text: Negative

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: human

characteristic: description

text: Breast Cancer

text: IIB

text: Yes

text: Positive

text: TNBC

text: Homo sapiens

text: Positive

text: Homo sapiens

text: Illumina HiSeq 2000

text: Breast Tumor Tissue

characteristic: tissue


status: PUBLIC

text: Negative

tag: attribute

characteristic: Colletion date

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: age

text: human

characteristic: common name

text: Discovering driver mutations escalating the risk of distant metastasis in Korean breast cancers

text: Breast Cancer

characteristic: disease

text: I

characteristic: histological grade

text: Yes

characteristic: hormonal treatment

text: Positive

text: Luminal

characteristic: molecular subtype

text: Homo sapiens

characteristic: organism

text: Positive

text: Homo sapiens

text: Illumina HiSeq 2000

characteristic: sequencing method

text: Breast Tumor Tissue

characteristic: title


text: Positive

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: human

characteristic: description

text: Breast Cancer

text: IIA

text: Yes

text: Positive

text: Luminal

text: Homo sapiens

text: Positive

text: Homo sapiens

text: Illumina HiSeq 2000

text: Breast Tumor Tissue

characteristic: tissue


text: Negative

characteristic: Colletion date

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: human

text: Breast Cancer

text: IIA

text: Yes

text: Positive

text: Luminal

text: Homo sapiens

text: Negative

text: Homo sapiens

text: Illumina HiSeq 2000

text: Breast Tumor Tissue


text: Positive

text: public

characteristic: SRA accession

characteristic: age

text: human

characteristic: common name

text: Breast Cancer

characteristic: disease

text: I

characteristic: histological grade

text: No

characteristic: hormonal treatment

text: Positive

text: TNBC

text: Homo sapiens

text: Negative

text: Homo sapiens

text: Illumina HiSeq 2000

text: Breast Tumor Tissue


text: Positive

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: human

text: Breast Cancer

text: I

text: Yes

text: Positive

text: Luminal

characteristic: molecular subtype

text: Homo sapiens

characteristic: organism

text: Positive

text: Homo sapiens

text: Illumina HiSeq 2000

characteristic: sequencing method

text: Breast Tumor Tissue

characteristic: title


text: Positive

characteristic: Colletion date

characteristic: ENA-CHECKLIST

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: human

characteristic: description

text: Breast Cancer

text: I

text: No

text: Positive

text: TNBC

text: Homo sapiens

text: Positive

text: Homo sapiens

text: Illumina HiSeq 2000

text: Breast Tumor Tissue

characteristic: tissue


text: Negative

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: age

text: human

text: Breast Cancer

text: IIA

text: Yes

text: Positive

text: Luminal

text: Homo sapiens

text: Positive

text: Homo sapiens

text: Illumina HiSeq 2000

text: Breast Tumor Tissue


text: Positive

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: human

characteristic: common name

text: Breast Cancer

characteristic: disease

text: IIA

characteristic: histological grade

text: No

characteristic: hormonal treatment

text: Positive

text: TNBC

text: Homo sapiens

text: Negative

text: Homo sapiens

text: Illumina HiSeq 2000

text: Breast Tumor Tissue


text: Negative

characteristic: Colletion date

characteristic: ENA-CHECKLIST

text: public

text: human

text: Breast Cancer

text: Yes

text: Positive

text: Luminal

characteristic: molecular subtype

text: Homo sapiens

characteristic: organism

text: Negative

text: Homo sapiens

text: Illumina HiSeq 2000

characteristic: sequencing method

text: Breast Tumor Tissue

characteristic: title


text: Negative

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: human

characteristic: description

text: Breast Cancer

text: IIB

text: Yes

text: Positive

text: Luminal

text: Homo sapiens

text: Positive

text: Homo sapiens

text: Illumina HiSeq 2000

text: Breast Tumor Tissue

characteristic: tissue


text: Negative

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: age

text: human

text: Breast Cancer

text: IIA

text: No

text: Positive

text: Homo sapiens

text: Negative

text: Homo sapiens

text: Illumina HiSeq 2000

text: Breast Tumor Tissue


text: Negative

characteristic: Colletion date

characteristic: ENA-CHECKLIST

text: public

text: human

characteristic: common name

text: Breast Cancer

characteristic: disease

text: IIB

characteristic: histological grade

text: No

characteristic: hormonal treatment

text: Positive

text: Homo sapiens

text: Positive

text: Homo sapiens

text: Illumina HiSeq 2000

text: Breast Tumor Tissue


text: Positive

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

text: public

text: human

text: Breast Cancer

text: IIB

text: Yes

text: Positive

text: Luminal

characteristic: molecular subtype

text: Homo sapiens

characteristic: organism

text: Positive

text: Homo sapiens

text: Illumina HiSeq 2000

characteristic: sequencing method

text: Breast Tumor Tissue

characteristic: title


text: Positive

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: human

characteristic: description

text: Breast Cancer

text: IIB

text: Yes

text: Positive

text: Luminal

text: Homo sapiens

text: Negative

text: Homo sapiens

text: Illumina HiSeq 2000

text: Breast Tumor Tissue

characteristic: tissue


text: Positive

characteristic: Colletion date

characteristic: ENA-CHECKLIST

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: age

text: human

text: Breast Cancer

text: IIB

text: No

text: Positive

text: Non-luminal

text: Homo sapiens

text: Positive

text: Homo sapiens

text: Illumina HiSeq 2000

text: Breast Tumor Tissue


text: Positive

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

text: public

text: human

characteristic: common name

text: Breast Cancer

characteristic: disease

text: IIIA

characteristic: histological grade

text: No

characteristic: hormonal treatment

text: Positive

text: Non-luminal

text: Homo sapiens

text: Positive

text: Homo sapiens

text: Illumina HiSeq 2000

text: Breast Tumor Tissue


text: Negative

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: human

text: Breast Cancer

text: IIA

text: No

text: Positive

text: TNBC

characteristic: molecular subtype

text: Homo sapiens

characteristic: organism

text: Positive

text: Homo sapiens

text: Illumina HiSeq 2000

characteristic: sequencing method

text: Breast Tumor Tissue

characteristic: title


text: Positive

characteristic: Colletion date

characteristic: ENA-CHECKLIST

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: human

characteristic: description

text: Breast Cancer

text: IIA

text: No

text: Positive

text: TNBC

text: Homo sapiens

text: Positive

text: Homo sapiens

text: Illumina HiSeq 2000

text: Breast Tumor Tissue

characteristic: tissue


text: Negative

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: age

text: human

text: Breast Cancer

text: IIA

text: No

text: Positive

text: Homo sapiens

text: Positive

text: Homo sapiens

text: Illumina HiSeq 2000

text: Breast Tumor Tissue


text: Positive

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: human

characteristic: common name

text: Breast Cancer

characteristic: disease

text: IIIA

characteristic: histological grade

text: Yes

characteristic: hormonal treatment

text: Positive

text: Luminal

text: Homo sapiens

text: Positive

text: Homo sapiens

text: Illumina HiSeq 2000

text: Breast Tumor Tissue


text: Positive

characteristic: Colletion date

characteristic: ENA-CHECKLIST

text: public

text: human

text: Breast Cancer

text: IIIA

text: Yes

text: Positive

text: TNBC

characteristic: molecular subtype

text: Homo sapiens

characteristic: organism

text: Positive

text: Homo sapiens

text: Illumina HiSeq 2000

characteristic: sequencing method

text: Breast Tumor Tissue

characteristic: title


text: Positive

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: human

characteristic: description

text: Breast Cancer

text: IIA

text: No

text: Positive

text: Non-luminal

text: Homo sapiens

text: Positive

text: Homo sapiens

text: Illumina HiSeq 2000

text: Breast Tumor Tissue

characteristic: tissue


text: Negative

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: age

text: human

text: Breast Cancer

text: IIIA

text: No

text: Positive

text: TNBC

text: Homo sapiens

text: Positive

text: Homo sapiens

text: Illumina HiSeq 2000

text: Breast Tumor Tissue


text: Positive

characteristic: Colletion date

characteristic: ENA-CHECKLIST

text: public

text: human

characteristic: common name

text: Breast Cancer

characteristic: disease

text: IIIA

characteristic: histological grade

text: Yes

characteristic: hormonal treatment

text: Positive

text: Luminal

text: Homo sapiens

text: Negative

text: Homo sapiens

text: Illumina HiSeq 2000

text: Breast Tumor Tissue


text: Negative

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

text: public

text: human

text: Breast Cancer

text: No

text: Positive

text: TNBC

characteristic: molecular subtype

text: Homo sapiens

characteristic: organism

text: Negative

text: Homo sapiens

text: Illumina HiSeq 2000

characteristic: sequencing method

text: Breast Tumor Tissue

characteristic: title


text: Negative

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: human

characteristic: description

text: Breast Cancer

text: IIB

text: No

text: Positive

text: TNBC

text: Homo sapiens

text: Positive

text: Homo sapiens

text: Illumina HiSeq 2000

text: Breast Tumor Tissue

characteristic: tissue


characteristic: Colletion date

characteristic: ENA-CHECKLIST

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: age

text: human

text: Breast Cancer

text: TNBC

text: Homo sapiens

text: Homo sapiens

text: Illumina HiSeq 2000

text: Breast Tumor Tissue


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

text: public

text: human

characteristic: common name

text: Breast Cancer

characteristic: disease

text: Non-luminal

text: Homo sapiens

text: Homo sapiens

text: Illumina HiSeq 2000

text: Breast Tumor Tissue


text: public

text: human

text: Breast Cancer

text: Luminal

characteristic: molecular subtype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Illumina HiSeq 2000

