text: Southwest University

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: metagenome

text: replicate=biological replicate 7


status: PUBLIC

characteristic: External Id

text: Southwest University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: not collected

tag: attribute

text: not collected

text: not collected

characteristic: host

text: not collected

text: not collected

text: metagenome

characteristic: organism

text: replicate=biological replicate 8

characteristic: replicate

text: Metagenome or environmental sample from metagenome

characteristic: title


text: Southwest University

text: live

text: Metagenome or environmental

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: metagenome

text: replicate=biological replicate 9


text: Southwest University

text: live

text: Metagenome or environmental

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: metagenome

text: replicate=biological replicate 10


text: Southwest University

text: live

text: Metagenome or environmental

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: metagenome

text: replicate=biological replicate 11


text: Southwest University

text: live

text: Metagenome or environmental

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: metagenome

text: replicate=biological replicate 12


text: Xuewei Wang, Molecular Medicine, University of South Florida

text: live

text: Generic

text: Retinal ganglion cells

characteristic: cell type

text: missing

characteristic: genotype

text: missing

text: Mus musculus

text: Retinal ganglion cells

text: RNA-Seq-I Retinal ganglion cells, Ezh2 overexpression, replicate 3


text: live

text: Generic

text: Retinal ganglion cells

text: missing

text: missing

text: Mus musculus

text: Retinal ganglion cells

text: RNA-Seq-I Retinal ganglion cells, Ezh2 overexpression, replicate 2


text: live

text: Generic

text: Retinal ganglion cells

text: missing

text: missing

text: Mus musculus

text: Retinal ganglion cells

text: RNA-Seq-I Retinal ganglion cells, Ezh2 overexpression, replicate 1


text: live

text: Generic

text: Retinal ganglion cells

text: missing

text: missing

text: Mus musculus

text: Retinal ganglion cells

text: RNA-Seq-I Retinal ganglion cells, GFP overexpression, replicate 3


text: live

text: Generic

text: Retinal ganglion cells

text: missing

text: missing

text: Mus musculus

text: Retinal ganglion cells

text: RNA-Seq-I Retinal ganglion cells, GFP overexpression, replicate 2


text: live

text: Generic

text: Retinal ganglion cells

text: missing

text: missing

text: Mus musculus

text: Retinal ganglion cells

text: RNA-Seq-I Retinal ganglion cells, GFP overexpression, replicate 1


text: live

text: Generic

text: Retinal ganglion cells

text: missing

text: missing

text: Mus musculus

text: Retinal ganglion cells

text: RNA-Seq-II Retinal ganglion cells, Ezh2-Y726D overexpression, replicate 3


text: live

text: Generic

text: Retinal ganglion cells

text: missing

text: missing

text: Mus musculus

text: Retinal ganglion cells

text: RNA-Seq-II Retinal ganglion cells, Ezh2-Y726D overexpression, replicate 2


text: live

text: Generic

text: Retinal ganglion cells

text: missing

text: missing

text: Mus musculus

text: Retinal ganglion cells

text: RNA-Seq-II Retinal ganglion cells, Ezh2-Y726D overexpression, replicate 1


text: live

text: Generic

text: Retinal ganglion cells

text: missing

text: missing

text: Mus musculus

text: Retinal ganglion cells

text: RNA-Seq-II Retinal ganglion cells, GFP overexpression, replicate 3


text: live

text: Generic

text: Retinal ganglion cells

text: missing

text: missing

text: Mus musculus

text: Retinal ganglion cells

text: RNA-Seq-II Retinal ganglion cells, GFP overexpression, replicate 2


text: live

text: Generic

text: Retinal ganglion cells

text: missing

text: missing

text: Mus musculus

text: Retinal ganglion cells

text: RNA-Seq-II Retinal ganglion cells, GFP overexpression, replicate 1


text: live

text: Generic

text: Retinal ganglion cells

text: missing

text: missing

text: Mus musculus

text: Retinal ganglion cells

text: RRBS Retinal ganglion cells, Ezh2-Y726D overexpression, injured, replicate 3


text: live

text: Generic

text: Retinal ganglion cells

text: missing

text: missing

text: Mus musculus

text: Retinal ganglion cells

text: RRBS Retinal ganglion cells, Ezh2-Y726D overexpression, injured, replicate 2


text: live

text: Generic

text: Retinal ganglion cells

text: missing

text: missing

text: Mus musculus

text: Retinal ganglion cells

text: RRBS Retinal ganglion cells, Ezh2-Y726D overexpression, injured, replicate 1


text: live

text: Generic

text: Retinal ganglion cells

text: missing

text: missing

text: Mus musculus

text: Retinal ganglion cells

text: RRBS Retinal ganglion cells, Ezh2 overexpression, injured, replicate 3


text: Xuewei Wang, Molecular Medicine, University of South Florida

text: live

text: Generic

text: Retinal ganglion cells

text: missing

text: missing

text: Mus musculus

text: Retinal ganglion cells

text: RRBS Retinal ganglion cells, Ezh2 overexpression, injured, replicate 2


text: live

text: Generic

text: Retinal ganglion cells

text: missing

text: missing

text: Mus musculus

text: Retinal ganglion cells

text: RRBS Retinal ganglion cells, Ezh2 overexpression, injured, replicate 1


text: live

text: Generic

text: Retinal ganglion cells

text: missing

text: missing

text: Mus musculus

text: Retinal ganglion cells

text: RRBS Retinal ganglion cells, GFP overexpression, injured, replicate 3


text: live

text: Generic

text: Retinal ganglion cells

text: missing

text: missing

text: Mus musculus

text: Retinal ganglion cells

text: RRBS Retinal ganglion cells, GFP overexpression, injured, replicate 2


text: live

text: Generic

text: Retinal ganglion cells

text: missing

text: missing

text: Mus musculus

text: Retinal ganglion cells

text: RRBS Retinal ganglion cells, GFP overexpression, injured, replicate 1


text: live

text: Generic

text: Retinal ganglion cells

text: missing

text: missing

text: Mus musculus

text: Retinal ganglion cells

text: RRBS Retinal ganglion cells, Ezh2-Y726D overexpression, uninjured, replicate 3


text: live

text: Generic

text: Retinal ganglion cells

text: missing

text: missing

text: Mus musculus

text: Retinal ganglion cells

text: RRBS Retinal ganglion cells, Ezh2-Y726D overexpression, uninjured, replicate 2


text: live

text: Generic

text: Retinal ganglion cells

text: missing

text: missing

text: Mus musculus

text: Retinal ganglion cells

text: RRBS Retinal ganglion cells, Ezh2-Y726D overexpression, uninjured, replicate 1


text: live

text: Generic

text: Retinal ganglion cells

text: missing

text: missing

text: Mus musculus

text: Retinal ganglion cells

text: RRBS Retinal ganglion cells, Ezh2 overexpression, uninjured, replicate 3


text: live

text: Generic

text: Retinal ganglion cells

text: missing

text: missing

text: Mus musculus

text: Retinal ganglion cells

text: RRBS Retinal ganglion cells, Ezh2 overexpression, uninjured, replicate 2


text: live

text: Generic

text: Retinal ganglion cells

text: missing

text: missing

text: Mus musculus

text: Retinal ganglion cells

text: RRBS Retinal ganglion cells, Ezh2 overexpression, uninjured, replicate 1


text: live

text: Generic

text: Retinal ganglion cells

text: missing

text: missing

text: Mus musculus

text: Retinal ganglion cells

text: RRBS Retinal ganglion cells, GFP overexpression, uninjured, replicate 3


text: live

text: Generic

text: Retinal ganglion cells

text: missing

text: missing

text: Mus musculus

text: Retinal ganglion cells

text: RRBS Retinal ganglion cells, GFP overexpression, uninjured, replicate 2


text: live

text: Generic

text: Retinal ganglion cells

text: missing

text: missing

text: Mus musculus

text: Retinal ganglion cells

text: RRBS Retinal ganglion cells, GFP overexpression, uninjured, replicate 1


text: Beijing Friendship Hospital

text: live

text: Human

characteristic: age

text: Beijing Friendship Hospital

text: China:Beijing

characteristic: isolate

text: Homo sapiens

text: male

characteristic: sex

text: prostate

characteristic: tissue

text: Human sample from Homo sapiens


KACC 23336

characteristic: External Id

text: National Institute of Agricultural Sciences, Rural Development Administration

