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text: Midgut transcriptome of adult D. fasciatus with and without vitamin-supplementing symbionts, respectively. Symbionts were removed through egg-surface sterilization. After isolation of total RNA and subsequent rRNA depletion, mRNA was subjected to a polyA separation strategy, and polyA-enriched and -depleted fractions were sequenced separately.

text: Adult

text: Dysdercus fasciatus

text: Dysdercus fasciatus

text: Dysdercus fasciatus midgut transcriptome

type: has member


text: Imperial College

text: public

tag: Namespace:Imperial College

text: ArrayExpress

characteristic: broker name

text: Protocols: M. tuberculosis H37Rv delta-glnR were used in this study. M. tuberculosis was grown aerobically in Middlebrook 7H9 liquid broth (supplemented with 0.2% glycerol, 0.025% Tyloxapol and 10% OADC) at 37degrees C, 100 rpm. Optimised nitrogen limiting conditions have been described {Behrends:2012dw, Jenkins:2012jh}. Briefly, a 10 day culture of M. tuberculosis was washed twice in nitrogen free Sauton's medium (0.05% (w/v) KH2PO4, 0.05% (w/v) MgSO4, 0.2% (w/v) citric acid, 0.005% (w/v) ferric citrate, 0.2% (v/v) glycerol, 0.0001% (v/v) ZnSO4, 0.015% (v/v) Tyloxapol) and inoculated into Sauton's nitrogen free medium, supplemented with 1 mM (nitrogen limiting) ammonium chloride (Ultra pure; Sigma) to a starting OD60nm0 of 0.04. Growth was monitored by OD600nm. Ammonium ions in the culture supernatant were quantified using an AquaQuant Ammonium detection kit (Merck). The M. tuberculosis delta-glnR mutant was constructed by a recombineering approach as previously described {vanKessel:2007hv} replacing the entire glnR gene with a hygromycin resistance cassette {Jenkins:2012jh}. Primers used to amplify the flanking regions and to confirm mutant construction are given in Table S1. Successful construction of the mutant was confirmed by flanking PCR and Western analysis for the GlnR protein using a GlnR specific antibody previously described {Jenkins:2013gh} Purified rabbit anti-GlnR polyclonal antibody was added to the sonicated cell extract and incubated overnight at 4 degrees C. Sheep anti-rabbit IgG Dynal beads (Invitrogen) were prepared by washing 2x PBS and 2x IP buffer, before bead saturation overnight in blocking solution (IP buffer, EDTA-free protease inhibitor tablet, 1 mg/ml BSA). Blocking solution was removed and bead-sonicated sample complex incubated for 3 hours at 4 degrees C. To harvest the bead-antibody-DNA complex a magnet was used. The complex was then subject to a series of washing steps; 2x IP buffer, IP buffer plus 500 mM NaCl, wash II (10 mM Tris pH 8, 250 mM LiCl, 1 mM EDTA, 0.5% Nonidet-P40, 0.5% (w/v) Na deoxycholate), TE buffer (50 mM Tris, 10 mM EDTA pH 7.5). Elution of DNA was performed by addition of elution buffer (50 mM Tris.HCl pH 7.5, 10 mM EDTA, 1% (w/v) SDS) and incubation at 65 degrees C for 40 min. Beads were separated by magnetism and the supernatant harvested. Elucidate was diluted 2-fold in nuclease free H2O (Qiagen), followed by protein degradation with the addition of 4 mg/ml Pronase and incubated: 42 degrees C for 2 hours and 65 degrees C for 6 hours. DNA was subsequently purified using the Qiagen MiniElute kit and DNA quantified using the dsDNA Qubit (Invitrogen). DNA was prepared for next generation sequencing using the Illumina ChIP-seq DNA sample preparation kit according to the manufacturer's protocol, with the addition of a second gel extraction step after PCR amplification, to remove excess primer dimers. DNA size and purity was confirmed by DNA Bioanalyser (Agilent).

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: delta-glnR

characteristic: phenotype

text: Mycobacterium tuberculosis

text: H37Rv (ATCC 27294)

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Imperial College

text: public

text: ArrayExpress

text: Protocols: M. tuberculosis H37Rv delta-glnR were used in this study. M. tuberculosis was grown aerobically in Middlebrook 7H9 liquid broth (supplemented with 0.2% glycerol, 0.025% Tyloxapol and 10% OADC) at 37degrees C, 100 rpm. Optimised nitrogen limiting conditions have been described {Behrends:2012dw, Jenkins:2012jh}. Briefly, a 10 day culture of M. tuberculosis was washed twice in nitrogen free Sauton's medium (0.05% (w/v) KH2PO4, 0.05% (w/v) MgSO4, 0.2% (w/v) citric acid, 0.005% (w/v) ferric citrate, 0.2% (v/v) glycerol, 0.0001% (v/v) ZnSO4, 0.015% (v/v) Tyloxapol) and inoculated into Sauton's nitrogen free medium, supplemented with 30 mM (nitrogen excess) ammonium chloride (Ultra pure; Sigma) to a starting OD60nm0 of 0.04. Growth was monitored by OD600nm. Ammonium ions in the culture supernatant were quantified using an AquaQuant Ammonium detection kit (Merck). The M. tuberculosis delta-glnR mutant was constructed by a recombineering approach as previously described {vanKessel:2007hv} replacing the entire glnR gene with a hygromycin resistance cassette {Jenkins:2012jh}. Primers used to amplify the flanking regions and to confirm mutant construction are given in Table S1. Successful construction of the mutant was confirmed by flanking PCR and Western analysis for the GlnR protein using a GlnR specific antibody previously described {Jenkins:2013gh} Purified rabbit anti-GlnR polyclonal antibody was added to the sonicated cell extract and incubated overnight at 4 degrees C. Sheep anti-rabbit IgG Dynal beads (Invitrogen) were prepared by washing 2x PBS and 2x IP buffer, before bead saturation overnight in blocking solution (IP buffer, EDTA-free protease inhibitor tablet, 1 mg/ml BSA). Blocking solution was removed and bead-sonicated sample complex incubated for 3 hours at 4 degrees C. To harvest the bead-antibody-DNA complex a magnet was used. The complex was then subject to a series of washing steps; 2x IP buffer, IP buffer plus 500 mM NaCl, wash II (10 mM Tris pH 8, 250 mM LiCl, 1 mM EDTA, 0.5% Nonidet-P40, 0.5% (w/v) Na deoxycholate), TE buffer (50 mM Tris, 10 mM EDTA pH 7.5). Elution of DNA was performed by addition of elution buffer (50 mM Tris.HCl pH 7.5, 10 mM EDTA, 1% (w/v) SDS) and incubation at 65 degrees C for 40 min. Beads were separated by magnetism and the supernatant harvested. Elucidate was diluted 2-fold in nuclease free H2O (Qiagen), followed by protein degradation with the addition of 4 mg/ml Pronase and incubated: 42 degrees C for 2 hours and 65 degrees C for 6 hours. DNA was subsequently purified using the Qiagen MiniElute kit and DNA quantified using the dsDNA Qubit (Invitrogen). DNA was prepared for next generation sequencing using the Illumina ChIP-seq DNA sample preparation kit according to the manufacturer's protocol, with the addition of a second gel extraction step after PCR amplification, to remove excess primer dimers. DNA size and purity was confirmed by DNA Bioanalyser (Agilent).

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: delta-glnR

text: Mycobacterium tuberculosis

text: H37Rv (ATCC 27294)


characteristic: External Id

text: IBET/ITQB

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: June - November 2009

text: cork oak acorns at developmental stage S1

text: Portugal

characteristic: geographic location (country and/or sea)

text: Quercus suber

text: Quercus suber

text: fruit


text: IBET/ITQB

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characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: June - November 2009

text: cork oak acorns at developmental stage S2

text: Portugal

text: Quercus suber

text: Quercus suber

text: fruit


text: IBET/ITQB

text: public

text: June - November 2009

text: cork oak acorns at developmental stages S3 and S4

characteristic: description

text: S3 and S4

text: Portugal

text: Quercus suber

characteristic: organism

text: Quercus suber

text: fruit


text: IBET/ITQB

text: public

text: June - November 2009

text: cork oak acorns at developmental stage S5

text: Portugal

text: Quercus suber

text: Quercus suber

text: fruit

characteristic: title


text: IBET/ITQB

text: public

text: June - November 2009

text: cork oak acorns at developmental stage S8

text: Portugal

text: Quercus suber

text: Quercus suber

text: fruit


FR

text: IBET/ITQB

text: public

text: FR

text: June - November 2009

text: Pool of cork oak acorns from developmental stage S1 to S8

text: S1 to S8

text: Portugal

text: Quercus suber

text: Quercus suber

text: fruit

text: FR


EM

text: IBET/ITQB

text: public

text: EM

text: June - November 2009

text: Pool of embryos extracted from cork oak acorns in developmental stages S1 to S8

