text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1190081001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


status: PUBLIC

characteristic: External Id

text: CT State Public Health Laboratory Submission Group

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: CT Department of Public Health

tag: attribute

text: USA: Connecticut

text: Homo sapiens

characteristic: host

text: SARS-CoV-2/Human/USA/CT-DPH-1190084001/2023

characteristic: isolate

text: clinical

characteristic: organism

text: Random sampling

text: Baseline Surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2

characteristic: title


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1190087001/2023

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1190099001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1190308001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1190309001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1190315001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1190317001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1190320001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1190324001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1190326001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1190451001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1190452001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1190453001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1190454001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: CT State Public Health Laboratory Submission Group

text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1190455001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1190456001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1190459001/2023

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Random sampling

text: Baseline Surveillance


text: PulseNet Next Generation Subtyping Methods Unit

text: live

text: Pathogen.cl

text: CDC

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: PulseNet

text: Texas Department of State Health Services

text: missing

characteristic: serovar

text: human

characteristic: strain

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Escherichia coli

text: missing

text: Escherichia coli


text: live

text: Pathogen.cl

text: CDC

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: Salmonella enterica


text: Vet-LIRN: Washington State University, Animal Disease Diagnostic Laboratory

text: live

text: One Health Enteric

text: University of Kentucky Veterinary Diagnostic Laboratory

text: USA:KY

text: Canis lupus familiaris

text: skin

text: Staphylococcus pseudintermedius

text: Vet-LIRN-Staph-WA

text: not collected

text: Washington State University Washington Animal Disease Diagnostic Laboratory

text: animal

text: One Health Enteric sample from Staphylococcus pseudintermedius


text: University of Michigan

text: live

text: Model organism or animal

text: This sample group is the combination of the 4 individual BioSamples: SAMN38918186, SAMN38918187, SAMN38918188, and SAMN38918189.

characteristic: derived-from

text: Juvenile/Tadpole

text: USA: (Captive Bred)

text: Phyllobates terribilis

text: not determined

characteristic: sex

text: Yellow

text: Muscle, liver

characteristic: tissue

text: Model organism or animal sample from Phyllobates terribilis


characteristic: External Id

characteristic: INSDC center name

text: live

text: Pathogen.cl

text: CDC

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Escherichia coli

text: missing

text: Escherichia coli


text: University of Wisconsin-Madison

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: missing

text: not applicable

text: Homo sapiens

text: Mycobacterium tuberculosis H37Rv

text: cell culture

text: Microbe sample from Mycobacterium tuberculosis H37Rv

text: type strain of Mycobacterium tuberculosis

characteristic: type-material


text: New York Medical College

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

text: NYMC

text: USA

text: Homo sapiens

text: Streptococcus pyogenes

text: Pathogen: clinical or host-associated sample from Streptococcus pyogenes


text: New York Medical College

text: live

text: Pathogen.cl

characteristic: NCBI submission package

characteristic: SRA accession

text: NYMC

text: Czech Republic

text: Homo sapiens

characteristic: host

text: Streptococcus pyogenes


text: New York Medical College

text: live

text: Pathogen.cl

text: NYMC

text: India

text: Homo sapiens

text: Streptococcus pyogenes

characteristic: organism

characteristic: title


text: New York Medical College

text: live

text: Pathogen.cl

text: NYMC

text: Brazil

text: Homo sapiens

text: Streptococcus pyogenes

characteristic: strain


text: New York Medical College

text: live

text: Pathogen.cl

text: NYMC

text: Ethiopia

text: Homo sapiens

text: Streptococcus pyogenes


text: New York Medical College

text: live

text: Pathogen.cl

text: NYMC

text: Mexico

text: Homo sapiens

text: Streptococcus pyogenes


text: New York Medical College

text: live

text: Pathogen.cl

text: NYMC

text: Taiwan

text: Homo sapiens

text: Streptococcus pyogenes


text: New York Medical College

text: live

text: Pathogen.cl

text: NYMC

text: Japan

text: Homo sapiens

text: Streptococcus pyogenes


text: New York Medical College

text: live

text: Pathogen.cl

text: NYMC

text: United Kingdom

text: Homo sapiens

text: Streptococcus pyogenes


text: New York Medical College

text: live

text: Pathogen.cl

text: NYMC

text: Malaysia

text: Homo sapiens

text: Streptococcus pyogenes


text: New York Medical College

text: live

text: Pathogen.cl

text: NYMC

text: China

text: Homo sapiens

text: Streptococcus pyogenes


text: NJDOH PHEL-Virology's shared submissions

text: live

text: SARS-CoV-2: clinical or host-associated

text: NJDOH, Public Health and Environmental Laboratories

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23019017/2023

characteristic: isolate

text: clinical

text: clinical diagnostic

text: Targeted Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23019025/2023

text: clinical

text: clinical diagnostic

text: Targeted Surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23019026/2023

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: clinical diagnostic

text: Targeted Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23019061/2023

text: clinical

text: clinical diagnostic

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23019081/2023

text: clinical

text: clinical diagnostic

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23019101/2023

text: clinical

text: clinical diagnostic

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23019102/2023

text: clinical

text: clinical diagnostic

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23019185/2023

text: clinical

text: clinical diagnostic

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23019186/2023

text: clinical

text: clinical diagnostic

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23019195/2023

text: clinical

text: clinical diagnostic

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23019196/2023

text: clinical

text: clinical diagnostic

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23019197/2023

text: clinical

text: clinical diagnostic

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23019198/2023

text: clinical

text: clinical diagnostic

text: Baseline Surveillance


text: NJDOH PHEL-Virology's shared submissions

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23019199/2023

text: clinical

text: clinical diagnostic

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: NJDOH, Public Health and Environmental Laboratories

