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characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: wild-type

characteristic: genotype

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: Mus musculus

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: human gut metagenome

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: human gut metagenome

characteristic: sex

characteristic: taxon id


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1452:fut2positive.day28.47.Regular

characteristic: Submitter Id

characteristic: altitude

text: n

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: Regular

characteristic: chow

text: All samples collected between Sept. 2010 and Dec. 2011

text: mouse gut metagenome

characteristic: common name

characteristic: depth

text: WT mouse fecal sample

characteristic: description

text: WT mouse fecal sample

text: Regular chow/PS def

text: ENVO:mammalia-associated habitat

text: ENVO:mammalia-associated habitat

text: ENVO:feces

text: WT

text: GAZ:United States of America

text: mouse gut metagenome

characteristic: organism

text: n

text: .1, g

characteristic: sampling day

text: mouse gut metagenome

characteristic: title


E-MTAB-1720:XS+NS C

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Edinburgh

characteristic: INSDC center name

text: public

text: E-MTAB-1720:XS+NS C

tag: Namespace:University of Edinburgh

text: ArrayExpress

characteristic: broker name

text: Protocols: Candida albicans (strain CAI4-CIp10) was grown in YPD-T (Tris buffered YPD: 2% w/v glucose, 2% w/v mycological peptone, 1% w/v yeast extract, 100 mM Tris.HCl, pH 7.4) to mid-exponential phase Cultures were split and exposed to stresses in fresh medium at an OD600 of 0.2. Biological triplicate cultures were processed After 10 min cells were flash frozen in liquid nitrogen and RNA was extracted using Qiazol (phenol/chloroform method). RNA was DNase treated using Ambion Turbo DNAfree kit before being sent for library preparation and sequencing. Libraries were prepared using standard Illumina RNAseq library preparation kit.

text: ura3::imm434/ura3::imm434 + CIp29

characteristic: genotype

text: Candida albicans

text: Candida albicans

text: Candida albicans

text: frozen specimen

characteristic: specimen with known storage state

characteristic: strain

text: XS+NS C


text: CCME-COLORADO

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1522:tp1.GermFree.Cohoused.CI.E02.10dpc.F15

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: collection date

text: human gut metagenome

text: CultureInitiativeExperiment.BattleRoyale

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: wild-type

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: Mus musculus

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: human gut metagenome

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: human gut metagenome

characteristic: sex

characteristic: taxon id


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1522:tp2.Obese.K02.FREE.PTS4002.3B

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: human gut metagenome

characteristic: common name

characteristic: depth

text: Mice_colonized_with_samples_from_discordant_twins_for_obeseity_and_fed_one_of_two_NHANES_based_diets

characteristic: description

text: ENVO:human-associated habitat

text: ENVO:human-associated habitat

text: ENVO:feces

text: GAZ:United States of America

text: Mus musculus

text: human gut metagenome

characteristic: organism

text: n

text: human gut metagenome

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: WUSL

text: public

characteristic: collection date

text: Low fat high plant polysacharides

characteristic: diet

text: host associated

characteristic: environment (biome)

text: gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: house mouse

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: metagenome

characteristic: investigation type

text: mouse gut metagenome

characteristic: project name

text: mouse gut metagenome

text: Illumina

characteristic: sequencing method

text: Mouse fecal sample for COPRO-Seq


characteristic: ENA-FIRST-PUBLIC

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1522:tp2.Lean.K02.LoSFHiFV.6dpc.A3

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: human gut metagenome

characteristic: common name

characteristic: depth

characteristic: description

text: LoSFHiFV

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: wild-type

characteristic: genotype

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: Mus musculus

characteristic: latitude

characteristic: longitude

text: human gut metagenome

characteristic: organism

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: human gut metagenome

characteristic: sex

characteristic: taxon id

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: n

text: Mice ceca

text: UBERON:cecum

characteristic: body habitat

text: UBERON:cecum

characteristic: body product

characteristic: depth

text: fecal samples from mice colonized with the unculture collection from DZ twin pair 2

characteristic: donor

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:organic material feature

text: GAZ:United States of America

characteristic: host subject id

characteristic: host taxid

text: gut metagenome

text: n

text: gut metagenome

text: Titanium

characteristic: sequencing technology

text: Cecal micro biome of mice humanized with the uncultured and cultured microbiota from twins discordant for obesity


