text: live

text: Microbe, viral or environmental

characteristic: SRA accession

text: not collected

text: not collected

characteristic: host

text: not collected

text: Monascus purpureus

characteristic: organism

text: replicate = biological replicate 2

text: Fermentation broth

text: Microbe sample from Monascus purpureus


status: PUBLIC

characteristic: External Id

text: Central South University of Forestry and Technology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

tag: attribute

text: not collected

text: not collected

text: not collected

text: Monascus purpureus

text: replicate = biological replicate 3

characteristic: replicate

text: Fermentation broth

characteristic: strain

text: Microbe sample from Monascus purpureus

characteristic: title


text: live

text: Microbe, viral or environmental

text: not collected

text: not collected

text: not collected

text: Monascus purpureus

text: replicate = biological replicate 4

text: Fermentation broth

text: Microbe sample from Monascus purpureus


text: live

text: Microbe, viral or environmental

text: not collected

text: not collected

text: not collected

text: Monascus purpureus

text: replicate = biological replicate 5

text: Fermentation broth

text: Microbe sample from Monascus purpureus


text: live

text: Microbe, viral or environmental

text: not collected

text: not collected

text: not collected

text: Monascus purpureus

text: replicate = biological replicate 6

text: Fermentation broth

text: Microbe sample from Monascus purpureus


text: The First Affiliated Hospital of Zhejiang University

text: live

text: Microbe, viral or environmental

text: China: Guangxi

text: Homo sapiens

text: Escherichia coli

text: mixed culture

text: Microbe sample from Escherichia coli


text: live

text: Microbe, viral or environmental

text: China: Guangxi

text: vegetable

text: Escherichia coli

text: mixed culture

text: Microbe sample from Escherichia coli


PX

text: Southwest University

text: live

text: Plant

characteristic: age

text: Goushu

characteristic: cultivar

text: sprouting

text: leaf curling and mosaic

characteristic: disease

text: severe

text: Chongqing

characteristic: ecotype

text: China: Chongqing

text: 80 cm

text: BP-X

characteristic: isolate

text: Broussonetia papyrifera

text: leaf

characteristic: tissue

text: RNA-seq of paper mulberry


WT exp RNA Replicate 1

characteristic: External Id

text: Ningbo University

text: live

text: MIMARKS.specimen

text: MIGS/MIMS/MIMARKS.plant-associated

characteristic: SRA accession

text: Keywords: GSC:MIxS;MIMARKS:6.0

characteristic: description

characteristic: host

text: Phaeodactylum tricornutum

characteristic: organism

text: CCAP 1055/1

text: WT exp RNA Replicate 1 from Phaeodactylum tricornutum


GFP rat F6 #201 (Male)

text: Seoul National University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Model organism or animal

text: 8 week

text: Goo Jang

text: not applicable

characteristic: breed

text: Beomjin Jeon

text: not applicable

text: not applicable

text: not applicable

text: South Korea: Seoul

text: not applicable

text: Rattus norvegicus

text: male

characteristic: sex

text: Sprague-Dawley

text: tail

text: Model organism or animal sample from Rattus norvegicus


GFP rat F6 #204 (Female)

text: Seoul National University

text: live

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 8 week

characteristic: age

text: Goo Jang

text: not applicable

text: Beomjin Jeon

text: not applicable

characteristic: cultivar

text: not applicable

text: not applicable

text: South Korea: Seoul

text: not applicable

text: Rattus norvegicus

text: female

text: Sprague-Dawley

characteristic: strain

text: tail

characteristic: title


characteristic: External Id

text: Chung-Ang University

text: live

text: Pathogen.cl

characteristic: SRA accession

text: Department of Diseases Research, Incheon Metropolitan City Institute of Public Health and Environment

text: South Korea

text: Homo sapiens

text: Acute gastroenteritis

text: Norovirus GII.2[P16]

characteristic: isolate

text: stool

text: missing

text: Norovirus GII

text: Pathogen: clinical or host-associated sample from Norovirus GII


text: Chung-Ang University

text: live

text: Pathogen.cl

text: South Korea

text: Homo sapiens

characteristic: host

text: Acute gastroenteritis

text: Norovirus GII.3[P12]

text: stool

text: missing

text: Norovirus GII

characteristic: organism


text: Chung-Ang University

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.cl

text: South Korea

text: Homo sapiens

text: Acute gastroenteritis

text: Norovirus GII.6[P7]

text: stool

text: missing

text: Norovirus GII


text: Chung-Ang University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

text: South Korea

text: Homo sapiens

text: Acute gastroenteritis

text: Norovirus GII.17[P17]

text: stool

text: missing

text: Norovirus GII


text: Chung-Ang University

text: live

characteristic: INSDC status

text: Pathogen.cl

text: South Korea

text: Homo sapiens

text: Acute gastroenteritis

text: Norovirus GII.4[P31]

text: stool

text: missing

text: Norovirus GII


text: Chung-Ang University

text: live

text: Pathogen.cl

text: South Korea

text: Homo sapiens

text: Acute gastroenteritis

text: Norovirus GII.4[P16]

text: stool

text: missing

text: Norovirus GII


text: Chung-Ang University

text: live

text: Pathogen.cl

text: South Korea

text: Homo sapiens

text: Acute gastroenteritis

text: Norovirus GII.4[P16]

text: stool

text: missing

text: Norovirus GII


text: Chung-Ang University

text: live

text: Pathogen.cl

text: South Korea

text: Homo sapiens

text: Acute gastroenteritis

text: Norovirus GII.4[P31]

text: stool

text: missing

text: Norovirus GII


text: Chung-Ang University

text: live

text: Pathogen.cl

text: Chung-Ang University

text: South Korea

text: Homo sapiens

text: Acute gastroenteritis

text: Norovirus GII.4[P16] Sydney 2012

text: stool

text: missing

text: Norovirus GII


name: gRNA library SW480 in vitro D0 replicate1

text: zhejiang university

text: live

text: Human

text: ATCC

text: not applicable

text: China: Xuzhou,Jiangsu

text: SW480 [SW-480] cells isolated from the large intestine of a Dukes C colorectal cancer patient and can be used in cancer research.

text: Homo sapiens

text: male

characteristic: sex

text: colon

characteristic: tissue

text: Human sample from Homo sapiens


name: gRNA library SW480 in vitro D0 replicate2

text: zhejiang university

text: live

text: Human

characteristic: NCBI submission model

characteristic: NCBI submission package

text: ATCC

text: not applicable

text: China: Xuzhou,Jiangsu

text: SW480 [SW-481] cells isolated from the large intestine of a Dukes C colorectal cancer patient and can be used in cancer research.

text: Homo sapiens

text: male

text: colon

text: Human sample from Homo sapiens


name: gRNA library SW480 in vitro D7 replicate1

text: zhejiang university

text: live

text: Human

characteristic: age

text: ATCC

text: not applicable

text: China: Xuzhou,Jiangsu

text: SW480 [SW-482] cells isolated from the large intestine of a Dukes C colorectal cancer patient and can be used in cancer research.

text: Homo sapiens

text: male

text: colon

text: Human sample from Homo sapiens


name: gRNA library SW480 in vitro D7 replicate2

text: zhejiang university

text: live

text: Human

text: ATCC

text: not applicable

text: China: Xuzhou,Jiangsu

text: SW480 [SW-483] cells isolated from the large intestine of a Dukes C colorectal cancer patient and can be used in cancer research.

text: Homo sapiens

text: male

text: colon

text: Human sample from Homo sapiens


name: gRNA library SW480 in vitro D15 replicate1

text: zhejiang university

text: live

text: Human

text: ATCC

text: not applicable

text: China: Xuzhou,Jiangsu

text: SW480 [SW-484] cells isolated from the large intestine of a Dukes C colorectal cancer patient and can be used in cancer research.

text: Homo sapiens

text: male

text: colon

text: Human sample from Homo sapiens


name: gRNA library SW480 in vitro D15 replicate2

text: zhejiang university

text: live

text: Human

text: ATCC

text: not applicable

text: China: Xuzhou,Jiangsu

text: SW480 [SW-485] cells isolated from the large intestine of a Dukes C colorectal cancer patient and can be used in cancer research.

text: Homo sapiens

text: male

text: colon

text: Human sample from Homo sapiens


name: gRNA library SW480 in vivo D30 replicate1

text: zhejiang university

text: live

text: Human

text: ATCC

text: not applicable

text: China: Xuzhou,Jiangsu

text: SW480 [SW-486] cells isolated from the large intestine of a Dukes C colorectal cancer patient and can be used in cancer research.

