characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: age unit

characteristic: altitude

text: n

characteristic: depth

text: BLANK.St.glass

characteristic: description

text: BLANK.St.glass

text: ENVO:sterile water

text: ENVO:sterile water

text: ENVO:sterile water

text: GAZ:United States of America

text: MiSeq

text: human gut metagenome

characteristic: organism

text: n

text: BLANK.St.glass

text: human gut metagenome

text: BLANK.St.glass


status: PUBLIC

tag: attribute

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

text: SLU

text: public

characteristic: SRA accession

text: horse

characteristic: common name

text: Equus caballus

text: Equus caballus

text: MCOA

characteristic: title

type: has member


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: MSUCME

text: public

characteristic: collection date

unit: m

text: temperate grassland

characteristic: environment (biome)

text: field soil

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: soil

characteristic: environmental package

text: USA

characteristic: geographic location (country and/or sea,region)

text: USA

characteristic: geographic location (elevation)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: soil metagenome

text: Functional gene amplicon sequencing: Inorganic N and aromatic hydrocarbon degrading genes

characteristic: project name

text: soil metagenome

text: pyrosequencing

characteristic: sequencing method

text: Michigan Prairie


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1452:fut2positive.day56.80.PSdef

characteristic: Submitter Id

characteristic: altitude

text: n

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: PSdef

characteristic: chow

text: All samples collected between Sept. 2010 and Dec. 2011

text: mouse gut metagenome

characteristic: depth

text: WT mouse fecal sample

characteristic: description

text: WT mouse fecal sample

text: Regular chow/PS def

characteristic: elevation

text: ENVO:mammalia-associated habitat

characteristic: env biome

text: ENVO:mammalia-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: WT

characteristic: genotype

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: mouse gut metagenome

characteristic: organism

text: n

characteristic: public

text: .1, g

characteristic: sample id

characteristic: sample name

characteristic: sampling day

text: mouse gut metagenome

characteristic: taxon id


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: n

text: Mice ceca

text: UBERON:cecum

characteristic: body habitat

text: UBERON:cecum

characteristic: body product

characteristic: depth

text: fecal samples from mice colonized with the unculture collection from MZ twin pair 4

characteristic: donor

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:organic material feature

text: GAZ:United States of America

characteristic: host taxid

text: gut metagenome

text: n

text: gut metagenome

text: Titanium

characteristic: sequencing technology

characteristic: title

text: Cecal micro biome of mice humanized with the uncultured and cultured microbiota from twins discordant for obesity


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: WUSL

text: public

characteristic: collection date

text: Low fat high plant polysacharides

characteristic: diet

text: host associated

characteristic: environment (biome)

text: gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: house mouse

characteristic: host common name

characteristic: host subject id

text: metagenome

characteristic: investigation type

text: mouse gut metagenome

characteristic: organism

characteristic: project name

text: mouse gut metagenome

text: Illumina

characteristic: sequencing method

text: Mouse fecal sample for COPRO-Seq


characteristic: ENA-CHECKLIST

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: UMCU

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: Sample from peritoneal metastasis bladder patient 2

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CCME-COLORADO

text: public

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: human gut metagenome

characteristic: depth

text: CultureInitiativeExperiment.ArrayedInvasion

characteristic: description

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: wild-type

characteristic: genotype

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: Mus musculus

characteristic: host common name

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: human gut metagenome

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: human gut metagenome

characteristic: sex

characteristic: taxon id

text: Cultured gut bacterial consortia from twins discordant for obesity modulate adiposity in gnotobiotic mice


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1522:tp1.Lean.CI.E01.Complete.15dpc.CI07

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: human gut metagenome

characteristic: common name

characteristic: depth

characteristic: description

text: LowFat-RichinPlantPolysaccharide Chow

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:feces

text: wild-type

text: GAZ:United States of America

text: Mus musculus

characteristic: host subject id

text: human gut metagenome

characteristic: organism

text: n

text: human gut metagenome

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: BGI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: human gut

characteristic: environment (biome)

text: human-associated habitat

characteristic: environment (feature)

text: faeces

characteristic: environment (material)

text: human-gut

characteristic: environmental package

text: Denmark

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: human gut metagenome

text: MetaHIT-Richness

characteristic: project name

text: human gut metagenome

text: Illumina

characteristic: sequencing method

text: Stool sample from danish


text: CCME-COLORADO

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1523:tp4.Obese.DTFD.E02.15dpc.PM73

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: mouse gut metagenome

characteristic: common name

characteristic: depth

text: DTFD Monozygotic Discordant Twins

characteristic: description

text: DTFD Monozygotic Discordant Twins

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: donor

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: wild-type

characteristic: genotype

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: mouse

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: mouse gut metagenome

characteristic: organism

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: mouse gut metagenome

characteristic: sex

characteristic: taxon id


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1522:tp1.CI.E03.15dpc.3Ln37.6

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: human gut metagenome

characteristic: common name

characteristic: depth

characteristic: description

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: elevation

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:feces

text: wild-type

text: GAZ:United States of America

text: Mus musculus

text: human gut metagenome

text: n

text: human gut metagenome

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: qiime_study_1523:tp4.Obese.DTFD.E02.Colon2.C.PM79

text: y

text: UBERON:colon

text: UBERON:colonic mucosa

text: UBERON:colonic mucosa

text: mouse gut metagenome

text: ALG samples for mice colonized with the Microbiota of co-twins discordant for obesity

