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text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130288/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130289/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130290/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130291/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130292/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130293/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130294/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130295/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130296/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130297/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130298/2023

text: clinical

text: Baseline surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130299/2023

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130300/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130301/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130302/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130303/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130305/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130306/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130307/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130308/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130309/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130310/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130311/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130312/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130313/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130314/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130315/2023

text: clinical

text: Baseline surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130316/2023

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130317/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130318/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130319/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130320/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130321/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130322/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130323/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130324/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130325/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130326/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130327/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130328/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130329/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130331/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130332/2023

text: clinical

text: Baseline surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130333/2023

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130334/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: TPMG Regional Laboratory

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-500130335/2023

text: clinical

text: Baseline surveillance


tag: Namespace:Sample name

text: United States Department of Agriculture, Food Safety and Inspection Service

text: live

text: Pathogen.env

text: USDA-FSIS

text: USA:GA

text: raw intact chicken

text: missing

text: Campylobacter coli

characteristic: strain

text: Pathogen: environmental/food/other sample from Campylobacter coli


text: live

text: Pathogen.env

text: USDA-FSIS

text: USA:AR

text: chicken - young chicken carcass rinse (post-chill)

text: missing

text: Campylobacter coli


characteristic: ID

text: Tufts University

text: live

text: Model organism or animal

text: not applicable

characteristic: age

text: USA: Massachusetts, Grafton

text: Mus musculus

text: not applicable

characteristic: sex

text: not applicable

text: not applicable

characteristic: tissue


characteristic: External Id

text: Virginia Division of Consolidated Laboratory Services Sequencing Submission Group

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Virginia

text: Homo sapiens

text: Missing

text: human

text: Missing

text: Targeted sequencing


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: Virginia Division of Consolidated Laboratory Services

text: USA: Virginia

text: Homo sapiens

text: Missing

text: human

text: Missing

text: Targeted sequencing


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: USA: Virginia

text: Homo sapiens

text: Missing

text: human

text: Missing

text: Baseline surveillance (random sampling)


text: OSU ATI

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: Paired-End Number

text: Sediment sample that was returned to the lab and remained unamended. OH_Rep1

characteristic: description

text: USA: Ohio

text: not applicable

text: freshwater sediment metagenome

text: 40.783918 N 81.915650 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: Sediment sample that was returned to the lab and remained unamended. OH_Rep2

text: USA: Ohio

text: not applicable

characteristic: host

text: freshwater sediment metagenome

text: 40.783918 N 81.915650 W

text: sediment metagenome

characteristic: organism


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and remained unamended. OH_Rep3

text: USA: Ohio

text: not applicable

text: freshwater sediment metagenome

text: 40.783918 N 81.915650 W

text: sediment metagenome

characteristic: title


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and remained unamended. OH_Rep4

text: USA: Ohio

text: not applicable

text: freshwater sediment metagenome

text: 40.783918 N 81.915650 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and remained unamended. OH_Rep5

text: USA: Ohio

text: not applicable

text: freshwater sediment metagenome

text: 40.783918 N 81.915650 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and amended with NaCl. OH_Rep1

text: USA: Ohio

text: not applicable

text: freshwater sediment metagenome

text: 40.783918 N 81.915650 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and amended with NaCl. OH_Rep2

text: USA: Ohio

text: not applicable

text: freshwater sediment metagenome

text: 40.783918 N 81.915650 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and amended with NaCl. OH_Rep3

text: USA: Ohio

text: not applicable

text: freshwater sediment metagenome

text: 40.783918 N 81.915650 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and amended with NaCl. OH_REP4

text: USA: Ohio

text: not applicable

text: freshwater sediment metagenome

text: 40.783918 N 81.915650 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and amended with NaCl. OH_Rep5

text: USA: Ohio

text: not applicable

text: freshwater sediment metagenome

text: 40.783918 N 81.915650 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and amended with Na2SO4. OH_Rep 1

text: USA: Ohio

text: not applicable

text: freshwater sediment metagenome

text: 40.783918 N 81.915650 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and amended with Na2SO4. OH_Rep2

text: USA: Ohio

text: not applicable

text: freshwater sediment metagenome

text: 40.783918 N 81.915650 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and amended with Na2SO4. OH_Rep3

text: USA: Ohio

text: not applicable

text: freshwater sediment metagenome

text: 40.783918 N 81.915650 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and amended with Na2SO4. OH_Rep4

text: USA: Ohio

text: not applicable

text: freshwater sediment metagenome

text: 40.783918 N 81.915650 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and amended with Na2SO4. OH_Rep5

text: USA: Ohio

text: not applicable

text: freshwater sediment metagenome

text: 40.783918 N 81.915650 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and amended with MgCl2. OH_Rep1

text: USA: Ohio

text: not applicable

text: freshwater sediment metagenome

text: 40.783918 N 81.915650 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and amended with MgCl2. OH_Rep2

text: USA: Ohio

text: not applicable

text: freshwater sediment metagenome

text: 40.783918 N 81.915650 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and amended with MgCl2. OH_Rep3

text: USA: Ohio

text: not applicable

text: freshwater sediment metagenome

text: 40.783918 N 81.915650 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and amended with MgCl2. OH_Rep4

text: USA: Ohio

text: not applicable

text: freshwater sediment metagenome

text: 40.783918 N 81.915650 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and amended with MgCl2. OH_Rep5

