text: University of Zürich

text: live

text: Generic

text: wt

text: inside bean nodules

text: Phaseolus vulgaris

text: Paraburkholderia phymatum STM815

text: Pp STM815 bacteroid cells

text: STM815 wt in symbiosis with bean_1

text: type strain of Burkholderia phymatum


status: PUBLIC

characteristic: External Id

text: University of Zürich

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: SRA accession

text: wt

tag: attribute

characteristic: genotype

text: minimal medium 30 mM NH4

characteristic: growth medium

text: planktonic cells, OD600 equal 0.6

characteristic: growth phase

text: Paraburkholderia phymatum STM815

characteristic: organism

text: Pp STM815 planktonic cells

characteristic: strain

text: STM815 wt nitrogen replete_1

characteristic: title

text: type strain of Burkholderia phymatum

characteristic: type-material


text: University of Zürich

text: live

text: Generic

text: wt

text: minimal medium 0.5 mM NH4

text: planktonic cells, OD600 equal 0.4

text: Paraburkholderia phymatum STM815

text: Pp STM815 planktonic cells

text: STM815 wt nitrogen starved_1

text: type strain of Burkholderia phymatum


text: University of Zürich

text: live

text: Generic

text: wt

text: minimal medium 30 mM NH4

text: planktonic cells, OD600 equal 0.7

text: Paraburkholderia phymatum STM815

text: Pp STM815 planktonic cells

text: STM815 wt nitrogen replete_2

text: type strain of Burkholderia phymatum


Caulobacter segnis DSM 7131

text: Beijing Academy of Agriculture and Forestry Science

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

characteristic: collection date

characteristic: culture-collection

text: Genome sequencing and functional annotation will provide valuable information for taxonomy of the strain

characteristic: description

text: Japan:Tokyo

characteristic: geo loc name

text: maize

characteristic: host

text: soil

characteristic: isolation-source

text: Caulobacter segnis

text: whole organism

characteristic: sample type

text: DSM 7131

text: Microbe sample from Caulobacter segnis DSM 7131

text: type strain of Mycoplana segnis


characteristic: External Id

text: Belgian Nuclear Research Center

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: Belgium

characteristic: isolate

text: Cupriavidus metallidurans CH34

text: whole organism

text: Cupriavidus metallidurans CH34 Silver resistant strain

text: type strain of Ralstonia metallidurans


text: Edward Burress's shared submissions

text: live

text: Model organism or animal

characteristic: SRA accession

text: adult

characteristic: dev stage

text: Lugubria cf. johanna C238

characteristic: organism

text: not determined

characteristic: sex

text: fin clip

characteristic: tissue

text: Model organism or animal sample from Lugubria cf. johanna C238

characteristic: title


Sample d4

text: Fujian Agriculture and Forestry University

text: live

characteristic: NCBI submission package

characteristic: bz

characteristic: collection date

text: Keywords: GSC:MIxS;MIMS:6.0

characteristic: description

text: plateau

characteristic: env feature

text: soil

text: China:Yunnan

characteristic: geo loc name

text: Saccharum sp. complex hybrid

characteristic: host

text: root metagenome


Sample d5

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Keywords: GSC:MIxS;MIMS:6.0

text: plateau

text: soil

text: China:Yunnan

text: Saccharum sp. complex hybrid

text: root metagenome


Sample d6

text: live

characteristic: INSDC status

characteristic: SRA accession

text: Keywords: GSC:MIxS;MIMS:6.0

text: plateau

text: soil

text: China:Yunnan

text: Saccharum sp. complex hybrid

text: root metagenome


text: Loyola University Chicago

text: live

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: USA: Maywood, IL

text: Homo sapiens

text: Gardnerella pickettii

characteristic: organism

text: not appplicable

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Gardnerella pickettii

text: catheter


Paenibacillus chitinolyticus KCCM 41400

text: Kyungpook National University

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: Paenibacillus chitinolyticus KCCM 41400

text: Japan

text: chitin

characteristic: isolation source

text: Paenibacillus chitinolyticus

text: single cell

characteristic: sample type

text: KCCM 41400

text: Paenibacillus chitinolyticus KCCM 41400

characteristic: title

text: type strain of Bacillus chitinolyticus

characteristic: type-material


NBRC 13083

text: Institute of Microbiology, Chinese Academy of Sciences

text: live

text: Microbe, viral or environmental

text: United Kingdom

characteristic: geo loc name

text: Potato scab

text: Streptomyces albidoflavus

text: cell culture

text: NBRC 13083

text: Microbe sample from Streptomyces albidoflavus


DSM 40233

text: live

text: Microbe, viral or environmental

characteristic: culture-collection

text: Germany

text: potato

text: Streptomyces albidoflavus

text: cell culture

text: DSM 40233


characteristic: External Id

text: Pathology and Medical Biology, University Medical Center Groningen

text: live

text: Generic

text: Dermal fibroblast (LONZA CC-2511)

characteristic: cell type

text: anti-YAP: ab52771 (Abcam), Research Resource Identifier: AB_2219141

characteristic: chip antibody

text: Homo sapiens

text: Passage 9

characteristic: passage

text: HDF

text: control

characteristic: treatment


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Dermal fibroblast (LONZA CC-2511)

text: Homo sapiens

text: Passage 9

text: HDF

text: 5 ng TGFb1/mL for 24h


text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Dermal fibroblast (LONZA CC-2511)

text: Homo sapiens

characteristic: organism

text: Passage 9

text: HDF

text: control


name: Paraburkholderia rhynchosiae WSM 3937T_MicrobesNG8386

text: The James Hutton Institute

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.host-associated

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: Fynbos

characteristic: env biome

text: Savannah

characteristic: env feature

text: Plant

text: South Africa: Darling

text: Rhynchosia ferulifolia

characteristic: host

text: 33.292 S 18.442 E

characteristic: lat lon

text: missing data

text: Paraburkholderia rhynchosiae

text: de Meyer et al. (2018)

text: WSM 3937

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Paraburkholderia rhynchosiae

characteristic: title

text: type strain of Burkholderia rhynchosiae

characteristic: type-material


characteristic: External Id

text: University of Illinois at Urbana-Champaign

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: drinking water system-DS2

text: oligotrophic fast flowing

text: water

text: TRUE

characteristic: environmental sample

text: USA: Illinois, Champaign

characteristic: geo loc name

characteristic: isolate

text: drinking water system-DS2

characteristic: isolation-source

text: 40.10 N 88.28 W

text: freshwater metagenome

characteristic: metagenome source

text: TRUE

characteristic: metagenomic

text: This BioSample is a metagenomic assembly obtained from the freshwater metagenome BioSample: SAMN05159406

characteristic: note

text: Accumulibacter sp.

text: metagenomic assembly

characteristic: sample-type

text: MIGS Cultured Bacterial/Archaeal sample from Accumulibacter sp.


characteristic: INSDC last update

text: live

characteristic: INSDC status

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: drinking water system-PB2

characteristic: env biome

text: oligotrophic fast flowing

characteristic: env feature

text: water

text: TRUE

text: USA: Illinois, Champaign

text: drinking water system-PB2

text: 40.12 N 88.23 W

text: freshwater metagenome

text: TRUE

text: This BioSample is a metagenomic assembly obtained from the freshwater metagenome BioSample: SAMN05159412

text: Accumulibacter sp.

characteristic: organism

text: metagenomic assembly


characteristic: External Id

text: Taiyuan University Of Technology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

