characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: y

text: UBERON:body

text: UBERON:multi-tissue structure

text: UBERON:multi-tissue structure

text: organismal metagenome

text: sample taken from body of tick AaN_47R3

text: sample taken from body of tick AaN_47R3

text: ENVO:organism-associated habitat

text: ENVO:organism-associated habitat

characteristic: env feature

text: ENVO:organic material feature

characteristic: env matter

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: deer tick

characteristic: host common name

text: Ixodes scapularis

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

text: nymph

characteristic: life stage

text: organismal metagenomes

text: n

characteristic: public

text: run 3

characteristic: run

text: single tick

characteristic: sample id

characteristic: sample name

text: organismal metagenomes

text: NY_CT deer ticks

characteristic: site

characteristic: taxon id


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:body

characteristic: body habitat

text: UBERON:multi-tissue structure

characteristic: body product

text: UBERON:multi-tissue structure

characteristic: body site

characteristic: collection date

text: organismal metagenome

characteristic: common name

characteristic: depth

text: sample taken from body of tick AaM_21R2

characteristic: description

text: sample taken from body of tick AaM_21R2

characteristic: elevation

text: ENVO:organism-associated habitat

characteristic: env biome

text: ENVO:organism-associated habitat

text: ENVO:organic material feature

text: GAZ:United States of America

text: deer tick

text: Ixodes scapularis

characteristic: latitude

text: adult

characteristic: longitude

text: organismal metagenomes

characteristic: organism

text: n

text: run 2

text: single tick

text: organismal metagenomes

characteristic: sex

text: NC deer ticks

characteristic: title

type: has member


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: y

text: UBERON:body

text: UBERON:multi-tissue structure

text: UBERON:multi-tissue structure

text: organismal metagenome

text: sample taken from body of tick AaM_21R1

text: sample taken from body of tick AaM_21R1

text: ENVO:organism-associated habitat

text: ENVO:organism-associated habitat

characteristic: env feature

text: ENVO:organic material feature

characteristic: env matter

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: deer tick

characteristic: host common name

text: Ixodes scapularis

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

text: adult

characteristic: life stage

text: organismal metagenomes

text: n

characteristic: public

text: run 1

characteristic: run

text: single tick

characteristic: sample id

characteristic: sample name

text: organismal metagenomes

text: NY_CT deer ticks

characteristic: site

characteristic: taxon id


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:body

characteristic: body habitat

text: UBERON:multi-tissue structure

characteristic: body product

text: UBERON:multi-tissue structure

characteristic: body site

characteristic: collection date

text: organismal metagenome

characteristic: common name

characteristic: depth

text: sample taken from body of tick AaF_06R2

characteristic: description

text: sample taken from body of tick AaF_06R2

characteristic: elevation

text: ENVO:organism-associated habitat

characteristic: env biome

text: ENVO:organism-associated habitat

text: ENVO:organic material feature

text: GAZ:United States of America

text: deer tick

text: Ixodes scapularis

characteristic: latitude

text: adult

characteristic: longitude

text: organismal metagenomes

characteristic: organism

text: n

text: run 2

text: single tick

text: organismal metagenomes

characteristic: sex

text: NC deer ticks

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: y

text: UBERON:body

text: UBERON:multi-tissue structure

text: UBERON:multi-tissue structure

text: organismal metagenome

text: sample taken from body of tick AaM_22R1

text: sample taken from body of tick AaM_22R1

text: ENVO:organism-associated habitat

text: ENVO:organism-associated habitat

characteristic: env feature

text: ENVO:organic material feature

characteristic: env matter

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: deer tick

characteristic: host common name

text: Ixodes scapularis

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

text: adult

characteristic: life stage

text: organismal metagenomes

text: n

characteristic: public

text: run 1

characteristic: run

text: single tick

characteristic: sample id

characteristic: sample name

text: organismal metagenomes

text: NY_CT deer ticks

characteristic: site

characteristic: taxon id


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:body

characteristic: body habitat

text: UBERON:multi-tissue structure

characteristic: body product

text: UBERON:multi-tissue structure

characteristic: body site

characteristic: collection date

text: organismal metagenome

characteristic: common name

characteristic: depth

text: sample taken from body of tick AaM_20R2

characteristic: description

text: sample taken from body of tick AaM_20R2

characteristic: elevation

text: ENVO:organism-associated habitat

characteristic: env biome

text: ENVO:organism-associated habitat

text: ENVO:organic material feature

text: GAZ:United States of America

text: deer tick

text: Ixodes scapularis

characteristic: latitude

text: adult

characteristic: longitude

text: organismal metagenomes

characteristic: organism

text: n

text: run 2

text: single tick

text: organismal metagenomes

characteristic: sex

text: NC deer ticks

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: y

text: UBERON:body

text: UBERON:multi-tissue structure

text: UBERON:multi-tissue structure

text: organismal metagenome

text: sample taken from body of tick AaM_23R3

text: sample taken from body of tick AaM_23R3

text: ENVO:organism-associated habitat

text: ENVO:organism-associated habitat

characteristic: env feature

text: ENVO:organic material feature

characteristic: env matter

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: deer tick

characteristic: host common name

text: Ixodes scapularis

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

text: adult

characteristic: life stage

text: organismal metagenomes

text: n

characteristic: public

text: run 3

characteristic: run

text: single tick

characteristic: sample id

characteristic: sample name

text: organismal metagenomes

text: NY_CT deer ticks

characteristic: site

characteristic: taxon id


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:body

characteristic: body habitat

text: UBERON:multi-tissue structure

characteristic: body product

text: UBERON:multi-tissue structure

characteristic: body site

characteristic: collection date

text: organismal metagenome

characteristic: common name

characteristic: depth

text: sample taken from body of tick AaN_48R3

characteristic: description

text: sample taken from body of tick AaN_48R3

characteristic: elevation

text: ENVO:organism-associated habitat

characteristic: env biome

text: ENVO:organism-associated habitat

text: ENVO:organic material feature

text: GAZ:United States of America

text: deer tick

text: Ixodes scapularis

text: nymph

text: organismal metagenomes

characteristic: organism

text: n

text: run 3

text: single tick

text: organismal metagenomes

text: NY_CT deer ticks

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: y

text: UBERON:body

text: UBERON:multi-tissue structure

text: UBERON:multi-tissue structure

text: organismal metagenome

text: sample taken from body of tick AaF_03R1

text: sample taken from body of tick AaF_03R1

text: ENVO:organism-associated habitat

text: ENVO:organism-associated habitat

characteristic: env feature

text: ENVO:organic material feature

characteristic: env matter

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: deer tick

characteristic: host common name

text: Ixodes scapularis

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

text: adult

characteristic: life stage

text: organismal metagenomes

text: n

characteristic: public

text: run 1

characteristic: run

text: single tick

characteristic: sample id

characteristic: sample name

text: organismal metagenomes

characteristic: sex

text: NY_CT deer ticks

characteristic: site

characteristic: taxon id


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:body

characteristic: body habitat

text: UBERON:multi-tissue structure

characteristic: body product

text: UBERON:multi-tissue structure

characteristic: body site

characteristic: collection date

text: organismal metagenome

characteristic: common name

characteristic: depth

text: sample taken from body of tick AaM_21R3

characteristic: description

text: sample taken from body of tick AaM_21R3

characteristic: elevation

text: ENVO:organism-associated habitat

characteristic: env biome

text: ENVO:organism-associated habitat

text: ENVO:organic material feature

text: GAZ:United States of America

text: deer tick

text: Ixodes scapularis

text: adult

text: organismal metagenomes

characteristic: organism

text: n

text: run 3

text: single tick

text: organismal metagenomes

text: NY_CT deer ticks

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: y

text: UBERON:body

text: UBERON:multi-tissue structure

text: UBERON:multi-tissue structure

text: organismal metagenome

text: sample taken from body of tick AaN_49R3

text: sample taken from body of tick AaN_49R3

text: ENVO:organism-associated habitat

text: ENVO:organism-associated habitat

characteristic: env feature

text: ENVO:organic material feature

characteristic: env matter

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: deer tick

characteristic: host common name

text: Ixodes scapularis

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

text: nymph

characteristic: life stage

text: organismal metagenomes

text: n

characteristic: public

text: run 3

characteristic: run

text: single tick

characteristic: sample id

characteristic: sample name

text: organismal metagenomes

text: NY_CT deer ticks

characteristic: site

characteristic: taxon id


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:body

characteristic: body habitat

text: UBERON:multi-tissue structure

characteristic: body product

text: UBERON:multi-tissue structure

characteristic: body site

characteristic: collection date

text: organismal metagenome

characteristic: common name

characteristic: depth

text: sample taken from body of tick AaN_45R1

characteristic: description

text: sample taken from body of tick AaN_45R1

characteristic: elevation

text: ENVO:organism-associated habitat

characteristic: env biome

text: ENVO:organism-associated habitat

text: ENVO:organic material feature

text: GAZ:United States of America

text: deer tick

text: Ixodes scapularis

text: nymph

text: organismal metagenomes

characteristic: organism

text: n

text: run 1

text: single tick

text: organismal metagenomes

text: NY_CT deer ticks

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institute of Microbiology, ETH Zurich

