text: Centers for Disease Control and Prevention Enteric Diseases Laboratory Branch

text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Yersinia enterocolitica

text: PulseNet

text: missing

text: missing

text: human

text: Yersinia enterocolitica


status: PUBLIC

characteristic: External Id

text: PulseNet Next Generation Subtyping Methods Unit

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: SC

tag: attribute

text: USA:SC

characteristic: isolate

text: chicken breast

text: missing

text: Escherichia coli

characteristic: organism

text: missing

text: South Carolina Department of Health and Environmental Control

characteristic: serovar

text: missing

characteristic: strain

text: Escherichia coli

characteristic: title


text: live

text: Pathogen.env

text: SC

text: USA:SC

text: Chicken liver

text: missing

text: Escherichia coli

text: missing

text: missing

text: Escherichia coli


text: live

text: Pathogen.env

text: SC

text: USA:SC

text: ground turkey

text: missing

text: Escherichia coli

text: missing

text: missing

text: Escherichia coli


text: Michigan Department of Health and Human Services

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Michigan

text: Homo sapiens

characteristic: host

text: SARS-CoV-2/human/USA/MI-MDHHS-SC44830/2023

text: swab

text: baseline surveillance (random sampling)

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Michigan

text: Homo sapiens

text: SARS-CoV-2/human/USA/MI-MDHHS-SC44831/2023

text: swab

text: Severe acute respiratory syndrome coronavirus 2

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Michigan

text: Homo sapiens

text: SARS-CoV-2/human/USA/MI-MDHHS-SC44832/2023

text: swab

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Michigan

text: Homo sapiens

text: SARS-CoV-2/human/USA/MI-MDHHS-SC44833/2023

text: swab

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Michigan

text: Homo sapiens

text: SARS-CoV-2/human/USA/MI-MDHHS-SC44834/2023

text: swab

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Michigan

text: Homo sapiens

text: SARS-CoV-2/human/USA/MI-MDHHS-SC44835/2023

text: swab

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Michigan

text: Homo sapiens

text: SARS-CoV-2/human/USA/MI-MDHHS-SC44836/2023

text: swab

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Michigan

text: Homo sapiens

text: SARS-CoV-2/human/USA/MI-MDHHS-SC44837/2023

text: swab

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Michigan

text: Homo sapiens

text: SARS-CoV-2/human/USA/MI-MDHHS-SC44838/2023

text: swab

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Michigan

text: Homo sapiens

text: SARS-CoV-2/human/USA/MI-MDHHS-SC44839/2023

text: swab

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Michigan

text: Homo sapiens

text: SARS-CoV-2/human/USA/MI-MDHHS-SC44840/2023

text: swab

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Michigan

text: Homo sapiens

text: SARS-CoV-2/human/USA/MI-MDHHS-SC44841/2023

text: swab

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Michigan

text: missing

text: Homo sapiens

text: SARS-CoV-2/human/USA/MI-MDHHS-SC44842/9999

text: swab

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Michigan

text: Homo sapiens

text: SARS-CoV-2/human/USA/MI-MDHHS-SC44843/2023

text: swab

text: baseline surveillance (random sampling)


text: Michigan Department of Health and Human Services

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Michigan

text: Homo sapiens

text: SARS-CoV-2/human/USA/MI-MDHHS-SC44844/2023

text: swab

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Michigan

text: Homo sapiens

text: SARS-CoV-2/human/USA/MI-MDHHS-SC44845/2023

text: swab

text: baseline surveillance (random sampling)

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Michigan

text: Homo sapiens

text: SARS-CoV-2/human/USA/MI-MDHHS-SC44846/2023

text: swab

text: Severe acute respiratory syndrome coronavirus 2

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Michigan

text: Homo sapiens

text: SARS-CoV-2/human/USA/MI-MDHHS-SC44847/2023

text: swab

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Michigan

text: Homo sapiens

text: SARS-CoV-2/human/USA/MI-MDHHS-SC44848/2023

text: swab

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Michigan

text: Homo sapiens

text: SARS-CoV-2/human/USA/MI-MDHHS-SC44849/2023

text: swab

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Michigan

text: Homo sapiens

text: SARS-CoV-2/human/USA/MI-MDHHS-SC44850/2023

text: swab

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Michigan

text: Homo sapiens

text: SARS-CoV-2/human/USA/MI-MDHHS-SC44851/2023

text: swab

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Michigan

text: Homo sapiens

text: SARS-CoV-2/human/USA/MI-MDHHS-SC44852/2023

text: swab

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Michigan

text: Homo sapiens

text: SARS-CoV-2/human/USA/MI-MDHHS-SC44853/2023

text: swab

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Michigan

text: Homo sapiens

text: SARS-CoV-2/human/USA/MI-MDHHS-SC44854/2023

text: swab

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Michigan

text: Homo sapiens

text: SARS-CoV-2/human/USA/MI-MDHHS-SC44855/2023

text: swab

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Michigan

text: Homo sapiens

text: SARS-CoV-2/human/USA/MI-MDHHS-SC44856/2023

text: swab

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Michigan

text: Homo sapiens

text: SARS-CoV-2/human/USA/MI-MDHHS-SC44857/2023

text: swab

text: baseline surveillance (random sampling)


text: Michigan Department of Health and Human Services

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Michigan

text: Homo sapiens

text: SARS-CoV-2/human/USA/MI-MDHHS-SC44858/2023

text: swab

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Michigan

text: Homo sapiens

text: SARS-CoV-2/human/USA/MI-MDHHS-SC44859/2023

text: swab

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Michigan

text: Homo sapiens

text: SARS-CoV-2/human/USA/MI-MDHHS-SC44860/2023

text: swab

text: baseline surveillance (random sampling)

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Michigan

text: Homo sapiens

text: SARS-CoV-2/human/USA/MI-MDHHS-SC44861/2023

text: swab

text: Severe acute respiratory syndrome coronavirus 2

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Michigan

text: Homo sapiens

text: SARS-CoV-2/human/USA/MI-MDHHS-SC44862/2023

text: swab

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Michigan

text: Homo sapiens

text: SARS-CoV-2/human/USA/MI-MDHHS-SC44863/2023

text: swab

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Michigan

text: Homo sapiens

text: SARS-CoV-2/human/USA/MI-MDHHS-SC44864/2023

text: swab

text: baseline surveillance (random sampling)


text: Centers for Disease Control and Prevention Enteric Diseases Laboratory Branch

text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Yersinia enterocolitica

text: PulseNet

text: missing

text: missing

text: human

text: Yersinia enterocolitica


text: PulseNet Next Generation Subtyping Methods Unit

text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Listeria monocytogenes

text: missing

text: Listeria monocytogenes


text: Wadsworth Center - NYS DOH

text: live

text: MLST2 Pasteur

characteristic: MLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: rectal swab

text: Acinetobacter baumannii

text: whole organism

text: Microbe sample from Acinetobacter baumannii


text: Wadsworth Center - NYS DOH

text: live

text: MLST499 Pasteur

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: rectal swab

text: Acinetobacter baumannii

text: whole organism


text: Wadsworth Center - NYS DOH

text: live

text: MLST463 PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: rectal swab

text: Pseudomonas aeruginosa

text: whole organism

text: Microbe sample from Pseudomonas aeruginosa


text: Wadsworth Center - NYS DOH

text: live

text: MLST14 PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: blood

text: Klebsiella pneumoniae

text: whole organism

text: Microbe sample from Klebsiella pneumoniae


text: Wadsworth Center - NYS DOH

text: live

text: MLST258 PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: blood

text: Klebsiella oxytoca

text: whole organism

text: Microbe sample from Klebsiella oxytoca


text: Wadsworth Center - NYS DOH

text: live

text: MLST147 PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: urine

text: Klebsiella pneumoniae

text: whole organism


text: Wadsworth Center - NYS DOH

text: live

text: MLST361 PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: ileostomy site

text: Escherichia coli

text: whole organism

text: Microbe sample from Escherichia coli


text: Wadsworth Center - NYS DOH

text: live

text: MLST830 PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: urine

text: Pseudomonas aeruginosa

text: whole organism


text: Wadsworth Center - NYS DOH

text: live

text: MLST648 PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: abscess

text: Escherichia coli

text: whole organism

text: Microbe sample from Escherichia coli


text: Wadsworth Center - NYS DOH

text: live

text: MLST78 PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: foot

text: Enterobacter hormaechei

text: whole organism

text: Microbe sample from Enterobacter hormaechei


text: Wadsworth Center - NYS DOH

text: live

text: MLST395 PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: rectal swab