text: Homo sapiens

text: male

text: colon

text: Human sample from Homo sapiens


name: gRNA library SW480 in vivo D30 replicate2

text: zhejiang university

text: live

text: Human

text: ATCC

text: not applicable

text: China: Xuzhou,Jiangsu

text: SW480 [SW-487] cells isolated from the large intestine of a Dukes C colorectal cancer patient and can be used in cancer research.

text: Homo sapiens

text: male

text: colon

text: Human sample from Homo sapiens


Nopalea cochenillifera_Oxford

text: Zhejiang Sci-Tech University

text: live

text: Plant

text: Opuntia cochenillifera

characteristic: cultivar

text: Vegetative Stage

text: not applicable

characteristic: ecotype

text: China:Shanghai

text: not applicable

text: Nopalea cochenillifera

text: epidermis


characteristic: External Id

text: Max Planck Institute for Infection Biology

text: live

text: Microbe, viral or environmental

characteristic: Source material identifiers

text: Mali

text: not provided

text: not provided

text: dry blood spot

text: Plasmodium falciparum

text: Amplicon sequencing of P. falciparum DNA from dry-blood spots om filter paper

text: Microbe sample from Plasmodium falciparum

characteristic: title


text: live

text: Microbe, viral or environmental

characteristic: SRA accession

text: Mali

text: not provided

characteristic: host

text: not provided

characteristic: isolate

text: dry blood spot

text: Plasmodium falciparum


text: PulseNet Next Generation Subtyping Methods Unit

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

characteristic: organism

text: missing

text: missing

text: missing

characteristic: serovar

text: human

characteristic: strain

text: Salmonella enterica


Immune modulating bacteria

text: Vellore Institute of Technology

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: India: Tamil Nadu, Vellore, Vellore Institute of Technology

text: curd

text: Enterococcus durans

text: axenic

text: Microbe sample from Enterococcus durans


JY

text: Southwest University

characteristic: INSDC secondary accession

text: live

text: Plant

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Moli

text: sprouting

text: Yunnan

text: China: Yunnan

text: JS-X

text: Jasminum sambac

text: leaf

characteristic: tissue

text: Plant sample from Jasminum sambac


characteristic: EMS treatment Concentration %

characteristic: External Id

text: University of Queensland

text: live

text: Plant

text: Closed

characteristic: Open vs. Closed Pollination

text: 10-15 days

characteristic: age

text: Patrick Mason and Rajesh Nomula

characteristic: cultivar

text: Three different concentrations (0.05, 0.15 and 0.25 %) of EMS and a zero-control were tested to ascertain how EMS effects survivability, seed yield and mutation rates. Whole genome sequencing (Illumina) of M2 plants was used to determine the number and type of mutations resulting from each treatment level.

characteristic: description

text: Stage 1 (10-15 days post seedling emergence)

text: EMS population

characteristic: ecotype

text: Australia: Gatton

text: EMS treated sample (closed pollination)

text: Sorghum bicolor

text: hermaphrodite

characteristic: sex

characteristic: temp

text: Leaf

text: Sorghum bicolor WGS Illumina sequence. sample no. 26 EMS_0.25_closed_pollinated_Rep1


text: University of Queensland

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Plant

text: Closed

characteristic: SRA accession

text: 10-15 days

text: Patrick Mason and Rajesh Nomula

text: Three different concentrations (0.05, 0.15 and 0.25 %) of EMS and a zero-control were tested to ascertain how EMS effects mutation rates. Whole genome sequencing (Illumina) of M2 plants was used to determine the number and type of mutations resulting from each treatment level.

text: EMS population

text: Australia: Gatton

text: EMS treated sample (closed pollination)

characteristic: isolate

text: Sorghum bicolor

characteristic: organism

text: hermaphrodite

text: Leaf

text: Sorghum bicolor WGS Illumina sequence. sample no. 27 EMS_0.25_closed_pollinated_Rep2

characteristic: title


text: Sichuan Normal University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: China

text: sediment

text: 50g/L glutamate

text: Bacillus subtilis

text: replicate=biological replicate 1

characteristic: replicate

text: cell cultrue

text: Microbe sample from Bacillus subtilis


characteristic: External Id

text: Sichuan Normal University

text: live

text: Microbe, viral or environmental

text: China

text: sediment

text: 50g/L glutamate

text: Bacillus subtilis

text: replicate=biological replicate 2

text: cell cultrue

text: Microbe sample from Bacillus subtilis


text: Sichuan Normal University

text: live

text: Microbe, viral or environmental

text: China

text: sediment

text: 50g/L glutamate

text: Bacillus subtilis

text: replicate=biological replicate 3

text: cell cultrue

text: Microbe sample from Bacillus subtilis


text: Sichuan Normal University

text: live

text: Microbe, viral or environmental

text: China

text: sediment

text: 0g/L glutamate

text: Bacillus subtilis

text: replicate=biological replicate 4

text: cell cultrue

text: Microbe sample from Bacillus subtilis


text: Sichuan Normal University

text: live

text: Microbe, viral or environmental

text: China

text: sediment

text: 0g/L glutamate

text: Bacillus subtilis

text: replicate=biological replicate 5

text: cell cultrue

text: Microbe sample from Bacillus subtilis


text: Sichuan Normal University

text: live

text: Microbe, viral or environmental

text: China

text: sediment

text: 0g/L glutamate

text: Bacillus subtilis

text: replicate=biological replicate 6

text: cell cultrue

text: Microbe sample from Bacillus subtilis


text: Lu Z.J. lab, School of Life Sciences, Tsinghua University

text: live

text: Generic

characteristic: Stage

characteristic: age

text: PBMC

characteristic: cell type

text: missing

characteristic: gender

text: Homo sapiens

text: PBMC


characteristic: INSDC center name

text: live

text: Generic

text: PBMC

text: male

text: Homo sapiens

text: PBMC


characteristic: INSDC first public

text: live

text: Generic

text: PBMC

text: female

text: Homo sapiens

text: PBMC


text: Jagiellonian University, Faculty of Biochemistry, Biophysics and Biotechnology

text: live

text: Human

characteristic: SRA accession

text: Department of Medical Biotechnology; Faculty of Biochemistry, Biophysics and Biotechnology; Jagiellonian University, Krakow, Poland

text: hiPSC DMB01

text: hiPSC-derived cardiomyocytes

text: Poland

text: Homo sapiens

text: male

characteristic: sex

text: not applicable

characteristic: tissue

text: Human sample from Homo sapiens


name: WT exp RNA Replicate 2 from Phaeodactylum tricornutum

text: Ningbo University

text: live

text: MIMARKS.specimen

text: MIGS/MIMS/MIMARKS.plant-associated

text: Keywords: GSC:MIxS;MIMARKS:6.0

characteristic: description

characteristic: host

text: Phaeodactylum tricornutum

characteristic: organism

text: CCAP 1055/1

characteristic: strain

characteristic: title


WT exp RNA Replicate 3

text: Ningbo University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS.eu

characteristic: NCBI submission model

text: MIGS/MIMS/MIMARKS.plant-associated

characteristic: NCBI submission package

text: Keywords: GSC:MIxS;MIGS:6.0

text: f/2 medium

text: Phaeodactylum tricornutum

text: CCAP 1055/1

text: MIGS Eukaryotic sample from Phaeodactylum tricornutum


WT sta RNA Replicate 1

characteristic: External Id

text: Ningbo University

text: live

text: MIGS.eu

text: MIGS/MIMS/MIMARKS.plant-associated

text: Keywords: GSC:MIxS;MIGS:6.0

text: f/2 medium

text: Phaeodactylum tricornutum

text: CCAP 1055/1


text: Ottawa Research and Development Center

text: live

text: Microbe, viral or environmental

text: Canada: Ottawa, Ontario

text: Superabsorbent polymer granules inoculated with AMF Rhizophagus irregularis DAOM 197198