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:Institute of Microbiology, ETH Zurich

characteristic: Submitter Id

text: 168 hour

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Protocols: The dikaryon self-compatible C. cinerea strain A43mutB43mut (AB) was grown on YMG plates (0.4% yeast extract, 1% malt extract, 50 mM glucose and 1.5% agar) at 37C in the dark for 96h and transferred for fruiting body production at 25C, 90% humidity and 12 h light/dark cycles. One to two mm AB stage 1 primordia (ABS1P) were harvested after 72 h, flash-frozen in liquid Nitrogen and stored at -80C. C. cinerea AB vegetative mycelia (ABVM) were grown in duplicate on YMG plates covered with cellophane discs for 96 h at 37C in the dark and harvested independently before being flash frozen and stored at -80C. To study the impact of the mating type locus leading to homothallism on the transcription profile of C. cinerea, A43mutB43mut and Okayama7 mycelia (ABVM24C and O7VM24C) were grown in triplicate on YMG plates covered with cellophane discs at 37C in the dark for 96 h and 120 h, respectively, and transferred to 24C for 72 h in the dark. Mycelia were harvested, flash frozen and stored at -80C. Primordia and mycelia were lyophilized and ABS1Ps were separated in two pools of 20 mg each. From each ABVM replicate, O7VM replicate or ABS1P pool, 20 mg dry material were lysed in three FastPrep FP120 homogenization steps of 45 s at 4.5, 5.5 and 6.5 m/s in the presence of 250 mg 0.5 mm glass beads, cooling the samples for 5 min on ice between steps. RNA was extracted using 1 mL Qiazol (Qiagen) and 0.2 mL chloroform ReagentPlus (Sigma-Aldrich). The solution was centrifuged at 12000 xg for 15 min at 4C; thereafter, RNA from the resultant aqueous phase was washed on-column using the RNeasy Lipid Tissue Mini Kit (Qiagen) and eluted in 60 uL RNase-free water. Concentration and integrity of the purified RNA were determined with a Qubit (1.0) fluorometer (Life Technologies) and a Bioanalyzer 2100 (Agilent), respectively. Samples with a 260/280 nm ratio of 1.8-2.1 and a 28S/18S ratio of 1.5-2 were later used in library construction. Whole transcriptome libraries from two ABS1P pools and two ABVM replicates were produced using MicroPolyA Purist Kit (Ambion) and SOLiD Total RNA-Seq kit (Applied Biosystems). Briefly, approximately 200 ng/sample poly(A)-positive RNA were enriched using MicroPoly(A) Purist Kit from 15-20 ug total RNA. Quality and concentration of the extracted poly(A)-positive RNA were re-assessed as described above, and poly(A)-positive RNA was digested with RNase III. Ligation of the adaptor mix and reverse transcription were performed following the manufacturer instructions. cDNA libraries were size selected for 150-250 bp fragments, amplified in 15-18 PCR cycles using barcoded adaptor primers and purified with PureLink PCR micro kit (Invitrogen). These barcoded cDNA libraries were then amplified by emulsion PCR from 0.5 pM template.

text: Stage 1 primordia

characteristic: developmental stage

text: Coprinopsis cinerea

text: Coprinopsis cinerea

text: Stage 1 primordia

characteristic: organism part

text: Coprinopsis cinerea

text: frozen specimen

characteristic: specimen with known storage state


text: Institute of Microbiology, ETH Zurich

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 96 hour

text: ArrayExpress

characteristic: description

text: Vegetative Mycelium

text: Coprinopsis cinerea

text: Coprinopsis cinerea

text: Vegetative Mycelium

text: Coprinopsis cinerea

text: frozen specimen


text: TGAC

text: public

text: Sputum from cystic fibrosis patients

text: human lung metagenome

characteristic: organism

text: human lung metagenome

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

tag: Namespace:Institute for Molecular Biosciences, Biocenter

text: 12 day

text: ArrayExpress

text: Protocols: For all experiments, three independent monokaryotic spore isolates (mating type minus) of the wild-type strain 's' (Rizet 1953, CR Acad Sci Paris 237: 838-855) were used. Cultivation was essentially performed as described previously (Rexroth et al. 2012 Biochim Biophys Acta 1817: 381-387). Briefly, solid PASM medium (Brust et al. 2010 Curr Genet 55: 225-235), overlaid with a cellophane sheet, was inoculated with small pieces of mycelium derived from a culture of a freshly germinated ascospore. To obtain enough biomass for RNA isolation, after 2 days of incubation under permanent light at 27 degree C the mycelium was transferred to liquid CM medium (Borghouts et al. 2000 Curr Genet 37: 268-275) and incubated at 27 degree C for two days under light and agitation (age in total: 6 days). To obtain different age stages (9, 10, 11, 12, 13, and 14 d, respectively), the cultures were pre-grown to e.g. the age of 5 days for the 9 days sample on solid medium. Small pieces of mycelium from the growth front were transferred to fresh PASM plates overlaid with a cellophane sheet, and incubated under permanent light at 27 degree C for two days. Subsequently, the mycelium was transferred to liquid medium and again cultured for 2 days in liquid medium (permanent light, shaking, 27 degree C). To be sure that all three isolates have a similar aging behaviour, the lifespan as period of linear growth on solid PASM medium was recorded. All isolates had a lifespan of 14 days, thus the oldest age stage (14 days) represents a senescent culture. Total RNA was isolated using a CsCl density gradient as described in Servos et al. 2012 PLoS ONE 7: e49292. SuperSAGE analysis was performed by GenXPro as described in Molina et al. 2008 BMC Genomics 9: 553. Additionally to the anchoring enzyme NlaIII (CATG), DpnII (GATC) had been used.

text: wild type

characteristic: genotype

text: Podospora anserina

text: Podospora anserina

text: mycelium

text: Podospora anserina

text: mating type minus

characteristic: sex

text: fresh

text: 's'

characteristic: strain


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institute for Molecular Biosciences, Biocenter

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: 10 day

text: ArrayExpress

text: wild type

text: Podospora anserina

text: Podospora anserina

text: mycelium

text: Podospora anserina

text: mating type minus

text: fresh

text: 's'


text: public

text: 9 day

characteristic: age

text: ArrayExpress

characteristic: broker name

text: wild type

text: Podospora anserina

text: Podospora anserina

text: mycelium

characteristic: organism part

text: Podospora anserina

text: mating type minus

text: fresh

characteristic: specimen with known storage state

text: 's'


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 13 day

text: ArrayExpress

characteristic: description

text: wild type

text: Podospora anserina

text: Podospora anserina

text: mycelium

text: Podospora anserina

text: mating type minus

text: fresh

text: 's'


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: 6 day

text: ArrayExpress

text: wild type

text: Podospora anserina

characteristic: organism

text: Podospora anserina

text: mycelium

text: Podospora anserina

text: mating type minus

text: fresh

text: 's'

characteristic: title


characteristic: ENA-LAST-UPDATE

text: public

text: 14 day

text: ArrayExpress

text: wild type

characteristic: genotype

text: Podospora anserina

text: Podospora anserina

text: mycelium

text: Podospora anserina

text: mating type minus

characteristic: sex

text: fresh

text: 's'

characteristic: strain


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: 11 day

text: ArrayExpress

text: wild type

text: Podospora anserina

text: Podospora anserina

text: mycelium

text: Podospora anserina

text: mating type minus

text: fresh

text: 's'


text: Federal University of Para

text: public

tag: Namespace:Federal University of Para

text: ArrayExpress

characteristic: broker name

text: Protocols: Corynebacterium pseudotuberculosis strain 1002, isolated from a caprine host in Brazil, was maintained in brain-heart-infusion broth (BHI HiMedia Laboratories Pvt. Ltda, India) at 37C, under rotation. Then, the bacteria was added to 20mL of BHI-Broth with 0.05% of 80% Tween and was maintained at 37C overnight, under rotation. The sample was then diluted 1/100 in 100mL of BHI broth, maintained at 37C, under rotation, and it was monitored until it reached the beginning of the exponential fase (A600 = 0.2). Afterwards, the sample was equally splitted in 4 aliquots of 20mL, centrifuged for 3 minutes under 8000rpm at 37C, and the pellets were re-suspendend in different medias according to the following conditions: acid stress, with HCl (fitting the pH to 5); osmotic stress, with 2M of NaCl; heat shock, where the pellet was re-suspended in pre-heated BHI (50C); and control, where the pellet was re-suspended in BHI under physiologic condition. Then, the samples for the acid stress, osmotic stress and control condition were maintained at 37C for 15 minutes, under rotation, whereas the sample under heat shock condition was maintained at 50C. Next, the samples were serially diluted from 10e-1 to 10e-6, where the samples from 10e-4 to 10e-6 were spread in BHI with agar (1.5%), which was maintained at 37C for 48hs for colony counting (duplicated samples); and the broth was centrifuged at 37C for 3 minutes under 8000rpm and the final pellet was re-suspended in 2mL of RNAlater, following the protocol of the manufacturer. Briefly, the bacteria suspended in RNAlater buffer were subjected to total RNA extraction using the ChargeSwitch total RNA cell kit (Invitrogen, USA) in accordance with the manufacturers recommendations, including the following adaptations: after the addition of the lysis buffer (Invitrogen), the material was transferred to 2mL tubes partially filled with 1mm diameter glass microbeads (Bertin Technologies). The cells were lysed mechanically using a Prescellys 24 homogenizer, set at 6,500 rpm, for 2 cycles (15 seconds per cycle) with an interval of 30 seconds between the cycles. The samples were centrifuged for 1 minute, and the supernatant transferred to fresh 2ml tubes and incubated in a dry bath at 60C for 15 minutes (representing the complete original protocol). DNAse was added to eliminate the residual genomic DNA. The elution of the total RNA from the magnetic beads was performed using 100 uL of milli-Q RNase-free water. The amount of total RNA was assessed using a Qubit 2.0 fluorometer (Invitrogen). In order to construct the library, the SOLiD Total RNA-Seq Kit was used. Briefly, after removing rRNAs, approximately 245ng of RNA was fragmented with RNAIII through incubation in a MJ Research thermocicler at 37C for 10 min and the reaction was interrupted with the addition of 90uL of nuclease-free water. The RNA was, then, concentrated through precipitation with ethanol according to the RiboMinus Concentration Module (Invitrogen - EUA), for subsequent hybridization with adapters and amplification of the cDNA library, which was obtained through reverse transcription using P1 adapters linked to the RNA extremities, according to the protocol SOLiD Total RNA-Seq Kit (Life Technologie, EUA). Next, the cDNA was denatured in polyacrylamide gel electrophoresis (6%) for obtaining fragments in the range from 150 to 250 base pairs for PCR amplification. The PCR amplifications were carried out in a MJ Research thermocycler as follow: the mixture was denatured at 95C for 30 sec, followed by 15 cycles of amplification at 95C for 30 sec, 62C for 30 sec and 72C for 30 sec, with a final extension of 72C for 7 min. Finally, the amplicons were purified using the kit PureLinkTM PCR Micro (Invitrogen - EUA), quantified in Qubit 2.0 Fluorometer-Invitrogen (EUA) and assessed through agarose electrophoresis 2%.