text: S1 to S8

text: Portugal

text: Quercus suber

text: Quercus suber

text: embryos

text: EM


text: UPPSALA UNIVERSITET

text: public

tag: Namespace:UPPSALA UNIVERSITET

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens


text: ARO

text: public

text: Mozambique tilapia

text: transcriptome analysis of anterior intestine,Mozambique tilapia in freshwater

text: Oreochromis mossambicus

text: Oreochromis mossambicus

text: AMF


text: ARO

text: public

text: Mozambique tilapia

text: transcriptome analysis of anterior intestine,Mozambique tilapia in seawater

text: Oreochromis mossambicus

text: Oreochromis mossambicus

text: AMS


text: ARO

text: public

text: Mozambique tilapia

text: transcriptome analysis of posterior intestine,Mozambique tilapia in freshwater

text: Oreochromis mossambicus

text: Oreochromis mossambicus

text: PMF


text: ARO

text: public

text: Mozambique tilapia

text: transcriptome analysis of posterior intestine,Mozambique tilapia in seawater

text: Oreochromis mossambicus

text: Oreochromis mossambicus

text: PMS


text: ARO

text: public

text: Nile tilapia

text: transcriptome analysis of anterior intestine,Nile tilapia in freshwater

text: Oreochromis niloticus

text: Oreochromis niloticus

text: ANF


text: ARO

text: public

text: Nile tilapia

text: transcriptome analysis of anterior intestine,Nile tilapia in seawater

text: Oreochromis niloticus

text: Oreochromis niloticus

text: ANS


text: ARO

text: public

text: Nile tilapia

text: transcriptome analysis of posterior intestine,Nile tilapia in freshwater

text: Oreochromis niloticus

text: Oreochromis niloticus

text: PNF


text: ARO

text: public

text: Nile tilapia

text: transcriptome analysis of posterior intestine,Nile tilapia in seawater

text: Oreochromis niloticus

text: Oreochromis niloticus

text: PNS


text: IMSB

text: public

text: May 23, 2012

text: apple

text: McIntosh

characteristic: cultivar

text: one young, fully developed leaf of a McIntosh tree

text: young

text: Germany

text: Malus domestica

text: Malus domestica

text: leaf


text: IMSB

text: public

text: May 6, 2012

text: apple

text: McIntosh Wijcik

text: one young, fully developed leaf of a McIntosh Wijcik tree

text: young

text: Germany

text: Malus domestica

text: Malus domestica

text: leaf


text: IMSB

text: public

text: apple

text: mother Procats28, father unknown

text: tip of about one 3cm long non-columnar radicle

text: young radicle

characteristic: dev stage

text: Malus domestica

text: Malus domestica

text: primary root

characteristic: tissue type


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: IMSB

text: public

text: apple

text: mother Procats28, father unknown

text: tip of about one 3cm long heterozygous columnar radicle

text: young radicle

text: Malus domestica

text: Malus domestica

text: primary root


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IMSB

text: public

text: apple

text: mother Procats28, father unknown

text: tip of about one 3cm long homozygous columnar radicle

text: young radicle

text: Malus domestica

text: Malus domestica

text: primary root


text: IMSB

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: apple

text: mother Procats28, father unknown

text: tips of three pooled about one 3cm long non-columnar radicles

text: young radicle

text: Malus domestica

text: Malus domestica

text: primary root


text: IMSB

characteristic: INSDC last update

text: public

text: apple

text: mother Procats28, father unknown

text: tips of three pooled about one 3cm long heterozygous columnar radicles

text: young radicle

text: Malus domestica

text: Malus domestica

text: primary root


text: IMSB

text: public

characteristic: INSDC status

text: apple

text: mother Procats28, father unknown

text: tips of three pooled about one 3cm long homozygous columnar radicles

text: young radicle

text: Malus domestica

text: Malus domestica

text: primary root


text: SLU

text: public

characteristic: SRA accession

text: Serratia isolate only

text: Sweden

characteristic: geographic location (country and/or sea)

text: Serratia plymuthica S13

text: Serratia plymuthica S13


text: SLU

text: public

characteristic: Submitter Id

text: Serratia isolate interaction

characteristic: description

text: Sweden

text: Serratia plymuthica S13

text: Serratia plymuthica S13


text: DTU-GE

text: public

text: missing

text: The Netherlands

text: missing

characteristic: geographic location (latitude)

text: missing

characteristic: geographic location (longitude)

characteristic: isolate

text: Staphylococcus aureus

characteristic: organism

text: Staphylococcus aureus

text: missing

characteristic: serovar

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GIS

text: public

text: Vietnam

text: Human

characteristic: host

text: Nasopharyngeal Swabs

characteristic: isolation source

text: Human respiratory syncytial virus

text: Human respiratory syncytial virus

text: A

characteristic: serotype

text: Human RSV A

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GIS

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Vietnam

text: Human

text: Blood

text: Human respiratory syncytial virus

text: Human respiratory syncytial virus

text: A

text: Human RSV A


text: GIS

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Vietnam

characteristic: geographic location (country and/or sea)

text: Human

text: Nasopharyngeal Swabs

text: Human respiratory syncytial virus

text: Human respiratory syncytial virus

text: B

text: HRSV-B


text: IPK-Gatersleben

text: public

text: rye

characteristic: common name

text: Secale cereale

characteristic: organism

text: Secale cereale


S.lycopersicum (cv M82) -(i)

characteristic: ENA-CHECKLIST

text: INTA

text: public

text: S.lycopersicum (cv M82) -(i)

text: tomato

text: Solanum lycopersicum

text: Solanum lycopersicum

text: tomato ripe fruits


S.lycopersicum (cv M82) -(ii)

characteristic: ENA-FIRST-PUBLIC

text: INTA

text: public

text: S.lycopersicum (cv M82) -(ii)

text: tomato

text: Solanum lycopersicum

text: Solanum lycopersicum

text: tomato ripe fruits


IL9-2-6-1 (i)

text: INTA

text: public

text: IL9-2-6-1 (i)

text: tomato

text: Solanum lycopersicum

text: Solanum lycopersicum

text: tomato ripe fruits


IL9-2-6-1 (ii)

text: INTA

text: public

text: IL9-2-6-1 (ii)

text: tomato

text: Solanum lycopersicum

text: Solanum lycopersicum

text: tomato ripe fruits


S.pennellii (LA716)

text: INTA

text: public

text: S.pennellii (LA716)

text: tomato

text: Solanum lycopersicum

text: Solanum lycopersicum

text: tomato ripe fruits


S.lycopersicum (cv M82) revertant -(i)

text: INTA

text: public

text: S.lycopersicum (cv M82) revertant -(i)

text: tomato

text: Solanum lycopersicum

text: Solanum lycopersicum

text: tomato ripe fruits


S.lycopersicum (cv M82) revertant -(ii)

text: INTA

text: public

text: S.lycopersicum (cv M82) revertant -(ii)