text: USA: Ohio

text: not applicable

text: freshwater sediment metagenome

text: 40.783918 N 81.915650 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and amended with MgSO4. OH_Rep1

text: USA: Ohio

text: not applicable

text: freshwater sediment metagenome

text: 40.783918 N 81.915650 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and amended with MgSO4. OH_Rep2

text: USA: Ohio

text: not applicable

text: freshwater sediment metagenome

text: 40.783918 N 81.915650 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and amended with MgSO4. OH_Rep3

text: USA: Ohio

text: not applicable

text: freshwater sediment metagenome

text: 40.783918 N 81.915650 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and amended with MgSO4. OH_Rep4

text: USA: Ohio

text: not applicable

text: freshwater sediment metagenome

text: 40.783918 N 81.915650 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and amended with MgSO4. OH_Rep5

text: USA: Ohio

text: not applicable

text: freshwater sediment metagenome

text: 40.783918 N 81.915650 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and amended with NaCl. NE_Rep 1

text: USA: Nebraska

text: not applicable

text: freshwater sediment metagenome

text: 40.206661 N 99.212060 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and amended with NaCl. NE_Rep2

text: USA: Nebraska

text: not applicable

text: freshwater sediment metagenome

text: 40.206661 N 99.212060 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and amended with NaCl. NE_Rep3

text: USA: Nebraska

text: not applicable

text: freshwater sediment metagenome

text: 40.206661 N 99.212060 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and amended with NaCl. NE_Rep4

text: USA: Nebraska

text: not applicable

text: freshwater sediment metagenome

text: 40.206661 N 99.212060 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and amended with Na2SO4. NE_Rep1

text: USA: Nebraska

text: not applicable

text: freshwater sediment metagenome

text: 40.206661 N 99.212060 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and amended with Na2SO4. NE_Rep2

text: USA: Nebraska

text: not applicable

text: freshwater sediment metagenome

text: 40.206661 N 99.212060 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and amended with Na2SO4. NE_Rep3

text: USA: Nebraska

text: not applicable

text: freshwater sediment metagenome

text: 40.206661 N 99.212060 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and amended with MgCl2. NE_Rep1

text: USA: Nebraska

text: not applicable

text: freshwater sediment metagenome

text: 40.206661 N 99.212060 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and amended with MgCl2. NE_Rep2

text: USA: Nebraska

text: not applicable

text: freshwater sediment metagenome

text: 40.206661 N 99.212060 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and amended with MgCl2. NE_Rep3

text: USA: Nebraska

text: not applicable

text: freshwater sediment metagenome

text: 40.206661 N 99.212060 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and amended with MgCl2. NE_Rep4

text: USA: Nebraska

text: not applicable

text: freshwater sediment metagenome

text: 40.206661 N 99.212060 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and amended with MgSO4. NE_Rep1

text: USA: Nebraska

text: not applicable

text: freshwater sediment metagenome

text: 40.206661 N 99.212060 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and amended with MgSO4. NE_Rep2

text: USA: Nebraska

text: not applicable

text: freshwater sediment metagenome

text: 40.206661 N 99.212060 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and amended with MgSO4. NE_Rep3

text: USA: Nebraska

text: not applicable

text: freshwater sediment metagenome

text: 40.206661 N 99.212060 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and amended with MgSO4. NE_Rep4

text: USA: Nebraska

text: not applicable

text: freshwater sediment metagenome

text: 40.206661 N 99.212060 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and remained unamended. NE_Rep1

text: USA: Nebraska

text: not applicable

text: freshwater sediment metagenome

text: 40.206661 N 99.212060 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and remained unamended. NE_Rep2

text: USA: Nebraska

text: not applicable

text: freshwater sediment metagenome

text: 40.206661 N 99.212060 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and remained unamended. NE_Rep3

text: USA: Nebraska

text: not applicable

text: freshwater sediment metagenome

text: 40.206661 N 99.212060 W

text: sediment metagenome


text: OSU ATI

text: live

text: Metagenome or environmental

text: Sediment sample that was returned to the lab and remained unamended. NE_Rep4

text: USA: Nebraska

text: not applicable

text: freshwater sediment metagenome

text: 40.206661 N 99.212060 W

text: sediment metagenome


text: Virginia Division of Consolidated Laboratory Services Sequencing Submission Group

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Virginia

text: Homo sapiens

text: Missing

characteristic: isolate

text: human

text: Missing

text: Baseline surveillance (random sampling)

characteristic: strain

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: Virginia Division of Consolidated Laboratory Services

text: USA: Virginia

text: Homo sapiens

text: Missing

text: human

text: Missing

text: Severe acute respiratory syndrome coronavirus 2

text: Baseline surveillance (random sampling)