text: Chryseobacterium sp. MHB01

text: single cell

text: Microbe sample from Chryseobacterium sp. MHB01


text: Ottawa Research and Development Center

text: live

text: Microbe, viral or environmental

text: Canada: Ottawa, Ontario

text: Rhodococcus qingshengii

text: single cell

text: Microbe sample from Rhodococcus qingshengii


text: Ottawa Research and Development Center

text: live

text: Microbe, viral or environmental

text: Canada: Ottawa, Ontario

text: Agrobacterium tumefaciens

text: single cell

text: Microbe sample from Agrobacterium tumefaciens


WT exp RNA Replicate 2

text: Ningbo University

text: live

text: MIGS.eu

text: MIGS/MIMS/MIMARKS.plant-associated

text: Keywords: GSC:MIxS;MIGS:6.0

text: f/2 medium

text: Phaeodactylum tricornutum

text: CCAP 1055/1


WT sta RNA Replicate 3

text: Ningbo University

text: live

text: MIGS.eu

text: MIGS/MIMS/MIMARKS.plant-associated

text: Keywords: GSC:MIxS;MIGS:6.0

text: f/2 medium

text: Phaeodactylum tricornutum

text: CCAP 1055/1


ELO5aKO exp RNA Replicate 1

text: Ningbo University

text: live

text: MIGS.eu

text: MIGS/MIMS/MIMARKS.plant-associated

text: Keywords: GSC:MIxS;MIGS:6.0

text: f/2 medium

text: Phaeodactylum tricornutum

text: CCAP 1055/1


ELO5aKO exp RNA Replicate 2

text: Ningbo University

text: live

text: MIGS.eu

text: MIGS/MIMS/MIMARKS.plant-associated

text: Keywords: GSC:MIxS;MIGS:6.0

text: f/2 medium

text: Phaeodactylum tricornutum

text: CCAP 1055/1


ELO5aKO exp RNA Replicate 3

text: Ningbo University

text: live

text: MIGS.eu

text: MIGS/MIMS/MIMARKS.plant-associated

text: Keywords: GSC:MIxS;MIGS:6.0

text: f/2 medium

text: Phaeodactylum tricornutum

text: CCAP 1055/1


ELO5aKO sta RNA Replicate 1

text: Ningbo University

text: live

text: MIGS.eu

text: MIGS/MIMS/MIMARKS.plant-associated

text: Keywords: GSC:MIxS;MIGS:6.0

text: f/2 medium

text: Phaeodactylum tricornutum

text: CCAP 1055/1


ELO5aKO sta RNA Replicate 2

text: Ningbo University

text: live

text: MIGS.eu

text: MIGS/MIMS/MIMARKS.plant-associated

text: Keywords: GSC:MIxS;MIGS:6.0

text: f/2 medium

text: Phaeodactylum tricornutum

text: CCAP 1055/1


ELO5aKO sta RNA Replicate 3

text: Ningbo University

text: live

text: MIGS.eu

text: MIGS/MIMS/MIMARKS.plant-associated

text: Keywords: GSC:MIxS;MIGS:6.0

text: f/2 medium

text: Phaeodactylum tricornutum

text: CCAP 1055/1


WT HT1d RNA Replicate 1

text: Ningbo University

text: live

text: MIGS.eu

text: MIGS/MIMS/MIMARKS.plant-associated

text: Keywords: GSC:MIxS;MIGS:6.0

text: f/2 medium

text: Phaeodactylum tricornutum

text: CCAP 1055/1


WT HT1d RNA Replicate 2

text: Ningbo University

text: live

text: MIGS.eu

text: MIGS/MIMS/MIMARKS.plant-associated

text: Keywords: GSC:MIxS;MIGS:6.0

text: f/2 medium

text: Phaeodactylum tricornutum

text: CCAP 1055/1


WT HT1d RNA Replicate 3

text: Ningbo University

text: live

text: MIGS.eu

text: MIGS/MIMS/MIMARKS.plant-associated

text: Keywords: GSC:MIxS;MIGS:6.0

text: f/2 medium

text: Phaeodactylum tricornutum

text: CCAP 1055/1


WT HT3d RNA Replicate 1

text: Ningbo University

text: live

text: MIGS.eu

text: MIGS/MIMS/MIMARKS.plant-associated

text: Keywords: GSC:MIxS;MIGS:6.0

text: f/2 medium

text: Phaeodactylum tricornutum

text: CCAP 1055/1


WT HT3d RNA Replicate 2

text: Ningbo University

text: live

text: MIGS.eu

text: MIGS/MIMS/MIMARKS.plant-associated

text: Keywords: GSC:MIxS;MIGS:6.0

text: f/2 medium

text: Phaeodactylum tricornutum

text: CCAP 1055/1


WT HT3d RNA Replicate 3

text: Ningbo University

text: live

text: MIGS.eu

text: MIGS/MIMS/MIMARKS.plant-associated

text: Keywords: GSC:MIxS;MIGS:6.0

text: f/2 medium

text: Phaeodactylum tricornutum

text: CCAP 1055/1


ELO5aKO HT1d RNA Replicate 1

text: Ningbo University

text: live

text: MIGS.eu

text: MIGS/MIMS/MIMARKS.plant-associated

text: Keywords: GSC:MIxS;MIGS:6.0

text: f/2 medium

text: Phaeodactylum tricornutum

text: CCAP 1055/1


ELO5aKO HT1d RNA Replicate 2

text: Ningbo University

text: live

text: MIGS.eu

text: MIGS/MIMS/MIMARKS.plant-associated

text: Keywords: GSC:MIxS;MIGS:6.0

text: f/2 medium

text: Phaeodactylum tricornutum

text: CCAP 1055/1


ELO5aKO HT1d RNA Replicate 3

text: Ningbo University

text: live

text: MIGS.eu

text: MIGS/MIMS/MIMARKS.plant-associated

text: Keywords: GSC:MIxS;MIGS:6.0

text: f/2 medium

text: Phaeodactylum tricornutum

text: CCAP 1055/1


text: Southwest University

text: live

text: Plant

characteristic: age

text: Shancha

characteristic: cultivar

text: sprouting

text: Chongqing

characteristic: ecotype

text: China: Chongqing

text: CJ-X

characteristic: isolate

text: Camellia japonica

text: leaf

text: Plant sample from Camellia japonica


ELO5aKO HT3d RNA Replicate 1

text: Ningbo University

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MIGS.eu

text: MIGS/MIMS/MIMARKS.plant-associated

characteristic: SRA accession

text: Keywords: GSC:MIxS;MIGS:6.0

text: f/2 medium

text: Phaeodactylum tricornutum

text: CCAP 1055/1


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

characteristic: host

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

characteristic: serovar

text: Salmonella enterica


text: USDA Animal Plant Health Inspection Service-National Veterinary Services Laboratories - DBPL

text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: Thompson-Bishop-Sparks State Diagnostic Laboratory, Auburn, AL

text: clinical isolate

characteristic: description

text: USA: AL

text: Gallus gallus

text: Omphalitis

text: Escherichia coli

characteristic: organism

text: NAHLN (USDA-APHIS-VS) Veterinary Pathogen Umbrella Project

text: active surveillance not initiated by an outbreak

text: animal

text: not applicable

characteristic: strain

text: One Health Enteric sample from Escherichia coli


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: AL

text: Gallus gallus

text: Septicemia

text: Escherichia coli

text: National Veterinary Services Laboratories

text: animal

text: not applicable

characteristic: title


text: live

characteristic: INSDC status

text: One Health Enteric

characteristic: NCBI submission model

characteristic: NCBI submission package

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: AL

text: Gallus gallus

text: Colibacillosis

text: Escherichia coli

text: animal

text: not applicable


characteristic: External Id

text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: California Animal Health & Food Safety Laboratory System, Davis, CA

text: clinical isolate

text: USA: CA

text: Gallus gallus

text: wound/ abscess

text: Escherichia coli

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: Colorado State University Veterinary Diagnostic Laboratory, Fort Collins, CO

text: clinical isolate

text: USA: CO

text: Gallus gallus

text: Coelomitis

text: Escherichia coli

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: Iowa State University Veterinary Diagnostic Laboratory, Ames, IA

text: clinical isolate

text: USA: IA

text: Gallus gallus

text: polyserositis

text: Escherichia coli

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: IA

text: Gallus gallus

text: Fowl cholera - sepsis

text: Escherichia coli

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: Veterinary Diagnostic Laboratory of University of Urbana-Champaign, Urbana, IL

text: clinical isolate

text: USA: IL

text: Gallus gallus

text: EGG PERITONITIS

text: Escherichia coli

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: Purdue University Animal Disease Diagnostic Laboratory, West Lafayette, IN

text: clinical isolate

text: USA: IN

text: Gallus gallus

text: collibacillosis

text: Escherichia coli

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: IN

text: Gallus gallus

text: air sacculitis with colibacillosis and colisepticemia

text: Escherichia coli

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: Murray State University Breathitt Veterinary Center, Hopkinsville, KY

text: clinical isolate

text: USA: KY

text: Gallus gallus

text: Pericarditis and myocarditis

text: Escherichia coli

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: KY

text: Gallus gallus

text: Enteritis

text: Escherichia coli

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: KY

text: Gallus gallus

text: coelomitits

text: Escherichia coli

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: University of Minnesota Veterinary Diagnostic Laboratory, St. Paul, MN