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: donor

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:organic material feature

characteristic: env matter

text: wild-type

characteristic: genotype

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: mouse

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: mouse gut metagenome

characteristic: organism

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: mouse gut metagenome

characteristic: sex

characteristic: taxon id


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1523:tp1.Obese.DTFD.E01.3dpc.PM51

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: mouse gut metagenome

characteristic: common name

characteristic: depth

text: 16s time course analysis of cecal contents collected from mice colonized with discordant twins microbiota

characteristic: description

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: donor

characteristic: elevation

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:feces

text: wild-type

text: GAZ:United States of America

text: mouse

text: mouse gut metagenome

text: n

text: mouse gut metagenome

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Sub-adult

characteristic: age group

text: n

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of back

text: Jordan Kueneman

characteristic: collector name

text: organismal metagenome

text: Anaxyrus boreas_from_site_Eagle lake

text: Anaxyrus boreas_from_site_Eagle lake

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:sebum

characteristic: env matter

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: boreal toad

characteristic: host common name

text: Anaxyrus boreas

characteristic: host species

characteristic: host subject id

characteristic: host taxid

text: Anbo

characteristic: latitude

characteristic: longitude

text: organismal metagenomes

characteristic: organism

characteristic: park

characteristic: ph

text: n

characteristic: public

characteristic: redox potential

text: NR

text: swab

characteristic: sample id

characteristic: sample name

text: Eagle lake

characteristic: sample site

text: CA

characteristic: sample state

text: organismal metagenomes

characteristic: spcond

text: mS/cm

characteristic: taxon id

characteristic: temp

text: The amphibian skin microbiome across species, space and life history stages

text: dipnet

characteristic: trap type


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1522:tp1.Mix.notCohoused.CI.E02.SI14.16C.C4

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:small intestine

characteristic: body habitat

text: UBERON:mucosa of small intestine

characteristic: body product

text: UBERON:mucosa of small intestine

characteristic: body site

characteristic: collection date

text: human gut metagenome

characteristic: common name

characteristic: depth

text: CultureInitiativeExperiment.BattleRoyale

characteristic: description

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:organic material feature

characteristic: env matter

text: wild-type

characteristic: genotype

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: Mus musculus

characteristic: host common name

characteristic: host subject id

text: human gut metagenome

text: n

text: human gut metagenome

characteristic: sex

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1523:tp4.Lean.DTFD.E02.SI15.C.PM76

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:small intestine

characteristic: body habitat

text: UBERON:mucosa of small intestine

characteristic: body product

text: UBERON:mucosa of small intestine

text: mouse gut metagenome

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: donor

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:organic material feature

text: wild-type

text: GAZ:United States of America

text: mouse

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: mouse gut metagenome

characteristic: organism

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: mouse gut metagenome

characteristic: taxon id


E-MTAB-1720:XS+NS B

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Edinburgh

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-1720:XS+NS B

tag: Namespace:University of Edinburgh

text: ArrayExpress

characteristic: broker name

text: Protocols: Candida albicans (strain CAI4-CIp10) was grown in YPD-T (Tris buffered YPD: 2% w/v glucose, 2% w/v mycological peptone, 1% w/v yeast extract, 100 mM Tris.HCl, pH 7.4) to mid-exponential phase Cultures were split and exposed to stresses in fresh medium at an OD600 of 0.2. Biological triplicate cultures were processed After 10 min cells were flash frozen in liquid nitrogen and RNA was extracted using Qiazol (phenol/chloroform method). RNA was DNase treated using Ambion Turbo DNAfree kit before being sent for library preparation and sequencing. Libraries were prepared using standard Illumina RNAseq library preparation kit.

characteristic: description

text: ura3::imm434/ura3::imm434 + CIp28

characteristic: genotype

text: Candida albicans

text: Candida albicans

text: Candida albicans

text: frozen specimen

characteristic: specimen with known storage state

characteristic: strain

text: XS+NS B

characteristic: title


text: CCME-COLORADO

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1522:tp1.Lean.Cohoused.CI.E02.1dpc.D1

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: human gut metagenome

characteristic: common name

characteristic: depth

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: wild-type

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: Mus musculus

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: human gut metagenome

characteristic: organism

text: n

text: human gut metagenome

characteristic: sex


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: WUSL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Low fat high plant polysacharides

text: host associated

characteristic: environment (biome)

text: gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: house mouse

text: metagenome

characteristic: investigation type

text: mouse gut metagenome

characteristic: project name

text: mouse gut metagenome

text: 454 FLX titanium

characteristic: sequencing method

text: Mouse fecal sample for VLP-purification and 454 Sequencing

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

text: public

text: qiime_study_1522:tp1.CI.E03.17dpc.2Ln54.7

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: human gut metagenome

characteristic: common name

characteristic: depth

characteristic: description

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: wild-type

characteristic: genotype

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: Mus musculus

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: human gut metagenome

characteristic: organism

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: human gut metagenome

characteristic: sex

characteristic: taxon id


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1523:tp4.Lean.DTFD.E02.7dpc.PM86

