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characteristic: Data source type

text: 2020-01-23, version 1.0

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text: Netherlands

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characteristic: Alternative id

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characteristic: Data source ID

text: Template

characteristic: Data source type

text: 2020-01-23, version 1.0

characteristic: Data source version

text: Netherlands

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characteristic: Gene bank country

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text: submitter

text: mailto:sipkejoost.hiemstra@wur.nl

text: Sipke Joost

text: sjh

text: Hiemstra

text: submitter

text: Meuse-Rhine-Yssel

characteristic: Supplied breed

text: organism

text: Bos taurus

text: IMAGE

text: male

text: Bos taurus

text: CGN Genebank Cattle

characteristic: submission title

characteristic: title


text: missing geographic information

text: Template

text: 2020-01-23, version 1.0

text: Netherlands

text: Netherlands

text: CGN

text: Dutch Belted

text: Netherlands

characteristic: Organization country

characteristic: Organization name

text: submitter

characteristic: Organization role

characteristic: Person affiliation

text: mailto:sipkejoost.hiemstra@wur.nl

characteristic: Person email

text: Sipke Joost

characteristic: Person first name

text: sjh

characteristic: Person initial

text: Hiemstra

characteristic: Person last name

text: submitter

characteristic: Person role

characteristic: SRA accession

text: Dutch Belted

text: organism

characteristic: material

text: Bos taurus

characteristic: organism

text: IMAGE

characteristic: project

text: male

characteristic: sex

text: Bos taurus

text: CGN Genebank Cattle


characteristic: Alternative id

characteristic: Birth date

text: missing geographic information

characteristic: Birth location accuracy

characteristic: Data source ID

text: Template

characteristic: Data source type

text: 2020-01-23, version 1.0

characteristic: Data source version

text: Netherlands

characteristic: EFABIS Breed country

text: Netherlands

characteristic: Gene bank country

text: CGN

characteristic: Gene bank name

characteristic: IMAGE submission id

text: Swedish Red-and-White

characteristic: Mapped breed

text: Netherlands

text: submitter

text: mailto:sipkejoost.hiemstra@wur.nl

text: Sipke Joost

text: sjh

text: Hiemstra

text: submitter

text: Improved Red and White

characteristic: Supplied breed

text: organism

text: Bos taurus

text: IMAGE

text: male

text: Bos taurus

characteristic: species

characteristic: submission description

text: CGN Genebank Cattle


characteristic: SRA accession

characteristic: animal age at collection

characteristic: derived from

text: adult

characteristic: developmental stage

text: fed

characteristic: fasted status

text: normal

characteristic: health status at collection

text: specimen from organism

characteristic: material

text: Ovis aries

characteristic: organism

text: nasal mucus

characteristic: organism part

text: Easter Bush Campus, Edinburgh, Midlothian, EH25 9RG

characteristic: organization address

text: The Roslin Institute and Royal Dick School of Veterinary Studies

characteristic: organization name

text: institution

characteristic: organization role

characteristic: organization uri

text: shernae.woolley@roslin.ed.ac.uk

characteristic: person email

text: Shernae

characteristic: person first name

text: A

characteristic: person initials

text: Woolley

characteristic: person last name

text: submitter

characteristic: person role

text: FAANG

text: Nasal swab sample from adult female, 5 years of age, Scottish blackface

characteristic: sample description

characteristic: sample name

characteristic: specimen collection date

characteristic: specimen collection protocol

text: Nasal swab samples from Texel and Scottish Blackface sheep for DNA extraction and whole genome sequencing

