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characteristic: longitude

text: y

characteristic: newilluminadatagenerated

text: human gut metagenome

text: y

characteristic: public

characteristic: run

characteristic: run lane

text: 0.01, g

characteristic: sample id

characteristic: sample name

text: human gut metagenome

characteristic: sex

characteristic: taxon id


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

characteristic: age in years

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: n

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: human gut metagenome

characteristic: common name

characteristic: depth

characteristic: description

characteristic: elevation

text: ENVO:human-associated habitat

characteristic: env biome

text: ENVO:human-associated habitat

characteristic: env feature

text: ENVO:feces

text: Father

text: n

text: GAZ:Venezuela

text: human

text: y

text: human gut metagenome

characteristic: organism

text: y

text: 0.01, g

text: human gut metagenome

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: n

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human gut metagenome

text: ENVO:human-associated habitat

text: ENVO:human-associated habitat

text: ENVO:feces

characteristic: env matter

text: Mother

characteristic: family relationship

text: n

text: GAZ:Malawi

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: y

characteristic: newilluminadatagenerated

text: human gut metagenome

text: y

characteristic: public

characteristic: run

characteristic: run lane

text: 0.01, g

characteristic: sample id

characteristic: sample name

text: human gut metagenome

characteristic: sex

characteristic: taxon id


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

characteristic: age in years

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: n

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: human gut metagenome

characteristic: common name

characteristic: depth

characteristic: description

characteristic: elevation

text: ENVO:human-associated habitat

characteristic: env biome

text: ENVO:human-associated habitat

characteristic: env feature

text: ENVO:feces

text: n

text: GAZ:United States of America

text: human

text: y

text: human gut metagenome

characteristic: organism

text: y

text: 0.01, g

text: human gut metagenome

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: n

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human gut metagenome

text: ENVO:human-associated habitat

text: ENVO:human-associated habitat

text: ENVO:feces

characteristic: env matter

text: n

text: GAZ:Venezuela

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: y

characteristic: newilluminadatagenerated

text: human gut metagenome

text: y

characteristic: public

characteristic: run

characteristic: run lane

text: 0.01, g

characteristic: sample id

characteristic: sample name

text: human gut metagenome

characteristic: taxon id


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: age

characteristic: age in years

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: n

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: human gut metagenome

characteristic: common name

characteristic: depth

characteristic: description

characteristic: elevation

text: ENVO:human-associated habitat

characteristic: env biome

text: ENVO:human-associated habitat

characteristic: env feature

text: ENVO:feces

text: Sister

characteristic: family relationship

text: n

text: GAZ:Venezuela

text: human

text: y

text: human gut metagenome

characteristic: organism

text: y

text: 0.01, g

text: human gut metagenome

characteristic: sex

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

characteristic: age in years

text: n

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human gut metagenome

text: ENVO:human-associated habitat

text: ENVO:human-associated habitat

text: ENVO:feces

characteristic: env matter

text: n

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: y

characteristic: newilluminadatagenerated

text: human gut metagenome

text: y

characteristic: public

characteristic: run

characteristic: run lane

text: 0.01, g

characteristic: sample id

characteristic: sample name

text: human gut metagenome

characteristic: taxon id


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: DKFZ

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: genmoic DNA was isolated from the primray pancreatic cancer cell line JoPaca-1 in passage 4 and sunbjected to whole genome sequencing on Illumina HighSeq2000.

characteristic: description

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: genomic DNA of JoPaca-1

characteristic: title


text: SRA-Webin

text: DKFZ

text: public

text: human

text: BxPC-3 was authenticated by the DSMZ, Braunschweig, Germany. Genomic DNA was isolated and subjected to whole genome sequencing on Illumina HighSeq 2000 at 15x coverage.