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: mouse gut metagenome

characteristic: common name

characteristic: depth

text: DTFD Monozygotic Discordant Twins

characteristic: description

text: DTFD Monozygotic Discordant Twins

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: donor

characteristic: elevation

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:feces

text: wild-type

text: GAZ:United States of America

text: mouse

text: mouse gut metagenome

text: n

text: mouse gut metagenome

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Input

text: n

text: Human fecal

text: UBERON:feces

text: UBERON:feces

text: feacl samples from human donors discordant for obesity

text: ENVO:human-associated habitat

characteristic: env biome

text: ENVO:human-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: gut metagenome

characteristic: organism

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: gut metagenome

text: Titanium

characteristic: sequencing technology

characteristic: taxon id

text: Cecal micro biome of mice humanized with the uncultured and cultured microbiota from twins discordant for obesity


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1523:tp4.Lean.DTFD.E02.SI5.PM75

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:small intestine

characteristic: body habitat

text: UBERON:mucosa of small intestine

characteristic: body product

text: UBERON:mucosa of small intestine

characteristic: body site

characteristic: collection date

text: mouse gut metagenome

characteristic: common name

characteristic: depth

text: ALG redos TSDC 7&8

characteristic: description

text: ALG redos TSDC 7&8

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: donor

characteristic: elevation

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:organic material feature

text: wild-type

characteristic: genotype

text: GAZ:United States of America

text: mouse

characteristic: host common name

text: mouse gut metagenome

text: n

text: mouse gut metagenome

characteristic: sex

characteristic: title

text: Cultured gut bacterial consortia from twins discordant for obesity modulate adiposity in gnotobiotic mice


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

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text: UBERON:sebum

text: UBERON:skin of back

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text: Pseudacris regilla_from_site_No Talk

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text: ENVO:animal-associated habitat

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text: GAZ:United States of America

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text: Pseudacris regilla

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characteristic: ENA-CHECKLIST

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characteristic: External Id

text: GIST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: uncultured bacterium

text: uncultured bacterium

characteristic: title


text: CCME-COLORADO

text: public

characteristic: altitude

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text: y

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text: mouse gut metagenome

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text: metatranscriptome of humanized mice

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text: ENVO:animal-associated habitat

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text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:feces

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characteristic: geographic location (country and/or sea)

text: laboratory mouse

characteristic: host common name

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characteristic: longitude

text: mouse gut metagenome

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text: n

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text: 0.1, g

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characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

characteristic: INSDC status

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characteristic: Submitter Id

characteristic: altitude

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text: y

text: UBERON:feces

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text: UBERON:feces

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text: UBERON:feces

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text: ENVO:feces

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characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

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characteristic: External Id

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text: house mouse

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text: human gut metagenome

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characteristic: title


characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

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text: public

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text: human gut metagenome

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text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1522:tp1.Obese.DTFD.E03.SI15.PM93

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characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:small intestine

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text: UBERON:mucosa of small intestine

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text: human gut metagenome

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text: LowFat-RichinPlantPolysaccharide Chow

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text: ENVO:organic material feature

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characteristic: INSDC center name

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text: public

text: Adult

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text: n

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text: UBERON:sebum

text: UBERON:skin of back

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text: ENVO:animal-associated habitat

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text: ENVO:animal-associated habitat

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text: ENVO:sebum

characteristic: env matter

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: Cascades Frog

text: Rana cascadae

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text: Raca

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text: organismal metagenomes

text: Trinity

characteristic: park

text: Declining

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text: The amphibian skin microbiome across species, space and life history stages

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characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

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text: CCME-COLORADO

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characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1522:tp1.CI.E08.LoSFHiFV.2dpc.Ob.A13

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

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text: UBERON:feces

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text: UBERON:feces

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text: human gut metagenome

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text: Mice_colonized_with_samples_from_discordant_twins_forobeseity

characteristic: description

text: LoSFHiFV

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characteristic: elevation

text: ENVO:animal-associated habitat

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characteristic: env feature

text: ENVO:feces

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text: wild-type

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text: GAZ:United States of America

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text: Mus musculus

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text: human gut metagenome

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text: n

text: human gut metagenome

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text: CCME-COLORADO

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text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1522:tp2.Lean.K02.LoSFHiFV.5dpc.A7

characteristic: Submitter Id

characteristic: altitude

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text: y

text: UBERON:feces

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text: UBERON:feces

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text: UBERON:feces

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text: ENVO:animal-associated habitat

text: ENVO:feces

text: wild-type

text: GAZ:United States of America

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characteristic: latitude

characteristic: longitude

text: human gut metagenome

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text: human gut metagenome

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characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Hayden, IA

text: n

characteristic: collection date

text: soil metagenome

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text: NTP21, Hayden, IA

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text: NTP21, Hayden, IA

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text: ENVO:temperate grasslands

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text: ENVO:soil

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text: y

characteristic: extracted DNA avail now

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: soil metagenome

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text: y

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text: y

text: CIRES

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text: CCME-COLORADO

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text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1522:tp1.CI.E08.LoSFHiFV.4dpc.Ob.A1