text: clinical isolate

text: USA: MN

text: Gallus gallus

text: meningoencephalitis

text: Escherichia coli

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: University of Missouri Veterinary Medical Diagnostic Laboratory, Columbia, MO

text: clinical isolate

text: USA: MO

text: Gallus gallus

text: peritonitis

text: Escherichia coli

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: MO

text: Gallus gallus

text: peritonitis

text: Escherichia coli

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: MO

text: Gallus gallus

text: subcutaneous hemorrhage

text: Escherichia coli

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: Mississippi State University Veterinary Research & Diagnostic Laboratory, Pearl, MS

text: clinical isolate

text: USA: MS

text: Gallus gallus

text: Severe colisepticemia

text: Escherichia coli

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: MS

text: Gallus gallus

text: Escherichia coli yolk sac infection

text: Escherichia coli

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: North Carolina Veterinary Diagnostic Laboratory System, Rollins Animal Disease Diagnostic Laboratory, Raleigh, NC

text: clinical isolate

text: USA: NC

text: Gallus gallus

text: colibacillosis

text: Escherichia coli

text: animal

text: not applicable


text: USDA Animal Plant Health Inspection Service-National Veterinary Services Laboratories - DBPL

text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: Cornell Animal Health Diagnostic Center, Ithaca, NY

text: clinical isolate

text: USA: NY

text: Gallus gallus

text: Infection

text: Escherichia coli

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: Ohio Department of Agriculture Animal Disease Diagnostic Laboratory, Reynoldsburg, OH

text: clinical isolate

text: USA: OH

text: Gallus gallus

text: Acute bacterial infections of yolk sac.

text: Escherichia coli

text: NAHLN (USDA-APHIS-VS) Veterinary Pathogen Umbrella Project

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: OH

text: Gallus gallus

text: Mild increase in mortality. Seeing swollen heads and peritonitis in flock.

text: Escherichia coli

text: active surveillance not initiated by an outbreak

text: animal

text: not applicable

text: One Health Enteric sample from Escherichia coli


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: Pennsylvania State University Animal Diagnostic Laboratory, University Park, PA

text: clinical isolate

text: USA: PA

text: Gallus gallus

text: Bacterial septicemia

text: Escherichia coli

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: PA

text: Gallus gallus

text: E. coli recovered

text: Escherichia coli

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: Pennsylvania Animal Diagnostic Laboratory System, Pennsylvania Veterinary Laboratory, Harrisburg, PA

text: clinical isolate

text: USA: PA

text: Gallus gallus

text: Suspected peritonitis

text: Escherichia coli

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: South Dakota State University Animal Disease Research and Diagnostics Laboratory, Brookings, SD

text: clinical isolate

text: USA: SD

text: Gallus gallus

text: pneumonia/septicemia

text: Escherichia coli

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: University of Wisconsin Veterinary Diagnostic Laboratory, Madison, WI

text: clinical isolate

text: USA: WI

text: Gallus gallus

text: subacute to chronic infectious laryngotracheitis infection, with re-epithelialization of respiratory epithelial cells (i.e., late infection to early recovery phase) and air sacculitis

text: Escherichia coli

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: WI

text: Gallus gallus

text: coccidiosis with abnormal intestinal bacterial overgrowth and spread of bacteria and toxins systemically (sepsis)

text: Escherichia coli

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: WI

text: Gallus gallus

text: fowl cholera

text: Escherichia coli

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: WI

text: Gallus gallus

text: fatty liver hemorrhagic syndrome

text: Escherichia coli

text: National Veterinary Services Laboratories

text: animal

text: not applicable


text: live

text: One Health Enteric

text: veterinary diagnostic laboratory

text: clinical isolate

text: USA: WI

text: Gallus gallus

text: Colibacillosis/Conjunctivitis/Crop mycosis

text: Escherichia coli

text: animal

text: not applicable


text: PulseNet Next Generation Subtyping Methods Unit

text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Campylobacter jejuni

text: missing

text: Campylobacter jejuni


ELO5aKO HT3d RNA Replicate 2

text: Ningbo University

text: live

text: MIGS.eu

text: MIGS/MIMS/MIMARKS.plant-associated

text: Keywords: GSC:MIxS;MIGS:6.0

text: f/2 medium

text: Phaeodactylum tricornutum

text: CCAP 1055/1

text: MIGS Eukaryotic sample from Phaeodactylum tricornutum


ELO5aKO HT3d RNA Replicate 3

text: Ningbo University

text: live

text: MIGS.eu

text: MIGS/MIMS/MIMARKS.plant-associated

text: Keywords: GSC:MIxS;MIGS:6.0

text: f/2 medium

text: Phaeodactylum tricornutum

text: CCAP 1055/1


characteristic: ID

text: Council for Agricultural Research and Economics (CREA)

text: live

text: MIGS/MIMS/MIMARKS.plant-associated

text: MIMARKS.survey

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: Italy: Turi

text: Vitis vinifera

text: 40.95376095 N 16.97505846 E

text: plant metagenome

text: MIMARKS Survey related sample from plant metagenome

text: Botrytis cinerea

characteristic: treatment


characteristic: INSDC center name

text: live

text: MIGS/MIMS/MIMARKS.plant-associated

text: MIMARKS.survey

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: Italy: Turi

text: Vitis vinifera

text: 40.95376095 N 16.97505846 E

text: plant metagenome

text: Cladosporium cladosporioides


characteristic: INSDC first public

text: live

text: MIGS/MIMS/MIMARKS.plant-associated

text: MIMARKS.survey

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: Italy: Turi

text: Vitis vinifera

text: 40.95376095 N 16.97505846 E

text: plant metagenome

text: Alternaria alternata


text: live

text: MIGS/MIMS/MIMARKS.plant-associated

text: MIMARKS.survey

characteristic: SRA accession

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: Italy: Turi

text: Vitis vinifera

text: 40.95376095 N 16.97505846 E

text: plant metagenome

text: Penicillium digitatum


text: live

text: MIGS/MIMS/MIMARKS.plant-associated

text: MIMARKS.survey

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: Italy: Turi

text: Vitis vinifera

characteristic: host

text: 40.95376095 N 16.97505846 E

text: plant metagenome

text: Penicillium glabrum


text: live

text: MIGS/MIMS/MIMARKS.plant-associated

text: MIMARKS.survey

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: Italy: Turi

text: Vitis vinifera

text: 40.95376095 N 16.97505846 E

text: plant metagenome

text: Aspergillus niger


text: live

text: MIGS/MIMS/MIMARKS.plant-associated

text: MIMARKS.survey

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: Italy: Turi

text: Vitis vinifera

text: 40.95376095 N 16.97505846 E

text: plant metagenome

text: Starmerella bacillaris


text: live

text: MIGS/MIMS/MIMARKS.plant-associated

text: MIMARKS.survey

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: Italy: Turi

text: Vitis vinifera

text: 40.95376095 N 16.97505846 E

text: plant metagenome

text: Saturnispora diversa


text: live

text: MIGS/MIMS/MIMARKS.plant-associated

text: MIMARKS.survey

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: Italy: Turi

text: Vitis vinifera

text: 40.95376095 N 16.97505846 E

text: plant metagenome

text: Aureobasidium pullulans


text: live

text: MIGS/MIMS/MIMARKS.plant-associated

text: MIMARKS.survey

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: Italy: Turi

text: Vitis vinifera

text: 40.95376095 N 16.97505846 E

text: plant metagenome

text: Hanseniaspora uvarum


text: live

text: Pathogen.cl

text: missing

text: USA

text: missing

text: missing

text: missing

characteristic: isolate

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

characteristic: serovar

text: Salmonella enterica


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Escherichia coli

characteristic: organism

text: missing

text: Escherichia coli


text: Northwest Normal University

text: live

text: Metagenome or environmental

text: China:Gansu,lanzhou

text: Symphytum officinale

text: root

text: Heavy metal stress

text: missing

text: plant metagenome

text: artificial cultivation

text: endophytes

characteristic: strain

text: Metagenome or environmental sample from plant metagenome


R0 (sludge metagenome)

text: Hebei University of Science and Technology

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: China:Hebei

text: Anaerobic fermentation substrate sludge

text: missing

text: sludge metagenome

characteristic: replicate

text: Metagenome or environmental sample from sludge metagenome


R1 (sludge metagenome)

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

text: China:Hebei

text: Anaerobic fermentation substrate sludge

text: missing

text: sludge metagenome

characteristic: title


R2 (sludge metagenome)