text: wild type genotype

text: Corynebacterium pseudotuberculosis

text: Corynebacterium pseudotuberculosis

text: Corynebacterium pseudotuberculosis

text: frozen specimen

characteristic: specimen with known storage state

text: Abscesses


text: CAUK

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: This population was derived by experimental evolution of Escherichia coli K-12 strain MYMC4100 (Schulenburg lab, Kiel, Germany). It was cultivated in the well of a 384-well microtiter plate in M9 minimal medium containing 9 µg/ml erythromycin. The population was propagated for five days with daily transfer into a new plate with fresh medium and fresh antibiotic(s) concentrations.

text: Escherichia coli K-12

text: Escherichia coli K-12

characteristic: sub strain

text: Escherichia coli K-12 strain MYMC4100 evolved for five days with 9 µg/ml erythromycin in M9 minimal medium.


characteristic: ENA-CHECKLIST

text: Institute of Microbiology, ETH Zurich

text: public

characteristic: SRA accession

text: ArrayExpress

text: Protocols: To study the impact of the mating type locus on the transcriptional profile of C. cinerea, A43mutB43mut and Okayama7 mycelia (ABVM24 and O7VM24) were grown in triplicate on YMG plates covered with cellophane discs at 37C in the dark for 96 h and 120 h, respectively, and transferred to 24C for 72 h in the dark. Mycelia were harvested, flash frozen and stored at -80C. From each ABVM24C replicate or O7VM24C replicate , 20 mg lyophilized material were lysed in three FastPrep FP120 homogenization steps of 45 s at 4.5, 5.5 and 6.5 m/s in the presence of 250 mg 0.5 mm glass beads, cooling the samples for 5 min on ice between steps. RNA was extracted using 1 mL Qiazol (Qiagen) and 0.2 mL chloroform ReagentPlus (Sigma-Aldrich). The solution was centrifuged at 12000 xg for 15 min at 4C; thereafter, RNA from the resultant aqueous phase was washed on-column using the RNeasy Lipid Tissue Mini Kit (Qiagen) and eluted in 60 uL RNase-free water. Concentration and integrity of the purified RNA were determined with a Qubit (1.0) fluorometer (Life Technologies) and a Bioanalyzer 2100 (Agilent), respectively. Samples with a 260/280 nm ratio of 1.8-2.1 and a 28S/18S ratio of 1.5-2 were later used in library construction. TruSeq Stranded mRNA Sample Prep Kit (Illumina) was used to construct ABVM24 and O7VM24 expression libraries (three biological replicates each). Briefly, total RNA (1 ug) was poly(A) enriched and then reverse-transcribed into double-stranded cDNA in the presence of Actinomycin during first-strand synthesis. Double-stranded cDNA was fragmented, end-repaired and polyadenylated before being ligated to TruSeq adapters and selectively enriched by PCR. Concentration and quality of the enriched libraries were assessed using Qubit (1.0) fluorometer and LabChip GX (PerkinElmer), showing an average fragment size of 260 bp. Libraries were normalized to 10 nM with 10 mM Tris-HCl pH 8.5 supplemented with 0.1% Tween 20. In addition, TruSeq PE Cluster Kit v3-cBot-HS (Illumina) was used to generate clusters from 10 pM pooled normalized libraries.

characteristic: description

text: Coprinopsis cinerea

text: Coprinopsis cinerea

text: Vegetative Mycelium

characteristic: organism part

text: Coprinopsis cinerea

text: frozen specimen


E-MTAB-1955:DGE 24-h cold 1

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-1955:DGE 24-h cold 1

tag: Namespace:Jiangsu Province and Chinese Academy of Sciences

text: ArrayExpress

text: Protocols: Micropropagated plants were transferred and grown in the greenhouse for three month in Zhejiang academy of agricultural sciences. Total RNA was isolated using TRIzol reagent (Invitrogen, Carlsbad, CA) according to the manufacturer's instructions. Poly (A)+ mRNA was purified with oligo (dT) beads. RNA libraries were prepared for sequencing using standard Illumina protocols. For RNA Seq, a mixed cDNA sample of control plants and 1, 5, and 24 h cold-treated plants were used for library construction. For DGE, RNAs from control plants and 1, 5, and 24 h cold-treated plants were used for library construction separately.

text: seedling

characteristic: developmental stage

text: cold air temperature regimen

characteristic: growth condition

text: Anthurium andraeanum

characteristic: organism

text: Anthurium andraeanum

text: leaves

text: Anthurium andraeanum

text: frozen specimen

text: 6 degree celsius

characteristic: temperature

text: 24 hour

characteristic: time

text: DGE 24-h cold 1

characteristic: title


E-MTAB-1955:DGE control 1

characteristic: External Id

text: Jiangsu Province and Chinese Academy of Sciences

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-1955:DGE control 1

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: seedling

text: normal temperature

text: Anthurium andraeanum

text: Anthurium andraeanum

text: leaves

text: Anthurium andraeanum

text: frozen specimen

text: 23 degree celsius

text: 24 hour

text: DGE control 1


E-MTAB-1955:Trans mixture 1

characteristic: ENA-CHECKLIST

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-1955:Trans mixture 1

text: ArrayExpress

text: seedling

text: cold and normal temperature

text: Anthurium andraeanum

text: Anthurium andraeanum

text: leaves

text: Anthurium andraeanum

text: frozen specimen

characteristic: specimen with known storage state

text: 6 and 23 degree celsius

text: 0, 1, 5, 24 hour

text: Trans mixture 1


E-MTAB-1955:DGE 5-h cold 1

characteristic: ENA-FIRST-PUBLIC

text: public

characteristic: SRA accession

text: E-MTAB-1955:DGE 5-h cold 1

text: ArrayExpress

characteristic: description

text: seedling

text: cold air temperature regimen

text: Anthurium andraeanum

text: Anthurium andraeanum

text: leaves

characteristic: organism part

text: Anthurium andraeanum

text: frozen specimen

text: 6 degree celsius

text: 5 hour

text: DGE 5-h cold 1


E-MTAB-1955:DGE 1-h cold 1

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-1955:DGE 1-h cold 1

text: ArrayExpress

text: seedling

characteristic: developmental stage

text: cold air temperature regimen

characteristic: growth condition

text: Anthurium andraeanum

characteristic: organism

text: Anthurium andraeanum

text: leaves

text: Anthurium andraeanum

text: frozen specimen

text: 6 degree celsius

text: 1 hour

text: DGE 1-h cold 1


characteristic: External Id

text: LECA

text: public

text: gray rockcress

characteristic: common name

text: Arabis alpina

text: Arabis alpina

text: arabis alpina leaf sample

characteristic: title


text: DUNDEE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Solanum phureja doubled monoploid clone, DM1-3 516R44 (CIP801092) selected BAC clones

text: Solanum phureja

text: Solanum phureja

text: LuSP pooled BAC clones


characteristic: ENA-CHECKLIST

text: AGR

characteristic: INSDC last update

text: public

text: beetle metagenome

text: beetle metagenome


text: UD

text: public

characteristic: INSDC status

characteristic: collection date

text: hairy maggot blowfly

text: 454 sequencing was performed from 0.01 gm of early egg (0-3 hour old) stage of Chrysomya rufifacies for better understanding of associated bacterial diversity.

text: Terrestrial (ENVO:00000446)

characteristic: environment (biome)

text: insecta-associated habitat (ENVO:00009004)

characteristic: environment (feature)

text: Organic waste (ENVO:00002873)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: Chrysomya rufifacies

text: Interkingdom Signaling by Bacteria Associated with Conspecific and Heterospecific Eggs of Cochliomyia macellaria and Chrysomya rufifacies (Diptera: Calliphoridae) Governs Secondary Colonization of Carrion

characteristic: project name

text: Chrysomya rufifacies

characteristic: sequencing method

text: Bacterial diversity associated early egg (0-3 hours old) stage of Chrysomya rufifacies.