text: tomato

text: Solanum lycopersicum

text: Solanum lycopersicum

text: tomato ripe fruits


S. pennellii

text: INTA

text: public

text: S. pennellii

text: Solanum pennellii

text: Solanum pennellii

text: siRNA from ripe tomato fruits


S. lycopersicum (cv M82) - rep1

text: INTA

text: public

text: S. lycopersicum (cv M82) - rep1

text: tomato

text: Solanum lycopersicum

text: Solanum lycopersicum

text: siRNa from tomato ripe fruits


S. lycopersicum (cv M82) - rep2

text: INTA

text: public

text: S. lycopersicum (cv M82) - rep2

text: tomato

text: Solanum lycopersicum

text: Solanum lycopersicum

text: siRNa from tomato ripe fruits


IL9-2-6-1 - rep1

text: INTA

text: public

text: IL9-2-6-1 - rep1

text: tomato

text: Solanum lycopersicum

text: Solanum lycopersicum

text: siRNa from tomato ripe fruits


IL9-2-6-1 - rep2

text: INTA

text: public

text: IL9-2-6-1 - rep2

text: tomato

text: Solanum lycopersicum

text: Solanum lycopersicum

text: siRNa from tomato ripe fruits


name: S. lycopersicum (cv M82) revertant - rep1

text: INTA

text: public

text: tomato

text: Solanum lycopersicum

text: Solanum lycopersicum

text: siRNa from tomato ripe fruits


name: S. lycopersicum (cv M82) revertant - rep2

text: INTA

text: public

text: tomato

text: Solanum lycopersicum

text: Solanum lycopersicum

text: siRNa from tomato ripe fruits


text: UNIVERSITY OF CALIFORNIA AT DAVIS

text: public

tag: Namespace:UNIVERSITY OF CALIFORNIA AT DAVIS

text: Synergistes jonesii

text: Synergistes jonesii

text: Draft Genome Sequence of Synergistes jonesii 78-1, ATCC 49833


Lgr5 KI Mouse 2 subclone A verification

text: NIOB

text: public

text: Lgr5 KI Mouse 2 subclone A verification

text: house mouse

text: Mus musculus

text: Mus musculus

text: Lgr5 KI Mouse 2 subclone A verification


Lgr5 KI Mouse 2 subclone B verification

text: NIOB

text: public

text: Lgr5 KI Mouse 2 subclone B verification

text: house mouse

text: Mus musculus

text: Mus musculus

text: Lgr5 KI Mouse 2 subclone B verification


Lgr5 KI Mouse 2 subclone C verification

text: NIOB

text: public

text: Lgr5 KI Mouse 2 subclone C verification

text: house mouse

text: Mus musculus

text: Mus musculus

text: Lgr5 KI Mouse 2 subclone C verification


text: ROSLIN

text: public

text: sheep

text: Texel male sheep Animal#20118011

characteristic: description

text: Ovis aries

text: Ovis aries

text: Texel male sheep


Texel-MP

text: ROSLIN

text: public

text: Texel-MP

text: sheep

text: Texel male sheep Animal#20118011

text: Ovis aries

text: Ovis aries

text: Texel male sheep


text: COPENHAGEN UNIVERSITY

text: public

tag: Namespace:COPENHAGEN UNIVERSITY

text: human

text: dsfgsdffg

text: Homo sapiens

text: Homo sapiens

text: sdfgsdfg


Rickettsia

text: URMITE

text: public

text: Rickettsia

text: Rickettsia aeschlimannii

text: Rickettsia aeschlimannii

text: Rickettsia aeschlimannii contigs


text: Institut Forel, University of Geneva

text: public

tag: Namespace:Institut Forel, University of Geneva

text: ArrayExpress

characteristic: broker name

text: Protocols: Elodea nuttallii were grown in 25-L aquariums supplemented with a layer of sediment in a 16/8 h light/dark cycle at 20 degrees C. 3 shoots per treatment were cut and exposed in 1-L PE beakers to 0 (control), 20, 200 2000, 20000 or 200000 ng/L HgCl2, 10, 100, 1000 or 10000 ng/L methyl-Hg, or 10-6 M CuCl2 for 24 h, or to 51 uW/cm2 UV-B radiation for 6 h. Double exposures were conducted for UV-B with 200 or 200000 ng/L HgCl2. All treatments except 20 and 20000 ng/L HgCL2, 10, 100 and 1000 ng/L methyl-Hg and 10-6 M Cu were run in biological triplicate. Shoots were ground in liquid nitrogen and RNA was extracted using Trizol reagent. Libraries were constructed at Fasteris SA (Geneva, CH) using the Illumina TruSeq stranded mRNA kit according to the manufacturer's instructions. Briefly, mRNA was purified and fragmented, and subsequently first and second cDNA strands were synthesised. Finally, after adapter ligation, libraries were PCR amplified and quality checked.

text: Elodea nuttallii

text: Elodea nuttallii

text: shoot

characteristic: organism part

text: Elodea nuttallii

text: frozen specimen

characteristic: specimen with known storage state


characteristic: ENA-LAST-UPDATE

text: Institut Forel, University of Geneva

text: public

text: ArrayExpress

text: Protocols: Elodea nuttallii were grown in 25-L aquariums supplemented with a layer of sediment in a 16/8 h light/dark cycle at 20 degrees C. 3 shoots per treatment were cut and exposed in 1-L PE beakers to 0 (control), 20, 200 2000, 20000 or 200000 ng/L HgCl2, 10, 100, 1000 or 10000 ng/L methyl-Hg, or 10^-6 M CuCl2 for 24 h, or to 51 uW/cm2 UV-B radiation for 6 h. Double exposures were conducted for UV-B with 200 or 200000 ng/L HgCl2. All treatments except 20 and 20000 ng/L HgCL2, 10, 100 and 1000 ng/L methyl-Hg and 10^-6 M Cu were run in biological triplicate. Shoots were ground in liquid nitrogen and RNA was extracted using Trizol reagent. Libraries were constructed at Fasteris SA (Geneva, CH) using the Illumina TruSeq stranded mRNA kit according to the manufacturer's instructions. Briefly, mRNA was purified and fragmented, and subsequently first and second cDNA strands were synthesised. Finally, after adapter ligation, libraries were PCR amplified and quality checked.

text: Elodea nuttallii

text: Elodea nuttallii

text: shoot

text: Elodea nuttallii

text: frozen specimen

characteristic: title


characteristic: External Id

text: Insititute of Agrobiotecnology

characteristic: INSDC center name

text: public

text: Escherichia coli BW25113 K-12 derivative

text: Escherichia coli

text: Escherichia coli


text: MPIMG

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Acholeplasma oculi

text: Acholeplasma oculi

text: Genome determination of Acholeplasma oculi 19L


text: UPPSALA UNIVERSITET

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Xeromyces bisporus strain FRR 0525 in culture

text: Xeromyces bisporus

text: Xeromyces bisporus

text: FRR 0525

characteristic: strain

text: Xeromyces bisporus strain FRR 0525


Rickettsia aeschlimannii MC16

text: URMITE

text: public

text: Rickettsia aeschlimannii MC16

characteristic: Submitter Id

text: Rickettsia aeschlimannii

text: Rickettsia aeschlimannii

text: Rickettsia aeschlimannii MC16 plasmid


text: UNIVERSIDAD COMPLUTENSE DE MADRID

text: public

tag: Namespace:UNIVERSIDAD COMPLUTENSE DE MADRID

text: bile

text: pig

characteristic: common name

text: pig

characteristic: host

text: Sus scrofa

characteristic: organism

text: Sus scrofa

text: female

characteristic: sex

text: gall bladder

text: Bile content of gall bladder from sow 2


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSIDAD COMPLUTENSE DE MADRID

text: public

text: bile

text: pig

text: pig

text: Sus scrofa

text: Sus scrofa

text: female

text: gall bladder

text: Bile content of gall bladder from sow 3


text: UNIVERSIDAD COMPLUTENSE DE MADRID

text: public

text: mucus

text: pig

text: pig

text: Sus scrofa

text: Sus scrofa

text: female

text: gall bladder

text: Mucus layer of gall bladder from sow 3


text: UNIVERSIDAD COMPLUTENSE DE MADRID

text: public

text: bile

text: pig

text: pig

text: Sus scrofa

text: Sus scrofa

text: female

text: gall bladder

text: Bile content of gall bladder from sow 4


text: UNIVERSIDAD COMPLUTENSE DE MADRID

text: public

text: mucus

text: pig

text: pig

text: Sus scrofa

text: Sus scrofa

text: female

text: gall bladder

text: Mucus layer of gall bladder from sow 4


text: UNIVERSIDAD COMPLUTENSE DE MADRID

text: public

text: bile

text: pig

text: pig

text: Sus scrofa

text: Sus scrofa

text: female

text: gall bladder

text: Bile content of gall bladder from sow 5


text: UW MADISON

text: public

tag: Namespace:UW MADISON

text: Xenorhabdus nematophila str. Websteri

text: Xenorhabdus nematophila str. Websteri

text: Websteri

text: Xenorhabdus nematophila strain


text: UW MADISON

text: public

text: Xenorhabdus nematophila AN6/1

text: Xenorhabdus nematophila AN6/1

text: Xenorhabdus nematophila strain


Rickettsia aeschlimannii contigs

text: URMITE

text: public

text: Rickettsia aeschlimannii contigs

text: Rickettsia aeschlimannii

text: Rickettsia aeschlimannii

text: Rickettsia aeschlimannii


Rickettsia aeschlimannii plasmid

text: URMITE

text: public

text: Rickettsia aeschlimannii plasmid

text: Rickettsia aeschlimannii

text: Rickettsia aeschlimannii

text: Rickettsia aeschlimannii


text: MRC Toxicology Unit, Leicester

text: public

tag: Namespace:MRC Toxicology Unit, Leicester

text: ArrayExpress

characteristic: broker name

text: sequencing library created using the standard Ion Torrent protocol Protocols: The RNA fragment pool 5' - GCAGUUGCCANNNNNNNNNN - 3' was synthesised (ThermoScientific Molecular Biology). Fragments contained both 5'phosphate and 3'hydroxyl moieties necessary for ligation. Ligation of 10 ng of RNA pool was performed with the Ion Total RNASeq kit v2 (Life Technologies), following the manufacturer's instructions.