text: active sludge

characteristic: isolation source

text: 37.87 N 112.52 E

characteristic: lat lon

text: Paramagnetospirillum magneticum

text: Microbe sample from Paramagnetospirillum magneticum

characteristic: title


text: Cornell University

characteristic: INSDC last update

text: live

text: Plant

text: Kenong Xu/Andrea Patocchi

text: Progeny of Fiesta x Discovery

characteristic: cultivar

text: maturing

text: Switzerland: Wadenswil

text: FD1009 fruit 1

characteristic: isolate

text: Malus domestica

text: Fruit

characteristic: tissue

text: Illumina RNA-seq reads


text: Cornell University

text: live

characteristic: INSDC status

text: Plant

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Kenong Xu/Andrea Patocchi

text: Progeny of Fiesta x Discovery

text: maturing

text: Switzerland: Wadenswil

text: FD1009 fruit 2

text: Malus domestica

text: Fruit

text: Illumina RNA-seq reads


text: Cornell University

text: live

text: Plant

text: Kenong Xu/Andrea Patocchi

text: Progeny of Fiesta x Discovery

text: maturing

text: Switzerland: Wadenswil

text: FD1009 fruit 3

text: Malus domestica

text: Fruit

text: Illumina RNA-seq reads


text: Cornell University

text: live

text: Plant

text: Kenong Xu/Andrea Patocchi

text: Progeny of Fiesta x Discovery

text: maturing

text: Switzerland: Wadenswil

text: FD1065 fruit 1

text: Malus domestica

text: Fruit

text: Illumina RNA-seq reads


text: Cornell University

text: live

text: Plant

text: Kenong Xu/Andrea Patocchi

text: Progeny of Fiesta x Discovery

text: maturing

text: Switzerland: Wadenswil

text: FD1065 fruit 2

text: Malus domestica

text: Fruit

text: Illumina RNA-seq reads


text: Cornell University

text: live

text: Plant

text: Kenong Xu/Andrea Patocchi

text: Progeny of Fiesta x Discovery

text: maturing

text: Switzerland: Wadenswil

text: FD1100 fruit 1

text: Malus domestica

text: Fruit

text: Illumina RNA-seq reads


text: Cornell University

text: live

text: Plant

text: Kenong Xu/Andrea Patocchi

text: Progeny of Fiesta x Discovery

text: maturing

text: Switzerland: Wadenswil

text: FD1100 fruit 2

text: Malus domestica

text: Fruit

text: Illumina RNA-seq reads


text: Cornell University

text: live

text: Plant

text: Kenong Xu/Andrea Patocchi

text: Progeny of Fiesta x Discovery

text: maturing

text: Switzerland: Wadenswil

text: FD1100 fruit 3

text: Malus domestica

text: Fruit

text: Illumina RNA-seq reads


text: Cornell University

text: live

text: Plant

text: Kenong Xu/Andrea Patocchi

text: Progeny of Fiesta x Discovery

text: maturing

text: Switzerland: Wadenswil

text: FD1100 fruit 4

text: Malus domestica

text: Fruit

text: Illumina RNA-seq reads


text: Cornell University

text: live

text: Plant

text: Kenong Xu/Andrea Patocchi

text: Progeny of Fiesta x Discovery

text: maturing

text: Switzerland: Wadenswil

text: FD1175 fruit 1

text: Malus domestica

text: Fruit

text: Illumina RNA-seq reads


text: Cornell University

text: live

text: Plant

text: Kenong Xu/Andrea Patocchi

text: Progeny of Fiesta x Discovery

text: maturing

text: Switzerland: Wadenswil

text: FD1175 fruit 2

text: Malus domestica

text: Fruit

text: Illumina RNA-seq reads


text: Cornell University

text: live

text: Plant

text: Kenong Xu/Andrea Patocchi

text: Progeny of Fiesta x Discovery

text: maturing

text: Switzerland: Wadenswil

text: FD1221 fruit 1

text: Malus domestica

text: Fruit

text: Illumina RNA-seq reads


text: Cornell University

text: live

text: Plant

text: Kenong Xu/Andrea Patocchi

text: Progeny of Fiesta x Discovery

text: maturing

text: Switzerland: Wadenswil

text: FD1221 fruit 2

text: Malus domestica

text: Fruit

text: Illumina RNA-seq reads


text: Cornell University

text: live

text: Plant

text: Kenong Xu/Andrea Patocchi

text: Progeny of Fiesta x Discovery

text: maturing

text: Switzerland: Wadenswil

text: FD1225 fruit 1

text: Malus domestica

text: Fruit

text: Illumina RNA-seq reads


text: Cornell University

text: live

text: Plant

text: Kenong Xu/Andrea Patocchi

text: Progeny of Fiesta x Discovery

text: maturing

text: Switzerland: Wadenswil

text: FD1225 fruit 2

text: Malus domestica

text: Fruit

text: Illumina RNA-seq reads


text: Cornell University

text: live

text: Plant

text: Kenong Xu/Andrea Patocchi

text: Progeny of Fiesta x Discovery

text: maturing

text: Switzerland: Wadenswil

text: FD1225 fruit 3

text: Malus domestica

text: Fruit

text: Illumina RNA-seq reads


text: Cornell University

text: live

text: Plant

text: Kenong Xu/Andrea Patocchi

text: Progeny of Fiesta x Discovery

text: maturing

text: Switzerland: Wadenswil

text: FD1231 fruit 1

text: Malus domestica

text: Fruit

text: Illumina RNA-seq reads


text: Cornell University

text: live

text: Plant

text: Kenong Xu/Andrea Patocchi

text: Progeny of Fiesta x Discovery

text: maturing

text: Switzerland: Wadenswil

text: FD1231 fruit 2

text: Malus domestica

text: Fruit

text: Illumina RNA-seq reads


text: Cornell University

text: live

text: Plant

text: Kenong Xu/Andrea Patocchi

text: Progeny of Fiesta x Discovery

text: maturing

text: Switzerland: Wadenswil

text: FD1252 fruit 1

text: Malus domestica

text: Fruit

text: Illumina RNA-seq reads


text: Cornell University

text: live

text: Plant

text: Kenong Xu/Andrea Patocchi

text: Progeny of Fiesta x Discovery

text: maturing

text: Switzerland: Wadenswil

text: FD1252 fruit 2

text: Malus domestica

text: Fruit

text: Illumina RNA-seq reads


text: Cornell University

text: live

text: Plant

text: Kenong Xu/Andrea Patocchi

text: Progeny of Fiesta x Discovery

text: maturing

text: Switzerland: Wadenswil

text: FD1354 fruit 1

text: Malus domestica

text: Fruit

text: Illumina RNA-seq reads


text: Cornell University

text: live

text: Plant

text: Kenong Xu/Andrea Patocchi

text: Progeny of Fiesta x Discovery

text: maturing

text: Switzerland: Wadenswil

text: FD1354 fruit 2

text: Malus domestica

text: Fruit

text: Illumina RNA-seq reads


text: Chemistry, Massachusetts Institute of Technology

text: live

text: Generic

characteristic: cell line

text: Zn(II) Depleted Freestyle Medium repleted with Zn(II)

characteristic: culture medium

text: Homo sapiens

text: HEK293 Freestyle Cells

text: Repleted 3


characteristic: External Id

text: live

text: Generic

text: Homo sapiens

characteristic: organism

text: HEK293 Freestyle Cells

text: Repleted 2


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Homo sapiens

text: HEK293 Freestyle Cells

text: Repleted 1


characteristic: INSDC secondary accession

text: live

text: Generic

text: Zn(II) Depleted Freestyle Medium

text: Homo sapiens

text: HEK293 Freestyle Cells

text: Depleted 3


text: live

text: Generic

text: Zn(II) Depleted Freestyle Medium

text: Homo sapiens

text: HEK293 Freestyle Cells

text: Depleted 2


text: live

text: Generic

text: Zn(II) Depleted Freestyle Medium

text: Homo sapiens

text: HEK293 Freestyle Cells

text: Depleted 1


text: live

text: Generic

text: Untreated Freestyle Medium

text: Homo sapiens

text: HEK293 Freestyle Cells

text: Full 3


text: live

text: Generic

text: Untreated Freestyle Medium

text: Homo sapiens

text: HEK293 Freestyle Cells

text: Full 2


text: live

text: Generic

text: Untreated Freestyle Medium

text: Homo sapiens

text: HEK293 Freestyle Cells

text: Full 1


MphoT

text: Uppsala University

text: live

text: Microbe, viral or environmental

characteristic: collection date

characteristic: culture collection

text: France

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: human bronchial aspirate

characteristic: isolation source

text: Mycolicibacterium phocaicum

text: Cell culture

characteristic: sample type

text: DSM 45104

characteristic: strain

characteristic: temp

text: Microbe sample from Mycolicibacterium phocaicum

text: type strain of Mycobacterium phocaicum

characteristic: type-material


MaubT

text: Uppsala University

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: France: Marseille

text: Homo sapiens

text: bronchial aspiration

text: Mycolicibacterium aubagnense

text: Cell culture

text: DSM 45150

text: Microbe sample from Mycolicibacterium aubagnense

characteristic: title

text: type strain of Mycobacterium aubagnense


McosT

characteristic: External Id

text: Uppsala University

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: Venezuela

text: Homo sapiens

text: a granulomatous lesion of a female patient

text: Mycolicibacterium cosmeticum

characteristic: organism

text: Cell culture

text: DSM 44829

text: Microbe sample from Mycolicibacterium cosmeticum

text: type strain of Mycobacterium cosmeticum


text: UW-Madison

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: collection date

characteristic: culture collection

text: USA: Madison, Wisconsin

characteristic: geo loc name

text: Debaryomyces subglobosus

text: cell culture

text: NRRL Y-6666

text: Microbe sample from Debaryomyces subglobosus

text: type material of Eutorulopsis subglobosa


text: UW-Madison

text: live

text: Microbe, viral or environmental

text: USA: Madison, Wisconsin

text: Kregervanrija fluxuum

text: cell culture

characteristic: sample type

text: NRRL YB-4273

characteristic: strain

text: Microbe sample from Kregervanrija fluxuum

text: type material of Debaryomyces fluxuum


text: UW-Madison

text: live

text: Microbe, viral or environmental

text: USA: Madison, Wisconsin

text: Kregervanrija delftensis

text: cell culture

text: NRRL Y-7119

text: Microbe sample from Kregervanrija delftensis

text: type material of Pichia delftensis

characteristic: type-material


text: UW-Madison

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: USA: Madison, Wisconsin

text: Meyerozyma caribbica

text: cell culture

text: NRRL Y-27274

text: Microbe sample from Meyerozyma caribbica

text: type material of Pichia caribbica


text: UW-Madison

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: USA: Madison, Wisconsin

text: Torulaspora microellipsoides

text: cell culture

text: NRRL Y-1549

text: Microbe sample from Torulaspora microellipsoides

text: type material of Saccharomyces microellipsoides


text: UW-Madison

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: USA: Madison, Wisconsin

text: Yamadazyma scolyti

text: cell culture

text: NRRL Y-5512

text: Microbe sample from Yamadazyma scolyti

text: culture from type material of Endomycopsis scolyti


text: UW-Madison

text: live

text: Microbe, viral or environmental

text: USA: Madison, Wisconsin

text: Cyberlindnera petersonii

text: cell culture

text: NRRL YB-3808

text: Microbe sample from Cyberlindnera petersonii

text: culture from type material of Hansenula petersonii


text: UW-Madison

text: live

text: Microbe, viral or environmental

text: USA: Madison, Wisconsin

text: Priceomyces carsonii

text: cell culture

text: NRRL YB-4275

text: Microbe sample from Priceomyces carsonii

text: type material of Pichia carsonii


text: UW-Madison

text: live

text: Microbe, viral or environmental

text: USA: Madison, Wisconsin

text: Ambrosiozyma pseudovanderkliftii

text: cell culture

text: NRRL Y-63632

text: Microbe sample from Ambrosiozyma pseudovanderkliftii

text: type material of Candida pseudovanderkliftii


text: UW-Madison

text: live

text: Microbe, viral or environmental

text: USA: Madison, Wisconsin

text: Teunomyces cretensis

text: cell culture

text: NRRL Y-27777

text: Microbe sample from Teunomyces cretensis

text: type material of Candida cretensis


text: UW-Madison

text: live

text: Microbe, viral or environmental

text: USA: Madison, Wisconsin

text: Suhomyces emberorum

text: cell culture

text: NRRL Y-27606

text: Microbe sample from Suhomyces emberorum

text: type material of Candida emberorum


text: UW-Madison

text: live

text: Microbe, viral or environmental

text: USA: Madison, Wisconsin

text: Suhomyces canberraensis

text: cell culture

text: NRRL YB-2417

text: Microbe sample from Suhomyces canberraensis

text: type material of Candida canberraensis


text: UW-Madison

text: live

text: Microbe, viral or environmental

text: USA: Madison, Wisconsin

text: Suhomyces pyralidae

text: cell culture

text: NRRL Y-27085

text: Microbe sample from Suhomyces pyralidae

text: type material of Candida pyralidae


text: UW-Madison

text: live

text: Microbe, viral or environmental

text: USA: Madison, Wisconsin

text: Komagataella pseudopastoris

text: cell culture

text: NRRL Y-27603

text: Microbe sample from Komagataella pseudopastoris

text: culture from type material of Pichia pseudopastoris


text: UW-Madison

text: live

text: Microbe, viral or environmental

text: USA: Madison, Wisconsin

text: Ogataea glucozyma

text: cell culture

text: NRRL YB-2185

text: Microbe sample from Ogataea glucozyma

text: type material of Hansenula glucozyma


text: UW-Madison

text: live

text: Microbe, viral or environmental

text: USA: Madison, Wisconsin

text: Ogataea philodendri

text: cell culture

text: NRRL Y-7210

text: Microbe sample from Ogataea philodendri

text: culture from type material of Hansenula philodendri


text: UW-Madison

text: live

text: Microbe, viral or environmental

text: USA: Madison, Wisconsin

text: Ogataea pini

text: cell culture

text: NRRL Y-11528

text: Microbe sample from Ogataea pini

text: type material of Zygosaccharomyces pini


text: UW-Madison

text: live

text: Microbe, viral or environmental

text: USA: Madison, Wisconsin

text: Ogataea trehalophila

text: cell culture

text: NRRL Y-6781

text: Microbe sample from Ogataea trehalophila

text: type material of Pichia trehalophila


text: UW-Madison

text: live

text: Microbe, viral or environmental

text: USA: Madison, Wisconsin

text: Peterozyma xylosa

text: cell culture

text: NRRL Y-12939

text: Microbe sample from Peterozyma xylosa

text: type material of Pichia xylosa


text: UW-Madison

text: live

text: Microbe, viral or environmental

text: USA: Madison, Wisconsin

text: Priceomyces medius

text: cell culture

text: NRRL Y-7122

text: Microbe sample from Priceomyces medius

text: type material of Pichia media


text: UW-Madison

text: live

text: Microbe, viral or environmental

text: USA: Madison, Wisconsin

text: Starmera quercuum

text: cell culture

text: NRRL YB-4281

text: Microbe sample from Starmera quercuum

text: type material of Pichia quercuum


text: UW-Madison

text: live

text: Microbe, viral or environmental

text: USA: Madison, Wisconsin

text: Ambrosiozyma vanderkliftii

text: cell culture

text: NRRL Y-63633

text: Microbe sample from Ambrosiozyma vanderkliftii

text: type material of Candida vanderkliftii


text: UW-Madison

text: live

text: Microbe, viral or environmental

text: USA: Madison, Wisconsin

text: Ambrosiozyma ambrosiae

text: cell culture

text: NRRL Y-7524

text: Microbe sample from Ambrosiozyma ambrosiae

text: type material of Pichia ambrosiae


text: University of Zurich

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: Switzerland

text: bacterial culture

characteristic: isolation source

text: Mixta calida

text: chromosomal DNA

text: DSM 22759

text: DNA sample from Pantoea calida

text: type strain of Pantoea calida


text: Uppsala University, Department of Cell and Molecular Biology

text: live

text: Generic

characteristic: SRA accession

text: SOAPdenovo v. 1.05

characteristic: assembly method

characteristic: assembly name

text: AMDB

characteristic: common name

text: Spain

characteristic: country

characteristic: culture-collection

characteristic: genome coverage

text: sputum from asymptomatic patient

characteristic: isolation-source

text: Homo sapiens

characteristic: nat-host

text: Illumina HiSeq

characteristic: sequencing technology

text: DSM 44476

text: Sample from Mycolicibacterium mageritense DSM 44476 = CIP 104973

characteristic: title

text: type strain of Mycobacterium mageritense


characteristic: External Id

text: CSIR-Centre for Cellular and Molecular Biology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: growth stage

