text: public

text: Salix purpurea

text: Salix purpurea

text: Leaves Control 3


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:IRBV Institut de Recherche en Biologie Vegetale

characteristic: Submitter Id

characteristic: description

text: Salix purpurea

characteristic: organism

text: Salix purpurea

text: Leaves Control 4

characteristic: title

type: has member


text: IRBV Institut de Recherche en Biologie Vegetale

text: public

text: Salix purpurea

text: Salix purpurea

text: Leaves Treatment 1


text: public

text: Salix purpurea

text: Salix purpurea

text: Leaves Treatment 2


text: public

text: Salix purpurea

text: Salix purpurea

text: Leaves Treatment 3


text: public

text: Salix purpurea

text: Salix purpurea

text: Leaves Treatment 4


text: public

text: Salix purpurea

text: Salix purpurea

text: Leaves Treatment 5


text: public

text: Salix purpurea

text: Salix purpurea

text: Buds Control 1


text: public

text: Salix purpurea

text: Salix purpurea

text: Buds Control 2


text: public

text: Salix purpurea

text: Salix purpurea

text: Buds Control 3


text: public

text: Salix purpurea

text: Salix purpurea

text: Buds Control 4


text: public

text: Salix purpurea

text: Salix purpurea

text: Buds Treatment 1


text: public

text: Salix purpurea

text: Salix purpurea

text: Buds Treatment 2


text: public

text: Salix purpurea

text: Salix purpurea

text: Buds Treatment 3


text: public

text: Salix purpurea

text: Salix purpurea

text: Buds Treatment 4


text: public

text: Salix purpurea

text: Salix purpurea

text: Stems Control 1


text: public

text: Salix purpurea

text: Salix purpurea

text: Stems Control 2


text: public

text: Salix purpurea

text: Salix purpurea

text: Stems Control 3


text: public

text: Salix purpurea

text: Salix purpurea

text: Stems Control 4


text: public

text: Salix purpurea

text: Salix purpurea

text: Stems Treatment 1


text: public

text: Salix purpurea

text: Salix purpurea

text: Stems Treatment 2


text: public

text: Salix purpurea

text: Salix purpurea

text: Stems Treatment 3


text: LIVERPOOL SCHOOL OF TROPICAL MEDICINE

text: public

tag: Namespace:LIVERPOOL SCHOOL OF TROPICAL MEDICINE

text: African malaria mosquito

characteristic: common name

text: Anopheles funestus FANG colony

text: Anopheles funestus

text: Anopheles funestus

text: Anopheles funestus FANG colony


text: Pale

characteristic: Filet color

text: CIGENE

text: public

text: Atlantic salmon

text: A.salmon: Intestine samples fixed by freeze substitution

text: smolt

characteristic: dev stage

text: BB

characteristic: genotype

text: Salmo salar

text: Salmo salar

text: A.salmon: Intestine


characteristic: ENA-CHECKLIST

text: Red

text: CIGENE

text: public

text: Atlantic salmon

text: smolt

text: FF

text: Salmo salar

text: Salmo salar

text: A.salmon: Intestine


characteristic: ENA-FIRST-PUBLIC

text: Zhang Zhang

text: public

tag: Namespace:Zhang Zhang

text: Shaohua Xu

characteristic: collected by

characteristic: collection date

text: China

characteristic: geographic location (country and/or sea)

text: Sonneratia caseolaris

text: Sonneratia caseolaris

text: leaf

characteristic: tissue type

text: The first genome of Sonneratia caseolaris.


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: OX

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: broker name

text: Neisseria meningitidis

text: Neisseria meningitidis


Dorea massiliensis

text: URMITE

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Dorea massiliensis

characteristic: Submitter Id

text: Candidatus Dorea massiliensis AP6

characteristic: organism

text: Candidatus Dorea massiliensis AP6

characteristic: strain

text: Dorea massiliensis genome

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: PASTEUR

text: public

text: Shigella dysenteriae 1

text: Shigella dysenteriae 1

text: NIPHW 371


text: KAUST

text: public

characteristic: isolate

text: Plasmodium knowlesi

text: Plasmodium knowlesi

text: Genome diversity in Plasmodium knowlesi


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_201101

characteristic: description

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_201190

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_202101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_202190

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_203101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_203190

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_204101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_204190

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_205101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_205190

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_206101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_206190

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_207101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_207190

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_208101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_208190

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_209101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_209190

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_210101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_210190

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_211101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_211190

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_212101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_212190

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_213101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_213190

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_214101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_214190

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_215101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_216101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_217101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_218101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_219101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_220101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_221101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_222101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_223101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_224101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_225101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_226101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_227101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_228101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_229101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_230101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_231101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_232101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_233101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_234101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_235101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_236101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_237101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_238101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_239101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_240101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_241101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_242101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_243101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_244101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_245101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_246101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_247101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_248101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_249101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_250101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_251101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_252101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_253101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_254101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_255101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_256101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_257101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_258101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_259101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_260101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_261101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_262101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_263101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_264101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_265101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_266101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_267101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_268101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_269101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_270101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_271101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_272101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_273101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_274101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_275101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_276101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_277101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_278101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_279101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_280101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_281101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_282101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_283101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_284101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_285101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_291101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_292101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_293101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_294101

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: SAMPLE_WTCHG_161476_161477_163074_163075_295101

text: Neisseria meningitidis

text: Neisseria meningitidis


Megavirus montadette1

text: URMITE

text: public

text: Megavirus montadette1

text: a defense system in Mimivirus confers resistance to virophage

text: Megavirus TL-2015

text: Megavirus TL-2015

text: MIMIVIRE


Native Mongolian Chakouyi Horse

text: UNIVERSITY OF FLORIDA

text: public

text: Native Mongolian Chakouyi Horse

tag: Namespace:UNIVERSITY OF FLORIDA

text: horse

characteristic: common name

text: Native Mongolian Chakouyi Horse NGS paired end fastq files.

text: Equus caballus

text: Equus caballus

text: Native Mongolian Chakouyi Horse


characteristic: ENA-LAST-UPDATE

text: UConn Health

text: public

tag: Namespace:UConn Health

text: fruit fly

text: Drosophila melanogaster

text: Drosophila melanogaster


characteristic: External Id

text: UConn Health

text: public

text: stock: 2057, Bloomington

characteristic: bio material

text: fruit fly

text: Adult

characteristic: dev stage

text: Drosophila melanogaster

text: Drosophila melanogaster

text: Mixed (Males+Females)

characteristic: sex

text: y; cn b sp

text: Head

characteristic: tissue type


Mangalarga Marchador Horse

text: UNIVERSITY OF FLORIDA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Mangalarga Marchador Horse

text: horse

text: Mangalarga Marchador Horse NGS paired end fastq files.

text: Equus caballus

text: Equus caballus

text: Mangalarga Marchador Horse


text: public

characteristic: SRA accession

tag: Namespace:THE FEDERAL RESEARCH CENTER INSTITUTE OF CYTOLOGY AND GENETICS  The Siberian Branch of the Russian Academy of Sciences

characteristic: Submitter Id

text: house mouse

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Mouse control 1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: THE FEDERAL RESEARCH CENTER INSTITUTE OF CYTOLOGY AND GENETICS The Siberian Branch of the Russian Academy of Sciences

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: Mouse control 2

characteristic: title


text: public

text: house mouse

characteristic: common name

text: Mus musculus

text: Mus musculus

text: Mouse control 3


characteristic: ENA-LAST-UPDATE

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: Mouse agressor 1


characteristic: External Id

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: Mouse agressor 2


text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: Mouse agressor 3


text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: Mouse victim 1


text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: Mouse victim 2


text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: Mouse victim 3


text: The James Hutton Institute

text: public

tag: Namespace:The James Hutton Institute

text: R. padi

characteristic: bio material

text: Peter Thorpe

characteristic: collected by

characteristic: collection date

text: bird cherry-oat aphid

text: R. padi dissected heads ~200 per biological replica

characteristic: description

text: UK

characteristic: geographic location (country and/or sea)

text: barley (Hordeum vulgare cv. Optic).

characteristic: host

text: Rhopalosiphum padi

text: Rhopalosiphum padi

text: clonal female

text: Head


text: The James Hutton Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: R. padi

text: Peter Thorpe

text: bird cherry-oat aphid

text: R. padi bodies, without nymphs. ~ 50 per biological replica

text: UK

text: barley (Hordeum vulgare cv. Optic).

text: Rhopalosiphum padi

text: Rhopalosiphum padi

text: clonal female

characteristic: sex

text: bodies (without nymphs)

characteristic: tissue type


characteristic: ENA-CHECKLIST

text: The James Hutton Institute

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: M. cerasi

text: Peter Thorpe

text: black cherry aphid

text: M. cerasi dissected heads ~100 per biological replica

text: UK

text: American Land Cress (Barbarea verna)

text: Myzus cerasi

characteristic: organism

text: Myzus cerasi

text: clonal female

text: heads


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The James Hutton Institute

text: public

text: M. cerasi

text: Peter Thorpe

text: black cherry aphid

characteristic: common name

text: M. cerasi dissected bodies without nymphs ~50 per biological replica

text: UK

text: American Land Cress (Barbarea verna)

text: Myzus cerasi

text: Myzus cerasi

text: clonal female

text: bodies

characteristic: title


text: The James Hutton Institute

text: public

text: M. persicae

characteristic: bio material

text: Peter Thorpe

characteristic: collected by

characteristic: collection date

text: green peach aphid

text: M. persicae genotype O: dissected heads ~100 per biological replica

characteristic: description

text: Genotype O

characteristic: ecotype

text: UK

characteristic: geographic location (country and/or sea)

text: potato (Solanum tuberosum cv. Desiree)

text: Myzus persicae

text: Myzus persicae

text: clonal female

text: heads


text: The James Hutton Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: M. persicae

text: Peter Thorpe

text: green peach aphid

text: M. persicae genotype O: dissected bodies (without nymphs)~50 per biological replica

text: Genotype O

text: UK

text: potato (Solanum tuberosum cv. Desiree)

characteristic: host

text: Myzus persicae

text: Myzus persicae

text: clonal female

characteristic: sex

text: bodies

characteristic: tissue type


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: The James Hutton Institute