text: Klebsiella pneumoniae

text: whole organism


text: Wadsworth Center - NYS DOH

text: live

text: MLST7881 PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: rectal swab

text: Escherichia coli

text: whole organism

text: Microbe sample from Escherichia coli


text: Wadsworth Center - NYS DOH

text: live

text: MLST258 PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: rectal swab

text: Klebsiella pneumoniae

text: whole organism


text: Wadsworth Center - NYS DOH

text: live

text: MLST2 Pasteur

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: abscess

text: Acinetobacter baumannii

text: whole organism


text: Wadsworth Center - NYS DOH

text: live

text: MLST171 PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: urine

text: Enterobacter hormaechei

text: whole organism


text: Wadsworth Center - NYS DOH

text: live

text: MLST116 PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: urine

text: Enterobacter hormaechei

text: whole organism


text: Wadsworth Center - NYS DOH

text: live

text: MLST20 PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: urine

text: Klebsiella pneumoniae

text: whole organism


text: Wadsworth Center - NYS DOH

text: live

text: MLST- PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: wound

text: Pseudomonas aeruginosa

text: whole organism


text: Wadsworth Center - NYS DOH

text: live

text: MLST307 PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: blood

text: Klebsiella pneumoniae

text: whole organism


text: Wadsworth Center - NYS DOH

text: live

text: MLST- PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: sacrum

text: Pseudomonas aeruginosa

text: whole organism


text: Wadsworth Center - NYS DOH

text: live

text: MLST405 PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: urine

text: Escherichia coli

text: whole organism

text: Microbe sample from Escherichia coli


text: Wadsworth Center - NYS DOH

text: live

text: MLST405 PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: sputum

text: Escherichia coli

text: whole organism

text: Microbe sample from Escherichia coli


text: Wadsworth Center - NYS DOH

text: live

text: MLST167 PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: urine

text: Escherichia coli

text: whole organism

text: Microbe sample from Escherichia coli


text: Wadsworth Center - NYS DOH

text: live

text: MLST231 PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: urine

text: Enterobacter cloacae

text: whole organism

text: Microbe sample from Enterobacter cloacae


text: Wadsworth Center - NYS DOH

text: live

text: MLST4843 PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: blood

text: Klebsiella pneumoniae

text: whole organism


text: Wadsworth Center - NYS DOH

text: live

text: MLST11 PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: urine

text: Klebsiella pneumoniae

text: whole organism


text: Wadsworth Center - NYS DOH

text: live

text: MLST648 PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: urine clean catch

text: Escherichia coli

text: whole organism

text: Microbe sample from Escherichia coli


text: Wadsworth Center - NYS DOH

text: live

text: MLST395 PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: urine

text: Pseudomonas aeruginosa

text: whole organism


text: Wadsworth Center - NYS DOH

text: live

text: MLST357 PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: sputum

text: Pseudomonas aeruginosa

text: whole organism


text: Wadsworth Center - NYS DOH

text: live

text: MLST463 PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: urine

text: Pseudomonas aeruginosa

text: whole organism


text: live

text: Pathogen.cl

text: SC

text: USA:SC

text: missing

text: missing

text: missing

text: missing

text: missing

text: Campylobacter jejuni

text: missing

text: South Carolina Department of Health and Environmental Control

text: jejuni

text: missing

text: Campylobacter jejuni


text: Netherlands Institute of Ecology (NIOO)

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: A

characteristic: Replicate

text: Keywords: GSC:MIxS;MIMARKS:6.0

characteristic: description

text: Netherlands: Wageningen

text: Aporrectodea caliginosa

text: gut

text: endogeic

text: 51.99 N 5.67 E

text: gut metagenome

text: Endogeic LDPE MPs A

text: Low-density Polyethylene microplastics

characteristic: treatment


characteristic: External Id

text: Netherlands Institute of Ecology (NIOO)

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: B

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: Netherlands: Wageningen

text: Aporrectodea caliginosa

text: gut

text: endogeic

text: 51.99 N 5.67 E

text: gut metagenome

text: Endogeic LDPE MPs B

text: Low-density Polyethylene microplastics


text: Netherlands Institute of Ecology (NIOO)

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: C

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: Netherlands: Wageningen

text: Aporrectodea caliginosa

text: gut

text: endogeic

text: 51.99 N 5.67 E

text: gut metagenome

text: Endogeic LDPE MPs C

text: Low-density Polyethylene microplastics


text: Netherlands Institute of Ecology (NIOO)

text: live

text: MIGS/MIMS/MIMARKS.host-associated

characteristic: NCBI submission model

text: MIMARKS.survey

characteristic: NCBI submission package

text: A

characteristic: SRA accession

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: Netherlands: Wageningen

text: Aporrectodea caliginosa

text: gut

text: endogeic

text: 51.99 N 5.67 E

text: gut metagenome

text: Endogeic No MPs A

text: No microplastics


text: Netherlands Institute of Ecology (NIOO)

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: B

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: Netherlands: Wageningen

text: Aporrectodea caliginosa

text: gut

text: endogeic

text: 51.99 N 5.67 E

text: gut metagenome

characteristic: organism

text: Endogeic No MPs B

text: No microplastics


text: Netherlands Institute of Ecology (NIOO)

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: C

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: Netherlands: Wageningen

text: Aporrectodea caliginosa

text: gut

text: endogeic

text: 51.99 N 5.67 E

text: gut metagenome

text: Endogeic No MPs C

text: No microplastics


text: Netherlands Institute of Ecology (NIOO)

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: A

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: Netherlands: Wageningen

text: Lumbricus terrestris

text: gut

text: anecic

text: 51.99 N 5.67 E

text: gut metagenome

text: Anecic LDPE MPs A

text: Low-density Polyethylene microplastics


text: Netherlands Institute of Ecology (NIOO)

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: B

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: Netherlands: Wageningen

text: Lumbricus terrestris

text: gut

text: anecic

text: 51.99 N 5.67 E

text: gut metagenome

text: Anecic LDPE MPs B

text: Low-density Polyethylene microplastics


text: Netherlands Institute of Ecology (NIOO)

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: C

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: Netherlands: Wageningen

text: Lumbricus terrestris

text: gut

text: anecic

text: 51.99 N 5.67 E

text: gut metagenome

text: Anecic LDPE MPs C

text: Low-density Polyethylene microplastics


text: Netherlands Institute of Ecology (NIOO)

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: A

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: Netherlands: Wageningen

text: Lumbricus terrestris

text: gut

text: anecic

text: 51.99 N 5.67 E

text: gut metagenome

text: Anecic No MPs A

text: No microplastics


text: Netherlands Institute of Ecology (NIOO)

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: B

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: Netherlands: Wageningen

text: Lumbricus terrestris

text: gut

text: anecic

text: 51.99 N 5.67 E

text: gut metagenome

text: Anecic No MPs B

text: No microplastics


text: Netherlands Institute of Ecology (NIOO)

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: C

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: Netherlands: Wageningen

text: Lumbricus terrestris

text: gut

text: anecic

text: 51.99 N 5.67 E

text: gut metagenome

text: Anecic No MPs C

text: No microplastics


text: live

text: Pathogen.cl

text: SC

text: USA:SC

text: missing

text: missing

text: missing

characteristic: isolate

text: missing

text: missing

text: Escherichia coli

text: missing

characteristic: serovar

text: missing

characteristic: strain

text: Escherichia coli


text: live

text: Pathogen.env

text: SC

text: USA:SC

text: ground turkey

text: missing

text: Escherichia coli

text: missing

text: missing

text: Escherichia coli

characteristic: title


Staphylococcus aureus str BSN43

text: Wayne State University

text: live

text: Pathogen.cl

text: Andrew D. Berti

text: ST5-MRSA-IVg CC5

characteristic: genotype

text: Staphylococcus

characteristic: genus

text: USA: Detroit, MI

text: Homo sapiens

characteristic: host

text: Patient with history of peripheral vascular disease and uncontrolled diabetes presents with polymicrobial, non-healing left lower extremity wound extending to exposed bone. Clinical course was complicated by polymicrobial bacteremia including Proteus mirabilis and Staphylococcus aureus. Surgical management included below-the-knee amputation. Medical management included vancomycin plus cefepime transitioned to daptomycin, cefepime and metronidazole. Patient was stabilized and left against medical advice prior to rehabilitation placement. Duration of bacteremia: 8 days.