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

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text: UBERON:feces

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text: human gut metagenome

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text: ENVO:animal-associated habitat

text: ENVO:feces

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characteristic: longitude

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text: CCME-COLORADO

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text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1522:tp1.Mix.notCohoused.CI.E02.8dpc.C3

characteristic: Submitter Id

characteristic: altitude

text: y

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

characteristic: collection date

text: human gut metagenome

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text: CultureInitiativeExperiment.BattleRoyale

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text: LowFat-RichinPlantPolysaccharide Chow

characteristic: elevation

text: ENVO:animal-associated habitat

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text: ENVO:animal-associated habitat

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text: ENVO:feces

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text: wild-type

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: Mus musculus

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characteristic: organism

text: n

text: human gut metagenome

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: qiime_study_1523:tp1.Lean.DTFD.E01.Colon1.C.PM63

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text: y

text: UBERON:colon

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text: UBERON:colonic mucosa

characteristic: body product

text: UBERON:colonic mucosa

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text: mouse gut metagenome

text: alg SAMPLES FOR TWIN 16_17. cecum1.C sequenced with time course

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: donor

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:organic material feature

text: wild-type

characteristic: genotype

text: GAZ:United States of America

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characteristic: host common name

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characteristic: longitude

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text: CCME-COLORADO

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characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1522:tp1.Obese.notCohoused.CI.E02.SI14.16C.A6

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:small intestine

text: UBERON:mucosa of small intestine

text: UBERON:mucosa of small intestine

characteristic: collection date

text: human gut metagenome

characteristic: common name

characteristic: depth

characteristic: description

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: elevation

text: ENVO:animal-associated habitat

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text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:organic material feature

characteristic: env matter

text: wild-type

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: Mus musculus

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characteristic: organism

text: n

text: human gut metagenome

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

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characteristic: INSDC last update

text: public

text: qiime_study_1522:tp2.Lean.K02.LoSFHiFV.4dpc.A7

text: y

text: UBERON:feces

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characteristic: body product

text: UBERON:feces

characteristic: body site

text: human gut metagenome

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text: ENVO:animal-associated habitat

text: ENVO:feces

text: wild-type

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text: GAZ:United States of America

text: Mus musculus

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characteristic: latitude

characteristic: longitude

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text: CCME-COLORADO

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text: public

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characteristic: SRA accession

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characteristic: age

text: years

characteristic: age units

characteristic: altitude

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text: n

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text: UBERON:feces

text: UBERON:feces

characteristic: collection date

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text: Adequate weight female stool sample

characteristic: description

text: Adequate weight female stool sample

characteristic: elevation

text: ENVO:human-associated habitat

characteristic: env biome

text: ENVO:human-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: GAZ:Colombia

characteristic: geographic location (country and/or sea)

characteristic: height or length

text: human

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text: y

text: human gut metagenome

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text: Human gut microbiota


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1522:tp1.CI.E03.11dpc.3Ln37.9

characteristic: Submitter Id

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: human gut metagenome

text: CultureInitiativeExperiment.ArrayedInvasion

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:feces

text: wild-type

characteristic: genotype

text: GAZ:United States of America

text: Mus musculus

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characteristic: latitude

characteristic: longitude

text: human gut metagenome

text: n

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characteristic: sample id

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text: Cultured gut bacterial consortia from twins discordant for obesity modulate adiposity in gnotobiotic mice


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1523:tp4.Obese.DTFD.E02.Colon1.C.PM72

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:colon

text: UBERON:colonic mucosa

text: UBERON:colonic mucosa

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text: mouse gut metagenome

characteristic: common name

characteristic: depth

text: ALG samples for mice colonized with the Microbiota of co-twins discordant for obesity

characteristic: description

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: donor

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:organic material feature

characteristic: env matter

text: wild-type

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

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text: n

text: mouse gut metagenome

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: qiime_study_1523:tp4.Obese.DTFD.E02.SI13.C.PM71

characteristic: Submitter Id

text: y

text: UBERON:small intestine

characteristic: body habitat

text: UBERON:mucosa of small intestine

characteristic: body product

text: UBERON:mucosa of small intestine

characteristic: body site

text: mouse gut metagenome

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:organic material feature

text: wild-type

characteristic: genotype

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characteristic: longitude

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characteristic: sex

characteristic: taxon id


characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

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characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

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characteristic: environment (biome)

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text: feces

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: house mouse

text: metagenome

characteristic: investigation type

text: mouse gut metagenome

characteristic: organism

characteristic: project name

text: mouse gut metagenome

text: Illumina

characteristic: sequencing method

text: Mouse fecal sample for COPRO-Seq

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MSUCME

characteristic: INSDC center name

text: public

characteristic: Submitter Id

characteristic: depth

text: temperate urban

text: Pine rhizosphere

text: soil

text: soil

text: Czech Republic

characteristic: geographic location (country and/or sea,region)

text: Czech Republic

characteristic: geographic location (elevation)

text: metagenome

text: soil metagenome

text: Functional gene amplicon sequencing: Inorganic N and aromatic hydrocarbon degrading genes

text: soil metagenome

text: pyrosequencing

text: Pine rhizosphere dxnA1/dfdA1 community


text: BGI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

text: human gut

characteristic: environment (biome)

text: human-associated habitat

characteristic: environment (feature)

text: faeces

characteristic: environment (material)