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Virginia

text: Homo sapiens

text: Missing

text: human

text: Missing

text: Targeted sequencing


text: PulseNet Next Generation Subtyping Methods Unit

text: live

text: Pathogen.cl

text: CDC

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: PulseNet

text: Texas Department of State Health Services

text: missing

characteristic: serovar

text: human

text: Salmonella enterica


characteristic: External Id

text: Utah Public Health Laboratory Infectious Disease submission group

text: live

text: Pathogen.cl

text: USA

text: USA:Utah

text: Homo sapiens

text: influenza A

text: not collected

text: not collected

text: Influenza A virus

text: Pathogen: clinical or host-associated sample from Influenza A virus


characteristic: INSDC center name

text: live

text: Pathogen.cl

text: USA

text: USA:Utah

text: Homo sapiens

text: influenza B

text: not collected

text: not collected

text: Influenza B virus

text: B/Victoria

text: Pathogen: clinical or host-associated sample from Influenza B virus


characteristic: INSDC first public

text: live

text: Pathogen.cl

text: CDC

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Escherichia coli

text: missing

text: Escherichia coli


characteristic: INSDC last update

text: live

text: Pathogen.cl

text: CDC

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: Salmonella enterica


name: Vibrio natriegens ATCC 14048 strain with deleted vnps12 prophage regions

text: Binomica Labs

text: live

text: Microbe, viral or environmental

text: Vibrio natriegens ATCC 14048 strain modified with targeted prophage region deletion, per Pfeifer et al., 2019

text: USA

text: salt marsh mud

text: Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759

text: cell culture

text: ATCC 14048

text: Vibrio natriegens ATCC 14048 with prophage region deletion

text: type strain of Beneckea natriegens

characteristic: type-material


text: Greninger

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

text: UW Medicine

text: USA

text: Homo sapiens

text: Not collected

text: Not public

text: 47.6062 N 122.3321 W

text: Human orthorubulavirus 4

text: Pathogen: clinical or host-associated sample from Human orthorubulavirus 4


text: Greninger

text: live

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

text: UW Medicine

text: USA

text: Homo sapiens

text: Not collected

text: Not public

text: 47.6062 N 122.3321 W

text: Human respirovirus 1

text: Pathogen: clinical or host-associated sample from Human respirovirus 1


text: Greninger

text: live

text: Pathogen.cl

text: UW Medicine

text: USA

text: Homo sapiens

text: Not collected

text: Not public

text: 47.6062 N 122.3321 W

text: Human orthorubulavirus 2

text: Pathogen: clinical or host-associated sample from Human orthorubulavirus 2


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: Kaiser Regional-61 Sac Med Cen

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-6000017650/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: Kaiser Regional-61 Sac Med Cen

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-6000017651/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: Kaiser Regional-72 Fresno

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-6000017652/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: Kaiser Regional-63 S. Teresa M

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-6000017653/2023

text: clinical

text: Baseline surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: Kaiser Regional-72 Fresno

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-6000017654/2023

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: Kaiser Regional-67 Vacaville

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-6000017655/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: Kaiser Regional-67 Vacaville

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-6000017656/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: Kaiser Regional-67 Vacaville

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-6000017657/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: Kaiser Regional-39 SanRafael H

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-6000017658/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: Kaiser Regional-39 SanRafael H

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-6000017659/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: Kaiser Regional-39 SanRafael H

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-6000017660/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: Kaiser Regional-72 Fresno

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-6000017662/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: Kaiser Regional-72 Fresno

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-6000017663/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: Kaiser Regional-72 Fresno

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-6000017664/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: Kaiser Regional-12 Richmond

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-6000017665/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: Kaiser Regional-12 Richmond

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-6000017666/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: Kaiser Regional-51 WalnutCreek

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-6000017667/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: Kaiser Regional-51 WalnutCreek

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-6000017668/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: Kaiser Regional-51 WalnutCreek

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-6000017669/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: Kaiser Regional-51 WalnutCreek

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-6000017670/2023

text: clinical

text: Baseline surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: Kaiser Regional-60 S. Sacramen

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-6000017671/2023

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: Kaiser Regional-59 Roseville

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-6000017672/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: Kaiser Regional-60 S. Sacramen

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-6000017673/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: Kaiser Regional-59 Roseville

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-6000017674/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: Kaiser Regional-59 Roseville

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-6000017675/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: Kaiser Regional-92 San Leandro

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-6000017676/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: Kaiser Regional-92 San Leandro

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-6000017677/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: Kaiser Regional-60 S. Sacramen

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-6000017678/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: Kaiser Regional-59 Roseville

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-6000017679/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: Kaiser Regional-59 Roseville

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-6000017680/2023

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: Kaiser Regional-59 Roseville