text: non-healing wound

text: recovery

text: male

characteristic: isolate-name-alias

text: blood

text: 42.33 N 83.05 W

text: Staphylococcus aureus

text: Pathogen: clinical or host-associated sample from Staphylococcus aureus

type: AMR curated data - CABBAGE

value: daptomycin

value: CLSI

value: broth dilution

value: mg/L

value: BD Phoenix

value: susceptible

value: Staphylococcus aureus

value: oxacillin

value: resistant

value: vancomycin

value: erythromycin

value: rifampin

value: clindamycin

value: trimethoprim-sulfamethoxazole

value: gentamicin

value: linezolid

value: e-test


Staphylococcus aureus str BSN44

characteristic: External Id

text: Wayne State University

characteristic: INSDC center name

text: live

text: Pathogen.cl

text: Andrew D. Berti

text: ST5-MRSA-IVg CC5

text: Staphylococcus

text: USA: Detroit, MI

text: Homo sapiens

text: Patient with end-stage renal disease presents with lower back pain and staphylococcal bacteremia secondary to an infected catheter. Magnetic resonance imaging reveales lumbosacral osteomyelitis with epidural phlegmon, abscess and localized arachnoiditis. Surgical management included laminectomy and epidural phlegmon evacuation. Medical management included vancomycin transitioned to daptomycin. Patient was discharged in stable condition to a skilled nursing facility. Duration of bacteremia: 6 days.

text: spinal osteomyelitis

text: chronic disease

text: male

text: blood

text: 42.33 N 83.05 W

text: Staphylococcus aureus

value: daptomycin


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.cl

text: SC

text: USA:SC

text: missing

text: missing

text: missing

text: missing

text: missing

text: Shigella sonnei

text: missing

text: missing

text: Shigella sonnei


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: Salmonella enterica


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: RNA

characteristic: analyte type

characteristic: biospecimen repository

text: 30021_lesA_d8_19587A.R01_L006324_scRNA_591

characteristic: biospecimen repository sample id

text: Supraclavicular lymph node

characteristic: body site

text: Follicular lymphoma

characteristic: histological type

text: Yes

characteristic: is tumor

text: Homo sapiens

text: male

characteristic: sex

text: Case Set

characteristic: study design

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Tumor RNA sample from Supraclavicular lymph node of a human male participant in the dbGaP study "Single-Cell Genomic Analysis of Lymphoma"


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: SRA accession

text: RNA

text: 34842_lesB_d8_13311A.R01_L007769_scRNA_742

text: Axillarly lymph node

text: Follicular lymphoma

text: Yes

text: Homo sapiens

characteristic: organism

text: female

text: Case Set

text: Tumor RNA sample from Axillarly lymph node of a human female participant in the dbGaP study "Single-Cell Genomic Analysis of Lymphoma"

characteristic: title


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: RNA

characteristic: analyte type

characteristic: biospecimen repository

text: 37293_lesB_d8_13428A.R01_L011532_scRNA_940

characteristic: biospecimen repository sample id

text: Axillarly lymph node

text: Follicular lymphoma

text: Yes

text: Homo sapiens

text: male

text: Case Set

text: Tumor RNA sample from Axillarly lymph node of a human male participant in the dbGaP study "Single-Cell Genomic Analysis of Lymphoma"


text: dbGaP

text: live

text: Generic

text: RNA

text: 36840_lesA_wk6_13405A.R01_L009432_scRNA_821

text: Inguinal lymph node

characteristic: body site

text: Follicular lymphoma

characteristic: histological type

text: Yes

characteristic: is tumor

text: Homo sapiens

text: female

characteristic: sex

text: Case Set

characteristic: study design

characteristic: study name

text: Tumor RNA sample from Inguinal lymph node of a human female participant in the dbGaP study "Single-Cell Genomic Analysis of Lymphoma"


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: RNA

text: 32892_lesA_d8_13352A.R01_L009394_scRNA_821

text: Inguinal lymph node

text: Follicular lymphoma

text: Yes

text: Homo sapiens

text: female

text: Case Set

text: Single-Cell Genomic Analysis of Lymphoma

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle


text: dbGaP

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: SRA accession

text: RNA

text: 37374_lesB_pre_13432A.R01_L011536_scRNA_940

text: Inguinal lymph node

text: Follicular lymphoma

text: Yes

text: Homo sapiens

characteristic: organism

text: male

text: Case Set

text: Tumor RNA sample from Inguinal lymph node of a human male participant in the dbGaP study "Single-Cell Genomic Analysis of Lymphoma"

characteristic: title


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

text: RNA

characteristic: analyte type

characteristic: biospecimen repository

text: 37374_lesB_wk6_13436A.R01_L011540_scRNA_940

characteristic: biospecimen repository sample id

text: Inguinal lymph node

characteristic: body site

text: Follicular lymphoma

characteristic: histological type

text: Yes

text: Homo sapiens

text: male

text: Case Set


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

text: RNA

text: 31654_lesA_d8_13413A.R01_L009656_scRNA_862

text: Submandibular lymph node

text: Follicular lymphoma

text: Yes

characteristic: is tumor

text: Homo sapiens

text: male

characteristic: sex

text: Case Set

characteristic: study design

characteristic: study name

text: Tumor RNA sample from Submandibular lymph node of a human male participant in the dbGaP study "Single-Cell Genomic Analysis of Lymphoma"


text: dbGaP

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

text: RNA

text: 36510_lesB_d8_19642A.R01_L006749_scRNA_670

text: Cervical lymph node

text: Follicular lymphoma

text: Yes

text: Homo sapiens

text: female

text: Case Set

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Tumor RNA sample from Cervical lymph node of a human female participant in the dbGaP study "Single-Cell Genomic Analysis of Lymphoma"


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: RNA

characteristic: analyte type

text: 31654_lesA_wk6_13417A.R01_L009659_scRNA_862

text: Submandibular lymph node

text: Follicular lymphoma

text: Yes

text: Homo sapiens

characteristic: organism

text: male

text: Case Set

characteristic: title


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

text: RNA

characteristic: biospecimen repository

text: 37293_lesA_d8_13427A.R01_L011531_scRNA_940

characteristic: biospecimen repository sample id

text: Axillarly lymph node

characteristic: body site

text: Follicular lymphoma

characteristic: histological type

text: Yes

text: Homo sapiens

text: male

text: Case Set


text: dbGaP

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: RNA

text: 36552_lesA_d8_13402A.R01_L009422_scRNA_821

text: Supraclavicular lymph node

text: Follicular lymphoma

text: Yes

characteristic: is tumor

text: Homo sapiens

text: female

characteristic: sex

text: Case Set

characteristic: study design

characteristic: study name

text: Tumor RNA sample from Supraclavicular lymph node of a human female participant in the dbGaP study "Single-Cell Genomic Analysis of Lymphoma"


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: RNA

text: 30021_lesA_wk6_19629A.R01_L006700_scRNA_591

text: Supraclavicular lymph node

text: Follicular lymphoma

text: Yes

text: Homo sapiens

text: male

text: Case Set

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Tumor RNA sample from Supraclavicular lymph node of a human male participant in the dbGaP study "Single-Cell Genomic Analysis of Lymphoma"


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

characteristic: SRA accession

text: RNA

characteristic: analyte type

text: 33464_lesB_wk6_13317A.R01_L007793_scRNA_742

text: Submandibular lymph node

text: Follicular lymphoma

text: Yes

text: Homo sapiens

characteristic: organism

text: male

text: Case Set

characteristic: title


text: dbGaP

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: RNA

characteristic: biospecimen repository

text: 33464_lesA_d8_13304A.R01_L007789_scRNA_742

characteristic: biospecimen repository sample id

text: Axillarly lymph node

characteristic: body site

text: Follicular lymphoma

characteristic: histological type

text: Yes

text: Homo sapiens

text: male

text: Case Set

text: Tumor RNA sample from Axillarly lymph node of a human male participant in the dbGaP study "Single-Cell Genomic Analysis of Lymphoma"


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: RNA

text: 35476_lesB_d8_21335A.R01_L006844_scRNA_670

text: Submandibular lymph node

text: Follicular lymphoma

text: Yes

characteristic: is tumor

text: Homo sapiens

text: female

characteristic: sex

text: Case Set

characteristic: study design

characteristic: study name

text: Tumor RNA sample from Submandibular lymph node of a human female participant in the dbGaP study "Single-Cell Genomic Analysis of Lymphoma"


