text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Green manure treated soil 5 at 1.5% concentration


status: PUBLIC

characteristic: External Id

text: Kyungpook National University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

tag: attribute

text: South Korea: Deagu

characteristic: host

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

characteristic: organism

text: Green manure treated soil 6 at 1.5% concentration

characteristic: sample treatment

characteristic: title


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Green manure treated soil 1 at 1.0% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Green manure treated soil 2 at 1.0% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Green manure treated soil 3 at 1.0% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Green manure treated soil 4 at 1.0% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Green manure treated soil 5 at 1.0% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Green manure treated soil 6 at 1.0% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Green manure treated soil 1 at 0.5% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Green manure treated soil 2 at 0.5% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Green manure treated soil 3 at 0.5% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Green manure treated soil 4 at 0.5% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Green manure treated soil 5 at 0.5% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Autoclaved soil 1

text: Autoclaved soil 1


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Autoclaved soil 2

text: Autoclaved soil 2


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Autoclaved soil 3

text: Autoclaved soil 3


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Autoclaved soil 4

text: Autoclaved soil 4


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Autoclaved soil 5

text: Autoclaved soil 5


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Autoclaved soil 6

text: Autoclaved soil 6


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Non-treated soil 1

text: Non-treated soil 1


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Non-treated soil 2

text: Non-treated soil 2


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Non-treated soil 3

text: Non-treated soil 3


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Non-treated soil 4

text: Non-treated soil 4


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Non-treated soil 5

text: Non-treated soil 5


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Non-treated soil 6

text: Non-treated soil 6


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Biofumgated rhizosphere soil 1 at 1.5% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Biofumgated rhizosphere soil 2 at 1.5% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Biofumgated rhizosphere soil 3 at 1.5% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Biofumgated rhizosphere soil 4 at 1.5% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Biofumgated rhizosphere soil 5 at 1.5% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Biofumgated rhizosphere soil 6 at 1.5% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Biofumgated rhizosphere soil 1 at 1.0% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Biofumgated rhizosphere soil 2 at 1.0% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Biofumgated rhizosphere soil 3 at 1.0% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Biofumgated rhizosphere soil 4 at 1.0% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Biofumgated rhizosphere soil 5 at 1.0% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Biofumgated rhizosphere soil 6 at 1.0% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Biofumgated rhizosphere soil 1 at 0.5% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Biofumgated rhizosphere soil 2 at 0.5% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Biofumgated rhizosphere soil 3 at 0.5% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Biofumgated rhizosphere soil 4 at 0.5% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Biofumgated rhizosphere soil 5 at 0.5% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Biofumgated rhizosphere soil 6 at 0.5% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Green manure treated rhizosphere soil 1 at 1.5% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Green manure treated rhizosphere soil 2 at 1.5% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Green manure treated rhizosphere soil 3 at 1.5% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Green manure treated rhizosphere soil 4 at 1.5% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Green manure treated rhizosphere soil 5 at 1.5% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Green manure treated rhizosphere soil 6 at 1.5% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Green manure treated rhizosphere soil 1 at 1.0% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Green manure treated rhizosphere soil 2 at 1.0% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Green manure treated rhizosphere soil 3 at 1.0% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Green manure treated rhizosphere soil 4 at 1.0% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Green manure treated rhizosphere soil 5 at 1.0% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Green manure treated rhizosphere soil 6 at 1.0% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Green manure treated rhizosphere soil 1 at 0.5% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Green manure treated rhizosphere soil 2 at 0.5% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Green manure treated rhizosphere soil 3 at 0.5% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Green manure treated rhizosphere soil 4 at 0.5% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Green manure treated rhizosphere soil 5 at 0.5% concentration


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Autoclaved rhizosphere soil 1

text: Autoclaved rhizosphere soil 1


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Autoclaved rhizosphere soil 2

text: Autoclaved rhizosphere soil 2


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Autoclaved rhizosphere soil 3

text: Autoclaved rhizosphere soil 3


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Autoclaved rhizosphere soil 4

text: Autoclaved rhizosphere soil 4


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Autoclaved rhizosphere soil 5

text: Autoclaved rhizosphere soil 5


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Autoclaved rhizosphere soil 6

text: Autoclaved rhizosphere soil 6


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Non-treated rhizosphere soil 1

text: Non-treated rhizosphere soil 1


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Non-treated rhizosphere soil 2

text: Non-treated rhizosphere soil 2


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Non-treated rhizosphere soil 3

text: Non-treated rhizosphere soil 3


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Non-treated rhizosphere soil 4

text: Non-treated rhizosphere soil 4


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Non-treated rhizosphere soil 5

text: Non-treated rhizosphere soil 5


text: Kyungpook National University

text: live

text: Metagenome or environmental

text: South Korea: Deagu

text: soil

text: 35.8913 N 128.6095 E

text: soil metagenome

text: Non-treated rhizosphere soil 6

text: Non-treated rhizosphere soil 6


text: PulseNet Next Generation Subtyping Methods Unit

text: live

text: Pathogen.cl

text: CDC

text: missing

text: USA

text: missing

text: missing

text: missing

characteristic: isolate

text: missing

text: missing

text: missing

text: Escherichia coli

text: missing

characteristic: serovar

characteristic: strain

text: Escherichia coli


text: Trinity College Dublin

text: live

text: Pathogen.cl

text: Dublin Dental University Hospital

text: not applicable

text: Ireland: Dublin

text: Homo sapiens

text: carcinoma in situ

text: Ventral Tongue

text: 53.35 N 6.26 W

text: Fusobacterium polymorphum

text: Pathogen: clinical or host-associated sample from Fusobacterium polymorphum


