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characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: age

characteristic: age in years

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: 5/6/2010 9:00

characteristic: collection date

characteristic: description

text: RUTF diet

characteristic: diet

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:feces

text: GAZ:United States of America

text: mouse

text: human gut metagenome

characteristic: organism

text: n

text: 100, mg

characteristic: sample name

text: human gut metagenome

characteristic: sex

characteristic: taxon id

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: y

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: 5/11/2010 9:00

characteristic: depth

text: RUTF diet

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: mouse

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: human gut metagenome

characteristic: pcr primer

characteristic: perturbation

text: n

characteristic: public

text: 100, mg

characteristic: sample id

text: human gut metagenome


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: age

characteristic: age in years

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: 4/16/2010 9:00

characteristic: collection date

characteristic: description

text: Malawi diet 1

characteristic: diet

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:feces

text: GAZ:United States of America

text: mouse

text: human gut metagenome

characteristic: organism

text: n

text: 100, mg

characteristic: sample name

text: human gut metagenome

characteristic: sex

characteristic: taxon id

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: y

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: 5/28/2010 9:00

characteristic: depth

text: Malawi diet 2

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: mouse

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: human gut metagenome

characteristic: pcr primer

characteristic: perturbation

text: n

characteristic: public

text: 100, mg

characteristic: sample id

text: human gut metagenome


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: age

characteristic: age in years

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: 5/23/2010 9:00

characteristic: collection date

characteristic: description

text: Malawi diet 2

characteristic: diet

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:feces

text: GAZ:United States of America

text: mouse

text: human gut metagenome

characteristic: organism

text: n

text: 100, mg

characteristic: sample name

text: human gut metagenome

characteristic: sex

characteristic: taxon id

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: y

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: 4/21/2010 9:00

characteristic: depth

text: Malawi diet 1

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: mouse

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: human gut metagenome

characteristic: pcr primer

characteristic: perturbation

text: n

characteristic: public

text: 100, mg

characteristic: sample id

text: human gut metagenome


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: age

characteristic: age in years

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: 5/14/2010 9:00

characteristic: collection date

characteristic: description

text: RUTF diet

characteristic: diet

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:feces

text: GAZ:United States of America

text: mouse

text: human gut metagenome

characteristic: organism

text: n

text: 100, mg

characteristic: sample name

text: human gut metagenome

characteristic: sex

characteristic: taxon id

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: y

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: 4/14/2010 15:00

characteristic: depth

text: Malawi diet 1

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: mouse

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: human gut metagenome

characteristic: pcr primer

characteristic: perturbation

text: n

characteristic: public

text: 100, mg

characteristic: sample id

text: human gut metagenome


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: age

characteristic: age in years

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: 4/21/2010 9:00

characteristic: collection date

characteristic: description

text: Malawi diet 1

characteristic: diet

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:feces

text: GAZ:United States of America

text: mouse

text: human gut metagenome

characteristic: organism

text: n

text: 100, mg

characteristic: sample name

text: human gut metagenome

characteristic: sex

characteristic: taxon id

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: UOM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Mycobacterium tuberculosis C

text: Mycobacterium tuberculosis C


text: TGAC

text: public

characteristic: description

text: Lactobacillus salivarius

text: Lactobacillus salivarius


E-MTAB-1330:Cell culture 1

text: public

text: E-MTAB-1330:Cell culture 1

tag: Namespace:Aix-Marseille University ; INRA - UMR 1163, Biotechnologie des Champignons Filamenteux

text: ArrayExpress

characteristic: broker name

text: Protocols: Growth in Malt extract liquid medium, in baffled erlenmeyers, shaken at 100 rpm, at 26 degrees C in the dark. Sampling was performed after 3 days of incubation. Extraction with the TriZol method followed by LiCl precipitation of the RNA, mRNA isolation, and library preparation with the Illumina TruSeq cDNA kit

text: P. coccineus grown alone

characteristic: growth condition

text: Pycnoporus coccineus

text: Pycnoporus coccineus

characteristic: replicate

text: Pycnoporus coccineus

text: BRFM 379

characteristic: strain

text: Cell culture 1


E-MTAB-1330:Cell culture 7

text: Aix-Marseille University ; INRA - UMR 1163, Biotechnologie des Champignons Filamenteux