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission package

text: RNA

text: 36482_lesA_d8_19579A.R01_L006318_scRNA_591

text: Axillarly lymph node

text: Follicular lymphoma

text: Yes

text: Homo sapiens

text: female

text: Case Set

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Tumor RNA sample from Axillarly lymph node of a human female participant in the dbGaP study "Single-Cell Genomic Analysis of Lymphoma"


text: dbGaP

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: SRA accession

text: RNA

characteristic: analyte type

text: 37293_lesA_pre_13425A.R01_L011529_scRNA_940

text: Axillarly lymph node

text: Follicular lymphoma

text: Yes

text: Homo sapiens

characteristic: organism

text: male

text: Case Set

text: Single-Cell Genomic Analysis of Lymphoma

characteristic: title


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: RNA

characteristic: biospecimen repository

text: 37374_lesB_d8_13434A.R01_L011538_scRNA_940

characteristic: biospecimen repository sample id

text: Inguinal lymph node

characteristic: body site

text: Follicular lymphoma

characteristic: histological type

text: Yes

text: Homo sapiens

text: male

text: Case Set

text: Tumor RNA sample from Inguinal lymph node of a human male participant in the dbGaP study "Single-Cell Genomic Analysis of Lymphoma"


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

text: RNA

text: 37374_lesA_wk6_13435A.R01_L011539_scRNA_940

text: Axillarly lymph node

text: Follicular lymphoma

text: Yes

characteristic: is tumor

text: Homo sapiens

text: male

characteristic: sex

text: Case Set

characteristic: study design

characteristic: study name


text: dbGaP

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission package

text: RNA

text: 30134_lesA_wk6_13380A.R01_L009415_scRNA_821

text: Supraclavicular lymph node

text: Follicular lymphoma

text: Yes

text: Homo sapiens

text: female

text: Case Set

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: SRA accession

text: RNA

characteristic: analyte type

text: 30134_lesB_d8_13375A.R01_L009413_scRNA_821

text: Inguinal lymph node

text: Follicular lymphoma

text: Yes

text: Homo sapiens

characteristic: organism

text: female

text: Case Set

text: Tumor RNA sample from Inguinal lymph node of a human female participant in the dbGaP study "Single-Cell Genomic Analysis of Lymphoma"

characteristic: title


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

text: RNA

characteristic: biospecimen repository

text: 36482_lesB_d8_19580A.R01_L006319_scRNA_591

characteristic: biospecimen repository sample id

text: Axillarly lymph node

characteristic: body site

text: Follicular lymphoma

characteristic: histological type

text: Yes

text: Homo sapiens

text: female

text: Case Set


text: dbGaP

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: RNA

text: 32892_lesB_d8_13353A.R01_L009395_scRNA_821

text: Inguinal lymph node

text: Follicular lymphoma

text: Yes

characteristic: is tumor

text: Homo sapiens

text: female

characteristic: sex

text: Case Set

characteristic: study design

characteristic: study name


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: RNA

text: 36840_lesA_d8_13388A.R01_L009430_scRNA_821

text: Inguinal lymph node

text: Follicular lymphoma

text: Yes

text: Homo sapiens

text: female

text: Case Set

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

characteristic: SRA accession

text: RNA

characteristic: analyte type

text: 31654_lesB_d8_13414A.R01_L009657_scRNA_862

text: Cervical lymph node

text: Follicular lymphoma

text: Yes

text: Homo sapiens

characteristic: organism

text: male

text: Case Set

text: Tumor RNA sample from Cervical lymph node of a human male participant in the dbGaP study "Single-Cell Genomic Analysis of Lymphoma"

characteristic: title


text: dbGaP

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: RNA

characteristic: biospecimen repository

text: 32892_lesB_wk6_13360A.R01_L009404_scRNA_821

characteristic: biospecimen repository sample id

text: Inguinal lymph node

characteristic: body site

text: Follicular lymphoma

characteristic: histological type

text: Yes

text: Homo sapiens

text: female

text: Case Set


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: RNA

text: 36552_lesA_pre_13399A.R01_L009419_scRNA_821

text: Supraclavicular lymph node

text: Follicular lymphoma

text: Yes

characteristic: is tumor

text: Homo sapiens

text: female

characteristic: sex

text: Case Set

characteristic: study design

characteristic: study name

text: Tumor RNA sample from Supraclavicular lymph node of a human female participant in the dbGaP study "Single-Cell Genomic Analysis of Lymphoma"


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission package

text: RNA

text: 35476_lesA_d8_21334A.R01_L006843_scRNA_670

text: Inguinal lymph node

text: Follicular lymphoma

text: Yes

text: Homo sapiens

text: female

text: Case Set

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle


text: dbGaP

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: SRA accession

text: RNA

characteristic: analyte type

text: 35476_lesB_pre_21318A.R01_L006841_scRNA_670

text: Submandibular lymph node

text: Follicular lymphoma

text: Yes

text: Homo sapiens

characteristic: organism

text: female

text: Case Set

text: Tumor RNA sample from Submandibular lymph node of a human female participant in the dbGaP study "Single-Cell Genomic Analysis of Lymphoma"

characteristic: title


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: RNA

characteristic: biospecimen repository

text: 36510_lesB_wk6_19644A.R01_L006751_scRNA_670

characteristic: biospecimen repository sample id

text: Cervical lymph node

characteristic: body site

text: Follicular lymphoma

characteristic: histological type

text: Yes

text: Homo sapiens

text: female

text: Case Set

text: Tumor RNA sample from Cervical lymph node of a human female participant in the dbGaP study "Single-Cell Genomic Analysis of Lymphoma"


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

text: RNA

text: 33464_lesB_d8_13305A.R01_L007790_scRNA_742

text: Submandibular lymph node

text: Follicular lymphoma

text: Yes

characteristic: is tumor

text: Homo sapiens

text: male

characteristic: sex

text: Case Set

characteristic: study design

characteristic: study name

text: Tumor RNA sample from Submandibular lymph node of a human male participant in the dbGaP study "Single-Cell Genomic Analysis of Lymphoma"


text: dbGaP

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission package

text: RNA

text: 30134_lesB_wk6_13381A.R01_L009416_scRNA_821

text: Inguinal lymph node

text: Follicular lymphoma

text: Yes

text: Homo sapiens

text: female

text: Case Set

text: Single-Cell Genomic Analysis of Lymphoma

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: SRA accession

text: RNA

characteristic: analyte type

text: 35476_lesA_pre_21317A.R01_L006840_scRNA_670

text: Inguinal lymph node

text: Follicular lymphoma

text: Yes

text: Homo sapiens

characteristic: organism

text: female

text: Case Set

text: Tumor RNA sample from Inguinal lymph node of a human female participant in the dbGaP study "Single-Cell Genomic Analysis of Lymphoma"

characteristic: title


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

text: RNA

characteristic: biospecimen repository

text: 36552_lesA_wk6_13407A.R01_L009425_scRNA_821

characteristic: biospecimen repository sample id

text: Supraclavicular lymph node

characteristic: body site

text: Follicular lymphoma

characteristic: histological type

text: Yes

text: Homo sapiens

text: female

text: Case Set


text: dbGaP

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: RNA

text: 36552_lesB_wk6_13408A.R01_L009426_scRNA_821

text: Inguinal lymph node

text: Follicular lymphoma

text: Yes

characteristic: is tumor

text: Homo sapiens

text: female

characteristic: sex

text: Case Set

characteristic: study design

characteristic: study name


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: RNA

text: 37374_lesA_pre_13431A.R01_L011535_scRNA_940

text: Axillarly lymph node

text: Follicular lymphoma

text: Yes

text: Homo sapiens

text: male

text: Case Set

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Tumor RNA sample from Axillarly lymph node of a human male participant in the dbGaP study "Single-Cell Genomic Analysis of Lymphoma"