characteristic: sequencing method

text: Breast Tumor Tissue

characteristic: title


mid-oesophagous 1

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF KONSTANZ

characteristic: INSDC last update

text: public

text: mid-oesophagous 1

tag: Namespace:UNIVERSITY OF KONSTANZ

characteristic: Submitter Id

text: Colubraria reticulata

text: Colubraria reticulata


characteristic: ENA-CHECKLIST

text: Swedish Museum of Natural History

text: public

tag: Namespace:Swedish Museum of Natural History

text: woolly mammoth

text: molar tooth from a woolly mammoth from Wrangel Island

characteristic: description

text: Mammuthus primigenius

text: Mammuthus primigenius

text: Wrangel


text: Swedish Museum of Natural History

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: woolly mammoth

text: soft tissue from a woolly mammoth from the Oimyakon district, NE Siberia

text: Mammuthus primigenius

text: Mammuthus primigenius

text: Oimyakon


mid-oesophagous 2

text: UNIVERSITY OF KONSTANZ

text: public

characteristic: SRA accession

text: mid-oesophagous 2

text: Colubraria reticulata

text: Colubraria reticulata


mid-oesophagous 3

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF KONSTANZ

text: public

text: mid-oesophagous 3

text: Colubraria reticulata

text: Colubraria reticulata


salivary glands 1

text: UNIVERSITY OF KONSTANZ

characteristic: INSDC center name

text: public

text: salivary glands 1

text: Colubraria reticulata

text: Colubraria reticulata


salivary glands 2

text: UNIVERSITY OF KONSTANZ

text: public

text: salivary glands 2

text: Colubraria reticulata

text: Colubraria reticulata


salivary glands 3

text: UNIVERSITY OF KONSTANZ

text: public

text: salivary glands 3

text: Colubraria reticulata

text: Colubraria reticulata


whole body 1

text: UNIVERSITY OF KONSTANZ

text: public

text: whole body 1

text: Colubraria reticulata

text: Colubraria reticulata


whole body 2

text: UNIVERSITY OF KONSTANZ

text: public

text: whole body 2

text: Colubraria reticulata

text: Colubraria reticulata


whole body 3

text: UNIVERSITY OF KONSTANZ

text: public

text: whole body 3

text: Colubraria reticulata

text: Colubraria reticulata


text: UC SANTA CRUZ

text: public

tag: Namespace:UC SANTA CRUZ

text: MinION sequencing run for MARC Phase Ia E. coli

text: Escherichia coli str. K-12 substr. MG1655

text: E. coli K12 MG1655

type: has member


text: CIDE

text: public

text: Plot 12

text: soil metagenome

text: soil metagenome

text: Sub-humid Mediterranean shrubland soil 1 day after fire


text: CIDE

text: public

text: Plot 13

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 14

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 15

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 16

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 17

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 18

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 19

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 20

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 21

text: soil metagenome

text: soil metagenome

text: Sub-humid Mediterranean shrubland soil 1 week after fire


text: CIDE

text: public

text: Plot 22

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 23

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 24

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 25

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 26

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 27

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 28

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 29

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 30

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 31

text: soil metagenome

text: soil metagenome

text: Sub-humid Mediterranean shrubland soil 1 month after fire


text: CIDE

text: public

text: Plot 32

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 33

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 34

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 35

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 36

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 37

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 38

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 39

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 40

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 41

text: soil metagenome

text: soil metagenome

text: Sub-humid Mediterranean shrubland soil 4.5 months after fire


text: CIDE

text: public

text: Plot 42

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 43

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 44

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 45

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 46

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 47

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 48

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 49

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 50

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 51

text: soil metagenome

text: soil metagenome

text: Sub-humid Mediterranean shrubland soil 9 months after fire


text: CIDE

text: public

text: Plot 52

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 53

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 54

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 55

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 56

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 57

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 58

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 59

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 61

text: soil metagenome

text: soil metagenome

text: Sub-humid Mediterranean shrubland soil 12 months after fir


text: CIDE

text: public

text: Plot 62

text: soil metagenome

text: soil metagenome

text: Sub-humid Mediterranean shrubland soil 12 months after fire


text: CIDE

text: public

text: Plot 63

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 64

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 65

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 66

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 67

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 68

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 69

text: soil metagenome

text: soil metagenome


text: CIDE

text: public

text: Plot 70

text: soil metagenome

text: soil metagenome


text: SLU

text: public

text: VpsA-PrrA-VpsB locus in Treponema phagedenis T 413

text: T 413

characteristic: isolate

text: Treponema phagedenis

text: Treponema phagedenis

text: T 413


text: SLU

text: public

text: VpsA-PrrA-VpsB locus in Treponema phagedenis T 551B

text: T 551B

text: Treponema phagedenis

text: Treponema phagedenis

text: T 551B


text: SLU

text: public

text: VpsA-PrrA-VpsB locus in Treponema phagedenis T 603

text: T 603

text: Treponema phagedenis

text: Treponema phagedenis

text: T 603


text: SLU

text: public

text: VpsA-PrrA-VpsB locus in Treponema phagedenis T 657

text: T 657

text: Treponema phagedenis

text: Treponema phagedenis

text: T 657


text: SLU

text: public

text: VpsA-PrrA-VpsB locus in Treponema phagedenis T 695

text: T 695

text: Treponema phagedenis

text: Treponema phagedenis

text: T 695


text: SLU

text: public

text: VpsA-PrrA-VpsB locus in Treponema phagedenis T 863

text: T 863

text: Treponema phagedenis

text: Treponema phagedenis

text: T 863


text: SLU

text: public

text: VpsA-PrrA-VpsB locus in Treponema phagedenis T 1089

text: T 1089

text: Treponema phagedenis

text: Treponema phagedenis

text: T 1089


text: SLU

text: public

text: VpsA-PrrA-VpsB locus in Treponema phagedenis T 1126

text: T 1126

text: Treponema phagedenis

text: Treponema phagedenis

text: T 1126


text: SLU

text: public

text: VpsA-PrrA-VpsB locus in Treponema phagedenis T 1138

text: T 1138

text: Treponema phagedenis

text: Treponema phagedenis

text: T 1138


text: SLU

text: public

text: VpsA-PrrA-VpsB locus in Treponema phagedenis T 1237

text: T 1237

text: Treponema phagedenis

text: Treponema phagedenis

text: T 1237


text: SLU

text: public

text: VpsA-PrrA-VpsB locus in Treponema phagedenis T 2378

text: T 2378

text: Treponema phagedenis

text: Treponema phagedenis

text: T 2378


text: SLU

text: public

text: VpsA-PrrA-VpsB locus in Treponema phagedenis V2

text: Treponema phagedenis

text: Treponema phagedenis


text: UNIVERSITY OF EDINBURGH

text: public

tag: Namespace:UNIVERSITY OF EDINBURGH

text: Roberta Bergero

characteristic: collected by

text: Silene latifolia

text: Silene latifolia

text: transcriptome sequencing


text: UNIVERSITY OF EDINBURGH

text: public

text: Silene latifolia

text: Silene latifolia

text: female leaf transcriptome


text: UNIVERSITY OF EDINBURGH

text: public

text: Silene latifolia

text: Silene latifolia

text: male leaf transcriptome


text: public

tag: Namespace:ZOOLOGY DEPARTMENT, UNIVERSITY OF OXFORD

text: Escherichia coli

text: Escherichia coli


text: UNIVERSITY OF EDINBURGH

text: public

text: transcriptome sequencing from bud flowers

text: Silene latifolia

text: Silene latifolia

text: maternal transcriptome


text: UNIVERSITY OF EDINBURGH

text: public

text: transcriptome sequencing (pool of F1 females) from bud flowers

text: Silene latifolia

text: Silene latifolia

text: pool of F1 females


text: UNIVERSITY OF EDINBURGH

text: public

text: transcriptome sequencing (pool of F1 males) from bud flowers

text: Silene latifolia

text: Silene latifolia

text: pool of F1 males


text: MPI-TUEBINGEN

text: public

text: thale cress

characteristic: common name

text: APO-treated seedlings, anti-H3ac antibody ChIP

text: 7-day old seedling

characteristic: dev stage

characteristic: ecotype

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: whole seedling

characteristic: tissue type


characteristic: ENA-LAST-UPDATE

text: MPI-TUEBINGEN

text: public

text: thale cress

text: control-treated seedlings, anti-H3ac antibody ChIP

text: 7-day old seedling

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: whole seedling

characteristic: title


characteristic: External Id

text: MPI-TUEBINGEN

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: thale cress

text: APO-treated seedlings, input DNA

text: 7-day old seedling

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: whole seedling


characteristic: ENA-CHECKLIST

text: MPI-TUEBINGEN

characteristic: INSDC first public

text: public

text: thale cress

text: TSA-treated seedlings, input DNA

characteristic: description

text: 7-day old seedling

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: whole seedling


characteristic: ENA-FIRST-PUBLIC

text: MPI-TUEBINGEN

text: public

characteristic: INSDC status

characteristic: SRA accession

text: thale cress

text: control-treated seedlings, input DNA

text: 7-day old seedling

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: whole seedling


APO

text: MPI-TUEBINGEN

characteristic: INSDC center name

text: public

text: APO

text: thale cress

text: APO-treated seedlings, transcriptomic analysis

text: 7-day old seedling

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: whole seedling

text: APO


TSA

text: MPI-TUEBINGEN

text: public

text: TSA

text: thale cress

characteristic: common name

text: TSA-treated seedlings, transcriptomic analysis

text: 7-day old seedling

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: whole seedling

text: TSA


SAHA

text: MPI-TUEBINGEN

text: public

text: SAHA

text: thale cress

text: SAHA-treated seedlings, transcriptomic analysis

text: 7-day old seedling

characteristic: dev stage

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: whole seedling

text: SAHA


CONTROL

text: MPI-TUEBINGEN

text: public

text: CONTROL

text: thale cress

text: control-treated seedlings, transcriptomic analysis

text: 7-day old seedling

characteristic: ecotype

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: whole seedling

text: CONTROL


E. coli K12 extraction2

text: WTCHG

text: public

text: E. coli K12 extraction2

text: Escherichia coli str. K-12 substr. MG1655

characteristic: reference URL

characteristic: reference id


characteristic: ENA-LAST-UPDATE

text: DUKE-NUS

text: public

characteristic: anonymized name

text: human

text: Fibroadenoma tumor tissue

text: Homo sapiens

characteristic: organism

text: Homo sapiens


characteristic: External Id

text: DUKE-NUS

characteristic: INSDC last update

text: public

text: human

text: Borderline phyllodes tumor

text: Homo sapiens

text: Homo sapiens

characteristic: title


characteristic: ENA-CHECKLIST

text: DUKE-NUS

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Sample 1166

text: human

text: Fibroadenoma tumor tissue

text: Homo sapiens

text: Homo sapiens


characteristic: ENA-FIRST-PUBLIC

text: DUKE-NUS

text: public

characteristic: INSDC status

text: human

text: Malignant phyllodes tumor

characteristic: description

text: Homo sapiens

text: Homo sapiens


text: DUKE-NUS

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: human

characteristic: common name

text: Benign phyllodes tumor

text: Homo sapiens

text: Homo sapiens


text: ED

text: public

text: pig

text: Sus scrofa

text: Sus scrofa


text: public

tag: Namespace:Institute of Health and Biomedical Innovation

text: In house sequencing ID: CtL2_S14

text: Chlamydia trachomatis 434/Bu

text: Chlamydia trachomatis 434/Bu

characteristic: serovar

characteristic: strain

text: 434/Bu L2 lab strain


characteristic: ENA-LAST-UPDATE

text: Institute of Health and Biomedical Innovation

text: public

text: 434/Bu spectinomycin resistant strain. In house sequencing ID: AL3_S11

text: Chlamydia trachomatis 434/Bu

text: Chlamydia trachomatis 434/Bu

text: 434/Bu L2 lab strain, spectinomycin resistant


text: public

text: 434/Bu trimethoprim resistant strain. In house sequencing ID: AL4_S12

text: Chlamydia trachomatis 434/Bu

text: Chlamydia trachomatis 434/Bu

text: 434/Bu L2 lab strain, trimethoprim resistant


text: public

text: In house sequencing ID: P370L_S16

text: Chlamydia trachomatis 434/Bu

text: Chlamydia trachomatis 434/Bu

text: HtrA mutant P370L


text: public

text: In house sequencing ID: AL6_S14

text: Chlamydia trachomatis 434/Bu

text: Chlamydia trachomatis 434/Bu

text: HtrA mutant A240V


text: public

text: In house sequencing ID: AL7_S15

text: Chlamydia trachomatis 434/Bu

text: Chlamydia trachomatis 434/Bu

text: HtrA mutant G475E


status: KILLED

text: UFMG

text: killed

text: T.cruzi 231 strain

text: Epimastigote

text: Brazil

characteristic: geographic location (country and/or sea)

text: Human

characteristic: host

text: Trypanosoma cruzi

text: Trypanosoma cruzi

text: 231 strain


characteristic: External Id

text: public

text: metagenome

characteristic: organism

text: metagenome

text: Synthetic metagenomes


marc_E_coli_K12_DSM 18039

text: ZF-screens B.V.