text: public

text: E-MTAB-1330:Cell culture 7

text: ArrayExpress

text: P. coccineus grown in presence of Botrytis cinerea

text: Pycnoporus coccineus

characteristic: organism

text: Pycnoporus coccineus

text: Pycnoporus coccineus

text: BRFM 379

text: Cell culture 7


E-MTAB-1330:Cell culture 5

text: public

text: E-MTAB-1330:Cell culture 5

text: ArrayExpress

text: P. coccineus grown in presence of Coniophora puteana

text: Pycnoporus coccineus

text: Pycnoporus coccineus

text: Pycnoporus coccineus

text: BRFM 379

text: Cell culture 5

characteristic: title


E-MTAB-1330:Cell culture 6

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-1330:Cell culture 6

text: ArrayExpress

text: Pycnoporus coccineus

text: Pycnoporus coccineus

text: Pycnoporus coccineus

text: BRFM 379

text: Cell culture 6


E-MTAB-1330:Cell culture 2

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-1330:Cell culture 2

text: ArrayExpress

text: P. coccineus grown alone

text: Pycnoporus coccineus

text: Pycnoporus coccineus

text: Pycnoporus coccineus

text: BRFM 379

text: Cell culture 2


E-MTAB-1330:Cell culture 4

text: public

text: E-MTAB-1330:Cell culture 4

text: ArrayExpress

text: Pycnoporus coccineus

text: Pycnoporus coccineus

text: Pycnoporus coccineus

text: BRFM 379

text: Cell culture 4


text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

text: NIOB

text: public

text: Norway rat

characteristic: common name

text: Rattus norvegicus

text: Rattus norvegicus

text: N

characteristic: sub strain

text: HS parental strain


BUF/N

text: SRA-Webin

characteristic: External Id

text: NIOB

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: BUF/N

text: Norway rat

text: Rattus norvegicus

text: Rattus norvegicus

text: BUF

text: N

text: HS parental strain


WN/N

text: SRA-Webin

text: NIOB

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: WN/N

text: Norway rat

text: Rattus norvegicus

text: Rattus norvegicus

text: WN

text: N

text: HS parental strain


WKY/N

text: SRA-Webin

text: NIOB

text: public

text: WKY/N

characteristic: Submitter Id

text: Norway rat

text: Rattus norvegicus

text: Rattus norvegicus

text: WKY

text: N

text: HS parental strain


BN/SsN

text: SRA-Webin

text: NIOB

text: public

text: BN/SsN

text: Norway rat

text: Rattus norvegicus

text: Rattus norvegicus

text: BN

text: SsN

text: HS parental strain


ACI/N

text: SRA-Webin

text: NIOB

text: public

text: ACI/N

text: Norway rat

text: Rattus norvegicus

text: Rattus norvegicus

text: ACI

text: N

text: HS parental strain


MR/N

text: SRA-Webin

text: NIOB

text: public

text: MR/N

text: Norway rat

text: Rattus norvegicus

text: Rattus norvegicus

text: MR

text: N

text: HS parental strain


LE/Stm

text: SRA-Webin

text: NIOB

text: public

text: LE/Stm

text: Norway rat

text: Rattus norvegicus

text: Rattus norvegicus

text: LE

text: Stm

text: HS parental strain


BN testis

text: SRA-Webin

text: NIOB

text: public

text: BN testis

text: Norway rat

text: Rattus norvegicus

text: Rattus norvegicus

text: Male

characteristic: sex

text: BN

text: Testis

characteristic: tissue type

text: BN rat tissue: testis


BN brain

text: SRA-Webin

text: NIOB

text: public

text: BN brain

text: Norway rat

text: Rattus norvegicus

text: Rattus norvegicus

text: Male

text: BN

characteristic: strain

text: Whole brain

text: BN rat tissue: brain


BN blood

text: SRA-Webin

text: NIOB

text: public

text: BN blood

text: Norway rat

text: Rattus norvegicus

characteristic: organism

text: Rattus norvegicus

text: Male

text: BN

text: Blood

text: BN rat tissue: blood


BN liver

text: SRA-Webin

text: NIOB

text: public

text: BN liver

text: Norway rat

text: Rattus norvegicus

text: Rattus norvegicus

text: Male

text: BN

text: Liver

text: BN rat tissue: liver

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: CCME-COLORADO

text: public

characteristic: age

characteristic: age in years

characteristic: age months

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: n

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: human gut metagenome

characteristic: depth

text: Healthy

characteristic: description

text: Healthy

characteristic: elevation

text: ENVO:human-associated habitat

characteristic: env biome

text: ENVO:human-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

characteristic: family

text: MZ

characteristic: genotype

text: GAZ:Malawi

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: human gut metagenome

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: human gut metagenome

characteristic: taxon id

text: Malawian twins fecal microbiome discordant for kwashiorkor

text: Chamba

characteristic: village


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

characteristic: age in years

characteristic: age months

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: human gut metagenome

characteristic: common name

characteristic: depth

text: Kwashiorkor

characteristic: description

text: Kwashiorkor

text: RUTF

characteristic: diet

characteristic: elevation

text: ENVO:human-associated habitat

text: ENVO:human-associated habitat

text: ENVO:feces

text: DZ

text: GAZ:Malawi

text: human

text: human gut metagenome

characteristic: organism

text: n

text: human gut metagenome

characteristic: sex

characteristic: title

text: Mbiza


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

characteristic: age in years

text: y

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human gut metagenome

text: Healthy

text: Healthy

text: ENVO:human-associated habitat

characteristic: env biome

text: ENVO:human-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

characteristic: family

text: MZ

characteristic: genotype

text: GAZ:Malawi

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: human gut metagenome

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: human gut metagenome

characteristic: taxon id

text: Mayaka

characteristic: village


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

characteristic: age in years

characteristic: age months

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: n

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: human gut metagenome

characteristic: common name

characteristic: depth

text: Healthy

characteristic: description

text: Healthy

characteristic: elevation

text: ENVO:human-associated habitat

text: ENVO:human-associated habitat

text: ENVO:feces

text: DZ

text: GAZ:Malawi

text: human

text: human gut metagenome

characteristic: organism

text: n

text: human gut metagenome

characteristic: sex

characteristic: title

text: Chamba