characteristic: description

text: synthetic construct

text: synthetic construct

text: synthetic construct

text: standard


text: 34414415; 34461978; 35780211

characteristic: ENA-LAST-UPDATE

text: FZB

text: public

text: SWZ

text: Mycobacterium

characteristic: genus

characteristic: isolate

text: Mycobacterium tuberculosis complex bacterium

text: M. tuberculosis

characteristic: species

text: WGS of MTBC isolates

characteristic: title

type: AMR curated data - CABBAGE

value: rifampin

value: susceptible

value: Mycobacterium tuberculosis

value: isoniazid

value: resistant

value: ethambutol

value: pyrazinamide


text: 34414415; 34461978; 35780211

characteristic: External Id

text: FZB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

text: Mycobacterium

text: Mycobacterium tuberculosis

text: WGS of MTBC isolates

value: streptomycin


text: 34414415; 34461978; 35780211

text: FZB

text: public

text: DEU

characteristic: SRA accession

characteristic: Submitter Id

text: Mycobacterium

text: Mycobacterium tuberculosis

text: WGS of MTBC isolates


text: FZB

text: public

characteristic: organism

text: Mycobacterium tuberculosis

text: WGS of MTBC isolates


text: 34414415; 34461978; 35780211

characteristic: ENA-CHECKLIST

text: FZB

text: public

text: DEU

text: Mycobacterium

text: Mycobacterium tuberculosis

text: WGS of MTBC isolates


text: 34414415; 34461978; 35780211

characteristic: ENA-FIRST-PUBLIC

text: FZB

text: public

text: DEU

text: Mycobacterium

text: Mycobacterium tuberculosis

text: WGS of MTBC isolates


text: 34414415; 34461978; 35780211

text: FZB

text: public

text: DEU

text: Mycobacterium

text: Mycobacterium tuberculosis

text: WGS of MTBC isolates


text: 34414415; 34461978

text: FZB

text: public

text: DEU

text: Mycobacterium

text: Mycobacterium tuberculosis

text: WGS of MTBC isolates


text: 34414415; 34461978

text: FZB

text: public

text: DEU

text: Mycobacterium

text: Mycobacterium tuberculosis

text: WGS of MTBC isolates


text: 34414415; 34461978; 35780211

text: FZB

text: public

text: DEU

text: Mycobacterium

text: Mycobacterium tuberculosis

text: WGS of MTBC isolates


text: 34414415; 34461978; 35780211

text: FZB

text: public

text: DEU

text: Mycobacterium

text: Mycobacterium tuberculosis

text: WGS of MTBC isolates


text: 34414415; 34461978; 35780211

text: FZB

text: public

text: DEU

text: Mycobacterium

text: Mycobacterium tuberculosis

text: WGS of MTBC isolates


text: 34414415; 34461978; 35780211

text: FZB

text: public

text: DEU

text: Mycobacterium

text: Mycobacterium tuberculosis

text: WGS of MTBC isolates


text: 34414415; 34461978; 35780211

text: FZB

text: public

text: DEU

text: Mycobacterium

text: Mycobacterium tuberculosis

text: WGS of MTBC isolates


text: 26116186; 26686880; 33075053; 34461978; 35780211

text: FZB

text: public

text: Mycobacterium

text: Mycobacterium tuberculosis

text: WGS of MTBC isolates

value: broth dilution


text: FZB

text: public

text: Mycobacterium

text: Mycobacterium tuberculosis

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: Mycobacterium tuberculosis

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: Mycobacterium tuberculosis

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: Mycobacterium tuberculosis

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: Mycobacterium tuberculosis

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: Mycobacterium tuberculosis

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: Mycobacterium tuberculosis

text: WGS of MTBC isolates


text: 34414415; 34461978; 35780211

text: FZB

text: public

text: DEU

text: Mycobacterium

text: Mycobacterium tuberculosis

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: Mycobacterium tuberculosis

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: Mycobacterium tuberculosis

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: Mycobacterium tuberculosis

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: Mycobacterium tuberculosis

text: WGS of MTBC isolates


text: ED

text: public

text: house mouse

characteristic: common name

text: mutant embryo pool 4

text: Mus musculus

text: Mus musculus


text: ED

text: public

text: house mouse

text: control embryo pool 4

characteristic: description

text: Mus musculus

text: Mus musculus


characteristic: ENA-LAST-UPDATE

text: ED

text: public

text: house mouse

text: mutant embryo pool 1

text: Mus musculus

text: Mus musculus


text: ED

text: public

text: house mouse

text: control embryo pool 2

text: Mus musculus

text: Mus musculus


text: ED

text: public

text: house mouse

text: control embryo pool 1

text: Mus musculus

text: Mus musculus


text: ED

text: public

text: house mouse

text: mutant embryo pool 2

text: Mus musculus

text: Mus musculus


text: ED

text: public

text: house mouse

text: mutant embryo pool 3

text: Mus musculus

text: Mus musculus


text: ED

text: public

text: house mouse

text: control embryo pool 3

text: Mus musculus

text: Mus musculus


text: UNIVERSITY OF TORONTO

text: public

tag: Namespace:UNIVERSITY OF TORONTO

text: soil metagenome

text: soil metagenome

text: Peatland microbial community response to sulphate


text: UNIVERSITY OF HELSINKI

text: public

tag: Namespace:UNIVERSITY OF HELSINKI

text: Campylobacter jejuni Ma_1

text: Campylobacter jejuni

text: Campylobacter jejuni


text: UNIVERSITY OF HELSINKI

text: public

text: Campylobacter jejuni Le_204R

text: Campylobacter jejuni

text: Campylobacter jejuni


text: UNIVERSITY OF HELSINKI

text: public

text: Campylobacter jejuni Le_755

text: Campylobacter jejuni

text: Campylobacter jejuni


text: IOA

text: public

text: Nile tilapia

text: Include barcoded samples: F2_24_F, F2_25_F, F2_26_F, F2_27_F, F2_28_F, F2_29_F, F2_30_F, F2_31_F, F2_32_F, F2_33_F, F2_34_F, F2_35_F, F2_36_F, F2_37_F, F2_38_F, F2_40_F, F2_43_F, F2_44_F, F2_46_F, F2_47_F, F2_48_M, F2_49_M, F2_50_M, F2_51_M, F2_52_M, F2_53_M, F2_55_M, F2_56_M, F2_61_M, F2_62_M, F2_63_M, F2_66_M, F2_68_M, F2_54_M, F2_58_M, F2_59_M, F2_64_M, F2_65_M, F2_69_M, F2_71_M, F2_72_M, F2_73_M, F2_74_M, F2_77_M, F2_3_F, F2_6_F, F2_7_F, F3_1_F, F3_2_F, F3_3_F, F3_4_F, F3_5_F, F3_6_F, F3_7_F, F3_8_F, F3_9_F, F3_10_F, F3_11_M, F3_12_M, F3_13_M, F3_14_M, F3_16_M, F3_18_M, F3_19_M, F3_20_M, F3_22_M, F3_23_M, F3_24_M, F3_26_M, F3_27_M, F3_29_M, F3_30_M, F3_31_M, F3_32_M, F3_33_M, F3_34_M, F3_35_M, F3_36_M, F3_37_M, F3_38_M, F3_40_M, F3_41_M, F3_42_M, F3_43_M, F3_44_M, F3_45_M, F4_1_F, F4_2_F, F4_3_F, F4_4_F, F4_5_F, F4_6_F, F4_7_F, F4_8_F, F4_9_M, F4_10_M, F4_11_M, F4_12_M, F4_13_M, F4_14_M, F4_15_M, F4_16_M, F4_17_M, F4_18_M, F4_19_M, F4_20_M, F4_21_M, F4_22_M, F4_23_M, F4_24_M, F4_25_M, F4_26_M, F4_27_M, F4_28_M, F4_29_M, F4_30_M, F4_31_M, F4_32_M, F4_33_M, F4_34_M, F4_35_M, F4_36_M, F4_37_M, F4_38_M, F4_39_M, F4_40_M, F4_41_M, F4_42_M, F4_43_M, F4_44_M, F4_45_M, F4_46_M, F4_47_M, F4_48_M, F4_49_M, F4_50_M, F4_51_M.

text: Oreochromis niloticus

text: Oreochromis niloticus

text: fin clip

characteristic: tissue type

text: Offspring (pool III)


text: UNIVERSITY OF HELSINKI

text: public

text: Campylobacter jejuni Ma_B

characteristic: isolate

text: Campylobacter jejuni

text: Campylobacter jejuni


text: UNIVERSITY OF HELSINKI

text: public

text: Campylobacter jejuni Po_1

text: Campylobacter jejuni

text: Campylobacter jejuni


text: UNIVERSITY OF HELSINKI

text: public

text: Campylobacter jejuni Po_2

text: Campylobacter jejuni

text: Campylobacter jejuni


text: UNIVERSITY OF HELSINKI

text: public

text: Campylobacter jejuni 1_12S

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Morocco

characteristic: Country

characteristic: Haplotype

text: SC

text: public

text: Salmonella enterica serovar Typhi Isolate E00-7866 Haplotype H46

text: Salmonella enterica subsp. enterica serovar Typhi


text: Senegal

characteristic: External Id

text: SC

text: public

text: Salmonella enterica serovar Typhi Isolate E01-6750 Haplotype H52

characteristic: title


text: India

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Salmonella enterica serovar Typhi Isolate E02-1180 Haplotype H45


text: Kenya

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Salmonella enterica serovar Typhi Isolate E98-0664 Haplotype H55


text: Bangladesh

text: SC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Salmonella enterica serovar Typhi Isolate E98-2068 Haplotype H42


text: Indonesia

characteristic: ENA-CHECKLIST

text: SC

text: public

text: Salmonella enterica serovar Typhi Isolate J185SM Haplotype H85

characteristic: organism


text: Unknown

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: Salmonella enterica serovar Typhi Isolate M223 Haplotype H8