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-6000017681/2023

text: clinical

text: Baseline surveillance


text: Greninger

text: live

text: Pathogen.cl

text: UW Medicine

text: USA: WA

text: Homo sapiens

text: Not collected

text: Unavailable

text: 47.6062 N 122.3321 W

text: Human adenovirus C108

text: Pathogen: clinical or host-associated sample from Human adenovirus C108


text: Greninger

text: live

text: Pathogen.cl

text: UW Medicine

text: USA: WA

text: Homo sapiens

text: Not collected

text: Unavailable

text: 47.6062 N 122.3321 W

text: Human adenovirus B3

text: Pathogen: clinical or host-associated sample from Human adenovirus B3


text: Greninger

text: live

text: Pathogen.cl

text: UW Medicine

text: USA: WA

text: Homo sapiens

text: Not collected

text: Unavailable

text: 47.6062 N 122.3321 W

text: Human adenovirus 12

text: Pathogen: clinical or host-associated sample from Human adenovirus 12


text: Greninger

text: live

text: Pathogen.cl

text: UW Medicine

text: USA: WA

text: Homo sapiens

text: Not collected

text: Unavailable

text: 47.6062 N 122.3321 W

text: Human adenovirus 2

text: Pathogen: clinical or host-associated sample from Human adenovirus 2


text: Greninger

text: live

text: Pathogen.cl

text: UW Medicine

text: USA: WA

text: Homo sapiens

text: Not collected

text: Unavailable

text: 47.6062 N 122.3321 W

text: Human adenovirus 5

text: Pathogen: clinical or host-associated sample from Human adenovirus 5


text: Greninger

text: live

text: Pathogen.cl

text: UW Medicine

text: USA: WA

text: Homo sapiens

text: Not collected

text: Unavailable

text: 47.6062 N 122.3321 W

text: Human adenovirus 21

text: Pathogen: clinical or host-associated sample from Human adenovirus 21


text: College of Agriculture

text: live

text: Plant

text: seedling stage

characteristic: age

text: not applicable

characteristic: cultivar

text: China:Beijing

text: hexaploid

text: Triticum aestivum

text: leaf of seedling

characteristic: tissue

text: Plant sample from Triticum aestivum


text: College of Agriculture

text: live

text: Plant

characteristic: SRA accession

text: seedling stage

text: not applicable

text: China:Beijing

text: hexaploid

text: Triticum aestivum

characteristic: organism

text: root of seedling

text: Plant sample from Triticum aestivum


text: College of Agriculture

text: live

text: Plant

text: heading stage

text: not applicable

text: China:Beijing

text: hexaploid

characteristic: isolate

text: Triticum aestivum

text: leaf of heading stage

text: Plant sample from Triticum aestivum

characteristic: title


text: College of Agriculture

text: live

text: Plant

text: heading stage

text: not applicable

text: China:Beijing

text: hexaploid

text: Triticum aestivum

text: root of heading stage

text: Plant sample from Triticum aestivum


text: College of Agriculture

text: live

text: Plant

text: heading stage

text: not applicable

text: China:Beijing

text: hexaploid

text: Triticum aestivum

text: stem

text: Plant sample from Triticum aestivum


text: College of Agriculture

text: live

text: Plant

text: heading stage

text: not applicable

text: China:Beijing

text: hexaploid

text: Triticum aestivum

text: stem node

text: Plant sample from Triticum aestivum


text: College of Agriculture

text: live

text: Plant

text: heading stage

text: not applicable

text: China:Beijing

text: hexaploid

text: Triticum aestivum

text: ineffective tiller

text: Plant sample from Triticum aestivum


text: College of Agriculture

text: live

text: Plant

text: heading stage

text: not applicable

text: China:Beijing

text: hexaploid

text: Triticum aestivum

text: ineffective tiller bud

text: Plant sample from Triticum aestivum


text: College of Agriculture

text: live

text: Plant

text: heading stage

text: not applicable

text: China:Beijing

text: hexaploid

text: Triticum aestivum

text: Immature spike (1 cm)

text: Plant sample from Triticum aestivum


text: College of Agriculture

text: live

text: Plant

text: heading stage

text: not applicable

text: China:Beijing

text: hexaploid

text: Triticum aestivum

text: Immature spike (2-3 cm)

text: Plant sample from Triticum aestivum


text: College of Agriculture

text: live

text: Plant

text: maturation stage

text: not applicable

text: China:Beijing

text: hexaploid

text: Triticum aestivum

text: 5 days after powder dispersal

text: Plant sample from Triticum aestivum


text: College of Agriculture

text: live

text: Plant

text: maturation stage

text: not applicable

text: China:Beijing

text: hexaploid

text: Triticum aestivum

text: 15 days after powder dispersal

text: Plant sample from Triticum aestivum


text: Shanghai Ninth People's Hospital

text: live

text: Model organism or animal

text: not applicable

text: not applicable

text: Mus musculus

text: not applicable

characteristic: sex

characteristic: strain

text: tail

text: Model organism or animal sample from Mus musculus

characteristic: treatment


characteristic: External Id

text: Verily Life Sciences LLC

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: SARS-CoV-2: wastewater surveillance

text: Ceres Nanotrap Microbiome A

text: BCoV

text: Thermo Fisher MagMAX Viral/Pathogen Nucleic Acid Isolation kit and Zymo OneStep PCR Inhibitor Removal kit