characteristic: submission title

characteristic: title


characteristic: SRA accession

characteristic: animal age at collection

characteristic: derived from

text: adult

characteristic: developmental stage

text: fed

characteristic: fasted status

text: normal

characteristic: health status at collection

text: specimen from organism

characteristic: material

text: Ovis aries

characteristic: organism

text: nasal mucus

text: institution

text: shernae.woolley@roslin.ed.ac.uk

text: Shernae

text: A

text: Woolley

text: submitter

text: FAANG

characteristic: project

text: Nasal swab sample from adult male, 3 years of age, Texel

characteristic: submission description


text: adult

text: fed

text: normal

text: specimen from organism

text: Ovis aries

text: nasal mucus

characteristic: organism part

characteristic: organization address

characteristic: organization name

text: institution

characteristic: organization role

characteristic: organization uri

text: shernae.woolley@roslin.ed.ac.uk

characteristic: person email

text: Shernae

characteristic: person first name

text: A

characteristic: person initials

text: Woolley

characteristic: person last name

text: submitter

characteristic: person role

text: FAANG

text: Nasal swab sample from adult male, 2 years of age, Texel


characteristic: SRA accession

characteristic: animal age at collection

characteristic: derived from

text: adult

characteristic: developmental stage

text: fed

text: normal

text: specimen from organism

text: Ovis aries

text: nasal mucus

text: institution

text: shernae.woolley@roslin.ed.ac.uk

text: Shernae

text: A

text: Woolley

text: submitter

text: FAANG

text: Nasal swab sample from adult female, 5 years of age, Scottish Blackface

characteristic: sample description

characteristic: sample name

characteristic: specimen collection date

characteristic: specimen collection protocol

characteristic: submission title

characteristic: title


domain: self.bovreg 6

text: TRUE

characteristic: BovReg private submission

unit: day

text: mailto:BovReg-coordination@fbn-dummerstorf.de

characteristic: availability

text: neonate

text: normal

characteristic: health status at collection

text: specimen from organism

characteristic: material

text: Bos taurus

characteristic: organism

text: adrenal gland cortex zone

characteristic: organism part

text: FAANG

characteristic: project

text: Adrenal-gland-cortex, BE063773398

text: BovReg

characteristic: secondary project

unit: YYYY-MM

text: BovReg samples - 6 animals with different assays

characteristic: submission description

text: BovReg samples

GIGA/ULIEGE

Role: experiment performer

Address: GIGA, Avenue de l'Hôpital 11, 4000 Liège, Belgium

Gabriel Moreira

FirstName: Gabriel

LastName: Moreira

Role: submitter


text: TRUE

characteristic: SRA accession

characteristic: animal age at collection

characteristic: derived from

text: neonate

text: normal

text: specimen from organism

text: Bos taurus

text: Cerebellum

text: FAANG

text: Cerebellum, BE063773398

text: BovReg

text: BovReg samples


text: TRUE

text: neonate

characteristic: developmental stage

text: normal

text: specimen from organism

text: Bos taurus

text: cerebral cortex

text: FAANG

text: Cerebrum-cortex, BE063773398

characteristic: sample description

characteristic: sample name

text: BovReg

text: BovReg samples


text: TRUE

text: neonate

text: normal

text: specimen from organism

text: Bos taurus

text: Colon

text: FAANG

text: Colon, BE063773398

text: BovReg

characteristic: specimen collection date

characteristic: specimen collection protocol

text: BovReg samples

characteristic: submission title


text: TRUE

characteristic: BovReg private submission

characteristic: availability

text: neonate

text: normal

text: specimen from organism

text: Bos taurus

text: Duodenum

text: FAANG

text: Duodenum, BE063773398

text: BovReg

text: BovReg samples


text: TRUE

text: neonate

text: normal

characteristic: health status at collection

text: specimen from organism

characteristic: material

text: Bos taurus

text: Heart

text: FAANG

text: Heart, BE063773398

text: BovReg

text: BovReg samples


text: TRUE

text: neonate

text: normal

text: specimen from organism

text: Bos taurus

characteristic: organism

text: Hypothalamus

characteristic: organism part

text: FAANG

text: Hypothalamus, BE063773398

text: BovReg

text: BovReg samples


text: TRUE

text: neonate

text: normal

text: specimen from organism

text: Bos taurus

text: Ileum

text: FAANG

characteristic: project

text: Ileum, BE063773398

text: BovReg

characteristic: secondary project

text: BovReg samples


text: TRUE

characteristic: SRA accession

text: neonate

text: normal

text: specimen from organism

text: Bos taurus

text: jejunum

text: FAANG

text: Jejunum, BE063773398

text: BovReg

characteristic: submission description

text: BovReg samples


text: TRUE

characteristic: animal age at collection

characteristic: derived from

text: neonate

text: normal

text: specimen from organism

text: Bos taurus

text: Kidney

text: FAANG

text: Kidney, BE063773398

text: BovReg

text: BovReg samples


text: TRUE

text: neonate

characteristic: developmental stage

text: normal

text: specimen from organism

text: Bos taurus

text: Liver

text: FAANG

text: Liver, BE063773398

characteristic: sample description

text: BovReg

text: BovReg samples


text: TRUE

text: neonate

text: normal

text: specimen from organism

text: Bos taurus

text: Lung

text: FAANG

text: Lung, BE063773398

characteristic: sample name

text: BovReg

characteristic: specimen collection date

text: BovReg samples


text: TRUE

text: neonate

text: normal

text: specimen from organism

text: Bos taurus

text: lymph node

text: FAANG

text: Lymph-node, BE063773398

text: BovReg

characteristic: specimen collection protocol

text: BovReg samples

characteristic: submission title


text: TRUE

characteristic: BovReg private submission

characteristic: availability

text: neonate

text: normal

text: specimen from organism

text: Bos taurus

text: Pancreas

text: FAANG

text: Pancreas, BE063773398

text: BovReg

text: BovReg samples


text: TRUE

text: neonate

text: normal

characteristic: health status at collection

text: specimen from organism

characteristic: material

text: Bos taurus

text: Rumen

text: FAANG

text: Rumen, BE063773398

text: BovReg

text: BovReg samples


text: TRUE

text: neonate

text: normal

text: specimen from organism

text: Bos taurus

characteristic: organism

text: longissimus muscle

characteristic: organism part

text: FAANG

text: Skeletal-muscle, BE063773398

text: BovReg

text: BovReg samples


text: TRUE

text: neonate

text: normal

text: specimen from organism

text: Bos taurus

text: Spleen

text: FAANG

characteristic: project

text: Spleen, BE063773398

text: BovReg

characteristic: secondary project

text: BovReg samples


text: TRUE

characteristic: SRA accession

text: neonate

text: normal

text: specimen from organism

text: Bos taurus

text: subcutaneous adipose tissue

text: FAANG

text: Subcutaneous-fat, BE063773398

text: BovReg

characteristic: submission description

text: BovReg samples


text: TRUE

characteristic: animal age at collection

characteristic: derived from

text: neonate

text: normal

text: specimen from organism

text: Bos taurus

text: Testis

text: FAANG

text: Testis, BE063773398

text: BovReg

text: BovReg samples


text: TRUE

text: neonate

characteristic: developmental stage

text: normal

text: specimen from organism

text: Bos taurus

text: thyroid gland

text: FAANG

text: Thyroid-gland, BE063773398

characteristic: sample description

text: BovReg

text: BovReg samples


text: TRUE

text: neonate

text: normal

text: specimen from organism

text: Bos taurus

text: adrenal gland cortex zone

text: FAANG

text: Adrenal-gland, BE714385429

characteristic: sample name

text: BovReg

characteristic: specimen collection date

text: BovReg samples


text: TRUE

text: neonate

text: normal

text: specimen from organism

text: Bos taurus

text: Cerebellum

text: FAANG

text: Cerebellum, BE714385429

text: BovReg

characteristic: specimen collection protocol

text: BovReg samples

characteristic: submission title


text: TRUE

characteristic: BovReg private submission

characteristic: availability

text: neonate

text: normal

text: specimen from organism

text: Bos taurus

text: cerebral cortex

text: FAANG

text: Cerebrum-cortex, BE714385429

text: BovReg

text: BovReg samples


text: TRUE

text: neonate

text: normal

characteristic: health status at collection

text: specimen from organism

characteristic: material

text: Bos taurus

text: Colon

text: FAANG

text: Colon, BE714385429

text: BovReg

text: BovReg samples


text: TRUE

text: neonate

text: normal

text: specimen from organism

text: Bos taurus

characteristic: organism

text: Duodenum

characteristic: organism part

text: FAANG

text: Duodenum, BE714385429

text: BovReg

text: BovReg samples


text: TRUE

text: neonate

text: normal

text: specimen from organism

text: Bos taurus

text: Heart

text: FAANG

characteristic: project

text: Heart, BE714385429

text: BovReg

characteristic: secondary project

text: BovReg samples


text: TRUE

characteristic: SRA accession

text: neonate

text: normal

text: specimen from organism

text: Bos taurus

text: Hypothalamus

text: FAANG

text: Hypothalamus, BE714385429

text: BovReg

characteristic: submission description

text: BovReg samples


text: TRUE

characteristic: animal age at collection

characteristic: derived from

text: neonate

text: normal

text: specimen from organism

text: Bos taurus

text: Ileum

text: FAANG

text: Ileum, BE714385429

text: BovReg

text: BovReg samples


text: TRUE

text: neonate

characteristic: developmental stage

text: normal

text: specimen from organism

text: Bos taurus

text: jejunum

text: FAANG

text: Jujenum, BE714385429

characteristic: sample description

text: BovReg

text: BovReg samples


text: TRUE

text: neonate

text: normal

text: specimen from organism

text: Bos taurus

text: Kidney

text: FAANG

text: Kidney, BE714385429

characteristic: sample name

text: BovReg

characteristic: specimen collection date

text: BovReg samples


text: TRUE

text: neonate

text: normal

text: specimen from organism

text: Bos taurus

text: Liver

text: FAANG

text: Liver, BE714385429

text: BovReg

characteristic: specimen collection protocol

text: BovReg samples

characteristic: submission title


text: TRUE