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

characteristic: SRA accession

text: RNA

characteristic: analyte type

text: 36552_lesB_d8_13403A.R01_L009423_scRNA_821

text: Inguinal lymph node

text: Follicular lymphoma

text: Yes

text: Homo sapiens

characteristic: organism

text: female

text: Case Set

characteristic: title


text: dbGaP

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: RNA

characteristic: biospecimen repository

text: 35476_lesB_wk6_13296A.R01_L007160_scRNA_670

characteristic: biospecimen repository sample id

text: Submandibular lymph node

characteristic: body site

text: Follicular lymphoma

characteristic: histological type

text: Yes

text: Homo sapiens

text: female

text: Case Set


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: RNA

text: 32892_lesA_wk6_13359A.R01_L009403_scRNA_821

text: Inguinal lymph node

text: Follicular lymphoma

text: Yes

characteristic: is tumor

text: Homo sapiens

text: female

characteristic: sex

text: Case Set

characteristic: study design

characteristic: study name


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission package

text: RNA

text: 37374_lesA_d8_13433A.R01_L011537_scRNA_940

text: Axillarly lymph node

text: Follicular lymphoma

text: Yes

text: Homo sapiens

text: male

text: Case Set

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle


text: dbGaP

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: SRA accession

text: RNA

characteristic: analyte type

text: 33464_lesA_wk6_13316A.R01_L007792_scRNA_742

text: Axillarly lymph node

text: Follicular lymphoma

text: Yes

text: Homo sapiens

characteristic: organism

text: male

text: Case Set

characteristic: title


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: RNA

characteristic: biospecimen repository

text: 37293_lesB_pre_13426A.R01_L011530_scRNA_940

characteristic: biospecimen repository sample id

text: Axillarly lymph node

characteristic: body site

text: Follicular lymphoma

characteristic: histological type

text: Yes

text: Homo sapiens

text: male

text: Case Set


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

text: RNA

text: 30134_lesA_d8_13374A.R01_L009412_scRNA_821

text: Supraclavicular lymph node

text: Follicular lymphoma

text: Yes

characteristic: is tumor

text: Homo sapiens

text: female

characteristic: sex

text: Case Set

characteristic: study design

characteristic: study name

text: Tumor RNA sample from Supraclavicular lymph node of a human female participant in the dbGaP study "Single-Cell Genomic Analysis of Lymphoma"


text: dbGaP

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission package

text: RNA

text: 36840_lesA_pre_13386A.R01_L009428_scRNA_821

text: Inguinal lymph node

text: Follicular lymphoma

text: Yes

text: Homo sapiens

text: female

text: Case Set

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: SRA accession

text: RNA

characteristic: analyte type

text: 31654_lesB_wk6_13418A.R01_L009660_scRNA_862

text: Cervical lymph node

text: Follicular lymphoma

text: Yes

text: Homo sapiens

characteristic: organism

text: male

text: Case Set

text: Tumor RNA sample from Cervical lymph node of a human male participant in the dbGaP study "Single-Cell Genomic Analysis of Lymphoma"

characteristic: title


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

text: RNA

characteristic: biospecimen repository

text: 30021_lesB_d8_19588A.R01_L006325_scRNA_591

characteristic: biospecimen repository sample id

text: Cervical lymph node

characteristic: body site

text: Follicular lymphoma

characteristic: histological type

text: Yes

text: Homo sapiens

text: male

text: Case Set

text: Single-Cell Genomic Analysis of Lymphoma


text: dbGaP

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: RNA

text: 36482_lesA_wk6_19611A.R01_L006697_scRNA_591

text: Axillarly lymph node

text: Follicular lymphoma

text: Yes

characteristic: is tumor

text: Homo sapiens

text: female

characteristic: sex

text: Case Set

characteristic: study design

characteristic: study name

text: Tumor RNA sample from Axillarly lymph node of a human female participant in the dbGaP study "Single-Cell Genomic Analysis of Lymphoma"


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: RNA

text: 36552_lesB_pre_13400A.R01_L009420_scRNA_821

text: Inguinal lymph node

text: Follicular lymphoma

text: Yes

text: Homo sapiens

text: female

text: Case Set

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Tumor RNA sample from Inguinal lymph node of a human female participant in the dbGaP study "Single-Cell Genomic Analysis of Lymphoma"


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

characteristic: SRA accession

text: RNA

characteristic: analyte type

text: 37293_lesB_wk6_13430A.R01_L011534_scRNA_940

text: Axillarly lymph node

text: Follicular lymphoma

text: Yes

text: Homo sapiens

characteristic: organism

text: male

text: Case Set

text: Tumor RNA sample from Axillarly lymph node of a human male participant in the dbGaP study "Single-Cell Genomic Analysis of Lymphoma"

characteristic: title


text: dbGaP

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: RNA

characteristic: biospecimen repository

text: 37293_lesA_wk6_13429A.R01_L011533_scRNA_940

characteristic: biospecimen repository sample id

text: Axillarly lymph node

characteristic: body site

text: Follicular lymphoma

characteristic: histological type

text: Yes

text: Homo sapiens

text: male

text: Case Set


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: RNA

text: 34842_lesA_d8_13310A.R01_L007768_scRNA_742

text: Inguinal lymph node

text: Follicular lymphoma

text: Yes

characteristic: is tumor

text: Homo sapiens

text: female

characteristic: sex

text: Case Set

characteristic: study design

characteristic: study name


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission package

text: RNA

text: 35476_lesA_wk6_13295A.R01_L007159_scRNA_670

text: Inguinal lymph node

text: Follicular lymphoma

text: Yes

text: Homo sapiens

text: female

text: Case Set

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle


text: dbGaP

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: SRA accession

text: RNA

characteristic: analyte type

text: 36482_lesB_wk6_19612A.R01_L006698_scRNA_591

text: Axillarly lymph node

text: Follicular lymphoma

text: Yes

text: Homo sapiens

characteristic: organism

text: female

text: Case Set

characteristic: title


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: RNA

characteristic: biospecimen repository

text: 30021_lesB_wk6_19621A.R01_L006701_scRNA_591

characteristic: biospecimen repository sample id

text: Cervical lymph node

characteristic: body site

text: Follicular lymphoma

characteristic: histological type

text: Yes

text: Homo sapiens

text: male

text: Case Set


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

text: RNA

text: 36510_lesA_d8_19641A.R01_L006748_scRNA_670

text: Inguinal lymph node

text: Follicular lymphoma

text: Yes

characteristic: is tumor

text: Homo sapiens

text: female

characteristic: sex

text: Case Set

characteristic: study design

characteristic: study name


text: Lanzhou Institute of Husbandry and Pharmaceutical Sciences, Chinese Academy of Agricultural Sciences

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: missing

text: missing

text: cattle

characteristic: host

text: missing

text: missing

text: bovine metagenome

text: Metagenome or environmental sample from bovine metagenome

characteristic: tmp


text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: SRA accession

text: missing

text: missing

text: cattle

text: missing

text: missing

text: bovine gut metagenome

characteristic: organism

text: Metagenome or environmental sample from bovine gut metagenome

characteristic: title


text: live

text: Metagenome or environmental

characteristic: NCBI submission model

text: missing

text: missing

text: cattle

text: missing

text: missing

text: oral metagenome

text: Metagenome or environmental sample from oral metagenome


text: PulseNet Next Generation Subtyping Methods Unit

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

text: missing

text: USA

text: missing

text: missing

text: missing

characteristic: isolate

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: enteritidis

characteristic: serovar

text: human

characteristic: strain

text: Salmonella enterica


characteristic: External Id

characteristic: INSDC center name

text: live

text: Pathogen.cl

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Anatum

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Typhimurium

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: I 4:b:-

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Oranienburg

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Listeria monocytogenes

text: missing

text: missing

text: missing

text: human

text: Listeria monocytogenes


text: University of Hong Kong

text: live

text: Human

text: Day 25

characteristic: age

text: Rio Sugimura

text: hEPSC

text: Hong Kong

text: Organoid

text: Homo sapiens

text: female

characteristic: sex

text: Organoids

characteristic: tissue

text: Human sample from Homo sapiens

text: Mock

characteristic: treatment


text: Marine Biological Laboratory

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: MIMARKS.survey

characteristic: NCBI submission package

characteristic: depth

text: Keywords: GSC:MIxS;MIMARKS:6.0

characteristic: description

text: missing

characteristic: elevation

text: terrestrial

text: bore hole

text: rock

text: India

characteristic: label

text: 17.131944 N 73.870833 E

text: subsurface metagenome

text: granite

text: MIMARKS Survey related sample from subsurface metagenome


text: Marine Biological Laboratory

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIMARKS.survey

characteristic: NCBI submission model

characteristic: SRA accession

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: missing

text: terrestrial

text: bore hole

text: rock

text: India

text: 17.131944 N 73.870833 E

text: subsurface metagenome

characteristic: organism

text: amygdaloidal basalt

characteristic: title


characteristic: External Id

text: Marine Biological Laboratory

characteristic: INSDC center name

text: live

text: MIMARKS.survey

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: missing

text: terrestrial

text: bore hole

text: rock

text: India

text: 17.131944 N 73.870833 E

text: subsurface metagenome

text: massive basalt


text: Marine Biological Laboratory

text: live

text: MIMARKS.survey

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: missing

text: terrestrial

text: bore hole

text: rock

text: India

text: 17.131944 N 73.870833 E

text: subsurface metagenome

text: basalt


text: Marine Biological Laboratory

text: live

text: MIMARKS.survey

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: missing

text: terrestrial

text: bore hole

text: rock

text: India

text: 17.131944 N 73.870833 E

text: subsurface metagenome

text: transition zone


text: Marine Biological Laboratory

text: live

text: MIMARKS.survey

text: not applicable

text: not applicable

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: subsurface metagenome

text: control blank


text: live

text: Pathogen.cl

text: CDC

text: missing

text: USA

text: missing

characteristic: host

text: missing

text: missing

characteristic: isolate

text: missing

text: missing

text: missing

text: Escherichia coli

text: missing

characteristic: serovar

characteristic: strain

text: Escherichia coli


text: Texas Department of State Health Services-ARLN/HAI-Seq submission group

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: USA

text: Homo sapiens

text: missing

text: blood

text: Neisseria meningitidis

text: whole organism

text: Microbe sample from Neisseria meningitidis


text: Centers for Disease Control and Prevention Enteric Diseases Laboratory Branch

