text: Bioinformatics, UNC Charlotte

text: live

text: Generic

text: heat shock in MOPS

text: HS 4h

text: HS 4h


status: PUBLIC

characteristic: External Id

text: Bioinformatics, UNC Charlotte

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: carbon-starvation treatment

tag: attribute

characteristic: condition

text: Escherichia coli str. K-12 substr. MG1655

characteristic: organism

text: M-C 1h

characteristic: strain

characteristic: substrain

text: M-C 1h

characteristic: title


text: Bioinformatics, UNC Charlotte

text: live

text: Generic

text: LB medium OD600=3.0

text: LB 3.0

text: LB 3.0


Actinobacillus muris

text: University of Copenhagen

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: USA

characteristic: geo loc name

text: mouse

characteristic: host

text: uterus

characteristic: isolation source

text: Muribacter muris

text: cell culture

characteristic: sample type

text: Microbe sample from Muribacter muris

text: type strain of Actinobacillus muris

characteristic: type-material


Small RNa of Porphyromonas gingivalis

characteristic: External Id

text: Kyungpook National University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Korea: Daegu

text: Homo sapiens

text: Se-Chul Kim

characteristic: isolate

text: ATCC

text: Porphyromonas gingivalis ATCC 33277

text: cell culture

text: ATCC 33277

text: Microbe sample from Porphyromonas gingivalis ATCC 33277

text: type strain of Bacteroides gingivalis


text: University of La Rochelle

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Specimen A6, mitogenome Acc number KM373201

characteristic: description

characteristic: genotype

text: France: Aytre

text: 46.126 N 1.1306 W

characteristic: lat lon

text: Limecola balthica rubra

text: ethanol

text: foot tissue

characteristic: tissue

text: Foot tissue from field-collected specimen


text: University of La Rochelle

text: live

text: Model organism or animal

text: Specimen A10, mitogenome Acc number KM373200

text: France: Aytre

characteristic: geo loc name

text: 46.126 N 1.1306 W

text: Limecola balthica rubra

characteristic: organism

text: ethanol

text: foot tissue

characteristic: title


characteristic: External Id

text: University of La Rochelle

text: live

text: Model organism or animal

text: Specimen M12, mitogenome Acc number KM373202

text: France: Mont-Saint-Michel

text: 48.438 N 1.5153 W

text: Limecola balthica rubra

text: ethanol

text: foot tissue


text: University of La Rochelle

characteristic: INSDC center name

text: live

text: Model organism or animal

text: Specimen F17, mitogenome Acc number KM373205

text: Finland: Tvarminne

text: 59.4883 N 21.2051 E

text: Macoma balthica

text: ethanol

text: balthica

characteristic: strain

text: foot tissue


text: University of La Rochelle

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Model organism or animal

text: Specimen W4, mitogenome Acc number KM373203

text: Netherlands: Balgzand

text: 52.9301 N 4.7953 E

text: Limecola balthica rubra

text: ethanol

text: foot tissue


text: University of La Rochelle

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

text: Specimen W20, mitogenome Acc number KM373204

text: Netherlands: Balgzand

text: 52.9301 N 4.7953 E

text: Limecola balthica rubra

text: ethanol

text: foot tissue


DSM 12510

text: Austrian Institute of Technology

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: culture-collection

text: Keywords: GSC:MIxS;MIGS:6.0

text: Soil

text: DOI: 10.1099/00207713-48-3-973

text: Microbacterium terrae

text: DOI: 10.1099/00207713-48-3-973

text: DSM 12510

text: MIGS Cultured Bacterial/Archaeal sample from Microbacterium terrae

text: type strain of Microbacterium ketosireducens

characteristic: type material


DSM 8608

text: Austrian Institute of Technology

text: live

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Keywords: GSC:MIxS;MIGS:6.0

text: Soil

text: DOI: 10.1099/00207713-48-3-739

text: Microbacterium trichothecenolyticum

text: DOI: 10.1099/00207713-48-3-739

text: DSM 8608

text: MIGS Cultured Bacterial/Archaeal sample from Microbacterium trichothecenolyticum

text: type strain of Aureobacterium trichothecenolyticum

characteristic: type-material


text: Inner Mongolia Agricultural University

text: live

text: Microbe, viral or environmental

text: chicken

characteristic: host

text: ceca

characteristic: isolation source

text: whole organism

characteristic: sample type

text: DSM 20682

text: Microbe sample from Enterococcus cecorum DSM 20682 = ATCC 43198

text: type strain of Streptococcus cecorum


text: Inner Mongolia Agricultural University

text: live

text: Microbe, viral or environmental

text: chicken

text: intestine

text: Enterococcus gallinarum

characteristic: organism

text: whole organism

text: DSM 24841

text: Microbe sample from Enterococcus gallinarum

characteristic: title

text: type strain of Streptococcus gallinarum


name: Methanobrevibacter arboriphilicus DSM 1125

characteristic: External Id

text: Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

characteristic: culture collection

text: Methanobrevibacter arboriphilus strain DH1 has been isolated from wetwood enrichment cultures and is an autotrophic methanogen. The genome of strain DH1 (DSM 1125) will be used for comparative analysis with human intestinal and rumen methanogen genomes.

characteristic: description

text: USA: Madison

characteristic: geo loc name

text: wetwood

text: Microbe sample from Methanobrevibacter arboriphilus JCM 13429 = DSM 1125

text: type strain of Methanobacterium arbophilicum


name: Euphilomedes carcharodonta embryos 454 transcriptome

text: University of South Carolina

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Invertebrate

characteristic: collection date

text: 1 m

characteristic: depth

text: mRNA was extracted from tissue using Trizol. cDNA was prepared using the SMARTer cDNA synthesis kit from Clontech. Amplified cDNA was purified using phenol:chloroform:isoamyl (25:24:1 v/v/v). Sequencing was performed using the Roche 454 platform.

text: Embryos

characteristic: dev stage

text: USA: Half Moon Bay, CA

text: Whole embryos from adults captured by hand net

characteristic: isolate

text: USA: Half Moon Bay, CA

text: 37.29 N 122.29 W

characteristic: lat lon

text: Euphilomedes carcharodonta

text: pooled male and female

characteristic: sex

text: Whole embryos

characteristic: tissue

text: Invertebrate sample from Euphilomedes carcharodonta


Hydrogenibacillus schlegelii

text: California Institute of Technology

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Switzerland: Neufchatel

text: eutrophic lake Le Loclat

characteristic: isolation source

text: Hydrogenibacillus schlegelii

characteristic: organism

text: Isolate

characteristic: sample type

text: MA 48

characteristic: strain

text: Microbe sample from Hydrogenibacillus schlegelii

characteristic: title

text: type strain of Bacillus schlegelii

characteristic: type-material


SALT PAN-2007

characteristic: External Id

text: Directorate of Groundnut Research (Indian Council of Agricultural Research)

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: Dr. K. K. Pal

characteristic: collected by

text: India: Rann of Kutch, Gujarat

characteristic: geo loc name

text: Dr. K. K. Pal

characteristic: identified by

text: salt crystallizer pond

text: Haloarcula argentinensis

text: Single cell

text: Microbe sample from Haloarcula argentinensis


text: DSMZ German Collection of Microorganisms and Cell Cultures, Microbiology

text: live

text: Generic

characteristic: NCBI submission model

text: AOQA

characteristic: common name

text: Spain

characteristic: country

characteristic: culture-collection

text: seawater from larval cultures of the scallop Pecten maximus

characteristic: isolation-source

text: Phaeobacter gallaeciensis DSM 26640

text: DSM 26640

text: Sample from Phaeobacter gallaeciensis DSM 26640

text: type strain of Roseobacter gallaeciensis


name: Magnetospirillum magnetotacticum Strain MS-1

text: California Institute of Technology

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: culture collection

text: USA: Cedar Swamp, Massachusetts

text: water

characteristic: isolation source

text: Paramagnetospirillum magnetotacticum MS-1

characteristic: organism

text: cell culture

characteristic: sample type

text: Magnetospirillum magnetotacticum MS-1

text: type strain of Aquaspirillum magnetotacticum


ATCC 51760

characteristic: External Id

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.cl

text: FDA-GCSL

text: Norway

text: herring pyloric ceca

text: Photobacterium iliopiscarium

text: ATCC 51760

characteristic: strain

text: Pathogen: clinical or host-associated sample from Photobacterium iliopiscarium

characteristic: title

text: type strain of Vibrio iliopiscarius

characteristic: type-material


Acidithrix ferrooxidans Strain Py-F3

text: Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: Acidithrix ferrooxidans Strain Py-F3 has been isolated from a stream discharging acidic water from an abandoned copper mine in North Wales. Based on the similarity (91-93%) of its 16S rRNA gene sequence to those of the type species of the currently recognised genera of acidophilic iron oxidising Actinobacteria (Acidimicrobium, Ferrimicrobium, Ferrithrix), strain Py-F3 has been assigned to the new genus Acidithrix representing it as type species.

characteristic: description

text: United Kingdom: Wales

characteristic: geo loc name

text: mine water

text: Acidithrix ferrooxidans

text: organism

text: Microbe sample from Acidithrix ferrooxidans

text: type strain of Acidithrix ferrooxidans

characteristic: type material


MchloDSM

text: Uppsala University

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

characteristic: SRA accession

text: Mycobacterium chlorophenolicum is soil-living mycobacteria and has the potential to degrade polychlorinated phenol compounds and its derivatives. As a result this bacterium is widely used in bio-remediation of contaminated soils. It is fast growing mesophilic Mycobacterium spp. and optimum growth temperature 28C.