text: USA: California

text: wastewater

text: wastewater metagenome

text: public health surveillance community-level

text: Verily Life Sciences

text: SARS-CoV-2: wastewater surveillance sample from wastewater metagenome

text: post grit removal

text: wastewater treatment plant

text: composite

text: CA

text: gene copies/L wastewater

text: N gene

text: yes


text: Verily Life Sciences LLC

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: wastewater surveillance

text: Ceres Nanotrap Microbiome A

text: BCoV

text: USA: Virginia

text: wastewater

text: wastewater metagenome

text: Verily Life Sciences

text: post grit removal

text: wastewater treatment plant

text: composite

text: VA

text: gene copies/L wastewater

text: N gene

text: yes


text: Verily Life Sciences LLC

text: live

characteristic: INSDC status

text: SARS-CoV-2: wastewater surveillance

characteristic: NCBI submission model

text: Ceres Nanotrap Microbiome A

text: BCoV

text: USA: Arkansas

text: wastewater

text: wastewater metagenome

text: Verily Life Sciences

text: raw wastewater

text: wastewater treatment plant

text: composite

text: AR

text: gene copies/L wastewater

text: N gene

text: yes


text: Verily Life Sciences LLC

text: live

text: SARS-CoV-2: wastewater surveillance

characteristic: NCBI submission package

text: Ceres Nanotrap Microbiome A

text: BCoV

text: USA: Maine

text: wastewater

text: wastewater metagenome

text: Verily Life Sciences

text: raw wastewater

text: wastewater treatment plant

text: composite

text: ME

text: gene copies/L wastewater

text: N gene

text: yes


text: Verily Life Sciences LLC

text: live

text: SARS-CoV-2: wastewater surveillance

text: Ceres Nanotrap Microbiome A

text: BCoV

text: USA: Maine

text: wastewater

text: wastewater metagenome

text: Verily Life Sciences

text: post grit removal

text: wastewater treatment plant

text: composite

text: ME

text: gene copies/L wastewater

text: N gene

text: yes


text: Verily Life Sciences LLC

text: live

text: SARS-CoV-2: wastewater surveillance

text: Ceres Nanotrap Microbiome A

text: BCoV

text: USA: California

text: wastewater

text: wastewater metagenome

text: Verily Life Sciences

text: raw wastewater

text: wastewater treatment plant

text: composite

text: CA

text: gene copies/L wastewater

text: N gene

text: yes


text: Verily Life Sciences LLC

text: live

text: SARS-CoV-2: wastewater surveillance

text: Ceres Nanotrap Microbiome A

text: BCoV

text: USA: Pennsylvania

text: wastewater

text: wastewater metagenome

text: Verily Life Sciences

text: post grit removal

text: wastewater treatment plant

text: composite

text: PA

text: gene copies/L wastewater

text: N gene

text: yes


text: central sounth university of forestry and technology

text: live

text: Metagenome or environmental

text: China: yueyang

text: missing

characteristic: host

text: forest soil sample

text: 28.31 N 113.51 E

text: soil metagenome

text: Metagenome or environmental sample from soil metagenome


text: live

text: Metagenome or environmental

text: China: yueyang

text: missing

text: forest soil sample

text: 28.32 N 113.51 E

text: soil metagenome


text: live

text: Metagenome or environmental

text: China: yueyang

text: missing

text: forest soil sample

text: 28.33 N 113.51 E

text: soil metagenome


text: live

text: Metagenome or environmental

text: China: yueyang

text: missing

text: forest soil sample

text: 28.34 N 113.51 E

text: soil metagenome


text: live

text: Metagenome or environmental

text: China: yueyang

text: missing

text: forest soil sample

text: 28.35 N 113.51 E

text: soil metagenome


text: live

text: Metagenome or environmental

text: China: yueyang

text: missing

text: forest soil sample

text: 28.36 N 113.51 E

text: soil metagenome


text: live

text: Metagenome or environmental

text: China: yueyang

text: missing

text: forest soil sample

text: 28.37 N 113.51 E

text: soil metagenome


text: live

text: Metagenome or environmental

text: China: yueyang

text: missing

text: forest soil sample

text: 28.31 N 113.52 E

text: soil metagenome


text: live

text: Metagenome or environmental

text: China: yueyang

text: missing

text: forest soil sample

text: 28.31 N 113.53 E

text: soil metagenome


text: live

text: Metagenome or environmental

text: China: yueyang

text: missing

text: forest soil sample

text: 28.31 N 113.54 E

text: soil metagenome


text: live

text: Metagenome or environmental

text: China: yueyang

text: missing

text: forest soil sample

text: 28.31 N 113.55 E

text: soil metagenome


text: live

text: Metagenome or environmental

text: China: yueyang

text: missing

text: forest soil sample

text: 28.31 N 113.56 E

text: soil metagenome


text: live

text: Metagenome or environmental

text: China: yueyang

text: missing

text: 28.31 N 113.51 E

text: soil metagenome

text: soil


text: live

text: Metagenome or environmental

text: China: yueyang

text: missing

text: 28.32 N 113.51 E

text: soil metagenome

text: soil


text: live

text: Metagenome or environmental

text: China: yueyang

text: missing

text: 28.33 N 113.51 E

text: soil metagenome

text: soil


text: live

text: Metagenome or environmental

text: China: yueyang

text: missing

text: 28.34 N 113.51 E

text: soil metagenome

text: soil


text: live

text: Metagenome or environmental

text: China: yueyang

text: missing

text: 28.35 N 113.51 E

text: soil metagenome

text: soil


text: live

text: Metagenome or environmental

text: China: yueyang

text: missing

text: 28.36 N 113.51 E

text: soil metagenome

text: soil


text: live

text: Metagenome or environmental

text: China: yueyang

text: missing

text: 28.37 N 113.51 E

text: soil metagenome

text: soil


text: live

text: Metagenome or environmental

text: China: yueyang

text: missing

text: 28.31 N 113.52 E

text: soil metagenome

text: soil


text: live

text: Metagenome or environmental

text: China: yueyang

text: missing

text: 28.31 N 113.53 E

text: soil metagenome

text: soil


text: live

text: Metagenome or environmental

text: China: yueyang

text: missing

text: 28.31 N 113.54 E