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Hyorim Choi

text: South Korea: Jinan-gun, Jeollabuk-do

text: Honeybee

text: Hyorim Choi

text: Erwinia sp. HR93

text: single cell

characteristic: strain

text: Microbe sample from Erwinia sp. HR93


text: University of Macau

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

text: 8 Month

text: Chuxia Deng

text: Licen Li

text: China

text: Mus musculus

text: male

text: Liver

text: Sirt6 co/co


text: University of Macau

text: live

text: Model organism or animal

characteristic: NCBI submission package

characteristic: SRA accession

text: 8 Month

text: Chuxia Deng

text: Licen Li

text: Sirt6co/co Alb-cre

text: China

text: Mus musculus

characteristic: organism

text: male

text: Liver

text: Sirt6 co/co Alb-cre


text: Vall d'Hebron Institute of Research (VHIR)

text: live

text: Pathogen.cl

text: Vall d'Hebron University Hospital

text: Spain: Barcelona

text: Homo sapiens

characteristic: host

text: Hepatitis E

text: plasma

text: 41.43 N 2.14 E

text: Paslahepevirus balayani

characteristic: title


msh6 SALK_037557c rep1

text: UC Davis

text: live

text: MIGS.eu

text: Whole Rossette. DNeasy Plant Mini Kit

text: Homozygous for t-DNA insertion

characteristic: description

text: laboratory biome [ENVO:01001110]

text: controlled environment [ENVO:01000877]

text: potting soil [ENVO:00002169]

text: USA: Davis, California

text: 38.5382 N 121.7617 W

text: Arabidopsis thaliana

text: Columbia-0 (Col-0)

text: MIGS Eukaryotic sample from Arabidopsis thaliana

text: Position 1


msh6 SALK_037557c rep2

text: UC Davis

text: live

text: MIGS.eu

text: Whole Rossette. DNeasy Plant Mini Kit

text: Homozygous for t-DNA insertion

text: laboratory biome [ENVO:01001110]

text: controlled environment [ENVO:01000877]

text: potting soil [ENVO:00002169]

text: USA: Davis, California

text: 38.5382 N 121.7617 W

text: Arabidopsis thaliana

text: Columbia-0 (Col-0)

text: Position 2


msh6 SALK_037557c rep3

text: UC Davis

text: live

text: MIGS.eu

text: Whole Rossette. DNeasy Plant Mini Kit

text: Homozygous for t-DNA insertion

text: laboratory biome [ENVO:01001110]

text: controlled environment [ENVO:01000877]

text: potting soil [ENVO:00002169]

text: USA: Davis, California

text: 38.5382 N 121.7617 W

text: Arabidopsis thaliana

text: Columbia-0 (Col-0)

text: Position 3


msh6 SALK_037557c rep4

text: UC Davis

text: live

text: MIGS.eu

text: Whole Rossette. DNeasy Plant Mini Kit

text: Homozygous for t-DNA insertion

text: laboratory biome [ENVO:01001110]

text: controlled environment [ENVO:01000877]

text: potting soil [ENVO:00002169]

text: USA: Davis, California

text: 38.5382 N 121.7617 W

text: Arabidopsis thaliana

text: Columbia-0 (Col-0)

text: Position 4


msh6 SALK_037557c rep5

text: UC Davis

text: live

text: MIGS.eu

text: Whole Rossette. DNeasy Plant Mini Kit

text: Homozygous for t-DNA insertion

text: laboratory biome [ENVO:01001110]

text: controlled environment [ENVO:01000877]

text: potting soil [ENVO:00002169]

text: USA: Davis, California

text: 38.5382 N 121.7617 W

text: Arabidopsis thaliana

text: Columbia-0 (Col-0)

text: Position 5


Wt Col-0 rep7

text: UC Davis

text: live

text: MIGS.eu

text: Whole Rossette. DNeasy Plant Mini Kit

text: Heterozygous for t-DNA insertion

text: laboratory biome [ENVO:01001110]

text: controlled environment [ENVO:01000877]

text: potting soil [ENVO:00002169]

text: USA: Davis, California

text: 38.5382 N 121.7617 W

text: Arabidopsis thaliana

text: Columbia-0 (Col-0)

text: Position 6


msh6 SALK_037557c rep7

text: UC Davis

text: live

text: MIGS.eu

text: Whole Rossette. DNeasy Plant Mini Kit

text: Homozygous for t-DNA insertion

text: laboratory biome [ENVO:01001110]

text: controlled environment [ENVO:01000877]

text: potting soil [ENVO:00002169]

text: USA: Davis, California

text: 38.5382 N 121.7617 W

text: Arabidopsis thaliana

text: Columbia-0 (Col-0)

text: Position 7


msh6 SALK_037557c rep8

text: UC Davis

text: live

text: MIGS.eu

text: Whole Rossette. DNeasy Plant Mini Kit

text: Homozygous for t-DNA insertion

text: laboratory biome [ENVO:01001110]

text: controlled environment [ENVO:01000877]

text: potting soil [ENVO:00002169]

text: USA: Davis, California

text: 38.5382 N 121.7617 W

text: Arabidopsis thaliana

text: Columbia-0 (Col-0)

text: Position 8


Wt Col-0 rep8

text: UC Davis

text: live

text: MIGS.eu

text: Whole Rossette. DNeasy Plant Mini Kit

text: Heterozygous for t-DNA insertion

text: laboratory biome [ENVO:01001110]

text: controlled environment [ENVO:01000877]

text: potting soil [ENVO:00002169]

text: USA: Davis, California

text: 38.5382 N 121.7617 W

text: Arabidopsis thaliana

text: Columbia-0 (Col-0)

text: Position 9


msh6 SALK_089638c rep2

text: UC Davis

text: live

text: MIGS.eu

text: Whole Rossette. DNeasy Plant Mini Kit

text: Homozygous for t-DNA insertion

text: laboratory biome [ENVO:01001110]

text: controlled environment [ENVO:01000877]

text: potting soil [ENVO:00002169]

text: USA: Davis, California

text: 38.5382 N 121.7617 W

text: Arabidopsis thaliana

text: Columbia-0 (Col-0)

text: Position 10


msh6 SALK_089638c het rep3

text: UC Davis

text: live

text: MIGS.eu

text: Whole Rossette. DNeasy Plant Mini Kit

text: Heterozygous for t-DNA insertion

text: laboratory biome [ENVO:01001110]

text: controlled environment [ENVO:01000877]

text: potting soil [ENVO:00002169]

text: USA: Davis, California

text: 38.5382 N 121.7617 W

text: Arabidopsis thaliana

text: Columbia-0 (Col-0)

text: Position 11


Wt Col-0 CS60000 rep1

text: UC Davis

text: live

text: MIGS.eu

text: Whole Rossette. DNeasy Plant Mini Kit

text: Wild type Col-0

text: laboratory biome [ENVO:01001110]

text: controlled environment [ENVO:01000877]

text: potting soil [ENVO:00002169]

text: USA: Davis, California

text: 38.5382 N 121.7617 W

text: Arabidopsis thaliana

text: Columbia-0 (Col-0)

text: Position 12


Wt Col-0 CS60000 rep2

text: UC Davis

text: live

text: MIGS.eu

text: Whole Rossette. DNeasy Plant Mini Kit

text: Wild type Col-0

text: laboratory biome [ENVO:01001110]

text: controlled environment [ENVO:01000877]

text: potting soil [ENVO:00002169]

text: USA: Davis, California

text: 38.5382 N 121.7617 W

text: Arabidopsis thaliana

text: Columbia-0 (Col-0)

text: Position 13


Wt Col-0 CS60000 rep3

text: UC Davis

text: live

text: MIGS.eu

text: Whole Rossette. DNeasy Plant Mini Kit

text: Wild type Col-0

text: laboratory biome [ENVO:01001110]

text: controlled environment [ENVO:01000877]

text: potting soil [ENVO:00002169]

text: USA: Davis, California

text: 38.5382 N 121.7617 W

text: Arabidopsis thaliana

text: Columbia-0 (Col-0)

text: Position 14


Wt Col-0 CS60000 rep4

text: UC Davis

text: live

text: MIGS.eu

text: Whole Rossette. DNeasy Plant Mini Kit

text: Wild type Col-0

text: laboratory biome [ENVO:01001110]

text: controlled environment [ENVO:01000877]

text: potting soil [ENVO:00002169]

text: USA: Davis, California

text: 38.5382 N 121.7617 W

text: Arabidopsis thaliana

text: Columbia-0 (Col-0)

text: Position 15


Wt Col-0 CS60000 rep5

text: UC Davis

text: live

text: MIGS.eu

text: Whole Rossette. DNeasy Plant Mini Kit

text: Wild type Col-0

text: laboratory biome [ENVO:01001110]

text: controlled environment [ENVO:01000877]

text: potting soil [ENVO:00002169]

text: USA: Davis, California

text: 38.5382 N 121.7617 W

text: Arabidopsis thaliana

text: Columbia-0 (Col-0)

text: Position 16


Wt Col-0 CS60000 rep6

text: UC Davis

text: live

text: MIGS.eu

text: Whole Rossette. DNeasy Plant Mini Kit

text: Wild type Col-0

text: laboratory biome [ENVO:01001110]

text: controlled environment [ENVO:01000877]

text: potting soil [ENVO:00002169]

text: USA: Davis, California

text: 38.5382 N 121.7617 W

text: Arabidopsis thaliana

text: Columbia-0 (Col-0)

text: Position 17


text: Shandong University (Qingdao Campus)

text: live

text: Microbe, viral or environmental

text: China

text: Homo sapiens

text: digestive system

characteristic: isolation-source

text: Enterococcus faecalis

text: environmental sample

text: Microbe sample from Enterococcus faecalis


text: Shandong University

text: live

text: Microbe, viral or environmental

text: China

text: missing

characteristic: isolate

text: digestive system

text: Homo sapiens

text: Bifidobacterium animalis

text: enviromental sample

text: Microbe sample from Bifidobacterium animalis


text: Dr. Marco Colonna, Path/Immuno, WUSM

text: live

text: Generic

text: Live, CD45+ cells

characteristic: cell type

text: missing

text: missing

text: Homo sapiens

text: Blood

text: Blood

characteristic: tissue

text: CD34_Blood_Culture, GM-CSF/Flt3L/SCF

text: GM-CSF, Flt3-L, SCF

characteristic: treatment


characteristic: External Id

text: Dr. Marco Colonna, Path/Immuno, WUSM

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: Generic

text: Live, CD45+ cells

text: missing

text: missing

text: Homo sapiens

text: Bone Marrow

text: Bone Marrow

text: CD34_BM_Culture, IL7/Flt3L/SCF

text: IL-7, FLT3-L, SCF


text: Dr. Marco Colonna, Path/Immuno, WUSM

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Generic

text: Sorting Strategy 2 (Described in Extended Data Fig. 5)

