaemolyticus

text: Vibrio parahaemolyticus serovar Vibrio parahaemolyticus 1702883


text: PulseNet Next Generation Subtyping Methods Unit

text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Campylobacter jejuni

text: missing

text: Campylobacter jejuni


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio parahaemolyticus

text: None detected

text: Vibrio parahaemolyticus

text: Vibrio parahaemolyticus serovar Vibrio parahaemolyticus 917851


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio parahaemolyticus

text: Campylobacter jejuni NCTC 11168 BN148 uid174152

text: Vibrio parahaemolyticus

text: Vibrio parahaemolyticus serovar Vibrio parahaemolyticus 01120267


text: live

text: Pathogen.cl

text: CDC

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Shigella flexneri

text: PulseNet

text: Vermont Department of Health

text: missing

text: human

text: Shigella flexneri


text: live

text: Pathogen.cl

text: CDC

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Campylobacter jejuni

text: missing

text: Campylobacter jejuni


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Novel

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 01214638


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 882741


text: live

text: Pathogen.env

text: CT

text: missing

text: missing

text: chicken

text: missing

text: Salmonella enterica

text: missing

text: Salmonella enterica


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 882772


text: live

text: Pathogen.env

text: CT

text: missing

text: missing

text: turkey

text: missing

text: Salmonella enterica

text: missing

text: Salmonella enterica


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 882768


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 01144581


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 01213065


text: Gastrointestinal Bacteria Reference Unit, Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Novel

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 851890


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Not available

text: other

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1375618


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 882791


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Novel

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1363149


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Not available

text: other

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1312539


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Not available

text: other

text: Missing

text: Vibrio cholerae

text: None detected

text: Novel

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1829112


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1686855


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Novel

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1791494


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Novel

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 857205


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 01232156


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Novel

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1622308


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1876351


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1740832


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 01218846


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Novel

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1844967


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 01230138


text: Gastrointestinal Bacteria Reference Unit, Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1775757


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Novel

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 01231589


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Novel

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1488378


text: PulseNet Next Generation Subtyping Methods Unit

text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: enteritidis

text: human

text: Salmonella enterica


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Novel

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 851858


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1051429


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Novel

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 01205024


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 882745


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 882777


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: Vibrio parahaemolyticus RIMD 2210633 uid57969

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 882773


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 954439


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Novel

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 01158437


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 882810


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1654047


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1540549


text: Gastrointestinal Bacteria Reference Unit, Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 882811


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Novel

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1306283


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 01202169


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1771115


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 01223868


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Novel

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 01236330


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: Escherichia coli IAI1 uid59377

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1507484


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Novel

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1057338


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1588328


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Novel

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 01233747


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1903301


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Novel

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 905461


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1614951


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Novel

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1758459


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 01182831


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Novel

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 880014


text: Gastrointestinal Bacteria Reference Unit, Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 882748


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1875420


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 01182832


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Novel

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1755827


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 882809


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1664663


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 882795


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 859941


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: Escherichia coli IAI1 uid59377

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1502172


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 882771


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Not available

text: other

text: Missing

text: Vibrio cholerae

text: None detected

text: Novel

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1830864


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 01241637


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: NOVEL allele. Closest ST:842(SLV)

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1651147


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 882749


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Not available

text: other

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1689079


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: Salmonella enterica subsp I enterica

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 907290


text: Gastrointestinal Bacteria Reference Unit, Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1700397


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 01232116


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Novel

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1106030


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Not available

text: food

text: Missing

text: Vibrio cholerae

text: None detected

text: Novel

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1690845


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 01200093


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 01216946


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Novel

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1842128


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Novel

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1731608


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Novel

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 01228699


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: Enterobacter cloacae subsp. cloacae GS1

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1540525


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1619887


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1533649


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Novel

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1324273


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 01200202


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 882740


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 963727


text: Gastrointestinal Bacteria Reference Unit, Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 893937