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: M. persicae

text: Peter Thorpe

text: green peach aphid

text: M. persicae genotype J: dissected heads ~100 per biological replica

text: Genotype J

text: UK

text: potato (Solanum tuberosum cv. Desiree)

text: Myzus persicae

characteristic: organism

text: Myzus persicae

text: clonal female

text: heads


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The James Hutton Institute

text: public

text: M. persicae

characteristic: bio material

text: Peter Thorpe

characteristic: collected by

text: green peach aphid

characteristic: common name

text: M. persicae genotype J: dissected bodies(without nyphs)~50 per biological replica

text: Genotype J

text: UK

text: potato (Solanum tuberosum cv. Desiree)

text: Myzus persicae

text: Myzus persicae

text: clonal female

text: bodies

characteristic: title


text: The James Hutton Institute

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: M. persicae

text: Peter Thorpe

characteristic: collection date

text: green peach aphid

text: M. persicae genotype F: dissected heads ~100 per biological replica

characteristic: description

text: Genotype F

characteristic: ecotype

text: UK

characteristic: geographic location (country and/or sea)

text: potato (Solanum tuberosum cv. Desiree)

text: Myzus persicae

text: Myzus persicae

text: clonal female

text: heads


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: The James Hutton Institute

characteristic: INSDC last update

text: public

text: M. persicae

text: Peter Thorpe

text: green peach aphid

text: M. persicae genotype F: dissected bodies without nymphs ~100 per biological replica

text: Genotype F

text: UK

text: potato (Solanum tuberosum cv. Desiree)

characteristic: host

text: Myzus persicae

text: Myzus persicae

text: clonal female

characteristic: sex

text: bodies

characteristic: tissue type


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CANTAB

text: public

characteristic: INSDC status

text: MMR

characteristic: SRA accession

characteristic: Submitter Id

text: Mycobacterium

characteristic: genus

text: Myanmar

text: Homo sapiens

characteristic: isolate

text: Mycobacterium tuberculosis

characteristic: organism

text: Mycobacterium tuberculosis

text: MDR TB strain

type: AMR curated data - CABBAGE

value: rifampin

value: resistant

value: Mycobacterium tuberculosis

value: streptomycin

value: ethambutol

value: isoniazid


text: CANTAB

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: MMR

characteristic: collection date

text: Mycobacterium

text: Myanmar

text: Homo sapiens

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: MDR TB strain

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: CANTAB

text: public

text: MMR

text: Mycobacterium

text: Myanmar

characteristic: geographic location (country and/or sea)

text: Homo sapiens

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: MDR TB strain

value: susceptible


text: CANTAB

characteristic: INSDC last update

text: public

text: MMR

text: Mycobacterium

text: Myanmar

text: Homo sapiens

characteristic: host

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: MDR TB strain


characteristic: ENA-LAST-UPDATE

text: CANTAB

text: public

text: MMR

text: Mycobacterium

text: Myanmar

text: Homo sapiens

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: MDR TB strain


characteristic: External Id

text: CANTAB

text: public

text: MMR

text: Mycobacterium

text: Myanmar

text: Homo sapiens

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: MDR TB strain


text: CANTAB

text: public

characteristic: INSDC status

text: MMR

text: Mycobacterium

text: Myanmar

text: Homo sapiens

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: MDR TB strain


text: CANTAB

text: public

text: MMR

characteristic: SRA accession

text: Mycobacterium

text: Myanmar

text: Homo sapiens

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: MDR TB strain


text: CANTAB

text: public

text: MMR

characteristic: Submitter Id

text: Mycobacterium

text: Myanmar

text: Homo sapiens

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: MDR TB strain


text: CANTAB

text: public

text: MMR

text: Mycobacterium

characteristic: genus

text: Myanmar

text: Homo sapiens

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: MDR TB strain


text: CANTAB

text: public

text: MMR

text: Mycobacterium

text: Myanmar

text: Homo sapiens

characteristic: isolate

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: MDR TB strain


text: CANTAB

text: public

text: MMR

text: Mycobacterium

text: Myanmar

text: Homo sapiens

text: Mycobacterium tuberculosis

characteristic: organism

text: Mycobacterium tuberculosis

text: MDR TB strain


text: CANTAB

characteristic: INSDC center name

text: public

text: MMR

text: Mycobacterium

text: Myanmar

text: Homo sapiens

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: MDR TB strain


text: STELLENBOSCH UNIVERSITY

characteristic: INSDC first public

text: public

tag: Namespace:STELLENBOSCH UNIVERSITY

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Whole genome sequencing reveals heterogeneity and antibiotic purification in Mycobacterium tuberculosis isolates


text: ED

text: public

text: Aberdeen Angus High Concentration Diet Low Emitter

characteristic: description

text: metagenome

text: metagenome

text: AA.Conc.Low


text: ED

text: public

text: Aberdeen Angus High Concentration Diet High Emitter

text: metagenome

text: metagenome

text: AA.Conc.High

characteristic: title


characteristic: ENA-CHECKLIST

text: ED

text: public

text: Limousin High Concentration Diet Low Emitter

text: metagenome

text: metagenome

text: L.Conc.Low


characteristic: ENA-FIRST-PUBLIC

text: ED

text: public

text: Limousin High Concentration Diet High Emitter

text: metagenome

text: metagenome

text: L.Conc.High


text: ED

text: public

text: Aberdeen Angus Medium Concentration Diet Low Emitter

text: metagenome

text: metagenome

text: AA.Med.Low


text: ED

text: public

text: Aberdeen Angus Medium Concentration Diet High Emitter

text: metagenome

text: metagenome

text: AA.Med.High


text: ED

text: public

text: Limousin Medium Concentration Diet Low Emitter

text: metagenome

text: metagenome

text: L.Med.Low


text: ED

text: public

text: Limousin Medium Concentration Diet High Emitter

text: metagenome

text: metagenome

text: L.Med.High


text: INSTITUTE OF FOOD RESEARCH

text: public

tag: Namespace:INSTITUTE OF FOOD RESEARCH

text: SO4698-09 whole genome

text: Salmonella enterica subsp. enterica serovar Typhimurium


text: STELLENBOSCH UNIVERSITY

text: public

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Whole genome sequences of rifampicin mono resistant colonies


text: public

tag: Namespace:Whitney Laboratory for Marine Bioscience

text: Ophionereis fasciata

text: Ophionereis fasciata

text: Ofas genome


text: Whitney Laboratory for Marine Bioscience

text: public

text: Ophionereis fasciata

text: Ophionereis fasciata

text: Ofas genome


text: University of Dundee

text: public

tag: Namespace:University of Dundee

text: ArrayExpress

characteristic: broker name

text: Protocols: Cells grown HL5 axenic medium at 22C polyA RNA enrichment via polyT magnetic beads Illumina TruSeqRNA v2

text: 22 hours slug

characteristic: developmental stage

text: DcgA knockout

characteristic: genotype

text: HL5 axenic medium

characteristic: growth condition

text: Dictyostelium discoideum

text: Dictyostelium discoideum

text: Dictyostelium discoideum

characteristic: strain


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Dundee

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: 22 hours mid culminant

text: random integrant of construct

text: HL5 axenic medium

text: Dictyostelium discoideum

text: Dictyostelium discoideum

text: Dictyostelium discoideum


LB 2

text: JAMES COOK UNIVERSIT

text: public

characteristic: SRA accession

text: LB 2

tag: Namespace:JAMES COOK UNIVERSIT

characteristic: Submitter Id

text: soil metagenome

text: soil metagenome

text: LB 10% CH4 B


LB 3

text: JAMES COOK UNIVERSIT

characteristic: INSDC center name

text: public

text: LB 3

text: soil metagenome

characteristic: organism

text: soil metagenome

text: LB 20% CH4 A


LB 4

text: JAMES COOK UNIVERSIT

characteristic: INSDC first public

text: public

text: LB 4

text: soil metagenome

text: soil metagenome

text: LB 20% CH4 B


LB 5

text: JAMES COOK UNIVERSIT

text: public

text: LB 5

text: soil metagenome

text: soil metagenome

text: LB 30% CH4 A

characteristic: title


LB 6

characteristic: ENA-CHECKLIST

text: JAMES COOK UNIVERSIT

text: public

text: LB 6

text: soil metagenome

text: soil metagenome

text: LB 30% CH4 B


LB 7

characteristic: ENA-FIRST-PUBLIC

text: JAMES COOK UNIVERSIT

text: public

text: LB 7

text: soil metagenome

text: soil metagenome

text: LB 40% CH4 A


LB 8

text: JAMES COOK UNIVERSIT

text: public

text: LB 8

text: soil metagenome

text: soil metagenome

text: LB 40% CH4 B


LB 9

text: JAMES COOK UNIVERSIT

text: public

text: LB 9

text: soil metagenome

text: soil metagenome

text: LB 50% CH4 A


LB 10

text: JAMES COOK UNIVERSIT

text: public

text: LB 10

text: soil metagenome

text: soil metagenome

text: LB 50% CH4 B


LB 1

text: JAMES COOK UNIVERSIT

text: public

text: LB 1

text: soil metagenome

text: soil metagenome

text: LB 10% CH4 A


text: ERASMUS MC, UNIVERISTY MEDICAL CENTER

text: public

tag: Namespace:ERASMUS MC, UNIVERISTY MEDICAL CENTER

text: Dutch Mobile Laboratories

characteristic: collecting institution

characteristic: collection date

text: Dutch Mobile Laboratories

characteristic: collector name

text: International collaborative projects are currently underway to study EBOV evolution and epidemiology in more detail and whole genome sequences from patients tested positive for EBOV in Dutch Mobile Laboratories may aid in this global effort to understand the current EBOV epidemic and in the combat against EBOV disease. Here we present an analysis of newly determined Ebolavirus genome sequences from the Western Urban and Kono regions. Most viruses were isolated from patients infected in February and March 2015, but the data also include newly circulating strains from the end of June 2015 from the Magazine Wharf area of Freetown, Sierra Leone.