text: soil metagenome

text: soil


text: live

text: Metagenome or environmental

text: China: yueyang

text: missing

text: 28.31 N 113.55 E

text: soil metagenome

text: soil


text: live

text: Metagenome or environmental

text: China: yueyang

text: missing

text: 28.31 N 113.56 E

text: soil metagenome

text: soil


text: Zhejiang University

text: live

text: Model organism or animal

text: 12 weeks

characteristic: age

characteristic: breed

text: China

text: Mus musculus

text: replicate = biological replicate 1

characteristic: replicate

text: male

text: faeces

characteristic: tissue


text: Zhejiang University

text: live

text: Model organism or animal

characteristic: SRA accession

text: 12 weeks

text: China

text: Mus musculus

characteristic: organism

text: replicate = biological replicate 2

text: male

text: faeces

characteristic: title


text: Zhejiang University

text: live

text: Model organism or animal

text: 12 weeks

text: China

text: Mus musculus

text: replicate = biological replicate 3

text: male

characteristic: sex

text: faeces


characteristic: External Id

text: Zhejiang University

text: live

text: Model organism or animal

text: 12 weeks

text: China

text: Mus musculus

text: replicate = biological replicate 4

text: male

text: faeces


text: Zhejiang University

characteristic: INSDC center name

text: live

text: Model organism or animal

text: 12 weeks

text: China

text: Mus musculus

text: replicate = biological replicate 5

text: male

text: faeces


text: Zhejiang University

characteristic: INSDC first public

text: live

text: Model organism or animal

text: 12 weeks

text: China

text: Mus musculus

text: replicate = biological replicate 6

text: male

text: faeces


text: Zhejiang University

characteristic: INSDC last update

text: live

text: Model organism or animal

text: 12 weeks

text: China

text: Mus musculus

text: replicate = biological replicate 7

text: male

text: faeces


text: Zhejiang University

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

text: 12 weeks

text: China

text: Mus musculus

text: replicate = biological replicate 8

text: male

text: faeces


text: Zhejiang University

text: live

characteristic: INSDC status

text: Model organism or animal

text: 12 weeks

text: China

text: Mus musculus

text: replicate = biological replicate 9

text: male

text: faeces


text: Zhejiang University

text: live

text: Model organism or animal

characteristic: NCBI submission model

text: 12 weeks

text: China

text: Mus musculus

text: replicate = biological replicate 10

text: male

text: faeces


text: Zhejiang University

text: live

text: Model organism or animal

characteristic: NCBI submission package

text: 12 weeks

text: China

text: Mus musculus

text: replicate = biological replicate 11

text: male

text: faeces


text: Zhejiang University

text: live

text: Model organism or animal

text: 12 weeks

text: China

text: Mus musculus

text: replicate = biological replicate 12

text: male

text: faeces


text: Zhejiang University

text: live

text: Model organism or animal

text: 12 weeks

text: China

text: Mus musculus

text: replicate = biological replicate 13

text: male

text: faeces


text: Zhejiang University

text: live

text: Model organism or animal

text: 12 weeks

text: China

text: Mus musculus

text: replicate = biological replicate 14

text: male

text: faeces


text: Zhejiang University

text: live

text: Model organism or animal

text: 12 weeks

text: China

text: Mus musculus

text: replicate = biological replicate 15

text: male

text: faeces


text: Zhejiang University

text: live

text: Model organism or animal

text: 12 weeks

text: China

text: Mus musculus

text: replicate = biological replicate 16

text: male

text: faeces


text: Zhejiang University

text: live

text: Model organism or animal

text: 12 weeks

text: China

text: Mus musculus

text: replicate = biological replicate 17

text: male

text: faeces


text: Zhejiang University

text: live

text: Model organism or animal

text: 12 weeks

text: China

text: Mus musculus

text: replicate = biological replicate 18

text: male

text: faeces


text: Zhejiang University

text: live

text: Model organism or animal

text: 12 weeks

text: China

text: Mus musculus

text: replicate = biological replicate 19

text: male

text: faeces


text: Zhejiang University

text: live

text: Model organism or animal

text: 12 weeks

text: China

text: Mus musculus

text: replicate = biological replicate 20

text: male

text: faeces


text: Zhejiang University

text: live

text: Model organism or animal

text: 12 weeks

text: China

text: Mus musculus

text: replicate = biological replicate 21

text: male

text: faeces


text: Zhejiang University

text: live

text: Model organism or animal

text: 12 weeks

text: China

text: Mus musculus

text: replicate = biological replicate 22

text: male

text: faeces


text: Zhejiang University

text: live

text: Model organism or animal

text: 12 weeks

text: China

text: Mus musculus

text: replicate = biological replicate 23

text: male

text: faeces


text: Zhejiang University

text: live

text: Model organism or animal

text: 12 weeks

text: China

text: Mus musculus

text: replicate = biological replicate 24

text: male

text: faeces


Sample1 (July 2021)

text: ICAR-IARI

text: live

text: MIMS.me

characteristic: depth

text: Keywords: GSC:MIxS;MIMS:6.0

characteristic: description

text: not collected

characteristic: elev

text: Soil biome

text: Agricultural soil

text: Fertile soil

text: India: New Delhi

text: not collected

text: metagenome

text: MIMS Environmental/Metagenome sample from metagenome


sample 2 (Sept 2021)

text: ICAR-IARI

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: not collected

text: Soil biome

text: Agricultural soil

text: Fertile soil

text: India: New Delhi

text: not collected

text: metagenome


sample 3 (Dec 2021)

text: ICAR-IARI

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: not collected

text: Soil biome

text: Agricultural soil

text: Fertile soil

text: India: New Delhi

text: not collected

text: metagenome


sample 4 (March 2022)