text: Trinity College Dublin

text: live

text: Pathogen.cl

text: Dublin Dental University Hospital

text: not applicable

text: Ireland: Dublin

text: Homo sapiens

text: Contralateral healthy mucosa

text: Lateral Border Tongue

text: 53.35 N 6.26 W

text: Fusobacterium polymorphum


text: Trinity College Dublin

text: live

text: Pathogen.cl

text: Dublin Dental University Hospital

text: not applicable

text: Ireland: Dublin

text: Homo sapiens

text: carcinoma in situ

text: Floor of Mouth

text: 53.35 N 6.26 W

text: Fusobacterium polymorphum


text: Trinity College Dublin

text: live

text: Pathogen.cl

text: Dublin Dental University Hospital

text: not applicable

text: Ireland: Dublin

text: Homo sapiens

text: Contralateral healthy mucosa

text: buccal mucosa

text: 53.35 N 6.26 W

text: Fusobacterium polymorphum


text: Trinity College Dublin

text: live

text: Pathogen.cl

text: Dublin Dental University Hospital

text: not applicable

text: Ireland: Dublin

text: Homo sapiens

text: Oral leukoplakia (Mild Dysplasia)

text: Buccal Gingiva

text: 53.35 N 6.26 W

text: Fusobacterium polymorphum


text: Trinity College Dublin

text: live

text: Pathogen.cl

text: Dublin Dental University Hospital

text: not applicable

text: Ireland: Dublin

text: Homo sapiens

text: Oral leukoplakia (Mild Dysplasia)

text: Floor of Mouth

text: 53.35 N 6.26 W

text: Fusobacterium polymorphum


text: Trinity College Dublin

text: live

text: Pathogen.cl

text: Dublin Dental University Hospital

text: not applicable

text: Ireland: Dublin

text: Homo sapiens

text: Contralateral healthy mucosa

text: Floor of Mouth

text: 53.35 N 6.26 W

text: Fusobacterium polymorphum


text: Trinity College Dublin

text: live

text: Pathogen.cl

text: Dublin Dental University Hospital

text: not applicable

text: Ireland: Dublin

text: Homo sapiens

text: Oral leukoplakia (Mild Dysplasia)

text: Ventral Tongue

text: 53.35 N 6.26 W

text: Fusobacterium polymorphum


text: Trinity College Dublin

text: live

text: Pathogen.cl

text: Dublin Dental University Hospital

text: not applicable

text: Ireland: Dublin

text: Homo sapiens

text: carcinoma in situ

text: buccal mucosa

text: 53.35 N 6.26 W

text: Fusobacterium polymorphum


text: Trinity College Dublin

text: live

text: Pathogen.cl

text: Dublin Dental University Hospital

text: not applicable

text: Ireland: Dublin

text: Homo sapiens

text: Contralateral healthy mucosa

text: Commissure

text: 53.35 N 6.26 W

text: Fusobacterium polymorphum


text: Trinity College Dublin

text: live

text: Pathogen.cl

text: Dublin Dental University Hospital

text: not applicable

text: Ireland: Dublin

text: Homo sapiens

text: Oral leukoplakia (Moderate dysplasia)

text: Floor of Mouth

text: 53.35 N 6.26 W

text: Fusobacterium polymorphum


text: Trinity College Dublin

text: live

text: Pathogen.cl

text: Dublin Dental University Hospital

text: not applicable

text: Ireland: Dublin

text: Homo sapiens

text: Contralateral healthy mucosa

text: Post Alveolus

text: 53.35 N 6.26 W

text: Fusobacterium polymorphum


text: Trinity College Dublin

text: live

text: Pathogen.cl

text: Dublin Dental University Hospital

text: not applicable

text: Ireland: Dublin

text: Homo sapiens

text: Oral leukoplakia (Mild Dysplasia)

text: Post Alveolus

text: 53.35 N 6.26 W

text: Fusobacterium polymorphum


text: Trinity College Dublin

text: live

text: Pathogen.cl

text: Dublin Dental University Hospital

text: not applicable

text: Ireland: Dublin

text: Homo sapiens

text: Contralateral healthy mucosa

text: Soft Palate

text: 53.35 N 6.26 W

text: Fusobacterium polymorphum


text: Trinity College Dublin

text: live

text: Pathogen.cl

text: Dublin Dental University Hospital

text: not applicable

text: Ireland: Dublin

text: Homo sapiens

text: Oral leukoplakia (Mild Dysplasia)

text: Buccal Sulcus

text: 53.35 N 6.26 W

text: Fusobacterium polymorphum


text: Trinity College Dublin

text: live

text: Pathogen.cl

text: Dublin Dental University Hospital

text: not applicable

text: Ireland: Dublin

text: Homo sapiens

text: Oral leukoplakia (Moderate dysplasia)