characteristic: description

text: Sierra Leone

characteristic: geographic location (country and/or sea)

text: Human

characteristic: host common name

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not collected

characteristic: host subject id

characteristic: isolate

text: blood

characteristic: isolation source host associated

text: Zaire ebolavirus

text: Zaire ebolavirus

text: not collected

characteristic: serotype (required for a seropositive sample)

text: Ebola virus sequencing Dutch Mobile Laboratories


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institute for Medical Microbiology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Institute for Medical Microbiology

characteristic: Submitter Id

text: Extracellular growing bacteria

text: Listeria monocytogenes EGD-e

characteristic: organism

text: Listeria monocytogenes EGD-e


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Institute for Medical Microbiology

text: public

text: intracellular growing bacteria

characteristic: description

text: Listeria monocytogenes EGD-e

text: Listeria monocytogenes EGD-e

characteristic: title


text: PUBLIC HEALTH ENGLAND

text: public

tag: Namespace:PUBLIC HEALTH ENGLAND

characteristic: broker name

text: Neisseria meningitidis

text: Neisseria meningitidis


text: LEIDEN UNIVERSITY MEDICAL CENTER

text: public

tag: Namespace:LEIDEN UNIVERSITY MEDICAL CENTER

text: Mus musculus

characteristic: host

text: host cecum

characteristic: isolation source

text: Helicobacter typhlonius

text: Helicobacter typhlonius

text: MIT 97-6810

characteristic: strain

text: Helicobacter typhlonius


E-MTAB-3826:Sample 1

tag: attribute

characteristic: ENA-LAST-UPDATE

text: CSHL

text: public

text: E-MTAB-3826:Sample 1

text: ArrayExpress

characteristic: cultivar

text: Protocols: Roots were collected from 14 days old seedling; Ears were collected from v8 stage, and tassels collected from v7 stage, pollen collected from r1 stage, embryo and endosperm were collected from seeds of 20 days after pollination. Tissues were immediately frozen in liquid N. For each tissue, at least 10 plants were pooled and about ~30 ears and tassels were pooled for each of 3 biological replicates. Maize B73 inbred lines were grown at CSHL Uplands Farm. Total RNA was prepared by grinding tissue in TRIzol reagent (Invitrogen 15596026) on dry ice and processed following the protocol provided by manufacturer. To remove DNA, an aliquot of total RNA was treated with RQ1 DNase (Promega M6101), followed by phenol/chloroform/iso-amyl alcohol extraction, chloroform/iso-amyl alcohol extraction using Phase Lock Gel Light tubes (5 PRIME 2302800) and ethanol precipitation. RNA precipitate was stored in -20oC freezer. Total RNA (20 μg) was used for poly(A)+ selection using oligo(dT) magnetic beads (Invitrogen 610-02), eluted in water and used for RNA-seq library construction with ScriptSeqTM kit (Epicentre SS10906) or mRNA-seq Sample Prep kit (Illumina RS-100-0801) according to the manufacturer’s protocol. Libraries were amplified with 12-15 cycles of PCR, and then sequenced in two lanes on Hiseq2000 PE100 platform in woodbury Genome Center in Cold Spring Harbor Laboratory.

text: Zea mays

text: Zea mays

text: ear

characteristic: organism part

text: Zea mays

text: Sample 1


E-MTAB-3826:Sample 2

characteristic: External Id

text: CSHL

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-3826:Sample 2

text: ArrayExpress

text: Zea mays

text: Zea mays

text: embryo

text: Zea mays

text: Sample 2


E-MTAB-3826:Sample 3

text: CSHL

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-3826:Sample 3

text: ArrayExpress

text: Zea mays

text: Zea mays

text: endosperm

text: Zea mays

text: Sample 3


E-MTAB-3826:Sample 4

characteristic: ENA-CHECKLIST

text: CSHL

text: public

text: E-MTAB-3826:Sample 4

characteristic: Submitter Id

text: ArrayExpress

text: Zea mays

characteristic: organism

text: Zea mays

text: pollen

text: Zea mays

text: Sample 4


E-MTAB-3826:Sample 5

characteristic: ENA-FIRST-PUBLIC

text: CSHL

text: public

text: E-MTAB-3826:Sample 5

text: ArrayExpress

characteristic: description

text: Zea mays

text: Zea mays

text: root

text: Zea mays

text: Sample 5

characteristic: title


E-MTAB-3826:Sample 6

text: CSHL

text: public

text: E-MTAB-3826:Sample 6

text: ArrayExpress

characteristic: broker name

text: Zea mays

text: Zea mays

text: tassel

text: Zea mays

text: Sample 6


E-MTAB-3826:Sample 7

text: CSHL

text: public

text: E-MTAB-3826:Sample 7

text: ArrayExpress

text: Zea mays

text: Zea mays

text: ear

text: Zea mays

text: Sample 7


E-MTAB-3826:Sample 8

text: CSHL

text: public

text: E-MTAB-3826:Sample 8

text: ArrayExpress

text: Zea mays

text: Zea mays

text: embryo

text: Zea mays

text: Sample 8


E-MTAB-3826:Sample 9

text: CSHL

text: public

text: E-MTAB-3826:Sample 9

text: ArrayExpress

text: Zea mays

text: Zea mays

text: endopserm

text: Zea mays

text: Sample 9


E-MTAB-3826:Sample 10

text: CSHL

text: public

text: E-MTAB-3826:Sample 10

text: ArrayExpress

text: Zea mays

text: Zea mays

text: pollen

text: Zea mays

text: Sample 10


E-MTAB-3826:Sample 11

text: CSHL

text: public

text: E-MTAB-3826:Sample 11

text: ArrayExpress

text: Zea mays

text: Zea mays

text: root

text: Zea mays

text: Sample 11


E-MTAB-3826:Sample 12

text: CSHL

text: public

text: E-MTAB-3826:Sample 12

text: ArrayExpress

text: Zea mays

text: Zea mays

text: tassel

text: Zea mays

text: Sample 12


E-MTAB-3826:Sample 13

text: CSHL

text: public

text: E-MTAB-3826:Sample 13

text: ArrayExpress

text: Zea mays

text: Zea mays

text: ear

text: Zea mays

text: Sample 13


E-MTAB-3826:Sample 14

text: CSHL

text: public

text: E-MTAB-3826:Sample 14

text: ArrayExpress

text: Zea mays

text: Zea mays

text: embryo

text: Zea mays

text: Sample 14


E-MTAB-3826:Sample 15

text: CSHL

text: public

text: E-MTAB-3826:Sample 15

text: ArrayExpress

text: Zea mays

text: Zea mays

text: endosperm

text: Zea mays

text: Sample 15


E-MTAB-3826:Sample 16

text: CSHL

text: public

text: E-MTAB-3826:Sample 16

text: ArrayExpress

text: Zea mays

text: Zea mays

text: pollen

text: Zea mays

text: Sample 16


E-MTAB-3826:Sample 17

text: CSHL

text: public

text: E-MTAB-3826:Sample 17

text: ArrayExpress

text: Zea mays

text: Zea mays

text: root

text: Zea mays

text: Sample 17


E-MTAB-3826:Sample 18

text: CSHL

text: public

text: E-MTAB-3826:Sample 18

text: ArrayExpress

text: Zea mays

text: Zea mays

text: tassel

text: Zea mays

text: Sample 18


text: University of Athens, Greece

text: public

tag: Namespace:University of Athens, Greece

text: metagenome

text: metagenome

text: Bacteria from position 1A


text: University of Athens, Greece

text: public

text: metagenome

text: metagenome

text: Bacteria from position 1B


text: University of Athens, Greece

text: public

text: metagenome

text: metagenome

text: Bacteria from position 2


text: University of Athens, Greece

text: public

text: metagenome

text: metagenome

text: Bacteria from position 3


text: University of Athens, Greece

text: public

text: metagenome

text: metagenome

text: Bacteria from position 4


text: University of Athens, Greece

text: public

text: metagenome

text: metagenome

text: Fungi from position 1A


text: University of Athens, Greece

text: public

text: metagenome

text: metagenome

text: Fungi from position 1B


text: University of Athens, Greece

text: public

text: metagenome

text: metagenome

text: Fungi from position 2


text: University of Athens, Greece

text: public

text: metagenome

text: metagenome

text: Fungi from position 3


text: University of Athens, Greece

text: public

text: metagenome

text: metagenome

text: Fungi from position 4


E-MTAB-3837:Sample 10

text: public

text: E-MTAB-3837:Sample 10

tag: Namespace:Department of Biology and Biological Engineering, Chalmers University of Technology

text: ArrayExpress

characteristic: cell line

text: Protocols: Samples for RNA analysis were rapidly taken from steady-state chemostats, frozen in liquid nitrogen and stored at −80°C. Chemostat cultures were performed with a dilution rate of 0.05 h-1 at 30 °C in 1.2 L bioreactors (DASGIP) with a working volume of 750 mL at pH 3.5, controlled with 2 M KOH. Dissolved oxygen was kept above 30% with a stirrer rate of 600 rpm and an air flow rate of 1 vvm. For carbon restriction, one liter medium contained 5 g glucose, 5 g (NH4)2SO4, 3 g KH2PO4, 0.5 g MgSO4·7 H2O, vitamins and trace metal solutions (Verduyn et al. 1992) and 125 μL antifoam 204 (Sigma-Aldrich). For nitrogen restriction a similar medium was used, where the glucose was increased to 25 g, the (NH4)2SO4 decreased to 0.5 g while SO4 levels remained constant by adding 5.96 g K2SO4. CO2 and residual O2 in the exhaust gas were measured using an online gas analyser (DASGIP). Total RNA was extracted with Trizol (Invitrogen) using the manufacturer’s instructions with additional mechanical disruption of the cells using a FastPrep homogenizer (MP Biomedicals) and 1 mm silica beads. Samples were depleted of rRNA using RiboZero

text: DGA1 overexpression

characteristic: genotype

text: carbon restriction

characteristic: growth condition

text: Yarrowia lipolytica

text: Yarrowia lipolytica

text: Yarrowia lipolytica

text: Sample 10


E-MTAB-3837:Sample 11

characteristic: ENA-LAST-UPDATE

text: Department of Biology and Biological Engineering, Chalmers University of Technology

