U501C (fungi; compost)

text: JIC

text: public

text: U501C (fungi; compost)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: unplanted 50ml 1st gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: compost

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

characteristic: potassium

text: soil metagenome

text: Luvisol WRB

characteristic: target subfragment

text: loamy

text: U501C (fungi)


U502A (fungi; compost)

status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: U502A (fungi; compost)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: unplanted 50ml 2nd gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: compost

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

characteristic: soil type

characteristic: target gene

text: loamy

characteristic: texture

text: U502A (fungi)

characteristic: title

type: has member


U502B (fungi; compost)

text: JIC

text: public

text: U502B (fungi; compost)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: unplanted 50ml 2nd gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: compost

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

characteristic: potassium

text: soil metagenome

text: Luvisol WRB

characteristic: target subfragment

text: loamy

text: U502B (fungi)


U502C (fungi; compost)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: U502C (fungi; compost)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: unplanted 50ml 2nd gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: compost

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

characteristic: soil type

characteristic: target gene

text: loamy

text: U502C (fungi)


U503A (fungi; compost)

text: JIC

text: public

text: U503A (fungi; compost)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: unplanted 50ml 3rd gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: compost

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

text: loamy

characteristic: texture

text: U503A (fungi)

characteristic: title


U503B (fungi; compost)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: U503B (fungi; compost)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: unplanted 50ml 3rd gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: compost

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

characteristic: potassium

text: soil metagenome

text: Luvisol WRB

characteristic: target subfragment

text: loamy

text: U503B (fungi)


U503C (fungi; compost)

text: JIC

text: public

text: U503C (fungi; compost)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: unplanted 50ml 3rd gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: compost

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

characteristic: soil type

characteristic: target gene

text: loamy

text: U503C (fungi)


W1A (fungi; compost)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: W1A (fungi; compost)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: wheat 1st gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: compost

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

text: loamy

characteristic: texture

text: W1A (fungi)

characteristic: title


W1B (fungi; compost)

text: JIC

text: public

text: W1B (fungi; compost)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: wheat 1st gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: compost

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

characteristic: potassium

text: soil metagenome

text: Luvisol WRB

characteristic: target subfragment

text: loamy

text: W1B (fungi)


W1C (fungi; compost)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: W1C (fungi; compost)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: wheat 1st gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: compost

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

characteristic: soil type

characteristic: target gene

text: loamy

text: W1C (fungi)


W2A (fungi; compost)

text: JIC

text: public

text: W2A (fungi; compost)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: wheat 2nd gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: compost

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

text: loamy

characteristic: texture

text: W2A (fungi)

characteristic: title


W2B (fungi; compost)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: W2B (fungi; compost)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: wheat 2nd gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: compost

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

characteristic: potassium

text: soil metagenome

text: Luvisol WRB

characteristic: target subfragment

text: loamy

text: W2B (fungi)


W2C (fungi; compost)

text: JIC

text: public

text: W2C (fungi; compost)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: wheat 2nd gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: compost

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

characteristic: soil type

characteristic: target gene

text: loamy

text: W2C (fungi)


W3A (fungi; compost)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: W3A (fungi; compost)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: wheat 3rd gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: compost

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

text: loamy

characteristic: texture

text: W3A (fungi)

characteristic: title


W3B (fungi; compost)

text: JIC

text: public

text: W3B (fungi; compost)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: wheat 3rd gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: compost

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

characteristic: potassium

text: soil metagenome

text: Luvisol WRB

characteristic: target subfragment

text: loamy

text: W3B (fungi)


W3C (fungi; compost)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: W3C (fungi; compost)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: wheat 3rd gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: compost

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

characteristic: soil type

characteristic: target gene

text: loamy

text: W3C (fungi)


A1A (bacteria; sand)

text: JIC

text: public

text: A1A (bacteria; sand)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: Arabidopsis 1st gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sand

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

text: 16S rDNA

text: loamy

characteristic: texture

text: A1A (bacteria)

characteristic: title


A1B (bacteria; sand)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: A1B (bacteria; sand)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: Arabidopsis 1st gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: sand

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

characteristic: potassium

text: soil metagenome

text: Luvisol WRB

text: 16S rDNA

characteristic: target subfragment

text: loamy

text: A1B (bacteria)


A1C (bacteria; sand)

text: JIC

text: public

text: A1C (bacteria; sand)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: Arabidopsis 1st gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sand

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

characteristic: soil type

text: 16S rDNA

characteristic: target gene

text: loamy

text: A1C (bacteria)


M1A (bacteria; sand)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: M1A (bacteria; sand)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: Medicago 1st gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: sand

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

text: 16S rDNA

text: loamy

characteristic: texture

text: M1A (bacteria)

characteristic: title


M1B (bacteria; sand)

text: JIC

text: public

text: M1B (bacteria; sand)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: Medicago 1st gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sand

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

characteristic: potassium

text: soil metagenome

text: Luvisol WRB

text: 16S rDNA

characteristic: target subfragment

text: loamy

text: M1B (bacteria)