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

text: China:Hebei

text: Anaerobic fermentation substrate sludge

text: missing

text: sludge metagenome


R3 (sludge metagenome)

characteristic: External Id

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: China:Hebei

text: Anaerobic fermentation substrate sludge

text: missing

text: sludge metagenome


R4 (sludge metagenome)

text: live

text: Metagenome or environmental

text: China:Hebei

text: Anaerobic fermentation substrate sludge

text: missing

text: sludge metagenome


R5 (sludge metagenome)

text: live

text: Metagenome or environmental

text: China:Hebei

text: Anaerobic fermentation substrate sludge

text: missing

text: sludge metagenome


Human breastmilk from women with GDM

text: Centre for Clinical Research

text: live

text: Metagenome or environmental

text: Denmark:North Denmark

text: Homo sapiens

text: 57.456779 N 9.995764 E

text: human gut metagenome

text: Metagenome or environmental sample from human gut metagenome


text: Nanjing University of Chinese Medicine

text: live

text: Metagenome or environmental

text: China:Nanjing

text: mouse

text: missing

text: mouse gut metagenome

text: Metagenome or environmental sample from mouse gut metagenome


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Shigella flexneri

text: missing

text: Shigella flexneri


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Campylobacter jejuni

text: missing

text: Campylobacter jejuni


text: Binzhou University

text: live

text: Pathogen.cl

text: Qinghuan Zhang

text: China:Zhuhai

text: Homo sapiens

text: infection

text: Bronchoalveolar lavage fluid

text: 22.28 N 113.58 E

text: Klebsiella pneumoniae

text: Pathogen: clinical or host-associated sample from Klebsiella pneumoniae


text: Southwest University

text: live

text: Plant

characteristic: age

text: Starkrimson

characteristic: cultivar

text: sprouting

text: Liaoning

characteristic: ecotype

text: China: Liaoning

text: MD-X

text: Malus domestica

text: leaf

characteristic: tissue

text: Plant sample from Malus domestica


text: Jagiellonian University

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Model organism or animal

characteristic: SRA accession

text: adult

text: Poland: Bioogra

text: 54.822247 N 17.9974 E

text: Anguis fragilis

text: tissue sample

characteristic: sex

text: tailtip

text: Model organism or animal sample from Anguis fragilis


text: Jagiellonian University

text: live

text: Model organism or animal

text: adult

text: Poland: Kopanina

characteristic: isolate

text: 52.550898 N 16.55314 E

text: Anguis fragilis

characteristic: organism

text: tissue sample

text: tailtip


text: Jagiellonian University

characteristic: INSDC last update

text: live

text: Model organism or animal

text: adult

text: Poland: Posada Rybotycka

text: 49.666386 N 22.587813 E

text: Anguis colchica

text: tissue sample

text: tailtip

text: Model organism or animal sample from Anguis colchica


text: Jagiellonian University

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

text: adult

text: Poland: Brody

text: 49.8784 N 19.725 E

text: Anguis colchica

text: tissue sample

text: tailtip


text: Southwest Forestry University

text: live

text: Microbe, viral or environmental

text: China: Kunming

text: not applicable

characteristic: host

text: not applicable

text: not applicable

text: Papiliotrema laurentii

text: cell culture

characteristic: strain

text: Microbe sample from Papiliotrema laurentii

characteristic: title


characteristic: External Id

text: Southwest Forestry University

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: China: Kunming

text: not applicable

text: not applicable

text: not applicable

text: Papiliotrema laurentii

text: cell culture


text: live

text: Pathogen.cl

characteristic: NCBI submission package

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

characteristic: serovar

text: Salmonella enterica


text: School of Pharmaceutical Sciences of Ribeirao Preto - University of Sao Paulo

text: live

text: Pathogen.env

text: RL

text: Brazil:Serrana

text: cabbage

text: 21.20621214 S 47.60181433 W

text: Klebsiella pneumoniae

text: Pathogen: environmental/food/other sample from Klebsiella pneumoniae


text: live

text: Human

text: not collected

characteristic: age

text: Institute of Hepatology and Gastroenterology,Tongji Hospital of Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China

text: human epithelial cell

text: China:Wuhan

text: not collected

text: Homo sapiens

text: cell culture

text: not collected

text: not collected

characteristic: tissue

text: Caco2 cells treated with microbiota-derived extracellular vesicles

text: 100μg/ml microbiota-derived extracellular vesicles from the colon of colitis mice

characteristic: treatment


text: Huazhong University of Science and Technology

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Human

characteristic: SRA accession

text: not collected

text: human epithelial cell

text: China:Wuhan

text: not collected

text: Homo sapiens

text: cell culture

text: not collected

text: not collected

text: Caco2 cells treated with microbiota-derived extracellular vesicles in the second cell


text: live

text: Human

text: not collected

text: human epithelial cell

text: China:Wuhan

text: not collected

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: cell culture

text: not collected

characteristic: sex

text: not collected


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Human

text: not collected

text: human epithelial cell

text: China:Wuhan

text: not collected

text: Homo sapiens

text: cell culture

text: not collected

text: not collected

text: Caco2 cells treated with PBS

text: PBS


text: live

text: Pathogen.env

text: RL

text: Brazil:Serrana

text: Spinach

text: 21.20621214 S 47.60181433 W

text: Escherichia coli

characteristic: strain

text: Pathogen: environmental/food/other sample from Escherichia coli

characteristic: title


characteristic: External Id

text: State Key Laboratory for Diagnosis and Treatment of Infectious Diseases

text: live

characteristic: INSDC status

text: Metagenome or environmental

text: China:Zhejiang,Hangzhou

text: Homo sapiens

characteristic: host

text: fecal samples

text: 30.16 N 120.09 E

text: human gut metagenome


text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: RL

text: Brazil:Serrana

text: Lettuce

text: 21.20621214 S 47.60181433 W

text: Pseudomonas aeruginosa

text: Pathogen: environmental/food/other sample from Pseudomonas aeruginosa


text: Policlinico Sant'Orsola-Malpighi

text: live

text: Pathogen.cl

text: Azienda Ospedaliera Universitaria Integrata

characteristic: genotype

text: Italy: Verona

text: Homo sapiens

text: Klebsiella pneumoniae infection

text: blood

text: 45.45342827 N 10.98289984 E

text: Klebsiella pneumoniae


Control 0-1

text: Jiangsu Ocean University

text: live

text: Model organism or animal

text: not collected

characteristic: age

text: not applicable

characteristic: breed

text: not applicable

characteristic: cultivar

text: not collected

text: not applicable

characteristic: ecotype

text: China

text: not applicable

text: 34.61 N 119.22 E

text: Megalobrama amblycephala

text: not collected

text: not applicable

text: hepatopancreas

characteristic: tissue

text: Model organism or animal sample from Megalobrama amblycephala


Control 0-2

text: Jiangsu Ocean University

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Model organism or animal

characteristic: SRA accession

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not applicable

text: China

text: not applicable

characteristic: isolate

text: 34.61 N 119.23 E

text: Megalobrama amblycephala

characteristic: organism

text: not collected

text: not applicable

text: hepatopancreas


Control 0-3

text: Jiangsu Ocean University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not applicable

text: China

text: not applicable

text: 34.61 N 119.24 E

text: Megalobrama amblycephala

text: not collected

characteristic: sex

text: not applicable

characteristic: strain

text: hepatopancreas

characteristic: title


Control 1-1

characteristic: External Id

text: Jiangsu Ocean University

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not applicable

text: China

text: not applicable

text: 34.61 N 119.25 E

text: Megalobrama amblycephala

text: not collected

text: not applicable

text: hepatopancreas


Control 1-2

text: Jiangsu Ocean University

text: live

text: Model organism or animal

text: not collected

characteristic: age

text: not applicable

characteristic: breed

text: not applicable

characteristic: cultivar

text: not collected

text: not applicable

text: China

text: not applicable

text: 34.61 N 119.26 E

text: Megalobrama amblycephala

text: not collected

text: not applicable

text: hepatopancreas


Control 1-3

text: Jiangsu Ocean University

characteristic: INSDC center name

text: live

text: Model organism or animal

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not applicable

characteristic: ecotype

text: China

text: not applicable

text: 34.61 N 119.27 E

text: Megalobrama amblycephala

text: not collected

text: not applicable

text: hepatopancreas

characteristic: tissue


MaINTL 0-1

text: Jiangsu Ocean University

characteristic: INSDC first public

text: live

text: Model organism or animal

characteristic: SRA accession

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not applicable

text: China

text: not applicable

characteristic: isolate

text: 34.61 N 119.28 E

text: Megalobrama amblycephala

text: not collected

text: not applicable

text: hepatopancreas


MaINTL 0-2

text: Jiangsu Ocean University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not applicable