text: public

text: E-MTAB-3837:Sample 11

text: ArrayExpress

text: DGA1 overexpression

text: carbon restriction

text: Yarrowia lipolytica

text: Yarrowia lipolytica

text: Yarrowia lipolytica

text: Sample 11


E-MTAB-3837:Sample 12

characteristic: External Id

text: public

text: E-MTAB-3837:Sample 12

text: ArrayExpress

text: DGA1 overexpression

text: carbon restriction

text: Yarrowia lipolytica

text: Yarrowia lipolytica

text: Yarrowia lipolytica

text: Sample 12


E-MTAB-3837:Sample 7

characteristic: INSDC center name

text: public

text: E-MTAB-3837:Sample 7

text: ArrayExpress

text: DGA1 overexpression

text: nitrogen restriction

text: Yarrowia lipolytica

text: Yarrowia lipolytica

text: Yarrowia lipolytica

text: Sample 7


E-MTAB-3837:Sample 8

characteristic: INSDC first public

text: public

text: E-MTAB-3837:Sample 8

text: ArrayExpress

text: DGA1 overexpression

text: nitrogen restriction

text: Yarrowia lipolytica

text: Yarrowia lipolytica

text: Yarrowia lipolytica

text: Sample 8


E-MTAB-3837:Sample 9

characteristic: INSDC last update

text: public

text: E-MTAB-3837:Sample 9

text: ArrayExpress

text: DGA1 overexpression

text: nitrogen restriction

text: Yarrowia lipolytica

text: Yarrowia lipolytica

text: Yarrowia lipolytica

text: Sample 9


Sfrugi-M-Pinto

text: MPICE

text: public

characteristic: INSDC status

text: Sfrugi-M-Pinto

text: fall armyworm

characteristic: common name

text: Spodoptera frugiperda

text: Spodoptera frugiperda

text: Spodoptera-Host


Sfrugi-M-Maize

characteristic: ENA-CHECKLIST

text: MPICE

text: public

characteristic: SRA accession

text: Sfrugi-M-Maize

text: fall armyworm

text: Spodoptera frugiperda

text: Spodoptera frugiperda

text: Spodoptera-Host


Sfrugi-R-Pinto

text: MPICE

text: public

text: Sfrugi-R-Pinto

characteristic: Submitter Id

text: fall armyworm

text: Spodoptera frugiperda

characteristic: organism

text: Spodoptera frugiperda

text: Spodoptera-Host


Sfrugi-R-Maize

characteristic: ENA-FIRST-PUBLIC

text: MPICE

text: public

text: Sfrugi-R-Maize

text: fall armyworm

text: Spodoptera frugiperda

text: Spodoptera frugiperda

text: Spodoptera-Host


text: BIHP, INSTITUT PASTEUR

text: public

tag: Namespace:BIHP, INSTITUT PASTEUR

text: malaria parasite P. falciparum

text: Illumina RNA sequencing libraries of material generated by immunoprecipitation of PfAlba1-Ty1 lysates.

characteristic: description

text: Plasmodium falciparum

text: Plasmodium falciparum

characteristic: title


Empty vector

text: BIHP, INSTITUT PASTEUR

text: public

text: Empty vector

text: malaria parasite P. falciparum

text: Illumina RNA sequencing libraries of material generated by immunoprecipitation of empty vector lysates.

text: Plasmodium falciparum

text: Plasmodium falciparum

text: Empty vector


GSTPfAlba1 Troph/Schiz

text: BIHP, INSTITUT PASTEUR

text: public

text: GSTPfAlba1 Troph/Schiz

text: malaria parasite P. falciparum

text: Illumina RNA sequencing libraries of material generated by affinity purification of PfAlba1-GST.

text: Plasmodium falciparum

text: Plasmodium falciparum

text: GSTPfAlba1 Troph/Schiz


GST Troph/Schiz

text: BIHP, INSTITUT PASTEUR

text: public

text: GST Troph/Schiz

text: malaria parasite P. falciparum

text: Illumina RNA sequencing libraries of material generated by non-specific purification by GST.

text: Plasmodium falciparum

text: Plasmodium falciparum

text: GST Troph/Schiz


PfAlba1Ty1 trophozoite

text: BIHP, INSTITUT PASTEUR

text: public

text: PfAlba1Ty1 trophozoite

text: malaria parasite P. falciparum

text: 28-30 h trophozoite stage

text: Plasmodium falciparum

text: Plasmodium falciparum

text: PfAlba1Ty1 trophozoite


3D7 trophozoite

text: BIHP, INSTITUT PASTEUR

text: public

text: 3D7 trophozoite

text: malaria parasite P. falciparum

text: 28-30 h trophozoite stage

text: Plasmodium falciparum

text: Plasmodium falciparum

text: 3D7 trophozoite


3D7 ring

text: BIHP, INSTITUT PASTEUR

text: public

text: 3D7 ring

text: malaria parasite P. falciparum

text: 8-10 h ring stage

text: Plasmodium falciparum

text: Plasmodium falciparum

text: 3D7 ring


PfAlba1Ty1 ring

text: BIHP, INSTITUT PASTEUR

text: public

text: PfAlba1Ty1 ring

text: malaria parasite P. falciparum

text: 8-10 h ring stage

text: Plasmodium falciparum

text: Plasmodium falciparum

text: PfAlba1Ty1 ring


Empty vector trophozoite

text: BIHP, INSTITUT PASTEUR

text: public

text: Empty vector trophozoite

text: malaria parasite P. falciparum

text: 28-30 h trophozoite

text: Plasmodium falciparum

text: Plasmodium falciparum

text: Empty vector trophozoite


Empty vector ring

text: BIHP, INSTITUT PASTEUR

text: public

text: Empty vector ring

text: malaria parasite P. falciparum

text: 8-10 h ring

text: Plasmodium falciparum

text: Plasmodium falciparum

text: Empty vector ring


text: URMITE

text: public

text: Bartonella henselae

text: Bartonella henselae

characteristic: strain


text: the Netherlands Institute of Ecology

text: public

tag: Namespace:the Netherlands Institute of Ecology

text: Matheus Cipriano

characteristic: collected by

text: Brazil

characteristic: geographic location (country and/or sea)

text: Bom Jesus dos Perdoes - SP

characteristic: geographic location (region and locality)

text: metagenome

text: metagenome


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institute of Tropical Medicine

text: public

tag: Namespace:Institute of Tropical Medicine

text: Drug resistant M. tuberculosis for two Ugandan Surveys

text: Uganda

text: DNA from M. tuberculosis

characteristic: isolation source

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Drug resistant M. tuberculosis


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:MRC NATIONAL INSTITUTE FOR MEDICAL RESEARCH

characteristic: [RA] ng/ml

characteristic: [Shh] ug/ml

characteristic: [dox] ug/ml

characteristic: cell line

text: house mouse

characteristic: condition

text: Mus musculus

text: Mus musculus

characteristic: time point


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: MRC NATIONAL INSTITUTE FOR MEDICAL RESEARCH

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: house mouse

characteristic: common name

text: Mus musculus

characteristic: organism

text: Mus musculus

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SLU

characteristic: INSDC center name

text: public

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Chinese Crested dog


text: CENTRE FOR GEOGENETICS

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:CENTRE FOR GEOGENETICS

text: CGG_1_011850 YT03 / 40 / ABC9779 Equus ferus Irish Gulch Central Alaska, USA

characteristic: description

text: Equus caballus ferus

text: Equus caballus ferus


text: CENTRE FOR GEOGENETICS

text: public

text: CGG_1_011849 YT03 / 185 / ABC9926 Equus ferus Irish Gulch Central Alaska, USA

text: Equus caballus ferus

text: Equus caballus ferus


text: CENTRE FOR GEOGENETICS

text: public

text: CGG_1_017438 CDM4 Hippidion saldiasi Cueva del Milodón Magallanes, Southern Chile

text: Hippidion saldiasi

text: Hippidion saldiasi


text: CENTRE FOR GEOGENETICS

text: public

text: horse

text: CGG_1_017010 715-660 Equus caballus Botay Northern Kazakhstan

text: Equus caballus

text: Equus caballus


text: CENTRE FOR GEOGENETICS

text: public

text: horse

text: CGG_1_017038 838-64 Equus caballus Botay Chelyabinsk region, Southwestern Russia

text: Equus caballus

text: Equus caballus


text: SLU

text: public

text: dog

text: SNP variation of four Chinese Crested dogs (WGS data)

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Chinese Crested dog


text: CIB

text: public

text: uncultured bacterium

text: uncultured bacterium


E-MTAB-3816:Sample 1

text: public

text: E-MTAB-3816:Sample 1

tag: Namespace:Lab Pharmaceutical Microbiology, Ghent University

text: ArrayExpress

characteristic: broker name

text: Protocols: Staphylococcus aureus Mu50 (MRSA Mu50) biofilms were formed in microtiter plates as previously described (Brackman et al, 2011). Biofilms received no treatment (samples 1A, 1B and 1C), a treatment with HAM (samples 2A, 2B and 2C) or VAN (samples 3A, 3B and 3C) alone or a combination of VAN and HAM (samples 4A, 4B and 4C). 'RNA was extracted immediately following harvesting of the cells, using the Ambion RiboPure Bacteria Kit (Ambion, Austin, TX) according to the manufacturerâs instructions and included a DNAse I treatment for 1 h at 37Â°C.Concentration and quality of the total extracted RNA was checked by using the ''Quant-it ribogreen RNA assay'' (Life Technologies, Grand Island, NY, USA) and the RNA 6000 pico chip (Agilent Technologies, Santa Clara, CA, USA), respectively' 'approximately 30 ng of rRNA depleted RNA was used to create barcoded strand specific libraries with the Truseq stranded library preparation kit (Illumina, San Diego, USA).Library preparation was performed using the '' NEBNext Ultra Directional RNA libr prep for Illumina'' (NEB, Ipswich, MA, USA) according to manufacturer''s protocol.Libraries were quantified by qPCR, according to Illumina''s protocol ''Sequencing Library qPCR Quantification protocol guide'', version February 2011. A DNA 1000 chip (Agilent Technologies, Santa Clara, CA, US) was used to control the library''s size distribution and quality. Sequencing was performed on a high throughput Illumina NextSeq 500 flow cell generating 75 bp single reads.'