M1C (bacteria; sand)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: M1C (bacteria; sand)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: Medicago 1st gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: sand

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

characteristic: soil type

text: 16S rDNA

characteristic: target gene

text: loamy

text: M1C (bacteria)


B1A (bacteria; sand)

text: JIC

text: public

text: B1A (bacteria; sand)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: Brachypodium 1st gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sand

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

text: 16S rDNA

text: loamy

characteristic: texture

text: B1A (bacteria)

characteristic: title


B1B (bacteria; sand)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: B1B (bacteria; sand)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: Brachypodium 1st gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: sand

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

characteristic: potassium

text: soil metagenome

text: Luvisol WRB

text: 16S rDNA

characteristic: target subfragment

text: loamy

text: B1B (bacteria)


B1C (bacteria; sand)

text: JIC

text: public

text: B1C (bacteria; sand)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: Brachypodium 1st gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sand

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

characteristic: soil type

text: 16S rDNA

characteristic: target gene

text: loamy

text: B1C (bacteria)


U1A (bacteria; sand)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: U1A (bacteria; sand)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: unplanted 50ml 1st gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: sand

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

text: 16S rDNA

text: loamy

characteristic: texture

text: U1A (bacteria)

characteristic: title


U1B (bacteria; sand)

text: JIC

text: public

text: U1B (bacteria; sand)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: unplanted 50ml 1st gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sand

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

characteristic: potassium

text: soil metagenome

text: Luvisol WRB

text: 16S rDNA

characteristic: target subfragment

text: loamy

text: U1B (bacteria)


U1C (bacteria; sand)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: U1C (bacteria; sand)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: unplanted 50ml 1st gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: sand

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

characteristic: soil type

text: 16S rDNA

characteristic: target gene

text: loamy

text: U1C (bacteria)


A2A (bacteria; sand)

text: JIC

text: public

text: A2A (bacteria; sand)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: Arabidopsis 2nd gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sand

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

text: 16S rDNA

text: loamy

characteristic: texture

text: A2A (bacteria)

characteristic: title


A2B (bacteria; sand)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: A2B (bacteria; sand)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: Arabidopsis 2nd gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: sand

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

characteristic: potassium

text: soil metagenome

text: Luvisol WRB

text: 16S rDNA

characteristic: target subfragment

text: loamy

text: A2B (bacteria)


A2C (bacteria; sand)

text: JIC

text: public

text: A2C (bacteria; sand)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: Arabidopsis 2nd gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sand

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

characteristic: soil type

text: 16S rDNA

characteristic: target gene

text: loamy

text: A2C (bacteria)


M2A (bacteria; sand)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: M2A (bacteria; sand)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: Medicago 2nd gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: sand

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

text: 16S rDNA

text: loamy

characteristic: texture

text: M2A (bacteria)

characteristic: title


M2B (bacteria; sand)

text: JIC

text: public

text: M2B (bacteria; sand)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: Medicago 2nd gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sand

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

characteristic: potassium

text: soil metagenome

text: Luvisol WRB

text: 16S rDNA

characteristic: target subfragment

text: loamy

text: M2B (bacteria)


M2C (bacteria; sand)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: M2C (bacteria; sand)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: Medicago 2nd gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: sand

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

characteristic: soil type

text: 16S rDNA

characteristic: target gene

text: loamy

text: M2C (bacteria)


B2A (bacteria; sand)

text: JIC

text: public

text: B2A (bacteria; sand)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: Brachypodium 2nd gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sand

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

text: 16S rDNA

text: loamy

characteristic: texture

text: B2A (bacteria)

characteristic: title


B2B (bacteria; sand)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: B2B (bacteria; sand)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: Brachypodium 2nd gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: sand

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

characteristic: potassium

text: soil metagenome

text: Luvisol WRB

text: 16S rDNA

characteristic: target subfragment

text: loamy

text: B2B (bacteria)


B2C (bacteria; sand)

text: JIC

text: public

text: B2C (bacteria; sand)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: Brachypodium 2nd gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sand

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

characteristic: soil type

text: 16S rDNA

characteristic: target gene

text: loamy

text: B2C (bacteria)


U2A (bacteria; sand)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: U2A (bacteria; sand)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: unplanted 50ml 2nd gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: sand

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

text: 16S rDNA

text: loamy

characteristic: texture

text: U2A (bacteria)

characteristic: title


U2B (bacteria; sand)

text: JIC

text: public

text: U2B (bacteria; sand)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: unplanted 50ml 2nd gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sand

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

characteristic: potassium

text: soil metagenome

text: Luvisol WRB

text: 16S rDNA

characteristic: target subfragment

text: loamy

text: U2B (bacteria)


U2C (bacteria; sand)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: U2C (bacteria; sand)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: unplanted 50ml 2nd gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: sand

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

characteristic: soil type

text: 16S rDNA

characteristic: target gene

text: loamy

text: U2C (bacteria)


A3A (bacteria; sand)

text: JIC

text: public

text: A3A (bacteria; sand)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: Arabidopsis 3rd gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sand