characteristic: INSDC last update

text: public

text: marc_E_coli_K12_DSM 18039

tag: Namespace:ZF-screens B.V.

characteristic: reference URL

characteristic: reference id


characteristic: ENA-CHECKLIST

text: URMITE

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Genome of Mycobacterium_tahitimassiliensis_MT11

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: tahitimassiliensis MT11

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: URMITE

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: tahitimassiliensis MT43


E-MTAB-3498:Culture Reference

text: public

characteristic: SRA accession

text: E-MTAB-3498:Culture Reference

tag: Namespace:Biochemistry and Molecular Biology Department, University of Southern Denmark, Odense, Denmark.

text: ArrayExpress

characteristic: broker name

text: Protocols: co-immunoprecipitation of flag -tagged Hfq protein and its bound RNA species was harvested using magnetic beads conjugated with anti-flag antibodies. The beads were washed stringently and bound RNA was eluted and used for cDNA library preperation. UTI89 was grown overnight in LB medium at 37degree C and then cultured statically at 37degree C in epilife cell culture medium without PD07i bladder epithelial cells for the duration of infection. This was used as the refernce. RNA was eluted from anti-flag antibody conjegated magnetic beads by phenol-chloroform extraction.. The RNA samples were poly(A)-tailed using poly(A) polymerase, followed by treatment with tobacco acid pyrophosphatase (TAP). Then a RNA adapter was ligated to the 5 prime-phosphate of the RNA Firststrand cDNA synthesis was performed using an oligo(dT)-adapter primer and M-MLV reverse transcriptase. The resulting cDNAs were PCR-amplified to about 20-60 ng/uI using a high fidelity DNA polymerase. PCR cycles performed and barcode sequences, which are integrated within the 3 prime sequencing adaptor.

characteristic: description

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli

text: Culture Reference


characteristic: ENA-LAST-UPDATE

text: Biochemistry and Molecular Biology Department, University of Southern Denmark, Odense, Denmark.

text: public

text: ArrayExpress

text: Protocols: co-immunoprecipitation of flag -tagged Hfq protein and its bound RNA species was harvested using magnetic beads conjugated with anti-flag antibodies. The beads were washed stringently and bound RNA was eluted and used for cDNA library preperation. UTI89 was grown overnight in LB medium at 37 degree C and used to infect a monolayer of bladder epithelial cell line PD07i. This was used as infection. RNA was eluted from anti-flag antibody conjegated magnetic beads by phenol-chloroform extraction.. The RNA samples were poly(A)-tailed using poly(A) polymerase, followed by treatment with tobacco acid pyrophosphatase (TAP). Then a RNA adapter was ligated to the 5 prime-phosphate of the RNA Firststrand cDNA synthesis was performed using an oligo(dT)-adapter primer and M-MLV reverse transcriptase. The resulting cDNAs were PCR-amplified to about 20-60 ng/uI using a high fidelity DNA polymerase. PCR cycles performed and barcode sequences, which are integrated within the 3 prime sequencing adaptor.

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli

characteristic: strain

text: Infection


characteristic: External Id

text: COLD SPRING HARBOR L

text: public

tag: Namespace:COLD SPRING HARBOR L

characteristic: sample name


characteristic: DO

text: UNIVERSITY OF WATERLOO

characteristic: INSDC last update

text: public

tag: Namespace:UNIVERSITY OF WATERLOO

text: 16S rRNA V3-V5 - SBR Sample - CAS Reactor, Full scaled activated sludge

text: bioreactor metagenome

characteristic: organism

characteristic: ph

text: CAS

characteristic: reactor

text: bioreactor metagenome

text: 16S V3-V5 SBR Sample


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF WATERLOO

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: 16S rRNA V3-V5 - SBR Sample - CAS Reactor, Good settling lab CAS flocs

text: bioreactor metagenome

text: CAS

text: bioreactor metagenome

text: 16S V3-V5 SBR Sample


characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF WATERLOO

characteristic: INSDC center name

text: public

text: 16S rRNA V3-V5 - SBR Sample - CAS Reactor, Filamentous bulking lab scale CAS flocs

text: bioreactor metagenome

text: CAS

text: bioreactor metagenome

text: 16S V3-V5 SBR Sample

characteristic: title


text: UNIVERSITY OF WATERLOO

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 16S rRNA V3-V5 - SBR Sample - CAS Reactor, Lab scale conventional activated granular sludge

text: bioreactor metagenome

text: CAS

text: bioreactor metagenome

text: 16S V3-V5 SBR Sample


characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF WATERLOO

text: public

text: 16S rRNA V3-V5 - SBR Sample - G-IFFAS Reactor, IFFAS flocs grown in aerobic conditions

characteristic: description

text: bioreactor metagenome

text: G-IFFAS

text: bioreactor metagenome

text: 16S V3-V5 SBR Sample


characteristic: External Id

text: UNIVERSITY OF WATERLOO

text: public

text: 16S rRNA V3-V5 - SBR Sample - G-IFFAS Reactor, Granules in IFFAS system

text: bioreactor metagenome

text: G-IFFAS

text: bioreactor metagenome

text: 16S V3-V5 SBR Sample


text: UNIVERSITY OF WATERLOO

text: public

text: 16S rRNA V3-V5 - SBR Sample - G-IFFAS Reactor, Granular sludge in IFFAS system

text: bioreactor metagenome

text: G-IFFAS

text: bioreactor metagenome

text: 16S V3-V5 SBR Sample


text: UNIVERSITY OF WATERLOO

text: public

text: 16S rRNA V3-V5 - SBR Sample - G-IFFAS Reactor,Granular sludge in IFFAS system

text: bioreactor metagenome

text: G-IFFAS

text: bioreactor metagenome

text: 16S V3-V5 SBR Sample


text: UNIVERSITY OF WATERLOO

text: public

text: 16S rRNA V3-V5 - SBR Sample - IFFAS Reactor, Mature biofilm from IFFAS system

text: bioreactor metagenome

text: IFFAS

text: bioreactor metagenome

text: 16S V3-V5 SBR Sample


text: UNIVERSITY OF WATERLOO

text: public

text: 16S rRNA V3-V5 - SBR Sample - IFFAS Reactor, Flocs from IFFAS system

text: bioreactor metagenome

text: IFFAS

text: bioreactor metagenome

text: 16S V3-V5 SBR Sample


text: UNIVERSITY OF WATERLOO

text: public

text: 16S rRNA V3-V5 - SBR Sample - IFFAS Reactor, Young biofilm from IFFAS system

text: bioreactor metagenome

text: IFFAS

text: bioreactor metagenome

text: 16S V3-V5 SBR Sample


text: UNIVERSITY OF WATERLOO

text: public

text: 16S rRNA V3-V5 - SBR Sample - IFFAS Reactor, Young flocs from IFFAS system

text: bioreactor metagenome

text: IFFAS

text: bioreactor metagenome

text: 16S V3-V5 SBR Sample


text: UNIVERSITY OF EAST ANGLIA, UK

text: public

tag: Namespace:UNIVERSITY OF EAST ANGLIA, UK

text: Escherichia coli str. K-12 substr. MG1655

characteristic: reference URL

characteristic: reference id


Colubraria transcriptome assembly

text: UNIVERSITY OF KONSTANZ

characteristic: INSDC last update

text: public

text: Colubraria transcriptome assembly

text: Colubraria reticulata

text: Colubraria reticulata

text: Colubraria transcriptome


text: MPI-TUEBINGEN

text: public

text: thale cress

characteristic: common name

text: TSA-treated seedlings, anti-H3ac antibody ChIP

text: 7-day old seedling

characteristic: dev stage

characteristic: ecotype

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: whole seedling

characteristic: tissue type


characteristic: ENA-CHECKLIST

text: UNIBE-IG

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: horse

text: Equus caballus

text: Equus caballus

text: A novel KIT variant in an Icelandic horse with white spotted coat colour


14035468_patient 1

characteristic: ENA-FIRST-PUBLIC

text: National Health Laboratory

characteristic: INSDC center name

text: public

text: 14035468_patient 1

tag: Namespace:National Health Laboratory

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14035468_patient 1

characteristic: title


14035468_patient 1_Run2

characteristic: ENA-LAST-UPDATE

text: National Health Laboratory

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 14035468_patient 1_Run2

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14035468_patient 1_Run2


14035470_patient 2

characteristic: External Id

text: National Health Laboratory

text: public

text: 14035470_patient 2

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14035470_patient 2


14035476_patient 3 & staff 1

text: National Health Laboratory

text: public

text: 14035476_patient 3 & staff 1

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14035476_patient 3 & staff 1


14035478_patient 4 & staff 2

text: National Health Laboratory

text: public

text: 14035478_patient 4 & staff 2

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14035478_patient 4 & staff 2


14035482_patient 5

text: National Health Laboratory

text: public

text: 14035482_patient 5

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14035482_patient 5


14035492_patient 6

text: National Health Laboratory

text: public

text: 14035492_patient 6

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14035492_patient 6


14035496_patient 7

text: National Health Laboratory

text: public

text: 14035496_patient 7

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14035496_patient 7


14035499_patient 8

text: National Health Laboratory

text: public

text: 14035499_patient 8

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14035499_patient 8


14035510_patient 9

text: National Health Laboratory

text: public

text: 14035510_patient 9

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14035510_patient 9


14035510_patient 9_Run2

text: National Health Laboratory

text: public

text: 14035510_patient 9_Run2

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14035510_patient 9_Run2


14035511_patient 10

text: National Health Laboratory

text: public

text: 14035511_patient 10

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14035511_patient 10


14036369_staff 3

text: National Health Laboratory

text: public

text: 14036369_staff 3

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036369_staff 3


14036369_staff 3_Run2

text: National Health Laboratory

text: public

text: 14036369_staff 3_Run2

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036369_staff 3_Run2


14036442_staff 4

text: National Health Laboratory

text: public

text: 14036442_staff 4

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036442_staff 4


14036448A_staff 5

text: National Health Laboratory

text: public

text: 14036448A_staff 5

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036448A_staff 5


14036452_staff 6

text: National Health Laboratory

text: public

text: 14036452_staff 6

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036452_staff 6


14036452_staff 6_Run2

text: National Health Laboratory

text: public

text: 14036452_staff 6_Run2

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036452_staff 6_Run2


14036462_staff 7

text: National Health Laboratory

text: public

text: 14036462_staff 7

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036462_staff 7


14036462_staff 7_Run2

text: National Health Laboratory

text: public

text: 14036462_staff 7_Run2

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036462_staff 7_Run2


14036462_staff 7_Run3

text: National Health Laboratory

text: public

text: 14036462_staff 7_Run3

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036462_staff 7_Run3


14036504_staff 8

text: National Health Laboratory

text: public

text: 14036504_staff 8

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036504_staff 8


14036507_staff 9

text: National Health Laboratory

text: public

text: 14036507_staff 9

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036507_staff 9


14036507_staff 9_Run2

text: National Health Laboratory

text: public

text: 14036507_staff 9_Run2

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036507_staff 9_Run2


14036507_staff 9_Run3

text: National Health Laboratory

text: public

text: 14036507_staff 9_Run3

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036507_staff 9_Run3


14036509_staff 10

text: National Health Laboratory

text: public

text: 14036509_staff 10

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036509_staff 10


14036509_staff 10_Run2

text: National Health Laboratory

text: public

text: 14036509_staff 10_Run2

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036509_staff 10_Run2


14036510_staff 11

text: National Health Laboratory

text: public

text: 14036510_staff 11

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036510_staff 11


14036510_staff 11_Run2

text: National Health Laboratory

text: public

text: 14036510_staff 11_Run2

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036510_staff 11_Run2


14036510_staff 11_Run3

text: National Health Laboratory

text: public

text: 14036510_staff 11_Run3

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036510_staff 11_Run3


14036511_staff 12

text: National Health Laboratory

text: public

text: 14036511_staff 12

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036511_staff 12


14036512_staff 13

text: National Health Laboratory

text: public

text: 14036512_staff 13

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036512_staff 13


14036512_staff 13_Run2

text: National Health Laboratory

text: public

text: 14036512_staff 13_Run2

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036512_staff 13_Run2


14036515_staff 14

text: National Health Laboratory

text: public

text: 14036515_staff 14

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036515_staff 14


14036515_staff 14_Run2

text: National Health Laboratory

text: public

text: 14036515_staff 14_Run2

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036515_staff 14_Run2


14036515_staff 14_Run3

text: National Health Laboratory

text: public

text: 14036515_staff 14_Run3

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036515_staff 14_Run3


14036518_staff 15

text: National Health Laboratory

text: public

text: 14036518_staff 15

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036518_staff 15


14036518_staff 15_Run2

text: National Health Laboratory

text: public

text: 14036518_staff 15_Run2

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036518_staff 15_Run2


14036518_staff 15_Run3

text: National Health Laboratory

text: public

text: 14036518_staff 15_Run3

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036518_staff 15_Run3


14036519_staff 16

text: National Health Laboratory

text: public

text: 14036519_staff 16

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036519_staff 16


14036519_staff 16_Run2

text: National Health Laboratory

text: public

text: 14036519_staff 16_Run2

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036519_staff 16_Run2


14036519_staff 16_Run3

text: National Health Laboratory

text: public

text: 14036519_staff 16_Run3

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036519_staff 16_Run3


14036519_staff 16_Run4

text: National Health Laboratory

text: public

text: 14036519_staff 16_Run4

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036519_staff 16_Run4


14036519_staff 16_Run5

text: National Health Laboratory

text: public

text: 14036519_staff 16_Run5

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036519_staff 16_Run5


14036520_staff 17

text: National Health Laboratory

text: public

text: 14036520_staff 17

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036520_staff 17


14036520_staff 17_Run2

text: National Health Laboratory

text: public

text: 14036520_staff 17_Run2

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036520_staff 17_Run2


14036520_staff 17_Run3

text: National Health Laboratory

text: public

text: 14036520_staff 17_Run3

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036520_staff 17_Run3


14036524A_staff 18

text: National Health Laboratory

text: public

text: 14036524A_staff 18

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036524A_staff 18


14036524B_staff 18

text: National Health Laboratory

text: public

text: 14036524B_staff 18

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036524B_staff 18


14036525_staff 19

text: National Health Laboratory

text: public

text: 14036525_staff 19

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036525_staff 19


14036525_staff 19_Run2

text: National Health Laboratory

text: public

text: 14036525_staff 19_Run2

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036525_staff 19_Run2


14036527_staff 20

text: National Health Laboratory

text: public

text: 14036527_staff 20

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14036527_staff 20


14037200_staff 21

text: National Health Laboratory

text: public

text: 14037200_staff 21

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14037200_staff 21


14037200_staff 21_Run2

text: National Health Laboratory

text: public

text: 14037200_staff 21_Run2

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14037200_staff 21_Run2


14037200_staff 21_Run3

text: National Health Laboratory

text: public

text: 14037200_staff 21_Run3

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14037200_staff 21_Run3


14037201_staff 22

text: National Health Laboratory

text: public

text: 14037201_staff 22

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14037201_staff 22


14037201_staff 22_Run2

text: National Health Laboratory

text: public

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text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14037201_staff 22_Run2


14037201_staff 22_Run3

text: National Health Laboratory

text: public

text: 14037201_staff 22_Run3

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14037201_staff 22_Run3


14037202_staff 23

text: National Health Laboratory

text: public

text: 14037202_staff 23

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14037202_staff 23


14037202_staff 23_Run2

text: National Health Laboratory

text: public

text: 14037202_staff 23_Run2

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14037202_staff 23_Run2


14037202_staff 23_Run3

text: National Health Laboratory

text: public

text: 14037202_staff 23_Run3

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 14037202_staff 23_Run3


1908A_shiitake mushrooms

text: National Health Laboratory

text: public

text: 1908A_shiitake mushrooms

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 1908A_shiitake mushrooms


1908A_shiitake mushrooms_Run2

text: National Health Laboratory

text: public

text: 1908A_shiitake mushrooms_Run2

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 1908A_shiitake mushrooms_Run2


1909B_cooked asparagus

text: National Health Laboratory

text: public

text: 1909B_cooked asparagus

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 1909B_cooked asparagus


1909B_cooked asparagus_Run2

text: National Health Laboratory

text: public

text: 1909B_cooked asparagus_Run2

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 1909B_cooked asparagus_Run2


1909B_cooked asparagus_Run3

text: National Health Laboratory

text: public

text: 1909B_cooked asparagus_Run3

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 1909B_cooked asparagus_Run3


1910B_cured ham buffet

text: National Health Laboratory

text: public

text: 1910B_cured ham buffet

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 1910B_cured ham buffet


1911_cooked ham buffet

text: National Health Laboratory

text: public

text: 1911_cooked ham buffet

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 1911_cooked ham buffet


1911_cooked ham buffet_Run2

text: National Health Laboratory

text: public

text: 1911_cooked ham buffet_Run2

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 1911_cooked ham buffet_Run2


1911_cooked ham buffet_Run3

text: National Health Laboratory

text: public

text: 1911_cooked ham buffet_Run3

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 1911_cooked ham buffet_Run3


1911_cooked ham buffet_Run4

text: National Health Laboratory

text: public

text: 1911_cooked ham buffet_Run4

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 1911_cooked ham buffet_Run4


1911_cooked ham buffet_Run5

text: National Health Laboratory

text: public

text: 1911_cooked ham buffet_Run5

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 1911_cooked ham buffet_Run5


1913A_Floating island

text: National Health Laboratory

text: public

text: 1913A_Floating island

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 1913A_Floating island


1913A_Floating island_Run2

text: National Health Laboratory

text: public

text: 1913A_Floating island_Run2

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 1913A_Floating island_Run2


KLF_Swiss boyscout outbreak 2010

text: National Health Laboratory

text: public

text: KLF_Swiss boyscout outbreak 2010

text: Staphylococcus aureus

text: Staphylococcus aureus

text: KLF_Swiss boyscout outbreak 2010


KLF_Swiss boyscout outbreak 2010_Run2

text: National Health Laboratory

text: public

text: KLF_Swiss boyscout outbreak 2010_Run2

text: Staphylococcus aureus

text: Staphylococcus aureus

text: KLF_Swiss boyscout outbreak 2010_Run2


1972_cured ham kitchen

text: National Health Laboratory

text: public

text: 1972_cured ham kitchen

text: Staphylococcus aureus

text: Staphylococcus aureus

text: 1972_cured ham kitchen


Cambisol

text: FRIEDRICH SCHILLER UNIVERSITY JENA

text: public

text: Cambisol

tag: Namespace:FRIEDRICH SCHILLER UNIVERSITY JENA

text: Felix Mingo

characteristic: collected by

text: Cambisol sampled from deciduous forest.

characteristic: description

text: Germany

characteristic: geographic location (country and/or sea)

text: Soil (cambisol)

characteristic: isolation source

text: 50°51'57.12N, 11°43'0.11E

characteristic: lat lon

text: mixed culture metagenome

text: mixed culture metagenome

text: Cambisol


Luvisol

text: FRIEDRICH SCHILLER UNIVERSITY JENA

characteristic: INSDC last update

text: public

text: Luvisol

text: Felix Mingo

text: Luvisol sampled from deciduous forest.

text: Germany

text: Soil (luvisol)

text: 50°59'33.64N, 11°42'39.97E

text: mixed culture metagenome

characteristic: organism

text: mixed culture metagenome

text: Luvisol


Gleysol

characteristic: ENA-CHECKLIST

text: FRIEDRICH SCHILLER UNIVERSITY JENA

text: public

text: Gleysol

text: Felix Mingo

text: Gleysol sampled from coniferous forest.

text: Germany

text: Soil (gleysol)

text: 50°54'54.18N, 11°51'20.83E

text: mixed culture metagenome

text: mixed culture metagenome

text: Gleysol


Pelosol

text: FRIEDRICH SCHILLER UNIVERSITY JENA

characteristic: INSDC first public

text: public

text: Pelosol

text: Felix Mingo

text: Pelosol sampled from a grassland site.

text: Germany

text: Soil (pelosol)

text: 50°55'50.11N, 11°37'39.28E

text: mixed culture metagenome

text: mixed culture metagenome

text: Pelosol


Podsol

text: FRIEDRICH SCHILLER UNIVERSITY JENA

text: public

text: Podsol

characteristic: Submitter Id

text: Felix Mingo

text: Podsol sampled from coniferous forest.

text: Germany

text: Soil (cambisol)

text: 50°47'34.78N, 11°39'42.16E

text: mixed culture metagenome

text: mixed culture metagenome

text: Podsol


Cambisol syr/thio (1)

characteristic: ENA-FIRST-PUBLIC

text: FRIEDRICH SCHILLER UNIVERSITY JENA

text: public

text: Cambisol syr/thio (1)

text: Felix Mingo

text: Intermediate sub-cultivation of the cambisol enrichment culture amended with syringate/thiosulfate.

text: Germany

text: Enrichment culture

text: mixed culture metagenome

text: mixed culture metagenome

text: Cambisol syr/thio (1)


Cambisol syr/thio (2)

text: FRIEDRICH SCHILLER UNIVERSITY JENA

characteristic: INSDC center name

text: public

text: Cambisol syr/thio (2)

text: Felix Mingo

text: Final sub-cultivation of the cambisol enrichment culture amended with syringate/thiosulfate.

text: Germany

text: Enrichment culture

text: mixed culture metagenome

text: mixed culture metagenome

text: Cambisol syr/thio (2)


Cambisol syr/Cl-OHPA (1)

text: FRIEDRICH SCHILLER UNIVERSITY JENA

text: public

text: Cambisol syr/Cl-OHPA (1)

text: Felix Mingo

text: Intermediate sub-cultivation of the cambisol enrichment culture amended with syringate/Cl-OHPA.

text: Germany

text: Enrichment culture

text: mixed culture metagenome

text: mixed culture metagenome

text: Cambisol syr/Cl-OHPA (1)

characteristic: title


Cambisol syr/Cl-OHPA (2)

characteristic: ENA-LAST-UPDATE

text: FRIEDRICH SCHILLER UNIVERSITY JENA

text: public

text: Cambisol syr/Cl-OHPA (2)

text: Felix Mingo

text: Final sub-cultivation of the cambisol enrichment culture amended with syringate/Cl-OHPA.

text: Germany

text: Enrichment culture

text: mixed culture metagenome

text: mixed culture metagenome

text: Cambisol syr/Cl-OHPA (2)


Cambisol syr/2,4,6-TCP (1)

text: FRIEDRICH SCHILLER UNIVERSITY JENA

text: public

characteristic: INSDC status

text: Cambisol syr/2,4,6-TCP (1)

text: Felix Mingo

text: Intermediate sub-cultivation of the cambisol enrichment culture amended with syringate/2,4,6-TCP.

text: Germany

text: Enrichment culture

text: mixed culture metagenome

text: mixed culture metagenome

text: Cambisol syr/2,4,6-TCP (1)


Cambisol syr/2,4,6-TCP (2)

text: FRIEDRICH SCHILLER UNIVERSITY JENA

text: public

characteristic: SRA accession

text: Cambisol syr/2,4,6-TCP (2)

text: Felix Mingo

text: Final sub-cultivation of the cambisol enrichment culture amended with syringate/2,4,6-TCP.

text: Germany

text: Enrichment culture

text: mixed culture metagenome

text: mixed culture metagenome

text: Cambisol syr/2,4,6-TCP (2)


Cambisol syr (1)

characteristic: External Id

text: FRIEDRICH SCHILLER UNIVERSITY JENA

text: public

text: Cambisol syr (1)

text: Felix Mingo

text: Intermediate sub-cultivation of the cambisol enrichment culture amended with syringate.

text: Germany

text: Enrichment culture

text: mixed culture metagenome

text: mixed culture metagenome

text: Cambisol syr (1)


Cambisol syr (2)

text: FRIEDRICH SCHILLER UNIVERSITY JENA

text: public

text: Cambisol syr (2)

text: Felix Mingo

characteristic: collected by

text: Final sub-cultivation of the cambisol enrichment culture amended with syringate.

text: Germany

text: Enrichment culture

text: mixed culture metagenome

text: mixed culture metagenome

text: Cambisol syr (2)


Luvisol syr/thio (1)

text: FRIEDRICH SCHILLER UNIVERSITY JENA

text: public

text: Luvisol syr/thio (1)

text: Felix Mingo

text: Intermediate sub-cultivation of the luvisol enrichment culture amended with syringate/thiosulfate.

characteristic: description

text: Germany

text: Enrichment culture

text: mixed culture metagenome

text: mixed culture metagenome

text: Luvisol syr/thio (1)


Luvisol syr/thio (2)

text: FRIEDRICH SCHILLER UNIVERSITY JENA

text: public

text: Luvisol syr/thio (2)

text: Felix Mingo

text: Final sub-cultivation of the luvisol enrichment culture amended with syringate/thiosulfate.

text: Germany

characteristic: geographic location (country and/or sea)

text: Enrichment culture

text: mixed culture metagenome

text: mixed culture metagenome

text: Luvisol syr/thio (2)


Gleysol syr/thio (1)

text: FRIEDRICH SCHILLER UNIVERSITY JENA

text: public

text: Gleysol syr/thio (1)

text: Felix Mingo

text: Intermediate sub-cultivation of the gleysol enrichment culture amended with syringate/thiosulfate.

text: Germany

text: Enrichment culture

characteristic: isolation source

text: mixed culture metagenome

text: mixed culture metagenome

text: Gleysol syr/thio (1)


Gleysol syr/thio (2)

text: FRIEDRICH SCHILLER UNIVERSITY JENA

text: public

text: Gleysol syr/thio (2)

text: Felix Mingo

text: Final sub-cultivation of the gleysol enrichment culture amended with syringate/thiosulfate.

text: Germany

text: Enrichment culture

text: mixed culture metagenome

text: mixed culture metagenome

text: Gleysol syr/thio (2)


Pelosol syr/thio (1)

text: FRIEDRICH SCHILLER UNIVERSITY JENA

text: public

text: Pelosol syr/thio (1)

text: Felix Mingo

text: Intermediate sub-cultivation of the pelosol enrichment culture amended with syringate/thiosulfate.

text: Germany

text: Enrichment culture

text: mixed culture metagenome

text: mixed culture metagenome

text: Pelosol syr/thio (1)


Pelosol syr/thio (2)

text: FRIEDRICH SCHILLER UNIVERSITY JENA

text: public

text: Pelosol syr/thio (2)

text: Felix Mingo

text: Final sub-cultivation of the pelosol enrichment culture amended with syringate/thiosulfate.

text: Germany

text: Enrichment culture

text: mixed culture metagenome

text: mixed culture metagenome

text: Pelosol syr/thio (2)


Podsol syr/thio (1)

text: FRIEDRICH SCHILLER UNIVERSITY JENA

text: public

text: Podsol syr/thio (1)

text: Felix Mingo

text: Intermediate sub-cultivation of the podsol enrichment culture amended with syringate/thiosulfate.

text: Germany

text: Enrichment culture

text: mixed culture metagenome

text: mixed culture metagenome

text: Podsol syr/thio (1)


Podsol syr/thio (2)

text: FRIEDRICH SCHILLER UNIVERSITY JENA

text: public

text: Podsol syr/thio (2)

text: Felix Mingo

text: Final sub-cultivation of the podsol enrichment culture amended with syringate/thiosulfate.

text: Germany

text: Enrichment culture

text: mixed culture metagenome

text: mixed culture metagenome

text: Podsol syr/thio (2)


text: public

tag: Namespace:HZI - HELMHOLTZ CENTRE FOR INFECTION RESEARCH, BRAUNSCHWEIG, GERMANY

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens


text: HZI - HELMHOLTZ CENTRE FOR INFECTION RESEARCH, BRAUNSCHWEIG, GERMANY

characteristic: INSDC last update

text: public

text: human

text: Homo sapiens

text: Homo sapiens


text: WTCHG

text: public

text: human

text: Unaffected mother of female with craniosynostosis, AW_CRS_4103

text: Unaffected

characteristic: disease status

text: Mother of AW_CRS_4103

characteristic: familial relationship

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: female

characteristic: sex

text: Human DNA sample


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: WTCHG

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: human

text: Unaffected father of female with craniosynostosis, AW_CRS_4103

text: Unaffected

text: Father of AW_CRS_4103

text: Homo sapiens

text: Homo sapiens

text: male

text: Human DNA sample


characteristic: ENA-LAST-UPDATE

text: WTCHG

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: human

text: Female affected with craniosynostosis; daughter of AW_CRS_1631 and AW_CRS_1632

text: Affected with craniosynostosis

text: Daughter of AW_CRS_1631 and AW_CRS_1632Daughter of

text: Homo sapiens

text: Homo sapiens

text: female

text: Human DNA sample

characteristic: title


characteristic: External Id

text: WTCHG

text: public

characteristic: SRA accession

text: human

text: Unaffected father of male with craniosynostosis, AW_CRS_4917

characteristic: description

text: Unaffected

text: Father of AW_CRS_4917

text: Homo sapiens

text: Homo sapiens

text: male

text: Human DNA sample


text: WTCHG

text: public

text: human

characteristic: common name

text: Unaffected mother of male with craniosynostosis, AW_CRS_4917

text: Unaffected

text: Mother of AW_CRS_4917

text: Homo sapiens

text: Homo sapiens

text: female

text: Human DNA sample


text: WTCHG

characteristic: INSDC last update

text: public

text: human

text: Male affected with craniosynostosis; son of AW_CRS_1806 and AW_CRS_1807

text: Affected with craniosynostosis

text: Son of AW_CRS_1806 and AW_CRS_1807

text: Homo sapiens

text: Homo sapiens

text: male

text: Human DNA sample


text: WTCHG

text: public

text: human

text: Unaffected mother of female with craniosynostosis, AW_SC_4659

text: Unaffected

characteristic: disease status

text: Mother of AW_SC_4659

text: Homo sapiens

text: Homo sapiens

text: female

text: Human DNA sample


text: WTCHG

text: public

text: human

text: Unaffected father of female with craniosynostosis, AW_SC_4659

text: Unaffected

text: Father of AW_SC_4659

characteristic: familial relationship

text: Homo sapiens

text: Homo sapiens

text: male

text: Human DNA sample


text: MPI-EVA

text: public

text: human

text: Nuclear and mitochondrial genome sequence from the Oase1 sample found in Peştera cu Oase, Romania. A full description of the sample is found in: Trinkaus, E. et al PNAS 2003 100 (20) 11231-11236; doi:10.1073/pnas.2035108100

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: male

characteristic: specimen voucher

text: bone

characteristic: tissue type

text: Oase1 ancient DNA


characteristic: ENA-CHECKLIST

text: UFMG

text: killed

text: Trypanosoma cruzi 231rod strain

text: Epimastigote

text: Brazil

characteristic: geographic location (country and/or sea)

text: Human

characteristic: host

text: Trypanosoma cruzi

text: Trypanosoma cruzi

characteristic: strain


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SLU

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Bintje

characteristic: cultivar

text: Spongospora subterranea field isolate, extracted from potato root galls.

text: sweden

text: Solanum tuberosum

text: root galls

characteristic: isolation source

text: Solanum tuberosum

characteristic: lab host

text: Spongospora subterranea

text: Spongospora subterranea

text: Spongospora subterranea field isolate


characteristic: External Id

text: Austrian Institute of Technology (AIT)

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Austrian Institute of Technology (AIT)

text: ArrayExpress

characteristic: broker name

text: Protocols: Burkholderia phytofirmans PsJN colonizing potato (Solanum tuberosum L.) plants From the rRNA depleted RNA samples, plant mRNA molecules were removed with oligo(dT) magnetic beads. The poly(A)-minus RNA species were poly(A)-tailed using poly(A) polymerase and the RNA species which carry a 5' mono-phosphate were degraded with Terminator exonuclease (Epicentre). The samples were then treated with RNA 5' polyphosphatase (Epicentre) to degrade 5'PPP ends to 5'P. Afterwards, an RNA adapter was ligated to the 5'-phosphate of the RNA fragments. First-strand cDNA synthesis was performed using an oligo(dT)-adapter primer and M-MLV reverse transcriptase. The resulting cDNA was PCR-amplified to about 20-30 ng/μl using a high fidelity DNA polymerase . The barcode sequences which are part of the 3' sequencing adapter are included in Table 2. The cDNA was purified using the Agencourt AMPure XP kit (Beckman Coulter Genomics) and analyzed by capillary electrophoresis.

characteristic: description

text: control

characteristic: environmental stress

text: Burkholderia phytofirmans

text: Burkholderia phytofirmans

text: Burkholderia phytofirmans

text: PsJN

text: 0 hour

characteristic: time

text: Control

characteristic: title


name: E-MTAB-3524:Twelve hours under drought stress

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Austrian Institute of Technology (AIT)

text: public

text: ArrayExpress

text: drought

text: Burkholderia phytofirmans

characteristic: organism

text: Burkholderia phytofirmans

text: Burkholderia phytofirmans

text: PsJN

characteristic: strain

text: 12 hour

text: Twelve hours under drought stress


name: E-MTAB-3524:Six hours under drought stress

characteristic: ENA-LAST-UPDATE

text: Austrian Institute of Technology (AIT)

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: ArrayExpress

text: drought

text: Burkholderia phytofirmans

text: Burkholderia phytofirmans

text: Burkholderia phytofirmans

text: PsJN

text: 6 hour

text: Six hours under drought stress


name: E-MTAB-3524:One hour under drought stress

characteristic: External Id

text: Austrian Institute of Technology (AIT)

text: public

text: ArrayExpress

text: drought

text: Burkholderia phytofirmans

text: Burkholderia phytofirmans

text: Burkholderia phytofirmans

text: PsJN

text: 1 hour

text: One hour under drought stress


text: James Hutton Institute

characteristic: INSDC last update

text: public

tag: Namespace:James Hutton Institute

text: Nematodes were on Botrytis cinerea and Barley seeds

characteristic: bio material

text: pine wood nematode

characteristic: common name

text: Fungal feeding, replicate one

text: mixed life stages (juveniles, female and males)

characteristic: dev stage

text: Portugal

characteristic: geographic location (country and/or sea)

characteristic: isolate

text: Laboratório de Nematologia-ICAAM, Universidade de Évora

characteristic: lab host

text: Bursaphelenchus xylophilus

text: Bursaphelenchus xylophilus

text: Bursaphelenchus xylophilus

characteristic: sub species


tag: attribute

characteristic: ENA-CHECKLIST

text: James Hutton Institute

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pine wood nematode

text: Fungal feeding, replicate three

characteristic: description

text: Portugal

text: Bursaphelenchus xylophilus

text: Bursaphelenchus xylophilus

text: Bursaphelenchus xylophilus

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: James Hutton Institute

characteristic: INSDC center name

text: public

text: Nematodes were collected from maritime pine seedlings, after 6 days post infection

text: pine wood nematode

text: Six days post infection, replicate one

text: Portugal

text: maritime pine tree (Pinus pinaster)

characteristic: host

text: Bursaphelenchus xylophilus

characteristic: organism

text: Bursaphelenchus xylophilus

text: Bursaphelenchus xylophilus


characteristic: External Id

text: James Hutton Institute

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

characteristic: bio material

text: pine wood nematode

text: Six days post infection, replicate two

text: Portugal

text: maritime pine tree (Pinus pinaster)

text: Bursaphelenchus xylophilus

text: Bursaphelenchus xylophilus

text: Bursaphelenchus xylophilus


text: James Hutton Institute

text: public

text: pine wood nematode

characteristic: common name

text: Six days post infection, replicate three

characteristic: dev stage

text: Portugal

characteristic: geographic location (country and/or sea)

text: maritime pine tree (Pinus pinaster)

characteristic: isolate

characteristic: lab host

text: Bursaphelenchus xylophilus

text: Bursaphelenchus xylophilus

text: Bursaphelenchus xylophilus


characteristic: ENA-CHECKLIST

text: James Hutton Institute

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Nematodes were collected from maritime pine seedlings 15 days post infection

text: pine wood nematode

text: Fifteen days post infection, replicate one

characteristic: description

text: Portugal

text: maritime pine tree (Pinus pinaster)

text: Bursaphelenchus xylophilus

text: Bursaphelenchus xylophilus

text: Bursaphelenchus xylophilus

characteristic: sub species


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: James Hutton Institute

characteristic: INSDC center name

text: public

text: pine wood nematode

text: Fifteen days post infection, replicate two

text: Portugal

text: maritime pine tree (Pinus pinaster)

characteristic: host

text: Bursaphelenchus xylophilus

text: Bursaphelenchus xylophilus

text: Bursaphelenchus xylophilus

characteristic: title


characteristic: External Id

text: James Hutton Institute

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: pine wood nematode

text: Fifteen days post infection, replicate three

text: Portugal

text: maritime pine tree (Pinus pinaster)

text: Bursaphelenchus xylophilus

characteristic: organism

text: Bursaphelenchus xylophilus

text: Bursaphelenchus xylophilus


text: UFMG

text: public

text: Epimastigote

characteristic: dev stage

text: Brazil

characteristic: geographic location (country and/or sea)

text: Human

text: Trypanosoma cruzi

text: Trypanosoma cruzi

characteristic: strain


characteristic: ENA-CHECKLIST

text: KIS

text: public

characteristic: INSDC status

text: human

characteristic: common name

text: Mapped BAM files, Ion Proton exome sequencing.

text: Homo sapiens

text: Homo sapiens

text: BAM files exome sequencing Hans Matsson 2015


CHO-K1 FCS

text: TUG

text: public

characteristic: SRA accession

text: CHO-K1 FCS

text: Chinese hamster

text: Original CHO cell line as deposited at ECACC and grown in standard medium containing 5% FCS

characteristic: description

text: Cricetulus griseus

text: Cricetulus griseus

text: CHO-K1 FCS


CHO-K1 8mM Gln MCB exponential

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: TUG

text: public

text: CHO-K1 8mM Gln MCB exponential

text: Chinese hamster

text: CHO-K1, gDNA mid exponential. CHO-K1 FCS adapted to growth in protein free, chemically defined medium in suspension, samples taken within 2 weeks of thawing

text: Cricetulus griseus

text: Cricetulus griseus

text: CHO-K1 8mM Gln MCB exponential


CHO-K1 8mM Gln MCB stationary

text: TUG

characteristic: INSDC center name

text: public

text: CHO-K1 8mM Gln MCB stationary

text: Chinese hamster

text: CHO-K1, gDNA stationary. CHO-K1 FCS adapted to growth in protein free, chemically defined medium in suspension

text: Cricetulus griseus

text: Cricetulus griseus

text: CHO-K1 8mM Gln MCB stationary


CHO-K1 8mM Gln 6months

text: TUG

text: public

text: CHO-K1 8mM Gln 6months

text: Chinese hamster

text: CHO-K1 8mM Gln after 6 months in culture: this sample will serve to assess changes in genome and methylome that occur over time in culture.

text: Cricetulus griseus

text: Cricetulus griseus

text: CHO-K1 8mM Gln 6months

characteristic: title


CHO-K1 no Gln

characteristic: External Id

text: TUG

text: public

text: CHO-K1 no Gln

text: Chinese hamster

text: CHO-K1 8mM Gln was adapted to grow without glutamine, which normally is the main energy source. Despite the fact that these cells now only have glucose and small amounts of other amino acids as energy substrates, they grow to the same density at comparable speed, but produce less waste products. Apparently their metabolism is more efficient and they run through less empty metabolic cycles.

text: Cricetulus griseus

text: Cricetulus griseus

text: CHO-K1 no Gln


CHO-K1/1D9 MCB

text: TUG

characteristic: INSDC first public

text: public

text: CHO-K1/1D9 MCB

text: Chinese hamster

text: This clone is a derivative of CHO-K1 8mM Gln MCB. It was sorted during transient protein expression for highest productivity (3fold compared to parent). High qP here is independent of genomic integration, gene copy number or similar and solely dependend on the cellular machinery involved in protein translation, assembly and processing.

text: Cricetulus griseus

text: Cricetulus griseus

text: CHO-K1/1D9 MCB


CHO-K1/1D9 3months

text: TUG

characteristic: INSDC last update

text: public

text: CHO-K1/1D9 3months

text: Chinese hamster

text: Clone CHO-K1 1D9 after 3 months in culture, where due to lack of selective pressure, the specific productivity after transient transfection is decreased to parental level

text: Cricetulus griseus

text: Cricetulus griseus

text: CHO-K1/1D9 3months


text: TGAC

text: public

characteristic: Submitter Id

text: Red clover (Trifolium pratense L.) cultivar Milvus genome assembly

text: Trifolium pratense

text: Trifolium pratense

text: Trifolium pratense var. Milvus


Staphylococcus aureus Sa_BPH1120

text: UNIMELB

text: public

text: Staphylococcus aureus Sa_BPH1120

text: BRAEMBL

characteristic: broker name

characteristic: collection date

text: Australia

characteristic: country

text: Whole genome sequencing of Staphylococcus aureus Sa_BPH1120

text: Australia

text: Human

characteristic: host

text: Diseased

characteristic: host status

text: prokaryote

characteristic: investigation type

text: Human Clinical

characteristic: isolation source

text: Staphylococcus aureus

characteristic: organism

text: Staphylococcus aureus

text: ILLUMINA

characteristic: sequencing method

text: Staphylococcus aureus Sa_BPH1120 whole genome


Staphylococcus aureus Sa_JKD6210

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIMELB

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Staphylococcus aureus Sa_JKD6210

text: BRAEMBL

text: Australia

text: Whole genome sequencing of Staphylococcus aureus Sa_JKD6210

characteristic: description

text: Australia

text: Human

text: Diseased

text: prokaryote

text: Human Clinical

text: Staphylococcus aureus

text: Staphylococcus aureus

characteristic: strain

text: Staphylococcus aureus Sa_JKD6210 whole genome


Staphylococcus aureus Sa_BPH1106

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIMELB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Staphylococcus aureus Sa_BPH1106

text: BRAEMBL

text: Australia

text: Whole genome sequencing of Staphylococcus aureus Sa_BPH1106

text: Australia

text: Human

text: Diseased

text: prokaryote

text: Human Clinical

text: Staphylococcus aureus

text: Staphylococcus aureus

text: ILLUMINA

text: Staphylococcus aureus Sa_BPH1106 whole genome

characteristic: title


Staphylococcus aureus Sa_BPH1113

text: UNIMELB

text: public

text: Staphylococcus aureus Sa_BPH1113

characteristic: Submitter Id

text: BRAEMBL

characteristic: broker name

characteristic: collection date

text: Australia

characteristic: country

text: Whole genome sequencing of Staphylococcus aureus Sa_BPH1113

text: Australia

text: Human

characteristic: host

text: Diseased

characteristic: host status

text: prokaryote

text: Human Clinical

text: Staphylococcus aureus

text: Staphylococcus aureus

text: ILLUMINA

text: Staphylococcus aureus Sa_BPH1113 whole genome


Staphylococcus aureus Sa_BPH1122

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIMELB

text: public

text: Staphylococcus aureus Sa_BPH1122

text: BRAEMBL

text: Australia

text: Whole genome sequencing of Staphylococcus aureus Sa_BPH1122

text: Australia

text: Human

text: Diseased

text: prokaryote

characteristic: investigation type

text: Human Clinical

characteristic: isolation source

text: Staphylococcus aureus

characteristic: organism

text: Staphylococcus aureus

text: ILLUMINA

characteristic: sequencing method

text: Staphylococcus aureus Sa_BPH1122 whole genome


Staphylococcus aureus Sa_JKD6229

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIMELB

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Staphylococcus aureus Sa_JKD6229

text: BRAEMBL

text: Australia

text: Whole genome sequencing of Staphylococcus aureus Sa_JKD6229

characteristic: description

text: Australia

text: Human

text: Diseased

text: prokaryote

text: Human Clinical

text: Staphylococcus aureus

text: Staphylococcus aureus

characteristic: strain

text: Staphylococcus aureus Sa_JKD6229 whole genome


Staphylococcus aureus Sa_BPH1116

text: UNIMELB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Staphylococcus aureus Sa_BPH1116

characteristic: Submitter Id

text: BRAEMBL

characteristic: broker name

text: Australia

text: Whole genome sequencing of Staphylococcus aureus Sa_BPH1116

text: Australia

text: Human

text: Diseased

text: prokaryote

text: Human Clinical

text: Staphylococcus aureus

text: Staphylococcus aureus

text: ILLUMINA

text: Staphylococcus aureus Sa_BPH1116 whole genome

characteristic: title


Staphylococcus aureus Sa_BPH1136

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIMELB

text: public

text: Staphylococcus aureus Sa_BPH1136

text: BRAEMBL

characteristic: collection date

text: Australia

characteristic: country

text: Whole genome sequencing of Staphylococcus aureus Sa_BPH1136

text: Australia

text: Human

characteristic: host

text: Diseased

characteristic: host status

text: prokaryote

text: Human Clinical

text: Staphylococcus aureus

text: Staphylococcus aureus

text: ILLUMINA

text: Staphylococcus aureus Sa_BPH1136 whole genome


Staphylococcus aureus Sa_BPH1146

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIMELB

text: public

text: Staphylococcus aureus Sa_BPH1146

text: BRAEMBL

text: Australia

text: Whole genome sequencing of Staphylococcus aureus Sa_BPH1146

text: Australia

text: Human

text: Diseased

text: prokaryote

characteristic: investigation type

text: Human Clinical

characteristic: isolation source

text: Staphylococcus aureus

characteristic: organism

text: Staphylococcus aureus

text: ILLUMINA

characteristic: sequencing method

text: Staphylococcus aureus Sa_BPH1146 whole genome


Staphylococcus aureus Sa_BPH1143

text: UNIMELB

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Staphylococcus aureus Sa_BPH1143

text: BRAEMBL

text: Australia

text: Whole genome sequencing of Staphylococcus aureus Sa_BPH1143

characteristic: description

text: Australia

text: Human

text: Diseased

text: prokaryote

text: Human Clinical

text: Staphylococcus aureus

text: Staphylococcus aureus

text: ILLUMINA

characteristic: strain

text: Staphylococcus aureus Sa_BPH1143 whole genome


Staphylococcus aureus Sa_BPH1141

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIMELB

characteristic: INSDC last update

text: public

text: Staphylococcus aureus Sa_BPH1141

characteristic: Submitter Id

text: BRAEMBL

characteristic: broker name

text: Australia

text: Whole genome sequencing of Staphylococcus aureus Sa_BPH1141

text: Australia

text: Human

text: Diseased

text: prokaryote

text: Human Clinical

text: Staphylococcus aureus

text: Staphylococcus aureus

text: ILLUMINA

text: Staphylococcus aureus Sa_BPH1141 whole genome

characteristic: title


Staphylococcus aureus Sa_BPH1118

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIMELB

text: public

text: Staphylococcus aureus Sa_BPH1118

text: BRAEMBL

characteristic: collection date

text: Australia

characteristic: country

text: Whole genome sequencing of Staphylococcus aureus Sa_BPH1118

text: Australia

text: Human

characteristic: host

text: Diseased

characteristic: host status

text: prokaryote

text: Human Clinical

text: Staphylococcus aureus

text: Staphylococcus aureus

text: ILLUMINA

text: Staphylococcus aureus Sa_BPH1118 whole genome


Staphylococcus aureus Sa_BPH1123

text: UNIMELB

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Staphylococcus aureus Sa_BPH1123

text: BRAEMBL

text: Australia

text: Whole genome sequencing of Staphylococcus aureus Sa_BPH1123

text: Australia

text: Human

text: Diseased

text: prokaryote

characteristic: investigation type

text: Human Clinical

characteristic: isolation source

text: Staphylococcus aureus

characteristic: organism

text: Staphylococcus aureus

text: ILLUMINA

characteristic: sequencing method

text: Staphylococcus aureus Sa_BPH1123 whole genome


Staphylococcus aureus Sa_BPH1142

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIMELB

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Staphylococcus aureus Sa_BPH1142

text: BRAEMBL

text: Australia

text: Whole genome sequencing of Staphylococcus aureus Sa_BPH1142

characteristic: description

text: Australia

text: Human

text: Diseased

text: prokaryote

text: Human Clinical

text: Staphylococcus aureus

text: Staphylococcus aureus

text: ILLUMINA

characteristic: strain

text: Staphylococcus aureus Sa_BPH1142 whole genome


Staphylococcus aureus Sa_BPH1117

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIMELB

characteristic: INSDC last update

text: public

text: Staphylococcus aureus Sa_BPH1117

characteristic: Submitter Id

text: BRAEMBL

characteristic: broker name

text: Australia

text: Whole genome sequencing of Staphylococcus aureus Sa_BPH1117

text: Australia

text: Human

text: Diseased

text: prokaryote

text: Human Clinical

text: Staphylococcus aureus

text: Staphylococcus aureus

text: ILLUMINA

text: Staphylococcus aureus Sa_BPH1117 whole genome

characteristic: title


Staphylococcus aureus Sa_BPH1115

text: UNIMELB

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Staphylococcus aureus Sa_BPH1115

text: BRAEMBL

characteristic: collection date

text: Australia

characteristic: country

text: Whole genome sequencing of Staphylococcus aureus Sa_BPH1115

text: Australia

text: Human

characteristic: host

text: Diseased

characteristic: host status

text: prokaryote

text: Human Clinical

text: Staphylococcus aureus

text: Staphylococcus aureus

text: ILLUMINA

text: Staphylococcus aureus Sa_BPH1115 whole genome


Staphylococcus aureus Sa_BPH1105

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIMELB

text: public

text: Staphylococcus aureus Sa_BPH1105

text: BRAEMBL

text: Australia

text: Whole genome sequencing of Staphylococcus aureus Sa_BPH1105

text: Australia

text: Human

text: Diseased

text: prokaryote

characteristic: investigation type

text: Human Clinical

characteristic: isolation source

text: Staphylococcus aureus

characteristic: organism

text: Staphylococcus aureus

text: ILLUMINA

characteristic: sequencing method

text: Staphylococcus aureus Sa_BPH1105 whole genome


Staphylococcus aureus Sa_BPH1116G20

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIMELB

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Staphylococcus aureus Sa_BPH1116G20

text: BRAEMBL

text: Australia

text: Whole genome sequencing of Staphylococcus aureus Sa_BPH1116G20

characteristic: description

text: Australia

text: Human

text: Diseased

text: prokaryote

text: Human Clinical

text: Staphylococcus aureus

text: Staphylococcus aureus

text: ILLUMINA

characteristic: strain

text: Staphylococcus aureus Sa_BPH1116G20 whole genome


text: TGAC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Red clover (Trifolium pratense) cultivar Milvus

text: Trifolium pratense

text: Trifolium pratense

text: Trifolium pratense

characteristic: title


Staphylococcus aureus AH1

characteristic: ENA-CHECKLIST

text: public

text: Staphylococcus aureus AH1

tag: Namespace:UNIVERSITY OF SCIENCE AND TECHNOLOGY OF CHINA

text: Staphylococcus aureus

text: Staphylococcus aureus

text: Staphylococcus aureus AH1


Staphylococcus aureus AH2

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF SCIENCE AND TECHNOLOGY OF CHINA

text: public

text: Staphylococcus aureus AH2

text: Staphylococcus aureus

text: Staphylococcus aureus

text: Staphylococcus aureus AH2


Staphylococcus aureus AH3

text: public

text: Staphylococcus aureus AH3

text: Staphylococcus aureus

text: Staphylococcus aureus

text: Staphylococcus aureus AH3


Staphylococcus aureus SH1

text: public

text: Staphylococcus aureus SH1

text: Staphylococcus aureus

text: Staphylococcus aureus

text: Staphylococcus aureus SH1


Staphylococcus aureus SH2

text: public

text: Staphylococcus aureus SH2

text: Staphylococcus aureus

text: Staphylococcus aureus

text: Staphylococcus aureus SH2


text: Food safety laboratory

text: public

tag: Namespace:Food safety laboratory

text: DISTAL

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Italy

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: healthy

characteristic: host health state

text: caecum

characteristic: host scientific name

text: No

characteristic: is the sequenced pathogen host associated?

text: Salmonella enterica subsp. enterica serovar Typhimurium

text: S.typhimurium

characteristic: serovar

text: salmotyphy


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Food safety laboratory

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: DISTAL

text: No

text: Italy

text: healthy

text: caecum

text: No

text: Listeria monocytogenes

characteristic: organism

text: Listeria monocytogenes

text: S.typhimurium

text: Listeriamono


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: TGAC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Trifolium pratense (redclover) genome

characteristic: description

text: Trifolium pratense

text: Trifolium pratense

text: redclover

characteristic: title


text: JLU

text: public

text: Pseudomonas sp. CCOS191 sequencing

text: Pseudomonas sp. CCOS 191

text: Pseudomonas sp. CCOS 191

text: CCOS 191

characteristic: strain

text: Pseudomonas sp. CCOS191


text: UNIVERSITY HOHENHEIM

text: public

tag: Namespace:UNIVERSITY HOHENHEIM

text: chicken gut metagenome

text: chicken gut metagenome


text: SNU

text: public

text: Healthy

text: human gut metagenome

text: human gut metagenome

text: MZ


text: SNU

text: public

text: MetS

text: human gut metagenome

text: human gut metagenome


text: SNU

text: public

text: Healthy

text: human gut metagenome

text: human gut metagenome


text: SNU

text: public

text: Healthy

text: human gut metagenome

text: human gut metagenome

text: DZ


text: SNU

text: public

text: human gut metagenome

text: human gut metagenome

text: DZ


text: SNU

text: public

text: human gut metagenome

text: human gut metagenome

text: MZ


text: SNU

text: public

text: human gut metagenome

text: human gut metagenome


text: SNU

text: public

text: MetS

text: human gut metagenome

text: human gut metagenome

text: DZ


text: SNU

text: public

text: MetS

text: human gut metagenome

text: human gut metagenome

text: MZ


text: Candiolo Cancer Institute

text: public

tag: Namespace:Candiolo Cancer Institute

text: human

characteristic: common name

text: Candiolo Cancer Institute -- Liquid Biopsy study

text: Homo sapiens

text: Homo sapiens


Streptococcus pneumoniae A66

text: University of Hull

text: public

text: Streptococcus pneumoniae A66

tag: Namespace:University of Hull

characteristic: culture collection

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Genome sequencing of Streptococcus pneumoniae A66


text: URMITE

text: public

text: Mimivirus marais

text: Mimivirus marais

text: PUMIVIRE


text: INRA-CMSE

text: public

characteristic: bio material

characteristic: collection date

text: The diversity of yeasts was studied using grape must issued from ripe Chardonnay grapes harvested from three plots (C, E and O) located in a French Burgundy vineyard, planted in 1987.

text: France

characteristic: geographic location (country and/or sea)

text: 46.30 / 4.73

characteristic: lat lon

text: CACTGATGTC

characteristic: multiplex identifiers

text: metagenome

text: FR1: 5-ANCCATTCAATCGGTANT-3; FF390: 5-CGATAACGAACGAGACCT-3

characteristic: pcr primers

text: metagenome

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UFPR

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ArrayExpress

characteristic: broker name

text: Protocols: Herbaspirillum rubrisubalbicans M1 was grown at 30ºC and 120 rpm in NFbHPN medium (Klassen et al., 1997). Seeds of susceptible cultivar Sorghum bicolor cv. A07 were surface-sterilized, germinated on water-agar (0.8%) plates and transferred to a hydroponic system composed of 30 mL of plant medium (Egener et al., 1999 without carbon and nitrogen sources) and 10 g of polypropylene spheres in 100 mL glass tubes (Balsanelli et al., 2013). Each seedling was then inoculated with 108 CFU of H. rubrisubalbicans. In the control condition without a plant, the hydroponic medium was supplemented with 2 mM of malate. Bacterial samples were taken 3 days after inoculation in duplicate. Free-living bacteria of the samples without plants (named “control”) were isolated from 250 mL of hydroponic medium by centrifugation (10,000 g, 8 min, 4°C) and re-suspended in cold lysis buffer (Tris 50 mM pH 8.0, EDTA 10 mM, SDS 0.6%). Epiphytic bacteria were removed from roots by vortexing 10 g of roots in RNAlater (Sigma) during 5 min, isolated by centrifugation (10,000 g, 8 min, 4°C) and re-suspended in cold lysis buffer. For both samples (each in duplicate), total RNA was purified using TRI® Reagent (Sigma) followed by chloroform extraction as suggested by the manufactor. Samples were treated with turbo DNase (Ambion) and the RNA quantified with a NanoDrop spectrophotometer (THERMO Scientific) and Bioanalyzer 2100 (Agilent). The ribosomal RNA was partially depleted from 2 μg of total RNA using the Ribo Zero Bacteria kit (Epicentre). The indexed cDNA libraries were constructed from 0.2 μg ribosomal-depleted RNA samples using the TruSeq Stranded RNA Sample Preparation kit v3 (Illumina).

text: Sorghum root epiphytic cells

characteristic: growth condition

text: Herbaspirillum rubrisubalbicans M1

characteristic: organism

text: Herbaspirillum rubrisubalbicans M1

text: Herbaspirillum rubrisubalbicans M1

text: Epiphytic


characteristic: ENA-FIRST-PUBLIC

text: UFPR

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: ArrayExpress

characteristic: description

text: Free-living cells

text: Herbaspirillum rubrisubalbicans M1

text: Herbaspirillum rubrisubalbicans M1

text: Herbaspirillum rubrisubalbicans M1

text: Control

characteristic: title


text: UFPR

text: public

text: ArrayExpress

text: Sorghum root epiphytic cells

text: Herbaspirillum rubrisubalbicans M1

text: Herbaspirillum rubrisubalbicans M1

text: Herbaspirillum rubrisubalbicans M1


text: UFPR

text: public

text: ArrayExpress

text: Free-living cells

text: Herbaspirillum rubrisubalbicans M1

text: Herbaspirillum rubrisubalbicans M1

text: Herbaspirillum rubrisubalbicans M1


text: UNIBE-IG

text: public

text: horse

characteristic: common name

text: Equus caballus

text: Equus caballus

text: A non-synonymous HMGA2 variant decreases height in Shetland ponies and other small horses


text: UNIVERSITY MEDICAL CENTER UTRECHT

text: public

tag: Namespace:UNIVERSITY MEDICAL CENTER UTRECHT

text: Dec 12, 2012

characteristic: collection date

text: Denmark, Kopenhagen

characteristic: geographic location (country and/or sea)

text: clinical/host-associated

characteristic: isolation source

text: Enterococcus faecium

text: Enterococcus faecium


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Medical Research Council Harwell

text: public

tag: Namespace:Medical Research Council Harwell

text: house mouse

text: Mus musculus

text: Mus musculus

text: Short Circuit mouse model


text: UNIVERSITY MEDICAL CENTER UTRECHT

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Jun 5, 2013

text: Denmark, Kopenhagen

text: clinical/host-associated

text: Enterococcus faecium

text: Enterococcus faecium


text: UNIVERSITY MEDICAL CENTER UTRECHT

text: public

text: Jun 05, 2013

text: Denmark, Kopenhagen

text: clinical/host-associated

text: Enterococcus faecium

characteristic: organism

text: Enterococcus faecium


characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY MEDICAL CENTER UTRECHT

text: public

text: Jun 17, 2013

text: Denmark, Kopenhagen

text: clinical/host-associated

text: Enterococcus faecium

text: Enterococcus faecium


text: UNIVERSITY MEDICAL CENTER UTRECHT

characteristic: INSDC first public

text: public

text: Jun 10, 2013

text: Denmark, Kopenhagen

text: clinical/host-associated

text: Enterococcus faecium

text: Enterococcus faecium


text: Swedish Museum of Natural History

characteristic: INSDC last update

text: public

tag: Namespace:Swedish Museum of Natural History

text: gray wolf

text: Shotgun sequencing of wolf (Canis lupus) rib (Taimyr 1) excavated from the Taimyr peninsula and dated to 34900 cal BP. Sequenced in multiplex with mammoth and wolf libraries. This data represents all read pairs that were successfully merged with a 11 bp overlap. All others were discarded.

text: Canis lupus

text: Canis lupus

text: Taimyr1 UDG minus


text: Swedish Museum of Natural History

text: public

characteristic: Submitter Id

text: gray wolf

text: Shotgun sequencing of wolf (Canis lupus) rib (Taimyr 1) excavated from the Taimyr peninsula and dated to 34900 cal BP. Six different amplifications of the same library were sequenced in multiplex, but without libraries from any other individual. This data represents all read pairs that were successfully merged using SeqPrep.

text: Canis lupus

text: Canis lupus

text: Taimyr1 UDG plus


text: public

tag: Namespace:UNIVERSITY OF NATURAL RESOURCES AND LIFE SCIENCES,

text: Chinese hamster

text: Histone Modifications CHO K1 8mM Glutamine batch culture

characteristic: description

text: Cricetulus griseus

text: Cricetulus griseus

text: Histone Modifications CHO-K1_8mM_Gln


text: UNIVERSITY OF NATURAL RESOURCES AND LIFE SCIENCES,

text: public

text: Chinese hamster

text: Cricetulus griseus

text: Cricetulus griseus

text: Histone Modifications CHO-K1_8mM_Gln

characteristic: title


text: UNIVERSITY MEDICAL CENTER UTRECHT

text: public

text: Mar 06, 2013

text: Denmark, Kopenhagen

text: clinical/host-associated

text: Enterococcus faecium

text: Enterococcus faecium


text: INRA Toulouse

text: public

tag: Namespace:INRA Toulouse

text: USA

text: Magnaporthe oryzae

text: Magnaporthe oryzae

characteristic: strain


text: FZB

text: public

text: M. tuberculosis TUR

characteristic: lineage

text: Mycobacterium tuberculosis complex bacterium

text: WGS of MTBC isolates


text: CANCER RESEARCH UK CAMBRIDGE INSTITUTE

text: public

tag: Namespace:CANCER RESEARCH UK CAMBRIDGE INSTITUTE

characteristic: anonymized name

text: human

characteristic: common name

text: Plasma

text: Homo sapiens

text: Homo sapiens


characteristic: ENA-CHECKLIST

text: CANCER RESEARCH UK CAMBRIDGE INSTITUTE

text: public

text: human

text: Tumour

text: Homo sapiens

text: Homo sapiens


characteristic: ENA-LAST-UPDATE

text: CANCER RESEARCH UK CAMBRIDGE INSTITUTE

text: public

text: human

text: Homo sapiens

text: Homo sapiens


characteristic: External Id

text: UNIVERSITY MEDICAL CENTER UTRECHT

text: public

text: Dec 26, 2012

characteristic: collection date

text: Denmark, Kopenhagen

characteristic: geographic location (country and/or sea)

text: clinical/host-associated

characteristic: isolation source

text: Enterococcus faecium

text: Enterococcus faecium


text: UNIVERSITY MEDICAL CENTER UTRECHT

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Feb 13, 2013

text: Denmark, Kopenhagen

text: clinical/host-associated

text: Enterococcus faecium

characteristic: organism

text: Enterococcus faecium


characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY MEDICAL CENTER UTRECHT

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Apr 22, 2013

text: Denmark, Kopenhagen

text: clinical/host-associated

text: Enterococcus faecium

text: Enterococcus faecium


text: UNIVERSITY MEDICAL CENTER UTRECHT

text: public

text: Apr 26, 2013

text: Denmark, Kopenhagen

text: clinical/host-associated

text: Enterococcus faecium

text: Enterococcus faecium

characteristic: title


text: UNIVERSITY MEDICAL CENTER UTRECHT

text: public

text: May 13, 2013

text: Denmark, Kopenhagen

text: clinical/host-associated

text: Enterococcus faecium

text: Enterococcus faecium


text: UNIVERSITY MEDICAL CENTER UTRECHT

text: public

text: Jun 03, 2013

text: Denmark, Kopenhagen

text: clinical/host-associated

text: Enterococcus faecium

text: Enterococcus faecium


text: UNIVERSITY MEDICAL CENTER UTRECHT

text: public

text: Jun 10, 2013

text: Denmark, Kopenhagen

text: clinical/host-associated

text: Enterococcus faecium

text: Enterococcus faecium


text: UNIVERSITY MEDICAL CENTER UTRECHT

text: public

text: Jun 17, 2013

text: Denmark, Kopenhagen

text: clinical/host-associated

text: Enterococcus faecium

text: Enterococcus faecium