characteristic: BovReg private submission

characteristic: availability

text: neonate

text: normal

text: specimen from organism

text: Bos taurus

text: Lung

text: FAANG

text: Lung, BE714385429

text: BovReg

text: BovReg samples


text: TRUE

text: neonate

text: normal

characteristic: health status at collection

text: specimen from organism

characteristic: material

text: Bos taurus

text: lymph node

text: FAANG

text: Lymph-node, BE714385429

text: BovReg

text: BovReg samples


text: TRUE

text: neonate

text: normal

text: specimen from organism

text: Bos taurus

characteristic: organism

text: mammary gland

characteristic: organism part

text: FAANG

text: Mammary-gland, BE714385429

text: BovReg

text: BovReg samples


text: TRUE

text: neonate

text: normal

text: specimen from organism

text: Bos taurus

text: Ovary

text: FAANG

characteristic: project

text: Ovary, BE714385429

text: BovReg

characteristic: secondary project

text: BovReg samples


text: TRUE

characteristic: SRA accession

text: neonate

text: normal

text: specimen from organism

text: Bos taurus

text: Pancreas

text: FAANG

text: Pancreas, BE714385429

text: BovReg

characteristic: submission description

text: BovReg samples


text: TRUE

characteristic: animal age at collection

characteristic: derived from

text: neonate

text: normal

text: specimen from organism

text: Bos taurus

text: pituitary gland

text: FAANG

text: Pituitary-gland, BE714385429

text: BovReg

text: BovReg samples


text: TRUE

text: neonate

characteristic: developmental stage

text: normal

text: specimen from organism

text: Bos taurus

text: Rumen

text: FAANG

text: Rumen, BE714385429

characteristic: sample description

text: BovReg

text: BovReg samples


text: TRUE

text: neonate

text: normal

text: specimen from organism

text: Bos taurus

text: longissimus muscle

text: FAANG

text: Skeletal-muscle, BE714385429

characteristic: sample name

text: BovReg

characteristic: specimen collection date

text: BovReg samples


text: TRUE

text: neonate

text: normal

text: specimen from organism

text: Bos taurus

text: Spleen

text: FAANG

text: Spleen, BE714385429

text: BovReg

characteristic: specimen collection protocol

text: BovReg samples

characteristic: submission title


text: TRUE

characteristic: BovReg private submission

characteristic: availability

text: neonate

text: normal

text: specimen from organism

text: Bos taurus

text: subcutaneous adipose tissue

text: FAANG

text: Subcutaneous-fat, BE714385429

text: BovReg

text: BovReg samples


text: TRUE

text: neonate

text: normal

characteristic: health status at collection

text: specimen from organism

characteristic: material

text: Bos taurus

text: thyroid gland

text: FAANG

text: Thyroid-gland, BE714385429

text: BovReg

text: BovReg samples


text: TRUE

text: neonate

text: normal

text: specimen from organism

text: Bos taurus

characteristic: organism

text: Uterus

characteristic: organism part

text: FAANG

text: Uterus, BE714385429

text: BovReg

text: BovReg samples


text: TRUE

text: juvenile stage

text: normal

text: specimen from organism

text: Bos taurus

text: adrenal gland cortex zone

text: FAANG

characteristic: project

text: Adrenal-gland, CA-154

text: BovReg

characteristic: secondary project

text: BovReg samples


text: TRUE

characteristic: SRA accession

text: juvenile stage

text: normal

text: specimen from organism

text: Bos taurus

text: Cerebellum

text: FAANG

text: Cerebellum, CA-154

text: BovReg

characteristic: submission description

text: BovReg samples


text: TRUE

characteristic: animal age at collection

characteristic: derived from

text: juvenile stage

text: normal

text: specimen from organism

text: Bos taurus

text: Colon

text: FAANG

text: Colon, CA-154

text: BovReg

text: BovReg samples


text: TRUE

text: juvenile stage

characteristic: developmental stage

text: normal

text: specimen from organism

text: Bos taurus

text: Duodenum

text: FAANG

text: Duodenum, CA-154

characteristic: sample description

text: BovReg

text: BovReg samples


text: TRUE

text: juvenile stage

text: normal

text: specimen from organism

text: Bos taurus

text: Heart

text: FAANG

text: Heart, CA-154

characteristic: sample name

text: BovReg

characteristic: specimen collection date

text: BovReg samples


text: TRUE

text: juvenile stage

text: normal

text: specimen from organism

text: Bos taurus

text: Ileum

text: FAANG

text: Ileum, CA-154

text: BovReg

characteristic: specimen collection protocol

text: BovReg samples

characteristic: submission title


text: TRUE

characteristic: BovReg private submission

characteristic: availability

text: juvenile stage

text: normal

text: specimen from organism

text: Bos taurus

text: jejunum

text: FAANG

text: Jejunum, CA-154

text: BovReg

text: BovReg samples


text: TRUE

text: juvenile stage

text: normal

characteristic: health status at collection

text: specimen from organism

characteristic: material

text: Bos taurus

text: Kidney

text: FAANG

text: Kidney, CA-154

text: BovReg

text: BovReg samples


text: TRUE

text: juvenile stage

text: normal

text: specimen from organism

text: Bos taurus

characteristic: organism

text: Liver

characteristic: organism part

text: FAANG

text: Liver, CA-154

text: BovReg

text: BovReg samples


text: TRUE

text: juvenile stage

text: normal

text: specimen from organism

text: Bos taurus

text: Lung

text: FAANG

characteristic: project

text: Lung, CA-154

text: BovReg

characteristic: secondary project

text: BovReg samples


text: TRUE

characteristic: SRA accession

text: juvenile stage

text: normal

text: specimen from organism

text: Bos taurus

text: lymph node

text: FAANG

text: TB-Lymph, CA-154

text: BovReg

characteristic: submission description

text: BovReg samples


text: TRUE

characteristic: animal age at collection

characteristic: derived from

text: juvenile stage

text: normal

text: specimen from organism

text: Bos taurus

text: mammary gland

text: FAANG

text: Mammary-gland, CA-154

text: BovReg

text: BovReg samples


text: TRUE

text: juvenile stage

characteristic: developmental stage

text: normal

text: specimen from organism

text: Bos taurus

text: Ovary

text: FAANG

text: Ovary, CA-154

characteristic: sample description

text: BovReg

text: BovReg samples


text: TRUE

text: juvenile stage

text: normal

text: specimen from organism

text: Bos taurus

text: Pancreas

text: FAANG

text: Pancreas, CA-154

characteristic: sample name

text: BovReg

characteristic: specimen collection date

text: BovReg samples


text: TRUE

text: juvenile stage

text: normal

text: specimen from organism

text: Bos taurus

text: pituitary gland

text: FAANG

text: Pituitary, CA-154

text: BovReg

characteristic: specimen collection protocol

text: BovReg samples

characteristic: submission title


text: TRUE

characteristic: BovReg private submission

characteristic: availability

text: juvenile stage

text: normal

text: specimen from organism

text: Bos taurus

text: Rumen

text: FAANG

text: Rumen, CA-154

text: BovReg

text: BovReg samples


text: TRUE

text: juvenile stage

text: normal

characteristic: health status at collection

text: specimen from organism

characteristic: material

text: Bos taurus

text: Spleen

text: FAANG

text: Spleen, CA-154

text: BovReg

text: BovReg samples


text: TRUE

text: juvenile stage

text: normal

text: specimen from organism

text: Bos taurus

characteristic: organism

text: uterine horn

characteristic: organism part

text: FAANG

text: Uterine-horn, CA-154

text: BovReg

text: BovReg samples


text: TRUE

text: juvenile stage

text: normal

text: specimen from organism

text: Bos taurus

text: adrenal gland cortex zone

text: FAANG

characteristic: project

text: Adrenal-gland, CA-335

text: BovReg

characteristic: secondary project

text: BovReg samples


text: TRUE

characteristic: SRA accession

text: juvenile stage

text: normal

text: specimen from organism

text: Bos taurus

text: cerebral cortex

text: FAANG

text: Cortex, CA-335

text: BovReg

characteristic: submission description

text: BovReg samples


text: TRUE

characteristic: animal age at collection

characteristic: derived from

text: juvenile stage

text: normal

text: specimen from organism

text: Bos taurus

text: Colon

text: FAANG

text: Colon, CA-335

text: BovReg

text: BovReg samples


text: TRUE

text: juvenile stage

characteristic: developmental stage

text: normal

text: specimen from organism

text: Bos taurus

text: Duodenum

text: FAANG

text: Duodenum, CA-335

characteristic: sample description

text: BovReg

text: BovReg samples


text: TRUE

text: juvenile stage

text: normal

text: specimen from organism

text: Bos taurus

text: Heart

text: FAANG

text: Heart, CA-335

characteristic: sample name

text: BovReg

characteristic: specimen collection date

text: BovReg samples


text: TRUE

text: juvenile stage

text: normal

text: specimen from organism

text: Bos taurus

text: Ileum

text: FAANG

text: Ileum, CA-335

text: BovReg

characteristic: specimen collection protocol

text: BovReg samples

characteristic: submission title


text: TRUE

characteristic: BovReg private submission

characteristic: availability

text: juvenile stage

text: normal

text: specimen from organism

text: Bos taurus

text: jejunum

text: FAANG

text: Jejunum, CA-335

text: BovReg

text: BovReg samples


text: TRUE

text: juvenile stage

text: normal

characteristic: health status at collection

text: specimen from organism

characteristic: material

text: Bos taurus

text: Kidney

text: FAANG

text: Kidney, CA-335

text: BovReg

text: BovReg samples


text: TRUE

text: juvenile stage

text: normal

text: specimen from organism

text: Bos taurus

characteristic: organism

text: Liver

characteristic: organism part

text: FAANG

text: Liver, CA-335

text: BovReg

text: BovReg samples


text: TRUE

text: juvenile stage

text: normal

text: specimen from organism

text: Bos taurus

text: Lung

text: FAANG

characteristic: project

text: Lung, CA-335

text: BovReg

characteristic: secondary project

text: BovReg samples


text: TRUE

characteristic: SRA accession

text: juvenile stage

text: normal

text: specimen from organism

text: Bos taurus

text: lymph node

text: FAANG

text: TB-Lymph, CA-335

text: BovReg

characteristic: submission description

text: BovReg samples


text: TRUE

characteristic: animal age at collection

characteristic: derived from

text: juvenile stage

text: normal

text: specimen from organism

text: Bos taurus

text: Pancreas