text: missing

text: missing

text: Homo sapiens

text: Tonsil

text: Tonsil

text: Tonsil_Multiome_2, Chromium Single Cell Multiome ATAC, Sorting Strategy 2


text: Dr. Marco Colonna, Path/Immuno, WUSM

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: missing

text: missing

text: Homo sapiens

text: Tonsil

text: Tonsil

text: Tonsil_Multiome_2, Chromium Single Cell Multiome Gene Expression, Sorting Strategy 2


text: Dr. Marco Colonna, Path/Immuno, WUSM

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Sorting Strategy 1 (Described in Extended Data Fig. 5)

text: missing

text: missing

text: Homo sapiens

text: Tonsil

text: Tonsil

text: Tonsil_Multiome_1B, Chromium Single Cell Multiome Gene Expression, Sorting Strategy 1


text: Dr. Marco Colonna, Path/Immuno, WUSM

text: live

text: Generic

text: missing

text: missing

text: Homo sapiens

characteristic: organism

text: Tonsil

text: Tonsil

text: Tonsil_Multiome_1B, Chromium Single Cell Multiome ATAC, Sorting Strategy 1


text: Dr. Marco Colonna, Path/Immuno, WUSM

text: live

text: Generic

text: missing

text: missing

text: Homo sapiens

text: Tonsil

text: Tonsil

text: Tonsil_Multiome_1A, Chromium Single Cell Multiome Gene Expression, Sorting Strategy 1

characteristic: title


text: Dr. Marco Colonna, Path/Immuno, WUSM

text: live

text: Generic

text: missing

text: missing

text: Homo sapiens

text: Tonsil

text: Tonsil

text: Tonsil_Multiome_1A, Chromium Single Cell Multiome ATAC_Sorting Strategy 1


text: Dr. Marco Colonna, Path/Immuno, WUSM

text: live

text: Generic

text: Lin- NCR- BDCA2- CD34- CD1c- CD4- CD161- DR+ cells sorted from tonsil

text: missing

text: missing

text: Homo sapiens

text: Tonsil

text: Tonsil

text: Lin-NCR-BDCA2-CD34-CD1c-CD4-CD161-DR+ cells sorted from tonsil, 3 TotalSeqB antibodies

text: GM-CSF, Flt3L, SCF


text: Dr. Marco Colonna, Path/Immuno, WUSM

text: live

text: Generic

text: CD45+CD3-CD19- cells sorted from lamina propria of terminal ileum

text: missing

text: missing

text: Homo sapiens

text: Terminal ileum

text: Terminal ileum

text: N-7420-3, Healthy Control, Patient 4


text: Dr. Marco Colonna, Path/Immuno, WUSM

text: live

text: Generic

text: missing

text: missing

text: Homo sapiens

text: Terminal ileum

text: Terminal ileum

text: N-1425-4, Healthy Control, Patient 3


text: Dr. Marco Colonna, Path/Immuno, WUSM

text: live

text: Generic

text: missing

text: missing

text: Homo sapiens

text: Terminal ileum

text: Terminal ileum

text: CD-1818-6, Chron's Disease, Patient 2 (non-inflammed)


text: Dr. Marco Colonna, Path/Immuno, WUSM

text: live

text: Generic

text: missing

text: missing

text: Homo sapiens

text: Terminal ileum

text: Terminal ileum

text: CD-1818-4, Chron's Disease, Patient 2 (inflamed)


text: Dr. Marco Colonna, Path/Immuno, WUSM

text: live

text: Generic

text: missing

text: missing

text: Homo sapiens

text: Terminal ileum

text: Terminal ileum

text: CD-1813-7, Chron's Disease, Patient 1 (non-inflammed)


text: Dr. Marco Colonna, Path/Immuno, WUSM

text: live

text: Generic

text: missing

text: missing

text: Homo sapiens

text: Terminal ileum

text: Terminal ileum

text: CD-1813-5, Chron's Disease, Patient 1 (inflammed)


text: Andong National University

text: live

text: Microbe, viral or environmental

text: South Korea

characteristic: country

text: soil

text: Streptomyces goshikiensis

text: cell culture

characteristic: strain

text: Microbe sample from Streptomyces goshikiensis


text: Korea University

text: live

text: Generic

characteristic: cell line

text: embryonic stem cell

text: missing

text: WT

characteristic: genotype

text: missing

text: Homo sapiens

text: hESC H9, 24hr of convex curvature and dual SMAD inhibition after 48hr of dual SMAD inhibitionno, replicate 3

text: convex curvature and neuroepithelial differentiation


text: Korea University

text: live

text: Generic

text: embryonic stem cell

characteristic: cell type

text: missing

text: WT

text: missing

text: Homo sapiens

text: hESC H9, 24hr of convex curvature and dual SMAD inhibition after 48hr of dual SMAD inhibition, replicate 2


text: Korea University

text: live

text: Generic

text: embryonic stem cell

text: missing

text: WT

text: missing

text: Homo sapiens

text: hESC H9, 24hr of convex curvature and dual SMAD inhibition after 48hr of dual SMAD inhibition, replicate 1

characteristic: treatment


characteristic: External Id

text: Korea University

text: live

text: Generic

text: embryonic stem cell

text: missing

text: WT

text: missing

text: Homo sapiens

text: hESC H9, 24hr of no curvature and dual SMAD inhibition after 48hr of dual SMAD inhibition, replicate 3

text: neuroepithelial differentiation


text: Korea University

characteristic: INSDC center name

text: live

text: Generic

text: embryonic stem cell

text: missing

text: WT

text: missing

text: Homo sapiens

text: hESC H9, 24hr of no curvature and dual SMAD inhibition after 48hr of dual SMAD inhibition, replicate 2

text: neuroepithelial differentiation


text: Korea University

characteristic: INSDC last update

text: live

text: Generic

text: embryonic stem cell

text: missing

text: WT

text: missing

text: Homo sapiens

text: hESC H9, 24hr of no curvature and dual SMAD inhibition after 48hr of dual SMAD inhibition, replicate 1

text: neuroepithelial differentiation


text: Korea University

characteristic: INSDC first public

text: live

text: Generic

text: embryonic stem cell

text: missing

text: WT

text: missing

text: Homo sapiens

text: hESC H9, 24hr of concave curvature and dual SMAD inhibition after 48hr of dual SMAD inhibition, replicate 3

text: concave curvature and neuroepithelial differentiation


text: Korea University

characteristic: INSDC secondary accession

text: live

text: Generic

text: embryonic stem cell

text: missing

text: WT

text: missing

text: Homo sapiens

text: hESC H9, 24hr of concave curvature and dual SMAD inhibition after 48hr of dual SMAD inhibition, replicate 2


text: Korea University

text: live

characteristic: INSDC status

text: Generic

text: embryonic stem cell

text: missing

text: WT

text: missing

text: Homo sapiens

text: hESC H9, 24hr of concave curvature and dual SMAD inhibition after 48hr of dual SMAD inhibition, replicate 1


text: Shandong University (Qingdao Campus)

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: China

text: soil

text: Bacillus cereus

text: environmental samples

text: Microbe sample from Bacillus cereus


text: Shandong University (Qingdao Campus)

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: China

text: humans and animals

text: Lacticaseibacillus paracasei

text: environmental samples

text: Microbe sample from Lacticaseibacillus paracasei


text: Toulouse Institute for Infectious and Inflammatory Diseases (INFINITy)

text: live

text: Generic

characteristic: SRA accession

text: CD4 T cells

text: missing

text: missing

text: Mus musculus

text: CD4 T cells

text: Eomes-KO CD4 T cells (replicat 2) [CnR]


text: live

text: Generic

text: CD4 T cells

text: missing

text: missing

text: Mus musculus

characteristic: organism

text: CD4 T cells

text: Eomes-KO CD4 T cells (replicat 1) [CnR]


text: live

text: Generic

text: CD4 T cells

text: missing

text: Eomes-Ires-GFP

text: missing

text: Mus musculus

text: CD4 T cells

text: Eomes-GFP+ CD4 T cells (replicat 2) [CnR]

characteristic: title


text: live

text: Generic

text: CD4 T cells

text: missing

text: Eomes-Ires-GFP

text: missing

text: Mus musculus

text: CD4 T cells

text: Eomes-GFP+ CD4 T cells (replicat 1) [CnR]


text: live

text: Generic

text: CD4 T cells

text: missing

text: missing

text: Mus musculus

text: CD4 T cells

text: Eomes-KO CD4 T cells_T24 (replicat 4) [RNAseq]


text: live

text: Generic

text: CD4 T cells

text: missing

text: missing

text: Mus musculus

text: CD4 T cells

text: Eomes-KO CD4 T cells_T24 (replicat 3) [RNAseq]


text: live

text: Generic

text: CD4 T cells

text: missing

text: missing

text: Mus musculus

text: CD4 T cells

text: Eomes-KO CD4 T cells_T24 (replicat 2) [RNAseq]


text: live

text: Generic

text: CD4 T cells

text: missing

text: missing

text: Mus musculus

text: CD4 T cells

text: Eomes-KO CD4 T cells_T24 (replicat 1) [RNAseq]


text: live

text: Generic

text: CD4 T cells

text: missing

text: missing

text: Mus musculus

text: CD4 T cells

text: Eomes-WT CD4 T cells_T24 (replicat 4) [RNAseq]


text: live

text: Generic

text: CD4 T cells

text: missing

text: missing

text: Mus musculus

text: CD4 T cells

text: Eomes-WT CD4 T cells_T24 (replicat 3) [RNAseq]