text: Alveolus

text: 53.35 N 6.26 W

text: Fusobacterium polymorphum


text: Trinity College Dublin

text: live

text: Pathogen.cl

text: Dublin Dental University Hospital

text: not applicable

text: Ireland: Dublin

text: Homo sapiens

text: Lesion

text: Lateral Border Tongue

text: 53.35 N 6.26 W

text: Fusobacterium polymorphum


text: Trinity College Dublin

text: live

text: Pathogen.cl

text: Dublin Dental University Hospital

text: not applicable

text: Ireland: Dublin

text: Homo sapiens

text: OSCC

text: Lateral Border Tongue

text: 53.35 N 6.26 W

text: Fusobacterium polymorphum


text: Trinity College Dublin

text: live

text: Pathogen.cl

text: Dublin Dental University Hospital

text: not applicable

text: Ireland: Dublin

text: Homo sapiens

text: Contralateral healthy mucosa

text: Lateral Border Tongue

text: 53.35 N 6.26 W

text: Fusobacterium polymorphum


text: Trinity College Dublin

text: live

text: Pathogen.cl

text: Dublin Dental University Hospital

text: not applicable

text: Ireland: Dublin

text: Homo sapiens

text: Healthy patient

text: Lateral Border Tongue

text: 53.35 N 6.26 W

text: Fusobacterium polymorphum


text: Trinity College Dublin

text: live

text: Pathogen.cl

text: Dublin Dental University Hospital

text: not applicable

text: Ireland: Dublin

text: Homo sapiens

text: Healthy patient

text: Plaque

text: 53.35 N 6.26 W

text: Fusobacterium polymorphum


text: Trinity College Dublin

text: live

text: Pathogen.cl

text: Dublin Dental University Hospital

text: not applicable

text: Ireland: Dublin

text: Homo sapiens

text: Healthy patient

text: buccal mucosa

text: 53.35 N 6.26 W

text: Fusobacterium polymorphum


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Escherichia coli

text: missing

text: Escherichia coli


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Victoria Hospital wc VHW

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-0575/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-0575/2020

text: missing

text: Severe acute respiratory syndrome coronavirus 2

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service

text: Genomic Surveillance of SARS-CoV-2 in South Africa


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Alma CDC wc AHC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-0712/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-0712/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mitchells Plain Hospital wc MPH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-0971/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-0971/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-0978/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-0978/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: 2 Military Hospital wc MAA

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-0983/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-0983/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: 2 Military Hospital wc MAA

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-0985/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-0985/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: False Bay Hospital wc FBH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-1004/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-1004/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: False Bay Hospital wc FBH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-1008/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-1008/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Victoria Hospital wc VHW

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-1093/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-1093/2020

text: missing

text: Severe acute respiratory syndrome coronavirus 2


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Victoria Hospital wc VHW

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-1095/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-1095/2020

text: missing

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service

text: Genomic Surveillance of SARS-CoV-2 in South Africa


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: 2 Military Hospital wc MAA

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-1105/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-1105/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: False Bay Hospital wc FBH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-1114/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-1114/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: 2 Military Hospital wc MAA

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-1116/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-1116/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-1118/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-1118/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Heideveld Emergency Centre

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-1813/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-1813/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Heideveld Emergency Centre

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-1881/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-1881/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Guguletu CHC wc GDH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-2024/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-2024/2020

text: missing

text: Severe acute respiratory syndrome coronavirus 2


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Heideveld Emergency Centre

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-3490/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-3490/2020

text: missing

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Hanover Park CHC wc HPH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-3524/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-3524/2020

text: missing

text: Genomic Surveillance of SARS-CoV-2 in South Africa


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Hanover Park CHC wc HPH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-7098/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-7098/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Hanover Park CHC wc HPH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-7099/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-7099/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-7114/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-7114/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-7122/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-7122/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Guguletu CHC wc GDH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-7183/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-7183/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mitchells Plain Hospital wc MPH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-7189/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-7189/2020

text: missing

text: Severe acute respiratory syndrome coronavirus 2


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: False Bay Hospital wc FBH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-7191/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-7191/2020

text: missing

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Guguletu CHC wc GDH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-7220/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-7220/2020

text: missing

text: Genomic Surveillance of SARS-CoV-2 in South Africa


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Red Cross Children's Hospital wc RXH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-7287/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-7287/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mitchells Plain Hospital wc MPH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-7352/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-7352/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mitchells Plain Hospital wc MPH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-7353/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-7353/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-7442/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-7442/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Heideveld Emergency Centre

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-7748/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-7748/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-7794/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-7794/2020

text: missing

text: Severe acute respiratory syndrome coronavirus 2


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-7846/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-7846/2020

text: missing

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-7992/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-7992/2020

text: missing

text: Genomic Surveillance of SARS-CoV-2 in South Africa


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-8004/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-8004/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Guguletu CHC wc GDH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-8182/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-8182/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Guguletu CHC wc GDH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-8183/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-8183/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Hanover Park CHC wc HPH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-8187/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-8187/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mowbray Maternity Hospital wc MMH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-8195/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-8195/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: 2 Military Hospital wc MAA

