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characteristic: geographic location (country and/or sea)

text: 152 deg 34 min East; 27 deg 31 min South

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text: DTFD Monozygotic Discordant Twins

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text: ST68 (BAPS cluster 14)

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text: public

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text: public

text: human

text: Homo sapiens

text: Homo sapiens

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text: public

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text: Jordan Kueneman

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characteristic: common name

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text: Lithobates catesbeianus_from_site_Manzanita

characteristic: description

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:sebum

characteristic: env matter

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: bullfrog

text: Lithobates catesbeianus

characteristic: host species

text: Lica

characteristic: latitude

characteristic: longitude

text: organismal metagenomes

characteristic: organism

characteristic: park

characteristic: ph

text: n

characteristic: public

characteristic: redox potential

text: NR

text: swab

characteristic: sample id

characteristic: sample name

text: Manzanita

characteristic: sample site

text: CA

characteristic: sample state

text: organismal metagenomes

characteristic: spcond

text: mS/cm

characteristic: taxon id

characteristic: temp

characteristic: title

text: The amphibian skin microbiome across species, space and life history stages

text: dipnet

characteristic: trap type


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1522:tp1.CI.E08.10.3MM2.0.Ln.TSDC17.2.A

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: human gut metagenome

characteristic: common name

characteristic: depth

characteristic: description

characteristic: elevation

text: ENVO:human-associated habitat

characteristic: env biome

text: ENVO:human-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: Mus musculus

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: human gut metagenome

text: n

text: human gut metagenome

characteristic: sex


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1523:tp1.Lean.DTFD.E01.7dpc.PM55

characteristic: Submitter Id

characteristic: altitude

text: y

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

characteristic: collection date

text: mouse gut metagenome

text: 16s time course analysis of fecal pellets collected from mice colonized with discordant twins microbiota

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: donor

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:feces

text: wild-type

characteristic: genotype

text: GAZ:United States of America

text: mouse

characteristic: latitude

characteristic: longitude

text: mouse gut metagenome

characteristic: organism

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: mouse gut metagenome

characteristic: taxon id

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: anonymized name

text: y

text: mouse gut metagenome

characteristic: common name

characteristic: depth

text: metatranscriptome of humanized mice

characteristic: description

text: metatranscriptome of humanized mice

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: laboratory mouse

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: mouse gut metagenome

text: n

text: 0.1, g

text: mouse gut metagenome

text: Metatranscriptome of mice humanized with the intact, unclutured or culture collection from twins discordant for obesity


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CCME-COLORADO

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1522:tp1.Obese.DTFD.E03.SI1.PM92

characteristic: Submitter Id

characteristic: altitude

text: y

text: UBERON:small intestine

characteristic: body habitat

text: UBERON:mucosa of small intestine

characteristic: body product

text: UBERON:mucosa of small intestine

characteristic: body site

characteristic: collection date

text: human gut metagenome

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:organic material feature

text: wild-type

characteristic: genotype

text: GAZ:United States of America

text: Mus musculus

characteristic: latitude

characteristic: longitude

text: human gut metagenome

characteristic: organism

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: human gut metagenome

characteristic: sex

characteristic: taxon id

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1452:fut2positive.day56.30.PSdef

characteristic: Submitter Id

text: n

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: PSdef

characteristic: chow

text: All samples collected between Sept. 2010 and Dec. 2011

text: mouse gut metagenome

characteristic: common name

characteristic: depth

text: WT mouse fecal sample

characteristic: description

text: WT mouse fecal sample

text: Regular chow/PS def

characteristic: elevation

text: ENVO:mammalia-associated habitat

characteristic: env biome

text: ENVO:mammalia-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: WT

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

characteristic: host subject id

text: mouse gut metagenome

text: n

text: .1, g

characteristic: sampling day

text: mouse gut metagenome


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

text: public

text: qiime_study_1522:tp1.Lean.CI.E01.Cultured.2dpc.CI16

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: human gut metagenome

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:feces

text: wild-type

characteristic: genotype

text: GAZ:United States of America

text: Mus musculus

characteristic: host common name

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: human gut metagenome

characteristic: organism

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: human gut metagenome

characteristic: sex

characteristic: taxon id

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characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1522:tp2.Lean.K02.HiSFLoFV.6dpc.A3.1