text: ICAR-IARI

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: not collected

text: Soil biome

text: Agricultural soil

text: Fertile soil

text: India: New Delhi

text: not collected

text: metagenome


text: AB PRISMA

text: live

text: One Health Enteric

text: Household

text: AB PRISMA, Iquitos Peru

text: Peru:Loreto

text: Gallus gallus domesticus

characteristic: host

text: fecal stool

text: 3.80 S 73.34 W

text: Campylobacter jejuni

text: Epidemiology and impact of emerging Campylobacter species isolated from humans and animals in Loreto Department Peru: Genome sequencing and assembly

text: Genomic characterization of Campylobacter species in LMIC setting

text: USDA ARS PSMRU

text: animal

characteristic: strain

text: LMIC human fecal stool sample CAM004899-028831, whole-genome shotgun sequencing


text: AB PRISMA

text: live

text: One Health Enteric

characteristic: SRA accession

text: AB PRISMA, Iquitos Peru

text: Peru:Loreto

text: Homo sapiens

text: fecal stool

text: 3.80 S 73.34 W

text: Campylobacter jejuni

text: USDA ARS PSMRU

text: human

text: LMIC human fecal stool sample CAM004943-029126, whole-genome shotgun sequencing


text: AB PRISMA

text: live

text: One Health Enteric

text: AB PRISMA, Iquitos Peru

text: Peru:Loreto

text: Homo sapiens

text: fecal stool

text: 3.80 S 73.34 W

text: Campylobacter jejuni

characteristic: organism

text: USDA ARS PSMRU

text: human

text: LMIC human fecal stool sample CAM005028-029134, whole-genome shotgun sequencing


text: AB PRISMA

text: live

text: One Health Enteric

text: AB PRISMA, Iquitos Peru

text: Peru:Loreto

text: Homo sapiens

text: fecal stool

text: 3.80 S 73.34 W

text: Campylobacter jejuni

text: USDA ARS PSMRU

text: human

text: LMIC human fecal stool sample CAM005034-029145, whole-genome shotgun sequencing

characteristic: title


text: AB PRISMA

text: live

text: One Health Enteric

text: AB PRISMA, Iquitos Peru

text: Peru:Loreto

text: Homo sapiens

text: fecal stool

text: 3.80 S 73.34 W

text: Campylobacter coli

text: USDA ARS PSMRU

text: human

text: LMIC human fecal stool sample CAM005120-029798, whole-genome shotgun sequencing


text: AB PRISMA

text: live

text: One Health Enteric

text: AB PRISMA, Iquitos Peru

text: Peru:Loreto

text: Homo sapiens

text: fecal stool

text: 3.80 S 73.34 W

text: Campylobacter jejuni

text: USDA ARS PSMRU

text: human

text: LMIC human fecal stool sample CAM005187-030670, whole-genome shotgun sequencing


text: AB PRISMA

text: live

text: One Health Enteric

text: AB PRISMA, Iquitos Peru

text: Peru:Loreto

text: Homo sapiens

text: fecal stool

text: 3.80 S 73.34 W

text: Campylobacter jejuni

text: USDA ARS PSMRU

text: human

text: LMIC chicken fecal stool sample CAM005196-030680, whole-genome shotgun sequencing


text: AB PRISMA

text: live

text: One Health Enteric

text: AB PRISMA, Iquitos Peru

text: Peru:Loreto

text: Homo sapiens

text: fecal stool

text: 3.80 S 73.34 W

text: Campylobacter jejuni

text: USDA ARS PSMRU

text: human

text: LMIC human fecal stool sample CAM005222-030684, whole-genome shotgun sequencing


text: AB PRISMA

text: live

text: One Health Enteric

text: AB PRISMA, Iquitos Peru

text: Peru:Loreto

text: Homo sapiens

text: fecal stool

text: 3.80 S 73.34 W

text: Campylobacter jejuni

text: USDA ARS PSMRU

text: human

text: LMIC human fecal stool sample CAM005232-030694, whole-genome shotgun sequencing


text: AB PRISMA

text: live

text: One Health Enteric

text: AB PRISMA, Iquitos Peru

text: Peru:Loreto

text: Homo sapiens

text: fecal stool

text: 3.80 S 73.34 W

text: Campylobacter coli

text: USDA ARS PSMRU

text: human

text: LMIC human fecal stool sample CAM005243-030703, whole-genome shotgun sequencing


text: AB PRISMA

text: live

text: One Health Enteric

text: AB PRISMA, Iquitos Peru

text: Peru:Loreto

text: Homo sapiens

text: fecal stool

text: 3.80 S 73.34 W

text: Campylobacter jejuni

text: USDA ARS PSMRU

text: human

text: LMIC human fecal stool sample CAM005277-030718, whole-genome shotgun sequencing


text: AB PRISMA

text: live

text: One Health Enteric

text: AB PRISMA, Iquitos Peru

text: Peru:Loreto

text: Homo sapiens

text: fecal stool

text: 3.80 S 73.34 W

text: Campylobacter jejuni

text: USDA ARS PSMRU

text: human

text: LMIC human fecal stool sample CAM005303-030727, whole-genome shotgun sequencing