text: Size selected tRNA

characteristic: molecule subtype

text: Saccharomyces cerevisiae

characteristic: organism

text: spt16-197, Log-phase cells in the 1X YEP with 2% dextrose

characteristic: strain

text: tRNA-HySeq, spt16-197 rep1


characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Size selected tRNA

text: Saccharomyces cerevisiae

text: YM1729, Log-phase cells in the 1X YEP with 2% dextrose

text: tRNA-HySeq, WT rep1


Ruminococcus gnavus ATCC 29149

text: Kyungpook National University

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: USA

characteristic: geo loc name

text: feces

characteristic: isolation source

text: Mediterraneibacter gnavus ATCC 29149

text: single cell

characteristic: sample type

text: ATCC 29149

text: Microbe sample from [Ruminococcus] gnavus

text: type strain of Ruminococcus gnavus

characteristic: type material


characteristic: External Id

text: The University of Hong Kong

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: Porphyromonas gingivalis ATCC 33277

text: bacterial culture

text: ATCC 33277

text: Microbe sample from Porphyromonas gingivalis ATCC 33277

characteristic: title

text: control 30 min

characteristic: treatment

text: type strain of Bacteroides gingivalis

characteristic: type-material


text: The University of Hong Kong

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

text: Porphyromonas gingivalis ATCC 33277

characteristic: organism

text: bacterial culture

text: ATCC 33277

text: control 1h

text: type strain of Bacteroides gingivalis


text: The University of Hong Kong

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: Porphyromonas gingivalis ATCC 33277

text: bacterial culture

text: ATCC 33277

characteristic: strain

text: control 3h

text: type strain of Bacteroides gingivalis


text: The University of Hong Kong

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Porphyromonas gingivalis ATCC 33277

text: bacterial culture

text: ATCC 33277

text: control 6h

text: type strain of Bacteroides gingivalis


text: The University of Hong Kong

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: Porphyromonas gingivalis ATCC 33277

text: bacterial culture

text: ATCC 33277

text: Bi treated 30 min

text: type strain of Bacteroides gingivalis


text: The University of Hong Kong

text: live

text: Microbe, viral or environmental

text: Porphyromonas gingivalis ATCC 33277

text: bacterial culture

characteristic: sample type

text: ATCC 33277

text: Bi treated 1h

text: type strain of Bacteroides gingivalis


text: The University of Hong Kong

text: live

text: Microbe, viral or environmental

text: Porphyromonas gingivalis ATCC 33277

text: bacterial culture

text: ATCC 33277

text: Bi treated 3h

text: type strain of Bacteroides gingivalis


text: The University of Hong Kong

text: live

text: Microbe, viral or environmental

text: Porphyromonas gingivalis ATCC 33277

text: bacterial culture

text: ATCC 33277

text: Bi treated 6h

text: type strain of Bacteroides gingivalis


SURF MAG 60

text: University of Southern California

text: live

text: Microbe, viral or environmental

text: TRUE

characteristic: environmental sample

text: USA: South Dakota, Sanford Underground Research Facility

characteristic: geo loc name

characteristic: isolate

text: deeply circulating subsurface aquifer fluids

characteristic: isolation source

text: Firmicutes Desulforudis

characteristic: label

text: 44.352157 N 103.750503 W

characteristic: lat lon

text: Successfully loaded

characteristic: message

text: subsurface metagenome

characteristic: metagenome source

text: TRUE

characteristic: metagenomic

text: This BioSample is a metagenomic assembly obtained from the subsurface metagenome BioSamples: SAMN06064269, SAMN06064270

characteristic: note

text: Desulforudis sp.

text: SURF MAG 60

characteristic: sample name

text: metagenomic assembly

text: Microbe sample from Desulforudis sp.


Neorhizobium huautlense DSM 21817

characteristic: External Id

text: Centre for Plant Biotechnology and Genomics UPM-INIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: culture collection

text: Germany

text: Sesbania herbacea

characteristic: host

text: nodule

text: Neorhizobium huautlense

characteristic: organism

text: Bacterial type strain

text: DSM 21817

characteristic: strain

text: Microbe sample from Neorhizobium huautlense

characteristic: title

text: type strain of Rhizobium huautlense

characteristic: type-material


Neorhizobium alkalisoli DSM 21826

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: collection date

text: Germany

characteristic: geo loc name

text: Caragana korshinskii

text: nodule

characteristic: isolation source

text: Neorhizobium alkalisoli

text: Bacterial type strain

characteristic: sample type

text: DSM 21826

text: Microbe sample from Neorhizobium alkalisoli

text: type strain of Rhizobium alkalisoli


characteristic: External Id

text: University College Dublin

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

text: lab strain

text: Pichia kudriavzevii

text: Pichia kudriavzevii CBS573

text: type material of Saccharomyces krusei


Rgnavus

text: Icahn School of Medicine at Mount Sinai

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: biomaterial provider

characteristic: culture-collection

text: This BioSample represents a single pure culture. These same reads were used to create the mixed sample in BioSample SAMN05780989.

characteristic: note

text: Mediterraneibacter gnavus ATCC 29149

text: pure culture

text: ATCC 29149

text: Microbe sample from Mediterraneibacter gnavus ATCC 29149

text: type strain of Ruminococcus gnavus

characteristic: type material


text: live

text: Generic

characteristic: NCBI submission model

characteristic: growth stage

text: size selected tRNA

characteristic: molecule subtype

text: Saccharomyces cerevisiae

characteristic: organism

text: Spt16_197, Log-phase cells in the 1X YEP with 2% dextrose

characteristic: strain

text: tRNA-HySeq, Spt16_197 rep2

characteristic: title


text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Log-phase cells in the 1X YEP with 2% dextrose

text: size selected tRNA

text: Saccharomyces cerevisiae

text: tRNA-HySeq, WT rep2


characteristic: External Id

text: Japan Agency for Marine-Earth Science and technology

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

characteristic: collection date

characteristic: culture collection

text: USA: Illinois

characteristic: geo loc name

text: River

characteristic: isolation source

text: Malikia spinosa

text: cell culture

characteristic: sample type

text: Microbe sample from Malikia spinosa

text: type strain of Pseudomonas spinosa

characteristic: type-material


text: International Centre for Genetic Engineering and Biotechnology

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: RNA from late log phase of Erwinia toletana DAPP-PG 735 biological replicate 1

characteristic: description

text: Normal genotype

characteristic: genotype

text: Italy:Apulia

text: Olea europaea

text: Winslowiella toletana DAPP-PG 735

text: biological replicate 1

characteristic: replicate

text: RNA late log pahse

text: DAPP-PG 735

text: WT


text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: RNA from late log phase of Erwinia toletana DAPP-PG 735 biological replicate 2

text: Normal genotype

text: Italy:Apulia

text: Olea europaea

text: Winslowiella toletana DAPP-PG 735

characteristic: organism

text: biological replicate 2

text: RNA late log phase

text: DAPP-PG 735

characteristic: strain

text: WT

characteristic: title


characteristic: External Id

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

characteristic: collection date

text: RNA from late log phase of Erwinia toletana DAPP-PG 735 biological replicate 3

text: Normal genotype

text: Italy:Apulia

text: Olea europaea

text: Winslowiella toletana DAPP-PG 735

text: biological replicate 3

text: RNA late log phase

text: DAPP-PG 735

text: WT


text: live

text: Microbe, viral or environmental

text: RNA from late log phase of Erwinia toletana ETOI mutant biological replicate 1

text: Deletion etoI mutant of ET DAPP-PG735

text: Italy:Apulia

characteristic: geo loc name

text: Olea europaea

characteristic: isolation source

text: Winslowiella toletana

text: biological replicate 1

text: RNA late log pahse

characteristic: sample type

text: DAPP-PG ETETOI

text: ETOI mut


characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

text: RNA from late log phase of Erwinia toletana ETOI mutant biological replicate 2

text: Deletion etoI mutant of ET DAPP-PG735

text: Italy:Apulia

text: Olea europaea

text: Winslowiella toletana

text: biological replicate 2

text: RNA late log phase

text: DAPP-PG ETETOI

text: ETOI mut


text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: RNA from late log phase of Erwinia toletana ETOI mutant biological replicate 3

characteristic: description

text: Deletion etoI mutant of ET DAPP-PG735

characteristic: genotype

text: Italy:Apulia

text: Olea europaea

text: Winslowiella toletana

text: biological replicate 3

text: RNA late log phase

text: DAPP-PG ETETOI

text: ETOI mut


text: Univ Estadual Paulista UNESP/FCAV

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Brazil

text: soil

text: Mesorhizobium loti

text: culture

text: LMG 6125

text: Microbe sample from Mesorhizobium C02_LMG6125

text: type strain of Rhizobium loti

characteristic: type-material


text: University of Zürich

text: live

text: Generic

text: rpoN mutant

text: nodules harvested 21 days post infection

characteristic: growth

text: inside bean nodules

characteristic: medium

text: Paraburkholderia phymatum STM815

characteristic: organism

text: STM815 wt in symbiosis with bean

characteristic: strain

text: bacteroid cells

characteristic: tissue

characteristic: title

text: type strain of Burkholderia phymatum


characteristic: External Id

text: University of Zürich

characteristic: INSDC center name

text: live

text: Generic

characteristic: SRA accession

text: wt

text: inside bean nodules

text: Paraburkholderia phymatum STM815

text: STM815 wt in symbiosis with bean

text: bacteroid cells

text: type strain of Burkholderia phymatum


text: Northern Arizona University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: USA: Arizona