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-8265/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-8265/2020

text: missing

text: Severe acute respiratory syndrome coronavirus 2


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-8358/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-8358/2020

text: missing

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-8365/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-8365/2020

text: missing

text: Genomic Surveillance of SARS-CoV-2 in South Africa


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-8370/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-8370/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-8394/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-8394/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-8491/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-8491/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-8542/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-8542/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: False Bay Hospital wc FBH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-8603/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-8603/2020

text: missing


SSB01 mutant lbr1

text: University of California, Riverside

text: live

text: Model organism or animal

characteristic: age

characteristic: breed

characteristic: cultivar

characteristic: ecotype

text: Breviolum minutum

characteristic: sex

characteristic: tissue

text: Breviolum minutum SSB01 mutant lbr1


characteristic: External Id

text: PulseNet Next Generation Subtyping Methods Unit

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Thompson

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: missing

text: USA

text: missing

characteristic: host

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

characteristic: organism

text: missing

text: missing

text: enteritidis

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: USA

text: missing

text: missing

text: missing

characteristic: isolate

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Paratyphi B var. L(+) tartrate+

characteristic: serovar

text: human

characteristic: strain

text: Salmonella enterica

characteristic: title


text: live

text: Pathogen.cl

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Paratyphi A

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Needs further review

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: I 4:i:-

text: human

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Infantis

text: human

text: Salmonella enterica


text: CDC

text: live

text: Pathogen.cl

text: not applicable

text: Peru

text: Homo sapiens

text: not applicable

text: Invasive

text: not applicable

text: Streptococcus pneumoniae

text: Pathogen: clinical or host-associated sample from Streptococcus pneumoniae


text: CDC

text: live

text: Pathogen.cl

text: not applicable

text: Peru

text: Homo sapiens

text: not applicable

text: Carriage

text: not applicable

text: Streptococcus pneumoniae


text: Surgery, Weill Cornell Medicine

text: live

text: Generic

text: all pancreas-derived cells

characteristic: cell type

text: missing

text: WT

characteristic: genotype

text: missing

text: Mus musculus

text: Pancreas

text: 2 days recovery

characteristic: time point

text: Pancreas

text: mtC_b0603_2DRec [scRNA-seq]

text: Pancreatitis

characteristic: treatment


characteristic: External Id

text: Surgery, Weill Cornell Medicine

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: all pancreas-derived cells

text: missing

text: WT

text: missing

text: Mus musculus

text: Pancreas

text: 2 days recovery

text: Pancreas

characteristic: tissue

text: mtS_b0602_2DRec [scRNA-seq]

text: Inflammation-naïve


text: Surgery, Weill Cornell Medicine

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: all pancreas-derived cells

text: missing

text: WT

text: missing

text: Mus musculus

text: Pancreas

text: 2 days recovery

text: Pancreas

text: mtS_b0600_2DRec [scRNA-seq]

text: Inflammation-naïve


text: Surgery, Weill Cornell Medicine

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: all pancreas-derived cells

text: missing

text: WT

text: missing

text: Mus musculus

characteristic: organism

text: Pancreas

text: 2 days recovery

text: Pancreas

text: mtC_b0599_2DRec [scRNA-seq]

text: Pancreatitis


text: Surgery, Weill Cornell Medicine

text: live

text: Generic

text: all pancreas-derived cells

text: missing

text: WT

text: missing

text: Mus musculus

text: Pancreas

text: 12 weeks recovery

text: Pancreas

text: mtC_2547_12WRec [scRNA-seq]

text: Pancreatitis


text: Surgery, Weill Cornell Medicine

text: live

text: Generic

text: all pancreas-derived cells

text: missing

text: WT

text: missing

text: Mus musculus

text: Pancreas

text: 12 weeks recovery

text: Pancreas

text: mtS_2546_12WRec [scRNA-seq]

text: Inflammation-naïve


text: Surgery, Weill Cornell Medicine

text: live

text: Generic

text: all pancreas-derived cells

text: missing

text: missing

text: Mus musculus

text: Pancreas

text: 12 weeks recovery, 2days Ras

text: Pancreas

text: mktS_2544_12WRec_2DRas [scRNA-seq]

text: Inflammation-naïve


text: Surgery, Weill Cornell Medicine

text: live

text: Generic

text: all pancreas-derived cells

text: missing

text: missing

text: Mus musculus

text: Pancreas

text: 12 weeks recovery, 2days Ras

text: Pancreas

text: mktC_2524_12WRec_2DRas [scRNA-seq]