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

text: UBERON:feces

text: human gut metagenome

characteristic: common name

characteristic: depth

text: Mice_colonized_with_samples_from_discordant_twins_for_obeseity_and_fed_one_of_two_NHANES_based_diets

characteristic: description

text: HiSFLoFV

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: wild-type

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: Mus musculus

characteristic: host subject id

text: human gut metagenome

text: n

text: human gut metagenome


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: qiime_study_1522:tp1.CI.E08.LoSFHiFV.12dpc.Ln.B1

text: y

text: UBERON:feces

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: human gut metagenome

text: Mice_colonized_with_samples_from_discordant_twins_forobeseity

text: LoSFHiFV

characteristic: diet

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:feces

text: wild-type

characteristic: genotype

text: GAZ:United States of America

text: Mus musculus

characteristic: host common name

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: human gut metagenome

characteristic: organism

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: human gut metagenome

characteristic: sex

characteristic: taxon id

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: KIS

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: JKE


text: CCME-COLORADO

text: public

text: qiime_study_1523:tp1.Obese.DTFD.E03.1dpc.PM91

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: mouse gut metagenome

characteristic: depth

characteristic: description

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: donor

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: wild-type

characteristic: genotype

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: mouse

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: mouse gut metagenome

characteristic: organism

text: n

characteristic: public

characteristic: sample id

text: mouse gut metagenome

text: Cultured gut bacterial consortia from twins discordant for obesity modulate adiposity in gnotobiotic mice


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: human gut metagenome

characteristic: common name

characteristic: depth

text: CultureInitiativeExperiment.ArrayedInvasion

characteristic: description

text: LowFat-RichinPlantPolysaccharide Chow

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:feces

text: wild-type

text: GAZ:United States of America

text: Mus musculus

text: human gut metagenome

text: n

characteristic: sample name

text: human gut metagenome

characteristic: sex

characteristic: taxon id

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: qiime_study_1523:tp2.Lean.DTFD.E02.10dpc.PM77

text: y

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: mouse gut metagenome

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: donor

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: wild-type

characteristic: genotype

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: mouse

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: mouse gut metagenome

characteristic: organism

text: n

characteristic: public

characteristic: sample id

text: mouse gut metagenome


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Larva

characteristic: age group

characteristic: altitude

characteristic: anonymized name

text: n

text: UBERON:skin

characteristic: body habitat

text: UBERON:sebum

characteristic: body product

text: UBERON:skin of back

characteristic: body site

characteristic: collection date

text: Jordan Kueneman

characteristic: collector name

text: organismal metagenome

characteristic: common name

characteristic: depth

text: Taricha granulosa_from_site_Little Shimmy

characteristic: description

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:sebum

text: GAZ:United States of America

text: Newt

text: Taricha granulosa

characteristic: host species

text: Tagr

text: organismal metagenomes

text: Trinity

characteristic: park

text: Declining

characteristic: ph

text: n

characteristic: redox potential

text: NR

text: swab

characteristic: sample name

text: Little Shimmy

characteristic: sample site

text: CA

characteristic: sample state

text: organismal metagenomes

characteristic: spcond

text: mS/cm

characteristic: taxon id

characteristic: temp

characteristic: title

text: The amphibian skin microbiome across species, space and life history stages

text: dipnet

characteristic: trap type


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1522:tp2.Lean.K02.LoSFHiFV.7dpc.A9