characteristic: geo loc name

text: Prairie dog

characteristic: host

text: lung

characteristic: isolation source

text: Arthroderma sp. PD_2

text: fungal isolate

characteristic: sample type

text: Microbe sample from Arthroderma sp. PD_2


text: Northern Arizona University

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: USA: Arizona

text: Prairie dog

text: lung

text: Emmonsiellopsis sp. PD_5

text: fungal isolate

text: Microbe sample from Emmonsiellopsis sp. PD_5


text: Northern Arizona University

text: live

text: Microbe, viral or environmental

text: USA: Arizona

text: Prairie dog

text: lung

text: Onygenales sp. PD_10

characteristic: organism

text: fungal isolate

text: Microbe sample from Onygenales sp. PD_10


text: Northern Arizona University

text: live

text: Microbe, viral or environmental

text: USA: Arizona

text: Prairie dog

text: lung

text: Onygenales sp. PD_12

text: fungal isolate

characteristic: strain

text: Microbe sample from Onygenales sp. PD_12


text: Northern Arizona University

text: live

text: Microbe, viral or environmental

text: USA: Arizona

text: Prairie dog

text: lung

text: Emmonsiellopsis sp. PD_33

text: fungal isolate

text: Microbe sample from Emmonsiellopsis sp. PD_33


text: Northern Arizona University

text: live

text: Microbe, viral or environmental

text: USA: Arizona

text: Prairie dog

text: lung

text: Arachnomyces sp. PD_36

text: fungal isolate

text: Microbe sample from Arachnomyces sp. PD_36


text: Northern Arizona University

text: live

text: Microbe, viral or environmental

text: USA: Arizona

text: Prairie dog

text: lung

text: Onygenales sp. PD_40

text: fungal isolate

text: Microbe sample from Onygenales sp. PD_40


text: Northern Arizona University

text: live

text: Microbe, viral or environmental

text: USA: Arizona

text: Prairie dog

text: lung

text: Myotisia sp. PD_48

text: fungal isolate

text: Microbe sample from Myotisia sp. PD_48


tag: Namespace:DOE Joint Genome Institute

text: DOE Joint Genome Institute

text: live

characteristic: culture-collection

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: Russia

text: Methanothermobacter defluvii

text: DSM 7466

text: Methanothermobacter defluvii DSM 7466

text: type strain of Methanobacterium defluvii

characteristic: type-material


characteristic: External Id

text: DOE Joint Genome Institute

characteristic: INSDC center name

text: live

text: Keywords: GSC:MIxS;MIGS:6.0

text: DSM 3183

text: Blastomonas natatoria DSM 3183

characteristic: title

text: type strain of Blastobacter natatorius


BH

text: KU Leuven

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

text: DSMZ (www.dsmz.de/)

characteristic: biomaterial provider

characteristic: collection date

characteristic: culture collection

text: France

text: Homo sapiens

text: feces

text: Blautia hydrogenotrophica

text: Cell culture

text: Microbe sample from Blautia hydrogenotrophica

text: type strain of Ruminococcus hydrogenotrophicus


text: DOE Joint Genome Institute

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Keywords: GSC:MIxS;MIGS:6.0

text: Mesorhizobium loti

text: DSM 2626

text: Mesorhizobium loti DSM 2626

text: type strain of Rhizobium loti


text: DOE Joint Genome Institute

text: live

characteristic: NCBI submission package

text: Keywords: GSC:MIxS;MIGS:6.0

text: Spain:Cabo de Gata, Almeria, southern Spain

characteristic: geo loc name

text: 36.78 N 2.24 W

characteristic: lat lon

text: Kushneria indalinina DSM 14324

text: DSM 14324

text: Kushneria indalinina DSM 14324

text: type strain of Halomonas indalinina


text: DOE Joint Genome Institute

text: live

characteristic: culture-collection

text: Keywords: GSC:MIxS;MIGS:6.0

text: Kushneria marisflavi

characteristic: organism

text: DSM 15357

characteristic: strain

text: Kushneria marisflavi DSM 15357

text: type strain of Halomonas marisflavi


characteristic: External Id

text: DOE Joint Genome Institute

text: live

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: USA:Georgia coast

text: Ruegeria pomeroyi DSS-3

text: Ruegeria pomeroyi DSS-3 Transposon library T8repB_JGI

text: type strain of Silicibacter pomeroyi

characteristic: type-material


text: DOE Joint Genome Institute

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Keywords: GSC:MIxS;MIGS:6.0

text: Antarctica:East Antarctica, Ekho Lake, Vestfold Hills

text: Sulfitobacter guttiformis

text: DSM 11458

text: Sulfitobacter guttiformis DSM 11458

characteristic: title

text: type strain of Staleya guttiformis


text: DOE Joint Genome Institute

characteristic: INSDC last update

text: live

characteristic: SRA accession

text: Keywords: GSC:MIxS;MIGS:6.0

text: USA:Georgia coast

text: Ruegeria pomeroyi DSS-3

text: Ruegeria pomeroyi DSS-3 Transposon library T0-A

text: type strain of Silicibacter pomeroyi


text: DOE Joint Genome Institute

text: live

text: Keywords: GSC:MIxS;MIGS:6.0

text: Australia: Southeast Queensland

text: Frondihabitans australicus

text: DSM 17894

text: Frondihabitans australicus DSM 17894

text: type strain of Frondicola australicus


text: DOE Joint Genome Institute

text: live

text: Keywords: GSC:MIxS;MIGS:6.0

text: China: Nantong, Jiangsu province

text: 32.03 N 120.83 E

text: Gemmobacter caeni

text: DSM 21823

text: Gemmobacter caeni DSM 21823

text: type strain of Catellibacterium caeni


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

characteristic: NCBI submission model

text: Keywords: GSC:MIxS;MIGS:6.0

text: USA:Georgia coast

text: Ruegeria pomeroyi DSS-3

text: Ruegeria pomeroyi DSS-3 Transposon library T0-B

text: type strain of Silicibacter pomeroyi


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: USA:Georgia coast

text: Ruegeria pomeroyi DSS-3

text: Ruegeria pomeroyi DSS-3 Transposon library T0-C

text: type strain of Silicibacter pomeroyi


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: USA:Georgia coast

text: Ruegeria pomeroyi DSS-3

text: Ruegeria pomeroyi DSS-3 Transposon library T8repC_JGI

text: type strain of Silicibacter pomeroyi


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: USA:Georgia coast

text: Ruegeria pomeroyi DSS-3

text: Ruegeria pomeroyi DSS-3 Transposon library T8repA_Jun

text: type strain of Silicibacter pomeroyi


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: USA:Georgia coast

text: Ruegeria pomeroyi DSS-3

text: Ruegeria pomeroyi DSS-3 Transposon library T8repB_Jun

text: type strain of Silicibacter pomeroyi


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: USA:Georgia coast

text: Ruegeria pomeroyi DSS-3

text: Ruegeria pomeroyi DSS-3 Transposon library T8repC_Jun

text: type strain of Silicibacter pomeroyi


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: USA:Georgia coast

text: Ruegeria pomeroyi DSS-3

text: Ruegeria pomeroyi DSS-3 Transposon library T8repA_JGI

text: type strain of Silicibacter pomeroyi


Actinotalea fermentans JCM 9966

text: Dalian University of Technology

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: JCM 9966 is the type strain of Actinotalea fermentans.

text: France: Essone, Montaubert

text: Municipal dumping ground

characteristic: isolation source

text: Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133

text: cell culture

characteristic: sample type

text: JCM 9966

text: Actinotalea fermentans type strain JCM 9966

text: type strain of Cellulomonas fermentans


text: Bavarian Health and Food Safety Authority

text: live

characteristic: INSDC status

text: Institute Pasteur, Paris, France

characteristic: collected by

characteristic: genotype

text: France

characteristic: geo loc name

text: Ixodes ricinus

characteristic: host

text: Lyme borreliosis

characteristic: host disease

text: tick found on bird

text: Borreliella garinii

text: Pathogen: clinical or host-associated sample from Borreliella garinii

text: type strain of Borrelia garinii


characteristic: External Id

text: Shandong University

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

characteristic: culture-collection

text: Spain: western Mediterranean Sea off Vinaros coast

text: seawater

text: Parahaliea mediterranea

characteristic: organism

text: cell culture

text: DSM 21924

characteristic: strain

text: Microbe sample from Parahaliea mediterranea

text: type strain of Haliea mediterranea


text: DOE Joint Genome Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: MIGS.eu

text: Scheffersomyces queiroziae UFMG-CLM-5.1 Transcriptome; Cultures grown on glucose

characteristic: description

text: Scheffersomyces queiroziae

text: Scheffersomyces queiroziae UFMG-CLM-5.1 Transcriptome - 291

characteristic: title

text: type material of Candida queiroziae

characteristic: type material


text: DOE Joint Genome Institute

text: live

characteristic: INSDC status

text: MIGS.eu

characteristic: NCBI submission model

characteristic: SRA accession

text: Scheffersomyces stipitis NRRL Y-7124 Transcriptome; Cultures grown on glucose

text: Scheffersomyces stipitis

text: NRRL Y-7124

text: Scheffersomyces stipitis NRRL Y-7124 Transcriptome - 5E11

text: culture from type material of Pichia stipitis

characteristic: type-material


text: DOE Joint Genome Institute

text: live

text: Keywords: GSC:MIxS;MIGS:6.0

text: Finland: Helsinki

characteristic: geo loc name

text: 60.18 N 24.93 E

characteristic: lat lon

text: Roseateles toxinivorans

text: DSM 16998

text: Paucibacter toxinivorans DSM 16998

text: type strain of Paucibacter toxinivorans


characteristic: External Id

text: DOE Joint Genome Institute

text: live

text: MIGS.eu

characteristic: NCBI submission package

text: Keywords: GSC:MIxS;MIGS:6.0

text: Scheffersomyces stipitis

text: NRRL Y-7124

text: Scheffersomyces stipitis NRRL Y-7124 Standard Draft


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

characteristic: culture-collection

text: Keywords: GSC:MIxS;MIGS:6.0

text: Asanoa ferruginea

characteristic: organism

text: DSM 44099

text: Asanoa ferruginea DSM 44099

text: type strain of Catellatospora ferruginea


text: DOE Joint Genome Institute

characteristic: INSDC center name

text: live

text: MIGS.eu

text: Keywords: GSC:MIxS;MIGS:6.0

text: Aspergillus caninus

text: CBS 128032

characteristic: strain

text: Aspergillus caninus CBS 128032 Transcriptome

text: type material of Phialosimplex caninus


text: DOE Joint Genome Institute

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: MIGS.eu

text: Keywords: GSC:MIxS;MIGS:6.0

text: Aspergillus latus

text: CBS 492.65

text: Aspergillus latus CBS 492.65 Transcriptome

text: culture from holotype of Aspergillus nidulans var. latus


text: DOE Joint Genome Institute

characteristic: INSDC secondary accession

text: live

text: MIGS.eu

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: Naohidea sebacea

text: CBS 8477

text: Naohidea sebacea CBS 8477 (P95)

text: reference material of Dacrymyces sebaceus


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Spain:Seawater from larval cultures of the scallop Pecten maximus, in A Coruna, Galicia, Spain

text: 43.371491 N 8.39597 W

text: Phaeobacter gallaeciensis

text: Phaeobacter gallaeciensis BS107 rich smRNA

characteristic: title

text: type strain of Roseobacter gallaeciensis


text: DOE Joint Genome Institute

text: live

characteristic: INSDC status

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Noviherbaspirillum canariense