text: Indonesia

text: SC

text: public

text: Salmonella enterica serovar Typhi Isolate 404ty Haplotype H459

characteristic: description


text: Vietnam

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: Salmonella enterica serovar Typhi Isolate AG3 Haplotype H58


text: Mexico

text: SC

text: public

text: Salmonella enterica serovar Typhi Isolate E98-3139 Haplotype H50


text: Vietnam

text: SC

text: public

text: Salmonella enterica serovar Typhi Isolate 150(98)S Haplotype H63


text: Vietnam

text: SC

text: public

text: Salmonella enterica serovar Typhi Isolate 8(04)N Haplotype H58


text: Vietnam

text: SC

text: public

text: Salmonella enterica serovar Typhi Isolate CT18 Haplotype H1


text: India

text: SC

text: public

text: Salmonella enterica serovar Typhi Isolate E02-2759 Haplotype H58


text: Indonesia

text: SC

text: public

text: Salmonella enterica serovar Typhi Isolate E03-4983 Haplotype H59


text: Nepal

text: SC

text: public

text: Salmonella enterica serovar Typhi Isolate E03-9804 Haplotype H58


text: Morocco

text: SC

text: public

text: Salmonella enterica serovar Typhi Isolate ISP-03-07467 Haplotype H58


text: Central Asia

text: SC

text: public

text: Salmonella enterica serovar Typhi Isolate ISP-04-06979 Haplotype H58

text: Salmonella enterica subsp. enterica serovar Typhi


text: Russia

text: SC

text: public

text: Salmonella enterica serovar Typhi Isolate Ty2 Haplotype H10


Daldinia eschscholtzii UM 1400

text: University Malaya

text: public

text: Daldinia eschscholtzii UM 1400

tag: Namespace:University Malaya

text: The genome was assembled using Velvet version 1.2.07

text: Daldinia eschscholtzii

text: Daldinia eschscholtzii

text: Daldinia eschscholtzii UM 1400 whole genome shotgun sequence assembly


KLEB

text: CNRS-CGM

text: public

characteristic: Mating type

text: autogamy day 4

characteristic: Physiological state

characteristic: Strain

text: KLEB

text: Paramecium tetraurelia wild type control

text: Paramecium tetraurelia

text: Paramecium tetraurelia


text: CNRS-CGM

text: public

text: autogamy day 4

text: DCL2 DCL3

characteristic: RNAi target gene

text: Paramecium tetraurelia RNAi knockdown

text: Paramecium tetraurelia

text: Paramecium tetraurelia


characteristic: External Id

text: CNRS-CGM

text: public

text: autogamy day 4

text: Paramecium tetraurelia RNAi knockdown

text: Paramecium tetraurelia

text: Paramecium tetraurelia


text: HKI JENA

text: public

tag: Namespace:HKI JENA

text: 454 FLX+ Sequencing of L.ramosa in order to include transcript evidence into genome annotation. The used sample was pooled from mycelium growing under 5 different liquid conditions: (1) SUP medium (Wöstemeyer 1985) 37°C 24 hours, (2) SUP medium 37°C 22 hours + 42°C 2 hours, (3) SUP medium 37°C 22 hours + 4 mM H2O2 2 hours, (4) SUP medium 37°C 22 hours + 15mM DTPA 2 hours, (5) YNB medium + 1% glucose + 0.5% gelatine 24 hours.

text: Lichtheimia ramosa

text: Lichtheimia ramosa

text: Transcriptome sequencing of Lichtheimia ramosa

characteristic: title


text: HKI JENA

characteristic: INSDC center name

text: public

text: Whole genome sequencing of Lichtheimia ramosa with the purpose building a genome assembly

text: Lichtheimia ramosa

text: Lichtheimia ramosa

text: WGS Lichtheima ramosa


text: HKI JENA

characteristic: INSDC first public

text: public

text: Streptomyces iranensis

text: Streptomyces iranensis

text: WGS of Streptomyces iranensis


text: HKI JENA

characteristic: INSDC last update

text: public

text: 454 WGS sequencing data was assembled using Newbler 2.8. Illumina HiSeq 2000 WGS seequencing data was assembled using Velvet. Velvet scaffolds were splitted into contigs at gaps. Both assemblies were combined using minimus2. Gaps in the hybrid assembly were closed using SOAP GapCloser and refined using SEQuel.

text: Lichtheimia ramosa

text: Lichtheimia ramosa

text: Assembly of Lichtheimia ramosa genome


text: HKI JENA

text: public

characteristic: INSDC status

text: Sample of Lichtheimia ramosa JMRC:FSU:6197 for WGS

text: Lichtheimia ramosa

text: Lichtheimia ramosa

text: WGS of Lichtheimia ramosa


batch sample from activated sludge

text: DVGW-Technologiezentrum Wasser

text: public

characteristic: SRA accession

text: batch sample from activated sludge

characteristic: collection date

text: Clones created, sequenced, and assembled in HF586935-HF586952 and HF586971-HF586991

text: Wastewater treatment plant

characteristic: environment (biome)

text: Wastewater treatment plant

characteristic: environment (feature)

text: Wastewater treatment activated sludge

characteristic: environment (material)

text: wastewater/sludge

characteristic: environmental package

text: Germany

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: uncultured bacterium

text: BMBF grant no. 02WA1052

characteristic: project name

text: uncultured bacterium

text: Sanger

characteristic: sequencing method

text: batch sample from activated sludge


sand column from activated sludge

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DVGW-Technologiezentrum Wasser

text: public

text: sand column from activated sludge

characteristic: Submitter Id

text: Clones created, sequenced, and assembled in HF586953-HF586970 and HF586992-HF587014

characteristic: description

text: Wastewater treatment plant

text: Wastewater treatment plant

text: Wastewater treatment activated sludge

text: wastewater/sludge

text: Germany

text: metagenome

text: uncultured bacterium

characteristic: organism

text: BMBF grant no. 02WA1052

text: uncultured bacterium

text: Sanger

text: sand column from activated sludge


text: UOFTORONTO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: baker's yeast

characteristic: common name

text: Mapping protein level QTLs in the yeast BYxRM cross using bulk segregant analysis. The sample consists of RNA sequencing data from a pool of 96 RMxBY crosses, replicate 1

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

characteristic: title


text: UOFTORONTO

text: public

text: baker's yeast

text: Mapping protein level QTLs in the yeast BYxRM cross using bulk segregant analysis. The sample consists of RNA sequencing data from a pool of 96 RMxBY crosses, replicate 2

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: UOFTORONTO

text: public

text: baker's yeast

text: Mapping protein level QTLs in the yeast BYxRM cross using bulk segregant analysis. The sample consists of RNA sequencing data from a pool of 96 BYxBY crosses, replicate 1

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: UOFTORONTO

text: public

text: baker's yeast

text: Mapping protein level QTLs in the yeast BYxRM cross using bulk segregant analysis. The sample consists of RNA sequencing data from a pool of 96 BYxBY crosses, replicate 2

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


REPLI-g ES Sample 1

text: MPIMG

text: public

text: REPLI-g ES Sample 1

text: human

text: human DNA sample, exome sequencing performed according to REPLI-g ES protocol starting from 10 ng of genomic DNA.

text: Homo sapiens

text: Homo sapiens

text: REPLI-g ES Sample 1


REPLI-g ES Sample 2

text: MPIMG

text: public

text: REPLI-g ES Sample 2

text: human

text: Homo sapiens

text: Homo sapiens

text: REPLI-g ES Sample 2


REPLI-g ES Sample 3

text: MPIMG

text: public

text: REPLI-g ES Sample 3

text: human

text: Homo sapiens

text: Homo sapiens

text: REPLI-g ES Sample 3


text: University of Manchester

text: public

tag: Namespace:University of Manchester

text: ArrayExpress

characteristic: broker name

text: Protocols: Summary: This experiment used a wild-type and psr1 knockdown strain, grown at low and high phosphate, assayed at day 3 and day 5. Strains: C. reinhardtii wild type strain 137c (CCAP 11/32C or was obtained from the UK Culture Collection of Algae and Protozoa) and the psr1 knockdown strain (Shimogawara K1, Wykoff DD, Usuda H, Grossman AR. 1999. Chlamydomonas reinhardtii mutants abnormal in their responses to phosphorus deprivation. Plant Physiol. 120(3):685-94) from Jeff Moseley and Arthur Grossman (Carnegie Institution, Stanford, USA). Growth conditions: The strains were grown photoheterotrophically on a standard Tris-acetate-phosphate (TAP) medium (high phosphate media (HP)) (E.H. Harris, The Chlamydomonas Sourcebook: A Comprehensive Guide to Biology and Laboratory Use, Academic Press, San Diego (1989) p. 780) in 50 ml nunc flasks at 25 degree celsius under cool-white fluorescent light (150 micromol m-2 s-1.) with a 16-h light:8-h dark light regime. Before starting Phosphate deficient (low phosphate (LP)) growth, cells were grown photoheterotrophically in HP media to reach logarithmic phase then harvested and washed twice with LP media by centrifugation at 3000g for 1 min. Washed cells were then re-suspended in the same medium to get an initial cell count of ~65 x 103 cells ml-1. The LP media was prepared by reducing P content of HP media from 1 mM P to 0.1 mM P, potassium phosphate (pH 7.0) solution (K2HPO4/KH2PO4) was used as Phosphate source in media. The concentration of K was kept uniform in LP media by adding KCl. The pH of both HP and LP media was buffered to 7.0 using Tris. A total of 200 ml of WT and psr1 cultures was used for RNA extraction. The cell count of HP day 3 sample were approx. 2x 106 cells ml-1 and LP day 3 were approx 3.8 x 105 cells ml-1 . Day 5 cell count, HP: 4x106 cells ml-1 and LP: 11x 105 cells ml-1. growth was on high (1mM) or low (0.1mM) phosphate Total RNA was extracted using TRizole extraction method. SOLiDTM Total RNA-Seq Kit (PN 4445374)