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23019200/2023

text: clinical

text: clinical diagnostic

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23019232/2023

text: clinical

text: clinical diagnostic

text: Baseline Surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23019234/2023

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: clinical diagnostic

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23019235/2023

text: clinical

text: clinical diagnostic

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23019240/2023

text: clinical

text: clinical diagnostic

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23019244/2023

text: clinical

text: clinical diagnostic

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23019245/2023

text: clinical

text: clinical diagnostic

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23019247/2023

text: clinical

text: clinical diagnostic

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23019512/2023

text: clinical

text: clinical diagnostic

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23019513/2023

text: clinical

text: clinical diagnostic

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23019514/2023

text: clinical

text: clinical diagnostic

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23019515/2023

text: clinical

text: clinical diagnostic

text: Baseline Surveillance


text: NJDOH PHEL-Virology's shared submissions

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23019516/2023

text: clinical

text: clinical diagnostic

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: NJDOH, Public Health and Environmental Laboratories

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23019517/2023

text: clinical

text: clinical diagnostic

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23019518/2023

text: clinical

text: clinical diagnostic

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23019519/2023

text: clinical

text: clinical diagnostic

text: Baseline Surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23019520/2023

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: clinical diagnostic

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V23019521/2023

text: clinical

text: clinical diagnostic

text: Baseline Surveillance


text: University of Pittsburgh

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMARKS.survey

text: sinonasal

characteristic: Sample Type

characteristic: Study ID

characteristic: Visit

text: not collected

characteristic: cultivar

text: Keywords: GSC:MIxS;MIMARKS:6.0

characteristic: description

text: not collected

characteristic: ecotype

text: not collected

text: not collected

text: not collected

text: not collected

text: Homo sapiens

text: not collected

text: not collected

text: not collected

text: upper respiratory tract metagenome

text: not collected

text: MIMARKS Survey related sample from upper respiratory tract metagenome


characteristic: External Id

text: University of Pittsburgh

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMARKS.survey

text: environmental control

text: not collected

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: Homo sapiens

text: not collected

text: not collected

text: not collected

text: upper respiratory tract metagenome

text: not collected


text: PulseNet Next Generation Subtyping Methods Unit

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: Newport

characteristic: serovar

text: Salmonella enterica


text: live

text: Pathogen.cl

characteristic: SRA accession

text: missing

text: missing

text: missing

characteristic: host

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

characteristic: organism

text: Typhimurium

characteristic: strain

text: Salmonella enterica

characteristic: title


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

characteristic: isolate

text: missing

text: missing

text: missing

text: Salmonella enterica

text: I 4:i:-

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: enteritidis

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: Needs further review

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: Corvallis

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: Oranienburg

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: Braenderup

text: Salmonella enterica


text: Gansu Agricultural University

text: live

text: Generic

text: missing

text: yellow mutant

characteristic: genotype

text: missing

text: Oncorhynchus mykiss

text: dorsal skin

text: dorsal skin

characteristic: tissue

text: HYs-3 (miRNA-Seq)


characteristic: External Id

text: Gansu Agricultural University

text: live

text: Generic

text: missing

text: yellow mutant

text: missing

text: Oncorhynchus mykiss

text: dorsal skin

text: dorsal skin

text: HYs-2 (miRNA-Seq)


text: Gansu Agricultural University

characteristic: INSDC center name

text: live

text: Generic

text: missing

text: yellow mutant

text: missing

text: Oncorhynchus mykiss

text: dorsal skin

text: dorsal skin

text: HYs-1 (miRNA-Seq)


text: Gansu Agricultural University

characteristic: INSDC first public

text: live

text: Generic

text: missing

text: wild-type

text: missing

text: Oncorhynchus mykiss

text: dorsal skin

text: dorsal skin

text: HWs-3 (miRNA-Seq)


text: Gansu Agricultural University

characteristic: INSDC last update

text: live

text: Generic

text: missing

text: wild-type

text: missing

text: Oncorhynchus mykiss

text: dorsal skin

text: dorsal skin

text: HWs-2 (miRNA-Seq)


text: Gansu Agricultural University

characteristic: INSDC secondary accession

text: live

text: Generic

text: missing

text: wild-type

text: missing

text: Oncorhynchus mykiss

text: dorsal skin

text: dorsal skin

text: HWs-1 (miRNA-Seq)


text: Gansu Agricultural University

text: live

characteristic: INSDC status

text: Generic

text: missing

text: yellow mutant

text: missing

text: Oncorhynchus mykiss

text: dorsal skin

text: dorsal skin

text: HY-3 (RNA-Seq)


text: Gansu Agricultural University

text: live

text: Generic

characteristic: NCBI submission model

text: missing

text: yellow mutant

text: missing

text: Oncorhynchus mykiss

text: dorsal skin

text: dorsal skin

text: HY-2 (RNA-Seq)


text: Gansu Agricultural University

text: live

text: Generic

characteristic: NCBI submission package

text: missing

text: yellow mutant

text: missing

text: Oncorhynchus mykiss

text: dorsal skin

text: dorsal skin

text: HY-1 (RNA-Seq)


text: Gansu Agricultural University

text: live

text: Generic

text: missing

text: wild-type

text: missing

text: Oncorhynchus mykiss

text: dorsal skin

text: dorsal skin

text: HW-3 (RNA-Seq)