text: CECT 7838

text: Noviherbaspirillum canariensis CECT 7838

text: type strain of Herbaspirillum canariense


text: DOE Joint Genome Institute

text: live

text: MIGS.eu

characteristic: NCBI submission model

text: Keywords: GSC:MIxS;MIGS:6.0

text: Aspergillus cejpii

text: CBS 157.66

text: Aspergillus cejpii CBS 157.66 Transcriptome

text: culture from type material of Talaromyces cejpii


text: DOE Joint Genome Institute

text: live

text: MIGS.eu

characteristic: SRA accession

text: Keywords: GSC:MIxS;MIGS:6.0

text: Lichtheimia hyalospora

text: FSU 10163

text: Lichtheimia hyalospora FSU 10163

text: culture from neotype of Tieghemella hyalospora


text: DOE Joint Genome Institute

text: live

text: Keywords: GSC:MIxS;MIGS:6.0

text: Falsibacillus pallidus

text: DSM 25281

text: Falsibacillus pallidus DSM 25281

text: type strain of Bacillus pallidus

characteristic: type-material


text: DOE Joint Genome Institute

text: live

text: Keywords: GSC:MIxS;MIGS:6.0

text: Halopolyspora algeriensis

text: CECT 8575

text: Halopolyspora algeriensis CECT 8575

text: type strain of Mzabimyces algeriensis


text: DOE Joint Genome Institute

text: live

text: Keywords: GSC:MIxS;MIGS:6.0

text: Roseateles asaccharophilus

text: DSM 25082

text: Kinneretia asaccharophila DSM 25082

text: type strain of Kinneretia asaccharophila

characteristic: type material


text: DOE Joint Genome Institute

text: live

text: MIGS.eu

text: Spathaspora arborariae UFMG-HMD-19.1 Transcriptome; Cultures grown on glucose

text: Spathaspora arborariae

text: Spathaspora arborariae UFMG-HMD-19.1 Transcriptome - 294


text: Zhang lab, School of BioMedical Sciences, Hunan University

text: live

text: Generic

text: AR+

characteristic: ar status

text: Prostate cancer

characteristic: cancer type

text: LNCaP

characteristic: cell line

characteristic: growth condition

text: Homo sapiens

text: Prostate cancer cell line


characteristic: External Id

text: live

text: Generic

characteristic: NCBI submission package

text: AR+

text: Prostate cancer

text: LNCaP

text: FBS+DMSO

text: Homo sapiens

characteristic: organism

text: Prostate cancer cell line


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: AR-

text: Prostate cancer

text: Homo sapiens

text: Prostate cancer cell line


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: AR-

text: Prostate cancer

text: FBS+DMSO

text: Homo sapiens

text: Prostate cancer cell line


text: University of Puerto Rico at Mayaguez

text: live

text: MIGS.eu

text: free living

characteristic: biotic relationship

characteristic: culture collection

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

characteristic: estimated size

text: Debaryomyces hansenii

text: haploid

characteristic: ploidy

text: eukaryote: asexual

characteristic: propagation

text: NRRL Y-7426

characteristic: strain

text: MIGS Eukaryotic sample from Debaryomyces hansenii

characteristic: title

text: culture from type material of Saccharomyces hansenii


text: McMaster University

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: SRA accession

characteristic: collection date

text: USA: New York, Williams Hotel Mine

characteristic: geo loc name

text: Myotis lucifugus

characteristic: host

text: 41.86408 N 74.081798 W

characteristic: lat lon

text: Pseudogymnoascus destructans

text: single cell

characteristic: sample type

text: Microbe sample from Pseudogymnoascus destructans

text: culture from type material of Geomyces destructans

characteristic: type-material


Gracilibacillus dipsosauri strain DD1

characteristic: External Id

text: Arizona State University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: USA: Las Vegas

text: Dipsosaurus dorsalis (desert iguana)

text: nasal passages

characteristic: isolation source

text: Gracilibacillus dipsosauri

characteristic: organism

text: cell culture

text: Microbe sample from Gracilibacillus dipsosauri

text: type strain of Bacillus dipsosauri


name: CY03 in the surface marine sediment sample

text: Qingdao Agricultural University

text: live

text: Microbe, viral or environmental

text: China: Yellow Sea

text: marine sediment

text: Pseudooceanicola sediminis

text: cell culture

characteristic: strain

text: Microbe sample from Pseudooceanicola sediminis

characteristic: title

text: type strain of Pseudopuniceibacterium sediminis

characteristic: type material


text: Chemistry, Massachusetts Institute of Technology

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: SRA accession

text: Human Embryonic Kidney (HEK) 293T-Rex

characteristic: cell line

text: 24h 0.01% DMSO treatment, 39C

characteristic: condition

text: Clonal; stably expressing DHFR.ATF6, Tet-XBP1s, and the tetracycline repressor

characteristic: genotype

text: Homo sapiens

text: Human Embryonic Kidney (HEK) 293T-Rex Cells

text: Adult-derived epithelial cell line

characteristic: tissue

text: D17-188012: Basal 39C, Rep3


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: Human Embryonic Kidney (HEK) 293T-Rex

text: 24h 0.01% DMSO treatment, 39C

text: Homo sapiens

text: Adult-derived epithelial cell line

text: D17-188011: Basal 39C, Rep2


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Human Embryonic Kidney (HEK) 293T-Rex