characteristic: genotype

text: Chlamydomonas reinhardtii

text: Chlamydomonas reinhardtii

text: Chlamydomonas reinhardtii


text: University of Manchester

text: public

text: ArrayExpress

text: wild type

text: Chlamydomonas reinhardtii

text: Chlamydomonas reinhardtii

text: Chlamydomonas reinhardtii


characteristic: Genotype

text: Wallenberg laboratory

text: public

tag: Namespace:Wallenberg laboratory

text: sham

characteristic: Surgery

text: frebruary 2012

text: house mouse

text: Sample from cecum of mouse kept on high fat diet

text: USA

characteristic: geographic location (country and/or sea)

text: mouse cecum

text: Mus musculus

text: Mus musculus

text: Sequencing the cecal microbiota of FXR-/- and WT mice after sleeve gastrectomy and sham operations


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: wt

text: Wallenberg laboratory

text: public

text: sham

text: frebruary 2012

text: house mouse

text: Sample from cecum

text: USA

text: mouse cecum

text: Mus musculus

text: Mus musculus


characteristic: External Id

text: Wallenberg laboratory

text: public

characteristic: Submitter Id

text: vsg

text: frebruary 2012

text: house mouse

text: Sample from cecum

characteristic: description

text: USA

text: mouse cecum

text: Mus musculus

text: Mus musculus


text: Wallenberg laboratory

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: sham

text: frebruary 2012

text: house mouse

text: Sample from cecum

text: USA

text: mouse cecum

text: Mus musculus

characteristic: organism

text: Mus musculus


text: wt

text: Wallenberg laboratory

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: vsg

text: frebruary 2012

text: house mouse

text: Sample from cecum

text: USA

text: mouse cecum

text: Mus musculus

text: Mus musculus


text: ICL-CFB

text: public

characteristic: collection date

text: A clinical M89 Streptococcus pyogenes strain H395 isolated from a patient with pneumonia in the UK.

text: United Kingdom: England, London

text: Homo sapiens

characteristic: host

text: diseased; pneumonia

characteristic: host health state

text: Invasive; Blood

characteristic: isolation source

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes serotype M89

characteristic: serovar

characteristic: strain

text: Streptococcus pyogenes M89 isolate H395

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: ICL-CFB

text: public

text: A clinical M89 Streptococcus pyogenes strain H411 isolated from a patient with streptococcal toxic-shock syndrome in the UK.

characteristic: genotype

text: United Kingdom: England, London

characteristic: geographic location (country and/or sea)

text: Homo sapiens

text: diseased; streptococcal toxic-shock syndrome

text: Invasive; Blood

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes M89 isolate H411


characteristic: External Id

text: ICL-CFB

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: A clinical M89 Streptococcus pyogenes strain H543 isolated from a patient with streptococcal toxic-shock syndrome in the UK.

characteristic: description

text: United Kingdom: England, London

text: Homo sapiens

text: Invasive; Blood

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes M89 isolate H543


text: ICL-CFB

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

text: A clinical M89 Streptococcus pyogenes strain H544 isolated from a patient with infected sores and streptococcal toxic-shock syndrome in the UK.

text: United Kingdom: England, London

text: Homo sapiens

text: diseased; infected sores and streptococcal toxic-shock syndrome

text: Invasive; Blood

text: Streptococcus pyogenes serotype M89

characteristic: organism

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes M89 isolate H544


text: ICL-CFB

text: public

text: A clinical M89 Streptococcus pyogenes strain H545 isolated from a patient with pharyngitis and streptococcal toxic-shock syndrome in the UK.

text: United Kingdom: England, London

text: Homo sapiens

characteristic: host

text: diseased; pharyngitis and streptococcal toxic-shock syndrome

characteristic: host health state

text: Non-Invasive

characteristic: isolation source

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes serotype M89

characteristic: serovar

characteristic: strain

text: Streptococcus pyogenes M89 isolate H545


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: ICL-CFB

text: public

text: A clinical M89 Streptococcus pyogenes strain H621 isolated from a patient with infected knee in the UK.

characteristic: genotype

text: United Kingdom: England, London

text: Homo sapiens

text: diseased; infected knee

text: Invasive; Blood

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes M89 isolate H621

characteristic: title


characteristic: External Id

text: ICL-CFB

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: A clinical M89 Streptococcus pyogenes strain H636 isolated from a patient with empyema in the UK.

text: United Kingdom: England, London

characteristic: geographic location (country and/or sea)

text: Homo sapiens

text: diseased; empyema

text: Invasive; Blood

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes M89 isolate H636


text: ICL-CFB

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

text: A clinical M89 Streptococcus pyogenes strain H637 isolated from a patient with empyema in the UK.

characteristic: description

text: United Kingdom: England, London

text: Homo sapiens

text: diseased; empyema

text: Invasive; Pleural fluid

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes M89 isolate H637


text: ICL-CFB

text: public

text: A clinical M89 Streptococcus pyogenes strain H657 isolated from a patient with septic arthritis in the UK.

text: United Kingdom: England, London

text: Homo sapiens

characteristic: host

text: diseased; septic arthritis

characteristic: host health state

text: Invasive; Knee fluid

characteristic: isolation source

text: Streptococcus pyogenes serotype M89

characteristic: organism

text: Streptococcus pyogenes serotype M89

characteristic: serovar

text: Streptococcus pyogenes M89 isolate H657


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: ICL-CFB

text: public

text: A clinical M89 Streptococcus pyogenes strain H671 isolated from a patient with pharyngitis in the UK.

characteristic: genotype

text: United Kingdom: England, London

text: Homo sapiens

text: diseased; pharyngitis

text: Non-Invasive

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes serotype M89

characteristic: strain

text: Streptococcus pyogenes M89 isolate H671


characteristic: External Id

text: ICL-CFB

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: A clinical M89 Streptococcus pyogenes strain H686 isolated from a patient with pharyngitis in the UK.

text: United Kingdom: England, London

text: Homo sapiens

text: diseased; pharyngitis

text: Non-Invasive

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes M89 isolate H686

characteristic: title


text: ICL-CFB

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

text: A clinical M89 Streptococcus pyogenes strain H692 isolated from a patient with pharyngitis in the UK.

text: United Kingdom: England, London

characteristic: geographic location (country and/or sea)

text: Homo sapiens

text: diseased; pharyngitis

text: Non-Invasive

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes M89 isolate H692


text: ICL-CFB

text: public

text: A clinical M89 Streptococcus pyogenes strain H695 isolated from a patient with pharyngitis in the UK.

characteristic: description

text: United Kingdom: England, London

text: Homo sapiens

characteristic: host

text: diseased; pharyngitis

characteristic: host health state

text: Non-Invasive

characteristic: isolation source

text: Streptococcus pyogenes serotype M89

characteristic: organism

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes M89 isolate H695


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: ICL-CFB

text: public

text: A clinical M89 Streptococcus pyogenes strain H705 isolated from a patient with pharyngitis in the UK.

characteristic: genotype

text: United Kingdom: England, London

text: Homo sapiens

text: diseased; pharyngitis

text: Non-Invasive

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes serotype M89

characteristic: serovar

text: Streptococcus pyogenes M89 isolate H705


characteristic: External Id

text: ICL-CFB

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: A clinical M89 Streptococcus pyogenes strain H711 isolated from a patient with pharyngitis in the UK.

text: United Kingdom: England, London

text: Homo sapiens

text: diseased; pharyngitis

text: Non-Invasive

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes serotype M89

characteristic: strain

text: Streptococcus pyogenes M89 isolate H711


text: ICL-CFB

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

text: A clinical M89 Streptococcus pyogenes strain H728 isolated from a patient with pneumonia in the UK.

text: United Kingdom: England, London

text: Homo sapiens

text: diseased; pneumonia

text: Invasive; Blood

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes M89 isolate H728

characteristic: title


text: ICL-CFB

text: public

text: A clinical M89 Streptococcus pyogenes strain H740 isolated from a patient with pharyngitis in the UK.