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UD

text: public

characteristic: SRA accession

text: hairy maggot blowfly

characteristic: common name

text: Bacterial diversity associated mid-egg (4-6 hours old) stage of Chrysomya rufifacies.

characteristic: description

text: Terrestrial (ENVO:00000446)

text: Organic waste (ENVO:00002873)

text: host-associated

text: USA

text: metagenome

text: Chrysomya rufifacies

characteristic: organism

text: Chrysomya rufifacies

characteristic: title


characteristic: ENA-CHECKLIST

text: UD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collection date

text: hairy maggot blowfly

text: Bacterial diversity associated late-egg (7-9 hours old) stage of Chrysomya rufifacies.

text: Terrestrial (ENVO:00000446)

characteristic: environment (biome)

text: Organic waste (ENVO:00002873)

text: host-associated

text: USA

text: metagenome

text: Chrysomya rufifacies

text: Chrysomya rufifacies


text: UD

text: public

text: secondary screw-worm

text: Bacterial diversity associated early-egg (0-3 hours old) stage of Cochliomyia macellaria.

text: Terrestrial (ENVO:00000446)

characteristic: environment (feature)

text: Organic waste (ENVO:00002873)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: Cochliomyia macellaria

characteristic: project name

text: Cochliomyia macellaria

characteristic: sequencing method


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UD

text: public

characteristic: SRA accession

text: secondary screw-worm

characteristic: common name

text: Bacterial diversity associated mid-egg (4-6 hours old) stage of Cochliomyia macellaria.

characteristic: description

text: Terrestrial (ENVO:00000446)

text: Organic waste (ENVO:00002873)

text: host-associated

text: USA

text: metagenome

text: Cochliomyia macellaria

characteristic: organism

text: Cochliomyia macellaria

characteristic: title


characteristic: ENA-CHECKLIST

text: UD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collection date

text: secondary screw-worm

text: Bacterial diversity associated late-egg (7-9 hours old) stage of Cochliomyia macellaria.

text: Terrestrial (ENVO:00000446)

characteristic: environment (biome)

text: Organic waste (ENVO:00002873)

text: host-associated

text: USA

text: metagenome

text: Cochliomyia macellaria

text: Cochliomyia macellaria


text: RU-USA

text: public

text: mixed culture

text: mixed culture

text: microbial communities in activated sludge exposed to AgNPs


DELETE-wp

text: CAM

text: public

text: DELETE-wp

text: metagenome

text: metagenome

text: DELETE-wp


DELETE-df

text: CAM

text: public

text: DELETE-df

text: metagenome

text: metagenome

text: DELETE-df


text: CAUK

text: public

text: Escherichia coli K-12

text: Escherichia coli K-12

characteristic: strain

characteristic: sub strain


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CAUK

text: public

text: This population was derived by experimental evolution of Escherichia coli K-12 strain MYMC4100 (Schulenburg lab, Kiel, Germany). It was cultivated in the well of a 384-well microtiter plate in M9 minimal medium containing 0.07 µg/ml doxycycline and 4.8 µg/ml erythromycin. The population was propagated for five days with daily transfer into a new plate with fresh medium and fresh antibiotic(s) concentrations.

text: Escherichia coli K-12

text: Escherichia coli K-12

text: Escherichia coli K-12 strain MYMC4100 evolved for five days with 0.07 µg/ml doxycycline and 4.8 µg/ml erythromycin in M9 minimal medium.


DBVPG 6033i

characteristic: External Id

text: UOM-BCF

text: public

characteristic: SRA accession

text: DBVPG 6033i

text: Samples were obtained from DBVPG Industrial Yeasts Collection, University of Perugia, Italy.

text: Saccharomyces pastorianus

text: Saccharomyces pastorianus

text: Saccharomyces pastorianus


DBVPG 6257i

text: UOM-BCF

text: public

text: DBVPG 6257i

characteristic: description

text: Saccharomyces pastorianus

text: Saccharomyces pastorianus

text: Saccharomyces pastorianus


DBVPG 6261i

text: UOM-BCF

text: public

text: DBVPG 6261i

text: Saccharomyces pastorianus

characteristic: organism

text: Saccharomyces pastorianus

text: Saccharomyces pastorianus


text: UCONNMISEQ

text: public

text: BEI Resources: HM-276D

characteristic: culture collection

text: HMP Mock Even community supplied by BEI Resources

text: synthetic metagenome

text: synthetic metagenome

text: HMP Mock Even v4v5 454

characteristic: title


characteristic: ENA-CHECKLIST

text: CAUK

characteristic: INSDC center name

text: public

text: This population was derived by experimental evolution of Escherichia coli K-12 strain MYMC4100 (Schulenburg lab, Kiel, Germany). It was cultivated in the well of a 384-well microtiter plate in M9 minimal medium containing no antibiotics (control). The population was propagated for five days with daily transfer into a new plate with fresh medium.

text: Escherichia coli K-12

text: Escherichia coli K-12

text: Escherichia coli K-12 strain MYMC4100 evolved for five days with no antibiotics in M9 minimal medium.


text: CAUK

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: This population was derived by experimental evolution of Escherichia coli K-12 strain MYMC4100 (Schulenburg lab, Kiel, Germany). It was cultivated in the well of a 384-well microtiter plate in M9 minimal medium containing 0.15 µg/ml doxycycline. The population was propagated for five days with daily transfer into a new plate with fresh medium and fresh antibiotic(s) concentrations.

text: Escherichia coli K-12

text: Escherichia coli K-12

text: Escherichia coli K-12 strain MYMC4100 evolved for five days with 0.15 µg/ml doxycycline in M9 minimal medium.


text: CAUK

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: This population was derived by experimental evolution of Escherichia coli K-12 strain MYMC4100 (Schulenburg lab, Kiel, Germany). It was cultivated in the well of a 384-well microtiter plate in M9 minimal medium containing 0.15 µg/ml doxycycline and 9 µg/ml erythromycin. The population was propagated for five days with daily transfer into a new plate with fresh medium and fresh antibiotic(s) concentrations. The population did not show visible growth on day five of the experiment and was regrown for sequencing for a day without antibiotics.

text: Escherichia coli K-12

text: Escherichia coli K-12

text: Escherichia coli K-12 strain MYMC4100 evolved for five days with 0.15 µg/ml doxycycline and 9 µg/ml erythromycin in M9 minimal medium. No visible growth on day 5; 1 day regrowth for sequencing without antibiotics.


text: CAUK

text: public

text: This population was derived by experimental evolution of Escherichia coli K-12 strain MYMC4100 (Schulenburg lab, Kiel, Germany). It was cultivated in the well of a 384-well microtiter plate in M9 minimal medium containing 0.15 µg/ml doxycycline and 9 µg/ml erythromycin. The population was propagated for five days with daily transfer into a new plate with fresh medium and fresh antibiotic(s) concentrations. The population visibly grew on day five of the experiment and was regrown for sequencing for a day without antibiotics.

text: Escherichia coli K-12

text: Escherichia coli K-12

text: Escherichia coli K-12 strain MYMC4100 evolved for five days with 0.15 µg/ml doxycycline and 9 µg/ml erythromycin in M9 minimal medium. Visible growth on day 5; 1 day regrowth for sequencing without antibiotics.


text: CAUK

text: public

text: This population was derived by experimental evolution of Escherichia coli K-12 strain MYMC4100 (Schulenburg lab, Kiel, Germany). It was cultivated in the well of a 384-well microtiter plate in M9 minimal medium containing 0.15 µg/ml doxycycline and 9 µg/ml erythromycin. The population was propagated for five days with daily transfer into a new plate with fresh medium and fresh antibiotic(s) concentrations. The population visibly grew on day five of the experiment and was regrown for sequencing for a day with antibiotics.

text: Escherichia coli K-12

text: Escherichia coli K-12

text: Escherichia coli K-12 strain MYMC4100 evolved for five days with 0.15 µg/ml doxycycline and 9 µg/ml erythromycin in M9 minimal medium. Visible growth on day 5; 1 day regrowth for sequencing with antibiotics.


text: CAM

text: public

text: Pst1 RAD wild-caught male

characteristic: latitude

characteristic: longitude

text: Heliconius erato notabilis

text: Heliconius erato notabilis

text: Jiggins 16301


text: CAM

text: public

text: Pst1 RAD wild-caught male

text: Heliconius erato notabilis

text: Heliconius erato notabilis

text: Jiggins 16305


text: CAUK

text: public

text: This strain was obtained from the Coli Genetic Stock Center in August 2010 as Escherichia coli K-12 strain MC4100. It was named Escherichia coli K-12 strain MYMC4100 in the Schulenburg lab, University of Kiel, Germany. A reference genome was created from an existing related reference genome (BW2952, accession: NC_012759), using the here published reads. This was the starting strain for the evolution experiment resulting in all the other strains sequenced for this study.

text: Escherichia coli K-12

text: Escherichia coli K-12

characteristic: strain

characteristic: sub strain

text: Stock Escherichia coli K-12 strain MYMC4100 from the Schulenburg lab, University of Kiel.


H2O snake

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UWEST

text: public

text: H2O snake

text: No

characteristic: chimera check

characteristic: collection date

text: Snakes

characteristic: environment (biome)

text: Venom gland

characteristic: environment (feature)

text: Venom

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: Customised Purelink gDNA kit

characteristic: nucleic acid extraction

text: unidentified

text: CCTACGGGAGGCAGCAG, ATTACCGCGGCTGCTGG

characteristic: pcr primers

text: Venom Microbiome

characteristic: project name

text: unidentified

text: Ion Torrent PGM 318 v1

characteristic: sequencing method

characteristic: target gene

characteristic: target subfragment

text: Control water collection from snake collection run


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UWEST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Envenomation 1

characteristic: body site

text: No

text: western diamondback rattlesnake

characteristic: common name

text: Snakes

text: Venom gland

text: Venom

text: host-associated

text: United Kingdom

text: Western diamond back rattlesnake

characteristic: host common name

characteristic: host subject id

unit: number

characteristic: host taxid

text: mimarks-survey

text: Customised Purelink gDNA kit

text: Crotalus atrox

characteristic: organism

text: CCTACGGGAGGCAGCAG, ATTACCGCGGCTGCTGG

text: Venom Microbiome

text: Crotalus atrox

text: Ion Torrent PGM 318 v1

text: Crotalus Atrox Envenomation 1

characteristic: title


characteristic: ENA-LAST-UPDATE

text: UWEST

text: public

text: Envenomation 1

text: No

characteristic: chimera check

characteristic: collection date

text: Spiders

characteristic: environment (biome)

text: Venom gland

characteristic: environment (feature)

text: Venom

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Indian ornamental

text: mimarks-survey

characteristic: investigation type

text: Customised Purelink gDNA kit

characteristic: nucleic acid extraction

text: Poecilotheria regalis

text: CCTACGGGAGGCAGCAG, ATTACCGCGGCTGCTGG

characteristic: pcr primers

text: Venom Microbiome

characteristic: project name

text: Poecilotheria regalis

text: Ion Torrent PGM 318 v1

characteristic: sequencing method

characteristic: target gene

characteristic: target subfragment

text: Poecilotheria regalis envenomation 1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UWEST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Envenomation 1

characteristic: body site

text: No

text: Spiders

text: Venom gland

text: Venom

text: host-associated

text: United Kingdom

text: Indian Ornamental

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: mimarks-survey

text: Customised Purelink gDNA kit

text: Poecilotheria regalis

characteristic: organism

text: CCTACGGGAGGCAGCAG, ATTACCGCGGCTGCTGG

text: Venom Microbiome

text: Poecilotheria regalis

text: Ion Torrent PGM 318 v1

text: Poecilotheria regalis envenomation 1

characteristic: title


characteristic: ENA-LAST-UPDATE

text: UWEST

text: public

text: Envenomation 1

text: No

characteristic: chimera check

characteristic: collection date

text: Spiders

characteristic: environment (biome)

text: Venom gland

characteristic: environment (feature)

text: Venom

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Indian Ornamental

text: mimarks-survey

characteristic: investigation type

text: Customised Purelink gDNA kit

characteristic: nucleic acid extraction

text: Poecilotheria regalis

text: CCTACGGGAGGCAGCAG, ATTACCGCGGCTGCTGG

characteristic: pcr primers

text: Venom Microbiome

characteristic: project name

text: Poecilotheria regalis

text: Ion Torrent PGM 318 v1

characteristic: sequencing method

characteristic: target gene

text: Poecilotheria regalis Envenomation 1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UWEST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Envenomation 2

characteristic: body site

text: No

text: Spiders

text: Venom gland

text: Venom

text: host-associated

text: United Kingdom

text: Indian ornamental

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: mimarks-survey

text: Customised Purelink gDNA kit

text: Poecilotheria regalis

characteristic: organism

text: CCTACGGGAGGCAGCAG, ATTACCGCGGCTGCTGG

text: Venom Microbiome

text: Poecilotheria regalis

text: Ion Torrent PGM 318 v1

characteristic: target subfragment

text: Poecilotheria regalis envenomation 2


characteristic: ENA-LAST-UPDATE

text: UWEST

text: public

text: Envenomation 2

text: No

characteristic: chimera check

characteristic: collection date

text: salmon pink birdeater

characteristic: common name

text: Spiders

characteristic: environment (biome)

text: Venom gland

characteristic: environment (feature)

text: Venom

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Salmon pink

text: mimarks-survey

characteristic: investigation type

text: Customised Purelink gDNA kit

characteristic: nucleic acid extraction

text: Lasiodora parahybana

text: CCTACGGGAGGCAGCAG, ATTACCGCGGCTGCTGG

characteristic: pcr primers

text: Venom Microbiome

characteristic: project name

text: Lasiodora parahybana

text: Ion Torrent PGM 318 v1

characteristic: sequencing method

text: Lasiodora parahybana

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: CAM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Pst1 RAD wild-caught male

characteristic: description

characteristic: latitude

characteristic: longitude

text: Heliconius erato notabilis

characteristic: organism

text: Heliconius erato notabilis

text: Jiggins 16322


characteristic: ENA-LAST-UPDATE

text: CAM

text: public

text: Pst1 RAD wild-caught male

text: Heliconius erato lativitta

text: Heliconius erato lativitta

text: Jiggins 16446


text: CAM

text: public

text: Pst1 RAD wild-caught male

text: Heliconius erato lativitta

text: Heliconius erato lativitta

text: Jiggins 16454


text: CAM

text: public

text: Pst1 RAD wild-caught female

text: Heliconius erato lativitta

text: Heliconius erato lativitta

text: Jiggins 16467


text: CAM

text: public

text: Pst1 RAD wild-caught male

text: Heliconius erato lativitta

text: Heliconius erato lativitta

text: Jiggins 16553


text: CAM

text: public

text: Pst1 RAD wild-caught male

text: Heliconius erato lativitta

text: Heliconius erato lativitta

text: Jiggins 16556


text: CAM

text: public

text: Pst1 RAD wild-caught male

text: Heliconius erato notabilis

text: Heliconius erato notabilis

text: Jiggins 16702


text: CAM

text: public

text: Pst1 RAD wild-caught male

text: Heliconius erato notabilis

text: Heliconius erato notabilis

text: Jiggins 16703


text: CAM

text: public

text: Pst1 RAD wild-caught male

text: Heliconius erato notabilis

text: Heliconius erato notabilis

text: Jiggins 16704


text: CAM

text: public

text: Pst1 RAD wild-caught male

text: Heliconius erato notabilis

text: Heliconius erato notabilis

text: Jiggins 16705


text: CAM

text: public

text: Pst1 RAD wild-caught male

text: Heliconius erato notabilis

text: Heliconius erato notabilis

text: Jiggins 16707


text: CAM

text: public

text: Pst1 RAD wild-caught female

text: Heliconius erato notabilis

text: Heliconius erato notabilis

text: Jiggins 16709


text: CAM

text: public

text: Pst1 RAD wild-caught male

text: Heliconius erato notabilis

text: Heliconius erato notabilis

text: Jiggins 16712


text: CAM

text: public

text: Pst1 RAD wild-caught male

text: Heliconius erato lativitta

text: Heliconius erato lativitta

text: Jiggins 17394


text: CAM

text: public

text: Pst1 RAD wild-caught male

text: Heliconius erato lativitta

text: Heliconius erato lativitta

text: Jiggins 17396


text: CAM

text: public

text: Pst1 RAD wild-caught male

text: Heliconius erato lativitta

text: Heliconius erato lativitta

text: Jiggins 17397


text: CAM

text: public

text: Pst1 RAD wild-caught female

text: Heliconius erato lativitta

text: Heliconius erato lativitta

text: Jiggins 17406


text: CAM

text: public

text: Pst1 RAD wild-caught female

text: Heliconius erato lativitta

text: Heliconius erato lativitta

text: Jiggins 17409


text: CAM

text: public

text: Pst1 RAD wild-caught male

text: Heliconius melpomene

text: Heliconius melpomene

text: Jiggins 16338


text: CAM

text: public

text: Pst1 RAD wild-caught male

text: Heliconius melpomene

text: Heliconius melpomene

text: Jiggins 16339


text: CAM

text: public

text: Pst1 RAD wild-caught male

text: Heliconius melpomene

text: Heliconius melpomene

text: Jiggins 16341


text: UWEST

text: public

text: Envenomation 2

characteristic: body site

text: No

characteristic: chimera check

characteristic: collection date

text: Spiders

characteristic: environment (biome)

text: Venom gland

characteristic: environment (feature)

text: Venom

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Indian ornamental

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Customised Purelink gDNA kit

characteristic: nucleic acid extraction

text: Poecilotheria regalis

text: CCTACGGGAGGCAGCAG, ATTACCGCGGCTGCTGG

characteristic: pcr primers

text: Venom Microbiome

characteristic: project name

text: Poecilotheria regalis

text: Ion Torrent PGM 318 v1

characteristic: target gene

characteristic: target subfragment

text: Poecilotheria regalis Envenomation 2


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UWEST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Envenomation 1

characteristic: body site

text: No

characteristic: chimera check

text: puff adder

characteristic: common name

text: Snakes

text: Venom gland

text: Venom

text: host-associated

text: United Kingdom

text: Puf adder

text: mimarks-survey

text: Customised Purelink gDNA kit

text: Bitis arietans

characteristic: organism

text: CCTACGGGAGGCAGCAG, ATTACCGCGGCTGCTGG

text: Venom Microbiome

text: Bitis arietans

text: Ion Torrent PGM 318 v1

characteristic: sequencing method

text: Bitis Areitans Envenomation 1

characteristic: title


text: UWEST

text: public

text: Envenomation 1

text: No

characteristic: collection date

text: barba amarilla

text: Snakes

characteristic: environment (biome)

text: Venom gland

characteristic: environment (feature)

text: Venom

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: fer-de-lance

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Customised Purelink gDNA kit

characteristic: nucleic acid extraction

text: Bothrops atrox

text: CCTACGGGAGGCAGCAG, ATTACCGCGGCTGCTGG

characteristic: pcr primers

text: Venom Microbiome

characteristic: project name

text: Bothrops atrox

text: Ion Torrent PGM 318 v1

characteristic: target gene

characteristic: target subfragment

text: Bothrops atrox Envenomation 1


H2O invert

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UWEST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: H2O invert

characteristic: Submitter Id

text: No

characteristic: chimera check

text: water

text: host-associated

text: United Kingdom

text: water

text: mimarks-survey

text: Customised Purelink gDNA kit

text: unidentified

characteristic: organism

text: CCTACGGGAGGCAGCAG, ATTACCGCGGCTGCTGG

text: Venom Microbiome

text: unidentified

text: Ion Torrent PGM 318 v1

characteristic: sequencing method

text: Water from invertebrate collection run

characteristic: title


text: UWEST

text: public

text: Envenomation 2

characteristic: body site

text: No

characteristic: collection date

text: spitting cobra

characteristic: common name

text: Snakes

characteristic: environment (biome)

text: Venom gland

characteristic: environment (feature)

text: Venom

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Black-necked cobra

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Customised Purelink gDNA kit

characteristic: nucleic acid extraction

text: Naja nigricollis

text: CCTACGGGAGGCAGCAG, ATTACCGCGGCTGCTGG

characteristic: pcr primers

text: Venom Microbiome

characteristic: project name

text: Naja nigricollis

text: Ion Torrent PGM 318 v1

text: Naja nigricollis envenomation 2


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UWEST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Envenomation 2

text: No

characteristic: chimera check

text: spitting cobra

text: Snakes

text: Venom gland

text: Venom

text: host-associated

text: United Kingdom

text: Black-necked cobra

text: mimarks-survey

text: Customised Purelink gDNA kit

text: Naja nigricollis

characteristic: organism

text: CCTACGGGAGGCAGCAG, ATTACCGCGGCTGCTGG

text: Venom Microbiome

text: Naja nigricollis

text: Ion Torrent PGM 318 v1

characteristic: sequencing method

characteristic: target gene

characteristic: target subfragment

text: Naja nigricolis Envenomation 2

characteristic: title


text: UWEST

text: public

text: Envenomation 1

characteristic: body site

text: No

characteristic: collection date

text: salmon pink birdeater

characteristic: common name

text: Spiders

characteristic: environment (biome)

text: Venom gland

characteristic: environment (feature)

text: Venom

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Salmon pink

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Customised Purelink gDNA kit

characteristic: nucleic acid extraction

text: Lasiodora parahybana

text: CCTACGGGAGGCAGCAG, ATTACCGCGGCTGCTGG

characteristic: pcr primers

text: Venom Microbiome

characteristic: project name

text: Lasiodora parahybana

text: Ion Torrent PGM 318 v1

text: Lasiodora parahybana Envenomation 1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UWEST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Envenomation 1

text: No

characteristic: chimera check

text: spitting cobra

text: Snakes

text: Venom gland

text: Venom

text: host-associated

text: United Kingdom

text: Black-necked cobra

text: mimarks-survey

text: Customised Purelink gDNA kit

text: Naja nigricollis

characteristic: organism

text: CCTACGGGAGGCAGCAG, ATTACCGCGGCTGCTGG

text: Venom Microbiome

text: Naja nigricollis

text: Ion Torrent PGM 318 v1

characteristic: sequencing method

characteristic: target gene

characteristic: target subfragment

text: Naja nigricollis envenomation 1

characteristic: title


text: UWEST

text: public

text: Envenomation 1

characteristic: body site

text: No

characteristic: collection date

text: spitting cobra

characteristic: common name

text: Snakes

characteristic: environment (biome)

text: Venom gland

characteristic: environment (feature)

text: Venom

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Black-necked cobra

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Customised Purelink gDNA kit

characteristic: nucleic acid extraction

text: Naja nigricollis

text: CCTACGGGAGGCAGCAG, ATTACCGCGGCTGCTGG

characteristic: pcr primers

text: Venom Microbiome

characteristic: project name

text: Naja nigricollis

text: Ion Torrent PGM 318 v1

text: Naja nigricollis Envenomation 1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UWEST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Envenomation 1

text: No

characteristic: chimera check

text: Australian taipan

text: Snakes

text: Venom gland

text: Venom

text: host-associated

text: United Kingdom

text: Taipan

text: mimarks-survey

text: Customised Purelink gDNA kit

text: Oxyuranus scutellatus scutellatus

characteristic: organism

text: CCTACGGGAGGCAGCAG, ATTACCGCGGCTGCTGG

text: Venom Microbiome

text: Oxyuranus scutellatus scutellatus

text: Ion Torrent PGM 318 v1

characteristic: sequencing method

characteristic: target gene

characteristic: target subfragment

text: Oxyuranus scutallatus

characteristic: title


text: UWEST

text: public

text: Envenomation 1

characteristic: body site

text: No

characteristic: collection date

text: spitting cobra

characteristic: common name

text: Snakes

characteristic: environment (biome)

text: Venom gland

characteristic: environment (feature)

text: Venom

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Black-necked cobra

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Customised Purelink gDNA kit

characteristic: nucleic acid extraction

text: Naja nigricollis

text: CCTACGGGAGGCAGCAG, ATTACCGCGGCTGCTGG

characteristic: pcr primers

text: Venom Microbiome

characteristic: project name

text: Naja nigricollis

text: Ion Torrent PGM 318 v1

text: Naja Nigricollis Envenomation 1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVIE-CSB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Listeria monocytogenes

characteristic: organism

text: Listeria monocytogenes

text: Intracellular

characteristic: title


text: UNIVIE-CSB

text: public

text: Listeria monocytogenes

text: Listeria monocytogenes

text: Extracellular


text: MPI-CE

text: public

text: Endophytes from roots and leaves of N.attenuata plant

characteristic: description

text: Nicotiana attenuata

text: Nicotiana attenuata

text: bacterial endophytes of plants


DBVPG 6033

text: UOM-BCF

text: public

text: DBVPG 6033

text: DBVPG Industrial Yeasts Collection, University of Perugia, Italy.

text: Saccharomyces pastorianus

text: Saccharomyces pastorianus

text: S. pastorianus


DBVPG 6257

text: UOM-BCF

text: public

text: DBVPG 6257

text: Saccharomyces pastorianus

text: Saccharomyces pastorianus

text: S. pastorianus


DBVPG 6261

text: UOM-BCF

text: public

text: DBVPG 6261

text: Saccharomyces pastorianus

text: Saccharomyces pastorianus

text: S. pastorianus


text: IOA

text: public

characteristic: anonymized name

text: Atlantic salmon

characteristic: common name

text: fry

characteristic: dev stage

text: United Kingdom, Scotland

characteristic: geographic location (country and/or sea)

text: RR

characteristic: haplotype

text: Salmo salar

text: B

characteristic: pop variant

text: Salmo salar

characteristic: timepoint

text: Control fry 1837, Family B, Genotype RR


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IOA

text: public

text: Atlantic salmon

text: fry

text: United Kingdom, Scotland

text: RR

text: Salmo salar

text: B

text: Salmo salar

text: Control fry 1838, Family B, Genotype RR


text: IOA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Atlantic salmon

text: fry

text: United Kingdom, Scotland

text: RR

text: Salmo salar

text: B

text: Salmo salar

text: Control fry 1846, Family B, Genotype RR


text: IOA

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Atlantic salmon

text: fry

text: United Kingdom, Scotland

text: RR

text: Salmo salar

characteristic: organism

text: B

text: Salmo salar

text: Control fry 1852, Family B, Genotype RR

characteristic: title


text: IOA

text: public

characteristic: anonymized name

text: Atlantic salmon

characteristic: common name

text: fry

characteristic: dev stage

text: United Kingdom, Scotland

text: RR

text: Salmo salar

text: B

text: Salmo salar

text: Control fry 1857, Family B, Genotype RR


text: CAM

text: public

text: Pst1 RAD wild-caught female

characteristic: description

characteristic: latitude

characteristic: longitude

text: Heliconius melpomene plesseni

text: Heliconius melpomene plesseni

text: Jiggins 16347


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: CAM

text: public

text: Pst1 RAD wild-caught female

text: Heliconius melpomene plesseni

text: Heliconius melpomene plesseni

text: Jiggins 16349


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CAM

text: public

text: Pst1 RAD wild-caught male

text: Heliconius melpomene plesseni

text: Heliconius melpomene plesseni

text: Jiggins 16354


text: CAM

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Pst1 RAD wild-caught male

text: Heliconius melpomene

text: Heliconius melpomene

text: Jiggins 16424


text: CAM

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Pst1 RAD wild-caught male

text: Heliconius timareta

text: Heliconius timareta

text: Jiggins 16425


text: CAM

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Pst1 RAD wild-caught male

text: Heliconius timareta

text: Heliconius timareta

text: Jiggins 16427


text: CAM

text: public

text: Pst1 RAD wild-caught female

text: Heliconius melpomene

characteristic: organism

text: Heliconius melpomene

text: Jiggins 16428

characteristic: title


text: CAM

text: public

text: Pst1 RAD wild-caught male

text: Heliconius timareta

text: Heliconius timareta

text: Jiggins 16429


text: CAM

text: public

text: Pst1 RAD wild-caught male

text: Heliconius timareta

text: Heliconius timareta

text: Jiggins 16436


text: CAM

text: public

text: Pst1 RAD wild-caught male

text: Heliconius melpomene malleti

text: Heliconius melpomene malleti

text: Jiggins 16540


text: CAM

text: public

text: Pst1 RAD wild-caught male

text: Heliconius melpomene malleti

text: Heliconius melpomene malleti

text: Jiggins 16542


text: CAM

text: public

text: Pst1 RAD wild-caught male

text: Heliconius melpomene

text: Heliconius melpomene

text: Jiggins 16654


text: CAM

text: public

text: Pst1 RAD wild-caught female

text: Heliconius melpomene

text: Heliconius melpomene

text: Jiggins 16655


text: CAM

text: public

text: Pst1 RAD wild-caught female

text: Heliconius melpomene

text: Heliconius melpomene

text: Jiggins 16657


text: CAM

text: public

text: Pst1 RAD wild-caught male

text: Heliconius melpomene

text: Heliconius melpomene

text: Jiggins 16658


text: CAM

text: public

text: Pst1 RAD wild-caught male

text: Heliconius melpomene plesseni

text: Heliconius melpomene plesseni

text: Jiggins 16686


text: CAM

text: public

text: Pst1 RAD wild-caught female

text: Heliconius melpomene plesseni

text: Heliconius melpomene plesseni

text: Jiggins 16689


text: CAM

text: public

text: Pst1 RAD wild-caught male

text: Heliconius melpomene plesseni

text: Heliconius melpomene plesseni

text: Jiggins 16690


text: CAM

text: public

text: Pst1 RAD wild-caught male

text: Heliconius melpomene plesseni

text: Heliconius melpomene plesseni

text: Jiggins 16692


text: CAM

text: public

text: Pst1 RAD wild-caught male

text: Heliconius melpomene plesseni

text: Heliconius melpomene plesseni

text: Jiggins 16694


text: CAM

text: public

text: Pst1 RAD wild-caught female

text: Heliconius melpomene plesseni

text: Heliconius melpomene plesseni

text: Jiggins 16696


text: CAM

text: public

text: Pst1 RAD wild-caught female

text: Heliconius melpomene plesseni

text: Heliconius melpomene plesseni

text: Jiggins 16698


text: CAM

text: public

text: Pst1 RAD wild-caught male

text: Heliconius timareta

text: Heliconius timareta

text: Jiggins 17380


text: CAM

text: public

text: Pst1 RAD wild-caught male

text: Heliconius timareta

text: Heliconius timareta

text: Jiggins 17382


text: CAM

text: public

text: Pst1 RAD wild-caught male

text: Heliconius melpomene malleti

text: Heliconius melpomene malleti

text: Jiggins 17387


text: CAM

text: public

text: Pst1 RAD wild-caught male

text: Heliconius timareta

text: Heliconius timareta

text: Jiggins 17390


text: CAM

text: public

text: Pst1 RAD wild-caught male

text: Heliconius timareta

text: Heliconius timareta

text: Jiggins 17402


text: CAM

text: public

text: Pst1 RAD wild-caught

text: Heliconius erato emma

text: Heliconius erato emma

text: McMillan_Counterman NCS0815


text: CAM

text: public

text: Pst1 RAD wild-caught

text: Heliconius erato emma

text: Heliconius erato emma

text: McMillan_Counterman NCS0816


text: CAM

text: public

text: Pst1 RAD wild-caught

text: Heliconius erato emma

text: Heliconius erato emma

text: McMillan_Counterman NCS0818


text: UWEST

text: public

text: Envenomation 1

characteristic: body site

text: No

characteristic: chimera check

characteristic: collection date

text: salmon pink birdeater

characteristic: common name

text: Spiders

characteristic: environment (biome)