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 01230139


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Novel

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1671593


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Novel

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1571849


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 912520


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1008756


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Novel

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1137963


text: PulseNet Next Generation Subtyping Methods Unit

text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Javiana

text: human

text: Salmonella enterica


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: NOVEL alleles. cannot determine closest ST (DLV)

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 877927


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Braenderup

text: human

text: Salmonella enterica


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1703545


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Mississippi

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: indiana

text: human

text: Salmonella enterica


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: Morganella morganii subsp. morganii KT

text: Novel

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1682950


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: enteritidis

text: human

text: Salmonella enterica


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Novel

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1673884


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Newport

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Typhimurium

text: human

text: Salmonella enterica


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Novel

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1820151


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Novel

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1726682


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 1838893


text: Gastrointestinal Bacteria Reference Unit, Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Vibrio cholerae

text: None detected

text: Vibrio cholerae

text: Vibrio cholerae serovar Vibrio cholerae 01139888


text: KTH Royal Institute of Technology

text: live

text: Plant

text: 6 months

characteristic: age

text: Derek Lundberg

text: Outdoor-grown crude extract (leaf A) on a 100%-16S array

characteristic: description

characteristic: ecotype

text: Germany: Tubingen

text: Arabidopsis thaliana

text: Biological replicate A -16S-array

characteristic: replicate

text: RNA extract

text: Leaf

characteristic: tissue

text: Plant sample from Arabidopsis thaliana

characteristic: treatment


text: KTH Royal Institute of Technology

text: live

text: Plant

text: 6 months

text: Derek Lundberg

text: Outdoor-grown crude extract (leaf A) for 16S amplicon sequencing using primers 799F-1192R

text: Germany: Tubingen

text: Arabidopsis thaliana

characteristic: organism

text: Biological replicate A -16S-(799F-1192R)

text: DNA extract

text: Leaf

text: Plant sample from Arabidopsis thaliana


text: KTH Royal Institute of Technology

text: live

text: Plant

text: 6 months

text: Derek Lundberg

text: Outdoor-grown crude extract (leaf A) for 16S amplicon sequencing using primers 515F-806R

text: Germany: Tubingen

text: Arabidopsis thaliana

text: Biological replicate A -16S-(515F-806R)

text: DNA extract

text: Leaf

text: Plant sample from Arabidopsis thaliana

characteristic: title


characteristic: External Id

text: KTH Royal Institute of Technology

text: live

text: Plant

text: 6 months

text: Derek Lundberg

text: Outdoor-grown crude extract (leaf B) on a 100%-16S array

text: Germany: Tubingen

text: Arabidopsis thaliana

text: Biological replicate B -16S-array

text: RNA extract

text: Leaf

text: Plant sample from Arabidopsis thaliana


text: KTH Royal Institute of Technology

characteristic: INSDC center name

text: live

text: Plant

text: 6 months

text: Derek Lundberg

text: Outdoor-grown crude extract (leaf B) for 16S amplicon sequencing using primers 799F-1192R

text: Germany: Tubingen

text: Arabidopsis thaliana

text: Biological replicate B -16S-(799F-1192R)

text: DNA extract

text: Leaf

text: Plant sample from Arabidopsis thaliana


text: KTH Royal Institute of Technology

characteristic: INSDC first public

text: live

text: Plant

text: 6 months

text: Derek Lundberg

text: Outdoor-grown crude extract (leaf B) for 16S amplicon sequencing using primers 515F-806R

text: Germany: Tubingen

text: Arabidopsis thaliana

text: Biological replicate B -16S-(515F-806R)

text: DNA extract

text: Leaf

text: Plant sample from Arabidopsis thaliana


text: KTH Royal Institute of Technology

characteristic: INSDC last update

text: live

text: Plant

text: 6 months

text: Derek Lundberg

text: Outdoor-grown crude extract (leaf C) on a 100%-16S array

text: Germany: Tubingen

text: Arabidopsis thaliana

text: Biological replicate C -16S-array

text: RNA extract

text: Leaf

text: Plant sample from Arabidopsis thaliana


text: KTH Royal Institute of Technology

characteristic: INSDC secondary accession

text: live

text: Plant

text: 6 months

text: Derek Lundberg

text: Outdoor-grown crude extract (leaf C) for 16S amplicon sequencing using primers 515F-806R