text: Pancreatitis


text: CT State Public Health Laboratory Submission Group

text: live

characteristic: MLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

characteristic: host

characteristic: isolate

text: sputum

text: Acinetobacter baumannii

text: whole organism

text: Microbe sample from Acinetobacter baumannii


text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: urine

text: Escherichia coli

text: whole organism

text: Microbe sample from Escherichia coli

characteristic: title


text: live

text: Pathogen.cl

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: muenchen

characteristic: serovar

text: human

characteristic: strain

text: Salmonella enterica


characteristic: External Id

text: live

text: Pathogen.cl

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: missing

text: Thompson

text: human

text: Salmonella enterica


characteristic: INSDC center name

text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: Escherichia coli

text: Escherichia coli


characteristic: INSDC first public

text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Shigella sonnei

text: Shigella sonnei


text: Surgery, Weill Cornell Medicine

text: live

text: Generic

text: Acinar

characteristic: cell type

text: missing

text: Wildtype

characteristic: genotype

text: missing

text: Mus musculus

text: Pancreas

text: 12 weeks recovery

characteristic: time point

text: Pancreas

characteristic: tissue

text: Caerulein

characteristic: treatment


text: Surgery, Weill Cornell Medicine

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Acinar

text: missing

text: Wildtype

text: missing

text: Mus musculus

text: Pancreas

text: 12 weeks recovery

text: Pancreas

text: Saline


text: Surgery, Weill Cornell Medicine

text: live

text: Generic

characteristic: SRA accession

text: Acinar

text: missing

text: Wildtype

text: missing

text: Mus musculus

characteristic: organism

text: Pancreas

text: 2 days recovery

text: Pancreas

text: Caerulein


text: Surgery, Weill Cornell Medicine

text: live

text: Generic

text: Acinar

text: missing

text: Wildtype

text: missing

text: Mus musculus

text: Pancreas

text: 2 days recovery

text: Pancreas

characteristic: title

text: Saline


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

characteristic: host

text: Rhizosphere Iza_bac_Control_a

text: 22.716 S 47.613 W

text: rhizosphere metagenome


characteristic: External Id

text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_bac_Control_b

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

characteristic: INSDC center name

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_bac_Control_c

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

characteristic: INSDC first public

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_bac_Control_d

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_bac_T2_a

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_bac_T2_b

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_bac_T2_c

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_bac_T2_d

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_bac_T1_a

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_bac_T1_b

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_bac_T1_c

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_bac_T1_d

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_bac_T3_a

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_bac_T3_b

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_bac_T3_c

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_bac_T3_d

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_bac_T4_a

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_bac_T4_b

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_bac_T4_c

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_bac_T4_d

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_bac_SynCom_a

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_bac_SynCom_b

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_bac_SynCom_c

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_bac_SynCom_d

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Soil

text: Soil Iza_bac_Bulk_a

text: 22.716 S 47.613 W

text: soil metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Soil

text: Soil Iza_bac_Bulk_b

text: 22.716 S 47.613 W

text: soil metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Soil

text: Soil Iza_bac_Bulk_c

text: 22.716 S 47.613 W

text: soil metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Soil

text: Soil Iza_bac_Bulk_d

text: 22.716 S 47.613 W

text: soil metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_fung_Control_a

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_fung_Control_b

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_fung_Control_c

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_fung_Control_d

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_fung_T2_a

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_fung_T2_b

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_fung_T2_c

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_fung_T2_d

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_fung_T1_a

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_fung_T1_b

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_fung_T1_c

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_fung_T1_d

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_fung_T3_a

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_fung_T3_b

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_fung_T3_c

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_fung_T3_d

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_fung_T4_a

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_fung_T4_b

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_fung_T4_c

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_fung_T4_d

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_fung_SynCom_a

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_fung_SynCom_b

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_fung_SynCom_c

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Rhizosphere

text: Rhizosphere Iza_fung_SynCom_d

text: 22.716 S 47.613 W

text: rhizosphere metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Soil

text: Soil Iza_fung_Bulk_a

text: 22.716 S 47.613 W

text: soil metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Soil

text: Soil Iza_fung_Bulk_b

text: 22.716 S 47.613 W

text: soil metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Soil

text: Soil Iza_fung_Bulk_c

text: 22.716 S 47.613 W

text: soil metagenome


text: University of Sao Paulo

text: live

text: Metagenome or environmental

text: Brazil: Piracicaba

text: Soil

text: Soil Iza_fung_Bulk_d

text: 22.716 S 47.613 W

text: soil metagenome


text: live

text: Pathogen.cl

text: CDC

text: missing

text: USA

text: missing

text: missing

text: missing

characteristic: isolate

text: missing

text: missing

text: missing

text: Shigella sonnei

text: missing

characteristic: serovar

characteristic: strain

text: Shigella sonnei


text: live

text: Pathogen.cl

text: CDC

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Escherichia coli

text: missing

text: Escherichia coli


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Conville CDC wc CVC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-8635/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-8635/2020

text: missing

text: Severe acute respiratory syndrome coronavirus 2

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Vanguard CHC wc VGC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-8685/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-8685/2020

text: missing

text: Genomic Surveillance of SARS-CoV-2 in South Africa


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Guguletu CHC wc GDH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-8705/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-8705/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Red Cross Children's Hospital wc RXH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-8738/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-8738/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mitchells Plain Hospital wc MPH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-8846/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-8846/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Guguletu CHC wc GDH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-8847/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-8847/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-8908/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-8908/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-8910/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-8910/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-8954/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-8954/2020

text: missing

text: Severe acute respiratory syndrome coronavirus 2


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-8970/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-8970/2020

text: missing

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-9025/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-9025/2020

text: missing

text: Genomic Surveillance of SARS-CoV-2 in South Africa


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-9041/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-9041/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-9117/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-9117/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-9151/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-9151/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-9160/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-9160/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-9161/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-9161/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Hanover Park CHC wc HPH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-9210/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-9210/2020

text: missing

text: Severe acute respiratory syndrome coronavirus 2


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Hanover Park CHC wc HPH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-9211/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-9211/2020

text: missing

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Guguletu CHC wc GDH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-9285/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-9285/2020

text: missing

text: Genomic Surveillance of SARS-CoV-2 in South Africa


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Guguletu CHC wc GDH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-9286/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-9286/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Guguletu CHC wc GDH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-9287/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-9287/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Guguletu CHC wc GDH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-9289/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-9289/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Guguletu CHC wc GDH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-9291/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-9291/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Heideveld Emergency Centre

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-9382/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-9382/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Heideveld Emergency Centre

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-9383/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-9383/2020

text: missing

text: Severe acute respiratory syndrome coronavirus 2


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Heideveld Emergency Centre

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-9384/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-9384/2020

text: missing

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Guguletu CHC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-9418/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-9418/2020

text: missing

text: Genomic Surveillance of SARS-CoV-2 in South Africa


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Kensington CDC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-9420/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-9420/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-9484/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-9484/2021

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Valkenberg Hospital wc VBH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-9581/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-9581/2021