text: human-gut

characteristic: environmental package

text: Denmark

text: metagenome

text: human gut metagenome

text: MetaHIT-Richness

text: human gut metagenome

text: Illumina

text: Stool sample from danish


characteristic: ENA-FIRST-PUBLIC

text: CCME-COLORADO

text: public

text: qiime_study_1522:tp1.Lean.CI.E02.Cec1.17

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:cecum

characteristic: body habitat

text: UBERON:cecum mucosa

characteristic: body product

text: UBERON:cecum mucosa

characteristic: body site

text: human gut metagenome

characteristic: common name

characteristic: description

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:organic material feature

characteristic: env matter

text: wild-type

characteristic: genotype

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: Mus musculus

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: human gut metagenome

characteristic: organism

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: human gut metagenome

characteristic: sex

characteristic: taxon id

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1522:tp1.Lean.Cohoused.CI.E02.6dpc.D2

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: human gut metagenome

characteristic: common name

characteristic: depth

characteristic: description

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

text: ENVO:feces

text: wild-type

text: GAZ:United States of America

text: Mus musculus

text: human gut metagenome

text: n

text: human gut metagenome


7B Bacteria

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IMAR-CMA

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: 7B Bacteria

text: uncultured bacterium

characteristic: organism

text: uncultured bacterium

text: 7B Bacteria

characteristic: title


text: CCME-COLORADO

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1523:tp1.Obese.DTFD.E01.SI15.PM52

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:small intestine

characteristic: body habitat

text: UBERON:mucosa of small intestine

characteristic: body product

text: UBERON:mucosa of small intestine

text: mouse gut metagenome

text: ALG redos TSDC 16 &17

text: ALG redos TSDC 16 &17

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: donor

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:organic material feature

characteristic: env matter

text: wild-type

characteristic: genotype

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: mouse

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: mouse gut metagenome

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: mouse gut metagenome

characteristic: sex

characteristic: taxon id


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1523:tp1.Obese.DTFD.E01.3dpc.PM53

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: mouse gut metagenome

characteristic: common name

characteristic: depth

text: 16s time course analysis of cecal contents collected from mice colonized with discordant twins microbiota

characteristic: description

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

text: ENVO:feces

text: wild-type

text: GAZ:United States of America

text: mouse

text: mouse gut metagenome

characteristic: organism

text: n

text: mouse gut metagenome

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HPA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ST454 (BAPS cluster 11)

text: Legionella pneumophila

text: Legionella pneumophila


text: CCME-COLORADO

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

text: Fricke Cemetery, NE

characteristic: anonymized name

text: n

text: soil metagenome

text: NTP7, Fricke Cemetery, NE

text: NTP7, Fricke Cemetery, NE

text: ENVO:temperate grasslands

text: ENVO:prairie

characteristic: env feature

text: ENVO:soil

characteristic: env matter

text: y

characteristic: extracted DNA avail now

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

characteristic: latitude

characteristic: longitude

text: soil metagenome

characteristic: ph

text: y

characteristic: physical samp avail now

text: y

characteristic: public

characteristic: sample id

text: CIRES

characteristic: sample location

characteristic: sample name

text: soil metagenome

characteristic: taxon id

text: Silt Loam

characteristic: texture


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1523:tp4.Lean.DTFD.E02.SI15.PM76

characteristic: Submitter Id

text: y

text: UBERON:small intestine

characteristic: body habitat

text: UBERON:mucosa of small intestine

characteristic: body product

text: UBERON:mucosa of small intestine

characteristic: body site

characteristic: collection date

text: mouse gut metagenome

characteristic: common name

characteristic: depth

characteristic: description

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: donor

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

text: ENVO:organic material feature

text: wild-type

characteristic: genotype

text: GAZ:United States of America

text: mouse

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: mouse gut metagenome

characteristic: organism

text: n

text: mouse gut metagenome

characteristic: sex

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1522:tp3.Obese.DTFD.E04.SI14.16.D12

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:small intestine

characteristic: body habitat

text: UBERON:mucosa of small intestine

characteristic: body product

text: UBERON:mucosa of small intestine

text: human gut metagenome

text: LowFat-RichinPlantPolysaccharide Chow

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:organic material feature

characteristic: env matter

text: wild-type

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: Mus musculus

characteristic: latitude

characteristic: longitude

text: human gut metagenome

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: human gut metagenome

characteristic: taxon id


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: qiime_study_1522:tp1.Obese.DTFD.E03.Colon1.PM92

text: y

text: UBERON:colon

text: UBERON:colonic mucosa

text: UBERON:colonic mucosa

characteristic: body site

characteristic: collection date

text: human gut metagenome

characteristic: common name

characteristic: depth

characteristic: description

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

text: ENVO:organic material feature

text: wild-type

characteristic: genotype

text: GAZ:United States of America

text: Mus musculus

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: human gut metagenome

characteristic: organism

text: n

text: human gut metagenome

characteristic: sex

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: WUSL

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Low fat high plant polysacharides

text: host associated

characteristic: environment (biome)

text: gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: house mouse

text: 6, 7

text: metagenome

characteristic: investigation type

text: mouse gut metagenome

characteristic: project name

text: mouse gut metagenome

text: 454 FLX titanium

characteristic: sequencing method

text: Mouse fecal sample for VLP-purification and 454 Sequencing


characteristic: ENA-FIRST-PUBLIC

text: CCME-COLORADO

characteristic: INSDC last update

text: public

characteristic: altitude

characteristic: anonymized name

text: y

characteristic: collection date

text: mouse gut metagenome

characteristic: common name

characteristic: depth

text: metatranscriptome of humanized mice

characteristic: description

text: metatranscriptome of humanized mice

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: laboratory mouse

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: mouse gut metagenome

characteristic: organism

text: n

characteristic: public

text: 0.1, g

characteristic: sample id

characteristic: sample name

text: mouse gut metagenome

characteristic: taxon id

characteristic: title

text: Metatranscriptome of mice humanized with the intact, unclutured or culture collection from twins discordant for obesity