text: Germany: Tubingen

text: Arabidopsis thaliana

text: Biological replicate C -16S-(515F-806R)

text: DNA extract

text: Leaf

text: Plant sample from Arabidopsis thaliana


text: KTH Royal Institute of Technology

text: live

characteristic: INSDC status

text: Plant

text: 6 months

text: Derek Lundberg

text: Outdoor-grown crude extract (leaf D) on a 100%-16S array

text: Germany: Tubingen

text: Arabidopsis thaliana

text: Biological replicate D -16S-array

text: RNA extract

text: Leaf

text: Plant sample from Arabidopsis thaliana


text: KTH Royal Institute of Technology

text: live

text: Plant

characteristic: NCBI submission model

text: 6 months

text: Derek Lundberg

text: Outdoor-grown crude extract (leaf D) for 16S amplicon sequencing using primers 799F-1192R

text: Germany: Tubingen

text: Arabidopsis thaliana

text: Biological replicate D -16S-(799F-1192R)

text: DNA extract

text: Leaf

text: Plant sample from Arabidopsis thaliana


text: KTH Royal Institute of Technology

text: live

text: Plant

characteristic: NCBI submission package

text: 6 months

text: Derek Lundberg

text: Outdoor-grown crude extract (leaf D) for 16S amplicon sequencing using primers 515F-806R

text: Germany: Tubingen

text: Arabidopsis thaliana

text: Biological replicate D -16S-(515F-806R)

text: DNA extract

text: Leaf

text: Plant sample from Arabidopsis thaliana


text: KTH Royal Institute of Technology

text: live

text: Plant

characteristic: SRA accession

text: 34 days

text: Or Shalev

text: Outdoor-grown plant 1 - leaf 1 - section 1 on a 45%-16S, 45%-ITS, 10%-poly(d)T array

text: Germany: Tubingen

text: Arabidopsis thaliana

text: Biological replicate-P1-L1-S1

text: Tissue section

text: Leaf

text: Plant sample from Arabidopsis thaliana


text: KTH Royal Institute of Technology

text: live

text: Plant

text: 34 days

characteristic: age

text: Or Shalev

text: Outdoor-grown plant 1 - leaf 1 - section 2 on a 45%-16S, 45%-ITS, 10%-poly(d)T array

text: Germany: Tubingen

text: Arabidopsis thaliana

text: Biological replicate-P1-L1-S2

text: Tissue section

text: Leaf

text: Plant sample from Arabidopsis thaliana


text: KTH Royal Institute of Technology

text: live

text: Plant

text: 34 days

text: Or Shalev

text: Outdoor-grown plant 1 - leaf 1 - section 4 on a 45%-16S, 45%-ITS, 10%-poly(d)T array

characteristic: description

text: Germany: Tubingen

text: Arabidopsis thaliana

text: Biological replicate-P1-L1-S4

text: Tissue section

text: Leaf

text: Plant sample from Arabidopsis thaliana


text: KTH Royal Institute of Technology

text: live

text: Plant

text: 34 days

text: Or Shalev

text: Outdoor-grown plant 1 - leaf 2 - section 1 on a 45%-16S, 45%-ITS, 10%-poly(d)T array

characteristic: ecotype

text: Germany: Tubingen

text: Arabidopsis thaliana

text: Biological replicate-P1-L2-S1

text: Tissue section

text: Leaf

text: Plant sample from Arabidopsis thaliana


text: KTH Royal Institute of Technology

text: live

text: Plant

text: 34 days

text: Or Shalev

text: Outdoor-grown plant 1 - leaf 2 - section 2 on a 45%-16S, 45%-ITS, 10%-poly(d)T array

text: Germany: Tubingen

text: Arabidopsis thaliana

text: Biological replicate-P1-L2-S2

characteristic: replicate

text: Tissue section

text: Leaf

text: Plant sample from Arabidopsis thaliana


text: KTH Royal Institute of Technology

text: live

text: Plant

text: 34 days

text: Or Shalev

text: Outdoor-grown plant 1 - leaf 2 - section 4 on a 45%-16S, 45%-ITS, 10%-poly(d)T array