text: soil

text: Mycolicibacterium chlorophenolicum

text: cell culture

text: DSM 43826

text: Microbe sample from Mycolicibacterium chlorophenolicum

text: type strain of Rhodococcus chlorophenolicus


Catellatospora ferruginea NRRL B-16430

text: University of Illinois at Urbana-Champaign

text: live

text: Microbe, viral or environmental

characteristic: culture collection

text: Asanoa ferruginea

text: whole organism

text: NRRL B-16430

text: Microbe sample from Asanoa ferruginea

text: type strain of Catellatospora ferruginea


Hschlegelii

text: Harvard Medical School

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: Switzerland: lake near Neuchatel

text: surface layer of sediment from a small eutrophic lake near Neuchatel, Switzerland

characteristic: isolation source

text: Hydrogenibacillus schlegelii

characteristic: organism

text: Cell culture

text: DSM 2000

text: H. schlegelii genome

text: type strain of Bacillus schlegelii


NCTC 7096

characteristic: External Id

text: University of Neuchatel

characteristic: INSDC center name

text: live

text: Pathogen.env

text: University of Aberdeen

characteristic: collected by

text: Aneurinibacillus migulanus

text: NCTC 7096

text: Pathogen: environmental/food/other sample from Aneurinibacillus migulanus

text: type strain of Bacillus migulanus


Pseudooctadecabacter jejudonensis

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: water

characteristic: env biome

text: South Korea: Soesokkak Estuary

text: water from the Soesokkak Estuary

text: Pseudooctadecabacter jejudonensis

text: cell culture

characteristic: sample type

characteristic: strain

text: Microbe sample from Pseudooctadecabacter jejudonensis

text: type strain of Octadecabacter jejudonensis


name: Thioalkalimicrobium microaerophilus ASL8-2Thioalkalimicrobium microaerophilus ASL8-2

text: DOE Joint Genome Institute

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

characteristic: NCBI submission model

text: MIGS.ba

text: Obligately chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacterium belonging to the genus Thioalkalivibrio. This strain is isolated from a soda lake.

characteristic: description

text: Soda Lake

text: Saline lake

characteristic: env feature

text: USA:Washington, Soap Lake

text: 47.3962 N 119.4959 W

characteristic: lat lon

text: Thiomicrospira microaerophila

text: MIGS Cultured Bacterial/Archaeal sample from Thiomicrospira microaerophila

characteristic: title

text: type strain of Thioalkalimicrobium microaerophilum

characteristic: type-material


text: Shandong University

text: live

text: MIGS.ba

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: culture collection

text: Genetics of Pseudoalteromonas tetraodonis

text: water

text: seawater

text: puffer fish

text: Japan

characteristic: geo loc name

text: puffer fish

characteristic: nat-host

text: Pseudoalteromonas tetraodonis

characteristic: organism

text: GFC

text: Pseudoalteromonas tetraodonis str. DSM 9166 genome sequencing

text: type strain of Alteromonas tetraodonis


Pseudogymnoascus destructans 20631-21

characteristic: External Id

text: US Forest Service

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: USA: New York, Williams Hotel

text: Myotis lucifugus

characteristic: host

characteristic: mating type

text: Pseudogymnoascus destructans

text: fungal culture

text: Microbe sample from Pseudogymnoascus destructans

text: culture from type material of Geomyces destructans


text: University of Delaware

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: slow growth

characteristic: growth phase

text: Ruegeria pomeroyi DSS-3

text: Heterotrophic marine bacteria

characteristic: strain

text: type strain of Silicibacter pomeroyi


text: University of Delaware

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: rapid growth

text: Ruegeria pomeroyi DSS-3

text: Heterotrophic marine bacteria

characteristic: title

text: type strain of Silicibacter pomeroyi

characteristic: type-material


Agrobacterium tumefaciens Ach5

text: Academia Sinica

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.plant-associated

text: Agrobacterium tumefaciens Ach5

characteristic: description

text: woodland

characteristic: env biome

text: woodland

characteristic: env feature

text: yarrow

text: USA: Contra Costa County, California

characteristic: geo loc name

text: Achillea ptarmica

text: PMID: 10856653

text: not recorded

characteristic: lat lon

text: Agrobacterium tumefaciens

characteristic: organism

text: PMID: 10856653

text: Agrobacterium tumefaciens Ach5


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Saliva or Blood

characteristic: body site

text: DS-VAD

text: No

characteristic: is tumor

text: SNP Genotypes (Array)

characteristic: molecular data type

text: Homo sapiens

text: female

characteristic: sex

text: Case-Control

characteristic: study design

text: Vitiligo

characteristic: study disease

characteristic: study name

text: Yes

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Non-tumor DNA sample from Saliva or Blood of a human female participant in the dbGaP study "VitGene Generalized Vitiligo Genetics Study-Phase 2"


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

text: Saliva or Blood

text: DS-VAD

text: No

text: SNP Genotypes (Array)

text: Homo sapiens

characteristic: organism

text: female

text: Case-Control

text: Vitiligo

text: VitGene Generalized Vitiligo Genetics Study-Phase 2

text: Yes

characteristic: title


text: dbGaP

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Saliva or Blood

characteristic: body site

text: DS-VAD

text: No

characteristic: is tumor

text: SNP Genotypes (Array)

characteristic: molecular data type

text: Homo sapiens

text: male

text: Case-Control

text: Vitiligo

text: Yes

text: Non-tumor DNA sample from Saliva or Blood of a human male participant in the dbGaP study "VitGene Generalized Vitiligo Genetics Study-Phase 2"


text: DSM Bio-based Products & Services B.V.

text: live

text: Microbe, viral or environmental

characteristic: culture-collection

text: frozen stock culture

characteristic: isolation source

text: Rasamsonia emersonii CBS 393.64

text: cell culture

characteristic: sample type

text: CBS 393.64

characteristic: strain

text: Microbe sample from Rasamsonia emersonii CBS 393.64

text: type material of Talaromyces emersonii

characteristic: type-material


characteristic: External Id

text: Chonbuk National University

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Young-Chang Kim

characteristic: collected by

characteristic: collection date

text: waste water sediment

characteristic: env biome

text: South Korea: Taejon

characteristic: geo loc name

text: Seong-Jae Kim

characteristic: identified by

text: contaminated sediment in Taejon

text: Sphingobium chungbukense

text: single cell

text: Sphingobium chungbukense DJ77

text: type strain of Sphingomonas chungbukensis


text: Smyth, Bioinformatics, Walter and Eliza Hall Institute of Medical Research

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: CD103 high

characteristic: cell population

text: June 13, 2012

characteristic: date

text: Mus musculus

characteristic: organism

text: CD8 dendritic cells

text: CpG treated 1

characteristic: title

text: CpG treated

characteristic: treatment


characteristic: External Id

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Generic

text: CD103 high

text: June 13, 2012

text: Mus musculus

text: CD8 dendritic cells

characteristic: strain

text: CpG treated 2

text: CpG treated


text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: CD103 negative

text: June 13, 2012

text: Mus musculus

text: CD8 dendritic cells

text: CD103 negative 1

text: Untreated


text: live

text: Generic

text: CD103 negative

text: June 13, 2012

text: Mus musculus

text: CD8 dendritic cells

text: CD103 negative 2

text: Untreated


text: live

text: Generic

text: CD103 low

text: May 5, 2013

text: Mus musculus

text: CD8 dendritic cells

text: CD103 low 1

text: Untreated


text: live

text: Generic

text: CD103 low

text: May 5, 2013

text: Mus musculus

text: CD8 dendritic cells

text: CD103 low 2

text: Untreated


text: live

text: Generic

text: CD103 negative

text: May 5, 2013

text: Mus musculus

text: CD8 dendritic cells

text: CD103 negative 3

text: Untreated


text: dbGaP

text: live

text: Generic

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Blood

characteristic: body site

text: HMB

text: White Blood Cells

characteristic: histological type

text: No

characteristic: is tumor

text: Homo sapiens

text: female

characteristic: sex

text: Prospective Longitudinal Cohort

characteristic: study design

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Non-tumor DNA sample from Blood of a human female participant in the dbGaP study "Population Architecture using Genomics and Epidemiology (PAGE): Causal Variants Across the Life Course (CALiCo): Hispanic Community Health Study / Study of Latinos (HCHS/SOL)"