text: Homo sapiens

text: Homo sapiens

text: genomic DNA of BxPC-3


text: SRA-Webin

text: ULAVAL

text: public

text: Leishmania major strain Friedlin

text: Leishmania major strain Friedlin

text: Leishmania major Friedlin mutant 4 resistant to antimony


text: SRA-Webin

text: ULAVAL

text: public

text: Leishmania major strain Friedlin

text: Leishmania major strain Friedlin

text: Leishmania major Friedlin mutant 3 resistant to antimony


text: SRA-Webin

text: ULAVAL

text: public

text: Leishmania major strain Friedlin

text: Leishmania major strain Friedlin

text: Leishmania major Friedlin mutant 5 resistant to antimony


text: 28.8 degree C

characteristic: AgaroseMigrationTemperature

text: 2 hour

characteristic: AgaroseMigrationTtime

text: 28 degree C

characteristic: BaermannTemperature

text: Penn Genome Frontiers Institute

text: public

tag: Namespace:Penn Genome Frontiers Institute

text: 2 hour

characteristic: baermann time&temp

text: ArrayExpress

characteristic: broker name

text: Isolated from fresh canine feces

characteristic: culture

text: na degree C

characteristic: culture temperature

text: na hour

characteristic: culture time

text: Protocols: Free-living stages grown in charcoal coprocultures; parasitic stages grown in Mongolian gerbils (See doi/10.1895/wormbook.1.134.1 for complete details) In noted samples, worms are isolated by the Baermann funnel technique and migrated through low melting temperature agarose to clean off residual debris and bacterial contamination. Briefly, worms in fecal charcoal cultures are placed in an inverted glass funnel in a mesh-bottomed dish and surrounded with slightly warmer water. Worms migrate into the warmer liquid and settle to the bottom of the funnel to which a rubber hose with a clamp is attached. Worms are then collected, liquid removed, and mixed with low melting temperature agarose. The worm and agarose mixture is allowed to gel and worms migrated out into a surrounding liquid at a slightly elevated temperature. For both L3+ and parasitic females, no agarose migration was performed; instead, worms were washed several times in media as noted in the individual samples. (See doi/10.1895/wormbook.1.134.1 for complete protocol) TRIzol extraction of total RNA from samples snap-frozen in liquid nitrogen. This method involves purifying the poly-A containing mRNA molecules from the total RNA using poly-T oligo-attached magnetic beads. Following purification, the mRNA is fragmented into small pieces using divalent cations under elevated temperature. The cleaved RNA fragments are copied into first strand cDNA using reverse transcriptase and random primers. This is followed by second strand cDNA synthesis using DNA Polymerase I and RNase H. These cDNA fragments then go through an end repair process, the addition of a single ‘A’ base, and then ligation of the adapters. The products are then purified and enriched with PCR to create the final cDNA library for sequencing on the Illumina HiSeq 2000. (See www.illumina.com Catalog # RS-930-2001 for a complete protocol)

text: Post parasitic first stage larvae

characteristic: developmental stage

text: Strongyloides stercoralis

text: Strongyloides stercoralis

text: Strongyloides stercoralis

text: Mixed sex

characteristic: sex

characteristic: strain


text: 27 degree C

text: 1 hour

text: 29 degree C

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Penn Genome Frontiers Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 1 hour

text: ArrayExpress

text: Incubated

text: 20.6 degree C

text: 48 hour

text: Young gravid females with 2-6 eggs per gonadal arm

text: Strongyloides stercoralis

text: Strongyloides stercoralis

text: Strongyloides stercoralis

text: Female


text: 29 degree C

characteristic: AgaroseMigrationTemperature

text: 2 hour

characteristic: AgaroseMigrationTtime

text: 28 degree C

characteristic: BaermannTemperature

text: Penn Genome Frontiers Institute

text: public

characteristic: Submitter Id

characteristic: Wash

text: 1 hour

text: ArrayExpress

text: Incubated

text: 25 degree C

text: 7 day

characteristic: description

text: Infectious third stage larvae

text: Strongyloides stercoralis

characteristic: organism

text: Strongyloides stercoralis

text: Strongyloides stercoralis

text: Female

characteristic: title


text: na degree C

text: na hour

text: na degree C

text: Penn Genome Frontiers Institute

text: public

text: na hour

characteristic: baermann time&temp

text: ArrayExpress

characteristic: broker name

text: In vivo

characteristic: culture

text: na degree C

characteristic: culture temperature

text: 21 day

characteristic: culture time

text: Gravid parasitic females

characteristic: developmental stage

text: Strongyloides stercoralis

text: Strongyloides stercoralis

text: Strongyloides stercoralis

text: Female

characteristic: sex

characteristic: strain


text: 28.5 degree C

text: 2 hour

text: 28 degree C

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Penn Genome Frontiers Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 2 hour