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

text: 16S rDNA

text: loamy

characteristic: texture

text: A3A (bacteria)

characteristic: title


A3B (bacteria; sand)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: A3B (bacteria; sand)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: Arabidopsis 3rd gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: sand

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

characteristic: potassium

text: soil metagenome

text: Luvisol WRB

text: 16S rDNA

characteristic: target subfragment

text: loamy

text: A3B (bacteria)


A3C (bacteria; sand)

text: JIC

text: public

text: A3C (bacteria; sand)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: Arabidopsis 3rd gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sand

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

characteristic: soil type

text: 16S rDNA

characteristic: target gene

text: loamy

text: A3C (bacteria)


M3A (bacteria; sand)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: M3A (bacteria; sand)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: Medicago 3rd gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: sand

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

text: 16S rDNA

text: loamy

characteristic: texture

text: M3A (bacteria)

characteristic: title


M3B (bacteria; sand)

text: JIC

text: public

text: M3B (bacteria; sand)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: Medicago 3rd gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sand

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

characteristic: potassium

text: soil metagenome

text: Luvisol WRB

text: 16S rDNA

characteristic: target subfragment

text: loamy

text: M3B (bacteria)


M3C (bacteria; sand)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: M3C (bacteria; sand)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: Medicago 3rd gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: sand

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

characteristic: soil type

text: 16S rDNA

characteristic: target gene

text: loamy

text: M3C (bacteria)


B3A (bacteria; sand)

text: JIC

text: public

text: B3A (bacteria; sand)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: Brachypodium 3rd gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sand

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

text: 16S rDNA

text: loamy

characteristic: texture

text: B3A (bacteria)

characteristic: title


B3B (bacteria; sand)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: B3B (bacteria; sand)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: Brachypodium 3rd gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: sand

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

characteristic: potassium

text: soil metagenome

text: Luvisol WRB

text: 16S rDNA

characteristic: target subfragment

text: loamy

text: B3B (bacteria)


B3C (bacteria; sand)

text: JIC

text: public

text: B3C (bacteria; sand)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: Brachypodium 3rd gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sand

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

characteristic: soil type

text: 16S rDNA

characteristic: target gene

text: loamy

text: B3C (bacteria)


U3A (bacteria; sand)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: U3A (bacteria; sand)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: unplanted 50ml 3rd gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: sand

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

text: 16S rDNA

text: loamy

characteristic: texture

text: U3A (bacteria)

characteristic: title


U3B (bacteria; sand)

text: JIC

text: public

text: U3B (bacteria; sand)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: unplanted 50ml 3rd gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sand

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

characteristic: potassium

text: soil metagenome

text: Luvisol WRB

text: 16S rDNA

characteristic: target subfragment

text: loamy

text: U3B (bacteria)


U3C (bacteria; sand)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: U3C (bacteria; sand)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: unplanted 50ml 3rd gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: sand

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

characteristic: soil type

text: 16S rDNA

characteristic: target gene

text: loamy

text: U3C (bacteria)


A1A (fungi; sand)

text: JIC

text: public

text: A1A (fungi; sand)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: Arabidopsis 1st gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sand

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

text: loamy

characteristic: texture

text: A1A (fungi)

characteristic: title


A1B (fungi; sand)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: A1B (fungi; sand)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: Arabidopsis 1st gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: sand

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

characteristic: potassium

text: soil metagenome

text: Luvisol WRB

characteristic: target subfragment

text: loamy

text: A1B (fungi)


A1C (fungi; sand)

text: JIC

text: public

text: A1C (fungi; sand)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: Arabidopsis 1st gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sand

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

characteristic: soil type

characteristic: target gene

text: loamy

text: A1C (fungi)


M1A (fungi; sand)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: M1A (fungi; sand)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: Medicago 1st gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: sand

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

text: loamy

characteristic: texture

text: M1A (fungi)

characteristic: title


M1B (fungi; sand)

text: JIC

text: public

text: M1B (fungi; sand)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: Medicago 1st gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sand

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

characteristic: potassium

text: soil metagenome

text: Luvisol WRB

characteristic: target subfragment

text: loamy

text: M1B (fungi)


M1C (fungi; sand)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: M1C (fungi; sand)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: Medicago 1st gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: sand

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

characteristic: soil type

characteristic: target gene

text: loamy

text: M1C (fungi)


B1A (fungi; sand)

text: JIC

text: public

text: B1A (fungi; sand)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: Brachypodium 1st gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sand

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

text: loamy

characteristic: texture

text: B1A (fungi)

characteristic: title


B1B (fungi; sand)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: B1B (fungi; sand)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: Brachypodium 1st gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: sand

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

characteristic: potassium

text: soil metagenome

text: Luvisol WRB

characteristic: target subfragment

text: loamy

text: B1B (fungi)


B1C (fungi; sand)

text: JIC

text: public

text: B1C (fungi; sand)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: Brachypodium 1st gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sand

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

characteristic: soil type

characteristic: target gene

text: loamy

text: B1C (fungi)


U1A (fungi; sand)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: U1A (fungi; sand)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: unplanted 50ml 1st gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: sand