text: 24h 0.01% DMSO treatment, 39C

text: Homo sapiens

text: Adult-derived epithelial cell line

text: D17-188010: Basal 39C, Rep1


text: live

text: Generic

text: Human Embryonic Kidney (HEK) 293T-Rex

text: 24h 0.1 ug/mL doxycycline + 1 uM trimethoprim, 37C

text: Homo sapiens

text: Adult-derived epithelial cell line

text: D17-188009: ATF6f/XBP1s 37C, Rep3


text: live

text: Generic

text: Human Embryonic Kidney (HEK) 293T-Rex

text: Homo sapiens

text: Adult-derived epithelial cell line

text: D17-188008: ATF6f/XBP1s 37C, Rep2


text: live

text: Generic

text: Human Embryonic Kidney (HEK) 293T-Rex

text: Homo sapiens

text: Adult-derived epithelial cell line

text: D17-188007: ATF6f/XBP1s 37C, Rep1


text: live

text: Generic

characteristic: NCBI submission package

text: Human Embryonic Kidney (HEK) 293T-Rex

text: 24h 0.1 ug/mL doxycycline + 1 uM trimethoprim, 39C

text: Homo sapiens

text: Adult-derived epithelial cell line

text: D17-8510: ATF6f/XBP1s 39C, Rep2


text: live

text: Generic

text: Human Embryonic Kidney (HEK) 293T-Rex

text: Homo sapiens

characteristic: organism

text: Adult-derived epithelial cell line

text: D17-8509: ATF6f/XBP1s 39C, Rep1


text: live

text: Generic

text: Human Embryonic Kidney (HEK) 293T-Rex

text: 24h 0.1 ug/mL doxycycline, 39C

text: Homo sapiens

text: Adult-derived epithelial cell line

text: D17-188015: XBP1s 39C, Rep3


text: live

text: Generic

text: Human Embryonic Kidney (HEK) 293T-Rex

text: 24h 0.1 ug/mL doxycycline, 39C

text: Homo sapiens

text: Adult-derived epithelial cell line

text: D17-188014: XBP1s 39C, Rep2


text: live

text: Generic

text: Human Embryonic Kidney (HEK) 293T-Rex

text: 24h 0.1 ug/mL doxycycline, 37C

text: Homo sapiens

text: Adult-derived epithelial cell line

text: D17-188006: XBP1s 37C, Rep3


text: live

text: Generic

text: Human Embryonic Kidney (HEK) 293T-Rex

text: 24h 0.1 ug/mL doxycycline, 37C

text: Homo sapiens

text: Adult-derived epithelial cell line

text: D17-188005: XBP1s 37C, Rep2


text: live

text: Generic

text: Human Embryonic Kidney (HEK) 293T-Rex

text: 24h 0.1 ug/mL doxycycline, 37C

text: Homo sapiens

text: Adult-derived epithelial cell line

text: D17-188004: XBP1s 37C, Rep1


text: live

text: Generic

text: Human Embryonic Kidney (HEK) 293T-Rex

text: 24h 0.01% DMSO treatment, 37C

text: Homo sapiens

text: Adult-derived epithelial cell line

text: D17-188003: Basal 37C, Rep3


text: live

text: Generic

text: Human Embryonic Kidney (HEK) 293T-Rex

text: 24h 0.01% DMSO treatment, 37C

text: Homo sapiens

text: Adult-derived epithelial cell line

text: D17-188002: Basal 37C, Rep2


text: live

text: Generic

text: Human Embryonic Kidney (HEK) 293T-Rex

text: 24h 0.01% DMSO treatment, 37C

text: Homo sapiens

text: Adult-derived epithelial cell line

text: D17-188001: Basal 37C, Rep1


text: live

text: Generic

text: Human Embryonic Kidney (HEK) 293T-Rex

text: Homo sapiens

text: Adult-derived epithelial cell line

text: D17-8511: ATF6f/XBP1s 39C, Rep3


text: live

text: Generic

text: Human Embryonic Kidney (HEK) 293T-Rex

text: 24h 0.1 ug/mL doxycycline, 39C

text: Homo sapiens

text: Adult-derived epithelial cell line

text: D17-188013: XBP1s 39C, Rep1


Pelagibacter phage HTVC022P

text: Fujian Agriculture and Forestry University

text: live

text: Viral

characteristic: collection date

text: China

characteristic: geo loc name

text: Candidatus Pelagibacter ubique HTCC1062

characteristic: host

characteristic: isolate

text: seawater

characteristic: isolation source

text: Phage HTVC021

text: Viral sample from Phage HTVC021


text: shengyang Agricultural university

text: live

characteristic: INSDC status

text: Plant

characteristic: NCBI submission model

text: LH

characteristic: cultivar

text: mature

characteristic: dev stage

text: major

characteristic: forma

text: China: shenyang

text: Crataegus pinnatifida f. major

text: leaf

text: Plant sample from Crataegus pinnatifida. var. major LH-1

characteristic: title

text: major

characteristic: variety


characteristic: External Id

text: shengyang Agricultural university

characteristic: INSDC center name

text: live

text: Plant

characteristic: SRA accession

text: LH

text: mature

text: major

text: China: shenyang

text: Crataegus pinnatifida f. major

text: leaf

characteristic: tissue

text: Plant sample from Crataegus pinnatifida var. major LH-2

text: major


text: shengyang Agricultural university

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Plant

characteristic: NCBI submission package

text: LH

text: mature

text: major

text: China: shenyang

text: Crataegus pinnatifida f. major

characteristic: organism

text: leaf

text: Plant sample from Crataegus pinnatifida var. major

text: major


text: shengyang Agricultural university

text: live

text: Plant

text: LH

text: mature

text: major

text: China: shenyang

characteristic: geo loc name

text: Crataegus pinnatifida f. major

text: leaf

text: major


text: shengyang Agricultural university

text: live

characteristic: INSDC status

text: Plant

text: HG

text: mature

text: major

text: China: shenyang

text: Crataegus pinnatifida f. major

text: leaf

text: major


text: shengyang Agricultural university

text: live

text: Plant

characteristic: NCBI submission model

text: HG

text: mature

text: major

text: China: shenyang

text: Crataegus pinnatifida f. major

text: leaf

text: major


text: shengyang Agricultural university

text: live

text: Plant

text: XHMZ

characteristic: cultivar

text: mature

text: major

text: China: shenyang

text: Crataegus pinnatifida f. major

text: leaf

text: major


text: shengyang Agricultural university

text: live

text: Plant

text: XHMZ

text: mature

characteristic: dev stage

text: major

text: China: shenyang

text: Crataegus pinnatifida f. major

text: leaf

text: major


text: shengyang Agricultural university

text: live

text: Plant

text: MYDJX

text: mature

text: major

characteristic: forma

text: China: shenyang

text: Crataegus pinnatifida f. major

text: leaf

text: major


text: shengyang Agricultural university

text: live

text: Plant

text: MYDJX

text: mature

text: major

text: China: shenyang

text: Crataegus pinnatifida f. major

text: leaf

characteristic: title

text: major


text: shengyang Agricultural university

text: live

text: Plant

text: XLZR

text: mature

text: major

text: China: shenyang

text: Crataegus pinnatifida f. major

text: leaf

text: major

characteristic: variety


characteristic: External Id

text: shengyang Agricultural university

text: live

text: Plant

text: XLZR

text: mature

text: major

text: China: shenyang

text: Crataegus pinnatifida f. major

text: leaf

text: major


text: shengyang Agricultural university

characteristic: INSDC center name

text: live

text: Plant

text: DW

text: mature

text: major

text: China: shenyang

text: Crataegus pinnatifida f. major

text: leaf

text: major


text: shengyang Agricultural university

text: live

text: Plant

characteristic: SRA accession

text: DW

text: mature

text: major

text: China: shenyang

text: Crataegus pinnatifida f. major

text: leaf

text: major


text: shengyang Agricultural university

text: live

text: Plant

text: BRM

text: mature

text: major

text: China: shenyang

text: Crataegus pinnatifida f. major

text: leaf

characteristic: tissue

text: major


text: shengyang Agricultural university

characteristic: INSDC first public

text: live

text: Plant

text: BRM

text: mature

text: major

text: China: shenyang

text: Crataegus pinnatifida f. major

text: leaf

text: major


text: shengyang Agricultural university

characteristic: INSDC last update

text: live

text: Plant

text: mature

text: major

text: China: shenyang

text: Crataegus pinnatifida f. major

text: leaf

text: major


text: shengyang Agricultural university

text: live

text: Plant

text: mature

text: major

text: China: shenyang

text: Crataegus pinnatifida f. major

text: leaf

text: major


BSA-R

text: Chung-Ang University

characteristic: INSDC secondary accession

text: live

text: Plant

text: 3-leaf stage

text: South Korea: Ansung

text: bulked DNA from anthracnose-resistant F2 progeny

characteristic: isolate

text: Citrullus lanatus

text: leaf

text: BSA-R


BSA-S

text: Chung-Ang University

text: live

text: Plant

text: 3-leaf stage

text: South Korea: Ansung

text: bulked DNA from anthracnose-susceptible F2 progeny

text: Citrullus lanatus

characteristic: organism

text: leaf

text: BSA-S


text: shengyang Agricultural university

text: live

text: Plant

characteristic: NCBI submission package

text: QJX

text: mature

text: major

text: China: shenyang

characteristic: geo loc name

text: Crataegus pinnatifida f. major

text: leaf

text: major


text: shengyang Agricultural university

text: live

characteristic: INSDC status

text: Plant

characteristic: NCBI submission model

text: QJX

text: mature

text: major

text: China: shenyang

text: Crataegus pinnatifida f. major

text: leaf

text: major


text: shengyang Agricultural university

text: live

text: Plant

text: CK

characteristic: cultivar

text: mature

characteristic: dev stage

text: major

text: China: shenyang

text: Crataegus pinnatifida f. major

text: leaf

text: major


text: Institute of Urban Environment,Chinese Academy of Sciences

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: An antibiotic resistant bacterial strain, which was recognized to be Pelomonas saccharophila , was isolated from groundwater in the East of China. Whole Genome Sequencing was conducted to reveal uncharted secret of this bacterial strain.

characteristic: description

text: China:Ningbo, Zhejiang

text: 32 degree centigrade, aerobic

characteristic: isolation source

text: Roseateles saccharophilus

text: cell culture

characteristic: sample type

text: NBRC 103037

characteristic: strain

text: Microbe sample from Pelomonas saccharophila sp.

characteristic: title

text: type strain of Pseudomonas saccharophila

characteristic: type-material


characteristic: External Id

text: shengyang Agricultural university

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Plant

characteristic: SRA accession

text: CK

text: mature

text: major

characteristic: forma

text: China: shenyang

text: Crataegus pinnatifida f. major

text: leaf

characteristic: tissue

text: major

characteristic: variety


text: shengyang Agricultural university

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Plant

characteristic: NCBI submission model

characteristic: NCBI submission package

text: QYMP

characteristic: cultivar

text: mature

text: major

text: China: shenyang

characteristic: geo loc name

text: Crataegus pinnatifida f. major

characteristic: organism

text: leaf

text: major


text: shengyang Agricultural university

text: live

text: Plant

text: QYMP

text: mature

characteristic: dev stage

text: major

text: China: shenyang

text: Crataegus pinnatifida f. major

text: leaf

characteristic: title

text: major


characteristic: External Id

text: shengyang Agricultural university

text: live

text: Plant

text: DMQ

text: mature

text: major

text: China: shenyang

text: Crataegus pinnatifida f. major

text: leaf

text: major


text: shengyang Agricultural university

characteristic: INSDC center name

text: live

text: Plant

text: DMQ

text: mature

text: major

text: China: shenyang

text: Crataegus pinnatifida f. major

text: leaf

text: major


Pelomonas saccharophila V22GWSZ

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: An antibiotic resistant bacterial strain, which was recognized to be Pelomonas saccharophila sp, was isolated from groundwater in the East of China. Whole Genome Sequencing was conducted to reveal uncharted secret of this bacterial strain.

characteristic: description

text: China:Ningbo, Zhejiang

text: groundwater

characteristic: isolation source

text: 29.46 N 121.20 E

characteristic: lat lon

text: Roseateles saccharophilus

text: cell culture

characteristic: sample type

text: NBRC 103037

characteristic: strain

characteristic: type-material


Roseovarius sp. YLY04

text: Shandong University

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: SRA accession

text: China: Weihai

text: Dicentrarchus labrax

characteristic: host

text: gut

text: Roseovarius dicentrarchi

text: cell culture

text: wild-caught individual

text: Microbe sample from Roseovarius sp. YLY04

text: type material of Pelagivirga dicentrarchi

characteristic: type material


Pseudomonas zhaodongensis SST2

text: Kingston University

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: Pseudomonas zhaodongensis isolate from deep marine sediment

text: Antarctica

characteristic: geo loc name

text: marine sediment

text: Stutzerimonas zhaodongensis

characteristic: organism

text: cell culture

text: Pseudomonas zhaodongensis isolate SST2

characteristic: title


characteristic: External Id

text: Northwest A&F University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: MIGS.ba

characteristic: collection date

text: 0-20 cm

characteristic: depth

text: Keywords: GSC:MIxS;MIGS:6.0

text: 838 m

characteristic: elev

text: plateau

characteristic: env biome

text: orchard

characteristic: env feature

text: soil

text: China: Shaanxi

characteristic: isolate

text: 35.21 N 109.56 E

text: Candidatus Solirubrobacter pratensis

text: MIGS Cultured Bacterial/Archaeal sample from Candidatus Solirubrobacter pratensis


text: KAUST

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

characteristic: SRA accession

text: 5 cm

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: Mangrove biome

text: tidal mangrove

text: Sediments

text: Saudi Arabia: Coast of Red Sea

text: 22.41 N 39.12 E

text: Nitratireductor thuwali

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Nitratireductor thuwali

text: type strain of Nitratireductor thuwalensis

characteristic: type-material


characteristic: External Id

text: d__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella

text: Gladstone Institutes

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotellaceae_UCG-001;s__?

text: AH-173-E10_NODE_62 (1493 bp)

text: single amplified genome (SAG)

text: SPAdes genome assembler v3.9.0

characteristic: assembler

text: --careful --sc --phred-offset 33

text: k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;g__Xylanibacter;s__Xylanibacter_oryzae

characteristic: completeness

text: nt;AG-665_masked.fasta;Simons_negatives_170807.fasta;171127_simons_neg_curated.fasta

text: homo sapiens,human dna sequence,mus musculus,Delftia acidovorans,Achromobacter xylosoxidans,Stenotrophomonas maltophilia,Bradyrhizobium,AG-665_NODE_,AG-SIM-NEG_

text: 4 m

text: digestive tract

text: fecal environment

text: feces

text: USA

characteristic: geo loc name

text: Mus musculus

characteristic: host

text: hindgut

characteristic: host body habitat

text: stool

characteristic: host body product

text: male

characteristic: host sex

characteristic: host subject id

characteristic: host taxid

text: 37.77 N 122.39 W

characteristic: lat lon

text: -k 21 -t 30 -c 3

text: kmernorm 1.05

characteristic: normalizer

text: Xylanibacter oryzae

characteristic: organism

text: single cell

characteristic: sample type

text: SCGC AH-173-E10

characteristic: title

text: -phred33 LEADING:0 TRAILING:5 SLIDINGWINDOW:4:15 MINLEN:36

text: Trimmomatic v0.32

characteristic: trimmer


characteristic: External Id

text: Bioinformatics, EMBL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: SRA accession

text: H3K27me3, Cell Signaling, #9733

characteristic: chip antibody

text: Wild type

characteristic: genotype

text: Homo sapiens

text: Myoblast

text: Myoblast

characteristic: tissue


text: Bioinformatics, EMBL

text: live

text: Generic

characteristic: NCBI submission package

text: H3K27me3, Cell Signaling, #9733

text: Wild type

text: Homo sapiens

text: 293-TRex cell line


text: Bioinformatics, EMBL

text: live

text: Generic

text: H3K36me3, Abcam, #ab9050

text: Wild type

text: Homo sapiens

text: 293-TRex cell line


text: Bioinformatics, EMBL

text: live

text: Generic

text: SPT16, Cell Signaling, #12191

text: Wild type

text: Homo sapiens

text: 293-TRex cell line


text: Bioinformatics, EMBL

text: live

text: Generic

text: H3K36me2, Cell Signaling, #2901

text: Wild type

text: Homo sapiens

text: 293-TRex cell line


text: Bioinformatics, EMBL

text: live

text: Generic

text: FLAG, Sigma, #A2220

text: Wild type

text: Homo sapiens

text: 293-TRex cell line


text: Bioinformatics, EMBL

text: live

text: Generic

text: FLAG, Sigma, #A2220

text: Wild type

text: Homo sapiens

text: 293-TRex cell line

text: Flag-LEDGF


text: Bioinformatics, EMBL

text: live

text: Generic

text: RNAPII, Santa Cruz, #sc-899

text: Wild type

text: Homo sapiens

text: 293-TRex cell line

text: Pol II


text: Bioinformatics, EMBL

text: live

text: Generic

text: SPT16, Cell Signaling, #12191

text: Wild type

text: Homo sapiens

text: Myoblast

text: Myoblast


text: Bioinformatics, EMBL

text: live

text: Generic

text: RNAPII, Santa Cruz, #sc-899

text: Wild type

text: Homo sapiens

text: Myotube

text: Myotube


text: Bioinformatics, EMBL

text: live

text: Generic

text: RNAPII, Santa Cruz, #sc-899

text: Wild type

text: Homo sapiens

text: Myoblast

text: Myoblast


text: Bioinformatics, EMBL

text: live

text: Generic

text: LEDGF, Proteintech, #25504-1-AP

text: Wild type

text: Homo sapiens

text: Myotube

text: Myotube


text: Bioinformatics, EMBL

text: live

text: Generic

text: LEDGF, Proteintech, #25504-1-AP

text: Wild type

text: Homo sapiens

text: Myoblast

text: Myoblast


text: Bioinformatics, EMBL

text: live

text: Generic

text: HDGF2, Proteintech, #15134-1-AP

text: Wild type

text: Homo sapiens

text: Myotube

text: Myotube


text: Bioinformatics, EMBL

text: live

text: Generic

text: HDGF2, Proteintech, #15134-1-AP

text: Wild type

text: Homo sapiens

text: Myoblast

text: Myoblast


text: Bioinformatics, EMBL

text: live

text: Generic

text: H3K36me3, Abcam, #ab9050

text: Wild type

text: Homo sapiens

text: Myotube

text: Myotube


text: Bioinformatics, EMBL

text: live

text: Generic

text: H3K36me3, Abcam, #ab9050

text: Wild type

text: Homo sapiens

text: Myoblast

text: Myoblast


text: Bioinformatics, EMBL

text: live

text: Generic

text: H3K36me2, Cell Signaling, #2901

text: Wild type

text: Homo sapiens

text: Myotube

text: Myotube


text: Bioinformatics, EMBL

text: live

text: Generic

text: H3K36me2, Cell Signaling, #2901

text: Wild type

text: Homo sapiens

text: Myoblast

text: Myoblast


text: Bioinformatics, EMBL

text: live

text: Generic

text: H3K27me3, Cell Signaling, #9733

text: Wild type

text: Homo sapiens

text: Myotube

text: Myotube


text: DvH-MO Plk 0mM rep a1

characteristic: Descriptor

text: ExxonMobil Research and Engineering

text: live

text: Microbe, viral or environmental

text: Judy Wall's Lab (U. Missouri)