text: ArrayExpress

text: Isolated from fresh canine feces

text: na degree C

text: na hour

text: Post parasitic first stage larvae

text: Strongyloides stercoralis

text: Strongyloides stercoralis

text: Strongyloides stercoralis

text: Mixed sex


text: 29 degree C

characteristic: AgaroseMigrationTemperature

text: 1 hour

characteristic: AgaroseMigrationTtime

text: 29 degree C

characteristic: BaermannTemperature

text: Penn Genome Frontiers Institute

text: public

characteristic: Submitter Id

text: 1 hour

text: ArrayExpress

text: Incubated

text: 21 degree C

text: 48 hour

characteristic: description

text: Young gravid females with 1-6 eggs per gonadal arm

text: Strongyloides stercoralis

characteristic: organism

text: Strongyloides stercoralis

text: Strongyloides stercoralis

text: Female

characteristic: title


text: 253 degree C

text: 2 hour

text: 29 degree C

text: Penn Genome Frontiers Institute

text: public

text: 2 hour

characteristic: baermann time&temp

text: ArrayExpress

characteristic: broker name

text: Isolated from fresh canine feces

characteristic: culture

text: na degree C

characteristic: culture temperature

text: na hour

characteristic: culture time

text: Post parasitic first stage larvae

characteristic: developmental stage

text: Strongyloides stercoralis

text: Strongyloides stercoralis

text: Strongyloides stercoralis

text: Mixed sex

characteristic: sex


text: 28.5 degree C

text: 2 hour

text: 29 degree C

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Penn Genome Frontiers Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: 2 hour

text: ArrayExpress

text: Incubated

text: 20.5 degree C

text: 72 hour

text: Post free living first stage larvae

text: Strongyloides stercoralis

text: Strongyloides stercoralis

text: Strongyloides stercoralis

text: Female

characteristic: strain


text: na degree C

characteristic: AgaroseMigrationTemperature

text: na hour

characteristic: AgaroseMigrationTtime

text: na degree C

characteristic: BaermannTemperature

text: Penn Genome Frontiers Institute

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Washed_several_times_in_DMEM+Gentamicin_at_37C

characteristic: Wash

text: na hour

text: ArrayExpress

text: In vivo

text: na degree C

text: 3 day

characteristic: description

text: Tissue migrating third stage larvae

text: Strongyloides stercoralis

text: Strongyloides stercoralis

text: Strongyloides stercoralis

text: Female


text: 29 degree C

text: 1 hour

text: 29.5 degree C

text: Penn Genome Frontiers Institute

text: public

text: 1 hour

characteristic: baermann time&temp

text: ArrayExpress

characteristic: broker name

text: Incubated

characteristic: culture

text: 21 degree C

characteristic: culture temperature

text: 24 hour

characteristic: culture time

text: Post parasitic heterogonically developing ~third stage larvae

characteristic: developmental stage

text: Strongyloides stercoralis

characteristic: organism

text: Strongyloides stercoralis

text: Strongyloides stercoralis

text: Female enriched

characteristic: title


text: 27.5 degree C

text: 0.5 hour

text: 27 degree C

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Penn Genome Frontiers Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: 1 hour

text: ArrayExpress

text: Incubated

text: 21 degree C

text: 10 day

text: Infectious third stage larvae

text: Strongyloides stercoralis

text: Strongyloides stercoralis

text: Strongyloides stercoralis

text: Female

characteristic: sex

characteristic: strain


text: 25 degree C

characteristic: AgaroseMigrationTemperature

text: 2 hour

characteristic: AgaroseMigrationTtime

text: 29 degree C

characteristic: BaermannTemperature

text: Penn Genome Frontiers Institute

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 1 hour

text: ArrayExpress

text: Incubated

text: 21 degree C

text: 24 hour

characteristic: description

text: Strongyloides stercoralis

text: Strongyloides stercoralis

text: Strongyloides stercoralis

text: Female enriched


text: 29.53 degree C

text: 2 hour

text: 29 degree C

text: Penn Genome Frontiers Institute

text: public

text: 2 hour

characteristic: baermann time&temp

text: ArrayExpress

characteristic: broker name

text: Incubated

characteristic: culture

text: 20.5 degree C

characteristic: culture temperature

text: 72 hour

characteristic: culture time

text: Post free living first stage larvae

characteristic: developmental stage

text: Strongyloides stercoralis

characteristic: organism

text: Strongyloides stercoralis

text: Strongyloides stercoralis

text: Female


text: 27 degree C

text: 1 hour

text: 28 degree C

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Penn Genome Frontiers Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: 1 hour