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: human gut metagenome

text: LoSFHiFV

characteristic: diet

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: wild-type

characteristic: genotype

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: Mus musculus

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: human gut metagenome

characteristic: organism

text: n

characteristic: public

characteristic: sample id

text: human gut metagenome

characteristic: sex


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: BGI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: human gut

characteristic: environment (biome)

text: human-associated habitat

characteristic: environment (feature)

text: faeces

characteristic: environment (material)

text: human-gut

characteristic: environmental package

text: Denmark

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: human gut metagenome

text: MetaHIT-Richness

characteristic: project name

text: human gut metagenome

text: Illumina

characteristic: sequencing method

text: Stool sample from danish

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

text: public

text: qiime_study_1523:tp1.Lean.DTFD.E01.15dpc.PM65

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: mouse gut metagenome

characteristic: common name

characteristic: depth

text: 16s time course analysis of fecal pellets collected from mice colonized with discordant twins microbiota

characteristic: description

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: donor

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: wild-type

characteristic: genotype

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: mouse

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: mouse gut metagenome

characteristic: organism

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: mouse gut metagenome

characteristic: sex

characteristic: taxon id


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: WUSL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Low fat high plant polysacharides

characteristic: diet

text: host associated

characteristic: environment (biome)

text: gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: house mouse

text: metagenome

characteristic: investigation type

text: mouse gut metagenome

characteristic: project name

text: mouse gut metagenome

text: Illumina

characteristic: sequencing method

text: Mouse fecal sample for COPRO-Seq

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: qiime_study_1523:tp1.Lean.DTFD.E01.SI9.C.PM63

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:small intestine

characteristic: body habitat

text: UBERON:mucosa of small intestine

characteristic: body product

text: UBERON:mucosa of small intestine

characteristic: body site

text: mouse gut metagenome

characteristic: common name

characteristic: depth

text: alg SAMPLES FOR TWIN 16_17. cecum1.C sequenced with time course

characteristic: description

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: donor

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:organic material feature

characteristic: env matter

text: wild-type

characteristic: genotype

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: mouse

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: mouse gut metagenome

characteristic: organism

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: mouse gut metagenome

characteristic: sex

characteristic: taxon id


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VETMEDUNI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: pig

characteristic: common name

text: ileocaecal lymphnode

characteristic: description

text: Lymphnode

characteristic: environment (biome)

text: Pig

characteristic: environment (feature)

text: lymphatic tissue

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: Austria

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: Sus scrofa

text: lymphnode

characteristic: project name

text: Sus scrofa

text: pyrosequencing

characteristic: sequencing method

text: lymphnode

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: qiime_study_1523:tp4.Lean.DTFD.E02.Stomach.PM84

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:stomach

characteristic: body habitat

text: UBERON:mucosa of stomach

characteristic: body product

text: UBERON:mucosa of stomach

characteristic: body site

text: mouse gut metagenome

characteristic: depth

text: ALG samples for mice colonized with the Microbiota of co-twins discordant for obesity

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: donor

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:organic material feature

characteristic: env matter

text: wild-type

characteristic: genotype

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: mouse

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: mouse gut metagenome

characteristic: organism

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: mouse gut metagenome

characteristic: sex

characteristic: taxon id


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1522:tp1.CI.E03.11dpc.1Ob.12

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: human gut metagenome

characteristic: common name

characteristic: depth

characteristic: description

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: elevation

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:feces

text: wild-type

text: GAZ:United States of America

text: Mus musculus

text: human gut metagenome

text: n

text: human gut metagenome

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Sub-adult

characteristic: age group

text: n

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of back

text: Jordan Kueneman

characteristic: collector name

text: organismal metagenome

text: Rana cascadae_from_site_Found

text: Rana cascadae_from_site_Found

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:sebum

characteristic: env matter

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: Cascades Frog

characteristic: host common name

text: Rana cascadae

characteristic: host species

characteristic: host subject id

characteristic: host taxid

text: Raca

characteristic: latitude

characteristic: longitude

text: organismal metagenomes

characteristic: organism

text: Trinity

characteristic: park

text: Persisiting

characteristic: ph

text: n

characteristic: public

characteristic: redox potential

text: NR

text: swab

characteristic: sample id

characteristic: sample name

text: Found

characteristic: sample site

text: CA

characteristic: sample state

text: organismal metagenomes

characteristic: spcond

text: mS/cm

characteristic: taxon id

characteristic: temp

text: dipnet

characteristic: trap type


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1523:tp4.Obese.DTFD.E02.Cecum2.PM71