text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Vibrio parahaemolyticus

text: PulseNet

text: missing

text: missing

text: human

text: Vibrio parahaemolyticus


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Vibrio cholerae

text: PulseNet

text: missing

text: missing

text: human

text: Vibrio cholerae


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Vibrio fluvialis

text: PulseNet

text: missing

text: missing

text: human

text: Vibrio fluvialis


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Vibrio alginolyticus

text: PulseNet

text: missing

text: missing

text: human

text: Vibrio alginolyticus


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Vibrio vulnificus

text: PulseNet

text: missing

text: missing

text: human

text: Vibrio vulnificus


CCEG

text: Wenzhou-Kean University

text: live

text: Human

characteristic: age

text: DR. FERDINAND KAPPES

text: HaLa S3

text: Homo sapiens

text: missing

characteristic: sex

text: cervical

characteristic: tissue

text: Human sample from Homo sapiens


HC child B13

text: KU Leuven

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Human

text: Isabelle Meyts, Laboratory for Inborn Errors of Immunity, Department of Microbiology, Immunology and Transplantation, KU Leuven, Leuven, Belgium, EU

text: Belgium

text: Healthy control child, boy, age 13

text: Homo sapiens

text: male

text: Peripheral blood


HC child G14

text: KU Leuven

text: live

text: Human

characteristic: NCBI submission model

characteristic: SRA accession

text: Belgium

text: Healthy control child, girl, age 14

text: Homo sapiens

text: female

text: Peripheral blood


HC adult M

text: KU Leuven

text: live

text: Human

text: Adult

text: Belgium

text: Healthy control, male, adult

text: Homo sapiens

characteristic: organism

text: male

text: Peripheral blood

characteristic: title


HC adult F

characteristic: External Id

text: KU Leuven

characteristic: INSDC center name

text: live

text: Human

text: Adult

text: Belgium

text: Healthy control, female, adult

text: Homo sapiens

text: female

text: Peripheral blood


text: KU Leuven

text: live

text: Human

text: Adult

text: Belgium

text: Carrier p.R1142X COPA mutation, father of index

characteristic: isolate

text: Homo sapiens

text: male

text: Peripheral blood


text: KU Leuven

text: live

text: Human

text: Belgium

text: Patient, heterozygous for p.R1142X COPA mutation

text: Homo sapiens

text: female

text: Peripheral blood


text: KU Leuven

text: live

text: Human

text: Adult

text: Carla M. Davis, Division of Immunology, Allergy and Retrovirology, Baylor College of Medicine, Texas Children's Hospital, 1102 Bates Avenue, MC 330.01, Houston, TX, 77030, USA

text: USA: Texas

text: Carrier p.C1013S COPA mutation, father of patients

text: Homo sapiens

text: male

text: Peripheral blood


text: KU Leuven

text: live

text: Human

text: USA: Texas

text: Patient 1, heterozygous for p.C1013S COPA mutation

text: Homo sapiens

text: male

text: Peripheral blood


text: KU Leuven

text: live

text: Human

text: USA: Texas

text: Patient 2, heterozygous for p.C1013S COPA mutation

text: Homo sapiens

text: female

text: Peripheral blood


text: KU Leuven

text: live

text: Human

text: USA: Texas

text: Patient 3, heterozygous for p.C1013S COPA mutation

text: Homo sapiens

text: male

text: Peripheral blood


text: KU Leuven

text: live

text: Human

text: USA: Texas

text: Patient 4, heterozygous for p.C1013S COPA mutation

text: Homo sapiens

text: male

text: Peripheral blood


SAVI patient

text: KU Leuven

text: live

text: Human

text: Belgium

text: Patient, heterozygous for p.V155M STING mutation

text: Homo sapiens

text: female

text: Peripheral blood


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

characteristic: host

text: missing

text: missing

text: missing

text: missing

text: missing

text: Shigella flexneri

characteristic: serovar

text: Shigella flexneri


characteristic: INSDC first public

text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Escherichia coli

characteristic: strain

text: Escherichia coli


characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: USA

text: Homo sapiens

text: missing

text: urine

text: Acinetobacter baumannii

text: whole organism

text: Microbe sample from Acinetobacter baumannii


text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: missing

text: wound

text: Acinetobacter baumannii

text: whole organism


text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: missing

text: tracheal aspirate

text: Acinetobacter baumannii

text: whole organism


text: live

text: Pathogen.cl

text: SC

text: USA:SC

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: South Carolina Department of Health and Environmental Control

text: Poona

text: missing

text: Salmonella enterica


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Vibrio cholerae

text: PulseNet

text: missing

text: missing

text: human

text: Vibrio cholerae


text: PulseNet Next Generation Subtyping Methods Unit

text: live

text: Pathogen.cl

text: SC

text: USA:SC

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: Newport

text: missing

text: Salmonella enterica


text: live

text: Pathogen.cl

text: SC

text: USA:SC

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: Mississippi

text: missing

text: Salmonella enterica


text: live

text: Pathogen.cl

text: SC

text: USA:SC

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: Sundsvall

text: missing

text: Salmonella enterica


text: live

text: Pathogen.cl

text: SC

text: USA:SC

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: muenchen

text: missing

text: Salmonella enterica


name: Acyrthosiphon pisum Lathyrus biotype poolseq

text: INRAE

text: live

text: Invertebrate

text: INRAE

text: Jean-Christophe Simon and Julie Jaquiery

text: pool of 19 clones

characteristic: description

text: adult

text: France

text: Lathyrus

text: Lat

text: Acyrthosiphon pisum

text: female

characteristic: sex

text: whole body


characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Vibrio parahaemolyticus

text: PulseNet

text: missing

text: missing

text: human

text: Vibrio parahaemolyticus


text: live

characteristic: INSDC status

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Listeria monocytogenes

text: missing

text: Listeria monocytogenes


text: live

text: Pathogen.cl

characteristic: NCBI submission model

text: CDC

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Vibrio cholerae

text: PulseNet

text: missing

text: missing

text: human

text: Vibrio cholerae


text: Universidade de Sao Paulo

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: Surface

characteristic: depth

text: Water viral metagenomics

text: Brazil

text: Water

text: Environment

text: 23.1123 S 47.7229 W

text: human viral metagenome

text: Tiete


text: Universidade de Sao Paulo

text: live

text: Metagenome or environmental

text: Surface

text: Water viral metagenomics

text: Brazil

text: Water

text: Environment

text: 23.674411 S 46.726477 W

text: human viral metagenome

characteristic: organism

text: Guarapiranga

characteristic: title


characteristic: External Id

text: Minnesota Department of Health Infectious Disease Laboratory Submission Group

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: CARRIS HEALTH - WILLMAR MAIN CLINIC

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: baseline surveillance (random sampling)

text: Minnesota Department of Health, Public Health Laboratory

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: CARRIS HEALTH - WILLMAR MAIN CLINIC

text: USA: Minnesota

text: Homo sapiens

characteristic: host

characteristic: isolate

text: nasopharynx

text: Severe acute respiratory syndrome coronavirus 2

text: baseline surveillance (random sampling)


characteristic: INSDC first public

text: live

text: SARS-CoV-2: clinical or host-associated

text: CENTRACARE LABORATORY SERVICES

text: USA: Minnesota

text: Homo sapiens

text: oropharynx

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: CENTRACARE LABORATORY SERVICES

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx


text: live

text: SARS-CoV-2: clinical or host-associated

text: RIDGEVIEW MEDICAL CENTER

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: FAIRVIEW RIDGES HOSPITAL

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx


text: live

text: SARS-CoV-2: clinical or host-associated

text: ALLINA HEALTH LABORATORY - ABBOTT NORTHWESTERN

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: MAPLE GROVE HOSPITAL

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: GLACIAL RIDGE - GLENWOOD MEDICAL CENTER