text: ArrayExpress

text: Incubated

text: 20.6 degree C

text: 24 hour

text: Strongyloides stercoralis

text: Strongyloides stercoralis

text: Strongyloides stercoralis

text: Female enriched

characteristic: title


text: 29 degree C

characteristic: AgaroseMigrationTemperature

text: 2 hour

characteristic: AgaroseMigrationTtime

text: 29 degree C

characteristic: BaermannTemperature

text: Penn Genome Frontiers Institute

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 2 hour

text: ArrayExpress

text: Incubated

text: 21 degree C

text: 72 hour

text: Post free living first stage larvae

text: Strongyloides stercoralis

text: Strongyloides stercoralis

text: Strongyloides stercoralis

text: Female

characteristic: sex

characteristic: strain


text: 29 degree C

text: 1 hour

text: 28 degree C

text: Penn Genome Frontiers Institute

text: public

characteristic: Submitter Id

text: 1 hour

characteristic: baermann time&temp

text: ArrayExpress

characteristic: broker name

text: Incubated

characteristic: culture

text: 20.5 degree C

characteristic: culture temperature

text: 48 hour

characteristic: culture time

characteristic: description

text: Young gravid females with 2-10 eggs per gonadal arm

text: Strongyloides stercoralis

text: Strongyloides stercoralis

text: Strongyloides stercoralis

text: Female


text: 28.5 degree C

text: 2 hour

text: 30 degree C

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Penn Genome Frontiers Institute

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: 1 hour

text: ArrayExpress

text: Incubated

text: 21 degree C

text: 8 day

text: Young infectious third stage larvae

characteristic: developmental stage

text: Strongyloides stercoralis

characteristic: organism

text: Strongyloides stercoralis

text: Strongyloides stercoralis

text: Female


text: CCME-COLORADO

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: age

characteristic: age in years

characteristic: age unit

characteristic: anonymized name

text: y

text: UBERON:oral cavity

characteristic: body habitat

text: UBERON:mucus

characteristic: body product

text: UBERON:mouth

characteristic: body site

text: human oral metagenome

characteristic: common name

text: human orapharynx swab

text: human orapharynx swab

characteristic: elevation

text: ENVO:human-associated habitat

characteristic: env biome

text: ENVO:human-associated habitat

characteristic: env feature

text: ENVO:mucus

characteristic: env matter

text: GAZ:Ecuador

characteristic: geographic location (country and/or sea)

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: human oral metagenome

text: n

characteristic: public

text: throat swab

characteristic: sample id

characteristic: sample name

text: human oral metagenome

characteristic: taxon id

characteristic: title

text: Upper Airways Microbiota in Wheezing and Healthy Infants from the Tropics of Rural Ecuador


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

characteristic: age in years

characteristic: age unit

characteristic: anonymized name

text: y

text: UBERON:oral cavity

characteristic: body habitat

text: UBERON:mucus

characteristic: body product

text: UBERON:mouth

text: human oral metagenome

text: human orapharynx swab

characteristic: description

text: human orapharynx swab

text: ENVO:human-associated habitat

text: ENVO:human-associated habitat

text: ENVO:mucus

text: GAZ:Ecuador

text: human oral metagenome

characteristic: organism

text: n

text: throat swab

text: human oral metagenome

characteristic: sex


Luzula elegans

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

text: IPK-Gatersleben

text: public

text: Luzula elegans

text: woodrushes

characteristic: common name

text: Genomic DNA isolated from leaf material of 3 indepent Luzula elegans plants

text: Luzula

text: Luzula

text: Luzula elegans genomic DNA

characteristic: title


name: Teladorsagia circumcincta transcriptome sequencing sample: naive exposed

characteristic: External Id

text: ED

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Teladorsagia circumcincta exsheathed L3 RNA sample following 4 hour exposure to naive ovine abomasal environment