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1522:tp1.CI.E08.LoSFHiFV.5dpc.Ln.B4

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: human gut metagenome

characteristic: common name

characteristic: depth

text: Mice_colonized_with_samples_from_discordant_twins_forobeseity

characteristic: description

text: LoSFHiFV

characteristic: diet

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:feces

text: wild-type

characteristic: genotype

text: GAZ:United States of America

text: Mus musculus

text: human gut metagenome

text: n

text: human gut metagenome

characteristic: sex


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: qiime_study_1523:tp4.Lean.DTFD.E02.StomachC.PM83

text: y

text: UBERON:stomach

text: UBERON:mucosa of stomach

text: UBERON:mucosa of stomach

text: mouse gut metagenome

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: donor

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:organic material feature

characteristic: env matter

text: wild-type

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: mouse

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: mouse gut metagenome

characteristic: organism

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: mouse gut metagenome

characteristic: taxon id

text: Cultured gut bacterial consortia from twins discordant for obesity modulate adiposity in gnotobiotic mice

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: n

characteristic: collection date

text: compost metagenome

characteristic: common name

characteristic: depth

text: compost sample from Manure compost control

characteristic: description

text: ENVO:cropland

text: ENVO:farm

text: ENVO:compost

text: Recipe

text: GAZ:United States of America

text: compost metagenome

text: y

text: compost metagenome

text: Riverside Farms, E. Hardwick, Vermont

characteristic: site description

text: compost microbiome

text: M

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

characteristic: lat lon

text: viral metagenome

characteristic: organism

text: viral metagenome

text: Comparison of PolB and MCP6 to study Prasinovirus diversity

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Larva

characteristic: age group

text: n

text: UBERON:skin

characteristic: body habitat

text: UBERON:sebum

characteristic: body product

text: UBERON:skin of back

characteristic: body site

text: Jordan Kueneman

characteristic: collector name

text: organismal metagenome

text: Taricha granulosa_from_site_Little Shimmy

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:sebum

characteristic: env matter

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: Newt

characteristic: host common name

text: Taricha granulosa

characteristic: host species

characteristic: host subject id

characteristic: host taxid

text: Tagr

characteristic: latitude

characteristic: longitude

text: organismal metagenomes

text: Trinity

characteristic: park

text: Declining

characteristic: ph

text: n

characteristic: public

characteristic: redox potential

text: NR

text: swab

characteristic: sample id

characteristic: sample name

text: Little Shimmy

characteristic: sample site

text: CA

characteristic: sample state

text: organismal metagenomes

characteristic: spcond

text: mS/cm

characteristic: taxon id

characteristic: temp

text: The amphibian skin microbiome across species, space and life history stages

text: dipnet

characteristic: trap type


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1523:tp1.Lean.DTFD.E03.35dpc.PM95

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: mouse gut metagenome

characteristic: common name

characteristic: depth

characteristic: description

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: donor

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: wild-type

characteristic: genotype

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: mouse

characteristic: host common name

text: mouse gut metagenome

characteristic: organism

text: n

text: mouse gut metagenome

characteristic: sex

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: WUSL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Low fat high plant polysacharides

text: host associated

characteristic: environment (biome)

text: gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: house mouse

characteristic: host subject id

characteristic: host taxid

text: metagenome

characteristic: investigation type

text: mouse gut metagenome

characteristic: project name

text: mouse gut metagenome

text: Illumina

characteristic: sequencing method

text: Mouse fecal sample for COPRO-Seq


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

text: public

text: qiime_study_1523:tp1.Obese.DTFD.E01.Colon1.C.PM59

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:colon

characteristic: body habitat

text: UBERON:colonic mucosa

characteristic: body product

text: UBERON:colonic mucosa

characteristic: body site

characteristic: collection date

text: mouse gut metagenome

characteristic: common name

characteristic: depth

text: alg SAMPLES FOR TWIN 16_17. cecum1.C sequenced with time course

characteristic: description

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: donor

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:organic material feature

characteristic: env matter

text: wild-type

characteristic: genotype

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: mouse

characteristic: host common name

characteristic: latitude

characteristic: longitude

text: mouse gut metagenome

characteristic: organism

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: mouse gut metagenome

characteristic: sex

characteristic: taxon id

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: human gut metagenome

characteristic: common name

characteristic: depth

text: CultureInitiativeExperiment.ArrayedInvasion

characteristic: description

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:feces

text: wild-type

text: GAZ:United States of America

text: Mus musculus

characteristic: host subject id

characteristic: host taxid

text: human gut metagenome

text: n

text: human gut metagenome


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: qiime_study_1522:tp1.Lean.Cohoused.CI.E02.10dpc.D1