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: SANFORD BEMIDJI MEDICAL CENTER

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: CARRIS HEALTH - RICE MEMORIAL HOSPITAL

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: CENTRACARE LABORATORY SERVICES

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: HEALTHEAST - ST JOHNS HOSPITAL

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx


text: live

text: SARS-CoV-2: clinical or host-associated

text: CCM HEALTH MONTEVIDEO CLINIC

text: USA: Minnesota

text: Homo sapiens

text: nares

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: NORTH MEMORIAL HOSPITAL

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: RIVERVIEW HEALTH

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: missing

text: missing

text: USA:WI

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

characteristic: serovar

characteristic: strain

text: Salmonella enterica


characteristic: INSDC last update

text: live

text: Pathogen.cl

characteristic: NCBI submission package

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Escherichia coli

text: missing

text: missing

text: human

text: Escherichia coli


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Listeria monocytogenes

text: missing

text: missing

text: missing

text: human

text: Listeria monocytogenes


text: live

text: Pathogen.cl

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Shigella sp. PNUSAE161913

text: missing

text: missing

text: missing

text: human

text: Shigella sp.


text: live

text: SARS-CoV-2: clinical or host-associated

text: CENTRACARE LABORATORY SERVICES

text: USA: Minnesota

text: Homo sapiens

text: oropharynx

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: RIDGEVIEW MEDICAL CENTER

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx


text: live

text: SARS-CoV-2: clinical or host-associated

text: CCM HEALTH MONTEVIDEO CLINIC

text: USA: Minnesota

text: Homo sapiens

text: nares


text: live

text: SARS-CoV-2: clinical or host-associated

text: LAKE REGION HEALTHCARE

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: FAIRVIEW SOUTHDALE HOSPITAL

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx


text: live

text: SARS-CoV-2: clinical or host-associated

text: UNIVERSITY OF MINNESOTA - INFECTIOUS DISEASE DIAGNOSTIC LABO

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Minnesota

text: Homo sapiens

text: nares

text: baseline surveillance (random sampling)


text: University of Illinois at Urbana Champaign

text: live

text: SARS-CoV-2: clinical or host-associated

text: SHIELD campus surveillance testing program

text: USA: Illinois, CHAMPAIGN

text: Homo sapiens

text: resequenced saliva control


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Illinois, CHAMPAIGN

text: Homo sapiens

text: resequenced nasal swab


text: live

text: Pathogen.cl

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Shigella sp. PNUSAE161914

text: missing

text: missing

text: missing

text: human

text: Shigella sp.


text: live

text: Pathogen.cl

text: CDC

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Campylobacter jejuni

text: missing

text: Campylobacter jejuni


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: Javiana

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: enteritidis

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: Livingstone

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: Sundsvall

text: Salmonella enterica


text: live

text: Pathogen.cl

text: CDC

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Escherichia coli

text: missing

text: Escherichia coli


Dogfish

text: Vanderbilt University

text: live

text: Model organism or animal

text: Dogfish kidney transcriptome

characteristic: description

text: adult

text: Atlantic wildtype Squalus acanthias

characteristic: ecotype

text: USA

text: Squalus acanthias

text: male

characteristic: sex

text: kidney

characteristic: tissue

text: Model organism or animal sample from Squalus acanthias


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: SRA accession

text: SC

text: USA:SC

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: Newport

text: missing

text: Salmonella enterica


characteristic: External Id

text: live

text: Pathogen.cl

text: SC

text: USA:AZ

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

characteristic: organism

text: missing

text: enteritidis

text: missing

text: Salmonella enterica

characteristic: title


text: University of Iowa

characteristic: INSDC center name

text: live

text: Pathogen.cl

text: missing

text: USA

text: Homo sapiens

characteristic: host

text: missing

characteristic: isolate

text: missing

text: missing

text: Providencia stuartii

text: Pathogen: clinical or host-associated sample from Providencia stuartii


text: University of Iowa

characteristic: INSDC first public

text: live

text: Pathogen.cl

text: missing

text: USA

text: Homo sapiens

text: missing

text: urine

text: missing

text: Citrobacter freundii

text: Pathogen: clinical or host-associated sample from Citrobacter freundii


text: University of Iowa

characteristic: INSDC last update

text: live

text: Pathogen.cl

text: missing

text: USA

text: Homo sapiens

text: missing

text: urine

text: missing

text: Escherichia coli

text: Pathogen: clinical or host-associated sample from Escherichia coli


text: University of Iowa

text: live

text: Pathogen.cl

characteristic: NCBI submission package

text: missing

text: USA

text: Homo sapiens

text: missing

text: urine

text: missing

text: Klebsiella pneumoniae

text: Pathogen: clinical or host-associated sample from Klebsiella pneumoniae


text: USDA Animal Plant Health Inspection Service-National Veterinary Services Laboratories - DBPL

text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: Auburn University Bacteriology and Mycology Diagnostic Laboratory, Auburn, AL

text: clinical isolate

characteristic: description

text: USA: AL

text: Sus scrofa

text: Pneumonia

text: tonsil swab

text: Streptococcus suis

text: NAHLN (USDA-APHIS-VS) Veterinary Pathogen Umbrella Project

text: active surveillance not initiated by an outbreak

text: animal

text: not applicable

characteristic: strain

text: One Health Enteric sample from Streptococcus suis


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: California Animal Health & Food Safety Laboratory System, Davis, CA

text: clinical isolate

text: USA: CA

text: Sus scrofa

text: Bronchopneumonia

text: Specimen from lung

text: Streptococcus suis

text: National Veterinary Services Laboratories

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: CA

text: Sus scrofa

text: Fibrinosuppurative pleruitis

text: Pleural fluid

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: CA

text: Sus scrofa

text: Aborted fetus with intraalveolar bacteria

text: lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: CA

text: Sus scrofa

text: Bronchointerstitial pneumonia

text: Bronchial Swab

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: CA

text: Sus scrofa

text: Chronic crusty ears

text: Ear swab

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: Bronson Animal Disease Diagnostic Laboratory, Kissimmee, FL

text: clinical isolate

text: USA: FL

text: Sus scrofa

text: Necropsy

text: lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: Purdue University Animal Disease Diagnostic Laboratory, West Lafayette, IN

text: clinical isolate

text: USA: IN

text: Sus scrofa

text: suppurative pleuritis (gr 3)

text: Specimen from lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: IN

text: Sus scrofa

text: streptococcal sepsis

text: brain

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: IN

text: Sus scrofa

text: bacterial pneumonia

text: lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: IN

text: Sus scrofa

text: Ulcerative colitis

text: kidney

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: IN

text: Sus scrofa

text: Chronic fibrinous pleuritis

text: lung pool

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: IN

text: Sus scrofa

text: polyserositis

text: back brain

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: IN

text: Sus scrofa

text: lymphohistiocytic myocarditis

text: heart

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: IN

text: Sus scrofa

text: menginitis

text: brain

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: IN

text: Sus scrofa

text: Pleuropneumonia, fibrinosuppurative

text: brain

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: IN

text: Sus scrofa

text: Bronchopneumonia, chronic active, suppurative

text: lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: IN

text: Sus scrofa

text: Porcine reproductive and respiratory syndrome

text: lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: Kansas State University Veterinary Diagnostic Laboratory, Manhattan, KS

text: clinical isolate

text: USA: KS

text: Sus scrofa

text: Septicemia

text: Specimen from lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: KS

text: Sus scrofa

text: Pneumonia

text: Specimen from lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: University of Kentucky Veterinary Diagnostic Laboratory, Lexington, KY

text: clinical isolate

text: USA: KY

text: Sus scrofa

text: severe lymphohistiocytic and suppurative bronchointerstitial pneumonia

text: Specimen from lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: University of Minnesota Veterinary Diagnostic Laboratory, St. Paul, MN

text: clinical isolate

text: USA: MN

text: Sus scrofa

text: Purulent meningitis

text: Specimen from brain

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: MN

text: Sus scrofa

text: septicemia

text: Meninges

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: MN

text: Sus scrofa

text: undetermined

text: Specimen from brain

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: MN

text: Sus scrofa

text: endocarditis

text: Heart valve

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: MN

text: Sus scrofa

text: pneumonia

text: Specimen from brain

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: MN

text: Sus scrofa

text: Streptococcus suis septicemia

text: brain

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: MN

text: Sus scrofa

text: septicemia, Streptococcus suis

text: Specimen from brain

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: MN

text: Sus scrofa

text: Vegetative endocarditis

text: Heart Valve

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: MN

text: Sus scrofa

text: acute pleuritis

text: pleura

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: MN

text: Sus scrofa

text: Purulent bronchopneumonia

text: pericardial

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: University of Missouri Veterinary Medical Diagnostic Laboratory, Columbia, MO