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

text: loamy

characteristic: texture

text: U1A (fungi)

characteristic: title


U1B (fungi; sand)

text: JIC

text: public

text: U1B (fungi; sand)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: unplanted 50ml 1st gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sand

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

characteristic: potassium

text: soil metagenome

text: Luvisol WRB

characteristic: target subfragment

text: loamy

text: U1B (fungi)


U1C (fungi; sand)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: U1C (fungi; sand)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: unplanted 50ml 1st gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: sand

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

characteristic: soil type

characteristic: target gene

text: loamy

text: U1C (fungi)


A2A (fungi; sand)

text: JIC

text: public

text: A2A (fungi; sand)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: Arabidopsis 2nd gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sand

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

text: loamy

characteristic: texture

text: A2A (fungi)

characteristic: title


A2B (fungi; sand)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: A2B (fungi; sand)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: Arabidopsis 2nd gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: sand

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

characteristic: potassium

text: soil metagenome

text: Luvisol WRB

characteristic: target subfragment

text: loamy

text: A2B (fungi)


A2C (fungi; sand)

text: JIC

text: public

text: A2C (fungi; sand)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: Arabidopsis 2nd gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sand

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

characteristic: soil type

characteristic: target gene

text: loamy

text: A2C (fungi)


M2A (fungi; sand)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: M2A (fungi; sand)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: Medicago 2nd gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: sand

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

text: loamy

characteristic: texture

text: M2A (fungi)

characteristic: title


M2B (fungi; sand)

text: JIC

text: public

text: M2B (fungi; sand)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: Medicago 2nd gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sand

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

characteristic: potassium

text: soil metagenome

text: Luvisol WRB

characteristic: target subfragment

text: loamy

text: M2B (fungi)


M2C (fungi; sand)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: M2C (fungi; sand)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: Medicago 2nd gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: sand

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

characteristic: soil type

characteristic: target gene

text: loamy

text: M2C (fungi)


B2A (fungi; sand)

text: JIC

text: public

text: B2A (fungi; sand)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: Brachypodium 2nd gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sand

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

text: loamy

characteristic: texture

text: B2A (fungi)

characteristic: title


B2B (fungi; sand)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: B2B (fungi; sand)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: Brachypodium 2nd gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: sand

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

characteristic: potassium

text: soil metagenome

text: Luvisol WRB

characteristic: target subfragment

text: loamy

text: B2B (fungi)


B2C (fungi; sand)

text: JIC

text: public

text: B2C (fungi; sand)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: Brachypodium 2nd gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sand

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

characteristic: soil type

characteristic: target gene

text: loamy

text: B2C (fungi)


U2A (fungi; sand)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: U2A (fungi; sand)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: unplanted 50ml 2nd gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: sand

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

text: loamy

characteristic: texture

text: U2A (fungi)

characteristic: title


U2B (fungi; sand)

text: JIC

text: public

text: U2B (fungi; sand)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: unplanted 50ml 2nd gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sand

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

characteristic: potassium

text: soil metagenome

text: Luvisol WRB

characteristic: target subfragment

text: loamy

text: U2B (fungi)


U2C (fungi; sand)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: U2C (fungi; sand)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: unplanted 50ml 2nd gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: sand

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

characteristic: soil type

characteristic: target gene

text: loamy

text: U2C (fungi)


A3A (fungi; sand)

text: JIC

text: public

text: A3A (fungi; sand)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: Arabidopsis 3rd gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sand

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

text: loamy

characteristic: texture

text: A3A (fungi)

characteristic: title


A3B (fungi; sand)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: A3B (fungi; sand)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: Arabidopsis 3rd gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: sand

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

characteristic: potassium

text: soil metagenome

text: Luvisol WRB

characteristic: target subfragment

text: loamy

text: A3B (fungi)


A3C (fungi; sand)

text: JIC

text: public

text: A3C (fungi; sand)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: Arabidopsis 3rd gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sand

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

characteristic: soil type

characteristic: target gene

text: loamy

text: A3C (fungi)


M3A (fungi; sand)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: M3A (fungi; sand)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: Medicago 3rd gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: sand

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

text: loamy

characteristic: texture

text: M3A (fungi)

characteristic: title


M3B (fungi; sand)

text: JIC

text: public

text: M3B (fungi; sand)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: Medicago 3rd gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sand

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

characteristic: potassium

text: soil metagenome

text: Luvisol WRB

characteristic: target subfragment

text: loamy

text: M3B (fungi)


M3C (fungi; sand)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: M3C (fungi; sand)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: Medicago 3rd gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: sand

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

characteristic: soil type

characteristic: target gene

text: loamy

text: M3C (fungi)


B3A (fungi; sand)

text: JIC

text: public

text: B3A (fungi; sand)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: Brachypodium 3rd gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sand

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

text: loamy

characteristic: texture

text: B3A (fungi)

characteristic: title


B3B (fungi; sand)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: B3B (fungi; sand)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: Brachypodium 3rd gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: sand