text: y

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human gut metagenome

text: CultureInitiativeExperiment.BattleRoyale

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: wild-type

characteristic: genotype

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: Mus musculus

characteristic: host common name

characteristic: latitude

characteristic: longitude

text: human gut metagenome

characteristic: organism

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: human gut metagenome

characteristic: sex

characteristic: taxon id

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: No

text: n

characteristic: body mass index

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: cohort

characteristic: collection date

characteristic: depth

characteristic: description

text: ENVO:human-associated habitat

text: ENVO:human-associated habitat

text: ENVO:feces

text: GAZ:United States of America

text: Negative

characteristic: hiv

characteristic: host subject id

text: MiSeq

text: human gut metagenome

text: n

text: human gut metagenome

text: negative

characteristic: status

text: The bacterial composition of fecal samples in HIV negative and positive individuals


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: qiime_study_1522:tp1.Obese.Cohoused.CI.E02.3dpc.E10

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

text: UBERON:feces

text: human gut metagenome

characteristic: common name

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: wild-type

characteristic: genotype

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: Mus musculus

characteristic: host common name

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: human gut metagenome

characteristic: organism

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: human gut metagenome

characteristic: sex

characteristic: taxon id

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Adult

characteristic: age group

characteristic: altitude

characteristic: anonymized name

text: n

text: UBERON:skin

characteristic: body habitat

text: UBERON:sebum

characteristic: body product

text: UBERON:skin of back

characteristic: body site

characteristic: collection date

text: Jordan Kueneman

characteristic: collector name

text: organismal metagenome

characteristic: common name

characteristic: depth

text: Anaxyrus boreas_from_site_26186

characteristic: description

text: Anaxyrus boreas_from_site_26186

characteristic: elevation

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:sebum

text: GAZ:United States of America

text: boreal toad

text: Anaxyrus boreas

characteristic: host species

characteristic: host subject id

text: Anbo

text: organismal metagenomes

text: Trinity

characteristic: park

text: Declining

characteristic: ph

text: n

characteristic: redox potential

text: R

text: swab

characteristic: sample site

text: CA

characteristic: sample state

text: organismal metagenomes

characteristic: spcond

text: mS/cm

characteristic: temp

text: dipnet

characteristic: trap type


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Sub-adult

characteristic: age group

characteristic: altitude

characteristic: anonymized name

text: n

text: UBERON:skin

characteristic: body habitat

text: UBERON:sebum

characteristic: body product

text: UBERON:skin of back

characteristic: body site

text: Jordan Kueneman

text: organismal metagenome

text: Pseudacris regilla_from_site_Manzanita

text: Pseudacris regilla_from_site_Manzanita

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:sebum

characteristic: env matter

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: Pacific treefrog

characteristic: host common name

text: Pseudacris regilla

characteristic: host taxid

text: Psre

characteristic: latitude

characteristic: longitude

text: organismal metagenomes

characteristic: organism

text: n

characteristic: public

text: NR

text: swab

characteristic: sample id

characteristic: sample name

text: Manzanita

text: CA

text: organismal metagenomes

text: mS/cm

characteristic: taxon id

characteristic: title

text: dipnet


A1 Archaea

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IMAR-CMA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: A1 Archaea

characteristic: Submitter Id

text: uncultured archaeon

text: uncultured archaeon

text: A1 Archaea


text: CCME-COLORADO

text: public

text: qiime_study_1523:tp4.Obese.DTFD.E02.1dpc.PM80

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: mouse gut metagenome

characteristic: common name

characteristic: depth

text: DTFD Monozygotic Discordant Twins

characteristic: description

text: DTFD Monozygotic Discordant Twins

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: donor

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: wild-type

characteristic: genotype

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: mouse

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: mouse gut metagenome

text: n

text: mouse gut metagenome

characteristic: sex


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1452:fut2positive.day56.48.PSdef

characteristic: Submitter Id

characteristic: altitude

text: n

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: PSdef

characteristic: chow

text: All samples collected between Sept. 2010 and Dec. 2011

text: mouse gut metagenome

characteristic: common name

text: WT mouse fecal sample

text: WT mouse fecal sample

text: Regular chow/PS def

text: ENVO:mammalia-associated habitat

text: ENVO:mammalia-associated habitat

text: ENVO:feces

text: WT

text: GAZ:United States of America

text: mouse gut metagenome

characteristic: organism

text: n

characteristic: public

text: .1, g

characteristic: sample id

characteristic: sample name

characteristic: sampling day

text: mouse gut metagenome

characteristic: taxon id

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: anonymized name

text: n

characteristic: collection date

text: Jordan Kueneman

characteristic: collector name

text: unclassified metagenome

characteristic: depth

characteristic: description

characteristic: elevation

text: ENVO:water

characteristic: env biome

text: ENVO:fresh water

characteristic: env feature

text: ENVO:sterile water

characteristic: env matter

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: metagenomes

text: Trinity

characteristic: park

text: Declining

characteristic: ph

text: n

characteristic: redox potential

text: swab

text: Shimmy

characteristic: sample site

text: CA

characteristic: sample state

text: metagenomes

characteristic: spcond

text: mS/cm

characteristic: temp

text: dipnet

characteristic: trap type


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1522:tp3.Obese.DTFD.E04.Stool.D9