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: SRA accession

text: DNA

text: Blood

text: HMB-NPU

text: White Blood Cells

text: No

text: Homo sapiens

characteristic: organism

text: female

text: Prospective Longitudinal Cohort

text: Population Architecture using Genomics and Epidemiology (PAGE): Causal Variants Across the Life Course (CALiCo): Hispanic Community Health Study / Study of Latinos (HCHS/SOL)

characteristic: title


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Blood

text: HMB

text: White Blood Cells

text: No

text: Homo sapiens

text: male

text: Prospective Longitudinal Cohort

text: Non-tumor DNA sample from Blood of a human male participant in the dbGaP study "Population Architecture using Genomics and Epidemiology (PAGE): Causal Variants Across the Life Course (CALiCo): Hispanic Community Health Study / Study of Latinos (HCHS/SOL)"


text: dbGaP

text: live

text: Generic

text: DNA

text: Blood

characteristic: body site

text: HMB

text: White Blood Cells

characteristic: histological type

text: No

characteristic: is tumor

text: Homo sapiens

text: female

characteristic: sex

text: Prospective Longitudinal Cohort

characteristic: study design

characteristic: study name


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: DNA

text: Blood

text: HMB-NPU

text: White Blood Cells

text: No

text: Homo sapiens

text: male

text: Prospective Longitudinal Cohort

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle


text: dbGaP

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: SRA accession

text: DNA

text: Blood

text: HMB

text: White Blood Cells

text: Yes

characteristic: is technical control

text: No

text: Homo sapiens

characteristic: organism

text: male

text: Prospective Longitudinal Cohort

characteristic: title


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Blood

characteristic: body site

text: HMB

text: White Blood Cells

characteristic: histological type

text: Yes

text: No

characteristic: is tumor

text: Homo sapiens

text: female

text: Prospective Longitudinal Cohort


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: DNA

text: Blood

text: HMB-NPU

text: White Blood Cells

text: Yes

text: No

text: Homo sapiens

text: female

characteristic: sex

text: Prospective Longitudinal Cohort

characteristic: study design

characteristic: study name

characteristic: submitted sample id


text: dbGaP

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: SRA accession

text: DNA

text: Blood

text: HMB-NPU

text: White Blood Cells

text: Yes

characteristic: is technical control

text: No

text: Homo sapiens

text: male

text: Prospective Longitudinal Cohort

characteristic: submitted subject id

characteristic: submitter handle


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Blood

characteristic: body site

text: HMB

text: Blood

text: No

text: Homo sapiens

characteristic: organism

text: female

text: Prospective Longitudinal Cohort

text: Non-tumor DNA sample from Blood of a human female participant in the dbGaP study Omics in Latinos (Ola) - Genetic Analysis of HCHS/SOL

characteristic: title


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: DNA

text: Blood

text: HMB

text: Blood

characteristic: histological type

text: No

characteristic: is tumor

text: Homo sapiens

text: female

characteristic: sex

text: Prospective Longitudinal Cohort

characteristic: study design

text: Omics in Latinos (Ola) - Genetic Analysis of HCHS/SOL


text: dbGaP

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: SRA accession

text: DNA

text: Blood

text: HMB

text: Blood

text: No

text: Homo sapiens

text: male

text: Prospective Longitudinal Cohort

characteristic: study name

characteristic: submitted sample id

text: Non-tumor DNA sample from Blood of a human male participant in the dbGaP study Omics in Latinos (Ola) - Genetic Analysis of HCHS/SOL


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Blood

text: HMB-NPU

text: Blood

text: No

text: Homo sapiens

text: female

text: Prospective Longitudinal Cohort

characteristic: submitted subject id

characteristic: submitter handle


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: DNA

text: Blood

characteristic: body site

text: HMB-NPU

text: Blood

text: No

text: Homo sapiens

characteristic: organism

text: male

text: Prospective Longitudinal Cohort

characteristic: title


text: dbGaP

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

text: DNA

text: Blood

text: HMB

text: Blood

characteristic: histological type

text: Yes

characteristic: is technical control

text: No

characteristic: is tumor

text: Homo sapiens

text: female

characteristic: sex

text: Prospective Longitudinal Cohort

characteristic: study design


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

text: Blood

text: HMB

text: Blood

text: Yes

text: No

text: Homo sapiens

text: male

text: Prospective Longitudinal Cohort

characteristic: study name

characteristic: submitted sample id


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: DNA

characteristic: biospecimen repository sample id

text: Blood

characteristic: body site

text: HMB-NPU

text: Blood

text: Yes

text: No

text: Homo sapiens

text: female

text: Prospective Longitudinal Cohort

characteristic: submitted subject id

characteristic: submitter handle


text: dbGaP

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

text: DNA

text: Blood

text: HMB-NPU

text: Blood

characteristic: histological type

text: Yes

characteristic: is technical control

text: No

characteristic: is tumor

text: Homo sapiens

characteristic: organism

text: male

text: Prospective Longitudinal Cohort

characteristic: title


Pseudoxanthomonas dokdonensis DSM-21858

text: CSIR-Institute of Microbial Technology

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: collection date

characteristic: culture collection

text: South Korea: Dokdo island

characteristic: geo loc name

text: soil

characteristic: isolation source

text: Pseudoxanthomonas dokdonensis

text: whole organism

characteristic: sample type

text: DSM 21858

characteristic: strain

text: Microbe sample from Pseudoxanthomonas dokdonensis

text: type strain of Stenotrophomonas dokdonensis

characteristic: type-material


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: DNA

characteristic: analyte type

text: eMERGE

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: HMB

text: SNP Genotypes (NGS)

characteristic: molecular data type

text: Homo sapiens

text: female

characteristic: sex

text: Prospective Longitudinal Cohort

characteristic: study design

text: eMERGE Network PGx Cohort

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

text: eMERGE

characteristic: submitter handle

text: DNA sample from a human female participant in the dbGaP study "eMERGE Network PGx Cohort"


M. immunogenum

text: University of Balearic Islands

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Mycobacterium immunogenum CCUG 47286T was isolated from human bronchial alveolar lavage. It is a rapid growing mycobacteria that can be associated with clinical desease.

characteristic: description

text: Human bronchial alveolar lavage

characteristic: env feature

text: France: Paris

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: bronchial alveolar lavage

characteristic: isolation source

text: Mycobacteroides immunogenum

characteristic: organism

text: CCUG

text: CCUG 47286

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Mycobacterium immunogenum CCUG 47286T

characteristic: title

text: type strain of Mycobacterium immunogenum


CRECTT

characteristic: External Id

text: USDA, ARS, WRRC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: Campylobacter rectus type strain

text: USA: Boston

text: Homo sapiens

text: oral

text: Campylobacter rectus

text: cell culture

characteristic: sample type

text: ATCC 33238

text: Microbe sample from Campylobacter rectus

text: type strain of Wolinella recta

characteristic: type-material


Mesoplasma florum rep-seq

text: Indiana University

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: lemon tree flower

text: Mesoplasma florum L1

text: whole organism

text: Mesoplasma florum rep-seq data

text: type strain of Acholeplasma florum


text: Genome Institute of Singapore

text: live

text: Pathogen.cl

characteristic: SRA accession

text: E. Tunnela

characteristic: collected by

characteristic: culture-collection

text: Finland: Turku

characteristic: geo loc name

text: Homo sapiens

text: pityriasis versicolor

characteristic: host disease

text: skin

text: 60.45 N 22.28 E

characteristic: lat lon

text: Malassezia furfur

text: CBS 7019

text: Pathogen: clinical or host-associated sample from Malassezia furfur

text: culture from neotype of Microsporum furfur


characteristic: External Id

text: Genome Institute of Singapore

text: live

text: Pathogen.cl

text: Homo sapiens

characteristic: host

text: dandruff

text: scalp

characteristic: isolation source

text: Malassezia furfur

characteristic: organism

text: CBS 1878

characteristic: strain

characteristic: title

text: culture from neotype of Saccharomyces ovalis


text: Rubin / Pennacchio, Genomics Division, Lawrence Berkeley National Laboratory

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Salmonella bongori NCTC 12419

text: C2 / C2

characteristic: pacbio sequencing chemistry

text: Bacterial gDNA

text: NCTC 12419

text: type strain of Salmonella choleraesuis subsp. bongori

characteristic: type-material


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Pseudarthrobacter chlorophenolicus A6

text: C2 / C2

text: Bacterial gDNA

text: type strain of Arthrobacter chlorophenolicus


text: live

text: Generic

text: Hydrogenovibrio kuenenii DSM 12350

text: XL / C2

text: Bacterial gDNA

text: DSM 12350

text: type strain of Thiomicrospira kuenenii


text: live

text: Generic

text: Mediterraneibacter gnavus AGR2154

text: XL / C2

text: Bacterial gDNA


text: live

text: Generic

text: Orenia marismortui DSM 5156

text: C2 / C2

text: Bacterial gDNA

text: DSM 5156

text: type strain of Sporohalobacter marismortui


Francisella persica gen. nov.

text: University of Nebraska

text: live

text: Pathogen.cl

text: Earl C. Suitor and Emilio Weiss

characteristic: collected by

characteristic: collection date

characteristic: culture collection

text: Egypt: Nile Barrage Park near Cairo

characteristic: geo loc name

text: soft tick

text: guinea pigs, mice, and newborn chickens

characteristic: host disease

text: soft tick Argus (Persicargas) arboreus (previously referred to as Argas persicus) feeding on the buff-backed heron Bubulcus ibis

text: slightly to moderately pathogenic

text: heron rookery

text: Francisella persica ATCC VR-331

text: Formerly Wolbachia persica, proposed name Francisella persica strain ATCC VR-331

text: type strain of Wolbachia persica


Chryseobacterium koreense

characteristic: External Id

text: Lycoming College

text: live

text: Microbe, viral or environmental

text: South Korea

text: freshwater stream

characteristic: isolation source

text: Chryseobacterium koreense CCUG 49689

characteristic: organism

text: pure culture

characteristic: sample type

text: CCUG 49689

characteristic: strain

text: Microbe sample from Chryseobacterium koreense CCUG 49689

text: type strain of Kaistella koreensis


Prevotella sp. 109

text: Pirogov Russian National Research Medical University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: 10^9 CFU/g of fecal material