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Retreat CHC wc RHC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-9617/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-9617/2021

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Victoria Hospital wc VHW

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-9730/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-9730/2021

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Alma CDC wc AHC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-9754/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-9754/2021

text: missing

text: Severe acute respiratory syndrome coronavirus 2


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Pacaltsdorp Clinic wc PAC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-9818/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-9818/2021

text: missing

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Heideveld Emergency Centre

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-9825/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-9825/2021

text: missing

text: Genomic Surveillance of SARS-CoV-2 in South Africa


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-9919/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-9919/2021

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-9966/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-9966/2021

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-9970/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-9970/2021

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-A788/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-A788/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-A789/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-A789/2020

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-A791/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-A791/2020

text: missing

text: Severe acute respiratory syndrome coronavirus 2


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-A793/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-A793/2020

text: missing

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-A799/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-A799/2020

text: missing

text: Genomic Surveillance of SARS-CoV-2 in South Africa


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Pelican Park CDC wc PAX

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-A805/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-A805/2021

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-A806/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-A806/2021

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: De Rust (Blommenek) Clinic wc DRC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-A808/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-A808/2021

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Lentegeur Hospital wc LGH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-A814/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-A814/2021

text: missing


text: University of Cape Town

text: live

text: SARS-CoV-2: clinical or host-associated

text: Klip Road Clinic wc KLI

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-A817/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-A817/2021