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

characteristic: potassium

text: soil metagenome

text: Luvisol WRB

characteristic: target subfragment

text: loamy

text: B3B (fungi)


B3C (fungi; sand)

text: JIC

text: public

text: B3C (fungi; sand)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: Brachypodium 3rd gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sand

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

characteristic: soil type

characteristic: target gene

text: loamy

text: B3C (fungi)


U3A (fungi; sand)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: U3A (fungi; sand)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: unplanted 50ml 3rd gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: sand

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

text: loamy

characteristic: texture

text: U3A (fungi)

characteristic: title


U3B (fungi; sand)

text: JIC

text: public

text: U3B (fungi; sand)

text: abandoned grassland

text: grass

characteristic: current vegetation

text: 0.1-0.3 m

characteristic: depth

text: unplanted 50ml 3rd gen

text: UK; Norfolk; Bawburgh; JIC Church Farm

characteristic: geographic location (country and/or sea, region)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sand

text: 33.55 mg/kg

characteristic: magnesium

text: 3.49 mg/kg

characteristic: nitrate

text: doi: 10.1128/AEM.66.12.5488-5491.2000

characteristic: nucleic acid extraction

characteristic: organic matter

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

text: 120.5 mg/kg

characteristic: phosphate

text: 168.2 mg/kg

characteristic: potassium

text: soil metagenome

text: Luvisol WRB

characteristic: target subfragment

text: loamy

text: U3B (fungi)


U3C (fungi; sand)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: U3C (fungi; sand)

characteristic: Submitter Id

text: abandoned grassland

characteristic: current land use

text: grass

text: 0.1-0.3 m

text: unplanted 50ml 3rd gen

characteristic: description

text: UK; Norfolk; Bawburgh; JIC Church Farm

text: sand

text: 33.55 mg/kg

text: 3.49 mg/kg

text: doi: 10.1128/AEM.66.12.5488-5491.2000

text: soil metagenome

text: 120.5 mg/kg

text: 168.2 mg/kg

text: soil metagenome

text: Luvisol WRB

characteristic: soil type

characteristic: target gene

text: loamy

text: U3C (fungi)


text: CARDIFF UNIVERSITY

text: public

tag: Namespace:CARDIFF UNIVERSITY

text: Acinetobacter bereziniae isolate from pus sample, harbouring blaNDM-1 gene.

text: Acinetobacter bereziniae

characteristic: organism

text: Acinetobacter bereziniae

characteristic: strain

text: Acinetobacter bereziniae CHI-40-1

characteristic: title


characteristic: ENA-CHECKLIST

text: public

characteristic: collection date

text: Germany

characteristic: geographic location (country and/or sea)

text: Acinetobacter baumannii

text: Acinetobacter baumannii


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Germany

text: Acinetobacter baumannii

text: Acinetobacter baumannii


text: LEIDEN UNIVERSITY MEDICAL CENTER

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:LEIDEN UNIVERSITY MEDICAL CENTER

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

characteristic: environmental package

characteristic: geographic location (altitude)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: investigation type

text: Peptoclostridium difficile

characteristic: project name

text: Peptoclostridium difficile

characteristic: sequencing method

text: Clostridium difficile 630Derm


characteristic: ENA-CHECKLIST

text: LEIDEN UNIVERSITY MEDICAL CENTER

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Peptoclostridium difficile

characteristic: organism

text: Peptoclostridium difficile

characteristic: strain

text: Clostridium difficile 630Derm

characteristic: title


draft assembly

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: FRIEDRICH SCHILLER UNIVERSITY JENA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: draft assembly