text: Germany: Tubingen

text: Arabidopsis thaliana

text: Biological replicate-P1-L2-S4

text: Tissue section

text: Leaf

characteristic: tissue

text: Plant sample from Arabidopsis thaliana


text: KTH Royal Institute of Technology

text: live

text: Plant

text: 34 days

text: Or Shalev

text: Outdoor-grown plant 2- leaf 1 - section 1 on a 45%-16S, 45%-ITS, 10%-poly(d)T array

text: Germany: Tubingen

text: Arabidopsis thaliana

text: Biological replicate-P2-L1-S1

text: Tissue section

text: Leaf

text: Plant sample from Arabidopsis thaliana

characteristic: treatment


text: KTH Royal Institute of Technology

text: live

text: Plant

text: 34 days

text: Or Shalev

text: Outdoor-grown plant 2- leaf 1 - section 3 on a 45%-16S, 45%-ITS, 10%-poly(d)T array

text: Germany: Tubingen

text: Arabidopsis thaliana

characteristic: organism

text: Biological replicate-P2-L1-S3

text: Tissue section

text: Leaf

text: Plant sample from Arabidopsis thaliana


text: KTH Royal Institute of Technology

text: live

text: Plant

text: 34 days

text: Or Shalev

text: Outdoor-grown plant 2- leaf 1 - section 4 on a 45%-16S, 45%-ITS, 10%-poly(d)T array

text: Germany: Tubingen

text: Arabidopsis thaliana

text: Biological replicate-P2-L1-S4

text: Tissue section

text: Leaf

text: Plant sample from Arabidopsis thaliana

characteristic: title


characteristic: External Id

text: KTH Royal Institute of Technology

text: live

text: Plant

text: 34 days

text: Or Shalev

text: Outdoor-grown plant 2- leaf 2 - section 1 on a 45%-16S, 45%-ITS, 10%-poly(d)T array

text: Germany: Tubingen

text: Arabidopsis thaliana

text: Biological replicate-P2-L2-S1

text: Tissue section

text: Leaf

text: Plant sample from Arabidopsis thaliana


text: KTH Royal Institute of Technology

characteristic: INSDC center name

text: live

text: Plant

text: 34 days

text: Or Shalev

text: Outdoor-grown plant 2- leaf 2 - section 2 on a 45%-16S, 45%-ITS, 10%-poly(d)T array

text: Germany: Tubingen

text: Arabidopsis thaliana

text: Biological replicate-P2-L2-S2

text: Tissue section

text: Leaf

text: Plant sample from Arabidopsis thaliana


text: KTH Royal Institute of Technology

characteristic: INSDC first public

text: live

text: Plant

text: 34 days

text: Or Shalev

text: Outdoor-grown plant 2- leaf 2 - section 3 on a 45%-16S, 45%-ITS, 10%-poly(d)T array

text: Germany: Tubingen

text: Arabidopsis thaliana

text: Biological replicate-P2-L2-S3

text: Tissue section

text: Leaf

text: Plant sample from Arabidopsis thaliana


text: KTH Royal Institute of Technology

characteristic: INSDC last update

text: live

text: Plant

text: 34 days

text: Or Shalev

text: Outdoor-grown plant 2- leaf 2 - section 4 on a 45%-16S, 45%-ITS, 10%-poly(d)T array

text: Germany: Tubingen

text: Arabidopsis thaliana

text: Biological replicate-P2-L2-S4

text: Tissue section

text: Leaf

text: Plant sample from Arabidopsis thaliana


text: KTH Royal Institute of Technology

characteristic: INSDC secondary accession

text: live

text: Plant

text: 10 days

text: Jens Sundstrm, Department of Plant Biology at the Swedish University of Agricultural Sciences (SLU), Uppsala, Sweden

text: Sami Saarenp

text: Sterile leaf batch 1, three leaves

text: Sweden: Uppsala

text: Arabidopsis thaliana

text: Biological replicate-001-section

text: Tissue section

text: Leaf

text: Plant sample from Arabidopsis thaliana

text: Sterilized growth environment


text: KTH Royal Institute of Technology

text: live

characteristic: INSDC status

text: Plant

text: 10 days

text: Sami Saarenp

text: Sterile leaf batch 2, five leaves

text: Sweden: Uppsala

text: Arabidopsis thaliana

text: Biological replicate-002-section

text: Tissue section

text: Leaf

text: Plant sample from Arabidopsis thaliana

text: Sterilized growth environment


text: KTH Royal Institute of Technology

text: live

text: Plant

characteristic: NCBI submission model

text: 10 days

text: Sami Saarenp

text: Sterile leaf batch 1, three leaves

text: Sweden: Uppsala

text: Arabidopsis thaliana

text: Biological replicate-001-extract

text: RNA extract

text: Leaf

text: Plant sample from Arabidopsis thaliana

text: Sterilized growth environment


text: KTH Royal Institute of Technology

text: live

text: Plant

characteristic: NCBI submission package

text: 10 days

text: Sami Saarenp

text: Sterile leaf batch 2, five leaves

text: Sweden: Uppsala

text: Arabidopsis thaliana

text: Biological replicate-002-extract

text: RNA extract

text: Leaf

text: Plant sample from Arabidopsis thaliana

text: Sterilized growth environment


text: PulseNet Next Generation Subtyping Methods Unit

text: live

text: Pathogen.cl

characteristic: SRA accession

text: CDC

text: missing

text: missing

characteristic: host

text: missing

text: missing

characteristic: isolate

text: missing

text: missing

text: missing

text: Escherichia coli

text: missing

characteristic: serovar

characteristic: strain

text: Escherichia coli


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Shigella flexneri

text: missing

text: Shigella flexneri


text: live

text: Pathogen.env

text: MA

text: missing

text: missing

text: missing

text: Chicken Gizzard

text: missing

text: Campylobacter coli

text: missing

text: Campylobacter coli


text: live

text: Pathogen.env

text: MA

text: USA:MA

text: missing

text: missing

text: Chicken Liver

text: missing

text: Campylobacter jejuni

text: missing

text: Campylobacter jejuni


text: live

text: Pathogen.cl

text: CDC

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Listeria monocytogenes

text: missing

text: Listeria monocytogenes


text: live

text: Pathogen.cl

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Escherichia coli

text: missing

text: missing

text: missing

text: human

text: Escherichia coli


text: live

text: Pathogen.cl

text: CDC

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: missing

text: human

text: Salmonella enterica


text: Berlin Center for Genomics in Biodiversity Research

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.host-associated

text: not collected

text: Keywords: GSC:MIxS;MIMS:6.0

characteristic: description

text: ecological community

text: multicellular organism

text: not collected

text: not collected

text: Xanthogaleruca luteola

characteristic: identifier

text: not collected

text: beetle metagenome

text: MIMS Environmental/Metagenome sample from beetle metagenome


text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.host-associated

text: not collected

text: Keywords: GSC:MIxS;MIMS:6.0

text: ecological community

text: multicellular organism

text: not collected

text: not collected

text: Xanthogaleruca luteola

text: not collected

text: plant metagenome

characteristic: organism

text: MIMS Environmental/Metagenome sample from plant metagenome


text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.host-associated

text: not collected

text: Keywords: GSC:MIxS;MIMS:6.0

text: ecological community

text: multicellular organism

text: not collected

text: not collected

text: Ulmus minor

text: not collected

text: plant metagenome

characteristic: title


characteristic: External Id

text: Broad Institute

text: live

text: SARS-CoV-2: clinical or host-associated

text: Broad Institute

text: Rapid test swab (iHealth)

text: USA: Massachusetts

text: Homo sapiens

text: nasopharyngeal

text: Technology Development

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: Broad Institute

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: Broad Institute

text: Rapid test swab (iHealth)

text: USA: Massachusetts

text: Homo sapiens

text: nasopharyngeal

text: Severe acute respiratory syndrome coronavirus 2

text: Technology Development


text: Mayo Clinic

characteristic: INSDC first public

text: live

text: Generic

text: Biopsy

characteristic: cell type

text: missing

text: Benign Breast Disease

characteristic: genotype

text: missing

text: Homo sapiens

text: Breast

text: Breast

characteristic: tissue

text: Benign Breast Disease Biopsy FFPE [sample9]


text: Mayo Clinic

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Biopsy

text: missing

text: Benign Breast Disease

text: missing

text: Homo sapiens

text: Breast

text: Breast

text: Benign Breast Disease Biopsy FFPE [sample8]


text: Mayo Clinic

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Biopsy

text: missing

text: Benign Breast Disease

text: missing

text: Homo sapiens

text: Breast

text: Breast

text: Benign Breast Disease Biopsy FFPE [sample7]


text: Mayo Clinic

text: live

text: Generic

text: Biopsy

text: missing

text: Benign Breast Disease

text: missing

text: Homo sapiens

text: Breast

text: Breast

text: Benign Breast Disease Biopsy Fresh Frozen [sample69_FFzn_Exome]


text: Mayo Clinic

text: live

text: Generic

text: Biopsy

text: missing

text: Benign Breast Disease

text: missing

text: Homo sapiens

text: Breast

text: Breast

text: Benign Breast Disease Biopsy FFPE [sample69_FFPE_Exome]


text: Mayo Clinic

text: live

text: Generic

text: Biopsy

text: missing

text: Benign Breast Disease

text: missing

text: Homo sapiens

text: Breast

text: Breast

text: Benign Breast Disease Biopsy FFPE [sample69_FFPE_Depletion]


text: Mayo Clinic

text: live

text: Generic

text: Biopsy

text: missing

text: Benign Breast Disease

text: missing

text: Homo sapiens

text: Breast

text: Breast

text: Benign Breast Disease Biopsy Fresh Frozen [sample68_FFzn_Exome]


text: Mayo Clinic

text: live

text: Generic

text: Biopsy

text: missing

text: Benign Breast Disease

text: missing

text: Homo sapiens

text: Breast

text: Breast

text: Benign Breast Disease Biopsy Fresh Frozen [sample68_FFzn_Depletion]


text: Mayo Clinic

text: live

text: Generic

text: Biopsy

text: missing

text: Benign Breast Disease

text: missing

text: Homo sapiens

text: Breast

text: Breast

text: Benign Breast Disease Biopsy FFPE [sample68_FFPE_Exome]


text: Mayo Clinic

text: live

text: Generic

text: Biopsy

text: missing

text: Benign Breast Disease

text: missing

text: Homo sapiens

text: Breast

text: Breast

text: Benign Breast Disease Biopsy FFPE [sample68_FFPE_Depletion]


text: Mayo Clinic

text: live

text: Generic

text: Biopsy

text: missing

text: Benign Breast Disease

text: missing

text: Homo sapiens

text: Breast

text: Breast

text: Benign Breast Disease Biopsy Fresh Frozen [sample67_FFzn_Exome]


text: Mayo Clinic

text: live

text: Generic

text: Biopsy

text: missing

text: Benign Breast Disease

text: missing

text: Homo sapiens

text: Breast

text: Breast

text: Benign Breast Disease Biopsy Fresh Frozen [sample67_FFzn_Depletion]


text: Mayo Clinic

text: live

text: Generic

text: Biopsy

text: missing

text: Benign Breast Disease

text: missing

text: Homo sapiens

text: Breast

text: Breast

text: Benign Breast Disease Biopsy FFPE [sample67_FFPE_Exome]


text: Mayo Clinic

text: live

text: Generic

text: Biopsy

text: missing

text: Benign Breast Disease

text: missing

text: Homo sapiens

text: Breast

text: Breast

text: Benign Breast Disease Biopsy FFPE [sample67_FFPE_Depletion]