text: missing


text: Indiana Dept. of Health

text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: blood

text: Escherichia coli

text: Isolate

text: not applicable

text: Microbe sample from Escherichia coli


text: Indiana Dept. of Health

text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: sputum

text: Acinetobacter baumannii

text: Isolate

text: not applicable

text: Microbe sample from Acinetobacter baumannii


text: Indiana Dept. of Health

text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: wound

text: Acinetobacter baumannii

text: Isolate

text: not applicable


text: Indiana Dept. of Health

text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: urine

text: Klebsiella pneumoniae

text: Isolate

text: not applicable

text: Microbe sample from Klebsiella pneumoniae


text: Indiana Dept. of Health

text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: Sputum-tracheal

text: Acinetobacter baumannii

text: Isolate

text: not applicable


text: Indiana Dept. of Health

text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: blood

text: Acinetobacter baumannii

text: Isolate

text: not applicable


text: Indiana Dept. of Health

text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: urine

text: Acinetobacter baumannii

text: Isolate

text: not applicable


text: Indiana Dept. of Health

text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: urine

text: Providencia stuartii

text: Isolate

text: not applicable

text: Microbe sample from Providencia stuartii


text: Indiana Dept. of Health

text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: urine

text: Escherichia coli

text: Isolate

text: not applicable

text: Microbe sample from Escherichia coli


text: Indiana Dept. of Health

text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: urine

text: Pseudomonas aeruginosa

text: Isolate

text: not applicable

text: Microbe sample from Pseudomonas aeruginosa


text: Indiana Dept. of Health

text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: Sputum-tracheal

text: Proteus mirabilis

text: Isolate

text: not applicable

text: Microbe sample from Proteus mirabilis


text: Indiana Dept. of Health

text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: Trach Site

text: Klebsiella pneumoniae

text: Isolate

text: not applicable


text: Indiana Dept. of Health

text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: urine

text: Serratia marcescens

text: Isolate

text: not applicable

text: Microbe sample from Serratia marcescens


text: Indiana Dept. of Health

text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: urine

text: Providencia rettgeri

text: Isolate

text: not applicable

text: Microbe sample from Providencia rettgeri


text: Indiana Dept. of Health

text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: sputum

text: Klebsiella pneumoniae

text: Isolate

text: not applicable


text: PulseNet Next Generation Subtyping Methods Unit

text: live

text: Pathogen.cl

text: CDC

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Campylobacter coli

text: missing

text: Campylobacter coli


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Campylobacter jejuni

text: missing

text: Campylobacter jejuni


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Escherichia coli

text: missing

text: Escherichia coli


text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Campylobacter jejuni

text: missing

text: Campylobacter jejuni


text: Stottmann, Pediatrics, Nationwide Children's Hospital

text: live

text: Generic

characteristic: cell line

text: iPSC

characteristic: cell type

text: missing

text: patient

characteristic: genotype

text: missing

text: Homo sapiens

text: iPSC


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: neural rosette

text: missing

text: patient

text: missing

text: Homo sapiens

text: neural rosette

characteristic: treatment


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: iPSC

text: missing

text: control

text: missing

text: Homo sapiens

text: iPSC


text: live

text: Generic

characteristic: SRA accession

text: neural rosette

text: missing

text: control

text: missing

text: Homo sapiens

characteristic: organism

text: neural rosette

characteristic: title


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: iPSC

text: missing

text: KO

text: missing

text: Homo sapiens

text: iPSC


characteristic: INSDC first public

text: live

text: Generic

text: neural rosette

text: missing

text: KO

text: missing

text: Homo sapiens

text: neural rosette


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

characteristic: host

text: missing

text: missing

characteristic: isolate

text: missing

text: missing

text: missing

text: Shigella flexneri

text: missing

characteristic: serovar

text: Shigella flexneri


text: Universidad de Antioquia

text: live

text: Generic

characteristic: cell line

text: Monocytes

characteristic: cell type

text: missing

text: WT

text: missing

text: Homo sapiens

text: UAL


text: Universidad de Antioquia

characteristic: INSDC last update

text: live

text: Generic

text: Monocytes

text: missing

text: WT

characteristic: genotype

text: missing

text: Homo sapiens

text: OA


text: Universidad de Antioquia

characteristic: INSDC secondary accession

text: live

text: Generic

text: Monocytes

text: missing

text: WT

text: missing

text: Homo sapiens

text: UA

characteristic: treatment


text: Universidad de Antioquia

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Monocytes

text: missing

text: WT

text: missing

text: Homo sapiens


text: Universidad de Antioquia

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Monocytes

text: missing

text: WT

text: missing

text: Homo sapiens

text: OBE


text: Universidad de Antioquia

text: live

text: Generic

text: Monocytes

text: missing

text: WT

text: missing

text: Homo sapiens

characteristic: organism

characteristic: title

text: Macrophage differentiation


characteristic: External Id

text: Universidad de Antioquia

characteristic: INSDC center name

text: live

text: Generic

text: Monocytes

text: missing

text: WT

text: missing

text: Homo sapiens

text: control


text: Universidad de Antioquia

characteristic: INSDC first public

text: live

text: Generic

text: Monocytes

text: missing

text: WT

text: missing

text: Mus musculus

text: UAL


text: Universidad de Antioquia

text: live

text: Generic

text: Monocytes

text: missing

text: WT

text: missing

text: Mus musculus

text: OA


text: Universidad de Antioquia

text: live

text: Generic

text: Monocytes

text: missing

text: WT

text: missing

text: Mus musculus

text: UA


text: Universidad de Antioquia

text: live

text: Generic

text: Monocytes

text: missing

text: WT

text: missing

text: Mus musculus


text: Universidad de Antioquia

text: live

text: Generic

text: Monocytes

text: missing

text: WT

text: missing

text: Mus musculus

text: OBE


text: Universidad de Antioquia

text: live

text: Generic

text: Monocytes

text: missing

text: WT

text: missing

text: Mus musculus

text: J774_cells_CONTROL ACTIVADO3

text: Macrophage differentiation


text: Universidad de Antioquia

text: live

text: Generic

text: Monocytes

text: missing

text: WT

text: missing

text: Mus musculus

text: control


text: Universidad de Antioquia

text: live

text: Generic

text: Monocytes

text: missing

text: WT

text: missing

text: Mus musculus

text: J774_cells_CONTROL ACTIVADO2

text: Macrophage differentiation


text: Universidad de Antioquia

text: live

text: Generic

text: Monocytes

text: missing

text: WT

text: missing

text: Mus musculus

text: J774_cells_CONTROL ACTIVADO1

text: Macrophage differentiation


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

characteristic: host

text: missing

text: missing

characteristic: isolate

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

characteristic: strain

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: missing

text: USA:WI

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

characteristic: serovar

text: Salmonella enterica


text: National Reference Centre for Multidrug-resistant Gram-negative Bacteria (NRC)

characteristic: INSDC last update

text: live

text: Pathogen.cl

text: not specified

text: Germany

text: Homo sapiens

text: restricted access

text: Case 1

text: Screening (rectal)

text: missing

text: Escherichia coli

text: Pathogen: clinical or host-associated sample from Escherichia coli


text: live

text: Pathogen.cl

text: not specified

characteristic: genotype

text: Germany

text: Homo sapiens

text: restricted access

text: Case 2

text: Screening (rectal)

text: missing

text: Escherichia coli


characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

text: not specified

text: ST38 Cluster

text: Germany

text: Homo sapiens

text: restricted access

text: Case 3

text: Screening (rectal)

text: missing

text: Escherichia coli

text: ST38 Cluster


text: live

text: Pathogen.cl

text: not specified

text: ST38 Cluster

text: Germany

text: Homo sapiens

text: restricted access

text: Case 4

text: Screening (rectal)

text: missing

text: Escherichia coli

text: ST38 Cluster


text: live

text: Pathogen.cl

text: not specified

text: Germany

text: Homo sapiens

text: restricted access

text: Case 5

text: Screening (rectal)

text: missing

text: Escherichia coli


text: live

text: Pathogen.cl

text: not specified

text: ST38 Non-cluster

text: Germany

text: Homo sapiens

text: restricted access

text: Case 6

text: Screening (rectal)

text: missing

text: Escherichia coli

text: ST38 Non-cluster


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Escherichia coli

text: Escherichia coli


text: SARS-CoV-2/Human/USA/UT-CDC-2-7466012/2023

text: CDC Coronavirus and Other Respiratory Viruses Laboratory Branch

text: live

characteristic: Isolate

text: SARS-CoV-2: clinical or host-associated

text: UT-Unified State Labs: Public Health Utah DOH

text: Nasopharyngeal and Oropharyngeal Swab

text: Nasopharyngeal and Oropharyngeal Swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Utah

text: Homo sapiens

text: Unknown

text: Unknown

text: Unknown

text: Nasopharyngeal and Oropharyngeal Swab

characteristic: lineage/clade name

text: Severe acute respiratory syndrome coronavirus 2

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/UT-CDC-2-7466011/2023

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: Nasopharyngeal and Oropharyngeal Swab

text: Nasopharyngeal and Oropharyngeal Swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Utah

text: Homo sapiens

text: Unknown

text: Unknown

text: Unknown

text: Nasopharyngeal and Oropharyngeal Swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/UT-CDC-2-7465999/2023