tag: Namespace:FRIEDRICH SCHILLER UNIVERSITY JENA

text: plus

text: Parasitella parasitica

text: Parasitella parasitica

text: CBS 412.66

text: NGI-315 ade-

text: Genome sequence of the mucoralean fusion parasite Parasitella parasitica


text: LEIDEN UNIVERSITY MEDICAL CENTER

text: public

text: Bacillus subtilis

text: Bacillus subtilis

text: Bacillus subtilis strain BS49


text: PNRI

text: public

text: baker's yeast

characteristic: common name

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: IPF

text: public

text: P.halstedii genome and annotations

characteristic: description

text: Plasmopara halstedii

text: Plasmopara halstedii

text: P.halstedii genome and annotations


text: IPF

text: public

text: Ceraceosorus bombacis genome

text: Ceraceosorus bombacis

text: Ceraceosorus bombacis

text: Ceraceosorus bombacis genome


text: USMHRP,WRAIR

text: public

text: human

text: Homo sapiens

text: Homo sapiens


1host root

text: ARO-NYRC

text: public

text: 1host root

text: Orobanche aegyptiaca

text: Orobanche aegyptiaca

text: endophytes in parasitic plants and host


text: ICDC

text: public

text: V. cholerae

text: Vibrio cholerae

text: Vibrio cholerae

text: 3247 O1 El Tor


text: ICDC

text: public

text: V.cholerae

text: Vibrio cholerae

text: Vibrio cholerae

text: E506 O1 El Tor


text: ED

text: public

text: house mouse

text: control embryo pool 4

text: Mus musculus

text: Mus musculus


text: ED

text: public

text: house mouse

text: mutant embryo pool 4

text: Mus musculus

text: Mus musculus


text: ED

text: public

text: house mouse

text: mutant embryo pool 3

text: Mus musculus

text: Mus musculus


text: ED

text: public

text: house mouse

text: mutant embryo pool 2

text: Mus musculus

text: Mus musculus


text: ED

text: public

text: house mouse

text: mutant embryo pool 1

text: Mus musculus

text: Mus musculus


text: ED

text: public

text: house mouse

text: control embryo pool 2

text: Mus musculus

text: Mus musculus


text: ED

text: public

text: house mouse

text: control embryo pool 1

text: Mus musculus

text: Mus musculus


text: ED

text: public

text: house mouse

text: control embryo pool 3

text: Mus musculus

text: Mus musculus


text: ANSES

text: public

text: Anaplasma phagocytophilum

text: Anaplasma phagocytophilum

text: Anaplasma phagocytophilum

text: Anaplasma phagocytophilum


text: PERIO-UKM

text: public

characteristic: collection date

text: Israel

characteristic: geographic location (country and/or sea)

text: Legionella pneumophila

text: Legionella pneumophila


endophyte in O.aegyptiaca1

characteristic: ENA-CHECKLIST

text: ARO-NYRC

text: public

text: endophyte in O.aegyptiaca1

text: Orobanche aegyptiaca

text: Orobanche aegyptiaca

text: endophytes in parasitic plant and host


endophyte in O.aegyptiaca2

text: ARO-NYRC

text: public

characteristic: INSDC status

text: endophyte in O.aegyptiaca2

text: Orobanche aegyptiaca

text: Orobanche aegyptiaca

text: endophytes in parasitic plant and host


endophyte in O.aegyptiaca3

text: ARO-NYRC

text: public

characteristic: SRA accession

text: endophyte in O.aegyptiaca3

text: Orobanche aegyptiaca

text: Orobanche aegyptiaca

text: endophytes in parasitic plant and host


host endophytes1

text: ARO-NYRC

text: public

text: host endophytes1

characteristic: Submitter Id

text: tomato

text: Solanum lycopersicum

text: Solanum lycopersicum

text: endopytic bacteria in parasitic weed and host


host endophytes2

text: ARO-NYRC

text: public

text: host endophytes2

text: tomato

text: Solanum lycopersicum

characteristic: organism

text: Solanum lycopersicum


infected host endophytes3

text: ARO-NYRC

text: public

text: infected host endophytes3

text: tomato

text: Solanum lycopersicum

text: Solanum lycopersicum


text: BANG

text: public

text: Jacek M. Szymura

text: 30 June 2010

text: fire-bellied toad

text: Adult

text: Sedziejowice, Poland

text: Bombina bombina

text: Bombina bombina

text: Liver


text: BANG

text: public

text: Jacek M. Szymura

text: Adult

text: Biala Woda, near Szczawnica, Poland

text: Bombina variegata variegata

text: Bombina variegata variegata

text: Liver


text: BANG

text: public

text: Adult

text: Rhodope Mountains, Bulgaria

text: Bombina variegata scabra

text: Bombina variegata scabra

text: Liver


text: BANG

text: public

text: Adult

text: Bombina orientalis

text: Bombina orientalis

text: Liver


text: GIST

text: public

text: uncultured bacterium

text: uncultured bacterium


PooledNorwegianSchisto

text: MPI-EVB

text: public

text: PooledNorwegianSchisto

text: Martin Kalbe and Per Jakobsen

characteristic: collected by

text: A pooled sample of 6 individuals from a Norwegian Schistocephalus solidus population

text: Norway

text: Gasterosteus aculeatus

characteristic: host

text: 60deg 14min 44sec N, 5deg 55min 03sec E

characteristic: lat lon

text: Schistocephalus solidus

text: Schistocephalus solidus

text: Pooled Sample of Norwegian Schistocephalus solidus


PooledGermanSchisto

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: MPI-EVB

text: public

text: PooledGermanSchisto

text: Martin Kalbe

text: A pooled sample of 6 individuals from a German Schistocephalus solidus population

text: Germany

text: Gasterosteus aculeatus

text: 54deg 06min 40sec N, 10deg 48min 50sec E

text: Schistocephalus solidus

text: Schistocephalus solidus

text: Pooled Sample of German Schistocephalus solidus

characteristic: title


E-MTAB-2953:Sample 2

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-2953:Sample 2

tag: Namespace:Swedish University of Agricultural Sciences, SLU

text: ArrayExpress

characteristic: broker name

text: Leaves were collected before infection and at 24 and 48 hours after infection by P. infestans (isolate SE-03058). Samples were pooled for each species. Protocols: RNA was isolated by RNeasy Plant Mini Kit (Qiagen) Beads with oligo(dT) were used to isolate poly(A) mRNA. Fragmentation buffer was added for interrupting mRNA to short fragments. Taking these short fragments as templates, Random hexamerprimer were used to synthesize the first-strand cDNA. The second-strand cDNA was synthesized using buffer, dNTPs, RNase H and DNA polymerase I, respectively. Short fragments were purified with QiaQuick PCR extraction kit and resolved with EB buffer for end reparation and adding poly(A). After that, the short fragments were connected with sequencing adaptors. And, for amplification with PCR, we selected suitable fragments, as templates, with respect to the result of agarose gel electrophoresis.

text: Solanum dulcamara

text: Solanum dulcamara

text: detached leaves

characteristic: organism part

text: Solanum dulcamara

text: Sample 2


E-MTAB-2953:Sample 3

text: Swedish University of Agricultural Sciences, SLU

characteristic: INSDC last update

text: public

text: E-MTAB-2953:Sample 3

text: ArrayExpress

characteristic: description

text: Solanum physalifolium

text: Solanum physalifolium

text: detached leaves

text: Solanum physalifolium

text: Sample 3


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF DUISBURG-ESSEN

text: public

characteristic: INSDC status

characteristic: MYCN status

tag: Namespace:UNIVERSITY OF DUISBURG-ESSEN

characteristic: Survival

text: human

characteristic: common name

text: primary NB were analysed with respect to clinical variable MYCN status (0= normal, 1=amplified) or Survival (0=alive, 1= dead)

text: Homo sapiens

text: Homo sapiens

text: RNA-seq of primary neuroblastoma


text: URMITE

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Planomicrobium sp. ES2

characteristic: organism

text: Planomicrobium sp. ES2

characteristic: strain


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: MPI-TUEBINGEN

text: public

text: Capsella orientalis

text: Capsella orientalis

characteristic: title


characteristic: External Id

text: MPI-TUEBINGEN

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Capsella rubella

text: Capsella rubella


text: PERIO-UKM

characteristic: INSDC last update

text: public

text: Jul 1, 2010

characteristic: collection date

text: Germany

characteristic: geographic location (country and/or sea)

text: Francisella tularensis

text: Francisella tularensis


characteristic: ENA-CHECKLIST

text: URMITE

text: public

characteristic: INSDC status

text: Bacillus sp. B-jedd

text: Bacillus sp. B-jedd

text: B-jedd

text: Bacillus jeddahtimonense


text: DISAAUNIMI

text: public

text: red palm weevil

text: Rhynchophorus ferrugineus

text: Rhynchophorus ferrugineus

text: weevil


text: DISAAUNIMI

text: public

text: Rhynchophorus vulneratus

text: Rhynchophorus vulneratus

text: weevil


NadA library

text: UNIVERSITY OF MESSINA

text: public

text: NadA library

tag: Namespace:UNIVERSITY OF MESSINA

text: Neisseria meningitidis MC58

text: Neisseria meningitidis MC58

text: NadA lambda displayed libraries


1 selection round

text: UNIVERSITY OF MESSINA

text: public

text: 1 selection round

text: Neisseria meningitidis MC58

text: Neisseria meningitidis MC58

text: NadA lambda displayed libraries


2 selection round

text: UNIVERSITY OF MESSINA

text: public

text: 2 selection round

text: Neisseria meningitidis MC58

text: Neisseria meningitidis MC58

text: NadA lambda displayed libraries


text: UPPSALA UNIVERSITET

text: public

tag: Namespace:UPPSALA UNIVERSITET

text: killer whale

characteristic: description

text: Orcinus orca

text: Orcinus orca


text: Sequence reads of 50 or 51 base length originating from each sample were aligned, using Bowtie 0.12.725, to the S. pombe genome sequence (Ensembl S. pombe, Build EF1, release 13) and to the corresponding exon-exon junctions database. Up to 3 base-pair mismatches were allowed. Reads that matched multiple loci were removed from further analysis, and the resultant alignment files were processed to generate ‘pile-ups’ against each chromosome. Importantly, throughout our exon-skipping analysis we used only canonical and non-canonical exon-exon junction reads and reads that straddle the exon-intron boundaries, while the remaining reads were ignored. Therefore, expression levels are not provided. Searches were performed against the genome sequence combined with a database of all possible exon-exon junction sequences that could be generated from Ensembl S. pombe annotation (release-13). To ensure that an ‘X’-base read is mapped to a splice junction (see Supplementary Table S1 for exact read length), only the last (‘X’-6) bases of the first exon and the first (‘X’-6) bases of the second exon were considered (if the exon exceeded length ‘X’-6). In this way, reads that overlapped a junction by less than 6 nucleotides were excluded. Reads that matched to more than one junction or elsewhere in the genome were also discarded.

characteristic: Data processing step

text: Dbitton

text: public

text: RNA-seq libraries were prepared using a strand-specific library preparation protocol based on an early version of the Illumina TruSeq Small RNA Sample Prep Kit. In brief, rRNA-depleted RNA was fragmented to an average size of ~200nt. Fragmented RNA was 3’-de-phosphorylated with Antartic phosphatase and 5’-phosphorylated with polynucleotide kinase; this treatment prepares RNA fragments for subsequent ligation of Illumina RNA adaptors to their 5’ and 3’ ends using a 3’-RNA ligase and a T4 RNA ligase, respectively. First-strand cDNA was produced using a primer specific for the Illumina 3’-adaptor. The library was amplified with 15 PCR cycles using primers specific for the Illumina adaptors and purified using SPRI-beads (Agencourt, Beckman Coulter). Library size distributions and concentrations were determined on a Bioanalyzer (Agilent). RNA-seq libraries were sequenced on an Illumina HiSeq 2000 instrument (apart from nmt1-rpb1 sequenced on Genome Analyzer II).

characteristic: Library constraction protocol

text: fission yeast

characteristic: common name

text: nmt1-rpb4 cells were grown YES with 15M thiamine for 18 hours at 32°C.

text: Cells from all cultures were harvested at mid-log phase (optical density, OD600nm = 0.5) and total RNA was isolated by hot-phenol extraction, and RNA quality was assessed on a Bioanalyzer instrument (Agilent). For ribosomal depleted cultures: total RNA was treated with DNase (Turbo DNA-free by ambion), and thereafter 4 μg was treated with a Ribo-Zero™ Magnetic Gold Kit (Yeast) to deplete rRNAs. For poly-(A) enriched cultures: poly(A)+RNA was enriched by two rounds of poly(dT) Sera-Mag magnetic bead purification.

characteristic: extraction protocol

text: kanMX6-p81nmt1-rpb4 h-

characteristic: genotype

text: Strand Specific RNA-seq.poly-(A) enriched

characteristic: library strategy

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe

text: Transcription compromised strain


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Dbitton

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: fission yeast

text: For dhp1-ts cultures were grown at 32°C in rich medium (YES) and then were heat-shocked at 36°C for 4 hours.

text: h+ ade6‐M216 ura4‐D18 leu1‐32 dhp1‐1::ura4+

text: Schizosaccharomyces pombe

characteristic: organism

text: Schizosaccharomyces pombe

text: 5'-3' nuclear exonuclease compromised strain.


characteristic: External Id

text: Dbitton

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: fission yeast

text: Wild-type cultures were grown at 32°C in YES medium

text: leu1-32 h-

text: Strand Specific RNA-seq. poly-(A) enriched

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe

text: Wild-type at vegetative growth

characteristic: title


characteristic: ENA-CHECKLIST

text: Dbitton

text: public

characteristic: INSDC status

text: fission yeast

text: For prp2-ts: cultures were grown at 32°C in rich medium (YES) and then were heat-shocked at 37°C for 2.5 hours.

characteristic: description

text: prp2-1 leu1-32 h-

text: Strand Specific RNA-seq. Ribo-Zero™ Magnetic Gold Kit (Yeast)

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe

text: Splicing compromised strain


characteristic: Data processing step

text: Dbitton

text: public

characteristic: Library constraction protocol

text: fission yeast

characteristic: common name

text: prp2-1 leu1-32 h-

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe

text: Splicing compromised strain.


text: INRA STLO

text: public

tag: Namespace:INRA STLO

characteristic: collection date

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

characteristic: environmental package

characteristic: geographic location (altitude)

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: investigation type

text: Propionibacterium freudenreichii

characteristic: project name

text: Propionibacterium freudenreichii

characteristic: sequencing method

text: CIRM-BIA 118

characteristic: strain

text: CIRM-BIA 118


Ancestor

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LIV

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Ancestor

characteristic: Submitter Id

characteristic: description

text: Enterococcus faecalis

characteristic: organism

text: Enterococcus faecalis

text: E faecalis resequence

characteristic: title


text: LIV

text: public

text: Enterococcus faecalis

text: Enterococcus faecalis

text: E faecalis resequence


text: HUVR

text: public

text: human

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: Homo sapiens

text: Homo sapiens

text: Blood

text: Sequences from 454 Junior


Streptomyces massiliensis AP10

text: URMITE

text: public

text: Streptomyces massiliensis AP10

text: Candidatus Streptomyces massiliensis AP10

text: Streptomyces massiliensis AP10


Virgibacillus senegalensis str. SK-1

text: URMITE

text: public

text: Virgibacillus senegalensis str. SK-1

text: Virgibacillus sp. SK-1

text: Virgibacillus sp. SK-1

text: Virgibacillus senegalensis


LFA

text: INSTITUT PASTEUR

text: public

text: LFA

tag: Namespace:INSTITUT PASTEUR

characteristic: collection date

text: 1 chromosome 2 plasmids

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

characteristic: environmental package

characteristic: geographic location (altitude)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: investigation type

text: Legionella fallonii LLAP-10

characteristic: project name

text: Legionella fallonii LLAP-10

characteristic: sequencing method

text: Complete genome of Legionella fallonii


LHA

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INSTITUT PASTEUR

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: LHA

characteristic: Submitter Id

text: 1 chromosome 1 plasmid

text: Legionella hackeliae

text: Legionella hackeliae

characteristic: strain

text: Legionella hackeliae complete genome