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: human gut metagenome

characteristic: common name

characteristic: depth

characteristic: description

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:feces

text: wild-type

characteristic: genotype

text: GAZ:United States of America

text: Mus musculus

characteristic: host common name

characteristic: host taxid

text: human gut metagenome

characteristic: organism

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: human gut metagenome

characteristic: sex

characteristic: taxon id

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: n

text: compost metagenome

text: compost sample from Hay compost control

text: compost sample from Hay compost control

characteristic: elevation

text: ENVO:cropland

characteristic: env biome

text: ENVO:farm

characteristic: env feature

text: ENVO:compost

characteristic: env matter

text: Recipe

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

characteristic: latitude

characteristic: longitude

text: compost metagenome

text: y

text: compost metagenome

text: Riverside Farms, E. Hardwick, Vermont

characteristic: site description

text: compost microbiome

text: H

characteristic: treatment


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

text: public

text: qiime_study_1522:tp3.Lean.DTFD.E04.2dpc.C7

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: human gut metagenome

characteristic: common name

characteristic: depth

characteristic: description

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:feces

text: wild-type

characteristic: genotype

text: GAZ:United States of America

text: Mus musculus

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: human gut metagenome

characteristic: organism

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: human gut metagenome

characteristic: sex

characteristic: taxon id

text: Cultured gut bacterial consortia from twins discordant for obesity modulate adiposity in gnotobiotic mice

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1452:fut2positive.day28.51.Regular

characteristic: Submitter Id

characteristic: altitude

text: n

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: Regular

characteristic: chow

text: mouse gut metagenome

text: WT mouse fecal sample

text: WT mouse fecal sample

text: Regular chow

characteristic: elevation

text: ENVO:mammalia-associated habitat

characteristic: env biome

text: ENVO:mammalia-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: WT

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

characteristic: latitude

characteristic: longitude

text: mouse gut metagenome

text: n

text: .1, g

characteristic: sampling day

text: mouse gut metagenome


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: qiime_study_1522:tp1.CI.E03.11dpc.2Ln54.8

characteristic: anonymized name

text: y

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

characteristic: collection date

text: human gut metagenome

characteristic: common name

characteristic: depth

characteristic: description

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:feces

text: wild-type

characteristic: genotype

text: GAZ:United States of America

text: Mus musculus

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: human gut metagenome

characteristic: organism

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: human gut metagenome

characteristic: sex

characteristic: taxon id

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1523:tp1.Obese.DTFD.E03.30dpc.PM92

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: mouse gut metagenome

text: Mice_colonized_with_samples_from_discordant_twins_forobeseity

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: donor

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: wild-type

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: mouse

characteristic: latitude

characteristic: longitude

text: mouse gut metagenome

text: n

text: mouse gut metagenome


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: qiime_study_1522:tp1.Obese.Cohoused.CI.E02.2dpc.E11

text: y

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

characteristic: collection date

text: human gut metagenome

characteristic: common name

characteristic: depth

characteristic: description

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:feces

text: wild-type

characteristic: genotype

text: GAZ:United States of America

text: Mus musculus

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: human gut metagenome

characteristic: organism

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: human gut metagenome

characteristic: sex

characteristic: taxon id

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: WUSL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Low fat high plant polysacharides

text: host associated

characteristic: environment (biome)

text: gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: house mouse

text: metagenome

characteristic: investigation type

text: mouse gut metagenome

characteristic: project name

text: mouse gut metagenome

text: Illumina

characteristic: sequencing method

text: Mouse fecal sample for COPRO-Seq


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CCME-COLORADO

text: public

text: qiime_study_1523:tp1.Lean.DTFD.E01.15dpc.PM64

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: mouse gut metagenome

characteristic: common name

characteristic: depth

text: 16s time course analysis of fecal pellets collected from mice colonized with discordant twins microbiota

characteristic: description

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: donor

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: wild-type

characteristic: genotype

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: mouse

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: mouse gut metagenome

characteristic: organism

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: mouse gut metagenome

characteristic: sex

characteristic: taxon id

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Sub-adult

characteristic: age group

characteristic: altitude

characteristic: anonymized name

text: n

text: UBERON:skin

characteristic: body habitat

text: UBERON:sebum

characteristic: body product

text: UBERON:skin of back

characteristic: body site

characteristic: collection date

text: Jordan Kueneman

characteristic: collector name

text: organismal metagenome

characteristic: common name

characteristic: depth

text: Rana cascadae_from_site_Found

characteristic: description

text: Rana cascadae_from_site_Found

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

text: ENVO:sebum

text: GAZ:United States of America

text: Cascades Frog

text: Rana cascadae

characteristic: host species

text: Raca

text: organismal metagenomes

text: Trinity

characteristic: park

text: Persisiting

characteristic: ph

text: n

characteristic: redox potential

text: swab

text: Found

characteristic: sample site

text: CA

characteristic: sample state

text: organismal metagenomes

characteristic: spcond

text: mS/cm

characteristic: temp

text: The amphibian skin microbiome across species, space and life history stages

text: dipnet

characteristic: trap type