characteristic: isolate

text: Pure culture from the lab

characteristic: isolation source

text: Nitratidesulfovibrio vulgaris str. Hildenborough

text: pure culture planktonic, bio replicate a, tech replicate 1

text: Hildenborough

characteristic: strain

text: type strain of Desulfovibrio vulgaris

characteristic: type material


text: DvH-MO Plk 0mM rep a2

characteristic: External Id

text: ExxonMobil Research and Engineering

text: live

text: Microbe, viral or environmental

text: Judy Wall's Lab (U. Missouri)

text: Pure culture from the lab

characteristic: organism

text: pure culture planktonic, bio replicate a, tech replicate 2

characteristic: sample type

text: Hildenborough

characteristic: title

text: type strain of Desulfovibrio vulgaris


text: DvH-MO Plk 0mM rep b1

text: ExxonMobil Research and Engineering

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

text: Judy Wall's Lab (U. Missouri)

text: Pure culture from the lab

text: pure culture planktonic, bio replicate b, tech replicate 1

text: Hildenborough

text: type strain of Desulfovibrio vulgaris


text: DvH-MO Plk 0mM rep b2

text: ExxonMobil Research and Engineering

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: SRA accession

text: Judy Wall's Lab (U. Missouri)

text: Pure culture from the lab

text: pure culture planktonic, bio replicate b, tech replicate 2

text: Hildenborough

text: type strain of Desulfovibrio vulgaris


text: DvH-MO Plk 0mM rep c

text: ExxonMobil Research and Engineering

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: Judy Wall's Lab (U. Missouri)

text: Pure culture from the lab

text: pure culture planktonic, bio replicate c

text: Hildenborough

text: type strain of Desulfovibrio vulgaris


text: DvH-MO Plk 1.5 mM rep a1

characteristic: Descriptor

text: ExxonMobil Research and Engineering

text: live

text: Microbe, viral or environmental

text: Judy Wall's Lab (U. Missouri)

text: Pure culture from the lab

text: Hildenborough

text: type strain of Desulfovibrio vulgaris


text: DvH-MO Plk 1.5 mM rep a2

text: ExxonMobil Research and Engineering

text: live

text: Microbe, viral or environmental

text: Judy Wall's Lab (U. Missouri)

characteristic: isolate

text: Pure culture from the lab

text: Hildenborough

text: type strain of Desulfovibrio vulgaris


text: DvH-MO Plk 1.5 mM rep b1

text: ExxonMobil Research and Engineering

text: live

text: Microbe, viral or environmental

text: Judy Wall's Lab (U. Missouri)

text: Pure culture from the lab

characteristic: isolation source

text: Hildenborough

text: type strain of Desulfovibrio vulgaris


text: DvH-MO Plk 1.5 mM rep b2

text: ExxonMobil Research and Engineering

text: live

text: Microbe, viral or environmental

text: Judy Wall's Lab (U. Missouri)

text: Pure culture from the lab

text: Hildenborough

characteristic: strain

text: type strain of Desulfovibrio vulgaris


text: DvH-MO Plk 1.5 mM rep c

text: ExxonMobil Research and Engineering

text: live

text: Microbe, viral or environmental

text: Judy Wall's Lab (U. Missouri)

text: Pure culture from the lab

text: Hildenborough

text: type strain of Desulfovibrio vulgaris

characteristic: type material


text: DvH-MO Bfl 0mM rep a1

characteristic: External Id

text: ExxonMobil Research and Engineering

text: live

text: Microbe, viral or environmental

text: Judy Wall's Lab (U. Missouri)

text: Pure culture from the lab

text: pure culture biofilm, bio replicate a, tech replicate 1

text: Hildenborough

text: type strain of Desulfovibrio vulgaris


text: DvH-MO Bfl 0mM rep a2

text: ExxonMobil Research and Engineering

text: live

text: Microbe, viral or environmental

text: Judy Wall's Lab (U. Missouri)

text: Pure culture from the lab

characteristic: organism

text: pure culture biofilm, bio replicate a, tech replicate 2

text: Hildenborough

text: type strain of Desulfovibrio vulgaris


text: DvH-MO Bfl 0mM rep b1

text: ExxonMobil Research and Engineering

text: live

text: Microbe, viral or environmental

text: Judy Wall's Lab (U. Missouri)

text: Pure culture from the lab

text: pure culture biofilm, bio replicate b, tech replicate 1

characteristic: sample type

text: Hildenborough

text: type strain of Desulfovibrio vulgaris


text: DvH-MO Bfl 0mM rep b2

text: ExxonMobil Research and Engineering

text: live

text: Microbe, viral or environmental

text: Judy Wall's Lab (U. Missouri)

text: Pure culture from the lab

text: pure culture biofilm, bio replicate b, tech replicate 2

text: Hildenborough

characteristic: title

text: type strain of Desulfovibrio vulgaris


text: DvH-MO Bfl 0mM rep c

text: ExxonMobil Research and Engineering

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: Judy Wall's Lab (U. Missouri)

text: Pure culture from the lab

text: pure culture biofilm, bio replicate c

text: Hildenborough

text: type strain of Desulfovibrio vulgaris


text: DvH-MO Bfl 1.5 mM rep a1

text: ExxonMobil Research and Engineering

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: Judy Wall's Lab (U. Missouri)

text: Pure culture from the lab

text: Hildenborough

text: type strain of Desulfovibrio vulgaris


text: DvH-MO Bfl 1.5 mM rep a2

text: ExxonMobil Research and Engineering

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Judy Wall's Lab (U. Missouri)

text: Pure culture from the lab

text: Hildenborough

text: type strain of Desulfovibrio vulgaris


text: DvH-MO Bfl 1.5 mM rep b1

text: ExxonMobil Research and Engineering

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

text: Judy Wall's Lab (U. Missouri)

text: Pure culture from the lab

text: Hildenborough

text: type strain of Desulfovibrio vulgaris


text: DvH-MO Bfl 1.5 mM rep b2

text: ExxonMobil Research and Engineering

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: Judy Wall's Lab (U. Missouri)

text: Pure culture from the lab

text: Hildenborough

text: type strain of Desulfovibrio vulgaris


text: DvH-MO Bfl 1.5 mM rep c

text: ExxonMobil Research and Engineering

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: Judy Wall's Lab (U. Missouri)

text: Pure culture from the lab

text: pure culture biofilm, bio replicate c

text: Hildenborough

text: type strain of Desulfovibrio vulgaris


CPCC 204708T

text: Chinese Academy of Medical Sciences & Peking Union Medical College

text: live

text: MIGS.ba

characteristic: SRA accession

characteristic: collection date

text: 0 m

characteristic: depth

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: 1523 m

characteristic: elev

text: soil

characteristic: env biome

text: soil

characteristic: env feature

text: soil

text: China: Xinjiang

characteristic: geo loc name

text: growth at 28

text: 43.75 N 80.75 E

characteristic: lat lon

text: Solirubrobacter deserti

text: No Primary Publication

text: CPCC 204708

text: MIGS Cultured Bacterial/Archaeal sample from Solirubrobacter deserti

text: type strain of Solirubrobacter deserti

characteristic: type-material


SRB + PA14 WT supernatant

characteristic: External Id

text: Pennsylvania State University

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: ATCC 29579

characteristic: isolate

text: ATCC

characteristic: isolation source

characteristic: organism

text: D. vulgaris mixed with PA14 wile type supernatant

characteristic: sample type

text: Hildenborough

characteristic: strain

text: Microbe sample from Nitratidesulfovibrio vulgaris str. Hildenborough

characteristic: title

text: type strain of Desulfovibrio vulgaris

characteristic: type material


SRB + PA14 rhlA supernatant

text: Pennsylvania State University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: SRA accession