text: FAANG

text: Pancreas, CA-335

text: BovReg

text: BovReg samples


text: TRUE

text: juvenile stage

characteristic: developmental stage

text: normal

text: specimen from organism

text: Bos taurus

text: pituitary gland

text: FAANG

text: Pituitary-gland, CA-335

characteristic: sample description

text: BovReg

text: BovReg samples


text: TRUE

text: juvenile stage

text: normal

text: specimen from organism

text: Bos taurus

text: Rumen

text: FAANG

text: Rumen, CA-335

characteristic: sample name

text: BovReg

characteristic: specimen collection date

text: BovReg samples


text: TRUE

text: juvenile stage

text: normal

text: specimen from organism

text: Bos taurus

text: Spleen

text: FAANG

text: Spleen, CA-335

text: BovReg

characteristic: specimen collection protocol

text: BovReg samples

characteristic: submission title


text: TRUE

characteristic: BovReg private submission

characteristic: availability

text: DE-F

text: adult

text: normal

text: specimen from organism

text: Bos taurus

text: adrenal gland cortex zone

text: FAANG

text: Adrenal-gland, DE-F

text: BovReg

text: BovReg samples


text: TRUE

text: DE-F

text: adult

text: normal

characteristic: health status at collection

text: specimen from organism

characteristic: material

text: Bos taurus

text: cerebral cortex

text: FAANG

text: Cerebrum-cortex, DE-F

text: BovReg

text: BovReg samples


text: TRUE

text: DE-F

text: adult

text: normal

text: specimen from organism

text: Bos taurus

characteristic: organism

text: Colon

characteristic: organism part

text: FAANG

text: Colon, DE-F

text: BovReg

text: BovReg samples


text: TRUE

text: DE-F

text: adult

text: normal

text: specimen from organism

text: Bos taurus

text: Duodenum

text: FAANG

characteristic: project

text: Duodenum, DE-F

text: BovReg

characteristic: secondary project

text: BovReg samples


text: TRUE

characteristic: SRA accession

text: DE-F

text: adult

text: normal

text: specimen from organism

text: Bos taurus

text: Ileum

text: FAANG

text: Ileum, DE-F

text: BovReg

characteristic: submission description

text: BovReg samples


text: TRUE

characteristic: animal age at collection

text: DE-F

characteristic: derived from

text: adult

text: normal

text: specimen from organism

text: Bos taurus

text: jejunum

text: FAANG

text: Jejunum, DE-F

text: BovReg

text: BovReg samples


text: TRUE

text: DE-F

text: adult

characteristic: developmental stage

text: normal

text: specimen from organism

text: Bos taurus

text: Kidney

text: FAANG

text: Kidney, DE-F

characteristic: sample description

text: BovReg

text: BovReg samples


text: TRUE

text: DE-F

text: adult

text: normal

text: specimen from organism

text: Bos taurus

text: Liver

text: FAANG

text: Liver, DE-F

characteristic: sample name

text: BovReg

characteristic: specimen collection date

text: BovReg samples


text: TRUE

text: DE-F

text: adult

text: normal

text: specimen from organism

text: Bos taurus

text: Lung

text: FAANG

text: Lung, DE-F

text: BovReg

characteristic: specimen collection protocol

text: BovReg samples

characteristic: submission title


text: TRUE

characteristic: BovReg private submission

characteristic: availability

text: DE-F

text: adult

text: normal

text: specimen from organism

text: Bos taurus

text: lymph node

text: FAANG

text: Lymph-node, DE-F

text: BovReg

text: BovReg samples


text: TRUE

text: DE-F

text: adult

text: normal

characteristic: health status at collection

text: specimen from organism

characteristic: material

text: Bos taurus

text: mammary gland

text: FAANG

text: Mammary-gland, DE-F

text: BovReg

text: BovReg samples


text: TRUE

text: DE-F

text: adult

text: normal

text: specimen from organism

text: Bos taurus

characteristic: organism

text: Pancreas

characteristic: organism part

text: FAANG

text: Pancreas, DE-F

text: BovReg

text: BovReg samples


text: TRUE

text: DE-F

text: adult

text: normal

text: specimen from organism

text: Bos taurus

text: Rumen

text: FAANG

characteristic: project

text: Rumen, DE-F

text: BovReg

characteristic: secondary project

text: BovReg samples


text: TRUE

characteristic: SRA accession

text: DE-F

text: adult

text: normal

text: specimen from organism

text: Bos taurus

text: Spleen

text: FAANG

text: Spleen, DE-F

text: BovReg

characteristic: submission description

text: BovReg samples


text: TRUE

characteristic: animal age at collection

text: DE-F

characteristic: derived from

text: adult

text: normal

text: specimen from organism

text: Bos taurus

text: thyroid gland

text: FAANG

text: Thyroid-gland, DE-F

text: BovReg

text: BovReg samples


text: TRUE

text: DE-F

text: adult

characteristic: developmental stage

text: normal

text: specimen from organism

text: Bos taurus

text: Uterus

text: FAANG

text: Uterus, DE-F

characteristic: sample description

text: BovReg

text: BovReg samples


text: TRUE

text: DE-M

text: adult

text: normal

text: specimen from organism

text: Bos taurus

text: adrenal gland cortex zone

text: FAANG

text: Adrenal-gland, DE-M

characteristic: sample name

text: BovReg

characteristic: specimen collection date

text: BovReg samples


text: TRUE

text: DE-M

text: adult

text: normal

text: specimen from organism

text: Bos taurus

text: Cerebellum

text: FAANG

text: Cerebellum, DE-M

text: BovReg

characteristic: specimen collection protocol

text: BovReg samples

characteristic: submission title


text: TRUE

characteristic: BovReg private submission

characteristic: availability

text: DE-M

text: adult

text: normal

text: specimen from organism

text: Bos taurus

text: cerebral cortex

text: FAANG

text: Cerebrum-cortex, DE-M

text: BovReg

text: BovReg samples


text: TRUE

text: DE-M

text: adult

text: normal

characteristic: health status at collection

text: specimen from organism

characteristic: material

text: Bos taurus

text: Colon

text: FAANG

text: Colon, DE-M

text: BovReg

text: BovReg samples


text: TRUE

text: DE-M

text: adult

text: normal

text: specimen from organism

text: Bos taurus

characteristic: organism

text: Duodenum

characteristic: organism part

text: FAANG

text: Duodenum, DE-M

text: BovReg

text: BovReg samples


text: TRUE

text: DE-M

text: adult

text: normal

text: specimen from organism

text: Bos taurus

text: Heart

text: FAANG

characteristic: project

text: Heart, DE-M

text: BovReg

characteristic: secondary project

text: BovReg samples


text: TRUE

characteristic: SRA accession

text: DE-M

text: adult

text: normal

text: specimen from organism

text: Bos taurus

text: Ileum

text: FAANG

text: Ileum, DE-M

text: BovReg

characteristic: submission description

text: BovReg samples


text: TRUE

characteristic: animal age at collection

text: DE-M

characteristic: derived from

text: adult

text: normal

text: specimen from organism

text: Bos taurus

text: jejunum

text: FAANG

text: Jejunum, DE-M

text: BovReg

text: BovReg samples


text: TRUE

text: DE-M

text: adult

characteristic: developmental stage

text: normal

text: specimen from organism

text: Bos taurus

text: Kidney

text: FAANG

text: Kidney, DE-M

characteristic: sample description

text: BovReg

text: BovReg samples


text: TRUE

text: DE-M

text: adult

text: normal

text: specimen from organism

text: Bos taurus

text: Liver

text: FAANG

text: Liver, DE-M

characteristic: sample name

text: BovReg

characteristic: specimen collection date

text: BovReg samples


text: TRUE

text: DE-M

text: adult

text: normal

text: specimen from organism

text: Bos taurus

text: Lung

text: FAANG

text: Lung, DE-M

text: BovReg

characteristic: specimen collection protocol

text: BovReg samples

characteristic: submission title


text: TRUE

characteristic: BovReg private submission

characteristic: availability

text: DE-M

text: adult

text: normal

text: specimen from organism

text: Bos taurus

text: lymph node

text: FAANG

text: Lymph-node, DE-M

text: BovReg

text: BovReg samples


text: TRUE

text: DE-M

text: adult

text: normal

characteristic: health status at collection

text: specimen from organism

characteristic: material

text: Bos taurus

text: Pancreas

text: FAANG

text: Pancreas, DE-M

text: BovReg

text: BovReg samples


text: TRUE

text: DE-M

text: adult

text: normal

text: specimen from organism

text: Bos taurus

characteristic: organism

text: Rumen

characteristic: organism part

text: FAANG

text: Rumen, DE-M

text: BovReg

text: BovReg samples


text: TRUE

text: DE-M

text: adult

text: normal

text: specimen from organism

text: Bos taurus

text: Spleen

text: FAANG

characteristic: project

text: Spleen, DE-M

text: BovReg

characteristic: secondary project

text: BovReg samples


text: TRUE

characteristic: SRA accession

text: DE-M

text: adult

text: normal

text: specimen from organism

text: Bos taurus

text: Testis

text: FAANG

text: Testis, DE-M

text: BovReg

characteristic: submission description

text: BovReg samples


text: TRUE

characteristic: animal age at collection

text: DE-M

characteristic: derived from

text: adult

text: normal

text: specimen from organism

text: Bos taurus

text: thyroid gland

text: FAANG

text: Thyroid-gland, DE-M

text: BovReg

text: BovReg samples


unit: hour

unit: parts per thousand

characteristic: average water salinity

unit: Thermal time

characteristic: degree days

text: blastula stage

characteristic: developmental stage

text: fed

characteristic: fasted status

unit: generations from wild

characteristic: generations from wild

text: Water

characteristic: growth media

text: pre

characteristic: hatching

text: normal

text: specimen from organism

characteristic: medium replacement frequency

text: Scophthalmus maximus

text: embryo

text: Domesticated diploid

characteristic: origin

characteristic: percentage total somite number

characteristic: photoperiod

unit: Celsius

characteristic: post-hatching water temperature average

characteristic: pre-hatching water temperature average

text: FAANG

text: gonochoric

characteristic: reproductive strategy

text: Late Blastula, embryonic material; CHIPseq material

characteristic: sample description

text: AQUA-FAANG

text: AQUA-FAANG metadata for turbot (Scophthalmus maximus) samples: WP1 (BodyMaps and DevMaps) & WP3 (ImmunoMaps)

characteristic: time post fertilisation

Stolt Sea Farm

Role: biomaterial provider

Address: C/Letonia nº2, 15707 Santiago de Compostela, Spain

USC

Address: Av. Carvallo Calero, s/n, Veterinary faculty, pavilion 4, 27002 Lugo, Spain