text: Naive ovine abomasal exposed

characteristic: environment

text: Teladorsagia circumcincta

text: Teladorsagia circumcincta

text: RNA from Teladorsagia circumcincta

characteristic: source


name: Teladorsagia circumcincta transcriptome sequencing sample: immune exposed

text: ED

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Teladorsagia circumcincta exsheathed L3 RNA sample following 4 hour exposure to immune ovine abomasal environment

text: Immune ovine abomasal exposed

text: Teladorsagia circumcincta

text: Teladorsagia circumcincta

text: RNA from Teladorsagia circumcincta


text: Yersinia pekkanenii

characteristic: ArrayExpress-Species

characteristic: ENA-CHECKLIST

text: SC

text: public

text: CIP110230T-sc-2012-05-10T13:21:31Z-1414804

characteristic: collection date

text: not known

characteristic: host health state

text: not known

characteristic: isolation source

text: Yersinia pekkanenii

text: Yersinia pekkanenii

text: not known

characteristic: serovar

text: not known

characteristic: specific host

characteristic: strain

text: Yersinia pekkanenii; Yersinia pekkanenii


DenisovaPhalanx

text: Denisova 3

characteristic: Bone ID

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPI-EVA

text: public

text: DenisovaPhalanx

characteristic: amount or size of sample collected

text: Denisova 3

characteristic: anonymized name

text: Denisova hominin

characteristic: common name

text: Denisova Phalanx

characteristic: description

text: Russian Federation:Altaysky Kray,Soloneshensky Rayon

text: 1.7 +/- 0.3

characteristic: geographic location (depth)

text: 51.398 N 84.675 E

text: Taq Polymerase, Phusion Polymerase

characteristic: nucleic acid amplification

text: silica extraction

characteristic: nucleic acid extraction

text: Homo sapiens ssp. Denisova

characteristic: organism

text: Homo sapiens ssp. Denisova

text: Denisova Phalanx

characteristic: title


S. pneumoniae T3M1

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

text: ULAVAL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: S. pneumoniae T3M1

characteristic: Submitter Id

text: S. pneumoniae R6 was used as a recipient strain for the transformation of gDNA derived from the in vitro-generated S. pneumoniae R6M1-CTX mutant resistant to cefotaxime.

text: Streptococcus pneumoniae R6

text: Streptococcus pneumoniae R6

text: S. pneumoniae R6 transformed with gDNA derived from the R6M1-CTX mutant


S. pneumoniae R6M1-CTX

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: External Id

text: ULAVAL

text: public

text: S. pneumoniae R6M1-CTX

text: The S. pneumoniae R6M1-CTX was generated by cefotaxime (CTX) increments from S. pneumoniae R6 until it had a CTX MIC of 4ug/ml

text: Streptococcus pneumoniae R6

text: Streptococcus pneumoniae R6

text: S. pneumoniae R6 mutant resistant to cefotaxime


S. pneumoniae R6M3-CTX

text: SRA-Webin

text: ULAVAL

text: public

text: S. pneumoniae R6M3-CTX

text: The S. pneumoniae R6M3-CTX was generated by cefotaxime (CTX) increments from S. pneumoniae R6 until it had a CTX MIC of 8ug/ml

text: Streptococcus pneumoniae R6

text: Streptococcus pneumoniae R6


S. pneumoniae T3M2

text: SRA-Webin

text: ULAVAL

text: public

text: S. pneumoniae T3M2

text: S. pneumoniae R6 was used as a recipient strain for the transformation of gDNA derived from the in vitro-generated S. pneumoniae R6M2-CTX mutant resistant to cefotaxime.

text: Streptococcus pneumoniae R6

text: Streptococcus pneumoniae R6

text: S. pneumoniae R6 transformed with gDNA derived from the R6M2-CTX mutant


text: SRA-Webin

text: ICTAR

text: public

text: metagenomes

text: metagenomes


text: SRA-Webin

text: MPI-TUEBINGEN

text: public

text: Capsella rubella

text: Capsella rubella

text: Capsella rubella bulk segregant reads (F2 population of crosses between accessions 1408 and MTE)


text: SRA-Webin

text: BGI

text: public

characteristic: anonymized name

text: human

characteristic: common name

text: An anonymous male Han Chinese individual who has no known genetic diseases

text: Homo sapiens

text: Homo sapiens

text: The first Asian genome


text: SRA-Webin

text: DPSQ

text: public

text: Saccharomyces arboricola H-6

text: Saccharomyces arboricola H-6

text: Saccharomyces arboriculus single fragment SOLiD reads


text: SRA-Webin

text: DPSQ

text: public

text: Saccharomyces arboricola H-6

text: Saccharomyces arboricola H-6

text: S. arboriculus genomic single fragment 454 reads


text: SRA-Webin

text: DPSQ

text: public

text: Saccharomyces arboricola H-6

text: Saccharomyces arboricola H-6

text: S. arboriculus genomic paired-end 454 reads


text: CCME-COLORADO

text: public

characteristic: altitude

text: n

characteristic: collection date

text: ecological metagenome unclassified

characteristic: depth

characteristic: description

characteristic: elevation

text: ENVO:terrestrial biome

characteristic: env biome

text: ENVO:anthropogenic habitat

characteristic: env feature

text: ENVO:surface

characteristic: env matter

characteristic: genericdescription

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: A

characteristic: kitchen

characteristic: latitude

characteristic: longitude

text: metagenomes

text: y

characteristic: public

text: cotton swab

characteristic: sample id

characteristic: sample name

text: metagenomes

characteristic: taxon id

text: Kitchen Surface Microbiology


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: n

text: ecological metagenome unclassified

characteristic: common name

text: ENVO:terrestrial biome

text: ENVO:anthropogenic habitat

text: ENVO:surface

text: GAZ:United States of America

text: C

text: metagenomes

characteristic: organism

text: y

text: cotton swab

text: metagenomes

characteristic: title

text: Kitchen Surface Microbiology


text: CCME-COLORADO

text: public

text: n

characteristic: collection date

text: ecological metagenome unclassified

characteristic: depth

characteristic: description

characteristic: elevation

text: ENVO:terrestrial biome

characteristic: env biome

text: ENVO:anthropogenic habitat

characteristic: env feature

text: ENVO:surface

characteristic: env matter

characteristic: genericdescription

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: D

characteristic: kitchen

characteristic: latitude

characteristic: longitude

text: metagenomes

text: y

characteristic: public

text: cotton swab

characteristic: sample id

text: metagenomes

text: Kitchen Surface Microbiology


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: n

text: ecological metagenome unclassified

characteristic: common name

text: blank

text: blank

text: ENVO:terrestrial biome

text: ENVO:anthropogenic habitat

text: ENVO:surface

text: blank

text: GAZ:United States of America

text: A

text: metagenomes

text: y

text: cotton swab

characteristic: sample name

text: metagenomes

characteristic: taxon id

text: Kitchen Surface Microbiology


text: CCME-COLORADO

text: public

text: n

characteristic: collection date

text: ecological metagenome unclassified

characteristic: depth

characteristic: description

characteristic: elevation

text: ENVO:terrestrial biome

characteristic: env biome

text: ENVO:anthropogenic habitat

characteristic: env feature

text: ENVO:surface

characteristic: env matter

characteristic: genericdescription

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: B

characteristic: kitchen

characteristic: latitude

characteristic: longitude

text: metagenomes

characteristic: organism

text: y

text: cotton swab

text: metagenomes

characteristic: title

text: Kitchen Surface Microbiology


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: n

text: ecological metagenome unclassified

characteristic: common name

text: sponge

text: sponge

text: ENVO:terrestrial biome

text: ENVO:anthropogenic habitat

text: ENVO:surface

text: Sponge

text: GAZ:United States of America

text: D

text: metagenomes

text: y

characteristic: public

text: cotton swab

characteristic: sample id

text: metagenomes

text: Kitchen Surface Microbiology


text: CCME-COLORADO

text: public

text: n

characteristic: collection date

text: ecological metagenome unclassified

characteristic: depth

text: Stove-knobs

characteristic: description

text: Stove-knobs

characteristic: elevation

text: ENVO:terrestrial biome

characteristic: env biome

text: ENVO:anthropogenic habitat

characteristic: env feature

text: ENVO:surface

characteristic: env matter

characteristic: genericdescription

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: C

characteristic: kitchen

characteristic: latitude

characteristic: longitude

text: metagenomes

text: y

text: cotton swab

characteristic: sample name

text: metagenomes

characteristic: taxon id

text: Kitchen Surface Microbiology


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: n

text: ecological metagenome unclassified

characteristic: common name

text: ENVO:terrestrial biome

text: ENVO:anthropogenic habitat

text: ENVO:surface

text: Wall

text: GAZ:United States of America

text: C

text: metagenomes

characteristic: organism

text: y

text: cotton swab

text: metagenomes

characteristic: title

text: Kitchen Surface Microbiology


text: CCME-COLORADO

text: public

text: n

characteristic: collection date

text: ecological metagenome unclassified

characteristic: depth

text: Stove-knobs

characteristic: description

text: Stove-knobs

characteristic: elevation

text: ENVO:terrestrial biome

characteristic: env biome

text: ENVO:anthropogenic habitat

characteristic: env feature

text: ENVO:surface

characteristic: env matter

characteristic: genericdescription

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: B

characteristic: kitchen

characteristic: latitude

characteristic: longitude

text: metagenomes

text: y

characteristic: public

text: cotton swab

characteristic: sample id

text: metagenomes

text: Kitchen Surface Microbiology


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: n

text: ecological metagenome unclassified

characteristic: common name

text: Faucet

text: Faucet

text: ENVO:terrestrial biome

text: ENVO:anthropogenic habitat

text: ENVO:surface

text: Faucet

text: GAZ:United States of America

text: C

text: metagenomes

text: y

text: cotton swab

characteristic: sample name

text: metagenomes

characteristic: taxon id

text: Kitchen Surface Microbiology


text: CCME-COLORADO

text: public

text: n

characteristic: collection date

text: ecological metagenome unclassified

characteristic: depth

characteristic: description

characteristic: elevation

text: ENVO:terrestrial biome

characteristic: env biome

text: ENVO:anthropogenic habitat

characteristic: env feature

text: ENVO:surface

characteristic: env matter

characteristic: genericdescription

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: C

characteristic: kitchen

characteristic: latitude

characteristic: longitude

text: metagenomes

characteristic: organism

text: y

text: cotton swab

text: metagenomes

text: Kitchen Surface Microbiology

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: n

text: ecological metagenome unclassified

characteristic: common name

text: ENVO:terrestrial biome

text: ENVO:anthropogenic habitat

text: ENVO:surface

text: GAZ:United States of America

text: D

text: metagenomes

text: y

characteristic: public

text: cotton swab

characteristic: sample id

text: metagenomes

text: Kitchen Surface Microbiology


text: CCME-COLORADO

text: public

text: n

characteristic: collection date

text: ecological metagenome unclassified

characteristic: depth

characteristic: description

characteristic: elevation

text: ENVO:terrestrial biome

characteristic: env biome

text: ENVO:anthropogenic habitat

characteristic: env feature

text: ENVO:surface

characteristic: env matter

text: Wall

characteristic: genericdescription

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: B

characteristic: kitchen

characteristic: latitude

characteristic: longitude

text: metagenomes

text: y

text: cotton swab

characteristic: sample name

text: metagenomes

characteristic: taxon id

text: Kitchen Surface Microbiology


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: n

text: ecological metagenome unclassified

characteristic: common name

text: ENVO:terrestrial biome

text: ENVO:anthropogenic habitat

text: ENVO:surface

text: Wall

text: GAZ:United States of America

text: A

text: metagenomes

characteristic: organism

text: y

text: cotton swab

text: metagenomes

characteristic: title

text: Kitchen Surface Microbiology


text: CCME-COLORADO

text: public

text: n

characteristic: collection date

text: ecological metagenome unclassified

characteristic: depth

characteristic: description

characteristic: elevation

text: ENVO:terrestrial biome

characteristic: env biome

text: ENVO:anthropogenic habitat

characteristic: env feature

text: ENVO:surface

characteristic: env matter

characteristic: genericdescription

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: B

characteristic: kitchen

characteristic: latitude

characteristic: longitude

text: metagenomes

text: y

characteristic: public

text: cotton swab

characteristic: sample id

text: metagenomes

text: Kitchen Surface Microbiology


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: n

text: ecological metagenome unclassified

characteristic: common name

text: Faucet

text: Faucet

text: ENVO:terrestrial biome

text: ENVO:anthropogenic habitat

text: ENVO:surface

text: Faucet

text: GAZ:United States of America

text: A

text: metagenomes

text: y

text: cotton swab

characteristic: sample name

text: metagenomes

characteristic: taxon id

text: Kitchen Surface Microbiology


text: CCME-COLORADO

text: public

text: n

characteristic: collection date

text: ecological metagenome unclassified

characteristic: depth

text: NTC

characteristic: description

text: NTC

characteristic: elevation

text: ENVO:terrestrial biome

characteristic: env biome

text: ENVO:anthropogenic habitat

characteristic: env feature

text: ENVO:surface

characteristic: env matter

text: NTC

characteristic: genericdescription

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: NTC

characteristic: kitchen

characteristic: latitude

characteristic: longitude

text: metagenomes

characteristic: organism

text: y

text: cotton swab

text: metagenomes

characteristic: title

text: Kitchen Surface Microbiology


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: n

text: ecological metagenome unclassified

characteristic: common name

text: ENVO:terrestrial biome

text: ENVO:anthropogenic habitat

text: ENVO:surface

text: GAZ:United States of America

text: A

text: metagenomes

text: y

characteristic: public

text: cotton swab

characteristic: sample id

text: metagenomes

text: Kitchen Surface Microbiology


text: CCME-COLORADO

text: public

text: n

characteristic: collection date

text: ecological metagenome unclassified

characteristic: depth

characteristic: description

characteristic: elevation

text: ENVO:terrestrial biome

characteristic: env biome

text: ENVO:anthropogenic habitat

characteristic: env feature

text: ENVO:surface

characteristic: env matter

characteristic: genericdescription

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: A

characteristic: kitchen

characteristic: latitude

characteristic: longitude

text: metagenomes

text: y

text: cotton swab

characteristic: sample name

text: metagenomes

characteristic: taxon id

text: Kitchen Surface Microbiology


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: n

text: ecological metagenome unclassified

characteristic: common name

text: ENVO:terrestrial biome

text: ENVO:anthropogenic habitat

text: ENVO:surface

text: GAZ:United States of America

text: C

text: metagenomes

characteristic: organism

text: y

text: cotton swab

text: metagenomes

characteristic: title

text: Kitchen Surface Microbiology


text: CCME-COLORADO

text: public

text: n

characteristic: collection date

text: ecological metagenome unclassified

characteristic: depth

characteristic: description

characteristic: elevation

text: ENVO:terrestrial biome

characteristic: env biome

text: ENVO:anthropogenic habitat

characteristic: env feature

text: ENVO:surface

characteristic: env matter

characteristic: genericdescription

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: D

characteristic: kitchen

characteristic: latitude

characteristic: longitude

text: metagenomes

text: y

characteristic: public

text: cotton swab

characteristic: sample id

text: metagenomes

text: Kitchen Surface Microbiology


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: n

text: ecological metagenome unclassified

characteristic: common name

text: ENVO:terrestrial biome

text: ENVO:anthropogenic habitat

text: ENVO:surface

text: GAZ:United States of America

text: B

text: metagenomes

text: y

text: cotton swab

characteristic: sample name

text: metagenomes

characteristic: taxon id

text: Kitchen Surface Microbiology


text: CCME-COLORADO

text: public

text: n

characteristic: collection date

text: ecological metagenome unclassified

characteristic: depth

characteristic: description

characteristic: elevation

text: ENVO:terrestrial biome

characteristic: env biome

text: ENVO:anthropogenic habitat

characteristic: env feature

text: ENVO:surface

characteristic: env matter

text: Wall

characteristic: genericdescription

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: D

characteristic: kitchen

characteristic: latitude

characteristic: longitude

text: metagenomes

characteristic: organism

text: y

text: cotton swab

text: metagenomes

text: Kitchen Surface Microbiology

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: n

text: ecological metagenome unclassified

characteristic: common name

text: Faucet

text: Faucet

text: ENVO:terrestrial biome

text: ENVO:anthropogenic habitat

text: ENVO:surface

text: Faucet

text: GAZ:United States of America

text: B

text: metagenomes

text: y

characteristic: public

text: cotton swab

characteristic: sample id

text: metagenomes

text: Kitchen Surface Microbiology