text: live

text: Generic

text: CD4 T cells

text: missing

text: missing

text: Mus musculus

text: CD4 T cells

text: Eomes-WT CD4 T cells_T24 (replicat 2) [RNAseq]


text: live

text: Generic

text: CD4 T cells

text: missing

text: missing

text: Mus musculus

text: CD4 T cells

text: Eomes-WT CD4 T cells_T24 (replicat 1) [RNAseq]


text: live

text: Generic

text: CD4 T cells

text: missing

text: missing

text: Mus musculus

text: CD4 T cells

text: Eomes-KO CD4 T cells_T12 (replicat 3) [RNAseq]


text: live

text: Generic

text: CD4 T cells

text: missing

text: missing

text: Mus musculus

text: CD4 T cells

text: Eomes-KO CD4 T cells_T12 (replicat 2) [RNAseq]


text: live

text: Generic

text: CD4 T cells

text: missing

text: missing

text: Mus musculus

text: CD4 T cells

text: Eomes-KO CD4 T cells_T12 (replicat 1) [RNAseq]


text: live

text: Generic

text: CD4 T cells

text: missing

text: missing

text: Mus musculus

text: CD4 T cells

text: Eomes-WT CD4 T cells_T12 (replicat 3) [RNAseq]


text: live

text: Generic

text: CD4 T cells

text: missing

text: missing

text: Mus musculus

text: CD4 T cells

text: Eomes-WT CD4 T cells_T12 (replicat 2) [RNAseq]


text: live

text: Generic

text: CD4 T cells

text: missing

text: missing

text: Mus musculus

text: CD4 T cells

text: Eomes-WT CD4 T cells_T12 (replicat 1) [RNAseq]


text: Toulouse Institute for Infectious and Inflammatory Diseases (INFINITy)

text: live

text: Generic

text: CD4 T cells

text: missing

text: missing

text: Mus musculus

text: CD4 T cells

text: Eomes-KO CD4 T cells_T0 (replicat 3) [RNAseq]


text: live

text: Generic

text: CD4 T cells

text: missing

text: missing

text: Mus musculus

text: CD4 T cells

text: Eomes-KO CD4 T cells_T0 (replicat 2) [RNAseq]


text: live

text: Generic

text: CD4 T cells

text: missing

text: missing

text: Mus musculus

text: CD4 T cells

text: Eomes-KO CD4 T cells_T0 (replicat 1) [RNAseq]


text: live

text: Generic

text: CD4 T cells

text: missing

text: missing

text: Mus musculus

text: CD4 T cells

text: Eomes-WT CD4 T cells_T0 (replicat 3) [RNAseq]


text: live

text: Generic

text: CD4 T cells

text: missing

text: missing

text: Mus musculus

text: CD4 T cells

text: Eomes-WT CD4 T cells_T0 (replicat 2) [RNAseq]


text: live

text: Generic

text: CD4 T cells

text: missing

text: missing

text: Mus musculus

text: CD4 T cells

text: Eomes-WT CD4 T cells_T0 (replicat 1) [RNAseq]


text: live

text: Generic

text: CD4 T cells

text: missing

text: missing

text: Mus musculus

text: CD4 T cells

text: Eomes-KO CD4 T cells (replicat 2) [ATAC]


text: live

text: Generic

text: CD4 T cells

text: missing

text: missing

text: Mus musculus

text: CD4 T cells

text: Eomes-KO CD4 T cells (replicat 1) [ATAC]


text: live

text: Generic

text: CD4 T cells

text: missing

text: Eomes-Ires-GFP

text: missing

text: Mus musculus

text: CD4 T cells

text: Eomes-GFP+ CD4 T cells (replicat 3) [ATAC]


text: live

text: Generic

text: CD4 T cells

text: missing

text: Eomes-Ires-GFP

text: missing

text: Mus musculus

text: CD4 T cells

text: Eomes-GFP+ CD4 T cells (replicat 2) [ATAC]


text: live

text: Generic

text: CD4 T cells

text: missing

text: Eomes-Ires-GFP

text: missing

text: Mus musculus

text: CD4 T cells

text: Eomes-GFP+ CD4 T cells (replicat 1) [ATAC]


text: Koralov, Pathology, NYU Langone

text: live

text: Generic

text: PBMCs

text: missing

text: missing

text: TCRgd

characteristic: library type

text: Homo sapiens

text: PBMCs

text: PBMCs

characteristic: tissue

text: CV8, TCRgd


text: Koralov, Pathology, NYU Langone

text: live

text: Generic

text: PBMCs

text: missing

text: missing

text: TCRab

text: Homo sapiens

text: PBMCs

text: PBMCs

text: CV8, TCRab


text: Koralov, Pathology, NYU Langone

text: live

text: Generic

text: PBMCs

text: missing

text: missing

text: HTO

text: Homo sapiens

text: PBMCs

text: PBMCs

text: CV8, HTO


text: Koralov, Pathology, NYU Langone

text: live

text: Generic

text: PBMCs

text: missing

text: missing

text: GEX

text: Homo sapiens

text: PBMCs

text: PBMCs

text: CV8, GEX


text: Koralov, Pathology, NYU Langone

text: live

text: Generic

text: PBMCs

text: missing

text: missing

text: BCR

text: Homo sapiens

text: PBMCs

text: PBMCs

text: CV8, BCR


text: Koralov, Pathology, NYU Langone

text: live

text: Generic

text: PBMCs

text: missing

text: missing

text: ADT

text: Homo sapiens

text: PBMCs

text: PBMCs

text: CV8, ADT


text: Guizhou University

text: live

text: Plant

text: 5 years old

characteristic: age

text: Guizhou Province

characteristic: ecotype

text: China:Guizhou

text: Theaceae

text: Bud leaf

text: Plant sample from Theaceae


text: ETH-Zurich

text: live

text: Generic

text: missing

text: stress

characteristic: condition

text: MAT alpha his3{delta}1 leu2{delta}0 lys2{delta}0 ura3{delta}0 NAB2::NAB2-F450A-GFP-HISMX

characteristic: genotype

text: missing

text: Saccharomyces cerevisiae

text: NuclearExtract_replicate3_stress_Nab2-Interface mutant


characteristic: External Id

text: ETH-Zurich

text: live

text: Generic

text: missing

text: stress

text: MAT alpha his3{delta}1 leu2{delta}0 lys2{delta}0 ura3{delta}0 NAB2::NAB2-{delta}QQQP-{delta}RGG({delta}104-263)-SV40NLS-yEGFP-HISMX

text: missing

text: Saccharomyces cerevisiae

text: NuclearExtract_replicate3_stress_Nab2-IDRmutant


text: ETH-Zurich

characteristic: INSDC center name

text: live

text: Generic

text: missing

text: stress

text: MAT alpha his3{delta}1 leu2{delta}0 lys2{delta}0 ura3{delta}0 NAB2::NAB2-yEGFP-HISMX

text: missing

text: Saccharomyces cerevisiae

text: NuclearExtract_replicate3_stress_Nab2-wild type


text: ETH-Zurich

characteristic: INSDC last update

text: live

text: Generic

text: missing

text: stress

text: missing

text: Saccharomyces cerevisiae

text: NuclearExtract_replicate2_stress_Nab2-Interface mutant


text: ETH-Zurich

characteristic: INSDC first public

text: live

text: Generic

text: missing

text: stress

text: missing

text: Saccharomyces cerevisiae

text: NuclearExtract_replicate2_stress_Nab2-IDRmutant


text: ETH-Zurich

characteristic: INSDC secondary accession

text: live

text: Generic

text: missing

text: stress

text: missing

text: Saccharomyces cerevisiae

text: NuclearExtract_replicate2_stress_Nab2-wild type


text: ETH-Zurich

text: live

characteristic: INSDC status

text: Generic

text: missing

text: stress

text: missing

text: Saccharomyces cerevisiae

text: NuclearExtract_replicate1_stress_Nab2-Interface mutant


text: ETH-Zurich

text: live

text: Generic

characteristic: NCBI submission model

text: missing

text: stress

text: missing

text: Saccharomyces cerevisiae

text: NuclearExtract_replicate1_stress_Nab2-IDRmutant


text: ETH-Zurich

text: live

text: Generic

characteristic: NCBI submission package

text: missing

text: stress

text: missing

text: Saccharomyces cerevisiae

text: NuclearExtract_replicate1_stress_Nab2-wild type


text: ETH-Zurich

text: live

text: Generic

characteristic: SRA accession

text: missing

text: stress

text: missing

text: Saccharomyces cerevisiae

text: WholeCell_replicate2_stress_Nab2-Interface mutant


text: ETH-Zurich

text: live

text: Generic

text: missing

text: no stress

text: missing

text: Saccharomyces cerevisiae

characteristic: organism

text: WholeCell_replicate2_no-stress_Nab2-Interface mutant


text: ETH-Zurich

text: live

text: Generic

text: missing

text: stress

text: missing

text: Saccharomyces cerevisiae

text: WholeCell_replicate2_stress_Nab2-IDRmutant

characteristic: title


text: ETH-Zurich

text: live

text: Generic

text: missing

text: no stress

text: missing

text: Saccharomyces cerevisiae

text: WholeCell_replicate2_no-stress_Nab2-IDRmutant


text: ETH-Zurich

text: live

text: Generic

text: missing

text: stress

text: missing

text: Saccharomyces cerevisiae

text: WholeCell_replicate2_stress_Nab2-wild type


text: ETH-Zurich

text: live

text: Generic

text: missing

text: no stress

text: missing

text: Saccharomyces cerevisiae

text: WholeCell_replicate2_no-stress_Nab2-wild type


text: ETH-Zurich

text: live

text: Generic

text: missing

text: stress

text: MAT alpha his3{delta}1 leu2{delta}0 lys2{delta}0 ura3{delta}0 NAB2::NAB2-F450A-GFP-HISMX