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:cecum

characteristic: body habitat

text: UBERON:cecum mucosa

characteristic: body product

text: UBERON:cecum mucosa

characteristic: body site

characteristic: collection date

text: mouse gut metagenome

characteristic: common name

characteristic: depth

characteristic: description

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: donor

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:organic material feature

characteristic: env matter

text: wild-type

characteristic: genotype

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: mouse

characteristic: host common name

characteristic: host subject id

text: mouse gut metagenome

text: n

text: mouse gut metagenome

characteristic: sex

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: n

characteristic: batch

text: compost metagenome

text: compost sample from Aerated Static Pile

text: compost sample from Aerated Static Pile

text: ENVO:cropland

text: ENVO:farm

text: ENVO:compost

text: Process through time

text: GAZ:United States of America

characteristic: latitude

characteristic: longitude

text: compost metagenome

characteristic: organism

text: y

characteristic: public

characteristic: sample id

characteristic: sample name

text: compost metagenome

text: Highfields Center for Composting, Hardwick, Vermont

characteristic: site description

characteristic: taxon id

text: compost microbiome

text: ASP

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: UMCU

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: Sample from omental metastasis 3 patient 1

characteristic: title


text: CCME-COLORADO

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1523:tp1.Lean.DTFD.E03.35dpc.PM96

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: mouse gut metagenome

characteristic: depth

text: Mice_colonized_with_samples_from_discordant_twins_forobeseity

characteristic: description

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: donor

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: wild-type

characteristic: genotype

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: mouse

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: mouse gut metagenome

text: n

text: mouse gut metagenome

characteristic: sex


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1522:tp1.Obese.CI.E01.Complete.1dpc.CI02

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: human gut metagenome

characteristic: common name

text: LowFat-RichinPlantPolysaccharide Chow

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:feces

text: wild-type

text: GAZ:United States of America

text: Mus musculus

text: human gut metagenome

characteristic: organism

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: human gut metagenome

characteristic: taxon id

text: Cultured gut bacterial consortia from twins discordant for obesity modulate adiposity in gnotobiotic mice

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: y

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human gut metagenome

characteristic: depth

text: CultureInitiativeExperiment.ArrayedInvasion

characteristic: description

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: wild-type

characteristic: genotype

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: Mus musculus

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: human gut metagenome

text: n

text: human gut metagenome

characteristic: sex


E-MTAB-1720:Control B

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Edinburgh

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-1720:Control B

tag: Namespace:University of Edinburgh

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: Protocols: Candida albicans (strain CAI4-CIp10) was grown in YPD-T (Tris buffered YPD: 2% w/v glucose, 2% w/v mycological peptone, 1% w/v yeast extract, 100 mM Tris.HCl, pH 7.4) to mid-exponential phase Cultures were split and exposed to stresses in fresh medium at an OD600 of 0.2. Biological triplicate cultures were processed After 10 min cells were flash frozen in liquid nitrogen and RNA was extracted using Qiazol (phenol/chloroform method). RNA was DNase treated using Ambion Turbo DNAfree kit before being sent for library preparation and sequencing. Libraries were prepared using standard Illumina RNAseq library preparation kit.