Role: consortium member

Role: data analyst

Role: institution

Role: investigator

Belén Gómez Pardo

FirstName: Belén

LastName: Gómez Pardo

Paulino Martínez Portela

FirstName: Paulino

LastName: Martínez Portela

Óscar Aramburu González

FirstName: Óscar

LastName: Aramburu González


characteristic: SRA accession

characteristic: animal age at collection

characteristic: derived from

text: gastrula stage

text: fed

text: Water

text: pre

text: normal

characteristic: health status at collection

text: specimen from organism

characteristic: material

text: Scophthalmus maximus

characteristic: organism

text: embryo

characteristic: organism part

text: Domesticated diploid

text: FAANG

characteristic: project

text: gonochoric

text: Gastrula (embryonic shield), embryonic material; CHIPseq material

characteristic: sample name

text: AQUA-FAANG

characteristic: secondary project

characteristic: specimen collection date

characteristic: specimen collection protocol

characteristic: submission description

characteristic: submission title


characteristic: average water salinity

characteristic: degree days

text: late embryonic stage

characteristic: developmental stage

text: fed

characteristic: fasted status

characteristic: generations from wild

text: Water

characteristic: growth media

text: pre

characteristic: hatching

text: normal

text: specimen from organism

characteristic: medium replacement frequency

text: Scophthalmus maximus

text: embryo

text: Domesticated diploid

characteristic: origin

characteristic: percentage total somite number

characteristic: photoperiod

characteristic: post-hatching water temperature average

characteristic: pre-hatching water temperature average

text: FAANG

text: gonochoric

characteristic: reproductive strategy

text: Early segmentation, embryonic material; CHIPseq material

text: AQUA-FAANG


characteristic: SRA accession

characteristic: animal age at collection

characteristic: derived from

text: late embryonic stage

text: fed

text: Water

text: pre

text: normal

characteristic: health status at collection

text: specimen from organism

characteristic: material

text: Scophthalmus maximus

characteristic: organism

text: embryo

characteristic: organism part

text: Domesticated diploid

text: FAANG

characteristic: project

text: gonochoric

text: Mid segmentation, embryonic material; CHIPseq material

characteristic: sample description

characteristic: sample name

text: AQUA-FAANG

characteristic: secondary project

characteristic: specimen collection date

characteristic: specimen collection protocol

characteristic: time post fertilisation


characteristic: average water salinity

characteristic: degree days

text: late embryonic stage

characteristic: developmental stage

text: fed

characteristic: fasted status

characteristic: generations from wild

text: Water

characteristic: growth media

text: pre

characteristic: hatching

text: normal

text: specimen from organism

characteristic: medium replacement frequency

text: Scophthalmus maximus

text: embryo

text: Domesticated diploid

characteristic: origin

characteristic: percentage total somite number

characteristic: photoperiod

characteristic: post-hatching water temperature average

text: FAANG

text: gonochoric

text: Late segmentation, embryonic material; CHIPseq material

text: AQUA-FAANG

characteristic: submission description

characteristic: submission title


characteristic: SRA accession

characteristic: animal age at collection

characteristic: derived from

text: pharyngula stage

text: fed

text: Water

text: pre

text: normal

characteristic: health status at collection

text: specimen from organism

characteristic: material

text: Scophthalmus maximus

characteristic: organism

text: embryo

characteristic: organism part

text: Domesticated diploid

characteristic: pre-hatching water temperature average

text: FAANG

characteristic: project

text: gonochoric

characteristic: reproductive strategy

text: Prehatching stage, embryonic material; CHIPseq material

characteristic: sample description

characteristic: sample name

text: AQUA-FAANG

characteristic: secondary project

characteristic: specimen collection date


text: Tricaine methanesulfonate (MS-222)

characteristic: anaesthetic or sedative name

unit: month

unit: mg/L

characteristic: average water oxygen

characteristic: average water salinity

text: sexually immature stage

characteristic: developmental stage

text: Ration pellets according to mouth size

characteristic: diet

text: fasted

characteristic: fasted status

characteristic: food restriction

characteristic: generations from wild

text: testis

characteristic: gonad type

text: post

characteristic: hatching

text: normal

text: specimen from organism

text: immature

characteristic: maturity state

text: Lethal anaesthetic and exsanguination

characteristic: method of euthanasia

text: Scophthalmus maximus

text: gonad

text: Domesticated diploid

characteristic: origin

characteristic: photoperiod

characteristic: post-hatching animal density

characteristic: post-hatching water temperature average

text: FAANG

text: gonochoric

text: Scophthalmus maximus; Gonad; Immature male

characteristic: sampling day end time

characteristic: sampling day start time

unit: grams

characteristic: sampling weight

text: AQUA-FAANG

characteristic: specimen collection protocol

unit: centimeters

characteristic: standard length

characteristic: time post fertilisation

characteristic: total length


characteristic: SRA accession

text: Tricaine methanesulfonate (MS-222)

characteristic: anaesthetic or sedative name

characteristic: animal age at collection

characteristic: average water oxygen

characteristic: average water salinity

characteristic: derived from

text: sexually immature stage

characteristic: developmental stage

text: Ration pellets according to mouth size

characteristic: diet

text: fasted

characteristic: fasted status

characteristic: food restriction

text: ovary

text: post

text: normal

characteristic: health status at collection

text: specimen from organism

characteristic: material

text: immature

text: Lethal anaesthetic and exsanguination

text: Scophthalmus maximus

characteristic: organism

text: gonad

characteristic: organism part

text: Domesticated diploid

text: FAANG

characteristic: project

text: gonochoric

characteristic: reproductive strategy

text: Scophthalmus maximus; Gonad; Immature female

characteristic: sample description

characteristic: sample name

text: AQUA-FAANG

characteristic: secondary project

characteristic: specimen collection date

characteristic: submission description

characteristic: submission title


characteristic: SRA accession

text: Tricaine methanesulfonate (MS-222)

characteristic: anaesthetic or sedative name

characteristic: animal age at collection

characteristic: average water oxygen

characteristic: average water salinity

characteristic: derived from

text: sexually immature stage

text: Ration pellets according to mouth size

text: fasted

characteristic: generations from wild

text: ovary

characteristic: gonad type

text: post

characteristic: hatching

text: normal

text: specimen from organism

text: immature

characteristic: maturity state

text: Lethal anaesthetic and exsanguination

characteristic: method of euthanasia

text: Scophthalmus maximus

text: gonad

text: Domesticated diploid

characteristic: origin

characteristic: photoperiod

characteristic: post-hatching animal density

characteristic: post-hatching water temperature average

text: FAANG

text: gonochoric

characteristic: sampling day end time

characteristic: sampling day start time

characteristic: sampling weight

text: AQUA-FAANG

characteristic: specimen collection protocol

characteristic: standard length

characteristic: time post fertilisation

characteristic: total length


characteristic: SRA accession

text: Tricaine methanesulfonate (MS-222)