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

characteristic: SRA accession

text: Nasopharyngeal and Oropharyngeal Swab

text: Nasopharyngeal and Oropharyngeal Swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Utah

text: Homo sapiens

text: Unknown

text: Unknown

text: Unknown

text: Nasopharyngeal and Oropharyngeal Swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/UT-CDC-2-7465991/2023

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal and Oropharyngeal Swab

text: Nasopharyngeal and Oropharyngeal Swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Utah

text: Homo sapiens

text: Unknown

text: Unknown

text: Unknown

text: Nasopharyngeal and Oropharyngeal Swab

characteristic: organism

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance

characteristic: title


characteristic: External Id

text: SARS-CoV-2/Human/USA/UT-CDC-2-7465990/2023

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal and Oropharyngeal Swab

text: Nasopharyngeal and Oropharyngeal Swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Utah

text: Homo sapiens

text: Unknown

text: Unknown

text: Unknown

text: Nasopharyngeal and Oropharyngeal Swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/UT-CDC-2-7465989/2023

characteristic: INSDC first public

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal and Oropharyngeal Swab

text: Nasopharyngeal and Oropharyngeal Swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Utah

text: Homo sapiens

characteristic: host

text: Unknown

text: Unknown

text: Unknown

text: Nasopharyngeal and Oropharyngeal Swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/UT-CDC-2-7465984/2023

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal and Oropharyngeal Swab

text: Nasopharyngeal and Oropharyngeal Swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Utah

text: Homo sapiens

text: Unknown

text: Unknown

text: Unknown

text: Nasopharyngeal and Oropharyngeal Swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/UT-CDC-2-7465982/2023

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal and Oropharyngeal Swab

text: Nasopharyngeal and Oropharyngeal Swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Utah

text: Homo sapiens

text: Unknown

text: Unknown

text: Unknown

text: Nasopharyngeal and Oropharyngeal Swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/UT-CDC-2-7465965/2023

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal and Oropharyngeal Swab

text: Nasopharyngeal and Oropharyngeal Swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Utah

text: Homo sapiens

text: Unknown

text: Unknown

text: Unknown

text: Nasopharyngeal and Oropharyngeal Swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/UT-CDC-2-7465963/2023

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal and Oropharyngeal Swab

text: Nasopharyngeal and Oropharyngeal Swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Utah

text: Homo sapiens

text: Unknown

text: Unknown

text: Unknown

text: Nasopharyngeal and Oropharyngeal Swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/UT-CDC-2-7465952/2023

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal and Oropharyngeal Swab

text: Nasopharyngeal and Oropharyngeal Swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Utah

text: Homo sapiens

text: Unknown

text: Unknown

text: Unknown

text: Nasopharyngeal and Oropharyngeal Swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/UT-CDC-2-7465851/2023

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal and Oropharyngeal Swab

text: Nasopharyngeal and Oropharyngeal Swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Utah

text: Homo sapiens

text: Unknown

text: Unknown

text: Unknown

text: Nasopharyngeal and Oropharyngeal Swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/UT-CDC-2-7465850/2023

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal and Oropharyngeal Swab

text: Nasopharyngeal and Oropharyngeal Swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Utah

text: Homo sapiens

text: Unknown

text: Unknown

text: Unknown

text: Nasopharyngeal and Oropharyngeal Swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/UT-CDC-2-7465844/2023

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal and Oropharyngeal Swab

text: Nasopharyngeal and Oropharyngeal Swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Utah

text: Homo sapiens

text: Unknown

text: Unknown

text: Unknown

text: Nasopharyngeal and Oropharyngeal Swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/UT-CDC-2-7465843/2023

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal and Oropharyngeal Swab

text: Nasopharyngeal and Oropharyngeal Swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Utah

text: Homo sapiens

text: Unknown

text: Unknown

text: Unknown

text: Nasopharyngeal and Oropharyngeal Swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/UT-CDC-2-7465831/2023

text: CDC Coronavirus and Other Respiratory Viruses Laboratory Branch

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal and Oropharyngeal Swab

text: Nasopharyngeal and Oropharyngeal Swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Utah

text: Homo sapiens

text: Unknown

text: Unknown

text: Unknown

text: Nasopharyngeal and Oropharyngeal Swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/UT-CDC-2-7465830/2023

text: live

text: SARS-CoV-2: clinical or host-associated

text: UT-Unified State Labs: Public Health Utah DOH

text: Nasopharyngeal and Oropharyngeal Swab

text: Nasopharyngeal and Oropharyngeal Swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Utah

text: Homo sapiens

text: Unknown

text: Unknown

text: Unknown

text: Nasopharyngeal and Oropharyngeal Swab

text: Severe acute respiratory syndrome coronavirus 2

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/UT-CDC-2-7465056/2023

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal and Oropharyngeal Swab

text: Nasopharyngeal and Oropharyngeal Swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Utah

text: Homo sapiens

text: Unknown

text: Unknown

text: Unknown

text: Nasopharyngeal and Oropharyngeal Swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/ND-CDC-2-7466016/2023

text: live

text: SARS-CoV-2: clinical or host-associated

text: ND Dept. of Health Laboratory Services-Microbiology

text: Nasopharyngeal and Oropharyngeal Swab

text: Nasopharyngeal and Oropharyngeal Swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: North Dakota

text: Homo sapiens

text: Unknown

text: Unknown

text: Unknown

text: Nasopharyngeal and Oropharyngeal Swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance