characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

text: MPI-EVA

text: public

text: Homo sapiens neanderthalensis

text: Homo sapiens neanderthalensis

text: El Sidron


status: PUBLIC

tag: attribute

characteristic: ENA-FIRST-PUBLIC

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MPI-EVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Homo sapiens neanderthalensis

characteristic: organism

text: Homo sapiens neanderthalensis

text: Vindija

characteristic: title


text: SRA-Webin

text: EMBL

text: public

text: baker's yeast

characteristic: common name

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

type: has member


text: EMBL-EBI

text: public

text: ArrayExpress

characteristic: broker name

text: Protocols: These are laboratory strains genetically engineered from strain SN148 which were not submitted to infection assays. Strains CIP,t1,t2 have 0, 1 and 2 copies of a Leu-tRNA(CAG) gene inserted at RPS10 locus, respectively. Strain t2ko1 is derived from strain t2 by deletion of one copy of the Ser-tRNA(CAG) gene. Strain t2ko2 is derived from t2ko1 by deletion of the second copy of the Ser-tRNA(CAG) gene. Samples were taken from the stock and plated onto YPD agar media containing fluconazole. One colony was selected for growth in liquid YPD until exponential phase. DNA extraction was carried out using the Genomic-tip 100/G kit (Qiagen) according to the manufacturer's protocol. Quantification and quality assessment were performed using the Picogreen fluorescence based quantification assay. Libraries were constructed using Illumina TruSeq DNA Sample Prep standard protocol. Briefly, 5 ug of high molecular weight genomic DNA (gDNA) was fragmented by Covaris sonication device. Following sonication, DNA fragments were end-repaired and A-tailed. Adapters were then ligated via a 3' thymine overhang. Finally, ligated fragments were amplified by PCR (10 cycles). insert sizes were about 400-500 bp as evaluated in an Agilent DNA 1000 Analyzer Chip.

characteristic: description

text: Candida albicans

text: Candida albicans

text: 80 percent leucin translation at CTG codon sites

characteristic: phenotype

text: Candida albicans

text: fresh sample

characteristic: specimen of known storage state

characteristic: strain


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMBL-EBI

text: public

text: ArrayExpress

text: Candida albicans

text: Candida albicans

text: 69 percent leucin translation at CTG codon sites

text: Candida albicans

text: fresh sample


characteristic: External Id

text: EMBL-EBI

text: public

text: ArrayExpress

text: Candida albicans

text: Candida albicans

text: 3 percent leucin translation at CTG codon sites

text: Candida albicans

text: fresh sample

text: CIP

text: CIP


text: EMBL-EBI

characteristic: INSDC center name

text: public

text: ArrayExpress

text: Candida albicans

text: Candida albicans

text: 22 percent leucin translation at CTG codon sites

text: Candida albicans

text: fresh sample


characteristic: ENA-CHECKLIST

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

text: HWU

characteristic: INSDC first public

text: public

text: eubacteria

text: marine samples

text: Bacteria

text: Bacteria

text: Deepwater Horizon


text: SRA-Webin

text: TFRC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: house mouse

text: Here, we compare the gut microbial populations at the early relative to the late stages of intervention using a high throughput sequencing-based analysis to understand the temporal relationship between the gut microbiota and obesity

text: Mus musculus

text: Mus musculus

text: Targeting the microbiota to address diet-induced obesity


text: SRA-Webin

text: MMRI

text: public

characteristic: Submitter Id

text: human

text: Donor 4 non-tumor brain,V2 capture design

text: Homo sapiens

characteristic: organism

text: Homo sapiens

characteristic: title


text: SRA-Webin

text: MMRI

text: public

text: human

characteristic: common name

text: Donor 5 non-tumor brain,V2 capture design

characteristic: description

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: MMRI

text: public

text: human

text: Donor 5 tumor,V2 capture design

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: MMRI

text: public

text: human

text: Donor 1 non-tumor brain,V2 capture design

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: MMRI

text: public

text: human

text: Donor 1 tumor, V2 capture design

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: MMRI

text: public

text: human

text: Donor 2 non-tumor brain,V2 capture design

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: MMRI

text: public

text: human

text: Donor 2 tumor, V2 capture design

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: MMRI

text: public

text: human

text: Donor 3 non-tumor brain,V2 capture design

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: MMRI

text: public

text: human

text: Donor 3 tumor,V2 capture design

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: MMRI

text: public

text: human

text: Donor 4 tumor, V2 capture design

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: EMBL

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: SRA-Webin

text: UNIPOTSDAM

text: public

text: UNIANDES

characteristic: broker name

text: thale cress

text: seedlings 15 DAS

characteristic: dev stage

characteristic: ecotype

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Arabidopsis thaliana FAIRESeq upon 3AT treatment


ARATHAFAIREOX-Control

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

text: UNIPOTSDAM

text: public

text: ARATHAFAIREOX-Control

text: UNIANDES

text: thale cress

text: seedlings 15 DAS

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Arabidopsis thaliana FAIRESeq control treatment


text: SRA-Webin

characteristic: External Id

text: UGENT

characteristic: INSDC center name

text: public

text: Cooperia oncophora

text: Cooperia oncophora

text: Co Adult ES proteome


atebel

characteristic: ENA-CHECKLIST

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

text: ILM

text: public

text: atebel

characteristic: anonymized name

text: white-bellied spider monkey

text: Ateles belzebuth

text: Ateles belzebuth


avalan

text: SRA-Webin

text: ILM

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: avalan

text: woolly lemur

text: Avahi laniger

text: Avahi laniger


caccal

text: SRA-Webin

text: ILM

text: public

characteristic: SRA accession

text: caccal

characteristic: Submitter Id

text: Bald Uacari

text: Cacajao calvus

characteristic: organism

text: Cacajao calvus


caccup

text: SRA-Webin

text: ILM

text: public

text: caccup

text: coppery titi

characteristic: common name

text: Callicebus cupreus

text: Callicebus cupreus

characteristic: title


calgeo

text: SRA-Webin

text: ILM

text: public

text: calgeo

text: Geoffroy's marmoset

text: Callithrix geoffroyi

text: Callithrix geoffroyi


cebpyg

text: SRA-Webin

text: ILM

text: public

text: cebpyg

text: pygmy marmoset

text: Callithrix pygmaea

text: Callithrix pygmaea


ceralb

text: SRA-Webin

text: ILM

text: public

text: ceralb

text: Sykes' monkey

text: Cercopithecus albogularis

text: Cercopithecus albogularis


cerchr

text: SRA-Webin

text: ILM

text: public

text: cerchr

text: Golden-bellied mangabey

text: Cercocebus chrysogaster

text: Cercocebus chrysogaster


chemed

text: SRA-Webin

text: ILM

text: public

text: chemed

text: Lesser dwarf lemur

text: Cheirogaleus medius

text: Cheirogaleus medius


erypat

text: SRA-Webin

text: ILM

text: public

text: erypat

text: red guenon

text: Erythrocebus patas

text: Erythrocebus patas


eulruf

text: SRA-Webin

text: ILM

text: public

text: eulruf

text: Red-fronted lemur

text: Eulemur rufus

text: Eulemur rufus


galmoh

text: SRA-Webin

text: ILM

text: public

text: galmoh

text: Moholi bushbaby

text: Galago moholi

text: Galago moholi


hapgri

text: SRA-Webin

text: ILM

text: public

text: hapgri

text: Hgg

text: bamboo lemur

text: Hapalemur griseus

text: Hapalemur griseus

text: Hgg


laglag

text: SRA-Webin

text: ILM

text: public

text: laglag

text: brown woolly monkey

text: Lagothrix lagotricha

text: Lagothrix lagotricha


leoros

text: SRA-Webin

text: ILM

text: public

text: leoros

text: golden lion tamarin

text: Leontopithecus rosalia

text: Leontopithecus rosalia


lepruf

text: SRA-Webin

text: ILM

text: public

text: lepruf

text: red-tailed sportive lemur

text: Lepilemur ruficaudatus

text: Lepilemur ruficaudatus


lorlyd

text: SRA-Webin

text: ILM

text: public

text: lorlyd

text: gray slender loris

text: Loris lydekkerianus

text: Loris lydekkerianus


mansph

text: SRA-Webin

text: ILM

text: public

text: mansph

text: mandrill

text: Mandrillus sphinx

text: Mandrillus sphinx


nomleu

text: SRA-Webin

text: ILM

text: public

text: nomleu

text: northern white-cheeked gibbon

text: Nomascus leucogenys

text: Nomascus leucogenys


text: public

tag: Namespace:MRC National Institute for Medical Research

text: ArrayExpress

characteristic: broker name

text: Protocols: Mycobacterium tuberculosis H37Rv (SysteMTb) was grown in Middlebrook 7H9 medium supplemented with 0.4% glycerol, 0.085% NaCl, 0.5% BSA and 0.05% Tyloxapol in roller bottle culture (2 rpm at 37?C). For starvation experiments, exponentially growing bacteria were washed, resuspended in PBS supplemented with 0.025% Tyloxapol, and maintained in roller bottle culture for a further 24 hours RNA was isolated from triplicate exponentially growing and PBS-washed cultures using the FastRNA Pro blue kit from QBiogene/MP Bio according to manufactures instructions. All RNA samples were treated with Turbo DNase free (Ambion). For the synthesis of whole transcriptome cDNA, RNA was fragmented with ultrasound (4 pulses of 30 s at 4oC), then treated with Antarctic phosphatase and re-phosphorylated with polynucleotide kinase (PNK). Fragmented RNA was then poly(A)-tailed using poly(A) polymerase and a RNA adapter was ligated to the 5'-phosphate of the RNA. First-strand cDNA synthesis was performed using an oligo(dT)-adapter primer and M-MLV reverse transcriptase. The resulting cDNA was PCR-amplified to about 20-30 ng/?l using a high fidelity DNA polymerase. For TSS mapping, RNA was enriched for primary transcripts by incubating fragmented, PNK-treated samples with Terminator exonuclease (TEX, Epicentre) which specifically degrades RNA species carrying a 5' monophosphate (5'P). Exonuclease-resistant RNA species (primary transcripts with 5'PPP) were poly(A)-tailed using poly(A) polymerase, followed by treatment with tobacco acid pyrophosphatase (TAP, Epicentre) to degrade 5'PPP to 5'P RNA

characteristic: description

text: Starved cultures

characteristic: growth condition

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

characteristic: strain

text: 24 hour

characteristic: time


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MRC National Institute for Medical Research

characteristic: INSDC center name

text: public

text: ArrayExpress

text: Starved cultures

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: 24 hour


characteristic: INSDC first public

text: public

text: ArrayExpress

text: Exponential cultures

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis


papanu

characteristic: ENA-CHECKLIST

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

text: ILM

characteristic: INSDC last update

text: public

text: papanu

characteristic: anonymized name

text: olive baboon

text: Papio anubis

text: Papio anubis


sagoed

text: SRA-Webin

text: ILM

text: public

characteristic: INSDC status

characteristic: SRA accession

text: sagoed

characteristic: Submitter Id

text: cotton-top tamarin

text: Saguinus oedipus

characteristic: organism

text: Saguinus oedipus


saibol

text: SRA-Webin

text: ILM

text: public

text: saibol

text: Bolivian squirrel monkey

characteristic: common name

text: Saimiri boliviensis

text: Saimiri boliviensis

characteristic: title


symsyn

text: SRA-Webin

text: ILM

text: public

text: symsyn

text: siamang

text: Symphalangus syndactylus

text: Symphalangus syndactylus


alocar

text: SRA-Webin

text: ILM

text: public

text: alocar

text: black howler monkey

text: Alouatta caraya

text: Alouatta caraya


aotaza

text: SRA-Webin

text: ILM

text: public

text: aotaza

text: Azara's night monkey

text: Aotus azarai

text: Aotus azarai


text: SRA-Webin

text: EBI-UI

text: public

text: Maize rhizosphere repeat 1, June 01,2011

characteristic: description

text: root metagenome

text: root metagenome

text: maize rhizosphere microboes


text: SRA-Webin

text: EBI-UI

text: public

text: Maize rhizosphere repeat 2, June 01,2011

text: root metagenome

text: root metagenome

text: maize rhizosphere microboes


text: SRA-Webin

text: EBI-UI

text: public

text: Maize rhizosphere repeat 3, June 01,2011

text: root metagenome

text: root metagenome

text: maize rhizosphere microboes


text: SRA-Webin

text: EBI-UI

text: public

text: Maize rhizosphere repeat 4, June 01,2011

text: root metagenome

text: root metagenome

text: maize rhizosphere microboes


text: SRA-Webin

text: EBI-UI

text: public

text: Maize bulk soil repeat 1, June 01,2011

text: root metagenome

text: root metagenome

text: maize rhizosphere microboes


text: SRA-Webin

text: EBI-UI

text: public

text: Maize bulk soil repeat 2, June 01,2011

text: root metagenome

text: root metagenome

text: maize rhizosphere microboes


text: SRA-Webin

text: EBI-UI

text: public

text: Maize bulk soil repeat 3, June 01,2011

text: root metagenome

text: root metagenome

text: maize rhizosphere microboes


text: SRA-Webin

text: EBI-UI

text: public

text: Maize bulk soil repeat 4, June 01,2011

text: root metagenome

text: root metagenome

text: maize rhizosphere microboes


text: SRA-Webin

text: EBI-UI

text: public

text: Maize rhizosphere repeat 1, June 21,2011

text: root metagenome

text: root metagenome

text: maize rhizosphere microboes


text: SRA-Webin

text: EBI-UI

text: public

text: Maize rhizosphere repeat 2, June 21,2011

text: root metagenome

text: root metagenome

text: maize rhizosphere microboes


text: SRA-Webin

text: EBI-UI

text: public

text: Maize rhizosphere repeat 3, June 21,2011

text: root metagenome

text: root metagenome

text: maize rhizosphere microboes


text: SRA-Webin

text: EBI-UI

text: public

text: Maize rhizosphere repeat 4, June 21,2011

text: root metagenome

text: root metagenome

text: maize rhizosphere microboes


text: SRA-Webin

text: EBI-UI

text: public

text: Maize bulk soil repeat 1, June 21,2011

text: root metagenome

text: root metagenome

text: maize rhizosphere microboes


text: SRA-Webin

text: EBI-UI

text: public

text: Maize bulk soil repeat 2, June 21,2011

text: root metagenome

text: root metagenome

text: maize rhizosphere microboes


text: SRA-Webin

text: EBI-UI

text: public

text: Maize bulk soil repeat 3, June 21,2011

text: root metagenome

text: root metagenome

text: maize rhizosphere microboes


text: SRA-Webin

text: EBI-UI

text: public

text: Maize bulk soil repeat 4, June 21,2011

text: root metagenome

text: root metagenome

text: maize rhizosphere microboes


text: SRA-Webin

text: EBI-UI

text: public

text: Maize rhizosphere repeat 1, July 18,2011

text: root metagenome

text: root metagenome

text: maize rhizosphere microboes


text: SRA-Webin

text: EBI-UI

text: public

text: Maize rhizosphere repeat 2, July 18,2011

text: root metagenome

text: root metagenome

text: maize rhizosphere microboes


text: SRA-Webin

text: EBI-UI

text: public

text: Maize rhizosphere repeat 3, July 18,2011

text: root metagenome

text: root metagenome

text: maize rhizosphere microboes


text: SRA-Webin

text: EBI-UI

text: public

text: Maize rhizosphere repeat 4, July 18,2011

text: root metagenome

text: root metagenome

text: maize rhizosphere microboes


text: SRA-Webin

text: EBI-UI

text: public

text: Maize bulk soil repeat 1, July 18,2011

text: root metagenome

text: root metagenome

text: maize rhizosphere microboes


text: SRA-Webin

text: EBI-UI

text: public

text: Maize bulk soil repeat 2, July 18,2011

text: root metagenome

text: root metagenome

text: maize rhizosphere microboes


text: SRA-Webin

text: EBI-UI

text: public

text: Maize bulk soil repeat 3, July 18,2011

text: root metagenome

text: root metagenome

text: maize rhizosphere microboes


text: SRA-Webin

text: EBI-UI

text: public

text: Maize bulk soil repeat 4, July 18,2011

text: root metagenome

text: root metagenome

text: maize rhizosphere microboes


text: SRA-Webin

text: EBI-UI

text: public

text: Maize rhizosphere repeat 1, August 11,2011

text: root metagenome

text: root metagenome

text: maize rhizosphere microboes


text: SRA-Webin

text: EBI-UI

text: public

text: Maize rhizosphere repeat 2, August 11,2011

text: root metagenome

text: root metagenome

text: maize rhizosphere microboes


text: SRA-Webin

text: EBI-UI

text: public

text: Maize rhizosphere repeat 3, August 11,2011

text: root metagenome

text: root metagenome

text: maize rhizosphere microboes


text: SRA-Webin

text: EBI-UI

text: public

text: Maize rhizosphere repeat 4, August 11,2011

text: root metagenome

text: root metagenome

text: maize rhizosphere microboes


text: SRA-Webin

text: EBI-UI

text: public

text: Maize bulk soil repeat 1, August 11,2011

text: root metagenome

text: root metagenome

text: maize rhizosphere microboes


text: SRA-Webin

text: EBI-UI

text: public

text: Maize bulk soil repeat 2, August 11,2011

text: root metagenome

text: root metagenome

text: maize rhizosphere microboes


text: SRA-Webin

text: EBI-UI

text: public

text: Maize bulk soil repeat 3, August 11,2011

text: root metagenome

text: root metagenome

text: maize rhizosphere microboes


text: SRA-Webin

text: EBI-UI

text: public

text: Maize bulk soil repeat 4, August 11,2011

text: root metagenome

text: root metagenome

text: maize rhizosphere microboes


text: SRA-Webin

text: TUG

text: public

text: Martin J. Blaser

characteristic: collected by

text: USA

characteristic: geographic location (country and/or sea)

text: Human blood, renal transplant

characteristic: host

text: Campylobacter fetus subsp. fetus 82-40

text: Campylobacter fetus subsp. fetus 82-40

text: A

characteristic: serotype

characteristic: strain

text: fetus

characteristic: sub species

text: Cff 82-40 RNA untreated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: External Id

text: TUG

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Martin J. Blaser

text: USA

text: Human blood, renal transplant

text: Campylobacter fetus subsp. fetus 82-40

text: Campylobacter fetus subsp. fetus 82-40

text: A

text: fetus

text: Cff 82-40 RNA treated with TEX


text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

text: TUG

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Martin J. Blaser

text: USA

text: Bovine, genital secretion

text: Campylobacter fetus subsp. venerealis str. 84-112

text: A

text: venerealis

text: Cfv 84-112 RNA untreated


text: SRA-Webin

text: TUG

text: public

text: Martin J. Blaser

characteristic: collected by

text: USA

text: Bovine, genital secretion

characteristic: organism

text: A

text: venerealis

text: Cfv 84-112 RNA treated with TEX

characteristic: title


text: SRA-Webin

text: CNC

text: public

text: uncultured archaeon

text: uncultured archaeon

text: Bottled water. Fifteen days of storage. Year 2009.


text: EBI

text: public

characteristic: anonymized name

text: Urumia

text: Marakan

text: wild goat

characteristic: common name

text: Bezoar IRCA-C3-1001 from NextGen project

characteristic: description

text: 60 months

characteristic: estimated age

text: Iran

characteristic: geographic location (country and/or sea)

text: 38.625477 degrees

characteristic: latitude

text: 45.162543 degrees

characteristic: longitude

text: Capra aegagrus

characteristic: sampling date

text: Capra aegagrus

text: male

characteristic: sex

text: Capra aegagrus


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: kalibar

text: Arasbaran

text: wild goat

text: Bezoar IRCA-F2-5026 from NextGen project

text: 120 months

text: Iran

text: 39.158 degrees

text: 46.694 degrees

text: Capra aegagrus

text: Capra aegagrus

text: male

text: Capra aegagrus


text: EBI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: kalibar

text: Arasbaran

text: wild goat

text: Bezoar IRCA-F2-5064 from NextGen project

text: Iran

text: 39.246 degrees

text: 46.843 degrees

text: Capra aegagrus

text: Capra aegagrus

text: male

text: Capra aegagrus


text: EBI

text: public

characteristic: anonymized name

text: kalibar

text: Arasbaran

text: wild goat

characteristic: common name

text: Bezoar IRCA-F2-5066 from NextGen project

text: Iran

text: 39.077379 degrees

text: 46.931243 degrees

text: Capra aegagrus

characteristic: organism

text: Capra aegagrus

text: male

text: Capra aegagrus

characteristic: title


text: EBI

text: public

text: kalibar

text: arasbaran

text: wild goat

text: Bezoar IRCA-F3-0597 from NextGen project

characteristic: description

text: Iran

characteristic: geographic location (country and/or sea)

text: 38.882 degrees

characteristic: latitude

text: 46.657 degrees

text: Capra aegagrus

text: Capra aegagrus

text: male

text: Capra aegagrus


text: EBI

text: public

text: kalibar

text: arasbaran

text: wild goat

text: Bezoar IRCA-F3-0600 from NextGen project

text: Iran

text: 38.92 degrees

text: 46.87 degrees

characteristic: longitude

text: Capra aegagrus

characteristic: sampling date

text: Capra aegagrus

text: male

characteristic: sex

text: Capra aegagrus


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

text: public

text: kalibar

text: arasbaran

text: wild goat

text: Bezoar IRCA-G2-0568 from NextGen project

text: Iran

text: 39.35 degrees

text: 47.47 degrees

text: Capra aegagrus

text: Capra aegagrus

text: male

text: Capra aegagrus


text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: kalibar

text: arasbaran

text: wild goat

text: Bezoar IRCA-G2-0598 from NextGen project

text: Iran

text: 39.12 degrees

text: 47.12 degrees

text: Capra aegagrus

text: Capra aegagrus

text: male

text: Capra aegagrus


text: EBI

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: kalibar

text: Arasbaran

text: wild goat

text: Bezoar IRCA-G2-5063 from NextGen project

text: Iran

text: 39.176 degrees

text: 47.125 degrees

text: Capra aegagrus

text: Capra aegagrus

text: male

text: Capra aegagrus


text: EBI

text: public

characteristic: anonymized name

text: Kangavar

text: Khan Gormaz

text: wild goat

characteristic: common name

text: Bezoar IRCA-I11-0001 from NextGen project

text: Iran

text: 34.598 degrees

text: 48.201 degrees

text: Capra aegagrus

characteristic: organism

text: Capra aegagrus

text: male

text: Capra aegagrus


text: EBI

text: public

text: Kangavar

text: Khan Gormaz

text: wild goat

text: Bezoar IRCA-I11-0002 from NextGen project

characteristic: description

text: Iran

characteristic: geographic location (country and/or sea)

text: 34.595 degrees

text: 48.208 degrees

text: Capra aegagrus

text: Capra aegagrus

text: male

text: Capra aegagrus

characteristic: title


text: EBI

text: public

text: Kangavar

text: Khan Gormaz

text: wild goat

text: Bezoar IRCA-I11-0003 from NextGen project

text: Iran

text: 34.6 degrees

characteristic: latitude

text: 48.208 degrees

characteristic: longitude

text: Capra aegagrus

characteristic: sampling date

text: Capra aegagrus

text: male

text: Capra aegagrus


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EBI

text: public

text: ardebil

text: karnagh

text: wild goat

text: Bezoar IRCA-I6-5237 from NextGen project

text: Iran

text: 37.16 degrees

text: 48.39 degrees

text: Capra aegagrus

text: Capra aegagrus

text: male

characteristic: sex

text: Capra aegagrus


characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Malayer

text: Lashgar Dar

text: wild goat

text: Bezoar IRCA-K12-0005 from NextGen project

text: Iran

text: 34.209 degrees

text: 49.048 degrees

text: Capra aegagrus

text: Capra aegagrus

text: male

text: Capra aegagrus


text: EBI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Manjil

text: Tarom sofla

text: wild goat

text: Bezoar IRCA-K7-0009 from NextGen project

text: Iran

text: 36.679409 degrees

text: 49.368903 degrees

text: Capra aegagrus

text: Capra aegagrus

text: male

text: Capra aegagrus


text: EBI

text: public

characteristic: Submitter Id

characteristic: anonymized name

text: arak

text: khomein

text: wild goat

characteristic: common name

text: Bezoar IRCA-M12-0008 from NextGen project

text: Iran

text: 34.178 degrees

text: 50.344 degrees

text: Capra aegagrus

text: Capra aegagrus

text: male

text: Capra aegagrus


characteristic: ENA-CHECKLIST

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

text: UIO

text: public

text: University of Oslo, Programme for Marine Biology

characteristic: culture collection

text: cDNA synthesised from RNA extracted from a haptophyte mock community consisting of 1 million cells from 11 species, amplified with primer pair Hap454

characteristic: description

text: Haptophyceae

characteristic: organism

text: Haptophyceae

text: Haptophyte mock community


characteristic: ENA-FIRST-PUBLIC

text: SRA-Webin

text: UIO

text: public

text: DNA extracted from a haptophyte mock community consisting of 1 million cells from 11 species, amplified with primer pair Prym454

text: Haptophyceae

text: Haptophyceae

text: Haptophyte mock community

characteristic: title


characteristic: ENA-LAST-UPDATE

text: SRA-Webin

text: UIO

text: public

text: DNA extracted from a sample consisting of equal amounts of DNA extracted separately from each of 11 species of haptophytes, amplified with primer pair Prym454

text: Haptophyceae

text: Haptophyceae

text: Haptophyte mock community


text: SRA-Webin

characteristic: External Id

text: ROSLIN

text: public

text: chicken

text: chick embryonic stem cell (cESC) lin

text: Gallus gallus

text: Gallus gallus

text: chick embryonic stem cell (cESC) lin


StimB

text: SRA-Webin

text: ROSLIN

characteristic: INSDC center name

text: public

text: StimB

text: chicken

text: CD40L-induced B-cell line

text: Gallus gallus

text: Gallus gallus

text: CD40L-induced B-cell line


text: SRA-Webin

text: ROSLIN

characteristic: INSDC first public

text: public

text: chicken

text: avian-leukosis virus (ALV) transformed B-cell line

text: Gallus gallus

text: Gallus gallus


text: SRA-Webin

text: ROSLIN

characteristic: INSDC last update

text: public

text: chicken

text: chicken macrophage cell line

text: Gallus gallus

text: Gallus gallus

text: chicken macrophage cell line


text: SRA-Webin

text: ROSLIN

text: public

characteristic: INSDC status

text: turkey

text: turkey macrophage cell line

text: Meleagris gallopavo

text: Meleagris gallopavo

text: turkey macrophage cell line


text: EBI

text: public

characteristic: SRA accession

text: moalem kalaye Qazvin

text: Alamout

text: wild goat

text: Bezoar IRCA-M7-0652 from NextGen project

text: Iran

characteristic: geographic location (country and/or sea)

text: 36.650299 degrees

characteristic: latitude

text: 50.265433 degrees

characteristic: longitude

text: Capra aegagrus

characteristic: sampling date

text: Capra aegagrus

text: female

characteristic: sex

text: Capra aegagrus


text: EBI

text: public

characteristic: Submitter Id

characteristic: anonymized name

text: urumie

text: urumie

text: goat

characteristic: common name

text: Goat IRCH-B5-5032 from NextGen project

text: Iran

text: 37.972346 degrees

text: 44.95314 degrees

text: Capra hircus

text: Capra hircus

text: male

text: Capra hircus


characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Ghare ziadin

text: Ghare ziadin

text: goat

text: Goat IRCH-C3-5039 from NextGen project

characteristic: description

text: 48 months

characteristic: estimated age

text: Iran

text: 38.859108 degrees

text: 45.060779 degrees

text: Capra hircus

characteristic: organism

text: Capra hircus

text: female

text: Capra hircus


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

text: public

text: nushin shahr

text: nushin shahr

text: goat

text: Goat IRCH-C5-5206 from NextGen project

text: 12 months

text: Iran

text: 37.781355 degrees

text: 45.063829 degrees

text: Capra hircus

text: Capra hircus

text: male

text: Capra hircus

characteristic: title


text: EBI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: oshnavie

text: oshnavie

text: goat

text: Goat IRCH-C6-5204 from NextGen project

text: 60 months

text: Iran

text: 37.179836 degrees

text: 45.206041 degrees

text: Capra hircus

text: Capra hircus

text: female

text: Capra hircus


text: EBI

text: public

text: naghade

text: naghade

text: goat

text: Goat IRCH-C7-5144 from NextGen project

text: 12 months

text: Iran

characteristic: geographic location (country and/or sea)

text: 36.728585 degrees

characteristic: latitude

text: 45.243583 degrees

characteristic: longitude

text: Capra hircus

characteristic: sampling date

text: Capra hircus

text: male

text: Capra hircus


text: EBI

text: public

characteristic: Submitter Id

characteristic: anonymized name

text: jazire eslami

text: jazire eslami

text: goat

characteristic: common name

text: Goat IRCH-D5-5240 from NextGen project

text: 36 months

text: Iran

text: 37.805513 degrees

text: 45.568577 degrees

text: Capra hircus

text: Capra hircus

text: female

characteristic: sex

text: Capra hircus


characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: ajabshir

text: ajabshir

text: goat

text: Goat IRCH-D6-5189 from NextGen project

characteristic: description

text: 36 months

characteristic: estimated age

text: Iran

text: 37.469292 degrees

text: 45.877966 degrees

text: Capra hircus

characteristic: organism

text: Capra hircus

text: female

text: Capra hircus


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

text: public

text: naghade

text: naghade

text: goat

text: Goat IRCH-D7-5132 from NextGen project

text: 12 months

text: Iran

text: 36.9843 degrees

text: 45.590572 degrees

text: Capra hircus

text: Capra hircus

text: male

text: Capra hircus

characteristic: title


text: EBI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: asko

text: asko

text: goat

text: Goat IRCH-E5-5053 from NextGen project

text: 18 months

text: Iran

text: 37.924979 degrees

text: 46.088053 degrees

text: Capra hircus

text: Capra hircus

text: female

text: Capra hircus


text: EBI

text: public

text: malakan

text: malkan

text: goat

text: Goat IRCH-E6-5087 from NextGen project

text: 24 months

text: Iran

characteristic: geographic location (country and/or sea)

text: 37.216347 degrees

characteristic: latitude

text: 46.079006 degrees

characteristic: longitude

text: Capra hircus

characteristic: sampling date

text: Capra hircus

text: female

text: Capra hircus


text: EBI

text: public

characteristic: Submitter Id

characteristic: anonymized name

text: Miandoab

text: miandoab

text: goat

characteristic: common name

text: Goat IRCH-E7-5193 from NextGen project

text: 24 months

text: Iran

text: 36.952485 degrees

text: 46.252344 degrees

text: Capra hircus

text: Capra hircus

text: male

characteristic: sex

text: Capra hircus


characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Kamyaran

text: Kamyaran

text: goat

text: Goat IRCH-F11-5140 from NextGen project

characteristic: description

text: 24 months

characteristic: estimated age

text: Iran

text: 34.902456 degrees

text: 46.906129 degrees

text: Capra hircus

characteristic: organism

text: Capra hircus

text: female

text: Capra hircus


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

text: public

text: ahar

text: ahar

text: goat

text: Goat IRCH-F3-5044 from NextGen project

text: 24 months

text: Iran

text: 38.522945 degrees

text: 46.852959 degrees

text: Capra hircus

text: Capra hircus

text: female

text: Capra hircus

characteristic: title


text: EBI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Vazarghan

text: Vazarghan

text: goat

text: Goat IRCH-F4-5093 from NextGen project

text: 12 months

text: Iran

text: 38.300428 degrees

text: 46.612244 degrees

text: Capra hircus

text: Capra hircus

text: female

text: Capra hircus


text: EBI

text: public

text: Bostan abad

text: Bostan abad

text: goat

text: Goat IRCH-F5-5133 from NextGen project

text: 36 months

text: Iran

characteristic: geographic location (country and/or sea)

text: 37.912958 degrees

characteristic: latitude

text: 46.615062 degrees

characteristic: longitude

text: Capra hircus

characteristic: sampling date

text: Capra hircus

text: female

text: Capra hircus


text: EBI

text: public

characteristic: Submitter Id

characteristic: anonymized name

text: ahar

text: ahar

text: goat

characteristic: common name

text: Goat IRCH-G3-5210 from NextGen project

text: 12 months

text: Iran

text: 38.5349 degrees

text: 47.164507 degrees

text: Capra hircus

text: Capra hircus

text: male

characteristic: sex

text: Capra hircus


characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Arbab kandi

text: Meshkin shahr

text: goat

text: Goat IRCH-G4-5194 from NextGen project

characteristic: description

text: 72 months

characteristic: estimated age

text: Iran

text: 38.394106 degrees

text: 47.429935 degrees

text: Capra hircus

characteristic: organism

text: Capra hircus

text: female

text: Capra hircus


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

text: public

text: Sarab

text: Sarab

text: goat

text: Goat IRCH-G5-5185 from NextGen project

text: 12 months

text: Iran

text: 37.973596 degrees

text: 47.079281 degrees

text: Capra hircus

text: Capra hircus

text: male

text: Capra hircus

characteristic: title


text: EBI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: naghade

text: naghade

text: sheep

text: Sheep IROA-D7-5033 from NextGen project

text: Iran

text: 36.985121 degrees

text: 45.590704 degrees

text: Ovis aries

text: Ovis aries

text: female

text: Ovis aries


text: EBI

text: public

text: Nkiga

characteristic: breed

text: EBI

characteristic: broker name

text: KABALE

text: KAMWEZI

text: Cattle UGBT-C10-0219 from NextGen project

text: 48 months

text: Uganda

characteristic: geographic location (country and/or sea)

text: -1.20433 degrees

characteristic: latitude

text: 30.25736 degrees

characteristic: longitude

text: Bos taurus x Bos indicus

characteristic: sampling date

text: Bos taurus x Bos indicus

text: female

text: Bos taurus x Bos indicus


characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

characteristic: Submitter Id

characteristic: anonymized name

text: East African Shorthorn Zebu

text: EBI

text: NTOROKO

text: KARUGUTU

text: Cattle UGBT-C6-0729 from NextGen project

characteristic: description

text: 24 months

text: Uganda

text: 0.86187 degrees

text: 30.23459 degrees

text: Bos taurus x Bos indicus

text: Bos taurus x Bos indicus

text: female

characteristic: sex

text: Bos taurus x Bos indicus


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: IOA

characteristic: INSDC center name

text: public

text: salmon louse

characteristic: common name

text: Lepeophtheirus salmonis

characteristic: organism

text: Lepeophtheirus salmonis

text: Drug susceptible

characteristic: strain

text: Whole organism

characteristic: tissue type


text: SRA-Webin

text: CAM

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Butterfly Genetics Group 8862

characteristic: bio material

text: imago

characteristic: dev stage

text: Panama, Darien, Cana

characteristic: geographic location (country and/or sea)

text: 7.7568 N 77.6841 W

characteristic: lat lon

text: Heliconius sara

text: Heliconius sara

text: Heliconius sara longwing butterfly.

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

text: CAM

text: public

characteristic: Submitter Id

text: Butterfly Genetics Group 260

text: imago

text: Colombia, Tolima, Mariquita Reserve

text: 5.2120 N 74.8970 W

text: Heliconius sapho

text: Heliconius sapho

text: Heliconius sapho longwing butterfly.


characteristic: External Id

text: EBI

characteristic: INSDC center name

text: public

characteristic: anonymized name

text: Ankole

characteristic: breed

text: EBI

characteristic: broker name

text: HOIMA

text: KITOBA

text: Cattle UGBT-D6-0701 from NextGen project

characteristic: description

text: 36 months

characteristic: estimated age

text: Uganda

text: 0.97391 degrees

characteristic: latitude

text: 31.30129 degrees

characteristic: longitude

text: Bos taurus x Bos indicus

characteristic: sampling date

text: Bos taurus x Bos indicus

text: male

characteristic: sex

text: Bos taurus x Bos indicus


text: EBI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Ankole

text: EBI

text: KABERAMAIDO

text: KOBULUBULU

text: Cattle UGBT-G5-0617 from NextGen project

text: 84 months

text: Uganda

characteristic: geographic location (country and/or sea)

text: 1.69651 degrees

text: 33.08713 degrees

text: Bos taurus x Bos indicus

characteristic: organism

text: Bos taurus x Bos indicus

text: female

text: Bos taurus x Bos indicus


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

text: public

characteristic: Submitter Id

text: Shorthorn Zebu

text: EBI

text: KOTIDO

text: PANYANGARA

text: Cattle UGBT-I3-0477 from NextGen project

text: 60 months

text: Uganda

text: 2.99759 degrees

text: 33.94573 degrees

text: Bos taurus x Bos indicus

text: Bos taurus x Bos indicus

text: female

text: Bos taurus x Bos indicus

characteristic: title


text: EBI

characteristic: INSDC center name

text: public

characteristic: anonymized name

text: East African Shorthorn Zebu

characteristic: breed

text: EBI

characteristic: broker name

text: NAKAPIRIPIRITI

text: NYATIRAE

text: Cattle UGBT-J5-0922 from NextGen project

characteristic: description

text: 84 months

text: Uganda

text: 1.93608 degrees

text: 34.59608 degrees

text: Bos taurus x Bos indicus

text: Bos taurus x Bos indicus

text: female

text: Bos taurus x Bos indicus


text: EBI

text: public

text: Ankole

text: EBI

text: RUKUNGIRI

text: NYARUSHANZE

text: Cattle UGBT-B9-0244 from NextGen project

text: 96 months

characteristic: estimated age

text: Uganda

text: -0.91676 degrees

characteristic: latitude

text: 30.00819 degrees

characteristic: longitude

text: Bos taurus x Bos indicus

characteristic: sampling date

text: Bos taurus x Bos indicus

text: female

characteristic: sex

text: Bos taurus x Bos indicus


text: EBI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: East African Shorthorn Zebu

text: EBI

text: TORORO

text: OSUKURU

text: Cattle UGBT-I7-0014 from NextGen project

text: 144 months

text: Uganda

characteristic: geographic location (country and/or sea)

text: 0.7337 degrees

text: 34.20359 degrees

text: Bos taurus x Bos indicus

text: Bos taurus x Bos indicus

text: female

text: Bos taurus x Bos indicus


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

text: public

characteristic: Submitter Id

text: Shorthorn Zebu

text: EBI

text: MUBENDE

text: KIDONGO

text: Cattle UGBT-E6-0741 from NextGen project

text: 48 months

text: Uganda

text: 1.04473 degrees

text: 31.54386 degrees

text: Bos taurus x Bos indicus

characteristic: organism

text: Bos taurus x Bos indicus

text: female

text: Bos taurus x Bos indicus


text: EBI

characteristic: INSDC center name

text: public

characteristic: anonymized name

text: Shorthorn Zebu

characteristic: breed

text: EBI

characteristic: broker name

text: KITGUM

text: OROM

text: Cattle UGBT-H2-0430 from NextGen project

text: 60 months

text: Uganda

text: 3.39326 degrees

text: 33.47214 degrees

text: Bos taurus x Bos indicus

text: Bos taurus x Bos indicus

text: female

text: Bos taurus x Bos indicus

characteristic: title


text: EBI

text: public

text: Ankole

text: EBI

text: ISINGIRO

text: MBAARE

text: Cattle UGBT-D9-0292 from NextGen project

characteristic: description

text: 96 months

characteristic: estimated age

text: Uganda

text: -0.94345 degrees

characteristic: latitude

text: 31.07953 degrees

characteristic: longitude

text: Bos taurus x Bos indicus

characteristic: sampling date

text: Bos taurus x Bos indicus

text: female

text: Bos taurus x Bos indicus


text: EBI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Ankole

text: EBI

text: MASINDI

text: NYANGAHYA

text: Cattle UGBT-E5-0677 from NextGen project

text: 12 months

text: Uganda

text: 1.66295 degrees

text: 31.79751 degrees

text: Bos taurus x Bos indicus

text: Bos taurus x Bos indicus

text: male

characteristic: sex

text: Bos taurus x Bos indicus


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

text: public

characteristic: Submitter Id

text: East African Shorthorn Zebu

text: EBI

text: Apac

text: Aduku

text: Cattle UGBT-G4-0568 from NextGen project

text: 84 months

text: Uganda

characteristic: geographic location (country and/or sea)

text: 2.00925 degrees

text: 32.71893 degrees

text: Bos taurus x Bos indicus

text: Bos taurus x Bos indicus

text: female

text: Bos taurus x Bos indicus


text: EBI

characteristic: INSDC center name

text: public

characteristic: anonymized name

text: Small East African Zebu

characteristic: breed

text: EBI

characteristic: broker name

text: NAKASONGOLA

text: BAMUGOLODE

text: Cattle UGBT-G6-0552 from NextGen project

text: 72 months

text: Uganda

text: 1.10034 degrees

text: 32.77155 degrees

text: Bos taurus x Bos indicus

characteristic: organism

text: Bos taurus x Bos indicus

text: female

text: Bos taurus x Bos indicus


text: EBI

text: public

text: Ankole

text: EBI

text: MUBENDE

text: MIANZI

text: Cattle UGBT-D7-0761 from NextGen project

characteristic: description

text: 96 months

characteristic: estimated age

text: Uganda

text: 0.5978 degrees

characteristic: latitude

text: 31.03319 degrees

characteristic: longitude

text: Bos taurus x Bos indicus

text: Bos taurus x Bos indicus

text: female

text: Bos taurus x Bos indicus

characteristic: title


text: EBI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Shorthorn Zebu

text: EBI

text: ADJUMANI

text: BIBIA

text: Cattle UGBT-F2-0321 from NextGen project

text: 96 months

text: Uganda

text: 3.47374 degrees

text: 32.15096 degrees

text: Bos taurus x Bos indicus

characteristic: sampling date

text: Bos taurus x Bos indicus

text: female

text: Bos taurus x Bos indicus


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

text: public

characteristic: Submitter Id

text: Ankole

text: EBI

text: GULU

text: KORO

text: Cattle UGBT-F3-0523 from NextGen project

text: 72 months

text: Uganda

text: 2.69807 degrees

text: 32.41719 degrees

text: Bos taurus x Bos indicus

text: Bos taurus x Bos indicus

text: female

characteristic: sex

text: Bos taurus x Bos indicus


text: EBI

characteristic: INSDC center name

text: public

characteristic: anonymized name

text: Ankole

characteristic: breed

text: EBI

characteristic: broker name

text: NAJJEMBE

text: NAJJEMBE

text: Cattle UGBT-G7-0034 from NextGen project

text: 36 months

text: Uganda

characteristic: geographic location (country and/or sea)

text: 0.19149 degrees

text: 32.97924 degrees

text: Bos taurus x Bos indicus

text: Bos taurus x Bos indicus

text: female

text: Bos taurus x Bos indicus


text: EBI

text: public

text: Shorthorn Zebu

text: EBI

text: KABERAMAIDO

text: BULULU

text: Cattle UGBT-H5-0632 from NextGen project

characteristic: description

text: 96 months

characteristic: estimated age

text: Uganda

text: 1.71953 degrees

characteristic: latitude

text: 33.27573 degrees

characteristic: longitude

text: Bos taurus x Bos indicus

characteristic: organism

text: Bos taurus x Bos indicus

text: female

text: Bos taurus x Bos indicus


text: EBI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Small East African Zebu

text: EBI

text: YUMBE

text: KEI

text: Cattle UGBT-D2-0363 from NextGen project

text: 108 months

text: Uganda

text: 3.56848 degrees

text: 31.13442 degrees

text: Bos taurus x Bos indicus

text: Bos taurus x Bos indicus

text: female

text: Bos taurus x Bos indicus

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

text: public

characteristic: Submitter Id

text: Nsongora

text: EBI

text: KASESE

text: MUNKUNYU

text: Cattle UGBT-B8-0101 from NextGen project

text: 84 months

text: Uganda

text: 0.10449 degrees

text: 29.83887 degrees

text: Bos taurus x Bos indicus

characteristic: sampling date

text: Bos taurus x Bos indicus

text: female

text: Bos taurus x Bos indicus


text: EBI

characteristic: INSDC center name

text: public

characteristic: anonymized name

text: Ntoro

characteristic: breed

text: EBI

characteristic: broker name

text: KYENJOJO

text: BUTITI

text: Cattle UGBT-C7-0124 from NextGen project

text: 60 months

text: Uganda

text: 0.66433 degrees

text: 30.54278 degrees

text: Bos taurus x Bos indicus

text: Bos taurus x Bos indicus

text: female

characteristic: sex

text: Bos taurus x Bos indicus


text: EBI

text: public

text: Nganda

text: EBI

text: MASAKA

text: BUKOMANSIMBI

text: Cattle UGBT-E8-0196 from NextGen project

characteristic: description

text: 48 months

characteristic: estimated age

text: Uganda

characteristic: geographic location (country and/or sea)

text: -0.10428 degrees

characteristic: latitude

text: 31.56244 degrees

characteristic: longitude

text: Bos taurus x Bos indicus

text: Bos taurus x Bos indicus

text: female

text: Bos taurus x Bos indicus


text: EBI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Ankole Zebu cross

text: EBI

text: NAKASONGOLA

text: KAKOOGE

text: Cattle UGBT-F6-0526 from NextGen project

text: 60 months

text: Uganda

text: 1.14217 degrees

text: 32.4606 degrees

text: Bos taurus x Bos indicus

characteristic: organism

text: Bos taurus x Bos indicus

text: female

text: Bos taurus x Bos indicus


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

text: public

characteristic: Submitter Id

text: Ankole Zebu cross

text: EBI

text: KITGUM

text: MUCWIN

text: Cattle UGBT-G2-0446 from NextGen project

text: 48 months

text: Uganda

text: 3.35815 degrees

text: 32.94359 degrees

text: Bos taurus x Bos indicus

text: Bos taurus x Bos indicus

text: male

text: Bos taurus x Bos indicus

characteristic: title


text: Univ of Alabama at Birmingham

characteristic: INSDC center name

text: public

tag: Namespace:Univ of Alabama at Birmingham

text: ArrayExpress

characteristic: broker name

text: Protocols: The cultures were of Verticillium dahliae, strain VdLs.17, that was producing (MS) or not producing microsclerotia (NoMS). The NoMS culture could be considered the control. Cultures were grown at 25 C on potato dextrose agar overlaid with a nitrocellulose membrane. All MS and NoMS cultures were ten days old. Total RNA was extracted from the pulverized fungal tissue using a Qiagen RNeasy Kit (Valencia, CA) and following the manufacturer's instructions, and included an on-column DNase I digestion. The sequncing library was constructed by using ScriptSeq_V2 RNA-Seq Library Preparation kit.

text: Verticillium dahliae

text: Verticillium dahliae

text: microsclerotia-producing

characteristic: phenotype

text: Verticillium dahliae

text: fresh specimen

characteristic: specimen with known storage state

text: strain VdLs.17

characteristic: strain


text: Univ of Alabama at Birmingham

text: public

text: ArrayExpress

characteristic: description

text: Verticillium dahliae

text: Verticillium dahliae

text: not microsclerotia-producing

text: Verticillium dahliae

text: fresh specimen

text: strain VdLs.17


characteristic: ENA-CHECKLIST

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

text: EBI-UI

text: public

text: 16S rRNA genes, control sample without 13C labeling

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: EBI-UI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: 16S rRNA genes, density gradient fractionation 5 of sample L1, which was labeled by 13C for 5 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: EBI-UI

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 16S rRNA genes, density gradient fractionation 6 of sample L1, which was labeled by 13C for 5 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


characteristic: ENA-FIRST-PUBLIC

text: SRA-Webin

text: EBI-UI

text: public

text: 16S rRNA genes, density gradient fractionation 10 of sample L1, which was labeled by 13C for 5 days

text: root metagenome

characteristic: organism

text: root metagenome

text: switchgrass root microboes


characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: External Id

text: EBI-UI

text: public

text: 16S rRNA genes, density gradient fractionation 11 of sample L1, which was labeled by 13C for 5 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: EBI-UI

text: public

characteristic: Submitter Id

text: 16S rRNA genes, density gradient fractionation 12 of sample L1, which was labeled by 13C for 5 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes

characteristic: title


text: SRA-Webin

text: EBI-UI

characteristic: INSDC center name

text: public

text: 16S rRNA genes, density gradient fractionation 5 of sample L3, which was labeled by 13C for 5 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: EBI-UI

text: public

text: 16S rRNA genes, density gradient fractionation 6 of sample L3, which was labeled by 13C for 5 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: EBI-UI

text: public

text: 16S rRNA genes, density gradient fractionation 9 of sample L3, which was labeled by 13C for 5 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: EBI-UI

text: public

text: 16S rRNA genes, density gradient fractionation 10 of sample L3, which was labeled by 13C for 5 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: EBI-UI

text: public

text: 16S rRNA genes, density gradient fractionation 11 of sample L3, which was labeled by 13C for 5 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: EBI-UI

text: public

text: 16S rRNA genes, density gradient fractionation 12 of sample L3, which was labeled by 13C for 5 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: EBI-UI

text: public

text: 16S rRNA genes, density gradient fractionation 5 of sample L5, which was labeled by 13C for 8 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: EBI-UI

text: public

text: 16S rRNA genes, density gradient fractionation 6 of sample L5, which was labeled by 13C for 8 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: EBI-UI

text: public

text: 16S rRNA genes, density gradient fractionation 9 of sample L5, which was labeled by 13C for 8 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: EBI-UI

text: public

text: 16S rRNA genes, density gradient fractionation 10 of sample L5, which was labeled by 13C for 8 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: EBI-UI

text: public

text: 16S rRNA genes, density gradient fractionation 11 of sample L5, which was labeled by 13C for 8 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: EBI-UI

text: public

text: 16S rRNA genes, density gradient fractionation 12 of sample L5, which was labeled by 13C for 8 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: EBI-UI

text: public

text: 16S rRNA genes, density gradient fractionation 5 of sample L6, which was labeled by 13C for 8 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: EBI-UI

text: public

text: 16S rRNA genes, density gradient fractionation 6 of sample L6, which was labeled by 13C for 8 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: EBI-UI

text: public

text: 16S rRNA genes, density gradient fractionation 10 of sample L6, which was labeled by 13C for 8 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: EBI-UI

text: public

text: 16S rRNA genes, density gradient fractionation 11 of sample L6, which was labeled by 13C for 8 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: EBI-UI

text: public

text: 16S rRNA genes, density gradient fractionation 12 of sample L6, which was labeled by 13C for 8 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: EBI-UI

text: public

text: 18S rRNA genes, control sample without 13C labeling

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: EBI-UI

text: public

text: 18S rRNA genes, density gradient fractionation 5 of sample L1, which was labeled by 13C for 5 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: EBI-UI

text: public

text: 18S rRNA genes, density gradient fractionation 10 of sample L1, which was labeled by 13C for 5 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: EBI-UI

text: public

text: 18S rRNA genes, density gradient fractionation 12 of sample L1, which was labeled by 13C for 5 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: EBI-UI

text: public

text: 18S rRNA genes, density gradient fractionation 5 of sample L3, which was labeled by 13C for 5 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: EBI-UI

text: public

text: 18S rRNA genes, density gradient fractionation 6 of sample L3, which was labeled by 13C for 5 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: EBI-UI

text: public

text: 18S rRNA genes, density gradient fractionation 9 of sample L3, which was labeled by 13C for 5 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: EBI-UI

text: public

text: 18S rRNA genes, density gradient fractionation 11 of sample L3, which was labeled by 13C for 5 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: EBI-UI

text: public

text: 18S rRNA genes, density gradient fractionation 12 of sample L3, which was labeled by 13C for 5 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: EBI-UI

text: public

text: 18S rRNA genes, density gradient fractionation 6 of sample L5, which was labeled by 13C for 8 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: EBI-UI

text: public

text: 18S rRNA genes, density gradient fractionation 9 of sample L5, which was labeled by 13C for 8 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: EBI-UI

text: public

text: 18S rRNA genes, density gradient fractionation 10 of sample L5, which was labeled by 13C for 8 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


BO-BBH

text: SRA-Webin

text: UPS

text: public

text: BO-BBH

text: Zosterops borbonicus borbonicus

text: Zosterops borbonicus borbonicus

text: RAD-seq data


BO-GRY

text: SRA-Webin

text: UPS

text: public

text: BO-GRY

text: Zosterops borbonicus borbonicus

text: Zosterops borbonicus borbonicus

text: RAD-seq data


TE-BBH

text: SRA-Webin

text: UPS

text: public

text: TE-BBH

text: Zosterops borbonicus borbonicus

text: Zosterops borbonicus borbonicus

text: RAD-seq data


TE-GRY

text: SRA-Webin

text: UPS

text: public

text: TE-GRY

text: Zosterops borbonicus borbonicus

text: Zosterops borbonicus borbonicus

text: RAD-seq data


VO-GRY

text: SRA-Webin

text: UPS

text: public

text: VO-GRY

text: Zosterops borbonicus borbonicus

text: Zosterops borbonicus borbonicus

text: RAD-seq data


VO-BBH

text: SRA-Webin

text: UPS

text: public

text: VO-BBH

text: Zosterops borbonicus borbonicus

text: Zosterops borbonicus borbonicus

text: RAD-seq data


text: SRA-Webin

text: EBI-UI

text: public

text: 18S rRNA genes, density gradient fractionation 11 of sample L5, which was labeled by 13C for 8 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: EBI-UI

text: public

text: 18S rRNA genes, density gradient fractionation 12 of sample L5, which was labeled by 13C for 8 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: EBI-UI

text: public

text: 18S rRNA genes, density gradient fractionation 5 of sample L6, which was labeled by 13C for 8 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: EBI-UI

text: public

text: 18S rRNA genes, density gradient fractionation 6 of sample L6, which was labeled by 13C for 8 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: EBI-UI

text: public

text: 18S rRNA genes, density gradient fractionation 10 of sample L6, which was labeled by 13C for 8 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: EBI-UI

text: public

text: 18S rRNA genes, density gradient fractionation 11 of sample L6, which was labeled by 13C for 8 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: EBI-UI

text: public

text: 18S rRNA genes, density gradient fractionation 12 of sample L6, which was labeled by 13C for 8 days

text: root metagenome

text: root metagenome

text: switchgrass root microboes


text: SRA-Webin

text: UP-IGM

text: public

text: Mycobacterium canettii

text: Mycobacterium canettii


E-MTAB-1637:P run2_b

text: RIPCM

text: public

text: E-MTAB-1637:P run2_b

text: ArrayExpress

characteristic: broker name

text: protoplast

characteristic: cell type

text: Protocols: Moss gametophores were grown on modified agarized Knop medium (medium PPNO3) ?in 9cm Petri dishes. Protonema was grown on modified Knop medium and 500 mg/l of ammonium tartrate (medium PPNH4). Protoplasts were isolated from the protonema using a 0,5% solution of the enzyme Driselase (Sigma) in 0.48 M solution of mannitol.? Protonema, protoplast and gametophores were harvested and frozen. Total RNA was extracted by using the RNeasy Plant Mini Kit (Qiagen, USA) RNA libraries were prepared for sequencing using standard SOLiD? Total RNA-Seq Kit (PN 4452437 RevB) protocols.

text: Physcomitrella patens

text: Physcomitrella patens

text: Physcomitrella patens

text: fresh specimen

text: P run2_b


E-MTAB-1637:N run1

text: RIPCM

text: public

text: E-MTAB-1637:N run1

text: ArrayExpress

text: gametophore

text: Physcomitrella patens

text: Physcomitrella patens

text: Physcomitrella patens

text: fresh specimen

characteristic: specimen with known storage state

text: N run1


E-MTAB-1637:P run2_a

text: RIPCM

text: public

text: E-MTAB-1637:P run2_a

text: ArrayExpress

text: protoplast

characteristic: description

text: Physcomitrella patens

text: Physcomitrella patens

text: Physcomitrella patens

text: fresh specimen

text: P run2_a


E-MTAB-1637:P run2_d

text: RIPCM

text: public

text: E-MTAB-1637:P run2_d

text: ArrayExpress

text: protoplast

text: Physcomitrella patens

text: Physcomitrella patens

text: Physcomitrella patens

text: fresh specimen

text: P run2_d


E-MTAB-1637:G run1

text: RIPCM

text: public

text: E-MTAB-1637:G run1

text: ArrayExpress

text: gametophore

text: Physcomitrella patens

text: Physcomitrella patens

text: Physcomitrella patens

text: fresh specimen

text: G run1


E-MTAB-1637:N run2_c

text: RIPCM

text: public

text: E-MTAB-1637:N run2_c

text: ArrayExpress

text: protonema

text: Physcomitrella patens

text: Physcomitrella patens

text: Physcomitrella patens

text: fresh specimen

text: N run2_c


E-MTAB-1637:N run2_b

text: RIPCM

text: public

text: E-MTAB-1637:N run2_b

text: ArrayExpress

text: protonema

text: Physcomitrella patens

text: Physcomitrella patens

text: Physcomitrella patens

text: fresh specimen

text: N run2_b


E-MTAB-1637:P run2_c

text: RIPCM

text: public

text: E-MTAB-1637:P run2_c

text: ArrayExpress

text: protoplast

text: Physcomitrella patens

text: Physcomitrella patens

text: Physcomitrella patens

text: fresh specimen

text: P run2_c


E-MTAB-1637:G run2

text: RIPCM

text: public

text: E-MTAB-1637:G run2

text: ArrayExpress

text: gametophore

text: Physcomitrella patens

text: Physcomitrella patens

text: Physcomitrella patens

text: fresh specimen

text: G run2


E-MTAB-1637:N run2_a

text: RIPCM

text: public

text: E-MTAB-1637:N run2_a

text: ArrayExpress

text: protonema

text: Physcomitrella patens

text: Physcomitrella patens

text: Physcomitrella patens

text: fresh specimen

text: N run2_a


E-MTAB-1637:P run1

text: RIPCM

text: public

text: E-MTAB-1637:P run1

text: ArrayExpress

text: protonema

text: Physcomitrella patens

text: Physcomitrella patens

text: Physcomitrella patens

text: fresh specimen

text: P run1


characteristic: ENA-CHECKLIST

text: SRA-Webin

text: ECU

text: public

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: Han Chinese Stroke Patient


WGS_H. bulbosum1

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

text: IPK-Gatersleben

characteristic: INSDC first public

text: public

text: WGS_H. bulbosum1

text: Hordeum bulbosum

text: Hordeum bulbosum

text: WGS_H. bulbosum


text: SRA-Webin

text: KRIBB

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Soon-Chun Jeong

characteristic: collected by

text: soybean

text: The genomes of 10 cultivated accessions and six accessions of their wild progenitors (Glycine soja) to >15 × mean depth

text: Republic of Korea

characteristic: geographic location (country and/or sea)

text: Glycine max

text: Glycine max

text: Soybean genome variation revealed by high-depth resequencing of multiple cultivated and wild soybean genomes


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

text: KRIBB

text: public

characteristic: SRA accession

text: Soon-Chun Jeong

text: Republic of Korea

text: Glycine soja

characteristic: organism

text: Glycine soja


characteristic: External Id

characteristic: INSDC center name

text: public

tag: Namespace:Institute of Evolutionary Biology and Environmental Studies, University of Zurich

characteristic: Submitter Id

text: ArrayExpress

text: Protocols: Ten fully inbred sporophytes (strain XII5A) were surface sterilized and their spore content germinated in separate petri dishes (9 mm diameter) containing full strength Hoagland's medium (14h day/10h night, 40 mmol/m2/sec, 25 degrees C). Germinated spores (gametophyte_1) were collected after 3 days and protonemata (gametophyte_2) after 14 days of growth. RNA was extracted from four biological replicates (petri dishes) separately but were pooled in equimolar quantities prior to library preparation and RNA sequencing. After 14 days the protonematal mat of the remaining two plates were divided into 16 equal pieces and were transferred to liquid culture (full strength Hoagland's solution). After 5 days contents of the liquid cultures were emptied into small pots (5 x 5 cm) filled with soil (1:1 mixture of potting soil and sand) to initiate four gametophyte and 12 sporophyte pots. Plants were kept under these conditions until gametophores filled the pot (appr. 1.5-2 months). Plants were watered (ddH2O) from below. Gametophores (gametophyte_3) were then harvested from the four gametophyte pots separately. When the first gametangia appeared in the sporophyte pots (appr. after one month) they were watered (ddH2O) for 10 minutes at 120 minute intervals by an automatic misting system to help fertilization and sporophyte production. Samples of sporophyte_1, sporophyte_2 and sporophyte_3 were each collected from a block of four different pots. RNA was extracted separately from the four biological replicates (both gametophyte and sporophyte pots) but were pooled afterwards in equimolar quantities prior to library preparation and RNA sequencing. Samples of gametophyte_1, gametophyte_2 were collected 3 and 14 days after initiation of spore germination on medium in petri dishes. Sample gametophyte_3 was grown in the green house on soil in pots. We also collected three developmental stages of the sporophyte phase, specifically sporophytes shorter than 5mm (sporophyte_1), elongated needle-like sporophytes (sporophyte_2), and sporophytes with swollen capsules (sporophyte_3) from pots that were grown in the green house. We carried out all experiments with the strain XII5A. Total RNA was isolated separately from the tissues using the RNeasy Plant Mini Kit (Qiagen, Valencia, California, USA) following the manufacturers instructions with on-column DNA digestion. RNA was extracted from the four biological replicates separately but was pooled in equimolar quantities prior to library preparation and RNA sequencing. Single end unstranded libraries were prepared according to the protocols of Illumina

text: gametophore, gametophyte

characteristic: developmental stage

text: spore germination

characteristic: initial time point

text: Funaria hygrometrica

text: Funaria hygrometrica

text: Funaria hygrometrica

text: fresh specimen

characteristic: strain

text: 40 day

characteristic: time

characteristic: title


text: Institute of Evolutionary Biology and Environmental Studies, University of Zurich

characteristic: INSDC first public

text: public

text: ArrayExpress

characteristic: broker name

characteristic: description

text: with swollen capsuless, porophyte

text: Funaria hygrometrica

text: Funaria hygrometrica

text: Funaria hygrometrica

text: fresh specimen

characteristic: specimen with known storage state


WGS Genlisea hispidula

characteristic: ENA-CHECKLIST

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

text: IPK-Gatersleben

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: WGS Genlisea hispidula

text: genomic DNA of G. hispidula isolated from whole plants

text: Genlisea hispidula

text: Genlisea hispidula

text: WGS Genlisea hispidula


RNA Seq G. hispidula leaf

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

text: IPK-Gatersleben

text: public

characteristic: SRA accession

text: RNA Seq G. hispidula leaf

text: total RNA from leaf tissue of G. hispidula

text: Genlisea hispidula

characteristic: organism

text: Genlisea hispidula

text: RNA Seq G. hispidula leaf


BEC_H. Spontaneum FT11

text: SRA-Webin

characteristic: External Id

text: IPK-Gatersleben

characteristic: INSDC center name

text: public

text: BEC_H. Spontaneum FT11

characteristic: Submitter Id

text: Exome capture of H. Spontaneum FT11

text: Hordeum vulgare subsp. spontaneum

text: Hordeum vulgare subsp. spontaneum

text: H. Spontaneum FT11


BEC_H. Bulbosum A12

text: SRA-Webin

text: IPK-Gatersleben

text: public

text: BEC_H. Bulbosum A12

text: Exome capture of H. Bulbosum A12

text: Hordeum bulbosum

text: Hordeum bulbosum

text: H. Bulbosum A12


BEC_H. Pubiflorum BCC2028

text: SRA-Webin

text: IPK-Gatersleben

text: public

text: BEC_H. Pubiflorum BCC2028

text: Exome capture of H. Pubiflorum BCC2028

text: Hordeum pubiflorum

text: Hordeum pubiflorum

text: H. Pubiflorum BCC2028


BEC_H. Spontaneum OUH602

text: SRA-Webin

text: IPK-Gatersleben

text: public

text: BEC_H. Spontaneum OUH602

text: Exome capture of H. Spontaneum OUH602

text: Hordeum vulgare subsp. spontaneum

text: Hordeum vulgare subsp. spontaneum

text: H. Spontaneum OUH602


BEC_H. Bulbosum ?

text: SRA-Webin

text: IPK-Gatersleben

text: public

text: BEC_H. Bulbosum ?

text: Exome capture of H. Bulbosum ?

text: Hordeum bulbosum

text: Hordeum bulbosum

text: H. Bulbosum ?


BEC_H. Bulbosum ??

text: SRA-Webin

text: IPK-Gatersleben

text: public

text: BEC_H. Bulbosum ??

text: Exome capture of H. Bulbosum ??

text: Hordeum bulbosum

text: Hordeum bulbosum

text: H. Bulbosum ??


BEC_H. Spontaneum ?

text: SRA-Webin

text: IPK-Gatersleben

text: public

text: BEC_H. Spontaneum ?

text: Exome capture of H. Spontaneum ?

text: Hordeum vulgare subsp. spontaneum

text: Hordeum vulgare subsp. spontaneum

text: H. Spontaneum ?


Caulerpa spp1

text: SRA-Webin

text: CCMAR

text: public

text: Caulerpa spp1

text: Caulerpa

text: Caulerpa

text: THE ENDOPHYTIC BACTERIAL COMMUNITIES IN MEDITERRANEAN INVASIVE AND NATIVE CAULERPA SPECIES


ACDC

text: SRA-Webin

text: UCB

text: public

text: ACDC

text: Shewanella algae

text: Shewanella algae


text: public

text: ArrayExpress

text: shorter than 5mm, sporophyte

characteristic: developmental stage

text: Funaria hygrometrica

text: Funaria hygrometrica

text: Funaria hygrometrica

text: fresh specimen

characteristic: strain


characteristic: INSDC first public

text: public

text: ArrayExpress

text: protonemata, gametophyte

text: spore germination

characteristic: initial time point

text: Funaria hygrometrica

text: Funaria hygrometrica

text: Funaria hygrometrica

text: fresh specimen

text: 14 day

characteristic: time

characteristic: title


text: public

text: ArrayExpress

characteristic: broker name

characteristic: description

text: elongated needle-like, sporophyte

text: Funaria hygrometrica

text: Funaria hygrometrica

text: Funaria hygrometrica

text: fresh specimen

characteristic: specimen with known storage state


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: spore germination, gametophyte

text: spore germination

text: Funaria hygrometrica

text: Funaria hygrometrica

text: Funaria hygrometrica

text: fresh specimen

text: 3 day


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: MRC National Institute for Medical Research

text: public

text: ArrayExpress

text: Protocols: M. tuberculosis H37Rv (ATCC 25618) was grown at 37C in modified Dubos medium (Difco) supplemented with 4% Dubos medium albumin (Difco) and 0.5% w/v glycerol. RNA was prepared using a FastRNA pro blue kit (Qbiogene). Contaminating DNA was removed using a TURBO DNA-free kit (Ambion) 2-3 ug of total RNA were fragmented (Ambion Cat # AM8740) and strand-specific cDNA libraries were constructed using the Illumina directional mRNA-Seq protocol (Part # 15018460 Rev. A) but with exclusion of polyA-tail and size selection to capture all RNA species. Briefly, this protocol ligates the Illumina v1.5 small RNA 3prime adapter followed by a 5prime adapter to preserve strand specificity.

text: HigB overexpressing

characteristic: genotype

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: fresh specimen


characteristic: External Id

text: public

characteristic: SRA accession

text: ArrayExpress

text: empty vector

text: Mycobacterium tuberculosis

characteristic: organism

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: fresh specimen


characteristic: ENA-CHECKLIST

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

text: ITB-CNR

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: human

characteristic: common name

text: DNA from blood sample

text: Homo sapiens

text: Homo sapiens

text: Genomic DNA


text: SRA-Webin

text: FFUL

characteristic: INSDC first public

text: public

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis clinical isolate

characteristic: title


text: SRA-Webin

text: FFUL

text: public

text: Mycobacterium

characteristic: genus

characteristic: isolate

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

type: AMR curated data - CABBAGE

value: pretomanid

value: broth dilution

value: mg/L

value: Mycobacterium tuberculosis


text: SRA-Webin

text: CHX

characteristic: INSDC last update

text: public

text: dog

text: DNA of tumor, animal #49, mate-pair sequencing

characteristic: description

text: Canis lupus familiaris

text: Canis lupus familiaris

characteristic: specimen voucher

text: tumor

characteristic: tissue type


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

text: CHX

text: public

characteristic: INSDC status

text: dog

text: DNA of peripheral blood cells, animal #49, mate-pair sequencing

text: Canis lupus familiaris

text: Canis lupus familiaris

text: PBMC


text: SRA-Webin

characteristic: External Id

text: CHX

text: public

characteristic: SRA accession

text: dog

text: DNA of tumor, animal #47, mate-pair sequencing

text: Canis lupus familiaris

characteristic: organism

text: Canis lupus familiaris

text: tumor


characteristic: ENA-CHECKLIST

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

text: CHX

characteristic: INSDC center name

text: public

text: dog

text: DNA of tumor, animal #52, mate-pair sequencing

text: Canis lupus familiaris

text: Canis lupus familiaris

text: tumor


text: SRA-Webin

text: CHX

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: dog

characteristic: common name

text: DNA of tumor, animal #35, mate-pair sequencing

text: Canis lupus familiaris

text: Canis lupus familiaris

text: tumor


text: SRA-Webin

text: CHX

text: public

text: dog

text: DNA of tumor, animal #30, mate-pair sequencing

text: Canis lupus familiaris

text: Canis lupus familiaris

text: tumor

characteristic: title


text: SRA-Webin

text: CHX

characteristic: INSDC last update

text: public

text: dog

text: DNA of peripheral blood cells, animal #47, mate-pair sequencing

text: Canis lupus familiaris

text: Canis lupus familiaris

text: PBMC


text: SRA-Webin

text: CHX

text: public

text: dog

text: DNA of peripheral blood cells, animal #52, mate-pair sequencing

characteristic: description

text: Canis lupus familiaris

text: Canis lupus familiaris

text: PBMC


text: SRA-Webin

text: CHX

text: public

text: dog

text: DNA of peripheral blood cells, animal #35, mate-pair sequencing

text: Canis lupus familiaris

text: Canis lupus familiaris

characteristic: specimen voucher

text: PBMC


text: SRA-Webin

text: CHX

text: public

text: dog

text: DNA of peripheral blood cells, animal #30, mate-pair sequencing

text: Canis lupus familiaris

text: Canis lupus familiaris

text: PBMC

characteristic: tissue type


characteristic: ENA-FIRST-PUBLIC

text: SRA-Webin

text: CHX

text: public

text: dog

text: DNA of tumor, animal #49, paired-end sequencing

text: Canis lupus familiaris

text: Canis lupus familiaris

text: tumor


characteristic: ENA-LAST-UPDATE

text: SRA-Webin

text: CHX

text: public

text: dog

text: DNA of peripheral blood cells, animal #49, paired-end sequencing

text: Canis lupus familiaris

text: Canis lupus familiaris

text: PBMC


text: SRA-Webin

text: CHX

text: public

characteristic: INSDC status

text: dog

text: DNA of tumor, animal #47, paired-end sequencing

text: Canis lupus familiaris

text: Canis lupus familiaris

text: tumor


text: SRA-Webin

characteristic: External Id

text: CHX

text: public

text: dog

text: DNA of peripheral blood cells, animal #47, paired-end sequencing

text: Canis lupus familiaris

text: Canis lupus familiaris

text: PBMC


text: SRA-Webin

text: CHX

text: public

characteristic: SRA accession

text: dog

text: cell-free plasma DNA, animal #49, paired-end sequencing

text: Canis lupus familiaris

text: Canis lupus familiaris

text: cell-free plasma DNA


text: SRA-Webin

text: CHX

text: public

text: dog

text: cell-free plasma DNA, animal #47, paired-end sequencing

text: Canis lupus familiaris

characteristic: organism

text: Canis lupus familiaris

text: cell-free plasma DNA


characteristic: ENA-CHECKLIST

text: SRA-Webin

text: PASTEUR INSTITUTE PARIS

text: public

tag: Namespace:PASTEUR INSTITUTE PARIS

text: Cells treated with SFB9 at 0 hours biological replicate 1

text: Entamoeba histolytica

text: Entamoeba histolytica


text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

text: PASTEUR INSTITUTE PARIS

text: public

text: Cells treated with SFB9 at 0 hours biological replicate 2

text: Entamoeba histolytica

text: Entamoeba histolytica


text: SRA-Webin

text: PASTEUR INSTITUTE PARIS

characteristic: INSDC center name

text: public

text: Cells treated with SFB9 at 0 hours biological replicate 3

text: Entamoeba histolytica

text: Entamoeba histolytica


text: SRA-Webin

text: PASTEUR INSTITUTE PARIS

characteristic: INSDC first public

text: public

text: Cells treated with SFB9 at 12 hours biological replicate 1

text: Entamoeba histolytica

text: Entamoeba histolytica


text: SRA-Webin

text: PASTEUR INSTITUTE PARIS

text: public

characteristic: Submitter Id

text: Cells treated with SFB9 at 12 hours biological replicate 2

text: Entamoeba histolytica

text: Entamoeba histolytica


text: SRA-Webin

text: PASTEUR INSTITUTE PARIS

text: public

text: Cells treated with SFB9 at 12 hours biological replicate 3

text: Entamoeba histolytica

text: Entamoeba histolytica


text: SRA-Webin

text: PASTEUR INSTITUTE PARIS

text: public

text: Cells treated with SFB9 at 24 hours biological replicate 1

text: Entamoeba histolytica

text: Entamoeba histolytica


text: SRA-Webin

text: PASTEUR INSTITUTE PARIS

text: public

text: Cells treated with SFB9 at 24 hours biological replicate 2

text: Entamoeba histolytica

text: Entamoeba histolytica


text: SRA-Webin

text: PASTEUR INSTITUTE PARIS

text: public

text: Cells treated with SFB9 at 24 hours biological replicate 3

text: Entamoeba histolytica

text: Entamoeba histolytica


text: SRA-Webin

text: PASTEUR INSTITUTE PARIS

text: public

text: Cells treated with DMSO at 0 hours biological replicate 1

text: Entamoeba histolytica

text: Entamoeba histolytica


2: pennellii leaf

text: ICL-CFB

text: public

text: 2: pennellii leaf

characteristic: cultivar

text: Leaf tissue was obtained from the 8th leaf from the apex of 8-week old plants, grown in a glasshouse supplemented with artificial light for a 16/8 h photoperiod at 120 μmol m-2 s-1 PAR (photosynthetically active radiation) irradiance.

text: Solanum pennellii

text: Solanum pennellii

text: 8th leaf from apex of 8 week old plant

characteristic: tissue

text: Solanum pennellii leaf


3: periclinal chimera leaf

text: ICL-CFB

characteristic: INSDC last update

text: public

text: S. lycopersicum Heinz 1706 x S. pennellii LA716

characteristic: Progenitor Lines

text: 3: periclinal chimera leaf

text: A periclinal chimera was generated by grafting Solanum lycopersicum Heinz 1706 with Solanum pennellii LA716, with the L1 layer derived from S. pennellii and the L2 and L3 layers derived from S. lycopersicum. Leaf tissue was obtained from the 8th leaf from the apex of 8-week old plants, grown in a glasshouse supplemented with artificial light for a 16/8 h photoperiod at 120 μmol m-2 s-1 PAR (photosynthetically active radiation) irradiance.

text: Solanum lycopersicum x Solanum pennellii

text: 8th leaf from apex of 8 week old plant

text: periclinal chimera leaf

characteristic: title


5: pennellii dehydrated leaf

text: ICL-CFB

text: public

text: 5: pennellii dehydrated leaf

text: Leaf tissue was obtained from the 8th leaf from the apex of 8-week old plants, grown in a glasshouse supplemented with artificial light for a 16/8 h photoperiod at 120 μmol m-2 s-1 PAR (photosynthetically active radiation) irradiance. Water stress was induced by placing the leaves on a dry filter paper, and allowing them to develop 24 hours, resulting in an estimated 30% loss of fresh-weight.

characteristic: description

text: Solanum pennellii

text: Solanum pennellii

text: 8th leaf with 30% loss of fresh weight

text: Solanum pennellii dehydrated leaf


6: periclinal chimera dehydrated leaf

characteristic: ENA-FIRST-PUBLIC

text: ICL-CFB

text: public

text: 6: periclinal chimera dehydrated leaf

text: A periclinal chimera was generated by grafting Solanum lycopersicum Heinz 1706 with Solanum pennellii LA716, with the L1 layer derived from S. pennellii and the L2 and L3 layers derived from S. lycopersicum. Leaf tissue was obtained from the 8th leaf from the apex of 8-week old plants, grown in a glasshouse supplemented with artificial light for a 16/8 h photoperiod at 120 μmol m-2 s-1 PAR (photosynthetically active radiation) irradiance. Water stress was induced by placing the leaves on a dry filter paper, and allowing them to develop for 24 hours, resulting in an estimated 30% loss of fresh-weight.

text: 8th leaf with 30% loss of fresh weight

text: periclinal chimera dehydrated leaf


8: pennellii fruit

characteristic: ENA-LAST-UPDATE

text: ICL-CFB

text: public

text: 8: pennellii fruit

text: Solanum pennellii

text: Solanum pennellii

text: Mature green fruit

text: Solanum pennellii fruit


9: periclinal chimera fruit

text: ICL-CFB

text: public

characteristic: INSDC status

text: 9: periclinal chimera fruit

text: A periclinal chimera was generated by grafting Solanum lycopersicum Heinz 1706 with Solanum pennellii LA716, with the L1 layer derived from S. pennellii and the L2 and L3 layers derived from S. lycopersicum.