text: China

text: not applicable

text: 34.61 N 119.29 E

text: Megalobrama amblycephala

characteristic: organism

text: not collected

text: not applicable

text: hepatopancreas


MaINTL 0-3

text: Jiangsu Ocean University

text: live

text: Model organism or animal

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not applicable

text: China

text: not applicable

text: 34.61 N 119.30 E

text: Megalobrama amblycephala

text: not collected

characteristic: sex

text: not applicable

characteristic: strain

text: hepatopancreas

characteristic: title


MaINTL 1-1

characteristic: External Id

text: Jiangsu Ocean University

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not applicable

text: China

text: not applicable

text: 34.61 N 119.31 E

text: Megalobrama amblycephala

text: not collected

text: not applicable

text: hepatopancreas


MaINTL 1-2

text: Jiangsu Ocean University

text: live

text: Model organism or animal

characteristic: NCBI submission package

text: not collected

characteristic: age

text: not applicable

characteristic: breed

text: not applicable

text: not collected

text: not applicable

text: China

text: not applicable

text: 34.61 N 119.32 E

text: Megalobrama amblycephala

text: not collected

text: not applicable

text: hepatopancreas


MaINTL 1-3

text: Jiangsu Ocean University

characteristic: INSDC center name

text: live

text: Model organism or animal

text: not collected

text: not applicable

text: not applicable

characteristic: cultivar

text: not collected

text: not applicable

characteristic: ecotype

text: China

text: not applicable

text: 34.61 N 119.33 E

text: Megalobrama amblycephala

text: not collected

text: not applicable

text: hepatopancreas


text: University of Ibadan

characteristic: INSDC first public

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: Nigeria

text: Homo sapiens

characteristic: host

text: feces

text: 7.4433 N 3.9003 E

text: human gut metagenome


text: Southwest University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Plant

text: Pipa

text: sprouting

text: Chongqing

text: China: Chongqing

text: EJ-X

characteristic: isolate

text: Eriobotrya japonica

text: leaf

characteristic: tissue

text: Plant sample from Eriobotrya japonica


text: Shanghai Ninth People's Hospital, Shanghai Jiaotong University School of Medicine

text: live

text: Human

text: not applicable

text: China: Shanghai

text: not applicable

text: Homo sapiens

characteristic: organism

text: not applicable

characteristic: sex

text: endometrium

characteristic: title


characteristic: External Id

text: live

characteristic: INSDC status

text: Human

characteristic: NCBI submission model

text: not applicable

text: China: Shanghai

text: not applicable

text: Homo sapiens

text: not applicable

text: endometrium


text: Old

characteristic: Age

text: Biology Centre CAS

text: live

text: Top

characteristic: Layer

text: MIMARKS.survey

characteristic: NCBI submission package

characteristic: Replicate

text: Alder

characteristic: Tree species

characteristic: depth

text: Keywords: GSC:MIxS;MIMARKS:6.0

characteristic: description

characteristic: elev

text: temperate biome [ENVO_01001831]

text: coal mining [ENVO_01001440]

text: forest soil [ENVO_00002261]

text: Czech Republic: Sokolov

text: 50.23 N 12.67 E

text: soil metagenome

text: Alder Old Top 1


text: Old

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Sub

text: MIMARKS.survey

characteristic: SRA accession

text: Alder

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: temperate biome [ENVO_01001831]

text: coal mining [ENVO_01001440]

text: forest soil [ENVO_00002261]

text: Czech Republic: Sokolov

text: 50.23 N 12.67 E

text: soil metagenome

text: Alder Old Sub 1


text: Old

text: Biology Centre CAS

text: live

text: Top

text: MIMARKS.survey

text: Alder

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: temperate biome [ENVO_01001831]

text: coal mining [ENVO_01001440]

text: forest soil [ENVO_00002261]

text: Czech Republic: Sokolov

text: 50.23 N 12.67 E

text: soil metagenome

characteristic: organism

text: Alder Old Top 2

characteristic: title


text: Old

characteristic: External Id

text: Biology Centre CAS

text: live

characteristic: INSDC status

text: Sub

text: MIMARKS.survey

text: Alder

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: temperate biome [ENVO_01001831]

text: coal mining [ENVO_01001440]

text: forest soil [ENVO_00002261]

text: Czech Republic: Sokolov

text: 50.23 N 12.67 E

text: soil metagenome

text: Alder Old Sub 2


text: Old

characteristic: Age

text: Biology Centre CAS

text: live

text: Top

text: MIMARKS.survey

characteristic: NCBI submission model

text: Alder

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: temperate biome [ENVO_01001831]

text: coal mining [ENVO_01001440]

text: forest soil [ENVO_00002261]

text: Czech Republic: Sokolov

text: 50.23 N 12.67 E

text: soil metagenome

text: Alder Old Top 3


text: Old

text: Biology Centre CAS

text: live

text: Sub

characteristic: Layer

text: MIMARKS.survey

characteristic: NCBI submission package

text: Alder

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: temperate biome [ENVO_01001831]

text: coal mining [ENVO_01001440]

text: forest soil [ENVO_00002261]

text: Czech Republic: Sokolov

text: 50.23 N 12.67 E

text: soil metagenome

text: Alder Old Sub 3


text: Young

text: Biology Centre CAS

text: live

text: Top

text: MIMARKS.survey

characteristic: Replicate

text: Alder

characteristic: Tree species

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: temperate biome [ENVO_01001831]

text: coal mining [ENVO_01001440]

text: forest soil [ENVO_00002261]

text: Czech Republic: Sokolov

text: 50.23 N 12.67 E

text: soil metagenome

text: Alder Young Top 1


text: Young

text: Biology Centre CAS

text: live

text: Sub

text: MIMARKS.survey

text: Alder

characteristic: depth

text: Keywords: GSC:MIxS;MIMARKS:6.0

characteristic: description

text: temperate biome [ENVO_01001831]

text: coal mining [ENVO_01001440]

text: forest soil [ENVO_00002261]

text: Czech Republic: Sokolov

text: 50.23 N 12.67 E

text: soil metagenome

text: Alder Young Sub 1


text: Young

text: Biology Centre CAS

characteristic: INSDC center name

text: live

text: Top

text: MIMARKS.survey

text: Alder

text: Keywords: GSC:MIxS;MIMARKS:6.0

characteristic: elev

text: temperate biome [ENVO_01001831]

text: coal mining [ENVO_01001440]

text: forest soil [ENVO_00002261]

text: Czech Republic: Sokolov

text: 50.23 N 12.67 E

text: soil metagenome

text: Alder Young Top 2


text: Young

text: Biology Centre CAS

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Sub

text: MIMARKS.survey

text: Alder

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: temperate biome [ENVO_01001831]

text: coal mining [ENVO_01001440]

text: forest soil [ENVO_00002261]

text: Czech Republic: Sokolov

text: 50.23 N 12.67 E

text: soil metagenome

text: Alder Young Sub 2


text: Young

text: Biology Centre CAS

characteristic: INSDC secondary accession

text: live

text: Top

text: MIMARKS.survey

characteristic: SRA accession

text: Alder

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: temperate biome [ENVO_01001831]

text: coal mining [ENVO_01001440]

text: forest soil [ENVO_00002261]

text: Czech Republic: Sokolov

text: 50.23 N 12.67 E

text: soil metagenome

text: Alder Young Top 3


text: Young

text: Biology Centre CAS

text: live

text: Sub

text: MIMARKS.survey

text: Alder

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: temperate biome [ENVO_01001831]

text: coal mining [ENVO_01001440]

text: forest soil [ENVO_00002261]

text: Czech Republic: Sokolov

text: 50.23 N 12.67 E

text: soil metagenome

characteristic: organism

text: Alder Young Sub 3

characteristic: title


text: Old

characteristic: External Id

text: Biology Centre CAS

text: live

characteristic: INSDC status

text: Top

text: MIMARKS.survey

text: Pine

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: temperate biome [ENVO_01001831]

text: coal mining [ENVO_01001440]

text: forest soil [ENVO_00002261]

text: Czech Republic: Sokolov

text: 50.23 N 12.67 E

text: soil metagenome

text: Pine Old Top 1


text: Old

characteristic: Age

text: Biology Centre CAS

text: live

text: Sub

text: MIMARKS.survey

characteristic: NCBI submission model

text: Pine

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: temperate biome [ENVO_01001831]

text: coal mining [ENVO_01001440]

text: forest soil [ENVO_00002261]