text: Staphylococcus aureus subsp. aureus Mu50

text: Sample 1


E-MTAB-3816:Sample 10

text: Lab Pharmaceutical Microbiology, Ghent University

text: public

text: E-MTAB-3816:Sample 10

text: ArrayExpress

text: Sample 10


E-MTAB-3816:Sample 11

text: public

text: E-MTAB-3816:Sample 11

text: ArrayExpress

text: Sample 11


E-MTAB-3816:Sample 12

text: public

text: E-MTAB-3816:Sample 12

text: ArrayExpress

text: Sample 12


E-MTAB-3816:Sample 2

text: public

text: E-MTAB-3816:Sample 2

text: ArrayExpress

text: Sample 2


E-MTAB-3816:Sample 3

text: public

text: E-MTAB-3816:Sample 3

text: ArrayExpress

text: Sample 3


E-MTAB-3816:Sample 4

text: public

text: E-MTAB-3816:Sample 4

text: ArrayExpress

text: Sample 4


E-MTAB-3816:Sample 5

text: public

text: E-MTAB-3816:Sample 5

text: ArrayExpress

text: Sample 5


E-MTAB-3816:Sample 6

text: public

text: E-MTAB-3816:Sample 6

text: ArrayExpress

text: Sample 6


E-MTAB-3816:Sample 7

text: public

text: E-MTAB-3816:Sample 7

text: ArrayExpress

text: Sample 7


E-MTAB-3816:Sample 8

text: public

text: E-MTAB-3816:Sample 8

text: ArrayExpress

text: Sample 8


E-MTAB-3816:Sample 9

text: public

text: E-MTAB-3816:Sample 9

text: ArrayExpress

text: Sample 9


text: UMCG Groningen

text: public

tag: Namespace:UMCG Groningen

characteristic: isolate

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

text: Klebsiella KPC


text: UNIVERSITY OF LIVERPOOL

text: public

tag: Namespace:UNIVERSITY OF LIVERPOOL

text: S. hominis skin isolate

text: Staphylococcus hominis

text: Staphylococcus hominis

text: S. hominis


text: UNIVERSITY OF LIVERPOOL

text: public

text: Staphylococcus simulans type strain

text: Staphylococcus simulans

text: Staphylococcus simulans

text: Species of Staphylococcus


text: UNIVERSITY OF LIVERPOOL

text: public

text: Staphylococcus cohnii type strain

text: Staphylococcus cohnii

text: Staphylococcus cohnii

text: Species of Staphylococcus


text: UNIVERSITY OF LIVERPOOL

text: public

text: Staphylococcus haemolyticus skin isolate

text: Staphylococcus haemolyticus

text: Staphylococcus haemolyticus

text: Species of Staphylococcus


text: UNIVERSITY OF LIVERPOOL

text: public

text: Staphylococcus saprophyticus isolated from the urinary tract

text: Staphylococcus saprophyticus

text: Staphylococcus saprophyticus

text: Staphylococcus saprophyticus


text: UNIVERSITY OF LIVERPOOL

text: public

text: Staphylococcus aureus skin isolate

text: Staphylococcus aureus

text: Staphylococcus aureus

text: Staphylococcus aureus


text: CNRS

text: public

text: fruit fly

text: Ovaries were homogenized with a pestle in Trizol (Invitrogen) and were snap frozen and stored at ‐80°C until RNA extraction. RNA was precipitated by standard methods with chloroform, isopropanol, washed in EtOH 70% and resuspended in RNasefree H2O (Sigma). DNA was digested with DNase following the indicated procedure (Ambion). RNA was precipitated with phenol‐chloroform, chloroform, NaAc (0.3M, pH5.5) and isopropanol treatments. RNAs were washed with EtOH 100% and resuspended in RNase‐free H20. RNA quality was controlled by Bioanalyzer 2100 (Agilent technologies). RNA concentration was measured with a Nanodrop (Thermo Scientific) or a Qbit (Invitrogen). For small RNAs deep sequencing (Fasteris), ovaries from 50 control flies and 500 Rpp30 mutant flies were used.

text: Drosophila melanogaster

text: Drosophila melanogaster

text: female

characteristic: sex

text: ovaries

characteristic: tissue type

text: RNA from Rpp30-18.2/CyO Drosophila ovaries


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF WATERLOO

text: public

tag: Namespace:UNIVERSITY OF WATERLOO

text: Corn

characteristic: crop

text: 16S rRNA gene sequences of agricultural field

text: light

characteristic: dnaweight

text: CTD

characteristic: drainagemethod

text: Manure

characteristic: fertilizer

characteristic: fieldnumber

characteristic: incubationtime

text: soil metagenome

characteristic: reactor

text: soil metagenome

text: Winchester

characteristic: site


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF WATERLOO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Soybean

text: heavy

text: UCTD

text: Mineral

text: soil metagenome

characteristic: organism

text: soil metagenome

text: WEBs

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF WATERLOO

characteristic: INSDC last update

text: public

text: Soybean

characteristic: crop

characteristic: description

text: light

text: UCTD

text: Mineral

text: soil metagenome

text: soil metagenome

text: WEBs


text: UNIVERSITY OF WATERLOO

text: public

text: Soybean

text: heavy

characteristic: dnaweight

text: CTD

characteristic: drainagemethod

text: Mineral

characteristic: fertilizer

characteristic: fieldnumber

characteristic: incubationtime

text: soil metagenome

text: soil metagenome

text: WEBs


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF WATERLOO

characteristic: INSDC center name

text: public

text: Soybean

text: light

text: CTD

text: Mineral

text: soil metagenome

characteristic: reactor

text: soil metagenome

text: WEBs

characteristic: site


text: UNIVERSITY OF WATERLOO

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Corn

text: heavy

text: CTD

text: Manure

text: soil metagenome

characteristic: organism

text: soil metagenome

text: Winchester


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF WATERLOO

characteristic: INSDC last update

text: public

text: Purified DGGE bands

text: soil metagenome

text: soil metagenome

characteristic: title


text: UNIVERSITY OF WATERLOO

text: public

text: Soybean

characteristic: crop

text: Shotgun metagenome of agricultural soil, light DNA

characteristic: description

text: light

characteristic: dnaweight

text: Mineral

characteristic: fertilizer

text: soil metagenome

text: soil metagenome

text: WEBs


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF WATERLOO

text: public

text: Soybean

text: Shotgun metagenome of agricultural soil, heavy DNA (denitrifier enriched)

text: heavy

text: Mineral

text: soil metagenome

text: soil metagenome

text: WEBs


text: UNIVERSITY OF WATERLOO

characteristic: INSDC center name

text: public

text: Corn

text: light

text: Manure

text: soil metagenome

text: soil metagenome

text: Winchester


text: UNIVERSITY OF WATERLOO

text: public

text: Corn

text: heavy

text: Manure

text: soil metagenome

text: soil metagenome

text: Winchester

characteristic: site


characteristic: INSDC first public

text: public

tag: Namespace:IZN - Martin-Luther-University Halle/Wittenberg

text: ArrayExpress

characteristic: broker name

characteristic: cultivar

text: Protocols: infected leaf spots were collected 0, 24, 48 and 120 hours post infection and total RNA was purfied 3rd leaf of Zea mays variety B73 or Golden Jubilee was infected with 10^6 spores per ml as drop infections total RNA extract of infected leaf spots Illumina mRNA-Seq Sample Prep Kit was used to process the samples, according to Illumina protocol 1004898 Rv. D

text: pre-penetration

characteristic: disease staging

text: Colletotrichum graminicola

characteristic: infect

text: Zea mays

text: Zea mays

text: Zea mays

unit: hour

characteristic: time


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: IZN - Martin-Luther-University Halle/Wittenberg

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: pre-penetration

text: Colletotrichum graminicola

text: Zea mays

characteristic: organism

text: Zea mays

text: Zea mays


characteristic: INSDC last update

text: public

text: ArrayExpress

characteristic: description

text: necrotrophic

text: Colletotrichum graminicola

text: Zea mays

text: Zea mays

text: Zea mays

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: ArrayExpress

text: penetration

text: Colletotrichum graminicola

text: Zea mays

text: Zea mays

text: Zea mays


characteristic: INSDC first public

text: public

text: ArrayExpress

characteristic: broker name

text: biotrophic

text: Colletotrichum graminicola

text: Zea mays

text: Zea mays

text: Zea mays


text: public

text: ArrayExpress

text: Golden Jubilee

characteristic: cultivar

text: pre-penetration

characteristic: disease staging

text: Colletotrichum graminicola

text: Zea mays

text: Zea mays

text: Zea mays


text: public

text: ArrayExpress

text: Golden Jubilee

text: necrotrophic

text: Colletotrichum graminicola

characteristic: infect

text: Zea mays

text: Zea mays

text: Zea mays

characteristic: time


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: ArrayExpress

text: Golden Jubilee

text: penetration

text: Colletotrichum graminicola

text: Zea mays

text: Zea mays

text: Zea mays


text: public

characteristic: INSDC status

characteristic: SRA accession

text: ArrayExpress

text: Golden Jubilee

text: biotrophic

text: Colletotrichum graminicola

text: Zea mays

text: Zea mays

text: Zea mays


text: CNRS

text: public

characteristic: Submitter Id

text: fruit fly

characteristic: common name

text: Drosophila melanogaster

characteristic: organism

text: Drosophila melanogaster

text: female

characteristic: sex

text: ovary

characteristic: tissue type

text: RNAs from Rpp30-18.2/Rpp30-18.2 ovaries


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CNRS

characteristic: INSDC last update

text: public

text: fruit fly

characteristic: description

text: Drosophila melanogaster

text: Drosophila melanogaster

text: female

text: ovary

text: RNAs from Rpp30-18.2/Rpp30-PE ovaries

characteristic: title


text: CNRS

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: fruit fly

text: Drosophila melanogaster

text: Drosophila melanogaster

text: female

text: ovary

text: RNAs from white virgins ovaries


text: CNRS

text: public

text: fruit fly

text: Drosophila melanogaster

text: Drosophila melanogaster

text: female

text: ovary

text: RNAs from Rpp30-18.2/Rpp30-18.2; ubi-Rpp30-GFP ovaries


text: CNRS

text: public

text: fruit fly

text: Drosophila melanogaster

text: Drosophila melanogaster

text: female

text: ovary

text: RNAs from aub-HN/aub-QC42 ovaries


text: CNRS

text: public

text: fruit fly

text: Drosophila melanogaster

text: Drosophila melanogaster

text: female

text: ovary

text: RNAs from Rpp30-18.2, mnk-P6 ovaries


text: Institute of Tropical Medicine

text: public

text: Concurrentsputum and blood M. tuberculosis previously categorized as identical by spoligotyping and MIRU-VNTR 24 loci