text: Jinhua Central Hospital

text: live

text: Human

characteristic: age

text: Zhu dan

text: China:Zhejiang

characteristic: isolate

text: Homo sapiens

text: female

characteristic: sex

text: Alveolar lavage fluid

characteristic: tissue

text: mNGS seq of S1


characteristic: External Id

text: Jinhua Central Hospital

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: female

text: Alveolar lavage fluid

text: mNGS seq of S2


text: Jinhua Central Hospital

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Human

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: female

text: Alveolar lavage fluid

text: mNGS seq of S3


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: female

text: Alveolar lavage fluid

text: mNGS seq of S4


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: female

text: Alveolar lavage fluid

text: mNGS seq of S5


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: male

text: Alveolar lavage fluid

text: mNGS seq of S6


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: male

text: Alveolar lavage fluid

text: mNGS seq of S7


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: male

text: Alveolar lavage fluid

text: mNGS seq of S8


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: male

text: Alveolar lavage fluid

text: mNGS seq of S9


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: male

text: Alveolar lavage fluid

text: mNGS seq of S10


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: female

text: Alveolar lavage fluid

text: mNGS seq of S11


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: male

text: Blood and alveolar lavage fluid

text: mNGS seq of S12


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: female

text: Alveolar lavage fluid

text: mNGS seq of S13


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: female

text: Alveolar lavage fluid

text: mNGS seq of S14


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: female

text: Blood

text: mNGS seq of S15


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: male

text: Alveolar lavage fluid

text: mNGS seq of S16


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: male

text: Alveolar lavage fluid

text: mNGS seq of S17


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: female

text: Alveolar lavage fluid

text: mNGS seq of S18


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: male

text: Alveolar lavage fluid

text: mNGS seq of S19


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: male

text: Alveolar lavage fluid

text: mNGS seq of S20


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: female

text: Blood

text: mNGS seq of S21


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: male

text: Blood

text: mNGS seq of S22


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: male

text: Blood

text: mNGS seq of S23


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: female

text: Blood

text: mNGS seq of S24


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: male

text: Alveolar lavage fluid

text: mNGS seq of S25


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: female

text: Alveolar lavage fluid

text: mNGS seq of S26.1


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: female

text: Alveolar lavage fluid

text: mNGS seq of S26.2


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: male

text: Alveolar lavage fluid

text: mNGS seq of S27


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: male

text: Alveolar lavage fluid

text: mNGS seq of S28


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: female

text: Blood

text: mNGS seq of S29


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: female

text: Alveolar lavage fluid

text: mNGS seq of S30


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: male

text: Alveolar lavage fluid

text: mNGS seq of S31.1


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: male

text: Alveolar lavage fluid

text: mNGS seq of S31.2


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: female

text: Alveolar lavage fluid

text: mNGS seq of S32


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: male

text: Alveolar lavage fluid

text: mNGS seq of S33.1


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: male

text: Alveolar lavage fluid

text: mNGS seq of S33.2


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: male

text: Alveolar lavage fluid

text: mNGS seq of S34.1


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: male

text: Alveolar lavage fluid

text: mNGS seq of S34.2


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: male

text: Alveolar lavage fluid

text: mNGS seq of S35


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: female

text: Alveolar lavage fluid

text: mNGS seq of S36


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: male

text: Alveolar lavage fluid

text: mNGS seq of S37.1


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: male

text: Alveolar lavage fluid

text: mNGS seq of S37.2


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: male

text: Alveolar lavage fluid

text: mNGS seq of S38


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: male

text: Alveolar lavage fluid

text: mNGS seq of S39


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: male

text: Blood

text: mNGS seq of S40.1


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: male

text: Blood

text: mNGS seq of S40.2


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: male

text: Alveolar lavage fluid

text: mNGS seq of S41


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: male

text: Alveolar lavage fluid

text: mNGS seq of S42


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: female

text: Alveolar lavage fluid

text: mNGS seq of S43


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: female

text: Alveolar lavage fluid

text: mNGS seq of S44


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: female

text: Alveolar lavage fluid

text: mNGS seq of S45


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: male

text: Blood

text: mNGS seq of S46.1


text: Jinhua Central Hospital

text: live

text: Human

text: Zhu dan

text: China:Zhejiang

text: Homo sapiens

text: male

text: Blood

text: mNGS seq of S46.2


text: Shanghai Tenth People's Hospital, Tongji University School of Medicine

text: live

text: Metagenome or environmental

text: missing

text: China:Shanghai

text: Homo sapiens

characteristic: host

text: bronchoalveolar lavage fluid

text: missing

text: human metagenome

characteristic: replicate

text: Higher diagnostic value of metagenomic next-generation sequencing in acute infection than chronic infection: a multicenter retrospective study:2098331081117


text: live

text: Metagenome or environmental

characteristic: SRA accession

text: missing

text: China:Shanghai

text: Homo sapiens

text: bronchoalveolar lavage fluid

text: missing

text: human metagenome

text: Higher diagnostic value of metagenomic next-generation sequencing in acute infection than chronic infection: a multicenter retrospective study:2098331081124


text: live

text: Metagenome or environmental

text: missing

text: China:Shanghai

text: Homo sapiens

text: bronchoalveolar lavage fluid

text: missing

text: human metagenome

characteristic: organism

text: Higher diagnostic value of metagenomic next-generation sequencing in acute infection than chronic infection: a multicenter retrospective study:2098331081162


text: live

text: Metagenome or environmental

text: missing

text: China:Shanghai

text: Homo sapiens

text: bronchoalveolar lavage fluid

text: missing

text: human metagenome

text: Higher diagnostic value of metagenomic next-generation sequencing in acute infection than chronic infection: a multicenter retrospective study:2098331084019

characteristic: title