text: Czech Republic: Sokolov

text: 50.23 N 12.67 E

text: soil metagenome

text: Pine Old Sub 1


text: Old

text: Biology Centre CAS

text: live

text: Top

characteristic: Layer

text: MIMARKS.survey

characteristic: NCBI submission package

text: Pine

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: temperate biome [ENVO_01001831]

text: coal mining [ENVO_01001440]

text: forest soil [ENVO_00002261]

text: Czech Republic: Sokolov

text: 50.23 N 12.67 E

text: soil metagenome

text: Pine Old Top 2


text: Old

text: Biology Centre CAS

text: live

text: Sub

text: MIMARKS.survey

characteristic: Replicate

text: Pine

characteristic: Tree species

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: temperate biome [ENVO_01001831]

text: coal mining [ENVO_01001440]

text: forest soil [ENVO_00002261]

text: Czech Republic: Sokolov

text: 50.23 N 12.67 E

text: soil metagenome

text: Pine Old Sub 2


text: Old

text: Biology Centre CAS

text: live

text: Top

text: MIMARKS.survey

text: Pine

characteristic: depth

text: Keywords: GSC:MIxS;MIMARKS:6.0

characteristic: description

text: temperate biome [ENVO_01001831]

text: coal mining [ENVO_01001440]

text: forest soil [ENVO_00002261]

text: Czech Republic: Sokolov

text: 50.23 N 12.67 E

text: soil metagenome

text: Pine Old Top 3


text: Old

text: Biology Centre CAS

characteristic: INSDC center name

text: live

text: Sub

text: MIMARKS.survey

text: Pine

text: Keywords: GSC:MIxS;MIMARKS:6.0

characteristic: elev

text: temperate biome [ENVO_01001831]

text: coal mining [ENVO_01001440]

text: forest soil [ENVO_00002261]

text: Czech Republic: Sokolov

text: 50.23 N 12.67 E

text: soil metagenome

text: Pine Old Sub 3


text: Young

text: Biology Centre CAS

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Top

text: MIMARKS.survey

text: Pine

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: temperate biome [ENVO_01001831]

text: coal mining [ENVO_01001440]

text: forest soil [ENVO_00002261]

text: Czech Republic: Sokolov

text: 50.23 N 12.67 E

text: soil metagenome

text: Pine Young Top 1


text: Young

text: Biology Centre CAS

characteristic: INSDC secondary accession

text: live

text: Sub

text: MIMARKS.survey

characteristic: SRA accession

text: Pine

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: temperate biome [ENVO_01001831]

text: coal mining [ENVO_01001440]

text: forest soil [ENVO_00002261]

text: Czech Republic: Sokolov

text: 50.23 N 12.67 E

text: soil metagenome

text: Pine Young Sub 1


text: Young

text: Biology Centre CAS

text: live

text: Top

text: MIMARKS.survey

text: Pine

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: temperate biome [ENVO_01001831]

text: coal mining [ENVO_01001440]

text: forest soil [ENVO_00002261]

text: Czech Republic: Sokolov

text: 50.23 N 12.67 E

text: soil metagenome

characteristic: organism

text: Pine Young Top 2

characteristic: title


text: Young

characteristic: External Id

text: Biology Centre CAS

text: live

characteristic: INSDC status

text: Sub

text: MIMARKS.survey

text: Pine

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: temperate biome [ENVO_01001831]

text: coal mining [ENVO_01001440]

text: forest soil [ENVO_00002261]

text: Czech Republic: Sokolov

text: 50.23 N 12.67 E

text: soil metagenome

text: Pine Young Sub 2


text: Young

characteristic: Age

text: Biology Centre CAS

text: live

text: Top

text: MIMARKS.survey

characteristic: NCBI submission model

text: Pine

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: temperate biome [ENVO_01001831]

text: coal mining [ENVO_01001440]

text: forest soil [ENVO_00002261]

text: Czech Republic: Sokolov

text: 50.23 N 12.67 E

text: soil metagenome

text: Pine Young Top 3


text: Young

text: Biology Centre CAS

text: live

text: Sub

characteristic: Layer

text: MIMARKS.survey

characteristic: NCBI submission package

text: Pine

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: temperate biome [ENVO_01001831]

text: coal mining [ENVO_01001440]

text: forest soil [ENVO_00002261]

text: Czech Republic: Sokolov

text: 50.23 N 12.67 E

text: soil metagenome

text: Pine Young Sub 3


Bipolaris oryzae strain Bo-1

text: Huazhong Agricultural University

text: live

text: Microbe, viral or environmental

text: China: Daqing Heilongjiang

text: rice

characteristic: host

text: Bipolaris oryzae

text: tissue sample

characteristic: strain

text: Microbe sample from Bipolaris oryzae


text: PulseNet Next Generation Subtyping Methods Unit

text: live

text: Pathogen.cl

text: missing

text: USA

text: missing

text: missing

text: missing

characteristic: isolate

text: missing

text: missing

text: missing

text: Shigella flexneri

text: PulseNet

text: missing

text: missing

characteristic: serovar

text: human

text: Shigella flexneri


characteristic: INSDC center name

text: live

text: Pathogen.cl

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: PulseNet

text: missing

text: missing

text: human

text: Salmonella enterica


characteristic: INSDC first public

text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Campylobacter coli

text: PulseNet

text: missing

text: missing

text: human

text: Campylobacter coli


characteristic: INSDC last update

text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Campylobacter jejuni

text: missing

text: Campylobacter jejuni


text: Max Planck Institute for Infection Biology

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

text: Mali

text: not provided

text: not provided

text: dry blood spot

text: Plasmodium falciparum

text: Amplicon sequencing of P. falciparum DNA from dry-blood spots om filter paper

characteristic: source material identifiers

text: Microbe sample from Plasmodium falciparum


text: Institute of Soil Science and Plant Cultivation

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: Poland: Opatkowice

text: soil, F1, M, 0 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

characteristic: organism

text: F1, M, 0 dpf


characteristic: External Id

text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: soil, F1, A, 0 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F1, A, 0 dpf

characteristic: title


text: live

characteristic: INSDC status

text: Metagenome or environmental

text: Poland: Opatkowice

text: soil, F2, M, 0 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F2, M, 0 dpf


text: live

text: Metagenome or environmental

characteristic: NCBI submission model

text: Poland: Opatkowice

text: soil, F2, A, 0 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F2, A, 0 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: soil, F1, M, 2 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F1, M, 2 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: soil, F1, A, 2 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F1, A, 2 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: soil, F2, M, 2 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F2, M, 2 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: soil, F2, A, 2 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F2, A, 2 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: soil, F1, M, 4 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F1, M, 4 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: soil, F2, M, 4 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F2, M, 4 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: soil, F2, A, 4 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F2, A, 4 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: soil, F1, M, 7 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F1, M, 7 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: soil, F1, A, 7 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F1, A, 7 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: soil, F2, A, 7 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F2, A, 7 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: soil, F1, M, 9 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F1, M, 9 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: soil, F1, A, 9 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F1, A, 9 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: soil, F2, M, 9 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F2, M, 9 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: soil, F1, M, 12 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F1, M, 12 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: soil, F1, A, 12 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F1, A, 12 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: soil, F2, M, 12 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F2, M, 12 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: soil, F2, A, 12 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F2, A, 12 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: soil, F1, M, 14 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F1, M, 14 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: soil, F2, A, 14 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F2, A, 14 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: soil, F3, A, 0 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F3, A, 0 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: soil, F3, M, 0 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F3, M, 0 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: water, F1, W, M, 4 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F1, W, M, 4 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: water, F1, W, A, 4 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F1, W, A, 4 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: water, F2, W, M, 4 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F2, W, M, 4 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: water, F2, W, A, 4 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F2, W, A, 4 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: water, F1, W, M, 7 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F1, W, M, 7 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: water, F1, W, A, 7 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F1, W, A, 7 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: water, F2, W, M, 7 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F2, W, M, 7 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: water, F2, W, A, 7 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F2, W, A, 7 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: water, F1, W, M, 9 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F1, W, M, 9 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: water, F1, W, A, 9 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F1, W, A, 9 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: water, F2, W, M, 9 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F2, W, M, 9 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: water, F2, W, A, 9 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F2, W, A, 9 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: water, F1, W, M, 12 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F1, W, M, 12 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: water, F1, W, A, 12 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F1, W, A, 12 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: water, F2, W, M, 12 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F2, W, M, 12 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: water, F2, W, A, 12 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F2, W, A, 12 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: water, F1, W, M, 14 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F1, W, M, 14 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: water, F1, W, A, 14 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F1, W, A, 14 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: water, F2, W, M, 14 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F2, W, M, 14 dpf