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Concurrent sputum and blood M. tuberculosis


text: CNRS

text: public

text: fruit fly

text: Ovaries were homogenized with a pestle in Trizol (Invitrogen) and were snap frozen and stored at ‐80°C until RNA extraction. RNA was precipitated by standard methods with chloroform, isopropanol, washed in EtOH 70% and resuspended in RNasefree H2O (Sigma). DNA was digested with DNase following the indicated procedure (Ambion). RNA was precipitated with phenol‐chloroform, chloroform, NaAc (0.3M, pH5.5) and isopropanol treatments. RNAs were washed with EtOH 100% and resuspended in RNase‐free H20. RNA quality was controlled by Bioanalyzer 2100 (Agilent technologies). RNA concentration was measured with a Nanodrop (Thermo Scientific) or a Qbit (Invitrogen). For RNA-sequencing (Genomic Paris Centre), 900 ovaries were used for each genotype and for each replicate.

text: Drosophila melanogaster

text: Drosophila melanogaster

text: female

text: ovary

text: RNA from white virgins


text: CNRS

text: public

text: fruit fly

text: Drosophila melanogaster

text: Drosophila melanogaster

text: female

text: ovary

text: RNA from Rpp30-18.2/Rpp30-18.2


text: URMITE

text: public

text: Bacteria abnormis

text: Bacteria abnormis


text: URMITE

text: public

text: Bacteria aborigena

text: Bacteria aborigena


text: UOM

text: public

text: ArrayExpress

characteristic: broker name

text: Protocols: Grown in YPD media at 37oC to exponential phase (OD600 0.5-0.7), pelleted by centrifugation and snap frozen into liquid nitrogen. Some samples were treated with 100uM farnesol for 15minutes before RNA extraction. Samples lysed in Lola lysis buffer using a 6870 Freezer Mill (Spex). Lysates cleared by centrifuging twice at 15000g. For polysome associated samples 10A260 units were loaded onto a polysome gradient, fractionated then polysome fractions pooled. RNA was extracted from polysome associated and Total samples using Trizol Reagent followed by isopropanol precipitation. rRNA was depleted from samples using the Ribo-Zeroâ˘ Magnetic Gold Kit (Yeast) for RNA-Seq (Epicentre, Madison). Depleted samples were ethanol precipitated and re-suspended in 10 ďl DEPC water. Sequencing libraries were generated using the TruSeq Stranded mRNA sample preparation kit from Illumina.

text: total RNA

characteristic: fraction

characteristic: genotype

text: Candida albicans

text: Candida albicans

text: Candida albicans


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UOM

text: public

characteristic: INSDC status

text: ArrayExpress

text: polysome-associated RNA

text: Candida albicans

text: Candida albicans

text: Candida albicans


wildtype

text: COLORADO STATE UNIVERSITY

text: public

characteristic: SRA accession

text: wildtype

tag: Namespace:COLORADO STATE UNIVERSITY

characteristic: Submitter Id

text: sorghum

characteristic: common name

text: IsoSeq Reads from sorghum seedlings

text: Sorghum bicolor

text: Sorghum bicolor

text: sorghum IsoSeq


PEG-treated

text: COLORADO STATE UNIVERSITY

text: public

text: PEG-treated

text: sorghum

text: IsoSeq Reads from sorghum seedlings

text: Sorghum bicolor

characteristic: organism

text: Sorghum bicolor

text: sorghum IsoSeq


DBF

characteristic: ENA-LAST-UPDATE

text: COLUMBIA UNIVERSITY

text: public

text: DBF

tag: Namespace:COLUMBIA UNIVERSITY

text: double-barred finch

text: Taeniopygia bichenovii

text: Taeniopygia bichenovii

text: BAM


Streptomyces venezuelae ATCC 154391

characteristic: External Id

text: public

text: Streptomyces venezuelae ATCC 154391

tag: Namespace:National Center for Genome Resources (NCGR)

text: Here we present the draft genome sequence for a high GC gram+ Streptomyces venezuelae ATCC 15439 isolated from soil near Florence, Italy.

text: Streptomyces venezuelae

text: Streptomyces venezuelae

text: ATCC 15439

characteristic: strain

text: Genome Assembly of Streptomyces venezuelae ATCC 15439


text: COMPLETE GENOMICS

characteristic: INSDC last update

text: public

text: CG_BT474-GS000037241-ASM_BT474_standard_library_A01

tag: Namespace:COMPLETE GENOMICS

characteristic: cell line

text: human

text: Homo sapiens

text: Homo sapiens

text: mammary gland/breast/duct

characteristic: tissue type

text: BT474 whole genome sequence on Complete Genomics standard sequencing platform


tag: attribute

text: COMPLETE GENOMICS

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: CG-BT474-GS01094-CLS_B07_spiked_cancer_20cells_redo

text: human

text: Homo sapiens

text: Homo sapiens

text: mammary gland/breast/duct

text: BT474 whole genome sequence on Complete Genomics LFR sequencing platform

characteristic: title


text: COMPLETE GENOMICS

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: mammary gland/breast/duct


text: MPI-TUEBINGEN

text: public

text: thale cress

text: wildytpe Col-0, replicate 1

characteristic: description

text: adult plant

characteristic: dev stage

characteristic: ecotype

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: vegetative apices

text: The KH domain protein RCF3 is a tissue-specific regulator of the plant miRNA biogenesis cofactor HYL1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: MPI-TUEBINGEN

text: public

characteristic: INSDC status

text: thale cress

text: wildtype Col-0, replicate 2

text: adult plant

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: vegetative apices


text: MPI-TUEBINGEN

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: thale cress

characteristic: common name

text: hyl1-2, replicate 1

text: adult plant

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: vegetative apices


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPI-TUEBINGEN

text: public

text: thale cress

text: hyl1-2, replicate 2

text: adult plant

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: vegetative apices


text: MPI-TUEBINGEN

characteristic: INSDC last update

text: public

text: thale cress

text: rcf3-3, replicate 1

text: adult plant

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: vegetative apices


text: MPI-TUEBINGEN

text: public

text: thale cress

text: rcf3-3, replicate 2

text: adult plant

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: vegetative apices

characteristic: tissue type


text: MPI-TUEBINGEN

characteristic: INSDC center name

text: public

text: thale cress

text: rcf3-4, replicate 1

text: adult plant

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: vegetative apices


text: MPI-TUEBINGEN

characteristic: INSDC first public

text: public

text: thale cress

text: rcf3-4, replicate 2

text: adult plant

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: vegetative apices


text: URMITE

text: public

text: Bacteria ambigua

text: Bacteria ambigua

characteristic: title


text: URMITE

text: public

text: Bacteria baculus

text: Bacteria baculus


text: URMITE

text: public

text: Bacteria apolinari

text: Bacteria apolinari


text: URMITE

text: public

text: Bacteria bahiensis

text: Bacteria bahiensis


text: URMITE

text: public

text: Bacteria aborigena

text: Bacteria aborigena


text: UDS

text: public

text: Canada

characteristic: geographic location (country and/or sea)

text: St Lawrence Valley, Qu�bec

characteristic: geographic location (region and locality)

text: Maple tree bark

characteristic: isolation source

text: Lachancea sp. KF-2015

text: Lachancea sp. KF-2015

text: Lachancea quebecensis, strain LL2011_022 (CBS 14138)


characteristic: ENA-CHECKLIST

text: UDS

text: public

text: Canada

text: Gasp� Peninsula, Qu�bec

text: Oak tree bark

text: Lachancea sp. KF-2015

text: Lachancea sp. KF-2015

text: Lachancea quebecensis, strain LL2012_068


characteristic: ENA-FIRST-PUBLIC

text: UDS

text: public

text: Canada

text: Gasp� Peninsula, Qu�bec

text: Maple tree bark

text: Lachancea sp. KF-2015

text: Lachancea sp. KF-2015

text: Lachancea quebecensis, strain LL2012_073


text: UDS

text: public

characteristic: INSDC status

text: Canada

text: Gasp� Peninsula, Qu�bec

text: Maple tree bark

text: Lachancea sp. KF-2015

text: Lachancea sp. KF-2015

text: Lachancea quebecensis, strain LL2012_078


text: UDS

text: public

characteristic: SRA accession

text: Canada

text: Gasp� Peninsula, Qu�bec

text: Maple tree bark

text: Lachancea sp. KF-2015

text: Lachancea sp. KF-2015

text: Lachancea quebecensis, strain LL2012_083


text: UDS

text: public

characteristic: Submitter Id

text: Canada

text: St Lawrence Valley, Qu�bec

text: Maple tree bark

text: Lachancea sp. KF-2015

text: Lachancea sp. KF-2015

text: Lachancea quebecensis, strain LL2012_095


text: UDS

text: public

text: Canada

text: St Lawrence Valley, Qu�bec

text: Maple tree bark

text: Lachancea sp. KF-2015

text: Lachancea sp. KF-2015

text: Lachancea quebecensis, strain LL2012_118


text: UDS

text: public

text: Canada

text: Mont-St-Anne, Qu�bec

text: Birch tree bark

text: Lachancea sp. KF-2015

text: Lachancea sp. KF-2015

text: Lachancea quebecensis, strain LL2013_162


text: UDS

text: public

text: Canada

text: Mont-St-Anne, Qu�bec

text: Maple tree bark

text: Lachancea sp. KF-2015

text: Lachancea sp. KF-2015

text: Lachancea quebecensis, strain LL2013_164 (CBS 14088)