text: Gansu Agricultural University

text: live

text: Generic

text: missing

text: wild-type

text: missing

text: Oncorhynchus mykiss

text: dorsal skin

text: dorsal skin

text: HW-2 (RNA-Seq)


text: Gansu Agricultural University

text: live

text: Generic

text: missing

text: wild-type

text: missing

text: Oncorhynchus mykiss

text: dorsal skin

text: dorsal skin

text: HW-1 (RNA-Seq)


text: MDH Core Sequencing Laboratory submission group

text: live

text: One Health Enteric

text: United States Food and Drug Administration|Office of Regulatory Affairs

text: USA:LA

text: environmental swab

text: Legionella pneumophila

text: GenomeTrakr; LFFM-FY4

text: Missing

text: Maryland Department of Health

text: environmental


text: live

text: One Health Enteric

text: USA:LA

text: 1 Liter Bulk Water

text: Legionella pneumophila

text: GenomeTrakr; LFFM-FY4

text: Missing

text: Maryland Department of Health

text: environmental


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Sandiego

characteristic: serovar

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

characteristic: SRA accession

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: enteritidis

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

characteristic: host

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Newport

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

text: CDC

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

characteristic: organism

text: missing

text: Salmonella enterica


text: live

text: Pathogen.cl

text: CDC

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Escherichia coli

text: missing

characteristic: strain

text: Escherichia coli


text: Microbiology and Immunology, Stanford University

text: live

text: Generic

text: female

characteristic: Sex

text: Cy3+HA+ gdT

characteristic: cell type

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 105

characteristic: title

text: No (wild-type, naive)

characteristic: treatment


characteristic: External Id

text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

characteristic: tissue

text: spleen, Cy3+HA+, Smart-seq, cell 104

text: No (wild-type, naive)


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 102

text: No (wild-type, naive)


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 101

text: No (wild-type, naive)


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 100

text: No (wild-type, naive)


text: live

text: Generic

characteristic: NCBI submission package

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 94

text: No (wild-type, naive)


text: live

text: Generic

characteristic: SRA accession

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 93

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 92

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 91

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 90

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 89

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 88

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 87

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 86

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 84

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 83

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 82

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 81

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 80

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 79

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 78

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 76

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 75

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 74

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 73

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 72

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 71

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 70

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 69

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 68

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 67

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 66

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 65

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 64

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 63

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 62

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 61

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 60

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 59

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 58

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 56

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 55

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 54

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 53

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 52

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 51

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 50

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 49

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 48

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 47

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 46

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 45

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 44

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 43

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 42

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 41

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 40

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 39

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 38

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 37

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 36

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 35

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 34

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 33

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 32

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 31

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 30

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 29

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 28

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 27

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 26

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 25

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 24

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 23

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 22

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 21

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 20

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 19

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 18

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 17

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 16

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 15

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 14

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 13

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 12

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 11

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 10

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 9

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 8

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 7

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 6

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 5

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 4

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 3

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 2

text: No (wild-type, naive)


text: live

text: Generic

text: female

text: Cy3+HA+ gdT

text: missing

text: missing

text: Mus musculus

text: spleen

text: spleen

text: spleen, Cy3+HA+, Smart-seq, cell 1

text: No (wild-type, naive)


text: Respiratory and Critical Care Medicine, The Second Affiliated Hospital of Anhui Medical University

text: live

text: Generic

characteristic: cell line

text: missing

text: missing

text: Mus musculus

text: lung

text: lung

text: MLE-12 cells, NP-3 (Ribo-seq)


text: live

text: Generic

text: missing

text: missing

text: Mus musculus

characteristic: organism

text: lung

text: lung

text: MLE-12 cells, NP-2 (Ribo-seq)


text: live

text: Generic

text: missing

text: missing

text: Mus musculus

text: lung

text: lung

text: MLE-12 cells, Ctrl2 (Ribo-seq)

text: control


text: live

text: Generic

text: missing

text: missing

text: Mus musculus

text: lung

text: lung

text: MLE-12 cells, Ctrl1 (Ribo-seq)

text: control


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

characteristic: host

text: missing

text: missing

characteristic: isolate

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

characteristic: serovar

characteristic: strain

text: Salmonella enterica


text: Wyoming Public Health Laboratory

text: live

text: Pathogen.cl

text: WPHL

text: USA: Wyoming

text: Homo sapiens

text: disease by infectious agent

text: clinical

text: 41.1400 N 104.8202 W

text: Pseudomonas aeruginosa

text: genomic sequencing of bacterial isolate WPHL-026046-23

characteristic: title


characteristic: External Id

text: Wyoming Public Health Laboratory

text: live

text: Pathogen.cl

text: WPHL

text: USA: Wyoming

text: Homo sapiens

text: disease by infectious agent

text: clinical

text: 41.1400 N 104.8202 W

text: Enterobacter cloacae

text: genomic sequencing of bacterial isolate WPHL-026171-23


text: Wyoming Public Health Laboratory

text: live

text: Pathogen.cl

text: WPHL

text: USA: Wyoming

text: Homo sapiens

text: disease by infectious agent

text: clinical

text: 41.1400 N 104.8202 W

text: Pseudomonas aeruginosa

text: genomic sequencing of bacterial isolate WPHL-026217-23


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: 16S gene from human sample 1 sequenced with the PacBio Sequel II

characteristic: description

text: Organic Material ENVO:01000155

text: digestive tract environment ENVO:01001033

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome

text: MIMARKS Survey related sample from human gut metagenome


text: Pennsylvania State University

characteristic: INSDC center name

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: 16S gene from human sample 2 sequenced with the PacBio Sequel II