text: Venom gland

characteristic: environment (feature)

text: Venom

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Salmon pink

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Customised Purelink gDNA kit

characteristic: nucleic acid extraction

text: Lasiodora parahybana

text: CCTACGGGAGGCAGCAG, ATTACCGCGGCTGCTGG

characteristic: pcr primers

text: Venom Microbiome

characteristic: project name

text: Lasiodora parahybana

text: Ion Torrent PGM 318 v1

characteristic: sequencing method

characteristic: target gene

characteristic: target subfragment

text: Lasiodora parahybana Envenomaton 1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UWEST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Envenomation 2

characteristic: body site

text: No

characteristic: chimera check

characteristic: collection date

text: salmon pink birdeater

characteristic: common name

text: Spiders

text: Venom gland

text: Venom

text: host-associated

text: United Kingdom

text: salmon pink

text: mimarks-survey

text: Customised Purelink gDNA kit

text: Lasiodora parahybana

characteristic: organism

text: CCTACGGGAGGCAGCAG, ATTACCGCGGCTGCTGG

text: Venom Microbiome

text: Lasiodora parahybana

text: Ion Torrent PGM 318 v1

text: Lasiodora parahybana Envenomation 2

characteristic: title


text: UWEST

text: public

text: Envenomation 2

text: No

text: salmon pink birdeater

text: Spider

characteristic: environment (biome)

text: Venom gland

characteristic: environment (feature)

text: Venom

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Salmon pink

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Customised Purelink gDNA kit

characteristic: nucleic acid extraction

text: Lasiodora parahybana

text: CCTACGGGAGGCAGCAG, ATTACCGCGGCTGCTGG

characteristic: pcr primers

text: Venom Microbiome

characteristic: project name

text: Lasiodora parahybana

text: Ion Torrent PGM 318 v1

characteristic: sequencing method

characteristic: target gene

characteristic: target subfragment

text: Lasiodora parahybana Envenomation 2


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UWEST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Envenomation 1

characteristic: body site

text: No

characteristic: chimera check

characteristic: collection date

text: salmon pink birdeater

characteristic: common name

text: Spider

text: Venom gland

text: Venom

text: host-associated

text: United Kingdom

text: Salmon pink

text: mimarks-survey

text: Customised Purelink gDNA kit

text: Lasiodora parahybana

characteristic: organism

text: CCTACGGGAGGCAGCAG, ATTACCGCGGCTGCTGG

text: Venom Microbiome

text: Lasiodora parahybana

text: Ion Torrent PGM 318 v1

text: Lasiodora parahybana envenomation 1

characteristic: title


text: UWEST

text: public

text: Oral

text: No

text: barba amarilla

text: Snakes

characteristic: environment (biome)

text: Venom gland

characteristic: environment (feature)

text: Venom

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: fer-de-lance

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Customised Purelink gDNA kit

characteristic: nucleic acid extraction

text: Bothrops atrox

text: CCTACGGGAGGCAGCAG, ATTACCGCGGCTGCTGG

characteristic: pcr primers

text: Venom Microbiome

characteristic: project name

text: Bothrops atrox

text: Ion Torrent PGM 318 v1

characteristic: sequencing method

characteristic: target gene

characteristic: target subfragment

text: Bothrops atrox oral swab


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UWEST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Oral

characteristic: body site

text: No

characteristic: chimera check

characteristic: collection date

text: salmon pink birdeater

characteristic: common name

text: Spiders

text: Venom gland

text: Venom

text: host-associated

text: United Kingdom

text: Salmon pink

text: mimarks-survey

text: Customised Purelink gDNA kit

text: Lasiodora parahybana

characteristic: organism

text: CCTACGGGAGGCAGCAG, ATTACCGCGGCTGCTGG

text: Venom Microbiome

text: Lasiodora parahybana

text: Ion Torrent PGM 318 v1

text: Lasiodora parahybana oral swab

characteristic: title


text: UWEST

text: public

text: Oral

text: No

text: spitting cobra

text: Snakes

characteristic: environment (biome)

text: Venom gland

characteristic: environment (feature)

text: Venom

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Black-necked cobra

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Customised Purelink gDNA kit

characteristic: nucleic acid extraction

text: Naja nigricollis

text: CCTACGGGAGGCAGCAG, ATTACCGCGGCTGCTGG

characteristic: pcr primers

text: Venom Microbiome

characteristic: project name

text: Naja nigricollis

text: Ion Torrent PGM 318 v1

characteristic: sequencing method

characteristic: target gene

characteristic: target subfragment

text: Naja nigricollis oral swab


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UWEST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Oral

characteristic: body site

text: No

characteristic: chimera check

characteristic: collection date

text: Spiders

text: Venom gland

text: Venom

text: host-associated

text: United Kingdom

text: Indian ornamental

text: mimarks-survey

text: Customised Purelink gDNA kit

text: Poecilotheria regalis

characteristic: organism

text: CCTACGGGAGGCAGCAG, ATTACCGCGGCTGCTGG

text: Venom Microbiome

text: Poecilotheria regalis

text: Ion Torrent PGM 318 v1

text: Poecilotheria regalis oral swab

characteristic: title


text: IOA

text: public

characteristic: anonymized name

text: Atlantic salmon

characteristic: common name

text: fry

characteristic: dev stage

text: United Kingdom, Scotland

characteristic: geographic location (country and/or sea)

text: RR

characteristic: haplotype

text: Salmo salar

text: B

characteristic: pop variant

text: Salmo salar

characteristic: timepoint

text: Control fry 1861, Family B, Genotype RR


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IOA

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Atlantic salmon

text: fry

text: United Kingdom, Scotland

text: SS

text: Salmo salar

text: B

text: Salmo salar

text: Control fry 1815, Family B, Genotype SS


text: IOA

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Atlantic salmon

text: fry

text: United Kingdom, Scotland

text: SS

text: Salmo salar

text: B

text: Salmo salar

text: Control fry 1823, Family B, Genotype SS


text: IOA

text: public

characteristic: anonymized name

text: Atlantic salmon

text: fry

text: United Kingdom, Scotland

text: SS

text: Salmo salar

characteristic: organism

text: B

text: Salmo salar

text: Control fry 1824, Family B, Genotype SS

characteristic: title


text: IOA

text: public

text: Atlantic salmon

characteristic: common name

text: fry

characteristic: dev stage

text: United Kingdom, Scotland

characteristic: geographic location (country and/or sea)

text: SS

text: Salmo salar

text: B

text: Salmo salar

text: Control fry 1854, Family B, Genotype SS


text: IOA

text: public

text: Atlantic salmon

text: fry

text: United Kingdom, Scotland

text: SS

characteristic: haplotype

text: Salmo salar

text: B

characteristic: pop variant

text: Salmo salar

characteristic: timepoint

text: Control fry 1856, Family B, Genotype SS


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: IOA

text: public

text: Atlantic salmon

text: fry

text: United Kingdom, Scotland

text: SS

text: Salmo salar

text: B

text: Salmo salar

text: Control fry 1860, Family B, Genotype SS


characteristic: External Id

text: IOA

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Atlantic salmon

text: fry

text: United Kingdom, Scotland

text: RR

text: Salmo salar

text: B

text: Salmo salar

text: 24h infected fry 1909, Family B, Genotype RR


text: IOA

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Atlantic salmon

text: fry

text: United Kingdom, Scotland

text: RR

text: Salmo salar

text: B

text: Salmo salar

text: 24h infected fry 1916, Family B, Genotype RR


text: IOA

text: public

characteristic: Submitter Id

characteristic: anonymized name

text: Atlantic salmon

text: fry

text: United Kingdom, Scotland

text: RR

text: Salmo salar

characteristic: organism

text: B

text: Salmo salar

text: 24h infected fry 1917, Family B, Genotype RR


text: IOA

text: public

text: Atlantic salmon

characteristic: common name

text: fry

characteristic: dev stage

text: United Kingdom, Scotland

text: RR

text: Salmo salar

text: B

text: Salmo salar

text: 24h infected fry 1963, Family B, Genotype RR

characteristic: title


text: IOA

text: public

text: Atlantic salmon

text: fry

text: United Kingdom, Scotland

characteristic: geographic location (country and/or sea)