characteristic: description

text: United Kingdom: England, London

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: host

text: diseased; pharyngitis

characteristic: host health state

text: Non-Invasive

characteristic: isolation source

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes M89 isolate H740


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: ICL-CFB

text: public

text: A clinical M89 Streptococcus pyogenes strain H741 isolated from a patient with pharyngitis in the UK.

characteristic: genotype

text: United Kingdom: England, London

text: Homo sapiens

text: diseased; pharyngitis

text: Non-Invasive

text: Streptococcus pyogenes serotype M89

characteristic: organism

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes M89 isolate H741


characteristic: External Id

text: ICL-CFB

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: A clinical M89 Streptococcus pyogenes strain H744 isolated from a patient with pharyngitis in the UK.

text: United Kingdom: England, London

text: Homo sapiens

text: diseased; pharyngitis

text: Non-Invasive

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes serotype M89

characteristic: serovar

text: Streptococcus pyogenes M89 isolate H744


text: ICL-CFB

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

text: A clinical M89 Streptococcus pyogenes strain H755 isolated from a patient with pharyngitis in the UK.

text: United Kingdom: England, London

text: Homo sapiens

text: diseased; pharyngitis

text: Non-Invasive

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes serotype M89

characteristic: strain

text: Streptococcus pyogenes M89 isolate H755


text: ICL-CFB

text: public

text: A clinical M89 Streptococcus pyogenes strain H771 isolated from a patient with pharyngitis in the UK.

characteristic: description

text: United Kingdom: England, London

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: host

text: diseased; pharyngitis

characteristic: host health state

text: Non-Invasive

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes M89 isolate H771

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: ICL-CFB

text: public

text: A clinical M89 Streptococcus pyogenes strain H773 isolated from a patient with pharyngitis in the UK.

characteristic: genotype

text: United Kingdom: England, London

text: Homo sapiens

text: diseased; pharyngitis

text: Non-Invasive

characteristic: isolation source

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes M89 isolate H773


characteristic: External Id

text: ICL-CFB

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: A clinical M89 Streptococcus pyogenes strain H774 isolated from a patient with pharyngitis in the UK.

text: United Kingdom: England, London

text: Homo sapiens

text: diseased; pharyngitis

text: Non-Invasive

text: Streptococcus pyogenes serotype M89

characteristic: organism

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes M89 isolate H774


text: ICL-CFB

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

text: A clinical M89 Streptococcus pyogenes strain H788 isolated from a patient with pharyngitis in the UK.

text: United Kingdom: England, London

text: Homo sapiens

text: diseased; pharyngitis

text: Non-Invasive

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes serotype M89

characteristic: serovar

text: Streptococcus pyogenes M89 isolate H788


text: ICL-CFB

text: public

text: A clinical M89 Streptococcus pyogenes strain H803 isolated from a patient with pharyngitis in the UK.

characteristic: description

text: United Kingdom: England, London

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: host

text: diseased; pharyngitis

characteristic: host health state

text: Non-Invasive

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes serotype M89

characteristic: strain

text: Streptococcus pyogenes M89 isolate H803


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: ICL-CFB

text: public

text: A clinical M89 Streptococcus pyogenes strain H804 isolated from a patient with pharyngitis in the UK.

characteristic: genotype

text: United Kingdom: England, London

text: Homo sapiens

text: diseased; pharyngitis

text: Non-Invasive

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes M89 isolate H804

characteristic: title


characteristic: External Id

text: ICL-CFB

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: A clinical M89 Streptococcus pyogenes strain HM11 isolated from a patient with blepharitis in the UK.

text: United Kingdom: England, London

text: Homo sapiens

text: diseased; blepharitis

text: Non-Invasive

characteristic: isolation source

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes M89 isolate HM11


text: ICL-CFB

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

text: A clinical M89 Streptococcus pyogenes strain HM18 isolated from a patient with pharyngitis in the UK.

text: United Kingdom: England, London

text: Homo sapiens

text: diseased; pharyngitis

text: Non-Invasive

text: Streptococcus pyogenes serotype M89

characteristic: organism

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes M89 isolate HM18


text: ICL-CFB

text: public

text: A clinical M89 Streptococcus pyogenes strain HM30 isolated from a patient with pharyngitis in the UK.

characteristic: description

text: United Kingdom: England, London

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: host

text: diseased; pharyngitis

characteristic: host health state

text: Non-Invasive

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes serotype M89

characteristic: serovar

text: Streptococcus pyogenes M89 isolate HM30


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: ICL-CFB

text: public

text: A clinical M89 Streptococcus pyogenes strain HM39 isolated from a patient with pharyngitis in the UK.

characteristic: genotype

text: United Kingdom: England, London

text: Homo sapiens

text: diseased; pharyngitis

text: Non-Invasive

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes serotype M89

characteristic: strain

text: Streptococcus pyogenes M89 isolate HM39


characteristic: External Id

text: ICL-CFB

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: A clinical M89 Streptococcus pyogenes strain HM42 isolated from a patient with pharyngitis in the UK.

text: United Kingdom: England, London

text: Homo sapiens

text: diseased; pharyngitis

text: Non-Invasive

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes M89 isolate HM42

characteristic: title


text: ICL-CFB

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

text: A clinical M89 Streptococcus pyogenes strain HM59 isolated from a patient with pharyngitis in the UK.

text: United Kingdom: England, London

text: Homo sapiens

text: diseased; pharyngitis

text: Non-Invasive

characteristic: isolation source

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes M89 isolate HM59


text: ICL-CFB

text: public

text: A clinical M89 Streptococcus pyogenes strain HM61 isolated from a patient with wound infection in the UK.

characteristic: description

text: United Kingdom: England, London

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: host

text: diseased; wound infection

characteristic: host health state

text: Non-Invasive

text: Streptococcus pyogenes serotype M89

characteristic: organism

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes M89 isolate HM61


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: ICL-CFB

text: public

text: A clinical M89 Streptococcus pyogenes strain HM66 isolated from a patient with pharyngitis in the UK.

characteristic: genotype

text: United Kingdom: England, London

text: Homo sapiens

text: diseased; pharyngitis

text: Non-Invasive

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes serotype M89

characteristic: serovar

text: Streptococcus pyogenes M89 isolate HM66


characteristic: External Id

text: ICL-CFB

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: A clinical M89 Streptococcus pyogenes strain HM98 isolated from a patient with pharyngitis in the UK.

text: United Kingdom: England, London

text: Homo sapiens

text: diseased; pharyngitis

text: Non-Invasive

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes serotype M89

characteristic: strain

text: Streptococcus pyogenes M89 isolate HM98


text: ICL-CFB

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

text: A clinical M89 Streptococcus pyogenes strain HM100 isolated from a patient with pharyngitis in the UK.

text: United Kingdom: England, London

text: Homo sapiens

text: diseased; pharyngitis

text: Non-Invasive

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes serotype M89

text: Streptococcus pyogenes M89 isolate HM100

characteristic: title


text: BANG

text: public

text: Meloidogyne floridensis

text: Meloidogyne floridensis

text: Meloidogyne floridensis WGS project


text: MPIMG

text: public

text: Acholeplasma oculi

text: Acholeplasma oculi

text: Acholeplasma oculi strain 19L chromosome, complete sequence


text: MPIMG

text: public

text: Acholeplasma oculi

text: Acholeplasma oculi

text: Acholeplasma oculi strain 19L, SMRT reads


text: IPK-Gatersleben

text: public

text: Secale vavilovii

text: Secale vavilovii


text: UNIMELB

text: public

text: Western roe deer

characteristic: common name

text: Capreolus capreolus WGS project

characteristic: description

text: Capreolus capreolus

text: Capreolus capreolus

text: Capreolus capreolus WGS project


characteristic: ENA-CHECKLIST

text: Uppsala BioCenter

text: public

tag: Namespace:Uppsala BioCenter

text: genome sequence of P. pisi

text: terrestrial

characteristic: environment (biome)

text: Plant roots

characteristic: environment (feature)

text: Soil

characteristic: environment (material)

text: plant-associated

characteristic: environmental package

text: Sweden

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-culture

characteristic: investigation type

text: Phytophthora pisi

characteristic: organism

text: Genome sequencing of P. pisi

characteristic: project name

text: Phytophthora pisi

text: Illumina

characteristic: sequencing method

text: Phytophthora pisi


Boerner

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RWTH Aachen

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Boerner

tag: Namespace:RWTH Aachen

characteristic: Submitter Id

text: Vitis cinerea x Vitis riparia

text: Vitis cinerea x Vitis riparia

text: Vitis riparia X Vitis cinerea cv. 'Boerner'


text: 26116186; 26686880; 33075053; 34461978; 35780211

tag: attribute

characteristic: ENA-CHECKLIST

text: FZB

text: public

characteristic: SRA accession

characteristic: description

text: Mycobacterium

characteristic: genus

characteristic: isolate

text: Mycobacterium tuberculosis complex bacterium

text: WGS of MTBC isolates

characteristic: title


text: FZB

text: public

text: Mycobacterium

characteristic: organism

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: 34414415; 34461978; 35780211

text: FZB

text: public

text: SWZ

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: 34414415; 34461978; 35780211

text: FZB

text: public

text: DEU

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: WGS of MTBC isolates


text: 26116186; 26686880; 33075053; 33347430; 34461978; 35780211

text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: 33239092; 34414415

text: FZB

text: public

text: SWZ

text: Mycobacterium

text: Homo sapiens

characteristic: host

text: WGS of MTBC isolates

value: bedaquiline

value: mg/L

value: clofazimine


text: 34414415; 34461978

text: FZB

text: public

text: DEU

text: Mycobacterium

text: WGS of MTBC isolates


text: 26116186; 26686880; 30373719; 33075053; 33347430; 34461978; 35780211

text: FZB

text: public

text: UZB

text: Mycobacterium

text: Homo sapiens

text: WGS of MTBC isolates

value: ofloxacin

value: capreomycin

value: prothionamide


text: 26116186; 26686880; 30373719; 33075053; 34461978; 35780211

text: FZB

text: public

text: UZB

text: Mycobacterium

text: Homo sapiens

text: WGS of MTBC isolates

value: amoxicillin

value: amikacin

value: cycloserine

value: para-aminosalicylic acid


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates

value: susceptible

value: Mycobacterium tuberculosis

value: rifampin


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates

value: ethambutol

value: isoniazid


text: 26116186; 26686880; 30373719; 33075053; 34461978; 35780211; 33347430

text: FZB

text: public

text: UZB

text: Mycobacterium

text: Homo sapiens

text: WGS of MTBC isolates

value: streptomycin

value: resistant

value: pyrazinamide


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates

value: broth dilution


text: 34414415; 34461978; 35780211

text: FZB

text: public

text: SWZ

text: Mycobacterium

text: WGS of MTBC isolates


text: 25599400; 33075053; 33347430

text: FZB

text: public

text: UZB

text: Mycobacterium

text: Homo sapiens

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: 26116186; 26686880; 31736907; 33075053; 34461978

text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: UZB

text: Mycobacterium

text: Homo sapiens

text: WGS of MTBC isolates


text: FZB

text: public

text: WGS of MTBC isolates


text: FZB

text: public

text: UZB

text: Mycobacterium

text: Homo sapiens

text: WGS of MTBC isolates


text: 25599400; 33075053; 33347430

text: FZB

text: public

text: GEO

text: Mycobacterium

text: Homo sapiens

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: UZB

text: Mycobacterium

text: Homo sapiens

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: UZB

text: Mycobacterium

text: Homo sapiens

text: WGS of MTBC isolates


text: FZB

text: public

text: UZB

text: Mycobacterium

text: Homo sapiens

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: 34414415; 34461978; 35780211

text: FZB

text: public

text: DEU

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: WGS of MTBC isolates


text: 26116186; 26686880; 30373719; 33075053; 35780211

text: FZB

text: public

text: UZB

text: Mycobacterium

text: Homo sapiens

text: WGS of MTBC isolates


text: 26116186; 26686880; 33075053; 35780211

text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: 33347430; 34414415; 34461978; 35780211

text: FZB

text: public

text: DEU

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: 30373719; 33075053; 35780211; 33347430

text: FZB

text: public

text: UZB

text: Mycobacterium

text: Homo sapiens

text: WGS of MTBC isolates

value: ethionamide


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: UZB

text: Mycobacterium

text: Homo sapiens

text: WGS of MTBC isolates

value: ofloxacin


text: 34414415; 34461978; 35780211

text: FZB

text: public

text: SWZ

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: UZB

text: Mycobacterium

text: Homo sapiens

text: WGS of MTBC isolates

value: capreomycin


text: 25599400; 33075053; 33347430; 34461978

text: FZB

text: public

text: DNK

text: Mycobacterium

text: Homo sapiens

text: WGS of MTBC isolates


text: 25599400; 33075053; 33347430; 34414415; 34461978

text: FZB

text: public

text: ZAF

text: Mycobacterium

text: Homo sapiens

text: WGS of MTBC isolates

value: prothionamide

value: ciprofloxacin


text: FZB

text: public

text: WGS of MTBC isolates


text: 33239092; 34414415; 34461978; 35780211

text: FZB

text: public

text: SWZ

text: Mycobacterium

text: Homo sapiens

text: WGS of MTBC isolates

value: bedaquiline

value: mg/L

value: clofazimine


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates

value: susceptible


text: FZB

text: public

text: UZB

text: Mycobacterium

text: Homo sapiens

text: WGS of MTBC isolates

value: Mycobacterium tuberculosis

value: cycloserine

value: para-aminosalicylic acid

value: amikacin

value: amoxicillin


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates

value: isoniazid

value: rifampin

value: streptomycin

value: ethambutol


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates

value: broth dilution

value: pyrazinamide


text: FZB

text: public

text: UZB

text: Mycobacterium

text: Homo sapiens

text: WGS of MTBC isolates

value: resistant

value: ofloxacin

value: capreomycin

value: prothionamide


text: FZB

text: public

text: UZB

text: Mycobacterium

text: Homo sapiens

text: WGS of MTBC isolates


text: 34414415; 34461978; 35780211

text: FZB

text: public

text: SWZ

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: 26116186; 26686880

text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: UZB

text: Mycobacterium

text: Homo sapiens

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: 26116186; 26686880; 30373719; 33075053; 35780211; 33347430

text: FZB

text: public

text: UZB

text: Mycobacterium

text: Homo sapiens

text: WGS of MTBC isolates


text: FZB

text: public

text: UZB

text: Mycobacterium

text: Homo sapiens

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: 25599400; 26116186; 26686880; 30373719; 33075053; 34461978; 33347430

text: FZB

text: public

text: UZB

text: Mycobacterium

text: Homo sapiens

text: WGS of MTBC isolates


text: 25599400; 33075053; 33347430

text: FZB

text: public

text: TKM

text: Mycobacterium

text: Homo sapiens

text: WGS of MTBC isolates


text: FZB

text: public

text: UZB

text: Mycobacterium

text: Homo sapiens

text: WGS of MTBC isolates


text: FZB

text: public

text: UZB

text: Mycobacterium

text: Homo sapiens

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates

value: moxifloxacin


text: 34414415; 34461978; 35780211

text: FZB

text: public

text: SWZ

text: Mycobacterium

text: WGS of MTBC isolates

value: susceptible


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates

value: Mycobacterium tuberculosis


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: 26116186; 26686880; 33075053; 35780211

text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: UZB

text: Mycobacterium

text: Homo sapiens

text: WGS of MTBC isolates

value: cycloserine


text: FZB

text: public

text: UZB

text: Mycobacterium

text: Homo sapiens

text: WGS of MTBC isolates

value: para-aminosalicylic acid


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: 34414415; 34461978; 35780211

text: FZB

text: public

text: SWZ

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: UZB

text: Mycobacterium

text: Homo sapiens

text: WGS of MTBC isolates

value: amikacin


text: FZB

text: public

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: 26116186; 26686880; 33075053; 35780211

text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: 26116186; 26686880; 33075053; 35780211

text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: UZB

text: Mycobacterium

text: Homo sapiens

text: WGS of MTBC isolates

value: amoxicillin


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates

value: isoniazid


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates

value: rifampin


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates

value: streptomycin


text: FZB

text: public

text: UZB

text: Mycobacterium

text: Homo sapiens

text: WGS of MTBC isolates

value: ethambutol


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates

value: broth dilution


text: FZB

text: public

text: UZB

text: Mycobacterium

text: Homo sapiens

text: WGS of MTBC isolates

value: pyrazinamide


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates

value: resistant


text: FZB

text: public

text: UZB

text: Mycobacterium

text: Homo sapiens

text: WGS of MTBC isolates

value: ofloxacin


text: 33239092; 34414415; 34461978; 35780211

text: FZB

text: public

text: SWZ

text: Mycobacterium

text: Homo sapiens

text: WGS of MTBC isolates

value: bedaquiline

value: mg/L

value: clofazimine


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates

value: susceptible


text: 34414415; 34461978; 35780211

text: FZB

text: public

text: SWZ

text: Mycobacterium

text: WGS of MTBC isolates

value: Mycobacterium tuberculosis


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: 34414415; 34461978; 35780211

text: FZB

text: public

text: SWZ

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: 34414415; 34461978; 35780211

text: FZB

text: public

text: SWZ

text: Mycobacterium

text: WGS of MTBC isolates


text: 34414415; 34461978; 35780211

text: FZB

text: public

text: SWZ

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: 26116186; 26686880; 33075053; 35780211

text: FZB

text: public

text: Mycobacterium

text: WGS of MTBC isolates


text: 25599400; 26116186; 26686880; 30373719; 33075053; 34461978; 35780211; 33347430

text: FZB

text: public

text: UZB

text: Mycobacterium

text: Homo sapiens

text: WGS of MTBC isolates

value: ethionamide

value: prothionamide

value: cycloserine

value: capreomycin