text: ura3::imm434/ura3::imm434 + CIp10

text: Candida albicans

characteristic: organism

text: Candida albicans

text: Candida albicans

text: frozen specimen

characteristic: specimen with known storage state

characteristic: strain

text: Control B

characteristic: title


characteristic: ENA-CHECKLIST

text: CCME-COLORADO

characteristic: INSDC last update

text: public

characteristic: age

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: Yes

text: n

characteristic: body mass index

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: cohort

characteristic: collection date

characteristic: depth

characteristic: description

characteristic: elevation

text: ENVO:human-associated habitat

characteristic: env biome

text: ENVO:human-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

characteristic: height or length

text: Positive

characteristic: hiv

characteristic: host subject id

text: MiSeq

text: human gut metagenome

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: human gut metagenome

text: acute

characteristic: status

characteristic: taxon id

text: The bacterial composition of fecal samples in HIV negative and positive individuals

text: untreated

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UWS

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Plant species: Carrichtera annua

characteristic: environment (biome)

text: Pots inoculated with soil extracts from under Retama sphaerocarpa shrubs (RI)

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: soil

characteristic: environmental package

text: Spain

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: soil metagenome

characteristic: organism

text: retama

characteristic: project name

text: soil metagenome

text: pyrosequencing

characteristic: sequencing method

text: Carrichtera annua inoculated with soil from Retama understory

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: WUSL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: B. cellulosilyticus WH2 sample from in vitro induction experiment

characteristic: description

text: metagenome

text: Bacteroides cellulosilyticus

text: Bacteroides cellulosilyticus

text: Illumina

characteristic: strain

text: B. cellulosilyticus phage induction


text: CCME-COLORADO

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: human gut metagenome

characteristic: common name

characteristic: depth

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: wild-type

characteristic: genotype

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: Mus musculus

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: human gut metagenome

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: human gut metagenome

characteristic: sex

characteristic: taxon id


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1522:tp1.CI.E08.LoSFHiFV.3dpc.Ob.A14

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: human gut metagenome

characteristic: common name

characteristic: depth

characteristic: description

text: LoSFHiFV

characteristic: diet

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:feces

text: wild-type

text: GAZ:United States of America

text: Mus musculus

text: human gut metagenome

characteristic: organism

text: n

text: human gut metagenome

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: UMCU

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Sample from muscle biopsy patient 3 (control)


text: CCME-COLORADO

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1522:tp2.Lean.K02.HiSFLoFV.3dpc.A14

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

text: UBERON:feces

text: human gut metagenome

text: Mice_colonized_with_samples_from_discordant_twins_for_obeseity_and_fed_one_of_two_NHANES_based_diets

text: HiSFLoFV

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: wild-type

characteristic: genotype

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: Mus musculus

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: human gut metagenome

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: human gut metagenome

characteristic: sex

characteristic: taxon id


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1522:tp2.Lean.DTFD.E04.3dpc.E16

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: human gut metagenome

characteristic: common name

characteristic: depth

characteristic: description

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:feces

text: wild-type

text: GAZ:United States of America

text: Mus musculus

text: human gut metagenome

characteristic: organism

text: n

text: human gut metagenome

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: WUSL

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Low fat high plant polysacharides

text: host associated

characteristic: environment (biome)

text: gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: house mouse

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: metagenome

characteristic: investigation type

text: mouse gut metagenome

characteristic: project name

text: mouse gut metagenome

text: Illumina

characteristic: sequencing method

text: Mouse fecal sample for COPRO-Seq


characteristic: ENA-FIRST-PUBLIC

text: CCME-COLORADO

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1523:tp1.Obese.DTFD.E01.Col2.PM60

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:colon

characteristic: body habitat

text: UBERON:colonic mucosa

characteristic: body product

text: UBERON:colonic mucosa

characteristic: body site

characteristic: collection date

text: mouse gut metagenome

characteristic: common name

characteristic: depth

text: ALG redos TSDC 16 &17

characteristic: description

text: ALG redos TSDC 16 &17

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: donor

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:organic material feature

characteristic: env matter

text: wild-type

characteristic: genotype

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: mouse

characteristic: latitude

characteristic: longitude

text: mouse gut metagenome

characteristic: organism

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: mouse gut metagenome

characteristic: sex

characteristic: taxon id

characteristic: title