text: RR

characteristic: haplotype

text: Salmo salar

text: B

characteristic: pop variant

text: Salmo salar

text: 24h infected fry 1972, Family B, Genotype RR


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: IOA

text: public

text: Atlantic salmon

text: fry

text: United Kingdom, Scotland

text: RR

text: Salmo salar

text: B

text: Salmo salar

characteristic: timepoint

text: 24h infected fry 1980, Family B, Genotype RR


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IOA

characteristic: INSDC center name

text: public

text: Atlantic salmon

text: fry

text: United Kingdom, Scotland

text: SS

text: Salmo salar

text: B

text: Salmo salar

text: 24h infected fry 1911, Family B, Genotype SS


text: IOA

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Atlantic salmon

text: fry

text: United Kingdom, Scotland

text: SS

text: Salmo salar

text: B

text: Salmo salar

text: 24h infected fry 1927, Family B, Genotype SS


text: IOA

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Atlantic salmon

text: fry

text: United Kingdom, Scotland

text: SS

text: Salmo salar

text: B

text: Salmo salar

text: 24h infected fry 1928, Family B, Genotype SS


text: IOA

text: public

text: Atlantic salmon

characteristic: common name

text: fry

characteristic: dev stage

text: United Kingdom, Scotland

text: SS

text: Salmo salar

characteristic: organism

text: B

text: Salmo salar

text: 24h infected fry 1962, Family B, Genotype SS


text: IOA

text: public

text: Atlantic salmon

text: fry

text: United Kingdom, Scotland

characteristic: geographic location (country and/or sea)

text: SS

characteristic: haplotype

text: Salmo salar

text: B

text: Salmo salar

text: 24h infected fry 1964, Family B, Genotype SS

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: IOA

text: public

text: Atlantic salmon

text: fry

text: United Kingdom, Scotland

text: SS

text: Salmo salar

text: B

characteristic: pop variant

text: Salmo salar

text: 24h infected fry 1965, Family B, Genotype SS


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IOA

text: public

text: Atlantic salmon

text: fry

text: United Kingdom, Scotland

text: RR

text: Salmo salar

text: C

text: Salmo salar

characteristic: timepoint

text: Control fry 1409, Family C, Genotype RR


text: IOA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Atlantic salmon

text: fry

text: United Kingdom, Scotland

text: RR

text: Salmo salar

text: C

text: Salmo salar

text: Control fry 1429, Family C, Genotype RR


text: IOA

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Atlantic salmon

text: fry

text: United Kingdom, Scotland

text: RR

text: Salmo salar

text: C

text: Salmo salar

text: Control fry 1435, Family C, Genotype RR


text: IOA

text: public

characteristic: anonymized name

text: Atlantic salmon

characteristic: common name

text: fry

characteristic: dev stage

text: United Kingdom, Scotland

text: RR

text: Salmo salar

text: C

text: Salmo salar

text: Control fry 1451, Family C, Genotype RR


text: IOA

text: public

text: Atlantic salmon

text: fry

text: United Kingdom, Scotland

characteristic: geographic location (country and/or sea)

text: RR

characteristic: haplotype

text: Salmo salar

characteristic: organism

text: C

text: Salmo salar

text: Control fry 1460, Family C, Genotype RR


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: CAM

text: public

text: Pst1 RAD wild-caught

characteristic: description

characteristic: latitude

characteristic: longitude

text: Heliconius erato emma

text: Heliconius erato emma

text: McMillan_Counterman NCS0819

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CAM

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Pst1 RAD wild-caught

text: Heliconius erato emma

text: Heliconius erato emma

text: McMillan_Counterman NCS0821


text: CAM

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Pst1 RAD wild-caught

text: Heliconius erato emma

text: Heliconius erato emma

text: McMillan_Counterman NCS0377


text: CAM

text: public

text: Pst1 RAD wild-caught

text: Heliconius erato emma

text: Heliconius erato emma

text: McMillan_Counterman NCS0378


text: CAM

text: public

text: Pst1 RAD wild-caught

text: Heliconius erato emma

text: Heliconius erato emma

text: McMillan_Counterman NCS0379


text: CAM

text: public

text: Pst1 RAD wild-caught

text: Heliconius erato emma

text: Heliconius erato emma

text: McMillan_Counterman NCS0380


text: CAM

text: public

text: Pst1 RAD wild-caught

text: Heliconius erato favorinus

text: Heliconius erato favorinus

text: McMillan_Counterman NCS0261


text: CAM

text: public

text: Pst1 RAD wild-caught

text: Heliconius erato favorinus

text: Heliconius erato favorinus

text: McMillan_Counterman NCS0268


text: CAM

text: public

text: Pst1 RAD wild-caught

text: Heliconius erato favorinus

text: Heliconius erato favorinus

text: McMillan_Counterman NCS0287


text: CAM

text: public

text: Pst1 RAD wild-caught

text: Heliconius erato favorinus

text: Heliconius erato favorinus

text: McMillan_Counterman NCS0290


text: CAM

text: public

text: Pst1 RAD wild-caught

text: Heliconius erato favorinus

text: Heliconius erato favorinus

text: McMillan_Counterman NCS0298


text: CAM

text: public

text: Pst1 RAD wild-caught

text: Heliconius erato favorinus

text: Heliconius erato favorinus

text: McMillan_Counterman NCS0312


text: CAM

text: public

text: Pst1 RAD wild-caught

text: Heliconius erato favorinus

text: Heliconius erato favorinus

text: McMillan_Counterman NCS0313


text: CAM

text: public

text: Pst1 RAD wild-caught

text: Heliconius erato favorinus

text: Heliconius erato favorinus

text: McMillan_Counterman NCS0468


text: CAM

text: public

text: Pst1 RAD wild-caught

text: Heliconius melpomene aglaope

text: Heliconius melpomene aglaope

text: McMillan_Counterman NCS0381


text: CAM

text: public

text: Pst1 RAD wild-caught

text: Heliconius melpomene aglaope

text: Heliconius melpomene aglaope

text: McMillan_Counterman NCS0383


text: CAM

text: public

text: Pst1 RAD wild-caught

text: Heliconius melpomene aglaope

text: Heliconius melpomene aglaope

text: McMillan_Counterman NCS0386


text: CAM

text: public

text: Pst1 RAD wild-caught

text: Heliconius melpomene aglaope

text: Heliconius melpomene aglaope

text: McMillan_Counterman NCS0371


text: UWEST

text: public

text: Oral

characteristic: body site

text: No

characteristic: chimera check

characteristic: collection date

text: Spiders

characteristic: environment (biome)

text: Venom gland

characteristic: environment (feature)

text: Venom

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Indian ornamental

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Customised Purelink gDNA kit

characteristic: nucleic acid extraction

text: Poecilotheria regalis

text: CCTACGGGAGGCAGCAG, ATTACCGCGGCTGCTGG

characteristic: pcr primers

text: Venom Microbiome

characteristic: project name

text: Poecilotheria regalis

text: Ion Torrent PGM 318 v1

characteristic: sequencing method

characteristic: target gene

characteristic: target subfragment

text: Poecilotheria regalis oral swab


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UWEST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Oral

characteristic: body site

text: No

characteristic: chimera check

characteristic: collection date

text: Snakes

text: Venom gland

text: Venom

text: host-associated

text: United Kingdom

text: Indian ornamental

text: mimarks-survey

text: Customised Purelink gDNA kit

text: Poecilotheria regalis

characteristic: organism

text: CCTACGGGAGGCAGCAG, ATTACCGCGGCTGCTGG

text: Venom Microbiome

text: Poecilotheria regalis

text: Ion Torrent PGM 318 v1

text: Poecilotheria regalis oral swab

characteristic: title


text: UWEST

text: public

text: Oral

text: No

text: puff adder

characteristic: common name

text: Snakes

characteristic: environment (biome)

text: Venom gland

characteristic: environment (feature)

text: Venom

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Puf adder

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Customised Purelink gDNA kit

characteristic: nucleic acid extraction

text: Bitis arietans

text: CCTACGGGAGGCAGCAG, ATTACCGCGGCTGCTGG

characteristic: pcr primers

text: Venom Microbiome

characteristic: project name

text: Bitis arietans

text: Ion Torrent PGM 318 v1

characteristic: sequencing method

characteristic: target gene

text: Bitis arietans oral swab


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UWEST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Oral

characteristic: body site

text: No

characteristic: chimera check

characteristic: collection date

text: salmon pink birdeater

text: Snakes

text: Venom gland

text: Venom

text: host-associated

text: United Kingdom

text: Salmon pink

text: mimarks-survey

text: Customised Purelink gDNA kit

text: Lasiodora parahybana

characteristic: organism

text: CCTACGGGAGGCAGCAG, ATTACCGCGGCTGCTGG

text: Venom Microbiome

text: Lasiodora parahybana

text: Ion Torrent PGM 318 v1

characteristic: target subfragment

text: Lasiodora parahybana oral swab

characteristic: title


text: UWEST

text: public

text: Oral

text: No

text: salmon pink birdeater

characteristic: common name

text: Spiders

characteristic: environment (biome)

text: Venom gland

characteristic: environment (feature)

text: Venom

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Salmon pink

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Customised Purelink gDNA kit

characteristic: nucleic acid extraction

text: Lasiodora parahybana

text: CCTACGGGAGGCAGCAG, ATTACCGCGGCTGCTGG

characteristic: pcr primers

text: Venom Microbiome

characteristic: project name

text: Lasiodora parahybana

text: Ion Torrent PGM 318 v1

characteristic: sequencing method

characteristic: target gene

text: Lasiodora parahybana oral swab


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UWEST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: oral

characteristic: body site

text: No

characteristic: chimera check

characteristic: collection date

text: spitting cobra

text: Snakes

text: Venom gland

text: Venom

text: host-associated

text: United Kingdom

text: Black-necked cobra

text: mimarks-survey

text: Customised Purelink gDNA kit

text: Naja nigricollis

characteristic: organism

text: CCTACGGGAGGCAGCAG, ATTACCGCGGCTGCTGG

text: Venom Microbiome

text: Naja nigricollis

text: Ion Torrent PGM 318 v1

characteristic: target subfragment

text: Naja nigricollis oral swab

characteristic: title