characteristic: collection date

text: ATCC 29579

text: ATCC

text: D. vulgaris mixed with PA14 rhlA supernatant

text: Hildenborough

text: type strain of Desulfovibrio vulgaris


characteristic: External Id

text: Huazhong Agricultural University

text: live

text: Generic

text: Duroc x Luchuan crossed pigs

characteristic: breed

text: low

characteristic: imf content

text: Sus scrofa

text: longissimus dorsi muscle

text: longissimus dorsi muscle

characteristic: tissue

text: DLC16012935001_low IMF


text: Huazhong Agricultural University

text: live

text: Generic

characteristic: NCBI submission package

text: Duroc x Luchuan crossed pigs

text: low

text: Sus scrofa

characteristic: organism

text: longissimus dorsi muscle

text: longissimus dorsi muscle

text: DLC16011027401_low IMF


text: Huazhong Agricultural University

text: live

text: Generic

text: Duroc x Luchuan crossed pigs

text: low

text: Sus scrofa

text: longissimus dorsi muscle

text: longissimus dorsi muscle

text: DLC16010837810_low IMF


text: Huazhong Agricultural University

text: live

text: Generic

text: Duroc x Luchuan crossed pigs

text: low

text: Sus scrofa

text: longissimus dorsi muscle

text: longissimus dorsi muscle

text: DLC15123130306_low IMF


text: Huazhong Agricultural University

text: live

text: Generic

text: Duroc x Luchuan crossed pigs

text: low

text: Sus scrofa

text: longissimus dorsi muscle

text: longissimus dorsi muscle

text: DLC15121638107_low IMF


text: Huazhong Agricultural University

text: live

text: Generic

text: Duroc x Luchuan crossed pigs

text: low

text: Sus scrofa

text: longissimus dorsi muscle

text: longissimus dorsi muscle

text: DLC15120925905_low IMF


text: Huazhong Agricultural University

text: live

text: Generic

text: Duroc x Luchuan crossed pigs

text: low

text: Sus scrofa

text: longissimus dorsi muscle

text: longissimus dorsi muscle

text: DLC15120925901_low IMF


text: Huazhong Agricultural University

text: live

text: Generic

text: Duroc x Luchuan crossed pigs

text: low

text: Sus scrofa

text: longissimus dorsi muscle

text: longissimus dorsi muscle

text: DLC16012334404_low IMF


text: Huazhong Agricultural University

text: live

text: Generic

text: Duroc x Luchuan crossed pigs

text: low

text: Sus scrofa

text: longissimus dorsi muscle

text: longissimus dorsi muscle

text: DLC16010928102_low IMF


text: Huazhong Agricultural University

text: live

text: Generic

text: Duroc x Luchuan crossed pigs

text: low

text: Sus scrofa

text: longissimus dorsi muscle

text: longissimus dorsi muscle

text: DLC16011232508_low IMF


text: Huazhong Agricultural University

text: live

text: Generic

text: Duroc x Luchuan crossed pigs

text: low

text: Sus scrofa

text: longissimus dorsi muscle

text: longissimus dorsi muscle

text: DLC15121638110_low IMF


text: Huazhong Agricultural University

text: live

text: Generic

text: Duroc x Luchuan crossed pigs

text: low

text: Sus scrofa

text: longissimus dorsi muscle

text: longissimus dorsi muscle

text: DLC15120526205_low IMF


text: Huazhong Agricultural University

text: live

text: Generic

text: Duroc x Luchuan crossed pigs

text: high

text: Sus scrofa

text: longissimus dorsi muscle

text: longissimus dorsi muscle

text: DLC16011128502_high IMF


text: Huazhong Agricultural University

text: live

text: Generic

text: Duroc x Luchuan crossed pigs

text: high

text: Sus scrofa

text: longissimus dorsi muscle

text: longissimus dorsi muscle

text: DLC16011128402_high IMF


text: Huazhong Agricultural University

text: live

text: Generic

text: Duroc x Luchuan crossed pigs

text: high

text: Sus scrofa

text: longissimus dorsi muscle

text: longissimus dorsi muscle

text: DLC15122831901_high IMF


text: Huazhong Agricultural University

text: live

text: Generic

text: Duroc x Luchuan crossed pigs

text: high

text: Sus scrofa

text: longissimus dorsi muscle

text: longissimus dorsi muscle

text: DLC15121837310_high IMF


text: Huazhong Agricultural University

text: live

text: Generic

text: Duroc x Luchuan crossed pigs

text: high

text: Sus scrofa

text: longissimus dorsi muscle

text: longissimus dorsi muscle

text: DLC15121622708_high IMF


text: Huazhong Agricultural University

text: live

text: Generic

text: Duroc x Luchuan crossed pigs

text: high

text: Sus scrofa

text: longissimus dorsi muscle

text: longissimus dorsi muscle

text: DLC15120625105_high IMF


text: Huazhong Agricultural University

text: live

text: Generic

text: Duroc x Luchuan crossed pigs

text: high

text: Sus scrofa

text: longissimus dorsi muscle

text: longissimus dorsi muscle

text: DLC16011428801_high IMF


text: Huazhong Agricultural University

text: live

text: Generic

text: Duroc x Luchuan crossed pigs

text: high

text: Sus scrofa

text: longissimus dorsi muscle

text: longissimus dorsi muscle

text: DLC16011129805_high IMF


text: Huazhong Agricultural University

text: live

text: Generic

text: Duroc x Luchuan crossed pigs

text: high

text: Sus scrofa

text: longissimus dorsi muscle

text: longissimus dorsi muscle

text: DLC15121622707_high IMF


text: Huazhong Agricultural University

text: live

text: Generic

text: Duroc x Luchuan crossed pigs

text: high

text: Sus scrofa

text: longissimus dorsi muscle

text: longissimus dorsi muscle

text: DLC16011328604_high IMF


text: Huazhong Agricultural University

text: live

text: Generic

text: Duroc x Luchuan crossed pigs

text: high

text: Sus scrofa

text: longissimus dorsi muscle

text: longissimus dorsi muscle

text: DLC15122731808_high IMF


text: Huazhong Agricultural University

text: live

text: Generic

text: Duroc x Luchuan crossed pigs

text: high

text: Sus scrofa

text: longissimus dorsi muscle

text: longissimus dorsi muscle

text: DLC16011328302_high IMF


text: Human Genetics, University of Michigan

text: live

text: Generic

text: Mus musculus

text: GEO accession GSM3294477 is currently private and is scheduled to be released on Apr 01, 2022.


text: Human Genetics, University of Michigan

text: live

text: Generic

text: Mus musculus

text: GEO accession GSM3294476 is currently private and is scheduled to be released on Apr 01, 2022.


text: Human Genetics, University of Michigan

text: live

text: Generic

text: Mus musculus

text: GEO accession GSM3294475 is currently private and is scheduled to be released on Apr 01, 2022.


text: Human Genetics, University of Michigan

text: live

text: Generic

text: Mus musculus

text: GEO accession GSM3294474 is currently private and is scheduled to be released on Apr 01, 2022.


text: Human Genetics, University of Michigan

text: live

text: Generic

text: Mus musculus

text: GEO accession GSM3294473 is currently private and is scheduled to be released on Apr 01, 2022.


text: Human Genetics, University of Michigan

text: live

text: Generic

text: Mus musculus

text: GEO accession GSM3294472 is currently private and is scheduled to be released on Apr 01, 2022.


text: Human Genetics, University of Michigan

text: live

text: Generic

text: Mus musculus

text: GEO accession GSM3294471 is currently private and is scheduled to be released on Apr 01, 2022.


text: Human Genetics, University of Michigan

text: live

text: Generic

text: Mus musculus

text: GEO accession GSM3294470 is currently private and is scheduled to be released on Apr 01, 2022.


text: Human Genetics, University of Michigan

text: live

text: Generic

text: Mus musculus

text: GEO accession GSM3294469 is currently private and is scheduled to be released on Apr 01, 2022.


text: Human Genetics, University of Michigan

text: live

text: Generic

text: Mus musculus

text: GEO accession GSM3294468 is currently private and is scheduled to be released on Apr 01, 2022.


text: Human Genetics, University of Michigan

text: live

text: Generic

text: Mus musculus

text: GEO accession GSM3294467 is currently private and is scheduled to be released on Apr 01, 2022.


text: Human Genetics, University of Michigan

text: live

text: Generic

text: Mus musculus

text: GEO accession GSM3294466 is currently private and is scheduled to be released on Apr 01, 2022.


Mycobacterium sp.13

text: University of Macau

text: live

text: Microbe, viral or environmental

characteristic: culture-collection

text: China: Shenzhen

characteristic: geo loc name

text: mangrove

characteristic: isolation source

text: Mycolicibacterium moriokaense

text: whole organism

characteristic: sample type

text: DSM 44221

characteristic: strain

text: Microbe sample from Mycolicibacterium moriokaense

text: type strain of Mycobacterium moriokaense

characteristic: type-material


NCPPB 881

text: Agriculture and Agri-Food Canada

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

text: NCPPB: 881

characteristic: biomaterial provider

text: Sutic D.

characteristic: collected by

text: Yugoslavia

text: Solanum lycopersicum

characteristic: host

text: Xanthomonas hortorum ATCC 19865

text: NCPPB 881

text: Microbe sample from Xanthomonas hortorum ATCC 19865

characteristic: title

text: type strain of Pseudomonas gardneri


characteristic: External Id

text: Zhang lab, School of BioMedical Sciences, Hunan University

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: SRA accession

text: AR+

characteristic: ar status

text: LNCaP

characteristic: cell line

text: Prostate cancer

characteristic: cell type

text: Homo sapiens

text: Prostate cancer cell line

text: Prostate cancer cell line

characteristic: tissue


text: live

text: Generic

characteristic: NCBI submission package

text: AR-

text: Prostate cancer

text: Homo sapiens

characteristic: organism

text: Prostate cancer cell line

text: Prostate cancer cell line


text: BGI

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: China: Shenzhen

characteristic: geo loc name

text: Homo sapiens

text: feces

characteristic: isolation source

text: Mediterraneibacter gnavus

text: whole organism

characteristic: sample type

characteristic: strain

text: Microbe sample from Mediterraneibacter gnavus


characteristic: External Id

text: Shanghai Jiao Tong University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: TDP171 (Center for Neurodegenerative Research, Philadelphia, PA)

characteristic: chip antibody

text: TDP-43-bound genomic DNA

characteristic: fraction

text: ChIP-seq

text: Illumina HiSeq2000 100 bp single-end

text: Homo sapiens

characteristic: replicate

text: human HEK293 cell

text: TDP-43 ChIP-seq Repicate1

characteristic: title

text: no treatment

characteristic: treatment


text: Shanghai Jiao Tong University

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: cell line

text: Genomic DNA

text: ChIP-seq

text: Illumina HiSeq2000 100 bp single-end

text: Homo sapiens

text: human HEK293 cell

text: TDP-43 ChIP input

text: no treatment


text: Shanghai Jiao Tong University

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: TDP-43-bound genomic DNA

text: ChIP-seq

text: Illumina HiSeq2000 100 bp single-end

text: Homo sapiens

characteristic: organism

text: human HEK293 cell

text: TDP-43 KD ChIP-seq

text: Nucleofected with TDP-43 shRNA (Origene, #TR308946) prior to TDP-43 ChIP.


text: Shanghai Jiao Tong University

text: live

text: Generic

text: TDP-43-bound genomic DNA

text: ChIP-seq

text: Illumina HiSeq2000 100 bp single-end

text: Homo sapiens

text: human HEK293 cell

text: TDP-43 ChIP-seq Repicate3

text: no treatment


text: Shanghai Jiao Tong University

text: live

text: Generic

text: TDP-43-bound genomic DNA

text: ChIP-seq

text: Illumina HiSeq2000 100 bp single-end

text: Homo sapiens

text: human HEK293 cell

text: TDP-43 ChIP-seq Repicate2

text: no treatment


text: Zoological Research Museum Alexander Koenig

text: live

text: Invertebrate

text: Brazil: Bahia, Una Reserve

characteristic: geo loc name

characteristic: isolate

text: Paryphthimoides brixius

characteristic: specimen voucher

text: legs

characteristic: tissue

text: Invertebrate sample from Paryphthimoides brixius


ICMP 5856T

characteristic: External Id

text: The New Zealand Institute for Plant and Food Research Ltd

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Agrobacterium tumefaciens

text: bacterial culture

characteristic: sample type

text: ICMP 5856

characteristic: strain

text: Microbe sample from Agrobacterium tumefaciens


Flavobacterium luteolum

text: Chung-Ang University

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: South Korea:Yangpyeong

text: Fresh water

characteristic: isolation source

text: Flavobacterium psychrotrophum

text: isolated strain

text: Microbe sample from Flavobacterium psychrotrophum

characteristic: title

text: type strain of Flavobacterium psychrotrophum

characteristic: type-material


biofilm & planktonic cell

text: Pennsylvania State University

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: cell

text: Hildenborough

text: Microbe sample from Nitratidesulfovibrio vulgaris str. Hildenborough

text: type strain of Desulfovibrio vulgaris

characteristic: type material


text: Georg-August-University Goettingen

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: RNASeq of Cupriavidus metallidurans CH34 cultivated in Tris-buffered mineral salts medium containing 2 g / l sodium gluconate

characteristic: description

text: decantation tank of zink factory

text: Cupriavidus metallidurans CH34

characteristic: organism

text: whole organism

text: Microbe sample from Cupriavidus metallidurans CH34

text: type strain of Ralstonia metallidurans