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

tag: Namespace:THE UNIVERSITY OF WESTERN AUSTRALIA

text: Acacia acuaria

text: Acacia acuaria

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia acuminata

text: Acacia acuminata

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia andrewsii

text: Acacia andrewsii

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia anthochaera

text: Acacia anthochaera

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia ashbyae

text: Acacia ashbyae

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia aulacophylla

text: Acacia aulacophylla

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia blakelyi

text: Acacia blakelyi

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia burkittii

text: Acacia burkittii

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia cerastes

text: Acacia cerastes

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia colletioides

text: Acacia colletioides

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia cyclops

text: Acacia cyclops

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia daphnifolia

text: Acacia daphnifolia

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia diallaga

text: Acacia diallaga

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia effusifolia

text: Acacia effusifolia

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia fragilis

text: Acacia fragilis

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia gibbosa

text: Acacia gibbosa

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia hemiteles

text: Acacia hemiteles

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia inceana subsp. conformis

text: Acacia inceana subsp. conformis

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia jennerae

text: Acacia jennerae

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia jibberdingensis

text: Acacia jibberdingensis

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia karina

text: Acacia karina

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia kochii

text: Acacia kochii

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia lasiocalyx

text: Acacia lasiocalyx

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia longispinea

text: Acacia longispinea

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia merrallii

text: Acacia merrallii

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia murrayana

text: Acacia murrayana

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia obtecta

text: Acacia obtecta

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia oldfieldii

text: Acacia oldfieldii

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia prainii

text: Acacia prainii

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia resinimarginea

text: Acacia resinimarginea

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia restiacea

text: Acacia restiacea

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia rostellifera

text: Acacia rostellifera

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia scirpifolia

text: Acacia scirpifolia

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia sibina

text: Acacia sibina

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia stanleyi

text: Acacia stanleyi

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia sulcaticaulis

text: Acacia sulcaticaulis

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia tetragonophylla

text: Acacia tetragonophylla

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia tysonii

text: Acacia tysonii

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia umbraculiformis

text: Acacia umbraculiformis

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia uncinella

text: Acacia uncinella

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia woodmaniorum

text: Acacia woodmaniorum

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Acacia xanthina

text: Acacia xanthina

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Pararchidendron pruinosum

text: Pararchidendron pruinosum

text: chloroplast genome


text: THE UNIVERSITY OF WESTERN AUSTRALIA

text: public

text: Paraserianthes lophantha subsp. lophantha

text: chloroplast genome


text: CBMSO

text: public

text: house mouse

characteristic: common name

text: Male and or female mice were intra-gastrically gavaged daily with either vehicle control or thiopurine drugs (TG or MP). Caecal content (CC), caecal mucosa (CM) and faeces (F) of WT, Hprt-/- and Winnie mice were collected at day 14 post-TG administration at doses of 0, 0.5 mg/kg. DNA was extracted from faeces at day 0 and day 14; CM and CC at day 14. DNA extracts were used as the template for PCR-based amplification of the bacterial V1-V3 region of the 16S rRNA gene using a barcoded pyrotagging approach, and sequenced with a Roche 454 FLX+ with titanium chemistry. ID type time strain treatment 1 faecal d0 Winnie C 2 faecal d0 Winnie C 3 faecal d0 Winnie C 4 faecal d0 Winnie C 5 faecal d0 Winnie C 6 faecal d0 Winnie C 7 faecal d0 Winnie T 8 faecal d0 Winnie T 9 faecal d0 Winnie T 10 faecal d0 Winnie T 11 faecal d0 Winnie T 12 faecal d0 Winnie T 13 faecal d0 HPRT C 14 faecal d0 HPRT C 15 faecal d0 HPRT C 16 faecal d0 HPRT T 17 faecal d0 HPRT T 18 faecal d0 HPRT T 19 faecal d0 HPRT T 20 faecal d0 HPRT C 21 faecal d0 HPRT C 22 faecal d0 HPRT C 23 faecal d0 HPRT T 24 faecal d0 HPRT T 25 faecal d0 C57 C 26 faecal d0 C57 C 27 faecal d0 C57 C 28 faecal d0 C57 T 29 faecal d0 C57 T 30 faecal d0 C57 T 31 faecal d0 C57 T 32 faecal d0 C57 C 33 faecal d0 C57 C 34 faecal d0 C57 C 35 faecal d0 C57 T 36 faecal d0 C57 T 37 faecal d14 Winnie C 38 faecal d14 Winnie C 39 faecal d14 Winnie C 40 faecal d14 Winnie C 41 faecal d14 Winnie C 42 faecal d14 Winnie C 43 faecal d14 Winnie T 44 faecal d14 Winnie T 45 faecal d14 Winnie T 46 faecal d14 Winnie T 47 faecal d14 Winnie T 48 faecal d14 Winnie T 49 faecal d14 HPRT C 50 faecal d14 HPRT C 51 faecal d14 HPRT C 52 faecal d14 HPRT C 53 faecal d14 HPRT C 54 faecal d14 HPRT C 55 faecal d14 HPRT T 56 faecal d14 HPRT T 57 faecal d14 HPRT T 58 faecal d14 HPRT T 59 faecal d14 HPRT T 60 faecal d14 HPRT T 61 faecal d14 C57 C 62 faecal d14 C57 C 63 faecal d14 C57 C 64 faecal d14 C57 C 65 faecal d14 C57 C 66 faecal d14 C57 C 67 faecal d14 C57 T 68 faecal d14 C57 T 69 faecal d14 C57 T 70 faecal d14 C57 T 71 faecal d14 C57 T 72 faecal d14 C57 T 73 caecal d14 Winnie C 74 caecal d14 Winnie C 75 caecal d14 Winnie C 76 caecal d14 Winnie C 77 caecal d14 Winnie C 78 caecal d14 Winnie C 79 caecal d14 Winnie T 80 caecal d14 Winnie T 81 caecal d14 Winnie T 82 caecal d14 Winnie T 83 caecal d14 Winnie T 84 caecal d14 Winnie T 85 caecal d14 HPRT C 86 caecal d14 HPRT C 87 caecal d14 HPRT C 88 caecal d14 HPRT C 89 caecal d14 HPRT C 90 caecal d14 HPRT C 91 caecal d14 HPRT T 92 caecal d14 HPRT T 93 caecal d14 HPRT T 94 caecal d14 HPRT T 95 caecal d14 HPRT T 96 caecal d14 HPRT T 97 caecal d14 C57 C 98 caecal d14 C57 C 99 caecal d14 C57 C 100 caecal d14 C57 C 101 caecal d14 C57 C 102 caecal d14 C57 C 103 caecal d14 C57 T 104 caecal d14 C57 T 105 caecal d14 C57 T 106 caecal d14 C57 T 107 caecal d14 C57 T 108 caecal d14 C57 T 109 mucosal d14 Winnie C 110 mucosal d14 Winnie C 111 mucosal d14 Winnie C 112 mucosal d14 Winnie C 113 mucosal d14 Winnie C 114 mucosal d14 Winnie C 115 mucosal d14 Winnie T 116 mucosal d14 Winnie T 117 mucosal d14 Winnie T 118 mucosal d14 Winnie T 119 mucosal d14 Winnie T 120 mucosal d14 Winnie T 121 mucosal d14 HPRT C 122 mucosal d14 HPRT C 123 mucosal d14 HPRT C 124 mucosal d14 HPRT C 125 mucosal d14 HPRT C 126 mucosal d14 HPRT C 127 mucosal d14 HPRT T 128 mucosal d14 HPRT T 129 mucosal d14 HPRT T 130 mucosal d14 HPRT T 131 mucosal d14 HPRT T 132 mucosal d14 HPRT T 133 mucosal d14 C57 C 134 mucosal d14 C57 C 135 mucosal d14 C57 C 136 mucosal d14 C57 C 137 mucosal d14 C57 C 138 mucosal d14 C57 C 139 mucosal d14 C57 T 140 mucosal d14 C57 T 141 mucosal d14 C57 T 142 mucosal d14 C57 T 143 mucosal d14 C57 T 144 mucosal d14 C57 T

characteristic: description

text: Mus musculus

text: Mus musculus

text: Thioguanine effects on mice gut microbiota 1a


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CBMSO

text: public

text: house mouse

text: Male and or female mice were intra-gastrically gavaged daily with thiopurine drugs (TG or MP). Caecal content (CC), caecal mucosa (CM) and faeces (F) of Winnie mice were collected at day 14 post-TG administration at doses of 2.5 mg/kg. DNA was extracted from faeces at day 0 and day 14; CM and CC at day 14. DNA extracts were used as the template for PCR-based amplification of the bacterial V1-V3 region of the 16S rRNA gene using a barcoded pyrotagging approach, and sequenced with a Roche 454 FLX+ with titanium chemistry New numbering Name 1 1.1ccB 2 1.2ccB 3 1.1ccR 4 1.2ccR 5 1.3ccR 6 1.4ccR 7 3.1ccB 8 3.1ccR 9 3.2ccR 10 3.3ccR 11 3.4ccB 12 3.5ccB 13 1.1mcB 14 1.2mcB 15 1.1mcR 16 1.2mcR 17 1.3mcR 18 1.4mcR 19 3.1mcB 20 3.1mcR 21 3.2mcR 22 3.3mcR 23 3.4mcB 24 3.5mcB cc caecal contents mc mucosa R female B male