characteristic: anaesthetic or sedative name

characteristic: animal age at collection

characteristic: average water oxygen

characteristic: average water salinity

characteristic: derived from

text: sexually immature stage

characteristic: developmental stage

text: Ration pellets according to mouth size

characteristic: diet

text: fasted

characteristic: fasted status

characteristic: food restriction

text: testis

text: post

text: normal

characteristic: health status at collection

text: specimen from organism

characteristic: material

text: immature

text: Lethal anaesthetic and exsanguination

text: Scophthalmus maximus

characteristic: organism

text: gonad

characteristic: organism part

text: Domesticated diploid

text: FAANG

characteristic: project

text: gonochoric

characteristic: reproductive strategy

characteristic: sample description

characteristic: sample name

text: AQUA-FAANG

characteristic: secondary project

characteristic: specimen collection date

characteristic: submission description

characteristic: submission title


characteristic: SRA accession

text: Tricaine methanesulfonate (MS-222)

characteristic: anaesthetic or sedative name

characteristic: animal age at collection

characteristic: average water oxygen

characteristic: average water salinity

characteristic: derived from

text: sexually immature stage

text: Ration pellets according to mouth size

text: fasted

characteristic: generations from wild

text: ovary

characteristic: gonad type

text: post

characteristic: hatching

text: normal

text: specimen from organism

text: immature

characteristic: maturity state

text: Lethal anaesthetic and exsanguination

characteristic: method of euthanasia

text: Scophthalmus maximus

text: gonad

text: Domesticated diploid

characteristic: origin

characteristic: photoperiod

characteristic: post-hatching animal density

characteristic: post-hatching water temperature average

text: FAANG

text: gonochoric

characteristic: sampling day end time

characteristic: sampling day start time

characteristic: sampling weight

text: AQUA-FAANG

characteristic: specimen collection protocol

characteristic: standard length

characteristic: time post fertilisation

characteristic: total length


characteristic: SRA accession

text: Tricaine methanesulfonate (MS-222)

characteristic: anaesthetic or sedative name

characteristic: animal age at collection

characteristic: average water oxygen

characteristic: average water salinity

characteristic: derived from

text: post-juvenile adult stage

characteristic: developmental stage

text: Ration pellets according to mouth size

characteristic: diet

text: fasted

characteristic: fasted status

characteristic: food restriction

text: testis

text: post

text: normal

characteristic: health status at collection

text: specimen from organism

characteristic: material

text: mature

text: Lethal anaesthetic and exsanguination

text: Scophthalmus maximus

characteristic: organism

text: gonad

characteristic: organism part

text: Domesticated diploid

text: FAANG

characteristic: project

text: gonochoric

characteristic: reproductive strategy

text: Scophthalmus maximus; Gonad; Mature male

characteristic: sample description

characteristic: sample name

text: AQUA-FAANG

characteristic: secondary project

characteristic: specimen collection date

characteristic: submission description

characteristic: submission title


characteristic: SRA accession

text: Tricaine methanesulfonate (MS-222)

characteristic: anaesthetic or sedative name

characteristic: animal age at collection

characteristic: average water oxygen

characteristic: average water salinity

characteristic: derived from

text: post-juvenile adult stage

text: Ration pellets according to mouth size

text: fasted

characteristic: generations from wild

text: testis

characteristic: gonad type

text: post

characteristic: hatching

text: normal

text: specimen from organism

text: mature

characteristic: maturity state

text: Lethal anaesthetic and exsanguination

characteristic: method of euthanasia

text: Scophthalmus maximus

text: gonad

text: Domesticated diploid

characteristic: origin

characteristic: photoperiod

characteristic: post-hatching animal density

characteristic: post-hatching water temperature average

text: FAANG

text: gonochoric

characteristic: sampling day end time

characteristic: sampling day start time

characteristic: sampling weight

text: AQUA-FAANG

characteristic: specimen collection protocol

characteristic: time post fertilisation


characteristic: SRA accession

text: Tricaine methanesulfonate (MS-222)

characteristic: anaesthetic or sedative name

characteristic: animal age at collection

characteristic: average water oxygen

text: post-juvenile adult stage

characteristic: developmental stage

text: Ration pellets according to mouth size

characteristic: diet

text: fasted

characteristic: fasted status

characteristic: food restriction

text: ovary

text: post

text: normal

characteristic: health status at collection

text: specimen from organism

characteristic: material

text: mature

text: Lethal anaesthetic and exsanguination

text: Scophthalmus maximus

characteristic: organism

text: gonad

characteristic: organism part

text: Domesticated diploid

text: FAANG

characteristic: project

text: gonochoric

characteristic: reproductive strategy

text: Scophthalmus maximus; Gonad; Mature female

characteristic: sample description

characteristic: sample name

text: AQUA-FAANG

characteristic: secondary project

characteristic: specimen collection date

characteristic: standard length

characteristic: submission description

characteristic: submission title

characteristic: total length


characteristic: SRA accession

text: Tricaine methanesulfonate (MS-222)

characteristic: anaesthetic or sedative name

characteristic: animal age at collection

characteristic: average water oxygen

characteristic: average water salinity

characteristic: derived from

text: sexually immature stage

characteristic: developmental stage

text: Ration pellets according to mouth size

characteristic: diet

text: fasted

characteristic: generations from wild

text: restricted access

characteristic: gonad type

text: post

characteristic: hatching

text: normal

text: specimen from organism

text: immature

characteristic: maturity state

text: Lethal anaesthetic and exsanguination

characteristic: method of euthanasia

text: Scophthalmus maximus

text: head kidney

text: Domesticated diploid

characteristic: origin

characteristic: photoperiod

characteristic: post-hatching animal density

characteristic: post-hatching water temperature average

text: FAANG

text: gonochoric

text: Scophthalmus maximus; Head Kidney; Immature undetermined; control

characteristic: sampling day end time

characteristic: sampling day start time

characteristic: sampling weight

text: AQUA-FAANG

characteristic: specimen collection protocol

characteristic: time post fertilisation


characteristic: SRA accession

text: Tricaine methanesulfonate (MS-222)

characteristic: anaesthetic or sedative name

characteristic: animal age at collection

characteristic: average water oxygen

characteristic: average water salinity

characteristic: derived from

text: sexually immature stage

text: Ration pellets according to mouth size

text: fasted

characteristic: fasted status

characteristic: food restriction

text: restricted access

text: post

text: normal

characteristic: health status at collection

text: specimen from organism

characteristic: material

text: immature

text: Lethal anaesthetic and exsanguination

text: Scophthalmus maximus

characteristic: organism

text: head kidney

characteristic: organism part

text: Domesticated diploid

text: FAANG

characteristic: project

text: gonochoric

characteristic: reproductive strategy

text: Scophthalmus maximus; Head Kidney; Immature undetermined; Vibrio stimulated

characteristic: sample description

characteristic: sample name

text: AQUA-FAANG

characteristic: secondary project

characteristic: specimen collection date

characteristic: standard length

characteristic: submission description

characteristic: submission title

characteristic: total length


characteristic: SRA accession

text: Tricaine methanesulfonate (MS-222)

characteristic: anaesthetic or sedative name

characteristic: animal age at collection

characteristic: average water oxygen

characteristic: average water salinity

characteristic: derived from

text: sexually immature stage

characteristic: developmental stage

text: Ration pellets according to mouth size

characteristic: diet

text: fasted

characteristic: generations from wild

text: restricted access

characteristic: gonad type

text: post

characteristic: hatching

text: normal

text: specimen from organism

text: immature

characteristic: maturity state

text: Lethal anaesthetic and exsanguination

characteristic: method of euthanasia

text: Scophthalmus maximus

text: head kidney

text: Domesticated diploid

characteristic: origin

characteristic: photoperiod

characteristic: post-hatching animal density

characteristic: post-hatching water temperature average

text: FAANG

text: gonochoric

text: Scophthalmus maximus; Head Kidney; Immature undetermined; Poly:IC stimulated

characteristic: sampling day end time

characteristic: sampling day start time

characteristic: sampling weight

text: AQUA-FAANG

characteristic: specimen collection protocol

characteristic: time post fertilisation


characteristic: SRA accession

characteristic: derived from

text: pool of specimens

characteristic: material

text: Scophthalmus maximus

characteristic: organism

characteristic: pool creation date

characteristic: pool creation protocol

text: FAANG

characteristic: project

text: Late Blastula, embryonic material; pool; RNAseq material

characteristic: sample description

characteristic: sample name

text: AQUA-FAANG

characteristic: secondary project

characteristic: submission description

characteristic: submission title


text: pool of specimens

text: Scophthalmus maximus

text: FAANG

text: Gastrula (embryonic shield), embryonic material; pool; RNAseq material

text: AQUA-FAANG


text: pool of specimens

text: Scophthalmus maximus

text: FAANG

text: Early segmentation, embryonic material; pool; RNAseq material

text: AQUA-FAANG


text: pool of specimens

text: Scophthalmus maximus

text: FAANG

text: Mid segmentation, embryonic material; pool; RNAseq material

text: AQUA-FAANG


text: pool of specimens

text: Scophthalmus maximus

text: FAANG

text: Late segmentation, embryonic material; pool; RNAseq material

text: AQUA-FAANG

text: AQUA-FAANG metadata for turbot (Scophthalmus maximus) samples: WP1 (BodyMaps and DevMaps) & WP3 (ImmunoMaps)