text: Organic Material ENVO:01000155

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome


text: Pennsylvania State University

characteristic: INSDC first public

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: 16S gene from human sample 3 sequenced with the PacBio Sequel II

text: Organic Material ENVO:01000155

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome


text: Pennsylvania State University

characteristic: INSDC last update

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: 16S gene from human sample 4 sequenced with the PacBio Sequel II

text: Organic Material ENVO:01000155

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome


text: Pennsylvania State University

characteristic: INSDC secondary accession

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: 16S gene from human sample 5 sequenced with the PacBio Sequel II

text: Organic Material ENVO:01000155

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome


text: Pennsylvania State University

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: 16S gene from mouse sample 1 sequenced with the PacBio Sequel II

text: Organic Material ENVO:01000155

text: intestinal mucosa UBERON:0001242

text: USA: Pennsylvania

text: Mus musculus

text: mouse gut metagenome

text: MIMARKS Survey related sample from mouse gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

characteristic: NCBI submission model

text: MIMARKS.survey

text: 16S gene from mouse sample 2 sequenced with the PacBio Sequel II

text: Organic Material ENVO:01000155

text: intestinal mucosa UBERON:0001242

text: USA: Pennsylvania

text: Mus musculus

text: mouse gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

characteristic: NCBI submission package

text: 16S gene from mock sample sequenced with the PacBio Sequel II

text: Organic Material ENVO:01000155

text: mock community culture ENVO:01001059

text: mock community culture ENVO:01001059

text: USA

text: Mock

text: synthetic metagenome

text: MIMARKS Survey related sample from synthetic metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

characteristic: SRA accession

text: Bacteroidaceae gyrB gene from human sample 1 sequenced with the PacBio Sequel II

text: Organic Material ENVO:01000155

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Bacteroidaceae gyrB gene from human sample 2 sequenced with the PacBio Sequel II

text: Organic Material ENVO:01000155

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Bacteroidaceae gyrB gene from human sample 3 sequenced with the PacBio Sequel II

text: Organic Material ENVO:01000155

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Bacteroidaceae gyrB gene from human sample 4 sequenced with the PacBio Sequel II

text: Organic Material ENVO:01000155

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Bacteroidaceae gyrB gene from human sample 5 sequenced with the PacBio Sequel II

text: Organic Material ENVO:01000155

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Bacteroidaceae gyrB gene from mouse sample 1 sequenced with the PacBio Sequel II

text: Organic Material ENVO:01000155

text: intestinal mucosa UBERON:0001242

text: USA: Pennsylvania

text: Mus musculus

text: mouse gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Bacteroidaceae gyrB gene from mouse sample 2 sequenced with the PacBio Sequel II

text: Organic Material ENVO:01000155

text: digestive tract environment ENVO:01001033

text: intestinal mucosa UBERON:0001242

text: USA: Pennsylvania

text: Mus musculus

text: mouse gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Bacteroidaceae gyrB gene from mock sample sequenced with the PacBio Sequel II

text: Organic Material ENVO:01000155

text: mock community culture ENVO:01001059

text: mock community culture ENVO:01001059

text: USA

text: Mock

text: synthetic metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Bifidobacteriaceae gyrB gene from human sample 1 sequenced with the PacBio Sequel II

text: Organic Material ENVO:01000155

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome

text: MIMARKS Survey related sample from human gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Bifidobacteriaceae gyrB gene from human sample 2 sequenced with the PacBio Sequel II

text: Organic Material ENVO:01000155

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Bifidobacteriaceae gyrB gene from human sample 3 sequenced with the PacBio Sequel II

text: Organic Material ENVO:01000155

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Bifidobacteriaceae gyrB gene from human sample 4 sequenced with the PacBio Sequel II

text: Organic Material ENVO:01000155

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Bifidobacteriaceae gyrB gene from human sample 5 sequenced with the PacBio Sequel II

text: Organic Material ENVO:01000155

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Bifidobacteriaceae gyrB gene from mouse sample 1 sequenced with the PacBio Sequel II

text: Organic Material ENVO:01000155

text: intestinal mucosa UBERON:0001242

text: USA: Pennsylvania

text: Mus musculus

text: mouse gut metagenome

text: MIMARKS Survey related sample from mouse gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Bifidobacteriaceae gyrB gene from mouse sample 2 sequenced with the PacBio Sequel II

text: Organic Material ENVO:01000155

text: intestinal mucosa UBERON:0001242

text: USA: Pennsylvania

text: Mus musculus

text: mouse gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Bifidobacteriaceae gyrB gene from mock sample sequenced with the PacBio Sequel II

text: Organic Material ENVO:01000155

text: mock community culture ENVO:01001059

text: mock community culture ENVO:01001059

text: USA

text: Mock

text: synthetic metagenome

text: MIMARKS Survey related sample from synthetic metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Lachnospiraceae gyrB gene from human sample 1 sequenced with the PacBio Sequel II

text: Organic Material ENVO:01000155

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Lachnospiraceae gyrB gene from human sample 2 sequenced with the PacBio Sequel II

text: Organic Material ENVO:01000155

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Lachnospiraceae gyrB gene from human sample 3 sequenced with the PacBio Sequel II

text: Organic Material ENVO:01000155

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Lachnospiraceae gyrB gene from human sample 4 sequenced with the PacBio Sequel II

text: Organic Material ENVO:01000155

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Lachnospiraceae gyrB gene from human sample 5 sequenced with the PacBio Sequel II