text: Mus musculus

text: Mus musculus

text: Thioguanine effects on mice gut microbiota 2


text: CBMSO

characteristic: INSDC last update

text: public

text: house mouse

text: ale and or female mice were intra-gastrically gavaged daily with either vehicle control or thiopurine drugs (TG or MP). Caecal content (CC), caecal mucosa (CM) and faeces (F) of WT, Hprt-/- and Winnie mice were collected at day 14 post-TG administration at doses of 0, 0.5 mg/kg. DNA was extracted from faeces at day 0 and day 14; CM and CC at day 14. DNA extracts were used as the template for PCR-based amplification of the bacterial V1-V3 region of the 16S rRNA gene using a barcoded pyrotagging approach, and sequenced with a Roche 454 FLX+ with titanium chemistry. ID type time strain treatment 1 faecal d0 Winnie C 2 faecal d0 Winnie C 3 faecal d0 Winnie C 4 faecal d0 Winnie C 5 faecal d0 Winnie C 6 faecal d0 Winnie C 7 faecal d0 Winnie T 8 faecal d0 Winnie T 9 faecal d0 Winnie T 10 faecal d0 Winnie T 11 faecal d0 Winnie T 12 faecal d0 Winnie T 13 faecal d0 HPRT C 14 faecal d0 HPRT C 15 faecal d0 HPRT C 16 faecal d0 HPRT T 17 faecal d0 HPRT T 18 faecal d0 HPRT T 19 faecal d0 HPRT T 20 faecal d0 HPRT C 21 faecal d0 HPRT C 22 faecal d0 HPRT C 23 faecal d0 HPRT T 24 faecal d0 HPRT T 25 faecal d0 C57 C 26 faecal d0 C57 C 27 faecal d0 C57 C 28 faecal d0 C57 T 29 faecal d0 C57 T 30 faecal d0 C57 T 31 faecal d0 C57 T 32 faecal d0 C57 C 33 faecal d0 C57 C 34 faecal d0 C57 C 35 faecal d0 C57 T 36 faecal d0 C57 T 37 faecal d14 Winnie C 38 faecal d14 Winnie C 39 faecal d14 Winnie C 40 faecal d14 Winnie C 41 faecal d14 Winnie C 42 faecal d14 Winnie C 43 faecal d14 Winnie T 44 faecal d14 Winnie T 45 faecal d14 Winnie T 46 faecal d14 Winnie T 47 faecal d14 Winnie T 48 faecal d14 Winnie T 49 faecal d14 HPRT C 50 faecal d14 HPRT C 51 faecal d14 HPRT C 52 faecal d14 HPRT C 53 faecal d14 HPRT C 54 faecal d14 HPRT C 55 faecal d14 HPRT T 56 faecal d14 HPRT T 57 faecal d14 HPRT T 58 faecal d14 HPRT T 59 faecal d14 HPRT T 60 faecal d14 HPRT T 61 faecal d14 C57 C 62 faecal d14 C57 C 63 faecal d14 C57 C 64 faecal d14 C57 C 65 faecal d14 C57 C 66 faecal d14 C57 C 67 faecal d14 C57 T 68 faecal d14 C57 T 69 faecal d14 C57 T 70 faecal d14 C57 T 71 faecal d14 C57 T 72 faecal d14 C57 T 73 caecal d14 Winnie C 74 caecal d14 Winnie C 75 caecal d14 Winnie C 76 caecal d14 Winnie C 77 caecal d14 Winnie C 78 caecal d14 Winnie C 79 caecal d14 Winnie T 80 caecal d14 Winnie T 81 caecal d14 Winnie T 82 caecal d14 Winnie T 83 caecal d14 Winnie T 84 caecal d14 Winnie T 85 caecal d14 HPRT C 86 caecal d14 HPRT C 87 caecal d14 HPRT C 88 caecal d14 HPRT C 89 caecal d14 HPRT C 90 caecal d14 HPRT C 91 caecal d14 HPRT T 92 caecal d14 HPRT T 93 caecal d14 HPRT T 94 caecal d14 HPRT T 95 caecal d14 HPRT T 96 caecal d14 HPRT T 97 caecal d14 C57 C 98 caecal d14 C57 C 99 caecal d14 C57 C 100 caecal d14 C57 C 101 caecal d14 C57 C 102 caecal d14 C57 C 103 caecal d14 C57 T 104 caecal d14 C57 T 105 caecal d14 C57 T 106 caecal d14 C57 T 107 caecal d14 C57 T 108 caecal d14 C57 T 109 mucosal d14 Winnie C 110 mucosal d14 Winnie C 111 mucosal d14 Winnie C 112 mucosal d14 Winnie C 113 mucosal d14 Winnie C 114 mucosal d14 Winnie C 115 mucosal d14 Winnie T 116 mucosal d14 Winnie T 117 mucosal d14 Winnie T 118 mucosal d14 Winnie T 119 mucosal d14 Winnie T 120 mucosal d14 Winnie T 121 mucosal d14 HPRT C 122 mucosal d14 HPRT C 123 mucosal d14 HPRT C 124 mucosal d14 HPRT C 125 mucosal d14 HPRT C 126 mucosal d14 HPRT C 127 mucosal d14 HPRT T 128 mucosal d14 HPRT T 129 mucosal d14 HPRT T 130 mucosal d14 HPRT T 131 mucosal d14 HPRT T 132 mucosal d14 HPRT T 133 mucosal d14 C57 C 134 mucosal d14 C57 C 135 mucosal d14 C57 C 136 mucosal d14 C57 C 137 mucosal d14 C57 C 138 mucosal d14 C57 C 139 mucosal d14 C57 T 140 mucosal d14 C57 T 141 mucosal d14 C57 T 142 mucosal d14 C57 T 143 mucosal d14 C57 T 144 mucosal d14 C57 T

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Thioguanine effects on mice gut microbiota 1b


SH femur fragment AT-5431

text: MPI-EVA

characteristic: INSDC center name

text: public

text: SH femur fragment AT-5431

text: Heidelberg man

text: L30/L35 = lower fragment length cut-off MQ30 = map quality >= 30

text: Sima de los Huesos, Atapuerca, Spain

text: SH femur fragment AT-5431

characteristic: isolate

text: Homo heidelbergensis

text: Homo heidelbergensis

text: nuclear and mitochondrial sequences


SH incisor AT-5482

text: MPI-EVA

characteristic: INSDC first public

text: public

text: SH incisor AT-5482

text: Heidelberg man

text: Sima de los Huesos, Atapuerca, Spain

text: Homo heidelbergensis

text: Homo heidelbergensis

text: nuclear and mitochondrial sequences

characteristic: title


SH scapula AT-6672

text: MPI-EVA

text: public

text: SH scapula AT-6672

text: Heidelberg man

text: Sima de los Huesos, Atapuerca, Spain

characteristic: geographic location (region and locality)

text: Homo heidelbergensis

text: Homo heidelbergensis

text: nuclear and mitochondrial sequences


SH femur XIII

text: MPI-EVA

text: public

text: SH femur XIII

text: Heidelberg man

text: Sima de los Huesos, Atapuerca, Spain

text: Homo heidelbergensis

text: Homo heidelbergensis

text: nuclear sequences


SH molar AT-5444

text: MPI-EVA

text: public

text: SH molar AT-5444

text: Heidelberg man

text: Sima de los Huesos, Atapuerca, Spain

text: Homo heidelbergensis

text: Homo heidelbergensis

text: nuclear and mitochondrial sequences


text: public

tag: Namespace:Whitney Laboratory for Marine Bioscience

text: Patiriella regularis

text: Patiriella regularis

text: Patiriella regularis genome


text: Whitney Laboratory for Marine Bioscience

text: public

text: Patiriella regularis

text: Patiriella regularis

text: Patiriella regularis genome


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

tag: Namespace:UNIVERSITY OF SOUTHERN CALIFORNIA

characteristic: collection date

characteristic: depth

text: surface seawater 16S amplicon from 0.22-1 one micron size fraction

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: water

characteristic: environmental package

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: seawater metagenome

text: Assessing small subunit primers

characteristic: project name

text: seawater metagenome

text: PE Illumina Miseq 2x250

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF SOUTHERN CALIFORNIA

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: M.04.2011.500m.C.926R.fastq.forward.fastq.forward

characteristic: Submitter Id

characteristic: description

text: water

text: metagenome

text: seawater metagenome

characteristic: organism

text: Assessing small subunit primers

text: seawater metagenome

text: PE Illumina Miseq 2x250


text: UNIVERSITY OF SOUTHERN CALIFORNIA

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: M.04.2011.890m.C.926R.fastq.forward.fastq.forward

characteristic: collection date

characteristic: depth

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: water

text: metagenome

text: seawater metagenome

text: Assessing small subunit primers

text: seawater metagenome

text: PE Illumina Miseq 2x250

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: water

characteristic: environmental package

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: seawater metagenome

text: Assessing small subunit primers

characteristic: project name

text: seawater metagenome

text: PE Illumina Miseq 2x300

characteristic: sequencing method


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF SOUTHERN CALIFORNIA

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: M.04.2013.5m.QA.C.926R.fastq.forward.fastq.forward

characteristic: Submitter Id

characteristic: description

text: water

text: metagenome

text: seawater metagenome

characteristic: organism

text: Assessing small subunit primers

text: seawater metagenome

text: PE Illumina Miseq 2x300


text: UNIVERSITY OF SOUTHERN CALIFORNIA

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: M.04.2013.5m.QB.C.926R.fastq.forward.fastq.forward

characteristic: collection date

characteristic: depth

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: water

text: metagenome

text: seawater metagenome

text: Assessing small subunit primers

text: seawater metagenome

text: PE Illumina Miseq 2x300

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: M.08.10.1993.CNSW.8.88.C.806R.fastq.forward

text: water

characteristic: environmental package

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: seawater metagenome

text: Assessing small subunit primers

characteristic: project name

text: seawater metagenome

text: PE Illumina Miseq 2x300

characteristic: sequencing method

text: LongIslandSound.08.na.1988.surface.na.515FC.806R.R1


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF SOUTHERN CALIFORNIA

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: M.08.10.1993.CNSW.8.88.C.926R.fastq.forward

characteristic: Submitter Id

characteristic: description

text: water

text: metagenome

text: seawater metagenome

characteristic: organism

text: Assessing small subunit primers

text: seawater metagenome

text: PE Illumina Miseq 2x300

text: LongIslandSound.08.na.1988.surface.na.515FC.926R.R1


text: UNIVERSITY OF SOUTHERN CALIFORNIA

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: M.08.10.1993.CNSW.8.88.Y.806R.fastq.forward

characteristic: collection date

characteristic: depth

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: water

text: metagenome

text: seawater metagenome

text: Assessing small subunit primers

text: seawater metagenome

text: PE Illumina Miseq 2x300

text: LongIslandSound.08.na.1988.surface.na.515FY.806R.R1

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: M.08.10.1993.CNSW.8.88.Y.926R.fastq.forward.forward.fastq

text: water

characteristic: environmental package

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: seawater metagenome

text: Assessing small subunit primers

characteristic: project name

text: seawater metagenome

text: PE Illumina Miseq 2x300

characteristic: sequencing method

text: LongIslandSound.08.na.1988.surface.na.515FY.926R.R1


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF SOUTHERN CALIFORNIA

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: M.10.2013.5m.C.926R.fastq.forward.forward.fastq

characteristic: Submitter Id

characteristic: description

text: water

text: metagenome

text: seawater metagenome

characteristic: organism

text: Assessing small subunit primers

text: seawater metagenome

text: PE Illumina Miseq 2x300