characteristic: concentration

text: Russia: Moscow

text: Homo sapiens

characteristic: host

text: feces of 43-year-old healthy woman

text: Xylanibacter rarus

text: pure culture

text: Microbe sample from Xylanibacter rarus

characteristic: title

text: type strain of Prevotella rara

characteristic: type material


Malafurf

text: Universidad de los Andes

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: R.W. Benham, No. 3176

characteristic: collected by

characteristic: culture-collection

text: Homo sapiens

text: Dandruff

text: scalp

text: Malassezia furfur

text: CBS 1878

characteristic: type-material


Bcordo

characteristic: External Id

text: Universidad Nacional de La Plata

text: live

text: Microbe, viral or environmental

text: Walter Draghi

characteristic: collection date

text: Argentina: Cordoba

characteristic: geo loc name

text: soil

characteristic: isolation source

text: Caballeronia cordobensis

characteristic: organism

text: Whole Organism

characteristic: sample type

text: LMG 27620

text: Microbe sample from Caballeronia cordobensis

text: type strain of Burkholderia cordobensis


text: Bielefeld University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: DSM 8821

characteristic: biomaterial provider

characteristic: culture collection

text: Turicella otitidis DSM 8821, a coryneform bacterium isolated from patients with otitis media

characteristic: description

text: Homo sapiens

characteristic: host

text: middle ear fluid

text: Corynebacterium otitidis

text: pure culture

text: DSM 8821

characteristic: strain

text: Microbe sample from Turicella otitidis DSM 8821

text: type strain of Turicella otitidis


DSM 9887

text: Fujian Academy of Agricultural Sciences

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Japan

text: soil

text: Brevibacillus reuszeri

text: cell culture

text: DSM 9887

text: Microbe sample from Brevibacillus reuszeri

characteristic: title

text: type strain of Bacillus reuszeri


characteristic: External Id

text: USDA, ARS, WRRC

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: USA

characteristic: geo loc name

text: Homo sapiens

text: oral

text: Campylobacter gracilis

text: cell culture

text: ATCC 33236

text: Campylobacter gracilis strain ATCC 33236

text: type strain of Bacteroides gracilis

characteristic: type-material


Bacteroides cellulosolvens ATCC 35603

text: Oak Ridge National Lab

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: culture-collection

text: Bacteroides cellulosolvens ATCC 35603 (DSM 2933) is a cellulolytic bacterium, originally isolated from sewage sludge in co-culture with Clostridium saccharolyticum. Initially classified as a Gram-negative bacterium, analysis of the 16S RNA indicated that B. cellulosolvens, like A. cellulolyticus, is a member of the phylogenetically diverse clostridial assemblage.

text: Canada: Ontario

text: sewage sludge

characteristic: isolation source

characteristic: organism

text: Whole Organism

characteristic: sample type

text: DSM 2933

text: Microbe sample from Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933

text: type strain of Bacteroides cellulosolvens


text: Fujian Academy of Agricultural Sciences

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Japan: Chiba

text: soil

text: Aneurinibacillus migulanus

text: cell culture

text: DSM 2895

text: Microbe sample from Aneurinibacillus migulanus

text: type strain of Bacillus migulanus


Roseovarius crassostreae CV919-312

text: University of Rhode Island

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: Katherine J. Boettcher

characteristic: collected by

text: USA: Maine, Damariscotta River

text: Crassostrea virginica

text: Aliiroseovarius crassostreae

text: tissue sample

characteristic: strain

text: Aliiroseovarius crassostreae CV919-312T

text: type strain of Roseovarius crassostreae


DSM 16317

text: Fujian Academy of Agricultural Sciences

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Netherlands

text: soil

text: Viridibacillus arvi

text: cell culture

text: DSM 16317

text: Microbe sample from Viridibacillus arvi

text: type strain of Bacillus arvi


characteristic: External Id

text: University of Florida

text: live

text: Plant

text: Beusekom 48 (L)

text: Mappia montana

text: Beusekom 48 (L)

characteristic: specimen voucher

text: leaf

characteristic: tissue

text: Plant sample from Mappia montana

characteristic: title


C. curvus ATCC 35224

text: USDA, ARS, WRRC

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: USA: Georgia

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: jaw abscess

text: Campylobacter curvus

text: ATCC 35224

text: Microbe sample from Campylobacter curvus

text: type strain of Wolinella curva

characteristic: type-material


text: University of Hong Kong

text: live

text: MIGS.ba

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: Soil

characteristic: env biome

text: vertisol

characteristic: env feature

text: soil

text: Martinique

text: PMID: 10319504

text: 14.40 N 61.00 W

characteristic: lat lon

text: Paraburkholderia caribensis

characteristic: organism

text: Int J Syst Bacteriol. 1999 Apr;49 Pt 2:787-94.

text: Burkholderia caribensis MWAP64

text: type strain of Burkholderia caribensis


text: Fujian Academy of Agricultural Sciences

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: culture-collection

text: Japan: Choshi

text: soil

characteristic: isolation source

text: Brevibacillus choshinensis

text: cell culture

characteristic: sample type

text: DSM 8552

characteristic: strain

text: Microbe sample from Brevibacillus choshinensis

text: type strain of Bacillus choshinensis


characteristic: External Id

text: Kyoto Institute of Technology

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

characteristic: SRA accession

text: Fusako Kawai et al.

characteristic: collected by

text: Japan: Kyoto

characteristic: geo loc name

text: Mariko Takeuchi et al.

characteristic: identified by

text: Japan: Kyoto

text: Sphingopyxis macrogoltabida

text: whole organism

text: Microbe sample from Sphingopyxis macrogoltabida

characteristic: title

text: type strain of Sphingomonas macrogoltabidus


text: RIPCM

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: Myanmar

text: mineral sulfide ore

text: Acidiplasma cupricumulans

characteristic: organism

text: cell culture

text: Microbe sample from Acidiplasma cupricumulans

text: type strain of Ferroplasma cupricumulans

characteristic: type-material


Alicyclobacillus acidoterrestris C2c1

text: Broad Institute of Harvard and MIT

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: USA: Boston

text: ATCC

text: Alicyclobacillus acidoterrestris

text: cell culture

text: ATCC 49025

text: Microbe sample from Alicyclobacillus acidoterrestris

text: type strain of Bacillus acidoterrestris


name: Microbe sample from Solibacillus silvestris

text: Charles River

text: live

text: Microbe, viral or environmental

text: Solibacillus silvestris

text: single cell

characteristic: sample type

text: DSM 12223

characteristic: strain

text: type strain of Bacillus silvestris


OXPF

characteristic: External Id

text: Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

characteristic: culture-collection

text: Oxobacter pfennigii DSM 3222T (originally named Clostridium pfennigii) is an anaerobic endospore-forming bacterium, which was isolated from rumen fluid of a steer and described by Krumholz and Bryant in 1985.

characteristic: description

text: rumen

characteristic: isolation source

text: Oxobacter pfennigii

text: whole organism

text: DSM 3222

text: Microbe sample from Oxobacter pfennigii

text: type strain of Clostridium pfennigii


text: Fujian Academy of Agricultural Sciences

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

characteristic: SRA accession

text: China: Xinjiang

characteristic: geo loc name

text: soil

text: Cytobacillus dafuensis

text: cell culture

text: Microbe sample from Cytobacillus dafuensis

text: type strain of Bacillus dafuensis

characteristic: type material


text: University of Trento

text: live

text: Pathogen.env

text: Hospital Dr. Negrin

characteristic: collected by

characteristic: collection date

characteristic: culture collection

text: Draft genome sequence of Mycobacterium canariasense CCUG 47953

text: Spain: Las Palmas

text: Homo sapiens

characteristic: host

text: blood

text: Mycolicibacterium canariasense

characteristic: organism

text: CCUG 47953

text: Mycobacterium canariasense CCUG 47953

characteristic: title

text: type strain of Mycobacterium canariasense


text: University of Trento

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: Draft genome sequence of Mycobacterium conceptionense CCUG 50187

text: Reunion: Indian Ocean

text: Homo sapiens

text: bone tissue biopsy, wound liquid outflow

text: Mycolicibacterium conceptionense

text: CCUG 50187

text: Mycobacterium conceptionense CCUG 50187

text: type strain of Mycobacterium conceptionense

characteristic: type-material


characteristic: External Id

text: University of Trento

characteristic: INSDC center name

text: live

text: Pathogen.env

text: K. H. Schroder

text: Draft genome sequence of Mycobacterium confluentis DSM 44017

characteristic: description

text: Germany: Koblenz

text: Homo sapiens

text: sputum

text: Mycolicibacterium confluentis

text: DSM 44017

characteristic: strain

text: Mycobacterium confluentis DSM 44017

text: type strain of Mycobacterium confluentis


text: University of Trento

text: live

text: Pathogen.env

characteristic: NCBI submission package

characteristic: SRA accession

text: V. Levy-Frebault

text: Draft genome sequence of Mycobacterium fallax DSM 44179

text: France: Seine River

characteristic: geo loc name

text: water

characteristic: isolation source

text: Mycolicibacterium fallax

text: DSM 44179

text: Mycobacterium fallax DSM 44179

text: type strain of Mycobacterium fallax


text: University of Trento

text: live

text: Pathogen.env

characteristic: culture collection

text: Draft genome sequence of Mycobacterium hiberniae ATCC 49874

text: Ireland

text: Ctenidium molluscum

text: moss

text: Mycolicibacter hiberniae

text: ATCC 49874

text: Mycobacterium hiberniae ATCC 49874

text: type strain of Mycobacterium hiberniae


text: University of Trento

text: live

text: Pathogen.env

text: S. Maloney

characteristic: collected by

characteristic: collection date

text: Draft genome sequence of Mycobacterium immunogenum ATCC 700506

text: USA: Missouri

text: metalworking fluids from industrial sites

text: Mycobacteroides immunogenum

text: ATCC 700505

text: Mycobacterium immunogenum ATCC 700505

text: type strain of Mycobacterium immunogenum


text: University of Trento

text: live

text: Pathogen.env

text: P. Heidarieh

text: Draft genome sequence of Mycobacterium iranicum DSM 45541

text: Iran: Isfahan

text: Homo sapiens

characteristic: host

text: bronchoalveolar lavage

text: Mycolicibacterium iranicum

characteristic: organism

text: DSM 45541

text: Mycobacterium iranicum DSM 45541

characteristic: title

text: type strain of Mycobacterium iranicum


text: University of Trento

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

text: S. Pierdomenico

text: Draft genome sequence of Mycobacterium longobardum DSM 45394

text: Italy: Lombardia

text: Homo sapiens

text: sputum

text: Mycolicibacter longobardus

text: DSM 45394

text: Mycobacterium longobardum DSM 45394

text: type strain of Mycobacterium longobardum


characteristic: External Id

text: University of Trento

text: live

text: Pathogen.env

characteristic: NCBI submission model

text: H. J. Kim

text: Draft genome sequence of Mycobacterium senuense DSM 44999

text: South Korea: Seoul

text: Homo sapiens

text: sputum

text: Mycolicibacter senuensis

text: DSM 44999

text: Mycobacterium senuense DSM 44999

text: type strain of Mycobacterium senuense

characteristic: type-material


text: University of Trento

characteristic: INSDC center name

text: live

text: Pathogen.env

text: J. E. Pfyffer

text: Draft genome sequence of Mycobacterium wolinskyi ATCC 700010

characteristic: description

text: Switzerland

text: Homo sapiens

text: facial wound

text: Mycolicibacterium wolinskyi

text: ATCC 700010

characteristic: strain

text: Mycobacterium wolinskyi ATCC 700010

text: type strain of Mycobacterium wolinskyi


text: University of California Berkeley

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

characteristic: SRA accession

text: td kos3 IP

characteristic: genotype

text: Torulaspora delbrueckii CBS 1146

text: ChIP-Seq

characteristic: sample type

text: CBS 1146

text: Microbe sample from Torulaspora delbrueckii CBS 1146

text: neotype of Saccharomyces delbrueckii


text: University of California Berkeley

text: live

text: Microbe, viral or environmental

text: td kos3 input

text: Torulaspora delbrueckii CBS 1146

text: ChIP-Seq

text: CBS 1146

text: neotype of Saccharomyces delbrueckii


text: University of California Berkeley

text: live

text: Microbe, viral or environmental

text: td sir2 IP

text: Torulaspora delbrueckii CBS 1146

text: ChIP-Seq

text: CBS 1146

text: neotype of Saccharomyces delbrueckii


text: University of California Berkeley

text: live

text: Microbe, viral or environmental

text: td sir2 input

text: Torulaspora delbrueckii CBS 1146

text: ChIP-Seq

text: CBS 1146

text: neotype of Saccharomyces delbrueckii


text: University of California Berkeley

text: live

text: Microbe, viral or environmental

text: td sir4 IP

text: Torulaspora delbrueckii CBS 1146

text: ChIP-Seq

text: CBS 1146

text: neotype of Saccharomyces delbrueckii


text: University of California Berkeley

text: live

text: Microbe, viral or environmental

text: td sir4 input

text: Torulaspora delbrueckii CBS 1146

text: ChIP-Seq

text: CBS 1146

text: neotype of Saccharomyces delbrueckii


text: University of California Berkeley

text: live

text: Microbe, viral or environmental

text: td noTag IP

text: Torulaspora delbrueckii CBS 1146

text: ChIP-Seq

text: CBS 1146

text: neotype of Saccharomyces delbrueckii


text: University of California Berkeley

text: live

text: Microbe, viral or environmental

text: td noTag input

text: Torulaspora delbrueckii CBS 1146

text: ChIP-Seq

text: CBS 1146

text: neotype of Saccharomyces delbrueckii


text: University of California Berkeley

text: live

text: Microbe, viral or environmental

text: td sir4_kos3 IP

text: Torulaspora delbrueckii CBS 1146

text: ChIP-Seq

text: CBS 1146

text: neotype of Saccharomyces delbrueckii


text: University of California Berkeley

text: live

text: Microbe, viral or environmental

text: td sir2_kos3 IP

text: Torulaspora delbrueckii CBS 1146

text: ChIP-Seq

text: CBS 1146

text: neotype of Saccharomyces delbrueckii


text: University of California Berkeley

text: live

text: Microbe, viral or environmental

text: td sir2_kos3 input

text: Torulaspora delbrueckii CBS 1146

text: ChIP-Seq

text: CBS 1146

text: neotype of Saccharomyces delbrueckii


text: University of California Berkeley

text: live

text: Microbe, viral or environmental

text: td WT A

text: Torulaspora delbrueckii CBS 1146

text: RNA-Seq

text: CBS 1146

text: neotype of Saccharomyces delbrueckii


text: University of California Berkeley

text: live

text: Microbe, viral or environmental

text: td WT B

text: Torulaspora delbrueckii CBS 1146

text: RNA-Seq

text: CBS 1146

text: neotype of Saccharomyces delbrueckii


text: University of California Berkeley

text: live

text: Microbe, viral or environmental

text: td WT C

text: Torulaspora delbrueckii CBS 1146

text: RNA-Seq

text: CBS 1146

text: neotype of Saccharomyces delbrueckii


text: University of California Berkeley

text: live

text: Microbe, viral or environmental

text: td kos3 A

text: Torulaspora delbrueckii CBS 1146

text: RNA-Seq

text: CBS 1146

text: neotype of Saccharomyces delbrueckii


text: University of California Berkeley

text: live

text: Microbe, viral or environmental

text: td kos3 B

text: Torulaspora delbrueckii CBS 1146

text: RNA-Seq

text: CBS 1146

text: neotype of Saccharomyces delbrueckii


text: University of California Berkeley

text: live

text: Microbe, viral or environmental

text: td kos3 C

text: Torulaspora delbrueckii CBS 1146

text: RNA-Seq

text: CBS 1146

text: neotype of Saccharomyces delbrueckii


text: University of California Berkeley

text: live

text: Microbe, viral or environmental

text: td sir2 A

text: Torulaspora delbrueckii CBS 1146

text: RNA-Seq

text: CBS 1146

text: neotype of Saccharomyces delbrueckii


text: University of California Berkeley

text: live

text: Microbe, viral or environmental

text: td sir2 B

text: Torulaspora delbrueckii CBS 1146

text: RNA-Seq

text: CBS 1146

text: neotype of Saccharomyces delbrueckii


text: University of California Berkeley

text: live

text: Microbe, viral or environmental

text: td sir2 C

text: Torulaspora delbrueckii CBS 1146

text: RNA-Seq

text: CBS 1146

text: neotype of Saccharomyces delbrueckii


text: University of California Berkeley

text: live

text: Microbe, viral or environmental

text: td sir4 A

text: Torulaspora delbrueckii CBS 1146

text: RNA-Seq

text: CBS 1146

text: neotype of Saccharomyces delbrueckii


text: University of California Berkeley

text: live

text: Microbe, viral or environmental

text: td sir4 B

text: Torulaspora delbrueckii CBS 1146

text: RNA-Seq

text: CBS 1146

text: neotype of Saccharomyces delbrueckii


text: University of California Berkeley

text: live

text: Microbe, viral or environmental

text: td sir4 C

text: Torulaspora delbrueckii CBS 1146

text: RNA-Seq

text: CBS 1146

text: neotype of Saccharomyces delbrueckii


text: University of California Berkeley

text: live

text: Microbe, viral or environmental

text: td ago1 A

text: Torulaspora delbrueckii CBS 1146

text: RNA-Seq

text: CBS 1146

text: neotype of Saccharomyces delbrueckii


text: University of California Berkeley

text: live

text: Microbe, viral or environmental

text: td ago1 B

text: Torulaspora delbrueckii CBS 1146

text: RNA-Seq

text: CBS 1146

text: neotype of Saccharomyces delbrueckii


text: University of California Berkeley

text: live

text: Microbe, viral or environmental

text: td ago1 C

text: Torulaspora delbrueckii CBS 1146

text: RNA-Seq

text: CBS 1146

text: neotype of Saccharomyces delbrueckii


text: University of California Berkeley

text: live

text: Microbe, viral or environmental

text: td dcr1 A

text: Torulaspora delbrueckii CBS 1146

text: RNA-Seq

text: CBS 1146

text: neotype of Saccharomyces delbrueckii


text: University of California Berkeley

text: live

text: Microbe, viral or environmental

text: td dcr1 B

text: Torulaspora delbrueckii CBS 1146

text: RNA-Seq

text: CBS 1146

text: neotype of Saccharomyces delbrueckii


text: University of California Berkeley

text: live

text: Microbe, viral or environmental

text: td dcr1 C

text: Torulaspora delbrueckii CBS 1146

text: RNA-Seq

text: CBS 1146

text: neotype of Saccharomyces delbrueckii


text: University of California Berkeley

text: live

text: Microbe, viral or environmental

text: td ago1dcr1 A

text: Torulaspora delbrueckii CBS 1146

text: RNA-Seq

text: CBS 1146

text: neotype of Saccharomyces delbrueckii


text: University of California Berkeley

text: live

text: Microbe, viral or environmental

text: td ago1dcr1 B

text: Torulaspora delbrueckii CBS 1146

text: RNA-Seq

text: CBS 1146

text: neotype of Saccharomyces delbrueckii


text: University of California Berkeley

text: live

text: Microbe, viral or environmental

text: td ago1dcr1 C

text: Torulaspora delbrueckii CBS 1146

text: RNA-Seq

text: CBS 1146

text: neotype of Saccharomyces delbrueckii


Agrobacterium tumefaciens B6

text: Monash University Malaysia

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: Microbe sample from Agrobacterium tumefaciens B6

text: USA: Shenandoah, Iowa

characteristic: geo loc name

text: Apple seedling crown gall

characteristic: isolation-source

text: Agrobacterium tumefaciens str. B6

text: cell culture

text: Microbe sample from Agrobacterium tumefaciens str. B6


Agrobacterium radiobacter NCPPB 3001

text: Monash University Malaysia

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: Microbe sample from Agrobacterium radiobacter NCPPB 3001

text: soil

characteristic: isolation source

text: Agrobacterium radiobacter

characteristic: organism

text: cell culture

text: NCPPB 3001

characteristic: title

text: type strain of Agrobacterium radiobacter


characteristic: External Id

text: dbGaP

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Cervix

characteristic: body site

text: HMB

text: Adenocarcinoma

characteristic: histological type

text: Yes

characteristic: is tumor

text: Homo sapiens

text: female

characteristic: sex

text: Case Set

characteristic: study design

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Tumor DNA sample from Cervix of a human female participant in the dbGaP study High Resolution Maps of the HeLa 3D Genome Using Hi-C


text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

text: Cervix

text: HMB

text: Adenocarcinoma

text: Yes

text: Homo sapiens

characteristic: organism

text: female

text: Case Set

text: High Resolution Maps of the HeLa 3D Genome Using Hi-C

characteristic: title


Pandoraea norimbergensis DSM 11628

characteristic: External Id

text: University of Malaya

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: collection date

text: Germany

characteristic: geo loc name

text: oxic water above sulfide containing lake sediment

characteristic: isolation source

text: Pandoraea norimbergensis

text: Cell culture

characteristic: sample type

text: DSM 11628

characteristic: strain

text: Microbe sample from Pandoraea norimbergensis DSM 11628

text: type strain of Burkholderia norimbergensis

characteristic: type-material


tag: Namespace:DOE Joint Genome Institute

text: DOE Joint Genome Institute

characteristic: INSDC center name

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: 54.33 N 10.13 E

characteristic: lat lon

text: Krasilnikoviella flava

text: DSM 21481

text: Promicromonospora flava DSM 21481

text: type strain of Promicromonospora flava


Spirochaeta sphaeroplastigenens

text: UoH

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: Prof. CH. Sasikala

characteristic: biomaterial provider

text: Dr. S. Vishnuvardhan Reddy

characteristic: collected by

text: A isolate from the alkaline soda lake, Lonar, India

text: India: Lonar

text: Alkaline soda lake

text: Alkalispirochaeta sphaeroplastigenens

text: whole organism

text: Microbe sample from Alkalispirochaeta sphaeroplastigenens

text: type strain of Spirochaeta sphaeroplastigenens


LMG 26267

characteristic: External Id

text: Research Institute of Forest Ecology Environment and Protection

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

text: United Kingdom

text: Quercus robur

characteristic: host

text: Lonsdalea britannica

characteristic: organism

text: whole organism

text: LMG 26267

text: Microbe sample from Lonsdalea britannica

characteristic: title

text: type strain of Lonsdalea quercina subsp. britannica


LMG 26264

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: collection date

text: Spain

characteristic: geo loc name

text: Quercus ilex

text: Lonsdalea iberica

text: whole organism

text: LMG 26264

text: Microbe sample from Lonsdalea iberica

text: type strain of Lonsdalea quercina subsp. iberica


text: CSIR - Indian Institute of Toxicology Research

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: In the project we proposed to study the occurrence of diverse bacteria and their exploitation for screening of novel enzymes and their application in biodegradation

text: India: River Cauvery

text: 11.363656 N 77.741606 E

text: Alcaligenes phenolicus

text: whole organism

characteristic: sample type

characteristic: strain

text: Microbe sample from Alcaligenes phenolicus


text: University of Natural Resources and Life Sciences

characteristic: INSDC first public

text: live

text: MIGS.eu

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: Forest, continental climate

characteristic: env biome

text: Forest

characteristic: env feature

text: Decayed tree log

characteristic: estimated size

text: USA: Peoria

text: 40.72 N 89.61 W

characteristic: lat lon

text: Sugiyamaella lignohabitans

text: diploid

characteristic: ploidy

text: MIGS Eukaryotic sample from Sugiyamaella lignohabitans

text: culture from holotype of Candida lignohabitans

characteristic: type-material


Kosakonia oryzae Ola51T

characteristic: External Id

text: Zhejiang university

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

characteristic: SRA accession

text: China: Guangzhou

text: Oryza latifolia

characteristic: host

text: roots

characteristic: isolation source

text: Kosakonia oryzae

characteristic: organism

text: single cell

text: Ola 51

text: Microbe sample from Kosakonia oryzae

characteristic: title

text: type strain of Enterobacter oryzae


text: Human Epigenetics, Baker Heart and Diabetes Institute

characteristic: INSDC center name

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: female

characteristic: Sex

text: white blood cells

characteristic: cell type

text: control

characteristic: kidney complication

text: Homo sapiens

text: white blood cells

text: Non-diabetic Female control rep2


characteristic: INSDC first public

text: live

text: Generic

text: female

text: white blood cells

text: control

text: Homo sapiens

text: white blood cells

text: Non-diabetic Female control rep3


text: live

text: Generic

text: female

text: white blood cells

text: control

text: Homo sapiens

text: white blood cells

text: Non-diabetic Female control rep4


text: live

text: Generic

text: female

text: white blood cells

text: control

text: Homo sapiens

text: white blood cells

text: Non-diabetic Female control rep5


text: live

text: Generic

text: female

text: white blood cells

text: control

text: Homo sapiens

text: white blood cells

text: Non-diabetic Female control rep6


text: live

text: Generic

text: female

text: white blood cells

text: control

text: Homo sapiens

text: white blood cells

text: Non-diabetic Female control rep7


text: live

text: Generic

text: male

text: white blood cells

text: control

text: Homo sapiens

text: white blood cells

text: Non-diabetic Male control rep1


text: live

text: Generic

text: male

text: white blood cells

text: control

text: Homo sapiens

text: white blood cells

text: Non-diabetic Male control rep2


text: live

text: Generic

text: male

text: white blood cells

text: control

text: Homo sapiens

text: white blood cells

text: Non-diabetic Male control rep3


text: live

text: Generic

text: male

text: white blood cells

text: control

text: Homo sapiens

text: white blood cells

text: Non-diabetic Male control rep4


text: live

text: Generic

text: male

text: white blood cells

text: control

text: Homo sapiens

text: white blood cells

text: Non-diabetic Male control rep5


text: live

text: Generic

text: male

text: white blood cells

text: control

text: Homo sapiens

text: white blood cells

text: Non-diabetic Male control rep6


text: live

text: Generic

text: male

text: white blood cells

text: control

text: Homo sapiens

text: white blood cells

text: Non-diabetic Male control rep7


text: live

text: Generic

text: male

text: white blood cells

text: Renal Macroalbuminuria

text: Homo sapiens

text: white blood cells

text: Diabetic Male macroalbuminuria rep6


text: live

text: Generic

text: male

text: white blood cells

text: No renal complication

text: Homo sapiens

text: white blood cells

text: Diabetic Male No complication rep1


text: live

text: Generic

text: male

text: white blood cells

text: No renal complication

text: Homo sapiens

text: white blood cells

text: Diabetic Male No complication rep2


text: live

text: Generic

text: male

text: white blood cells

text: No renal complication

text: Homo sapiens

text: white blood cells

text: Diabetic Male No complication rep3


text: live

text: Generic

text: male

text: white blood cells

text: No renal complication

text: Homo sapiens

text: white blood cells

text: Diabetic Male No complication rep4


text: live

text: Generic

text: male

text: white blood cells

text: No renal complication

text: Homo sapiens

text: white blood cells

text: Diabetic Male No complication rep5


text: live

text: Generic

text: female

text: white blood cells

text: control

text: Homo sapiens

text: white blood cells

text: Non-diabetic Female control rep1


text: live

text: Generic

text: female

text: white blood cells

text: End-stage renal disease

text: Homo sapiens

text: white blood cells

text: Diabetic Female end-stage renal disease rep2


text: live

text: Generic

text: female

text: white blood cells

text: End-stage renal disease

text: Homo sapiens

text: white blood cells

text: Diabetic Female end-stage renal disease rep3


text: live

text: Generic

text: female

text: white blood cells

text: End-stage renal disease

text: Homo sapiens

text: white blood cells

text: Diabetic Female end-stage renal disease rep4


text: live

text: Generic

text: female

text: white blood cells

text: Renal Macroalbuminuria

text: Homo sapiens

text: white blood cells

text: Diabetic Female macroalbuminuria rep1


text: live

text: Generic

text: female

text: white blood cells

text: Renal Macroalbuminuria

text: Homo sapiens

text: white blood cells

text: Diabetic Female macroalbuminuria rep2


text: live

text: Generic

text: female

text: white blood cells

text: Renal Macroalbuminuria

text: Homo sapiens

text: white blood cells

text: Diabetic Female macroalbuminuria rep3


text: live

text: Generic

text: female

text: white blood cells

text: Renal Macroalbuminuria

text: Homo sapiens

text: white blood cells

text: Diabetic Female macroalbuminuria rep4


text: live

text: Generic

text: female

text: white blood cells

text: Renal Macroalbuminuria

text: Homo sapiens

text: white blood cells

text: Diabetic Female macroalbuminuria rep5


text: live

text: Generic

text: female

text: white blood cells

text: No renal complication

text: Homo sapiens

text: white blood cells

text: Diabetic Female No complication rep1


text: live

text: Generic

text: female

text: white blood cells

text: No renal complication

text: Homo sapiens

text: white blood cells

text: Diabetic Female No complication rep2


text: live

text: Generic

text: female

text: white blood cells

text: No renal complication

text: Homo sapiens

text: white blood cells

text: Diabetic Female No complication rep3


text: live

text: Generic

text: female

text: white blood cells

text: No renal complication

text: Homo sapiens

text: white blood cells

text: Diabetic Female No complication rep4


text: live

text: Generic

text: female

text: white blood cells

text: No renal complication

text: Homo sapiens

text: white blood cells

text: Diabetic Female No complication rep5


text: live

text: Generic

text: male

text: white blood cells

text: End-stage renal disease

text: Homo sapiens

text: white blood cells

text: Diabetic Male end-stage renal disease rep1


text: live

text: Generic

text: male

text: white blood cells

text: End-stage renal disease

text: Homo sapiens

text: white blood cells

text: Diabetic Male end-stage renal disease rep2


text: live

text: Generic

text: male

text: white blood cells

text: End-stage renal disease

text: Homo sapiens

text: white blood cells

text: Diabetic Male end-stage renal disease rep3


text: live

text: Generic

text: male

text: white blood cells

text: Renal Macroalbuminuria

text: Homo sapiens

text: white blood cells

text: Diabetic Male macroalbuminuria rep1


text: live

text: Generic

text: male

text: white blood cells

text: Renal Macroalbuminuria

text: Homo sapiens

text: white blood cells

text: Diabetic Male macroalbuminuria rep2


text: live

text: Generic

text: male

text: white blood cells

text: Renal Macroalbuminuria

text: Homo sapiens

text: white blood cells

text: Diabetic Male macroalbuminuria rep3


P. glucanolyticus 5162

text: North Carolina State University

text: live

text: Microbe, viral or environmental

text: Alexander and Priest

characteristic: collected by

characteristic: culture collection

text: soil

text: Paenibacillus glucanolyticus

text: whole organism

characteristic: sample type

text: DSM 5162

characteristic: strain

text: Genomic Sequence of Paenibacillus glucanolyticus

text: type strain of Bacillus glucanolyticus

characteristic: type-material


Clostridium neopropionicum X4

characteristic: External Id

text: Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

characteristic: SRA accession

text: Clostridium neopropionicum X4 is an anaerobic endospore-forming bacterium, being the first representative of propionate fermentation from ethanol with simultaneous acetate production.

characteristic: description

text: anaerobic digester

characteristic: isolation source

text: Anaerotignum neopropionicum

text: whole organism

text: Microbe sample from Anaerotignum neopropionicum

text: type strain of Clostridium neopropionicum


Hsinecauda genome reference

text: Duke University

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Holley RA, et al. Nematospora sinecauda sp. nov., a yeast pathogen of mustard seeds.

characteristic: collection date

text: Genome sequence of the yeast of family Nematosporaceae, Holleya sinecada

text: Canada

characteristic: geo loc name

text: Nysius ericae

characteristic: host

text: Brassica juncea

text: Eremothecium sinecaudum

characteristic: organism

text: fungal pure culture

text: ATCC 58844

text: Microbe sample from Eremothecium sinecaudum

characteristic: title

text: type material of Nematospora sinecauda


text: DOE Joint Genome Institute

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

text: Keywords: GSC:MIxS;MIGS:6.0

text: [Clostridium] polysaccharolyticum

text: DSM 1801

text: Clostridium polysaccharolyticum DSM 1801

text: type strain of Fusobacterium polysaccharolyticum


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Kosakonia sacchari

characteristic: strain

text: Enterobacter sacchari MJ18

text: type strain of Enterobacter sacchari

characteristic: type-material


characteristic: External Id

text: DOE Joint Genome Institute

text: live

text: MIGS.ba

characteristic: NCBI submission package

text: Keywords: GSC:MIxS;MIGS:6.0

text: Aneurinibacillus migulanus

text: DSM 2895

text: Aneurinibacillus migulanus DSM 2895

text: type strain of Bacillus migulanus


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

characteristic: SRA accession

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: 45.434 N 12.338 E

characteristic: lat lon

text: Desulfobacula phenolica

text: DSM 3384

text: Desulfobacula phenolica DSM 3384

text: type strain of Desulfobacterium phenolicum


text: DOE Joint Genome Institute

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Palleronia pelagia

text: DSM 26893

text: Maribius pelagius DSM 26893

text: type strain of Maribius pelagius

characteristic: type material


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Micromonospora matsumotoense

text: DSM 44100

text: Micromonospora matsumotoense DSM 44100

text: type strain of Catellatospora matsumotoense


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Reichenbachiella agariperforans

text: DSM 26134

text: Reichenbachiella agariperforans DSM 26134

text: type strain of Reichenbachia agariperforans


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Aliiroseovarius halocynthiae

text: DSM 27840

text: Roseovarius halocynthiae DSM 27840

text: type strain of Roseovarius halocynthiae


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Pacificibacter marinus

text: DSM 25228

text: Roseovarius marinus DSM 25228

text: type strain of Roseovarius marinus


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Salinimicrobium catena

text: DSM 23553

text: Salinimicrobium catena DSM 23553

text: type strain of Salegentibacter catena


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Salibacterium qingdaonense

text: CGMCC 1.6134

text: Bacillus qingdaonensis CGMCC 1.6134

text: type strain of Bacillus qingdaonensis


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Trichococcus palustris

text: DSM 9172

text: Trichococcus palustris DSM 9172

text: type strain of Ruminococcus palustris


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Salimicrobium album

text: DSM 20748

text: Salimicrobium album DSM 20748

text: type strain of Marinococcus albus


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Trichococcus pasteurii

text: DSM 2381

text: Trichococcus pasteurii DSM 2381

text: type strain of Ruminococcus pasteurii


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Chitinophaga arvensicola

text: DSM 3695

text: Chitinophaga arvensicola DSM 3695

text: type strain of Cytophaga arvensicola


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Bhargavaea beijingensis

text: CGMCC 1.6762

text: Bhargavaea beijingensis CGMCC 1.6762

text: type strain of Bacillus beijingensis


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Bhargavaea ginsengi

text: CGMCC 1.6763

text: Bhargavaea ginsengi CGMCC 1.6763

text: type strain of Bacillus ginsengi


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Fictibacillus solisalsi

text: CGMCC 1.6854

text: Bacillus solisalsi CGMCC 1.6854

text: type strain of Bacillus solisalsi


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Salinimicrobium catena

text: CGMCC 1.6101

text: Salegentibacter catena CGMCC 1.6101

text: type strain of Salegentibacter catena


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Maritalea mobilis

text: CGMCC 1.7002

text: Zhangella mobilis CGMCC 1.7002

text: type strain of Zhangella mobilis


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Xylanibacter ruminicola

text: Prevotella ruminicola BPI-162


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Xylanibacter ruminicola

text: Prevotella ruminicola BPI-34


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Algoriphagus ornithinivorans

text: DSM 15282

text: Algoriphagus ornithinivorans DSM 15282

text: type strain of Hongiella ornithinivorans


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Aliiroseovarius crassostreae

text: DSM 16950

text: Roseovarius crassostreae DSM 16950

text: type strain of Roseovarius crassostreae


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Lentzea waywayandensis

text: DSM 44232

text: Lentzea waywayandensis DSM 44232

text: type strain of Saccharothrix waywayandensis


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Nocardioides scoriae

text: DSM 22127

text: Marmoricola scoriae DSM 22127

text: type strain of Marmoricola scoriae


Zancudomyces culisetae

text: University of Toronto

text: live

text: MIGS.eu

text: MIGS/MIMS/MIMARKS.host-associated

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:6.0

text: stagnantpool next to stream draining

characteristic: env biome

text: pool

characteristic: env feature

text: Culesita impatiens

characteristic: estimated size

text: USA: Colorado

characteristic: geo loc name

text: Culiseta impatiens

characteristic: host

text: mosquito gut

text: stagnant pool next to stream draining

characteristic: isolation-source

text: Zancudomyces culisetae

characteristic: ploidy

text: (a)sexual

characteristic: propagation

text: Zancudomyces culisetae COL-18-3

text: type material of Smittium culisetae


characteristic: External Id

text: DOE Joint Genome Institute

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

text: Keywords: GSC:MIxS;MIGS:6.0

text: Allokutzneria albata

characteristic: organism

text: DSM 44149

characteristic: strain

text: Allokutzneria albata DSM 44149

characteristic: title

text: type strain of Kibdelosporangium albatum

characteristic: type-material


text: DOE Joint Genome Institute

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: MIGS.ba

characteristic: NCBI submission package

characteristic: SRA accession

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: Aneurinibacillus thermoaerophilus

text: L 420-91

text: Aneurinibacillus thermoaerophilus DSM 10154

text: type strain of Bacillus thermoaerophilus


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: 40.567095 N 105.077036 W

characteristic: lat lon

text: Pseudarthrobacter chlorophenolicus

text: Arthrobacter chlorophenolicus DSM 12829

text: type strain of Arthrobacter chlorophenolicus


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Pseudarthrobacter equi

text: IMMIB L-1606

text: Arthrobacter equi DSM 23395

text: type strain of Arthrobacter equi


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

characteristic: culture-collection

text: Keywords: GSC:MIxS;MIGS:6.0

text: Glutamicibacter mysorens

text: DSM 12798

text: Arthrobacter mysorens DSM 12798

text: type strain of Arthrobacter mysorens


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Mycolicibacterium rutilum

text: DSM 45405

text: Mycobacterium rutilum DSM 45405

text: type strain of Mycobacterium rutilum


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Pseudonocardia alni

text: DSM 44104

text: Pseudonocardia alni DSM 44104

text: type strain of Amycolata alni


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Salimicrobium halophilum

text: DSM 4771

text: Salimicrobium halophilum DSM 4771

text: type strain of Bacillus halophilus


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Sinobaca qinghaiensis

text: DSM 17008

text: Sinobaca qinghaiensis DSM 17008

text: type strain of Sinococcus qinghaiensis


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Pelosinus propionicus DSM 13327

text: DSM 13327

text: Pelosinus propionicus DSM 13327

text: type strain of Sporotalea propionica


text: dbGaP

text: live

text: Generic

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Blood

characteristic: body site

text: HMB

text: Blood

characteristic: histological type

text: No

characteristic: is tumor

text: Homo sapiens

text: female

characteristic: sex

text: Prospective Longitudinal Cohort

characteristic: study design

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Non-tumor DNA sample from Blood of a human female participant in the dbGaP study "Population Architecture using Genomics and Epidemiology (PAGE): Causal Variants Across the Life Course (CALiCo): Hispanic Community Health Study / Study of Latinos (HCHS/SOL)"


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

text: Blood

text: HMB

text: Blood

text: No

text: Homo sapiens

characteristic: organism

text: female

text: Prospective Longitudinal Cohort

text: Population Architecture using Genomics and Epidemiology (PAGE): Causal Variants Across the Life Course (CALiCo): Hispanic Community Health Study / Study of Latinos (HCHS/SOL)

characteristic: title


text: dbGaP

text: live

text: Generic

characteristic: SRA accession

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Blood

characteristic: body site

text: HMB

text: Blood

characteristic: histological type

text: No

characteristic: is tumor

text: Homo sapiens

text: male

text: Prospective Longitudinal Cohort

text: Non-tumor DNA sample from Blood of a human male participant in the dbGaP study "Population Architecture using Genomics and Epidemiology (PAGE): Causal Variants Across the Life Course (CALiCo): Hispanic Community Health Study / Study of Latinos (HCHS/SOL)"


characteristic: External Id

text: dbGaP

text: live

text: Generic

text: DNA

text: Blood

text: HMB-NPU

text: Blood

text: No

text: Homo sapiens

text: female

characteristic: sex

text: Prospective Longitudinal Cohort

characteristic: study design

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle


text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

text: Blood

text: HMB-NPU

text: Blood

text: No

text: Homo sapiens

text: male

text: Prospective Longitudinal Cohort


Rathayibacter toxicus FH79

text: US Department of Agriculture

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

text: USDA ARS Foreign Disease-Weed Science Laboratory

characteristic: biomaterial provider

text: I.T. Riley

characteristic: collected by

characteristic: collection date

text: ICMP: 9525

characteristic: culture collection

text: Rathayibacter toxicus type strain FH79 (ICMP 9525)

characteristic: description

text: Australia: Murray Bridge, SA

characteristic: geo loc name

text: Lolium rigidum AND Anguina funesta

characteristic: host

text: Pasture

characteristic: isolation source

text: Rathayibacter toxicus

characteristic: organism

text: cultured isolate

characteristic: sample type

characteristic: strain

text: Microbe sample from Rathayibacter toxicus

characteristic: title

text: type strain of Clavibacter toxicus

characteristic: type-material


Fonsecaea monophora

characteristic: External Id

text: Federal University of Parana

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.cl

text: M. Moore

text: The species F. monophora is reported as cutaneous chromoblastomycosis agent and also has been implicated in neuroinvasive disease.

text: Brazil: Sao Paulo

text: Homo sapiens

text: Chromoblastomycosis

characteristic: host disease

text: 23.55052 S 46.633309 W

characteristic: lat lon

text: Holotype in CBS:H-7146

characteristic: note

text: Fonsecaea monophora

text: CBS 269.37

text: Pathogen: clinical or host-associated sample from Fonsecaea monophora

text: culture from type material of Botrytoides monophora


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: saliva

characteristic: body site

text: DS-VAD

text: No

characteristic: is tumor

text: SNP Genotypes (Array)

characteristic: molecular data type

text: Homo sapiens

text: male

characteristic: sex

text: Case-Control

characteristic: study design

text: Vitiligo

characteristic: study disease

characteristic: study name

text: Yes

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Non-tumor DNA sample from saliva of a human male participant in the dbGaP study "VitGene Generalized Vitiligo Genetics Study-Phase 2"


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: DNA

text: saliva

text: DS-VAD

text: No

text: SNP Genotypes (Array)

text: Homo sapiens

characteristic: organism

text: male

text: Case-Control

text: Vitiligo

text: VitGene Generalized Vitiligo Genetics Study-Phase 2

text: Yes

characteristic: title


text: UC Berkeley

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

characteristic: SRA accession

text: USA: Rifle, CO

text: missing

characteristic: isolate

text: groundwater metagenome

text: 39.5369 N 107.7828 W

text: Candidatus Peregrinibacteria bacterium

text: missing

characteristic: strain

text: Microbe sample from Candidatus Peregrinibacteria bacterium

type: Physical biosample accession number


text: DOE Joint Genome Institute

characteristic: INSDC secondary accession

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: Methanohalophilus halophilus

text: Methanohalophilus halophilus Z-7982

text: type strain of Methanococcus halophilus

characteristic: type-material


Strain CYW5

text: National Chung Hsing University

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: Taiwan: offshore of southwestern Taiwan in South China Sea

characteristic: geo loc name

text: sediment of submarine mud volcano

characteristic: isolation source

text: 22.137333 N 120.31333333 E

characteristic: lat lon

text: Methanovulcanius yangii

text: pure isolate

characteristic: sample type

text: Microbe sample from Methanovulcanius yangii

text: type strain of Methanovulcanius yangii


characteristic: External Id

text: Gehrmann Laboratories (60#), Advanced Water Management Centre, The University of Queensland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: fna level

text: wild type

characteristic: genotype

text: 27 hours incubation after the standard inoculation

characteristic: incubation time

text: Nitratidesulfovibrio vulgaris str. Hildenborough

text: Bacteria

text: Hildenborough

text: type strain of Desulfovibrio vulgaris

characteristic: type material


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: 4 ug-N/L

text: wild type

text: 27 hours incubation after the standard inoculation, that is 1 hour after FNA addition

characteristic: organism

text: Bacteria

text: Hildenborough

characteristic: strain

characteristic: title

text: type strain of Desulfovibrio vulgaris


text: Baliga, Institute for Systems Biology

characteristic: INSDC secondary accession

text: live

text: Generic

text: sulfate respiration

characteristic: condition

characteristic: genotype/variation

text: Lactate/Sulfate

characteristic: medium

characteristic: replicate

text: bacteria

text: Hildenborough

characteristic: transition

text: type strain of Desulfovibrio vulgaris


characteristic: External Id

text: Baliga, Institute for Systems Biology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: syntrophy

text: Wild type

text: Lactate/No-Sulfate

text: bacteria

text: Hildenborough

text: type strain of Desulfovibrio vulgaris


text: Baliga, Institute for Systems Biology

text: live

characteristic: INSDC status

text: Generic

text: syntrophy

text: Lactate/No-Sulfate

text: bacteria

text: Hildenborough

text: type strain of Desulfovibrio vulgaris

characteristic: type material


text: Baliga, Institute for Systems Biology

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: sulfate respiration

text: Wild type

text: Lactate/Sulfate

text: bacteria

text: Hildenborough

text: type strain of Desulfovibrio vulgaris


text: University College Cork

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

characteristic: collection date

text: TRUE

characteristic: environmental sample

text: Ireland: Cork

characteristic: geo loc name

text: Homo sapiens

characteristic: host

characteristic: isolate

text: stool sample

characteristic: isolation source

text: 51.53 N 8.28 W

characteristic: lat lon

text: human gut metagenome

characteristic: metagenome source

text: TRUE

characteristic: metagenomic

text: This biosample is a metagenomic assembly obtained from the human gut metagenome BioSample: SAMN04577621

characteristic: note

text: Methanomethylophilus alvi

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Methanomethylophilus alvi


characteristic: External Id

text: Nagaoka University of Technology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: culture collection

text: Japan

text: soil

text: Piscinibacter gummiphilus

text: monoisolate

characteristic: strain

text: Natural rubber-degrading bacterium Rhizobacter gummiphilus NS21

characteristic: title

text: type strain of Rhizobacter gummiphilus