text: Organic Material ENVO:01000155

text: digestive tract environment ENVO:01001033

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Lachnospiraceae gyrB gene from mouse sample 1 sequenced with the PacBio Sequel II

text: Organic Material ENVO:01000155

text: intestinal mucosa UBERON:0001242

text: USA: Pennsylvania

text: Mus musculus

text: mouse gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Lachnospiraceae gyrB gene from mouse sample 2 sequenced with the PacBio Sequel II

text: Organic Material ENVO:01000155

text: intestinal mucosa UBERON:0001242

text: USA: Pennsylvania

text: Mus musculus

text: mouse gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Lachnospiraceae gyrB gene from mock sample sequenced with the PacBio Sequel II

text: Organic Material ENVO:01000155

text: mock community culture ENVO:01001059

text: mock community culture ENVO:01001059

text: USA

text: Mock

text: synthetic metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: 16S gene from human sample 1 sequenced with the Illumina MiSeq

text: Organic Material ENVO:01000155

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome

text: MIMARKS Survey related sample from human gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: 16S gene from human sample 2 sequenced with the Illumina MiSeq

text: Organic Material ENVO:01000155

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: 16S gene from human sample 3 sequenced with the Illumina MiSeq

text: Organic Material ENVO:01000155

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: 16S gene from human sample 4 sequenced with the Illumina MiSeq

text: Organic Material ENVO:01000155

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: 16S gene from human sample 5 sequenced with the Illumina MiSeq

text: Organic Material ENVO:01000155

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: 16S gene from mouse sample 1 sequenced with the Illumina MiSeq

text: Organic Material ENVO:01000155

text: intestinal mucosa UBERON:0001242

text: USA: Pennsylvania

text: Mus musculus

text: mouse gut metagenome

text: MIMARKS Survey related sample from mouse gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: 16S gene from mouse sample 2 sequenced with the Illumina MiSeq

text: Organic Material ENVO:01000155

text: intestinal mucosa UBERON:0001242

text: USA: Pennsylvania

text: Mus musculus

text: mouse gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: 16S gene from mock sample sequenced with the Illumina MiSeq

text: Organic Material ENVO:01000155

text: mock community culture ENVO:01001059

text: mock community culture ENVO:01001059

text: USA

text: Mock

text: synthetic metagenome

text: MIMARKS Survey related sample from synthetic metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Bacteroidaceae gyrB gene from human sample 1 sequenced with the Illumina MiSeq

text: Organic Material ENVO:01000155

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Bacteroidaceae gyrB gene from human sample 2 sequenced with the Illumina MiSeq

text: Organic Material ENVO:01000155

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Bacteroidaceae gyrB gene from human sample 3 sequenced with the Illumina MiSeq

text: Organic Material ENVO:01000155

text: digestive tract environment ENVO:01001033

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Bacteroidaceae gyrB gene from human sample 4 sequenced with the Illumina MiSeq

text: Organic Material ENVO:01000155

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Bacteroidaceae gyrB gene from human sample 5 sequenced with the Illumina MiSeq

text: Organic Material ENVO:01000155

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Bacteroidaceae gyrB gene from mouse sample 1 sequenced with the Illumina MiSeq

text: Organic Material ENVO:01000155

text: intestinal mucosa UBERON:0001242

text: USA: Pennsylvania

text: Mus musculus

text: mouse gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Bacteroidaceae gyrB gene from mouse sample 2 sequenced with the Illumina MiSeq

text: Organic Material ENVO:01000155

text: intestinal mucosa UBERON:0001242

text: USA: Pennsylvania

text: Mus musculus

text: mouse gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Bacteroidaceae gyrB gene from mock sample sequenced with the Illumina MiSeq

text: Organic Material ENVO:01000155

text: mock community culture ENVO:01001059

text: mock community culture ENVO:01001059

text: USA

text: Mock

text: synthetic metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Bifidobacteriaceae gyrB gene from human sample 1 sequenced with the Illumina MiSeq

text: Organic Material ENVO:01000155

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome

text: MIMARKS Survey related sample from human gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Bifidobacteriaceae gyrB gene from human sample 2 sequenced with the Illumina MiSeq

text: Organic Material ENVO:01000155

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Bifidobacteriaceae gyrB gene from human sample 3 sequenced with the Illumina MiSeq

text: Organic Material ENVO:01000155

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Bifidobacteriaceae gyrB gene from human sample 4 sequenced with the Illumina MiSeq

text: Organic Material ENVO:01000155

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Bifidobacteriaceae gyrB gene from human sample 5 sequenced with the Illumina MiSeq

text: Organic Material ENVO:01000155

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Bifidobacteriaceae gyrB gene from mouse sample 1 sequenced with the Illumina MiSeq

text: Organic Material ENVO:01000155

text: intestinal mucosa UBERON:0001242

text: USA: Pennsylvania

text: Mus musculus

text: mouse gut metagenome

text: MIMARKS Survey related sample from mouse gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Bifidobacteriaceae gyrB gene from mouse sample 2 sequenced with the Illumina MiSeq

text: Organic Material ENVO:01000155

text: intestinal mucosa UBERON:0001242

text: USA: Pennsylvania

text: Mus musculus

text: mouse gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Bifidobacteriaceae gyrB gene from mock sample sequenced with the Illumina MiSeq

text: Organic Material ENVO:01000155

text: mock community culture ENVO:01001059

text: mock community culture ENVO:01001059

text: USA

text: Mock

text: synthetic metagenome

text: MIMARKS Survey related sample from synthetic metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Lachnospiraceae gyrB gene from human sample 1 sequenced with the Illumina MiSeq

text: Organic Material ENVO:01000155

text: digestive tract environment ENVO:01001033

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Lachnospiraceae gyrB gene from human sample 2 sequenced with the Illumina MiSeq

text: Organic Material ENVO:01000155

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Lachnospiraceae gyrB gene from human sample 3 sequenced with the Illumina MiSeq

text: Organic Material ENVO:01000155

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Lachnospiraceae gyrB gene from human sample 4 sequenced with the Illumina MiSeq

text: Organic Material ENVO:01000155

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Lachnospiraceae gyrB gene from human sample 5 sequenced with the Illumina MiSeq

text: Organic Material ENVO:01000155

text: fecal material ENVO:00002003

text: USA

text: Homo sapiens

text: human gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Lachnospiraceae gyrB gene from mouse sample 1 sequenced with the Illumina MiSeq

text: Organic Material ENVO:01000155

text: intestinal mucosa UBERON:0001242

text: USA: Pennsylvania

text: Mus musculus

text: mouse gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Lachnospiraceae gyrB gene from mouse sample 2 sequenced with the Illumina MiSeq

text: Organic Material ENVO:01000155

text: intestinal mucosa UBERON:0001242

text: USA: Pennsylvania

text: Mus musculus

text: mouse gut metagenome


text: Pennsylvania State University

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Lachnospiraceae gyrB gene from mock sample sequenced with the Illumina MiSeq

text: Organic Material ENVO:01000155

text: mock community culture ENVO:01001059

text: mock community culture ENVO:01001059

text: USA

text: Mock

text: synthetic metagenome


text: PulseNet Next Generation Subtyping Methods Unit

text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Shigella sonnei

text: Shigella sonnei


text: live

text: Pathogen.cl

text: CDC

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Shigella flexneri

text: Shigella flexneri


text: Minnesota Department of Health Infectious Disease Laboratory Submission Group

text: live

text: SARS-CoV-2: clinical or host-associated

text: CENTRACARE LABORATORY SERVICES

text: USA: Minnesota

text: Homo sapiens

text: oropharynx

text: baseline surveillance (random sampling)

text: Minnesota Department of Health, Public Health Laboratory

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: MAPLE GROVE HOSPITAL

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: Severe acute respiratory syndrome coronavirus 2

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: WINONA HEALTH HOSPITAL

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: CENTRACARE LABORATORY SERVICES

text: USA: Minnesota

text: Homo sapiens

text: oropharynx

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: SANFORD BEMIDJI MEDICAL CENTER

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: SANFORD LABORATORIES CLINICAL INFECTIOUS DISEASE

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: MILLE LACS HEALTH SYSTEM

text: USA: Minnesota

text: Homo sapiens

text: nares


text: live

text: SARS-CoV-2: clinical or host-associated

text: FAIRVIEW RIDGES HOSPITAL

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: CARRIS HEALTH - RICE MEMORIAL HOSPITAL

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: CCM HEALTH MONTEVIDEO CLINIC

text: USA: Minnesota

text: Homo sapiens

text: nares

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: HEALTHEAST - ST JOHNS HOSPITAL

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx


text: live

text: SARS-CoV-2: clinical or host-associated

text: ALLINA HEALTH LABORATORY - ABBOTT NORTHWESTERN

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: CDC

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: PulseNet

text: Texas Department of State Health Services

text: missing

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Campylobacter jejuni

text: missing

text: Campylobacter jejuni


text: USDA Animal Plant Health Inspection Service-National Veterinary Services Laboratories - DBPL

text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: California Animal Health & Food Safety Laboratory System, Davis, CA

text: clinical isolate

text: USA: CA

text: Sus scrofa

text: Lymphocytic meningoencephalitis and bronchointerstitial pneumonia

text: brain

text: Streptococcus suis

text: NAHLN (USDA-APHIS-VS) Veterinary Pathogen Umbrella Project

text: active surveillance not initiated by an outbreak

text: animal

text: not applicable

text: One Health Enteric sample from Streptococcus suis


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: CA

text: Sus scrofa

text: Streptococcus suis septicemia

text: Lung Swab

text: Streptococcus suis

text: National Veterinary Services Laboratories

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: CA

text: Sus scrofa

text: Streptococcus suis septicemia

text: Splenic swab

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: CA

text: Sus scrofa

text: Necrotizing enterocolitis

text: Large intestinal contents

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: CA

text: Sus scrofa

text: Vasculitis, hepatitis, bronchointerstitial pneumonia; also positive for porcine cirovirus 2

text: Conjunctiva

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: CA

text: Sus scrofa

text: Interstital pneumonia

text: lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: Colorado State University Veterinary Diagnostic Laboratory, Fort Collins, CO

text: clinical isolate

text: USA: CO

text: Sus scrofa

text: Interstitial pneumonia, histiolymphocytic, diffuse, moderate with capillary fibrin thrombi.

text: lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: CO

text: Sus scrofa

text: Pneumonia

text: lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: Bronson Animal Disease Diagnostic Laboratory, Kissimmee, FL

text: clinical isolate

text: USA: FL

text: Sus scrofa

text: Necropsy

text: heart

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: Iowa State University Veterinary Diagnostic Laboratory, Ames, IA

text: clinical isolate

text: USA: IA

text: Sus scrofa

text: Meningitis

text: brain

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: IA

text: Sus scrofa

text: Meningoencephalitis

text: brain

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: IA

text: Sus scrofa

text: meningoencephalitis

text: brain

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: IA

text: Sus scrofa

text: polyserositis

text: lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: IA

text: Sus scrofa

text: bronchopneumonia

text: brain

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: IA

text: Sus scrofa

text: bronchopneumonia

text: lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: IA

text: Sus scrofa

text: meningoencephalitis

text: brain

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: IA

text: Sus scrofa

text: meningitis

text: brain

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: Veterinary Diagnostic Laboratory of University of Urbana-Champaign, Urbana, IL

text: clinical isolate

text: USA: IL

text: Sus scrofa

text: PRRSV/Bacterial septicemia

text: lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: IL

text: Sus scrofa

text: Fibrinous arthritis casued by systemic bacterial infection

text: Joint

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: IL

text: Sus scrofa

text: Unknown

text: wound

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: Purdue University Animal Disease Diagnostic Laboratory, West Lafayette, IN

text: clinical isolate

text: USA: IN

text: Sus scrofa

text: unknown

text: tracheal wash

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: IN

text: Sus scrofa

text: viral interstitial pneumonia and bacterial bronchopneumonia

text: joint swab

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: IN

text: Sus scrofa

text: septicemia

text: brain swab

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: Kansas State University Veterinary Diagnostic Laboratory, Manhattan, KS

text: clinical isolate

text: USA: KS

text: Sus scrofa

text: Septicemia

text: BRAIN SWAB

text: Streptococcus suis

text: animal

text: not applicable


text: USDA Animal Plant Health Inspection Service-National Veterinary Services Laboratories - DBPL

text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: KS

text: Sus scrofa

text: Septicemia

text: liver

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: KS

text: Sus scrofa

text: Pneumonia

text: PLEURAL SWAB

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: KS

text: Sus scrofa

text: PNEUMONIA

text: lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: KS

text: Sus scrofa

text: SEPTICEMIA

text: brain

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: University of Kentucky Veterinary Diagnostic Laboratory, Lexington, KY

text: clinical isolate

text: USA: KY

text: Sus scrofa

text: Pneumonia

text: lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: Louisiana State University Animal Disease Diagnostic Laboratory, Baton Rouge, LA

text: clinical isolate

text: USA: LA

text: Sus scrofa

text: Bronchopneumonia

text: lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: University of Minnesota Veterinary Diagnostic Laboratory, St. Paul, MN

text: clinical isolate

text: USA: MN

text: Sus scrofa

text: peritonitis

text: Peritoneal

text: Streptococcus suis

text: NAHLN (USDA-APHIS-VS) Veterinary Pathogen Umbrella Project

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: MN

text: Sus scrofa

text: septicemia

text: pleura

text: Streptococcus suis

text: active surveillance not initiated by an outbreak

text: animal

text: not applicable

text: One Health Enteric sample from Streptococcus suis


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: MN

text: Sus scrofa

text: Synovitis

text: Joint

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: MN

text: Sus scrofa

text: bronchopneumonia

text: brain

text: Streptococcus suis

text: National Veterinary Services Laboratories

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: MN

text: Sus scrofa

text: Bacterial septicemia

text: brain

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: MN

text: Sus scrofa

text: bronchopneumonia

text: pleura

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: MN

text: Sus scrofa

text: septicemia

text: brain

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: MN

text: Sus scrofa

text: bronchopneumonia

text: pleura

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: MN

text: Sus scrofa

text: meningitis

text: brain

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: MN

text: Sus scrofa

text: meningitis

text: brain

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: MN

text: Sus scrofa

text: septicemia

text: Meninges

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: MN

text: Sus scrofa

text: epicarditis

text: pericardial

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: MN

text: Sus scrofa

text: bronchopneumonia

text: liver

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: University of Missouri Veterinary Medical Diagnostic Laboratory, Columbia, MO

text: clinical isolate

text: USA: MO

text: Sus scrofa

text: Meningoencephalomyelitis

text: brain

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: MO

text: Sus scrofa

text: pericarditis

text: lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: North Carolina Veterinary Diagnostic Laboratory System, Rollins Animal Disease Diagnostic Laboratory, Raleigh, NC

text: clinical isolate

text: USA: NC

text: Sus scrofa

text: Polyserositis

text: Abdominal swab

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: NC

text: Sus scrofa

text: Pneumonia

text: lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: North Dakota State University Veterinary Diagnostic Laboratory, Fargo, ND

text: clinical isolate

text: USA: ND

text: Sus scrofa

text: EPICARDITIS

text: Pig/Heart

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: ND

text: Sus scrofa

text: Pneumonia

text: lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: University of Nebraska Veterinary Diagnostic Center, Lincoln, NE

text: clinical isolate

text: USA: NE

text: Sus scrofa

text: Pneumoniae

text: lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: NE

text: Sus scrofa

text: Sepsis

text: spleen

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: Cornell Animal Health Diagnostic Center, Ithaca, NY

text: clinical isolate

text: USA: NY

text: Sus scrofa

text: Pneumonia

text: lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: NY

text: Sus scrofa

text: Infection

text: Stomach Contents

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: Ohio Department of Agriculture Animal Disease Diagnostic Laboratory, Reynoldsburg, OH

text: clinical isolate

text: USA: OH

text: Sus scrofa

text: Fibrinous peritonitis

text: liver

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: South Dakota State University Animal Disease Research and Diagnostics Laboratory, Brookings, SD

text: clinical isolate

text: USA: SD

text: Sus scrofa

text: meningitis

text: brain 2

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: SD

text: Sus scrofa

text: pneumonia

text: lung 2

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: SD

text: Sus scrofa

text: pneumonia

text: lung 1

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: SD

text: Sus scrofa

text: endocarditis, encephalitis, septicemia

text: Brainstem

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: SD

text: Sus scrofa

text: septicemia, pneumonia

text: joint fluid

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: SD

text: Sus scrofa

text: synovitis/arthritis

text: joint fluid

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: SD

text: Sus scrofa

text: meningitis

text: brainstem

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: SD

text: Sus scrofa

text: pleuropneumonia

text: lung surface

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: SD

text: Sus scrofa

text: meningitis

text: brain

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: SD

text: Sus scrofa

text: pneumonia

text: heart valve

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: SD

text: Sus scrofa

text: pneumonia

text: lymph node

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: SD

text: Sus scrofa

text: pneumonia, septicemia

text: lung

text: Streptococcus suis

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: Texas A&M University Veterinary Medical Diagnostic Laboratory, College Station, TX

text: clinical isolate

text: USA: TX

text: Sus scrofa

text: URI

text: nasal

text: Streptococcus suis

text: animal

text: not applicable


text: Minnesota Department of Health Infectious Disease Laboratory Submission Group

text: live

text: SARS-CoV-2: clinical or host-associated

text: CENTRACARE - MONTICELLO HOSPITAL

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: Minnesota Department of Health, Public Health Laboratory

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: CENTRACARE - MONTICELLO HOSPITAL

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: Severe acute respiratory syndrome coronavirus 2

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: CENTRACARE - MONTICELLO HOSPITAL

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx


text: live

text: SARS-CoV-2: clinical or host-associated

text: ALLINA HEALTH LABORATORY - ABBOTT NORTHWESTERN

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx


text: live

text: SARS-CoV-2: clinical or host-associated

text: RIDGEVIEW MEDICAL CENTER

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: MAPLE GROVE HOSPITAL

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: UNIVERSITY OF MINNESOTA - INFECTIOUS DISEASE DIAGNOSTIC LABO

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Minnesota

text: Homo sapiens

text: nares

text: baseline surveillance (random sampling)


text: Emory University School of Medicine

text: live

text: SARS-CoV-2: clinical or host-associated

text: Colleen Kraft

text: USA: Georgia

text: Homo sapiens

text: pneumonia

text: nasopharyngeal swab


text: University of Virginia

text: live

text: Microbe, viral or environmental

text: Warthan, Michelle

text: Thailand

text: Homo sapiens

text: Lab culture

text: Thailand

text: Plasmodium falciparum 3D7

text: replicate 1

characteristic: replicate

text: cell culture

text: M1 (selected from Dd2 by DSM1)

text: Microbe sample from Plasmodium falciparum 3D7


text: University of Virginia

text: live

text: Microbe, viral or environmental

text: Warthan, Michelle

text: Thailand

text: Homo sapiens

text: Lab culture

text: Thailand

text: Plasmodium falciparum 3D7

characteristic: organism

text: replicate 2

text: cell culture

text: M1 (selected from Dd2 by DSM1)


text: PulseNet Next Generation Subtyping Methods Unit

text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

characteristic: host

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: Salmonella enterica


text: Virginia Division of Consolidated Laboratory Services Sequencing Submission Group

text: live

text: Pathogen.cl

text: USA

text: Homo sapiens

text: not provided

characteristic: isolate

text: urine

text: not provided

text: Pseudomonas aeruginosa

text: Pathogen: clinical or host-associated sample from Pseudomonas aeruginosa


text: live

text: Pathogen.cl

text: USA

text: Homo sapiens

text: not provided

text: wound

text: not provided

text: Acinetobacter baumannii

text: Pathogen: clinical or host-associated sample from Acinetobacter baumannii


text: South Carolina Dept. of Health & Environmental Control

text: live

text: Pathogen.env

text: SC

text: USA:SC

text: wastewater

text: missing

text: Escherichia coli

text: GenomeTrakr; LFFM YR4

text: South Carolina Department of Health and Environmental Control

text: environmental

text: GenomeTrakr_Bacterial isolate from wastewater


text: live

text: Pathogen.env

text: SC

text: USA:SC

text: wastewater

text: missing

text: Listeria monocytogenes

text: GenomeTrakr; LFFM YR4

text: environmental


text: Mississippi Public Health Laboratory

text: live

text: Microbe, viral or environmental

text: USA

text: sputum

text: Acinetobacter baumannii

text: Microbe sample from Acinetobacter baumannii


text: Mississippi Public Health Laboratory

text: live

text: Microbe, viral or environmental

text: USA

text: unknown

text: Acinetobacter baumannii


text: Mississippi Public Health Laboratory

text: live

text: Microbe, viral or environmental

text: USA

text: wound

text: Acinetobacter baumannii


text: Mississippi Public Health Laboratory

text: live

text: Microbe, viral or environmental

text: USA

text: leg

text: Acinetobacter baumannii


text: Mississippi Public Health Laboratory

text: live

text: Microbe, viral or environmental

text: USA

text: trachea

text: Pseudomonas aeruginosa

text: Microbe sample from Pseudomonas aeruginosa


text: Mississippi Public Health Laboratory

text: live

text: Microbe, viral or environmental

text: USA

text: sputum

text: Pseudomonas aeruginosa


text: Mississippi Public Health Laboratory

text: live

text: Microbe, viral or environmental

text: USA

text: wound

text: Enterobacter cloacae

text: Microbe sample from Enterobacter cloacae