text: live

text: Metagenome or environmental

text: Poland: Opatkowice

text: water, F2, W, A, 14 dpf, V3V4 16S rRNA

text: 51.46 N 21.87 E

text: soil metagenome

text: F2, W, A, 14 dpf


text: Silpakorn University

text: live

text: Viral

text: Thailand: Nakhon Pathom, Muang

text: Bacteriophage

text: drained water

text: Escherichia coli

text: Escherichia phage vB_EcoM-RPB187

text: Viral sample from Escherichia phage vB_EcoM-RPB187


text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Escherichia coli

text: missing

text: Escherichia coli


text: Sichuan Agricultural University

text: live

text: Microbe, viral or environmental

text: China:SiChuan

text: Moschus berezovskii

text: Enterococcus casseliflavus

text: pure culure

text: Microbe sample from Enterococcus casseliflavus


text: Sichuan Agricultural University

text: live

text: Microbe, viral or environmental

text: China:SiChuan

text: Moschus berezovskii

text: Enterococcus casseliflavus

text: pure culure


text: South Dakota Department of Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: South Dakota Public Health Laboratory

text: USA: South Dakota

text: Homo sapiens

text: clinical

text: clinical diagnostics

text: Baseline Surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: South Dakota Department of Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: South Dakota Public Health Laboratory

text: USA: South Dakota

text: Homo sapiens

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: clinical diagnostics

text: Baseline Surveillance


CON121(Mus musculus)

text: Nanjing University of Chinese Medicine

text: live

text: Model organism or animal

text: 6-8 weeks

characteristic: age

text: China:Nanjing

text: Mus musculus

characteristic: replicate

text: male

characteristic: sex

text: the orthotopic transplantation tumour model

characteristic: tissue

text: Model organism or animal sample from Mus musculus


CON122(Mus musculus)

text: Nanjing University of Chinese Medicine

text: live

text: Model organism or animal

characteristic: NCBI submission package

text: 6-8 weeks

text: China:Nanjing

text: Mus musculus

text: male

characteristic: strain


CON123(Mus musculus)

text: Nanjing University of Chinese Medicine

characteristic: INSDC center name

text: live

text: Model organism or animal

text: 6-8 weeks

text: China:Nanjing

text: Mus musculus

text: male


CON124(Mus musculus)

text: Nanjing University of Chinese Medicine

characteristic: INSDC first public

text: live

text: Model organism or animal

text: 6-8 weeks

text: China:Nanjing

text: Mus musculus

text: male


CON129(Mus musculus)

text: Nanjing University of Chinese Medicine

characteristic: INSDC last update

text: live

text: Model organism or animal

text: 6-8 weeks

text: China:Nanjing

text: Mus musculus

text: male


CON130(Mus musculus)

text: Nanjing University of Chinese Medicine

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

text: 6-8 weeks

text: China:Nanjing

text: Mus musculus

text: male


MDL112(Mus musculus)

text: Nanjing University of Chinese Medicine

text: live

text: Model organism or animal

text: 6-8 weeks

text: China:Nanjing

text: Mus musculus

text: male


MDL114(Mus musculus)

text: Nanjing University of Chinese Medicine

text: live

text: Model organism or animal

text: 6-8 weeks

text: China:Nanjing

text: Mus musculus

text: male


MDL115(Mus musculus)

text: Nanjing University of Chinese Medicine

text: live

text: Model organism or animal

text: 6-8 weeks

text: China:Nanjing

text: Mus musculus

text: male


MDL117(Mus musculus)

text: Nanjing University of Chinese Medicine

text: live

text: Model organism or animal

text: 6-8 weeks

text: China:Nanjing

text: Mus musculus

text: male


MDL119(Mus musculus)

text: Nanjing University of Chinese Medicine

text: live

text: Model organism or animal

text: 6-8 weeks

text: China:Nanjing

text: Mus musculus

text: male


MDL120(Mus musculus)

text: Nanjing University of Chinese Medicine

text: live

text: Model organism or animal

text: 6-8 weeks

text: China:Nanjing

text: Mus musculus

text: male


AC132(Mus musculus)

text: Nanjing University of Chinese Medicine

text: live

text: Model organism or animal

text: 6-8 weeks

text: China:Nanjing

text: Mus musculus

text: male


AC133(Mus musculus)

text: Nanjing University of Chinese Medicine

text: live

text: Model organism or animal

text: 6-8 weeks

text: China:Nanjing

text: Mus musculus

text: male


AC134(Mus musculus)

text: Nanjing University of Chinese Medicine

text: live

text: Model organism or animal

text: 6-8 weeks

text: China:Nanjing

text: Mus musculus

text: male


AC135(Mus musculus)

text: Nanjing University of Chinese Medicine

text: live

text: Model organism or animal

text: 6-8 weeks

text: China:Nanjing

text: Mus musculus

text: male


AC136(Mus musculus)

text: Nanjing University of Chinese Medicine

text: live

text: Model organism or animal

text: 6-8 weeks

text: China:Nanjing

text: Mus musculus

text: male


AC137(Mus musculus)

text: Nanjing University of Chinese Medicine

text: live

text: Model organism or animal

text: 6-8 weeks

text: China:Nanjing

text: Mus musculus

text: male


text: Silpakorn University

text: live

text: Viral

text: Thailand: Nakhon Pathom, Muang

text: Bacteriophage

characteristic: isolate

text: drained water

text: Escherichia coli M226

text: Escherichia phage vB_EcoM-RPN226

text: Viral sample from Escherichia phage vB_EcoM-RPN226


text: CT State Public Health Laboratory Submission Group

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

characteristic: host

text: SARS-CoV-2/Human/USA/CT-DPH-1188087001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


characteristic: External Id

text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188088001/2023

text: clinical

characteristic: organism

text: Random sampling

text: Baseline Surveillance


text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188089001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance

characteristic: title


text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188090001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188092001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188153001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188159001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188164001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188165001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188401001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188403001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188404001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188405001/2023

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188406001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: CT State Public Health Laboratory Submission Group

text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188407001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188408001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188412001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188413001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188416001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188417001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188419001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188420001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188421001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188422001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188424001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188425001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: PulseNet Next Generation Subtyping Methods Unit

text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Escherichia coli

characteristic: serovar

text: Escherichia coli


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188146001a/2023

text: clinical

text: Random sampling

text: Baseline Surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188801001/2023

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Random sampling

text: Baseline Surveillance


text: CT State Public Health Laboratory Submission Group

text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188807001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188813001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188816001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188822001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188826001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188827001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188829001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188831001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188838001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188934001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188938001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188941001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188946001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188948001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188952001/2023

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Random sampling

text: Baseline Surveillance


text: CT State Public Health Laboratory Submission Group

text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1188958001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1189259001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1189300001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1189379001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1189382001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1189383001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1189384001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1189386001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1189389001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1189390001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1189513001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1189514001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1189516001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: Hospital de Ninos R. Gutierrez

text: live

text: Human

text: 15 years

characteristic: age

text: Argentina: Ciudad Autonoma de Buenos Aires

characteristic: karyotype

text: Homo sapiens

text: female

characteristic: sex

text: blood

text: Human sample from Homo sapiens


text: PulseNet Next Generation Subtyping Methods Unit

text: live

text: Pathogen.cl

characteristic: NCBI submission package

text: CDC

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: PulseNet

text: Texas Department of State Health Services

text: missing

text: human

characteristic: strain

text: Salmonella enterica


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.cl

text: CDC

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: Shigella flexneri

text: Shigella flexneri


text: Wisconsin State Laboratory of Hygiene

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pasteur ST2

characteristic: MLST#

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: blood

text: Acinetobacter baumannii

text: Whole Organism

text: Microbe sample from Acinetobacter baumannii


text: Wisconsin State Laboratory of Hygiene

text: live

text: Pasteur ST2

text: Microbe, viral or environmental

characteristic: SRA accession

text: USA

text: Homo sapiens

characteristic: host

text: Leg

text: Acinetobacter baumannii

text: Whole Organism


characteristic: External Id

text: CT State Public Health Laboratory Submission Group

text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1189517001/2023

characteristic: isolate

text: clinical

characteristic: organism

text: Random sampling

text: Baseline Surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1189518001/2023

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Random sampling

text: Baseline Surveillance

characteristic: title


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1189523001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1189524001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1189525001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1189667001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1189670001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1189671001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1189672001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1189693001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1189696001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1190067001/2023

text: clinical

text: Random sampling

text: Baseline Surveillance