text: pool of specimens

text: Scophthalmus maximus

text: FAANG

text: Prehatching stage, embryonic material; pool; RNAseq material

text: AQUA-FAANG


text: pool of specimens

text: Scophthalmus maximus

text: FAANG

text: Late Blastula, embryonic material; pool; CHIPseq material

text: AQUA-FAANG


text: pool of specimens

text: Scophthalmus maximus

text: FAANG

text: Gastrula (embryonic shield), embryonic material; pool; CHIPseq material

text: AQUA-FAANG


text: pool of specimens

text: Scophthalmus maximus

text: FAANG

text: Early segmentation, embryonic material; pool; CHIPseq material

text: AQUA-FAANG


text: pool of specimens

text: Scophthalmus maximus

text: FAANG

text: Mid segmentation, embryonic material; pool; CHIPseq material

text: AQUA-FAANG


text: pool of specimens

text: Scophthalmus maximus

text: FAANG

text: Late segmentation, embryonic material; pool; CHIPseq material

text: AQUA-FAANG


text: pool of specimens

text: Scophthalmus maximus

text: FAANG

text: Prehatching stage, embryonic material; pool; CHIPseq material

text: AQUA-FAANG


text: pool of specimens

text: Salmo salar

text: FAANG

text: pool of control (pbs) invivo head kindey samples from ABDN_invivo_pbs_1 to 6 - input ChIP library for in-vivo pbs

text: AQUA-FAANG

text: AQUA-FAANG metadata for Atlantic salmon samples: WP3 (ImmunoMaps)

University of Aberdeen

Address: Zoology Building, Tillydrone Ave, Aberdeen, Scotland, United Kingdom AB24 2TZ

Samuel Martin

FirstName: Samuel

LastName: Martin

Shahmir Naseer

FirstName: Shahmir

LastName: Naseer


text: pool of specimens

text: Salmo salar

text: FAANG

text: pool of Poly:IC treated, invivo head kindey samples from ABDN_invivo_polyic_1 to 6 - input ChIP library for in-vivo Poly:IC

text: AQUA-FAANG


text: pool of specimens

text: Salmo salar

text: FAANG

text: pool of Vibrio treated, invivo head kindey samples from ABDN_invivo_vibrio_1 to 6 - input ChIP library for in-vivo Vibrio

text: AQUA-FAANG


text: pool of specimens

text: Salmo salar

text: FAANG

text: pool of control, invitro head kindey samples from ABDN_invitro_1 to 6 - input ChIP library for in-vitro control

text: AQUA-FAANG


text: pool of specimens

text: Salmo salar

text: FAANG

text: pool of Poly:IC treated, invitro head kindey samples from ABDN_invitro_1 to 6 - input ChIP library for in-vitro Poly:IC

text: AQUA-FAANG


text: pool of specimens

text: Salmo salar

text: FAANG

text: pool of Vibrio treated, invitro head kindey samples from ABDN_invitro_1 to 6 - input ChIP library for in-vitro Vibrio

text: AQUA-FAANG


text: Tricaine methanesulfonate (MS-222)

characteristic: anaesthetic or sedative name

characteristic: animal age at collection

characteristic: average water salinity

text: sexually immature stage

characteristic: developmental stage

text: fasted

characteristic: fasted status

characteristic: food restriction

characteristic: fork length

characteristic: genetic background

text: testis

characteristic: gonad type

text: post

characteristic: hatching

text: normal

characteristic: health status at collection

text: specimen from organism

text: immature

characteristic: maturity state

text: Lethal anaesthetic and exsanguination

characteristic: method of euthanasia

text: Cyprinus carpio carpio

text: brain

characteristic: organism part

text: Domesticated Double-haploid

characteristic: origin

characteristic: photoperiod

unit: Kg/L

characteristic: post-hatching animal density

characteristic: post-hatching water temperature average

text: FAANG

text: gonochoric

characteristic: reproductive strategy

text: Cyprinus carpio, Immature male (J1), Brain

characteristic: sampling day end time

text: AQUA-FAANG

characteristic: specimen collection date

characteristic: standard length

text: Common carp (Cyprinus carpio) samples for FAANG, AQUA-FAANG, BodyMap (WP1)

characteristic: total length

text: Closed water system (recirculatory)

characteristic: water rearing system

WUR Wageningen University & Research

Address: Droevendaalsesteeg 4, 6708 PB Wageningen, The Netherlands

Name:
ZIGR Polish Academy of Sciences
Institute of Ichthyobiology and Aquaculture in Golysz

Address: Kalinowa 2, Zaborze 43-520 Chybie, Poland

Ilgiz Irnazarow

FirstName: Ilgiz

LastName: Irnazarow

Joanna Szczygiel

FirstName: Joanna

LastName: Szczygiel

Lukasz Napora-Rutkowski

FirstName: Lukasz

LastName: Napora-Rutkowski


characteristic: SRA accession

text: Tricaine methanesulfonate (MS-222)

characteristic: anaesthetic or sedative name

characteristic: animal age at collection

characteristic: average water salinity

characteristic: derived from

text: sexually immature stage

characteristic: developmental stage

text: fasted

characteristic: fasted status

characteristic: food restriction

characteristic: fork length

characteristic: genetic background

text: testis

text: post

text: normal

text: specimen from organism

characteristic: material

text: immature

text: Lethal anaesthetic and exsanguination

text: Cyprinus carpio carpio

characteristic: organism

text: gill filament

text: Domesticated Double-haploid

text: FAANG

characteristic: project

text: gonochoric

text: Cyprinus carpio, Immature male (J1), Gill

characteristic: sample description

characteristic: sample name

characteristic: sampling day start time

characteristic: sampling weight

text: AQUA-FAANG

characteristic: secondary project

characteristic: specimen collection protocol

characteristic: submission description

characteristic: submission title

characteristic: time post fertilisation

text: Closed water system (recirculatory)


characteristic: SRA accession

text: Tricaine methanesulfonate (MS-222)

characteristic: anaesthetic or sedative name

characteristic: animal age at collection

characteristic: average water salinity

characteristic: derived from

text: sexually immature stage

characteristic: developmental stage

text: fasted

text: testis

characteristic: gonad type

text: post

characteristic: hatching

text: normal

characteristic: health status at collection

text: specimen from organism

text: immature

characteristic: maturity state

text: Lethal anaesthetic and exsanguination

characteristic: method of euthanasia

text: Cyprinus carpio carpio

text: gonad

characteristic: organism part

text: Domesticated Double-haploid

characteristic: origin

characteristic: photoperiod

characteristic: post-hatching animal density

characteristic: post-hatching water temperature average

text: FAANG

text: gonochoric

characteristic: reproductive strategy

text: Cyprinus carpio, Immature male (J1), Gonad

characteristic: sampling day end time

text: AQUA-FAANG

characteristic: specimen collection date

characteristic: standard length

characteristic: total length

text: Closed water system (recirculatory)

characteristic: water rearing system


characteristic: SRA accession

text: Tricaine methanesulfonate (MS-222)

characteristic: anaesthetic or sedative name

characteristic: animal age at collection

characteristic: average water salinity

characteristic: derived from

text: sexually immature stage

characteristic: developmental stage

text: fasted

characteristic: fasted status

characteristic: food restriction

characteristic: fork length

characteristic: genetic background

text: testis

text: post

text: normal

text: specimen from organism

characteristic: material

text: immature

text: Lethal anaesthetic and exsanguination

text: Cyprinus carpio carpio

characteristic: organism

text: head kidney

text: Domesticated Double-haploid

text: FAANG

characteristic: project

text: gonochoric

text: Cyprinus carpio, Immature male (J1), Head Kidney

characteristic: sample description

characteristic: sample name

characteristic: sampling day start time

characteristic: sampling weight

text: AQUA-FAANG

characteristic: secondary project

characteristic: specimen collection protocol

characteristic: submission description

characteristic: submission title

characteristic: time post fertilisation

text: Closed water system (recirculatory)


characteristic: SRA accession

text: Tricaine methanesulfonate (MS-222)

characteristic: anaesthetic or sedative name

characteristic: animal age at collection

characteristic: average water salinity

characteristic: derived from

text: sexually immature stage

characteristic: developmental stage

text: fasted

text: testis

characteristic: gonad type

text: post

characteristic: hatching

text: normal

characteristic: health status at collection

text: specimen from organism

text: immature

characteristic: maturity state

text: Lethal anaesthetic and exsanguination

characteristic: method of euthanasia

text: Cyprinus carpio carpio

text: liver

characteristic: organism part

text: Domesticated Double-haploid

characteristic: origin

characteristic: photoperiod

characteristic: post-hatching animal density

characteristic: post-hatching water temperature average

text: FAANG

text: gonochoric

characteristic: reproductive strategy

text: Cyprinus carpio, Immature male (J1), Liver

characteristic: sampling day end time

text: AQUA-FAANG

characteristic: specimen collection date

characteristic: standard length

characteristic: total length

text: Closed water system (recirculatory)

characteristic: water rearing system


characteristic: SRA accession

text: Tricaine methanesulfonate (MS-222)

characteristic: anaesthetic or sedative name

characteristic: animal age at collection

characteristic: average water salinity

characteristic: derived from

text: sexually immature stage

characteristic: developmental stage

text: fasted

characteristic: fasted status

characteristic: food restriction

characteristic: fork length

characteristic: genetic background

text: testis

text: post

text: normal

text: specimen from organism

characteristic: material

text: immature

text: Lethal anaesthetic and exsanguination

text: Cyprinus carpio carpio

characteristic: organism

text: skeletal muscle tissue

text: Domesticated Double-haploid

text: FAANG

characteristic: project

text: gonochoric

text: Cyprinus carpio, Immature male (J1), Muscle

characteristic: sample description

characteristic: sample name

characteristic: sampling day start time

characteristic: sampling weight

text: AQUA-FAANG

characteristic: secondary project

characteristic: specimen collection protocol

characteristic: submission description

characteristic: submission title

characteristic: time post fertilisation

text: Closed water system (recirculatory)


characteristic: SRA accession

text: Tricaine methanesulfonate (MS-222)

characteristic: anaesthetic or sedative name

characteristic: animal age at collection

characteristic: average water salinity

characteristic: derived from

text: sexually immature stage

characteristic: developmental stage

text: fasted

text: testis

characteristic: gonad type

text: post

characteristic: hatching

text: normal

characteristic: health status at collection

text: specimen from organism

text: immature

characteristic: maturity state

text: Lethal anaesthetic and exsanguination

characteristic: method of euthanasia

text: Cyprinus carpio carpio

text: terminal part of digestive tract

characteristic: organism part

text: Domesticated Double-haploid

characteristic: origin

characteristic: photoperiod

characteristic: post-hatching animal density

characteristic: post-hatching water temperature average

text: FAANG

text: gonochoric

characteristic: reproductive strategy

text: Cyprinus carpio, Immature male (J1), Distal Intestine

characteristic: sampling day end time

text: AQUA-FAANG

characteristic: specimen collection date

characteristic: standard length

characteristic: total length

text: Closed water system (recirculatory)

characteristic: water rearing system


characteristic: SRA accession

text: Tricaine methanesulfonate (MS-222)

characteristic: anaesthetic or sedative name

characteristic: animal age at collection

characteristic: average water salinity

characteristic: derived from

text: sexually immature stage

characteristic: developmental stage

text: fasted

characteristic: fasted status

characteristic: food restriction

characteristic: fork length

characteristic: genetic background

text: ovary

text: post

text: normal

text: specimen from organism

characteristic: material

text: immature

text: Lethal anaesthetic and exsanguination

text: Cyprinus carpio carpio

characteristic: organism

text: brain

text: Domesticated Double-haploid

text: FAANG

characteristic: project

text: gonochoric

text: Cyprinus carpio, Immature female (J2), Brain

characteristic: sample description

characteristic: sample name

characteristic: sampling day start time

characteristic: sampling weight

text: AQUA-FAANG

characteristic: secondary project

characteristic: specimen collection protocol

characteristic: submission description

characteristic: submission title

characteristic: time post fertilisation

text: Closed water system (recirculatory)


characteristic: SRA accession

text: Tricaine methanesulfonate (MS-222)

characteristic: anaesthetic or sedative name

characteristic: animal age at collection

characteristic: average water salinity

characteristic: derived from

text: sexually immature stage

characteristic: developmental stage

text: fasted

text: ovary

characteristic: gonad type

text: post

characteristic: hatching

text: normal

characteristic: health status at collection

text: specimen from organism

text: immature

characteristic: maturity state

text: Lethal anaesthetic and exsanguination

characteristic: method of euthanasia

text: Cyprinus carpio carpio

text: gill filament

characteristic: organism part

text: Domesticated Double-haploid

characteristic: origin

characteristic: photoperiod

characteristic: post-hatching animal density

characteristic: post-hatching water temperature average

text: FAANG

text: gonochoric

characteristic: reproductive strategy

text: Cyprinus carpio, Immature female (J2), Gill

characteristic: sampling day end time

text: AQUA-FAANG

characteristic: specimen collection date

characteristic: standard length

characteristic: total length

text: Closed water system (recirculatory)

characteristic: water rearing system


characteristic: SRA accession

text: Tricaine methanesulfonate (MS-222)

characteristic: anaesthetic or sedative name

characteristic: animal age at collection

characteristic: average water salinity

characteristic: derived from

text: sexually immature stage

characteristic: developmental stage

text: fasted

characteristic: fasted status

characteristic: food restriction

characteristic: fork length

characteristic: genetic background

text: ovary

text: post

text: normal

text: specimen from organism

characteristic: material

text: immature

text: Lethal anaesthetic and exsanguination

text: Cyprinus carpio carpio

characteristic: organism

text: gonad

text: Domesticated Double-haploid

text: FAANG

characteristic: project

text: gonochoric

text: Cyprinus carpio, Immature female (J2), Gonad

characteristic: sample description

characteristic: sample name

characteristic: sampling day start time

characteristic: sampling weight

text: AQUA-FAANG

characteristic: secondary project

characteristic: specimen collection protocol

characteristic: submission description

characteristic: submission title

characteristic: time post fertilisation

text: Closed water system (recirculatory)


characteristic: SRA accession

text: Tricaine methanesulfonate (MS-222)

characteristic: anaesthetic or sedative name

characteristic: animal age at collection

characteristic: average water salinity

characteristic: derived from

text: sexually immature stage

characteristic: developmental stage

text: fasted

text: ovary

characteristic: gonad type

text: post

characteristic: hatching

text: normal

characteristic: health status at collection

text: specimen from organism

text: immature

characteristic: maturity state

text: Lethal anaesthetic and exsanguination

characteristic: method of euthanasia

text: Cyprinus carpio carpio

text: head kidney

characteristic: organism part

text: Domesticated Double-haploid

characteristic: origin

characteristic: photoperiod

characteristic: post-hatching animal density

characteristic: post-hatching water temperature average

text: FAANG

text: gonochoric

characteristic: reproductive strategy

text: Cyprinus carpio, Immature female (J2), Head Kidney

characteristic: sampling day end time

text: AQUA-FAANG

characteristic: specimen collection date

characteristic: standard length

characteristic: total length

text: Closed water system (recirculatory)

characteristic: water rearing system


characteristic: SRA accession

text: Tricaine methanesulfonate (MS-222)

characteristic: anaesthetic or sedative name

characteristic: animal age at collection

characteristic: average water salinity

characteristic: derived from

text: sexually immature stage

characteristic: developmental stage

text: fasted

characteristic: fasted status

characteristic: food restriction

characteristic: fork length

characteristic: genetic background

text: ovary

text: post

text: normal

text: specimen from organism

characteristic: material

text: immature

text: Lethal anaesthetic and exsanguination

text: Cyprinus carpio carpio

characteristic: organism

text: liver

text: Domesticated Double-haploid

text: FAANG

characteristic: project

text: gonochoric

text: Cyprinus carpio, Immature female (J2), Liver

characteristic: sample description

characteristic: sample name

characteristic: sampling day start time

characteristic: sampling weight

text: AQUA-FAANG

characteristic: secondary project

characteristic: specimen collection protocol

characteristic: submission description

characteristic: submission title

characteristic: time post fertilisation

text: Closed water system (recirculatory)