text: Mature green fruit

text: periclinal chimera fruit


text: SRA-Webin

characteristic: External Id

text: PASTEUR INSTITUTE PARIS

text: public

text: Cells treated with DMSO at 0 hours biological replicate 2

text: Entamoeba histolytica

text: Entamoeba histolytica


text: SRA-Webin

text: PASTEUR INSTITUTE PARIS

text: public

characteristic: SRA accession

text: Cells treated with DMSO at 0 hours biological replicate 3

text: Entamoeba histolytica

text: Entamoeba histolytica


text: SRA-Webin

text: PASTEUR INSTITUTE PARIS

text: public

text: Cells treated with DMSO at 12 hours biological replicate 1

text: Entamoeba histolytica

characteristic: organism

text: Entamoeba histolytica


characteristic: ENA-CHECKLIST

text: SRA-Webin

text: PASTEUR INSTITUTE PARIS

text: public

text: Cells treated with DMSO at 12 hours biological replicate 2

text: Entamoeba histolytica

text: Entamoeba histolytica


text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

text: PASTEUR INSTITUTE PARIS

text: public

text: Cells treated with DMSO at 12 hours biological replicate 3

text: Entamoeba histolytica

text: Entamoeba histolytica


text: SRA-Webin

text: PASTEUR INSTITUTE PARIS

characteristic: INSDC center name

text: public

text: Cells treated with DMSO at 24 hours biological replicate 1

text: Entamoeba histolytica

text: Entamoeba histolytica


text: SRA-Webin

text: PASTEUR INSTITUTE PARIS

characteristic: INSDC first public

text: public

text: Cells treated with DMSO at 24 hours biological replicate 2

text: Entamoeba histolytica

text: Entamoeba histolytica


text: SRA-Webin

text: PASTEUR INSTITUTE PARIS

text: public

characteristic: Submitter Id

text: Cells treated with DMSO at 24 hours biological replicate 3

text: Entamoeba histolytica

text: Entamoeba histolytica


text: SRA-Webin

text: ECU

text: public

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: Individual bjy12 - Han stroke patient


text: SRA-Webin

text: ECU

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Individual bjy15 - Han stroke patient


text: SRA-Webin

text: IGH

text: public

text: Cylicostephanus goldi

text: Cylicostephanus goldi

text: Transcriptome sequencing of adult Cylicostephanus goldi


Kefir 3

text: SRA-Webin

text: APC

text: public

text: Kefir 3

text: food metagenome

text: food metagenome

text: Sequenicng of kefir


Kefir 4

text: SRA-Webin

text: APC

text: public

text: Kefir 4

text: food metagenome

text: food metagenome

text: Sequenicng of kefir


Kefir 5

text: SRA-Webin

text: APC

text: public

text: Kefir 5

text: food metagenome

text: food metagenome

text: Sequenicng of kefir


Kefir 6

text: SRA-Webin

text: APC

text: public

text: Kefir 6

text: food metagenome

text: food metagenome

text: Sequenicng of kefir


text: SRA-Webin

text: FFUL

text: public

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis clinical isolate


Water Kefir / Kombucha 1

text: SRA-Webin

text: APC

text: public

text: Water Kefir / Kombucha 1

text: food metagenome

text: food metagenome

text: Water Kefir / Kombucha


Water Kefir / Kombucha 2

text: SRA-Webin

text: APC

text: public

text: Water Kefir / Kombucha 2

text: food metagenome

text: food metagenome

text: Water Kefir / Kombucha


Water Kefir / Kombucha 3

text: SRA-Webin

text: APC

text: public

text: Water Kefir / Kombucha 3

text: food metagenome

text: food metagenome

text: Water Kefir / Kombucha


Water Kefir / Kombucha 4

text: SRA-Webin

text: APC

text: public

text: Water Kefir / Kombucha 4

text: food metagenome

text: food metagenome

text: Water Kefir / Kombucha


text: SRA-Webin

text: CAM

text: public

text: fruit fly

text: Drosophila melanogaster

text: Drosophila melanogaster

text: female

characteristic: sex

text: ovaries

characteristic: tissue type

text: Wolbachia variants


wMelPop

text: SRA-Webin

text: CAM

characteristic: INSDC last update

text: public

text: wMelPop

text: fruit fly

text: Drosophila melanogaster

text: Drosophila melanogaster

text: female

text: ovaries

text: Wolbachia variants


E-MTAB-1675:Virus-prep-Group C

text: School of Life Sciences

text: public

text: E-MTAB-1675:Virus-prep-Group C

tag: Namespace:School of Life Sciences

text: ArrayExpress

characteristic: broker name

text: Protocols: Deformed wing virus was replicating in its host, honeybee (Apis mellifra). Bees were developing in a brood frame Varroa-free colony for 3 days after hatching from egg. Then the entire brood frame with bee larvae was transferred to a Varroa-infested colony with high levels of Deformed wing virus (DWV). Both Varroa-free colony and Varroa-infested colony were kept in outdoor flight cages, bees were fed with pollen sourced in Varroa-free region and with sugar syrup. Deformed wing virus (DWV) was produced in its honeybee (Apis mellifera) host subjected to the following treatments. Larvae of Apis mellifra workers (day 3 of bee development), which were hatched from the eggs laid in a colony free from Varroa destructor mites and harbouring low levels of DWV, were either left to develop in the same Varroa-free hive before sampling at pupal stage (day 15) (EnvironmentalHistory- NoTransfer), or were transferred to a Varroa-infested colony with high levels of DWV in bees and the mites (EnvironmentalHistory- TransferToVarroaColony). All transferred larvae were receiving the DWV strains present in this Varroa-infested colony with the food delivered by the nurse bees until capping on day 9. About half of these larvae were capped with Varroa mite and were subjected to the mite piercing and feeding on their haemolymph for 5 days during pupal development until sampling on day 14 (GrowthCondition - MiteFeeding), the rest of the pupae developed without the mite (GrowthCondition - NoMite). Exposure to the mite piercing and feeding resulted in about 1000-fold increase of the DWV levels, overt infection, in about 80% of the mite-exposed pupae (DiseaseState- HighDWV). Preparations of DWV were isolated from Varroa-free control pupae (Virus-prep-Group C), Varroa-free transferred pupae (Virus-prep-Group NV), and Varroa exposed overtly infected pupae (Virus-prep-Group VH). The DWV preparations were injected to haemolymph of the Varroa-free bee pupae, day 11 of bee development, (GrowthCondition - InjectVirusC, - InjectVirusC and - InjectVirusVH, respectively). The injected pupae were incubated in high humidity at +35C for four days (EnvironmentalHistory- Incubator) before development of overt DWV infection (DiseaseState - HighDWV), at this stage total RNA was extracted from the infected pupae. A series of the DWV cDNA fragment covering complete DWV genomic RNA sequences were amplified by RT-PCR using RNA extracted from all virus preparations and the RNA extracts from the injected pupae. The cDNA preparations were sequenced using next generation paired-end sequencing to obtain data on the DWV strain composition. TRIzol reagent (Invitrogen) extraction of total RNA from whole pupae pools and from the virus preparations A series of seven overlapping RT-PCR fragments, ranging from 1.5 to 2.5 kb covering entire DWV genomic RNA sequence, were generated for each the RNA extracts. The cDNA samples were used for library construction using Illumina DNA protocol.

text: NoMite

characteristic: growth condition

text: Apis mellifera

characteristic: host

text: Virus-prep-Group C

characteristic: individual

text: Deformed wing virus

text: Deformed wing virus

text: Deformed wing virus

text: Virus-prep-Group C

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: School of Life Sciences

text: public

characteristic: INSDC status

text: E-MTAB-1675:Injected-with-Virus-prep-Group NV

text: ArrayExpress

characteristic: description

text: Apis mellifera

text: Injected-with-Virus-prep-Group NV

text: Deformed wing virus

text: Deformed wing virus

text: Deformed wing virus

text: Injected-with-Virus-prep-Group NV


text: School of Life Sciences

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-1675:Injected-with-Virus-prep-Group VH

text: ArrayExpress

text: Apis mellifera

text: Injected-with-Virus-prep-Group VH

text: Deformed wing virus

characteristic: organism

text: Deformed wing virus

text: Deformed wing virus

text: Injected-with-Virus-prep-Group VH


text: School of Life Sciences

characteristic: INSDC first public

text: public

text: E-MTAB-1675:Injected-with-Virus-prep-Group C

characteristic: Submitter Id

text: ArrayExpress

text: Apis mellifera

text: Injected-with-Virus-prep-Group C

text: Deformed wing virus

text: Deformed wing virus

text: Deformed wing virus

text: Injected-with-Virus-prep-Group C


E-MTAB-1675:Virus-prep-Group NV

text: School of Life Sciences

text: public

text: E-MTAB-1675:Virus-prep-Group NV

text: ArrayExpress

text: NoMite

text: Apis mellifera

text: Virus-prep-Group NV

text: Deformed wing virus

text: Deformed wing virus

text: Deformed wing virus

text: Virus-prep-Group NV


E-MTAB-1675:Virus-prep-Group VH

text: School of Life Sciences

text: public

text: E-MTAB-1675:Virus-prep-Group VH

text: ArrayExpress

text: MiteFeeding

text: Apis mellifera

text: Virus-prep-Group VH

text: Deformed wing virus

text: Deformed wing virus

text: Deformed wing virus

text: Virus-prep-Group VH


characteristic: ENA-CHECKLIST

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

text: CHX

text: public

text: dog

characteristic: common name

text: PBMC DNA, animal #52, paired-end

text: Canis lupus familiaris

text: Canis lupus familiaris

characteristic: specimen voucher

text: PBMC

characteristic: tissue type


text: SRA-Webin

text: CHX

characteristic: INSDC last update

text: public

text: dog

text: PBMC DNA, animal #N27, paired-end

text: Canis lupus familiaris

text: Canis lupus familiaris

text: PBMC


text: SRA-Webin

text: UMU

text: public

text: human

text: clear cell renal cell carcinoma

text: Homo sapiens

text: Homo sapiens

text: kidney

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: SRA-Webin

text: UMU

text: public

text: human

text: Normal kidney cortex

text: Homo sapiens

text: Homo sapiens

text: kidney


characteristic: ENA-LAST-UPDATE

text: SRA-Webin

text: UMU

text: public

text: human

text: normal kidney cortex

text: Homo sapiens

text: Homo sapiens

text: kidney


text: SRA-Webin

characteristic: External Id

text: UMU

text: public

text: human

text: Control subject

text: Homo sapiens

text: Homo sapiens

text: peripheral blood


Day 4 ICU

text: SRA-Webin

text: UMCU

text: public

characteristic: INSDC status

text: Day 4 ICU

text: human gut metagenome

text: human gut metagenome

text: Selective Decontamination of the Digestive tract (SDD) selects for antibiotic resistance in patient gut microbiota


Day 14 ICU

text: SRA-Webin

text: UMCU

text: public

text: Day 14 ICU

text: human gut metagenome

text: human gut metagenome


Day 16 ICU

text: SRA-Webin

text: UMCU

text: public

text: Day 16 ICU

text: human gut metagenome

text: human gut metagenome


text: SRA-Webin

text: UK ESSEN

text: public

tag: Namespace:UK ESSEN

characteristic: anonymized name

text: human

text: Homo sapiens

text: Homo sapiens

text: m

characteristic: sex

text: blood

text: Generic sample from Homo sapiens


text: SRA-Webin

text: UK ESSEN

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: human

text: Homo sapiens

text: Homo sapiens

text: f

text: blood

text: Generic sample from Homo sapiens


text: SRA-Webin

text: UK ESSEN

characteristic: INSDC first public

text: public

characteristic: chromosome 3 status

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: m

text: tumor

text: Generic sample from Homo sapiens


characteristic: ENA-CHECKLIST

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

text: UK ESSEN

text: public

characteristic: Submitter Id

text: human

text: Homo sapiens

text: Homo sapiens

text: f

text: tumor

text: Generic sample from Homo sapiens


text: SRA-Webin

text: SU

text: public

text: human

characteristic: common name

text: pool of cDNA from multiple tissues

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: 20 different tissues

characteristic: tissue lib

text: human tissue panel


Reindeer 1-11

characteristic: ENA-FIRST-PUBLIC

text: SRA-Webin

text: EMC

characteristic: INSDC last update

text: public

text: Reindeer 1-11

text: Eye swab

characteristic: bio material

text: 14 March 2012

characteristic: collection date

text: 454-sequencing on reindeer with/without IKC symptoms

text: Norway

characteristic: geographic location (country and/or sea)

text: Rangifer tarandus tarandus

characteristic: host

text: Rangifer tarandus tarandus

text: Rangifer tarandus tarandus

text: Identification and characterization of two novel viruses in ocular infections in reindeer

characteristic: title


DRS exp2 WT rep 1

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: External Id

text: DUNDEE

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: DRS exp2 WT rep 1

text: thale cress

text: Direct RNA sequencing of A. thaliana transcriptome, Wild Type replicate 1

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: WT replicate 1