text: missing

text: Saccharomyces cerevisiae

text: WholeCell_replicate1_stress_Nab2-Interface mutant


text: ETH-Zurich

text: live

text: Generic

text: missing

text: no stress

text: missing

text: Saccharomyces cerevisiae

text: WholeCell_replicate1_no-stress_Nab2-Interface mutant


text: ETH-Zurich

text: live

text: Generic

text: missing

text: stress

text: MAT alpha his3{delta}1 leu2{delta}0 lys2{delta}0 ura3{delta}0 NAB2::NAB2-{delta}QQQP-{delta}RGG({delta}104-263)-SV40NLS-yEGFP-HISMX

text: missing

text: Saccharomyces cerevisiae

text: WholeCell_replicate1_stress_Nab2-IDRmutant


text: ETH-Zurich

text: live

text: Generic

text: missing

text: no stress

text: missing

text: Saccharomyces cerevisiae

text: WholeCell_replicate1_no-stress_Nab2-IDRmutant


text: ETH-Zurich

text: live

text: Generic

text: missing

text: stress

text: MAT alpha his3{delta}1 leu2{delta}0 lys2{delta}0 ura3{delta}0 NAB2::NAB2-yEGFP-HISMX

text: missing

text: Saccharomyces cerevisiae

text: WholeCell_replicate1_stress_Nab2-wild type


text: ETH-Zurich

text: live

text: Generic

text: missing

text: no stress

text: missing

text: Saccharomyces cerevisiae

text: WholeCell_replicate1_no-stress_Nab2-wild type


text: Glass Lab, CMM, University of California, San Diego

text: live

text: Generic

text: Bone marrow-derived macrophages

characteristic: cell type

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

characteristic: time

text: ATAC_WT_KLA_RGFP966 rep2

text: KLA

characteristic: treatment


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: ATAC_WT_KLA_RGFP966 rep1

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: ATAC_WT_KLA rep2

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: ATAC_WT_KLA rep1

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: ATAC_WT_Veh rep2

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: ATAC_WT_Veh rep1

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: NCoR1 flox/flox

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: ATAC_NWT_Veh rep2

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: NCoR1 flox/flox

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: ATAC_NWT_Veh rep1

text: Veh


text: live

text: Generic

text: Bone marrow cell

characteristic: chip antibody

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow cell

text: Input_p300_WT_Day4 rep2


text: live

text: Generic

text: Bone marrow cell

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow cell

text: Input_p300_WT_Day4 rep1


text: live

text: Generic

text: Bone marrow cell

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow cell

text: Input_p300_WT_Day0 rep2


text: live

text: Generic

text: Bone marrow cell

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow cell

text: Input_p300_WT_Day0 rep1


text: live

text: Generic

text: Bone marrow cell

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow cell

text: p300_WT_Day4 rep2


text: live

text: Generic

text: Bone marrow cell

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow cell

text: p300_WT_Day4 rep1


text: live

text: Generic

text: Bone marrow cell

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow cell

text: p300_WT_Day0 rep2


text: live

text: Generic

text: Bone marrow cell

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow cell

text: p300_WT_Day0 rep1


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: Input_p300_WT_KLA rep2

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: Input_p300_WT_KLA rep1

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: Input_p300_WT_Veh rep2

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: Input_p300_WT_Veh rep1

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: p300_WT_KLA rep2

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: p300_WT_KLA rep1

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: p300_WT_Veh rep2

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: p300_WT_Veh rep1

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: Input_PGC1b_WT_DMSO_KLA rep2


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: Input_PGC1b_WT_DMSO_KLA rep1


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: Input_PGC1b_WT_DMSO_Veh rep2


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: Input_PGC1b_WT_DMSO_Veh rep1


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: PGC1b_WT_ERKi_KLA rep2


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: PGC1b_WT_ERKi_KLA rep1


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: PGC1b_WT_DMSO_KLA rep2


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: PGC1b_WT_DMSO_KLA rep1


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: PGC1b_WT_DMSO_Veh rep2


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: PGC1b_WT_DMSO_Veh rep1


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: Input_NCoR_PGC1b_WT_ERKi_KLA rep2


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: Input_NCoR_PGC1b_WT_ERKi_KLA rep1


text: live

text: Generic

text: Bone marrow-derived macrophages

text: NCoR

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: NCoR_WT_ERKi_KLA rep2


text: live

text: Generic

text: Bone marrow-derived macrophages

text: NCoR

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: NCoR_WT_ERKi_KLA rep1


text: live

text: Generic

text: Bone marrow cell

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow cell

text: Input_ERK1_WT_Day4 rep2


text: live

text: Generic

text: Bone marrow cell

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow cell

text: Input_ERK1_WT_Day4 rep1


text: live

text: Generic

text: Bone marrow cell

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow cell

text: Input_ERK1_WT_Day0 rep2


text: live

text: Generic

text: Bone marrow cell

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow cell

text: Input_ERK1_WT_Day0 rep1


text: live

text: Generic

text: Bone marrow cell

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow cell

text: ERK1_WT_Day4 rep2


text: live

text: Generic

text: Bone marrow cell

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow cell

text: ERK1_WT_Day4 rep1


text: live

text: Generic

text: Bone marrow cell

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow cell

text: ERK1_WT_Day0 rep2


text: live

text: Generic

text: Bone marrow cell

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow cell

text: ERK1_WT_Day0 rep1


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: PGC1b flox/flox, LysMCre

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: H3K27ac_Pgc1b_flox_Cre_KLA rep2

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: PGC1b flox/flox, LysMCre

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: H3K27ac_Pgc1b_flox_Cre_KLA rep1

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: PGC1b flox/flox

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: H3K27ac_Pgc1b_flox_KLA rep2

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: PGC1b flox/flox

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: H3K27ac_Pgc1b_flox_KLA rep1

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: PGC1b flox/flox, LysMCre

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: H3K27ac_Pgc1b_flox_Cre_Veh rep2

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: PGC1b flox/flox, LysMCre

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: H3K27ac_Pgc1b_flox_Cre_Veh rep1

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: PGC1b flox/flox

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: H3K27ac_Pgc1b_flox_Veh rep2

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: PGC1b flox/flox

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: H3K27ac_Pgc1b_flox_Veh rep1

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: H3K27ac_WT_RGFP966_KLA rep2


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: H3K27ac_WT_RGFP966_KLA rep1


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: H3K27ac_WT_DMSO_KLA rep2


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: H3K27ac_WT_DMSO_KLA rep1


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: H3K27ac_WT_DMSO_Veh rep2


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: H3K27ac_WT_DMSO_Veh rep1


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: ERK1_WT_KLA rep2

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: ERK1_WT_KLA rep1

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: ERK1_WT_Veh rep2

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: ERK1_WT_Veh rep1

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: Input_PGC1b_ERK1_WT_KLA rep2

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: Input_PGC1b_ERK1_WT_KLA rep1

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: Input_PGC1b_ERK1_WT_Veh rep2

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: Input_PGC1b_ERK1_WT_Veh rep1

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: PGC1b_WT_KLA rep2

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: PGC1b_WT_KLA rep1

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: PGC1b_WT_Veh rep2

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: PGC1b_WT_Veh rep1

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: PU.1_WT_KLA rep2

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: PU.1_WT_KLA rep1

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: PU.1_WT_Veh rep2

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: PU.1_WT_Veh rep1

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: p65_WT_KLA rep2

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: p65_WT_KLA rep1

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: p65_WT_Veh rep2

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: p65_WT_Veh rep1

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: Input_Fosl2_p65_PU.1_WT_KLA rep2

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: Input_Fosl2_p65_PU.1_WT_KLA rep1

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: Input_Fosl2_p65_PU.1_WT_Veh rep2

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: Input_Fosl2_p65_PU.1_WT_Veh rep1

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: Fosl2_WT_KLA rep2

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: Fosl2_WT_KLA rep1

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: Fosl2_WT_Veh rep2

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: Fosl2_WT_Veh rep1

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: HDAC3_WT_KLA rep2

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: HDAC3_WT_KLA rep1

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: HDAC3_WT_Veh rep2

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: HDAC3_WT_Veh rep1

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: Input_NCoR_HDAC3_WT_KLA rep2

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: Input_NCoR_HDAC3_WT_KLA rep1

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: Input_NCoR_HDAC3_WT_Veh rep2

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: Input_NCoR_HDAC3_WT_Veh rep1

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: NCoR

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: NCoR_WT_KLA rep2

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: NCoR

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: NCoR_WT_KLA rep1

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: NCoR

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: NCoR_WT_Veh rep2

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: NCoR

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: NCoR_WT_Veh rep1

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: NCoR flox/flox, LysMCre

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: H3K27ac_NKO_KLA rep2

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: NCoR flox/flox, LysMCre

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: H3K27ac_NKO_KLA rep1

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: NCoR flox/flox

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: H3K27ac_WT_KLA rep2

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: NCoR flox/flox

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: H3K27ac_WT_KLA rep1

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: NCoR flox/flox, LysMCre

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: H3K27ac_NKO_Veh rep2

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: NCoR flox/flox, LysMCre

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: H3K27ac_NKO_Veh rep1

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: NCoR flox/flox

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: H3K27ac_WT_Veh rep2

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: NCoR flox/flox

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: H3K27ac_WT_Veh rep1

text: Veh


Drosophila albomicans strains

text: Tokyo Metropolitan University

text: live

text: Model organism or animal

text: The primary goal of this study is to investigate the molecular and genetic mechanisms responsible for enhancing cold tolerance in Drosophila albomicans, a tropical fruit fly species that has successfully expanded its distribution from tropical to temperate regions. Comparing transcriptomic changes via cold acclimation between several strains of D. albomicans from various geographic locations within the East Asian temperate zone, we aim to identify the causative genes and pathways that underlie the species' adaptive responses to cold acclimation. Understanding these mechanisms is essential for unraveling the complex dynamics of cold adaptation and its role in driving the expansion of species into new, often colder, environments. This study's findings will not only contribute to our knowledge of the intricate interplay between gene expression and cold tolerance but also provide valuable insights into the broader context of species' responses to changing environmental conditions, with potential implications for climate change and species distribution dynamics

characteristic: description

text: Adult

text: Japan, China, Taiwan

characteristic: ecotype

text: missing: sample group

text: Drosophila albomicans

text: male

characteristic: sex

text: Whole body

characteristic: tissue

text: Evolutionary dynamics of gene expression in response to coldness in Drosophila albomicans


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

characteristic: genotype

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: TBK1i_KLA rep2


characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: TBK1i_KLA rep1


text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

characteristic: organism

text: Bone marrow-derived macrophages

text: DMSO_KLA rep2

characteristic: title

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

characteristic: cell type

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

characteristic: time

text: DMSO_KLA rep1

text: KLA

characteristic: treatment


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: DMSO_Veh rep2

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: DMSO_Veh rep1

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Pgc1b flox/flox, LysMCre

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: Pgc1b_flox_Cre_KLA rep2

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Pgc1b flox/flox, LysMCre

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: Pgc1b_flox_Cre_KLA rep1

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Pgc1b flox/flox

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: Pgc1b_flox_KLA rep2

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Pgc1b flox/flox

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: Pgc1b_flox_KLA rep1

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Pgc1b flox/flox, LysMCre

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: Pgc1b_flox_Cre_Veh rep2

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Pgc1b flox/flox, LysMCre

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: Pgc1b_flox_Cre_Veh rep1

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Pgc1b flox/flox

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: Pgc1b_flox_Veh rep2

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Pgc1b flox/flox

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: Pgc1b_flox_Veh rep1

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: RGFP966_KLA rep2


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: RGFP966_KLA rep1


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: KLA rep2

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: KLA rep1

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: Veh rep2

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: Wild type

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: Veh rep1

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: NCoR flox/flox, LysMCre

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: NKO_IL4 rep2


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: NCoR flox/flox, LysMCre

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: NKO_IL4 rep1


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: NCoR flox/flox

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: WT_IL4 rep2


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: NCoR flox/flox

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: WT_IL4 rep1


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: NCoR flox/flox, LysMCre

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: NKO_IFNb rep2

text: IFNb


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: NCoR flox/flox, LysMCre

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: NKO_IFNb rep1

text: IFNb


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: NCoR flox/flox

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: WT_IFNb rep2

text: IFNb


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: NCoR flox/flox

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: WT_IFNb rep1

text: IFNb


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: NCoR flox/flox, LysMCre

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: NKO_PolyIC rep2

text: PolyIC


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: NCoR flox/flox, LysMCre

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: NKO_PolyIC rep1

text: PolyIC


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: NCoR flox/flox

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: WT_PolyIC rep2

text: PolyIC


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: NCoR flox/flox

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: WT_PolyIC rep1

text: PolyIC


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: NCoR flox/flox, LysMCre

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: NKO_RANKL rep2

text: RANKL


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: NCoR flox/flox, LysMCre

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: NKO_RANKL rep1

text: RANKL


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: NCoR flox/flox

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: WT_RANKL rep2

text: RANKL


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: NCoR flox/flox

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: WT_RANKL rep1

text: RANKL


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: NCoR flox/flox, LysMCre

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: NKO_KLA rep2

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: NCoR flox/flox, LysMCre

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: NKO_KLA rep1

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: NCoR flox/flox

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: WT_KLA rep2

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: NCoR flox/flox

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: WT_KLA rep1

text: KLA


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: NCoR flox/flox, LysMCre

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: NKO_Veh rep2

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: NCoR flox/flox, LysMCre

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: NKO_Veh rep1

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: NCoR flox/flox

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: WT_Veh rep2

text: Veh


text: live

text: Generic

text: Bone marrow-derived macrophages

text: missing

text: NCoR flox/flox

text: missing

text: Mus musculus

text: Bone marrow-derived macrophages

text: WT_Veh rep1

text: Veh


text: Ruijin Hospital, Shanghai Jiao Tong University School of Medicine

text: live

text: Generic

text: Monocytes

text: missing

text: naïve AOSD

characteristic: disease state

text: missing

text: Homo sapiens

text: peripheral monocytes


text: live

text: Generic

text: Monocytes

text: missing

text: healthy control

text: missing

text: Homo sapiens

text: peripheral monocytes


text: Sun Yat-sen University Cancer Center

text: live

text: Generic

characteristic: cell line

text: Human hepatocellular carcinoma

text: missing

text: RFX6 knockout

text: missing

text: Homo sapiens

text: tumor cells

text: tumor cells

characteristic: tissue

text: Hep3B cells, sgRFX6_rep3


characteristic: External Id

text: Sun Yat-sen University Cancer Center

characteristic: INSDC center name

text: live

text: Generic

text: Human hepatocellular carcinoma

text: missing

text: RFX6 knockout

text: missing

text: Homo sapiens

text: tumor cells

text: tumor cells

text: Hep3B cells, sgRFX6_rep2


text: Sun Yat-sen University Cancer Center

characteristic: INSDC last update

text: live

text: Generic

text: Human hepatocellular carcinoma

text: missing

text: RFX6 knockout

characteristic: genotype

text: missing

text: Homo sapiens

text: tumor cells

text: tumor cells

text: Hep3B cells, sgRFX6_rep1


text: Sun Yat-sen University Cancer Center

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Generic

text: Human hepatocellular carcinoma

text: missing

text: WT

text: missing

text: Homo sapiens

text: tumor cells

text: tumor cells

text: Hep3B cells, sgControl_rep3


text: Sun Yat-sen University Cancer Center

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Human hepatocellular carcinoma

text: missing

text: WT

text: missing

text: Homo sapiens

text: tumor cells

text: tumor cells

text: Hep3B cells, sgControl_rep2


text: Sun Yat-sen University Cancer Center

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Human hepatocellular carcinoma

text: missing

text: WT

text: missing

text: Homo sapiens

text: tumor cells

text: tumor cells

text: Hep3B cells, sgControl_rep1


text: Sun Yat-sen University Cancer Center

text: live

text: Generic

text: Human hepatocellular carcinoma

text: missing

text: missing

text: Homo sapiens

characteristic: organism

text: tumor cells

text: tumor cells

text: MHCC-97H, input

characteristic: title


text: Sun Yat-sen University Cancer Center

text: live

text: Generic

text: Human hepatocellular carcinoma

characteristic: cell type

text: missing

text: missing

text: Homo sapiens

text: tumor cells

text: tumor cells

text: MHCC-97H, HA-RFX6, ChIP


text: Cancer Research Center of Lyon

text: live

text: Generic

text: male

characteristic: Sex

characteristic: age in_years

text: RMS2 cell line

text: Rhabdomyosarcoma

text: missing

characteristic: culture type

text: Relapse/metastatic

text: fresh

characteristic: fresh/cryopreserved

text: missing

text: Embryonal

characteristic: histological subtype

text: DMEM

characteristic: medium

text: Homo sapiens

characteristic: passage number

text: Ischioanal

characteristic: primary tumor_location

text: Lung

characteristic: sample location

text: DMEM_2D_P19 [Exome panel]


characteristic: External Id

text: Cancer Research Center of Lyon

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: male

text: RMS2 cell line

characteristic: cell line

text: Rhabdomyosarcoma

text: missing

text: Relapse/metastatic

characteristic: disease state

text: fresh

text: missing

text: Embryonal

text: DMEM

text: Homo sapiens

text: Ischioanal

text: Lung

characteristic: tissue

text: DMEM_2D_P16 [Exome panel]


text: Cancer Research Center of Lyon

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: male

characteristic: Sex

text: RMS1 organoid

text: Rhabdomyosarcoma

characteristic: cell type

text: missing

text: Relapse

text: fresh

text: missing

text: Embryonal

text: Homo sapiens

characteristic: organism

text: Parameningeal

text: RMS1_O_P17 [Exome panel]

characteristic: title


text: Cancer Research Center of Lyon

text: live

text: Generic

text: male

characteristic: age in_years

text: Rhabdomyosarcoma

text: missing

characteristic: culture type

text: Relapse

characteristic: fresh/cryopreserved

text: missing

text: Embryonal

characteristic: histological subtype

characteristic: medium

text: Homo sapiens

characteristic: passage number

characteristic: primary tumor_location

text: Parameningeal

characteristic: sample location

text: RMS1 tissue

text: RMS1 tissue

text: RMS1_T [Exome panel]


characteristic: External Id

text: Cancer Research Center of Lyon

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: male

text: RMS1 organoid

characteristic: cell line

text: Rhabdomyosarcoma

text: missing

text: Relapse

characteristic: disease state

text: cryopreserved

text: missing

text: Embryonal

text: Homo sapiens

text: Parameningeal

characteristic: tissue

text: RMS1_O_P23* [Exome panel]


text: Cancer Research Center of Lyon

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: male

characteristic: Sex

text: RMS1 organoid

text: Rhabdomyosarcoma

characteristic: cell type

text: missing

text: Relapse

text: cryopreserved

text: missing

text: Embryonal

text: Homo sapiens

characteristic: organism

text: Parameningeal

text: RMS1_O_P22* [Exome panel]

characteristic: title


text: Cancer Research Center of Lyon

text: live

text: Generic

text: male

characteristic: age in_years

text: RMS1 organoid

text: Rhabdomyosarcoma

text: missing

characteristic: culture type

text: Relapse

text: cryopreserved

characteristic: fresh/cryopreserved

text: missing

text: Embryonal

characteristic: histological subtype

characteristic: medium

text: Homo sapiens

characteristic: passage number

characteristic: primary tumor_location

text: Parameningeal

characteristic: sample location

text: RMS1_O_P6* [Exome panel]


characteristic: External Id

text: Cancer Research Center of Lyon

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: male

text: RMS1 organoid

characteristic: cell line

text: Rhabdomyosarcoma

text: missing

text: Relapse

characteristic: disease state

text: fresh

text: missing

text: Embryonal

text: Homo sapiens

text: Parameningeal

characteristic: tissue

text: RMS1_O_P13 [Exome panel]


text: Cancer Research Center of Lyon

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: male

characteristic: Sex

text: RMS2 organoid

text: Rhabdomyosarcoma

characteristic: cell type

text: missing

text: Relapse/metastatic

text: fresh

text: missing

text: Embryonal

text: Homo sapiens

characteristic: organism

text: Ischioanal

text: Lung

text: RMS2_O_P7 [Exome panel]

characteristic: title


text: Cancer Research Center of Lyon

text: live

text: Generic

text: male

characteristic: age in_years

text: RMS2 organoid

text: Rhabdomyosarcoma

text: missing

characteristic: culture type

text: Relapse/metastatic

text: fresh

characteristic: fresh/cryopreserved

text: missing

text: Embryonal

characteristic: histological subtype

characteristic: medium

text: Homo sapiens

characteristic: passage number

text: Ischioanal

characteristic: primary tumor_location

text: Lung

characteristic: sample location

text: RMS2_O_P6 [Exome panel]


characteristic: External Id

text: Cancer Research Center of Lyon

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: male

text: RMS2 organoid

characteristic: cell line

text: Rhabdomyosarcoma

text: missing

text: Relapse/metastatic

characteristic: disease state

text: cryopreserved

text: missing

text: Embryonal

text: Homo sapiens

text: Ischioanal

text: Lung

characteristic: tissue

text: RMS2_O_P7* [Exome panel]


text: Cancer Research Center of Lyon

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: male

characteristic: Sex

text: RMS2 organoid

text: Rhabdomyosarcoma

characteristic: cell type

text: missing

text: Relapse/metastatic

text: cryopreserved

text: missing

text: Embryonal

text: Homo sapiens

characteristic: organism

text: Ischioanal

text: Lung

text: RMS2_O_P8* [Exome panel]

characteristic: title


text: Cancer Research Center of Lyon

text: live

text: Generic

text: male

characteristic: age in_years

text: RMS2 organoid

text: Rhabdomyosarcoma

text: missing

characteristic: culture type

text: Relapse/metastatic

text: cryopreserved

characteristic: fresh/cryopreserved

text: missing

text: Embryonal

characteristic: histological subtype

characteristic: medium

text: Homo sapiens

characteristic: passage number

text: Ischioanal

characteristic: primary tumor_location

text: Lung

characteristic: sample location

text: RMS2_O_P29* [Exome panel]


characteristic: External Id

text: Cancer Research Center of Lyon

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: male

characteristic: cell line

text: Rhabdomyosarcoma

text: missing

text: Relapse/metastatic

characteristic: disease state

text: missing

text: Embryonal

text: Homo sapiens

text: Ischioanal

text: Lung

text: RMS2 tissue

text: RMS2 tissue

characteristic: tissue

text: RMS2_T [Exome panel]


text: Cancer Research Center of Lyon

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: male

characteristic: Sex

text: RMS2 organoid

text: Rhabdomyosarcoma

characteristic: cell type

text: missing

text: Relapse/metastatic

text: cryopreserved

text: missing

text: Embryonal

text: Homo sapiens

characteristic: organism

text: Ischioanal

text: Lung

text: RMS2_O_P28* [Exome panel]

characteristic: title


text: Cancer Research Center of Lyon

text: live

text: Generic

text: male

characteristic: age in_years

text: RMS2 cell line

text: Rhabdomyosarcoma

text: missing

characteristic: culture type

text: Relapse/metastatic

text: fresh

characteristic: fresh/cryopreserved

text: missing

text: Embryonal

characteristic: histological subtype

text: DMEM

characteristic: medium

text: Homo sapiens

characteristic: passage number

text: Ischioanal

characteristic: primary tumor_location

text: Lung

characteristic: sample location

text: DMEM_2D_P5 [RNAseq]


characteristic: External Id

text: Cancer Research Center of Lyon

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: male

text: RMS2 cell line

characteristic: cell line

text: Rhabdomyosarcoma

text: missing

text: Relapse/metastatic

characteristic: disease state

text: fresh

text: missing

text: Embryonal

text: DMEM

text: Homo sapiens

text: Ischioanal

text: Lung

characteristic: tissue

text: DMEM_2D_P3 [RNAseq]


text: Cancer Research Center of Lyon

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: male

characteristic: Sex

text: RMS2 organoid

text: Rhabdomyosarcoma

characteristic: cell type

text: missing

text: Relapse/metastatic

text: fresh

text: missing

text: Embryonal

text: Homo sapiens

characteristic: organism

text: Ischioanal

text: Lung

text: RMS2_O_P3 [RNAseq]

characteristic: title


text: Cancer Research Center of Lyon

text: live

text: Generic

text: male

characteristic: age in_years

text: RMS2 organoid

text: Rhabdomyosarcoma

text: missing

characteristic: culture type

text: Relapse/metastatic

text: cryopreserved

characteristic: fresh/cryopreserved

text: missing

text: Embryonal

characteristic: histological subtype

characteristic: medium

text: Homo sapiens

characteristic: passage number

text: Ischioanal

characteristic: primary tumor_location

text: Lung

characteristic: sample location

text: RMS2_O_P14* [RNAseq]


characteristic: External Id

text: Cancer Research Center of Lyon

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: male

text: RMS2 organoid

characteristic: cell line

text: Rhabdomyosarcoma

text: missing

text: Relapse/metastatic

characteristic: disease state

text: cryopreserved

text: missing

text: Embryonal

text: Homo sapiens

text: Ischioanal

text: Lung

characteristic: tissue

text: RMS2_O_P13* [RNAseq]


text: Cancer Research Center of Lyon

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: male

characteristic: Sex

text: RMS2 organoid

text: Rhabdomyosarcoma

characteristic: cell type

text: missing

text: Relapse/metastatic

text: fresh

text: missing

text: Embryonal

text: Homo sapiens

characteristic: organism

text: Ischioanal

text: Lung

text: RMS2_O_P2 [RNAseq]

characteristic: title


text: Cancer Research Center of Lyon

text: live

text: Generic

text: male

characteristic: age in_years

text: RMS2 organoid

text: Rhabdomyosarcoma

text: missing

characteristic: culture type

text: Relapse/metastatic

text: cryopreserved

characteristic: fresh/cryopreserved

text: missing

text: Embryonal

characteristic: histological subtype

characteristic: medium

text: Homo sapiens

characteristic: passage number

text: Ischioanal

characteristic: primary tumor_location

text: Lung

characteristic: sample location

text: RMS2_O_P29* [RNAseq]


characteristic: External Id

text: Cancer Research Center of Lyon

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: male

text: RMS2 organoid

characteristic: cell line

text: Rhabdomyosarcoma

text: missing

text: Relapse/metastatic

characteristic: disease state

text: cryopreserved

text: missing

text: Embryonal

text: Homo sapiens

text: Ischioanal

text: Lung

characteristic: tissue

text: RMS2_O_P28* [RNAseq]


text: Cancer Research Center of Lyon

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: male

characteristic: Sex

text: RMS2 organoid

text: Rhabdomyosarcoma

characteristic: cell type

text: missing

text: Relapse/metastatic

text: fresh

text: missing

text: Embryonal

text: Homo sapiens

characteristic: organism

text: Ischioanal

text: Lung

text: RMS2_O_P17 [RNAseq]

characteristic: title


text: Cancer Research Center of Lyon

text: live

text: Generic

text: male

characteristic: age in_years

text: RMS2 organoid

text: Rhabdomyosarcoma

text: missing

characteristic: culture type

text: Relapse/metastatic

text: fresh

characteristic: fresh/cryopreserved

text: missing

text: Embryonal

characteristic: histological subtype

characteristic: medium

text: Homo sapiens

characteristic: passage number

text: Ischioanal

characteristic: primary tumor_location

text: Lung

characteristic: sample location

text: RMS2_O_P15 [RNAseq]


characteristic: External Id

text: Cancer Research Center of Lyon

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: male

characteristic: cell line

text: Rhabdomyosarcoma

text: missing

text: Relapse/metastatic

characteristic: disease state

text: missing

text: Embryonal

text: Homo sapiens

text: Ischioanal

text: Lung

text: RMS2 tissue

text: RMS2 tissue

characteristic: tissue

text: RMS2_T2 [RNAseq]


text: Cancer Research Center of Lyon

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: male

characteristic: Sex

text: Rhabdomyosarcoma

characteristic: cell type

text: missing

text: Relapse/metastatic

text: missing

text: Embryonal

text: Homo sapiens

characteristic: organism

text: Ischioanal

text: Lung

text: RMS2 tissue

text: RMS2 tissue

text: RMS2_T1 [RNAseq]

characteristic: title


text: Cancer Research Center of Lyon

text: live

text: Generic

text: male

characteristic: age in_years

text: RMS1 organoid

text: Rhabdomyosarcoma

text: missing

characteristic: culture type

text: Relapse

text: cryopreserved

characteristic: fresh/cryopreserved

text: missing

text: Embryonal

characteristic: histological subtype

characteristic: medium

text: Homo sapiens

characteristic: passage number

characteristic: primary tumor_location

text: Parameningeal

characteristic: sample location

text: RMS1_O_P12* [RNAseq]


characteristic: External Id

text: Cancer Research Center of Lyon

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: male

text: RMS1 organoid

characteristic: cell line

text: Rhabdomyosarcoma

text: missing

text: Relapse

characteristic: disease state

text: cryopreserved

text: missing

text: Embryonal

text: Homo sapiens

text: Parameningeal

characteristic: tissue

text: RMS1_O_P13* [RNAseq]


text: Cancer Research Center of Lyon

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: male

characteristic: Sex

text: RMS1 organoid

text: Rhabdomyosarcoma

characteristic: cell type

text: missing

text: Relapse

text: cryopreserved

text: missing

text: Embryonal

text: Homo sapiens

characteristic: organism

text: Parameningeal

text: RMS1_O_P22* [RNAseq]

characteristic: title


text: Cancer Research Center of Lyon

text: live

text: Generic

text: male

characteristic: age in_years

text: RMS1 organoid

text: Rhabdomyosarcoma

text: missing

characteristic: culture type

text: Relapse

text: cryopreserved

characteristic: fresh/cryopreserved

text: missing

text: Embryonal

characteristic: histological subtype

characteristic: medium

text: Homo sapiens

characteristic: passage number

characteristic: primary tumor_location

text: Parameningeal

characteristic: sample location

text: RMS1_O_P23* [RNAseq]


characteristic: External Id

text: Cancer Research Center of Lyon

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: male

text: RMS1 organoid

characteristic: cell line

text: Rhabdomyosarcoma

text: missing

text: Relapse

characteristic: disease state

text: cryopreserved

text: missing

text: Embryonal

text: Homo sapiens

text: Parameningeal

characteristic: tissue

text: RMS1_O_P8* [RNAseq]


text: Cancer Research Center of Lyon

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: male

characteristic: Sex

text: RMS1 cell line

text: Rhabdomyosarcoma

characteristic: cell type

text: missing

text: Relapse

text: cryopreserved

text: missing

text: Embryonal

text: Homo sapiens

characteristic: organism

text: Parameningeal

text: M3_2D_P12* [RNAseq]

characteristic: title


text: Cancer Research Center of Lyon

text: live

text: Generic

text: male

characteristic: age in_years

text: RMS1 cell line

text: Rhabdomyosarcoma

text: missing

characteristic: culture type

text: Relapse

text: cryopreserved

characteristic: fresh/cryopreserved

text: missing

text: Embryonal

characteristic: histological subtype

characteristic: medium

text: Homo sapiens

characteristic: passage number

characteristic: primary tumor_location

text: Parameningeal

characteristic: sample location

text: M3_2D_P13* [RNAseq]


characteristic: External Id

text: Cancer Research Center of Lyon

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: male

text: RMS1 organoid

characteristic: cell line

text: Rhabdomyosarcoma

text: missing

text: Relapse

characteristic: disease state

text: fresh

text: missing

text: Embryonal

text: Homo sapiens

text: Parameningeal

characteristic: tissue

text: RMS1_O_P6 [RNAseq]


text: Cancer Research Center of Lyon

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: male

characteristic: Sex

text: RMS1 organoid

text: Rhabdomyosarcoma

characteristic: cell type

text: missing

text: Relapse

text: fresh

text: missing

text: Embryonal

text: Homo sapiens

characteristic: organism

text: Parameningeal

text: RMS1_O_P8 [RNAseq]

characteristic: title


text: Cancer Research Center of Lyon

text: live

text: Generic

text: male

characteristic: age in_years

text: RMS1 organoid

text: Rhabdomyosarcoma

text: missing

characteristic: culture type

text: Relapse

text: fresh

characteristic: fresh/cryopreserved

text: missing

text: Embryonal

characteristic: histological subtype

characteristic: medium

text: Homo sapiens

characteristic: passage number

characteristic: primary tumor_location

text: Parameningeal

characteristic: sample location

text: RMS1_O_P15 [RNAseq]


characteristic: External Id

text: Cancer Research Center of Lyon

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: male

text: RMS1 organoid

characteristic: cell line

text: Rhabdomyosarcoma

text: missing

text: Relapse

characteristic: disease state

text: fresh

text: missing

text: Embryonal

text: Homo sapiens

text: Parameningeal

characteristic: tissue

text: RMS1_O_P17 [RNAseq]


text: Cancer Research Center of Lyon

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: male

characteristic: Sex

text: Rhabdomyosarcoma

characteristic: cell type

text: missing

text: Relapse

text: missing

text: Embryonal

text: Homo sapiens

characteristic: organism

text: Parameningeal

text: RMS1 tissue

text: RMS1 tissue

text: RMS1_T2 [RNAseq]

characteristic: title


text: Cancer Research Center of Lyon

text: live

text: Generic

text: male

characteristic: age in_years

text: Rhabdomyosarcoma

text: missing

characteristic: culture type

text: Relapse

characteristic: fresh/cryopreserved

text: missing

text: Embryonal

characteristic: histological subtype

characteristic: medium

text: Homo sapiens

characteristic: passage number

characteristic: primary tumor_location

text: Parameningeal

characteristic: sample location

text: RMS1 tissue

text: RMS1 tissue

text: RMS1_T1 [RNAseq]


characteristic: External Id

text: Cancer Research Center of Lyon

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: male

text: RMS1 organoid

characteristic: cell line

text: Rhabdomyosarcoma

text: missing

text: Relapse

characteristic: disease state

text: cryopreserved

text: missing

text: Embryonal

text: Homo sapiens

text: Parameningeal

characteristic: tissue

text: M2_3D_P6* [RNAseq]


text: Cancer Research Center of Lyon

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: male

characteristic: Sex

text: RMS1 organoid

text: Rhabdomyosarcoma

characteristic: cell type

text: missing

text: Relapse

text: cryopreserved

text: missing

text: Embryonal

text: Homo sapiens

characteristic: organism

text: Parameningeal

text: M2_3D_P5* [RNAseq]

characteristic: title


text: Cancer Research Center of Lyon

text: live

text: Generic

text: male

characteristic: age in_years

text: RMS2 cell line

text: Rhabdomyosarcoma

text: missing

characteristic: culture type

text: Relapse/metastatic

text: fresh

characteristic: fresh/cryopreserved

text: missing

text: Embryonal

characteristic: histological subtype

text: DMEM

characteristic: medium

text: Homo sapiens

characteristic: passage number

text: Ischioanal

characteristic: primary tumor_location

text: Lung

characteristic: sample location

text: DMEM_2D_P14 [RNAseq]


characteristic: External Id

text: Cancer Research Center of Lyon

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: male

text: RMS2 cell line

characteristic: cell line

text: Rhabdomyosarcoma

text: missing

text: Relapse/metastatic

characteristic: disease state

text: fresh

text: missing

text: Embryonal

text: DMEM

text: Homo sapiens

text: Ischioanal

text: Lung

characteristic: tissue

text: DMEM_2D_P15 [RNAseq]


text: Cancer Research Center of Lyon

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: male

characteristic: Sex

text: RMS1 organoid

text: Rhabdomyosarcoma

characteristic: cell type

text: missing

text: Relapse

text: fresh

text: missing

text: Embryonal

text: Homo sapiens

characteristic: organism

text: Parameningeal

text: RMS1_O_P14 [scRNAseq]

characteristic: title


text: Cancer Research Center of Lyon

text: live

text: Generic

text: male

characteristic: age in_years

text: RMS1 organoid

text: Rhabdomyosarcoma

text: missing

characteristic: culture type

text: Relapse

text: fresh

characteristic: fresh/cryopreserved

text: missing

text: Embryonal

characteristic: histological subtype

characteristic: medium

text: Homo sapiens

characteristic: passage number

characteristic: primary tumor_location

text: Parameningeal

characteristic: sample location

text: RMS1_O_P13 [scRNAseq]


characteristic: External Id

text: Israel Oceanographic and Limnological Research

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: MIMAG.water

characteristic: depth

text: This BioSample is a metagenomic assembly obtained from the brine metagenome BioSamples: SAMN38319108, SAMN38319109, SAMN38319110, SAMN38319111, SAMN38319112, SAMN38319113, SAMN38319114, SAMN38319115, SAMN38319116, SAMN38319117

characteristic: derived-from

characteristic: description

characteristic: environmental-sample

text: Israel

characteristic: isolate

text: brine pool

text: 32.22 N 34.18 E

text: brine metagenome

characteristic: metagenome-source

characteristic: metagenomic

text: Pseudomonadota bacterium

text: metagenomic assembly

characteristic: sample-type

text: MIMAG Metagenome-assembled Genome sample from Pseudomonadota bacterium


text: live

characteristic: INSDC status

text: MIMAG.water

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Israel

text: brine pool

text: 32.22 N 34.18 E

text: brine metagenome

text: Candidatus Omnitrophota bacterium

characteristic: organism

text: metagenomic assembly

text: MIMAG Metagenome-assembled Genome sample from Candidatus Omnitrophota bacterium

characteristic: title