text: clinical isolate

text: USA: MO

text: Sus scrofa

text: S. suis isolated

text: liver

text: Streptococcus suis

text: animal

text: not applicable


text: USDA Animal Plant Health Inspection Service-National Veterinary Services Laboratories - DBPL

text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: MO

text: Sus scrofa

text: suppurative arthritis

text: joint swab

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: MO

text: Sus scrofa

text: Bronchointerstitial pneumonia

text: Specimen from lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: MO

text: Sus scrofa

text: Suppurative pneumonia

text: Specimen from lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: North Dakota State University Veterinary Diagnostic Laboratory, Fargo, ND

text: clinical isolate

text: USA: ND

text: Sus scrofa

text: Endocarditis

text: Heart valve

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: ND

text: Sus scrofa

text: Bacterial Meningitis

text: Specimen from lung

text: Streptococcus suis

text: NAHLN (USDA-APHIS-VS) Veterinary Pathogen Umbrella Project

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: ND

text: Sus scrofa

text: Pulmonary edema

text: Specimen from lung

text: Streptococcus suis

text: active surveillance not initiated by an outbreak

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: ND

text: Sus scrofa

text: Systemic arteritits

text: Specimen from lung

text: Streptococcus suis

text: animal

text: not applicable

text: One Health Enteric sample from Streptococcus suis


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: ND

text: Sus scrofa

text: Pneumonia

text: Specimen from lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: University of Nebraska Veterinary Diagnostic Center, Lincoln, NE

text: clinical isolate

text: USA: NE

text: Sus scrofa

text: Salmonellosis

text: Specimen from lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: NE

text: Sus scrofa

text: Bacterial abortion

text: Specimen from placenta

text: Streptococcus suis

text: National Veterinary Services Laboratories

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: NE

text: Sus scrofa

text: Pneumonia

text: Specimen from lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: NE

text: Sus scrofa

text: Meningitis

text: Specimen from lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: NE

text: Sus scrofa

text: Pneumoniae

text: lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: NE

text: Sus scrofa

text: lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: Cornell Animal Health Diagnostic Center, Ithaca, NY

text: clinical isolate

text: USA: NY

text: Sus scrofa

text: Respiratory infection

text: nasal

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: NY

text: Sus scrofa

text: Respiratory infection

text: lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: NY

text: Sus scrofa

text: Infection

text: lymph node

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: Ohio Department of Agriculture Animal Disease Diagnostic Laboratory, Reynoldsburg, OH

text: clinical isolate

text: USA: OH

text: Sus scrofa

text: Suppartive pneumonia

text: Specimen from lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: OH

text: Sus scrofa

text: Systemic infection

text: Abdominal Swab

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: OH

text: Sus scrofa

text: Joint Swab

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: OH

text: Sus scrofa

text: Spinal Swab

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: South Dakota State University Animal Disease Research and Diagnostics Laboratory, Brookings, SD

text: clinical isolate

text: USA: SD

text: Sus scrofa

text: Pneumonia and Polyserositis

text: spleen

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: SD

text: Sus scrofa

text: Enteritis Case

text: lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: SD

text: Sus scrofa

text: Bacterial Septicemia

text: lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: SD

text: Sus scrofa

text: Bronchopneumonia

text: lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: SD

text: Sus scrofa

text: Pneumonia, enteritis

text: cerebellum

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: SD

text: Sus scrofa

text: Epicarditis

text: Heart Surface

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: SD

text: Sus scrofa

text: Pneumonia

text: lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: SD

text: Sus scrofa

text: Bronchopneumonia

text: cerebellum

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: SD

text: Sus scrofa

text: Pneumonia and septicemia

text: brain

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: SD

text: Sus scrofa

text: Suppurative bronchopneumonia

text: lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: SD

text: Sus scrofa

text: Pneumonia

text: liver

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: Washington State University Animal Disease Diagnostic Laboratory, Pullman, WA

text: clinical isolate

text: USA: WA

text: Sus scrofa

text: Meningitis

text: Specimen from brain

text: Streptococcus suis

text: animal

text: not applicable


text: U.S. Army Engineer Research and Development Center

text: live

text: Metagenome or environmental

text: USA: Alabama, Mobile

text: tidal typha marsh

text: 30.43 N 87.57 W

text: wetland metagenome

text: soil core sample 1

text: Qiagen PoweSoil Pro

text: 0.25 g

text: Metagenome or environmental sample from wetland metagenome


text: live

text: Metagenome or environmental

text: USA: Alabama, Mobile

text: tidal typha marsh

text: 30.43 N 87.57 W

text: wetland metagenome

text: soil core sample 2

text: Qiagen PoweSoil Pro

text: 0.25 g


text: live

text: Metagenome or environmental

text: USA: Alabama, Mobile

text: tidal typha marsh

text: 30.43 N 87.57 W

text: wetland metagenome

text: soil core sample 3

text: Qiagen PoweSoil Pro

text: 0.25 g


text: live

text: Metagenome or environmental

text: USA: Alabama, Mobile

text: tidal typha marsh

text: 30.43 N 87.57 W

text: wetland metagenome

text: soil core sample 4

text: Qiagen PoweSoil Pro

text: 0.25 g


text: live

text: Metagenome or environmental

text: USA: Alabama, Mobile

text: tidal typha marsh

text: 30.43 N 87.57 W

text: wetland metagenome

text: soil core sample 5

text: Qiagen PoweSoil Pro

text: 0.25 g


text: live

text: Metagenome or environmental

text: USA: Alabama, Mobile

text: tidal typha marsh

text: 30.43 N 87.57 W

text: wetland metagenome

text: soil core sample 6

text: Qiagen PoweSoil Pro

text: 0.25 g


text: live

text: Metagenome or environmental

text: USA: Alabama, Mobile

text: tidal typha marsh

text: 30.43 N 87.57 W

text: wetland metagenome

text: soil core sample 7

text: Qiagen PoweSoil Pro

text: 0.25 g


text: live

text: Metagenome or environmental

text: USA: Alabama, Mobile

text: tidal typha marsh

text: 30.43 N 87.57 W

text: wetland metagenome

text: soil core sample 8

text: Qiagen PoweSoil Pro

text: 0.25 g


text: live

text: Metagenome or environmental

text: USA: Alabama, Mobile

text: tidal typha marsh

text: 30.43 N 87.57 W

text: wetland metagenome

text: soil core sample 9

text: Qiagen PoweSoil Pro

text: 0.25 g


text: live

text: Metagenome or environmental

text: USA: Alabama, Mobile

text: tidal typha marsh

text: 30.43 N 87.57 W

text: wetland metagenome

text: soil core sample 10

text: Qiagen PoweSoil Pro

text: 0.25 g


text: live

text: Metagenome or environmental

text: USA: Alabama, Mobile

text: tidal typha marsh

text: 30.43 N 87.57 W

text: wetland metagenome

text: soil core sample 11

text: Qiagen PoweSoil Pro

text: 0.25 g


text: live

text: Metagenome or environmental

text: USA: Alabama, Mobile

text: tidal typha marsh

text: 30.43 N 87.57 W

text: wetland metagenome

text: soil core sample 12

text: Qiagen PoweSoil Pro

text: 0.25 g


text: live

text: Metagenome or environmental

text: USA: Alabama, Mobile

text: tidal typha marsh

text: 30.43 N 87.57 W

text: wetland metagenome

text: soil core sample 13

text: Qiagen PoweSoil Pro

text: 0.25 g


text: live

text: Metagenome or environmental

text: USA: Alabama, Mobile

text: tidal typha marsh

text: 30.43 N 87.57 W

text: wetland metagenome

text: soil core sample 14

text: Qiagen PoweSoil Pro

text: 0.25 g


text: live

text: Metagenome or environmental

text: USA: Alabama, Mobile

text: tidal typha marsh

text: 30.43 N 87.57 W

text: wetland metagenome

text: soil core sample 15

text: Qiagen PoweSoil Pro

text: 0.25 g


text: live

text: Metagenome or environmental

text: USA: Alabama, Mobile

text: tidal typha marsh

text: 30.43 N 87.57 W

text: wetland metagenome

text: soil core sample 16

text: Qiagen PoweSoil Pro

text: 0.25 g