Sample 1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

text: USTAND

text: public

text: Sample 1

text: Sulfolobus solfataricus P2

characteristic: organism

text: Sulfolobus solfataricus P2

text: crRNA from CSM complex

characteristic: title


characteristic: External Id

text: BGI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

text: human gut

characteristic: environment (biome)

text: human-associated habitat

characteristic: environment (feature)

text: faeces

characteristic: environment (material)

text: human-gut

characteristic: environmental package

text: Denmark

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: human gut metagenome

text: MetaHIT-Richness

characteristic: project name

text: human gut metagenome

text: Illumina

characteristic: sequencing method

text: Stool sample from danish


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CCME-COLORADO

text: public

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: n

text: compost metagenome

characteristic: common name

characteristic: depth

text: compost sample from Hardwood compost control

characteristic: description

characteristic: elevation

text: ENVO:cropland

characteristic: env biome

text: ENVO:farm

characteristic: env feature

text: ENVO:compost

characteristic: env matter

text: Recipe

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

characteristic: latitude

characteristic: longitude

text: compost metagenome

characteristic: organism

text: y

characteristic: public

characteristic: sample id

characteristic: sample name

text: compost metagenome

text: Riverside Farms, E. Hardwick, Vermont

characteristic: site description

characteristic: taxon id

text: compost microbiome

characteristic: title

text: HW

characteristic: treatment


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1522:tp1.Lean.CI.E01.Complete.1dpc.CI10

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: human gut metagenome

characteristic: common name

characteristic: depth

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:feces

text: wild-type

characteristic: genotype

text: GAZ:United States of America

text: Mus musculus

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: human gut metagenome

text: n

text: human gut metagenome

characteristic: sex

text: Cultured gut bacterial consortia from twins discordant for obesity modulate adiposity in gnotobiotic mice


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: CNB/CSIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: CAACGCGAAGAACCTTACC,CGACAGCCATGCANCACCT

characteristic: adapters

text: Untreated soil, first sampling time

characteristic: description

text: agricultural rhizosphere

characteristic: environment (biome)

text: agricultural soil

characteristic: environment (feature)

text: rhizosphere

characteristic: environment (material)

text: soil

characteristic: environmental package

text: Spain

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: ACGCTCGACA

characteristic: multiplex identifiers

text: Zea mays

characteristic: organism

characteristic: pooling of DNA extracts (ifdone)

text: Herbicide effects on maize rhizobacteria

characteristic: project name

text: Zea mays

text: pyrosequencing

characteristic: sequencing method

text: V6 on 16S rRNA

characteristic: target subfragment

text: Untreated soil T1

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1523:tp1.Obese.DTFD.E03.17dpc.PM91

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: mouse gut metagenome

characteristic: common name

characteristic: depth

text: Mice_colonized_with_samples_from_discordant_twins_forobeseity

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: donor

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: wild-type

characteristic: genotype

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: mouse

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: mouse gut metagenome

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: mouse gut metagenome

characteristic: sex

characteristic: taxon id


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

text: Miller Prairie, MN

characteristic: anonymized name

text: n

characteristic: collection date

text: soil metagenome

characteristic: common name

characteristic: depth

text: NTP32, Miller Prairie, MN

characteristic: description

text: NTP32, Miller Prairie, MN

text: ENVO:temperate grasslands

text: ENVO:prairie

text: ENVO:soil

text: y

characteristic: extracted DNA avail now

text: GAZ:United States of America

text: soil metagenome

characteristic: organism

characteristic: ph

text: y

characteristic: physical samp avail now

text: y

text: CIRES

characteristic: sample location

text: soil metagenome

text: Sandy Loam/Loam

characteristic: texture

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: y

text: mouse gut metagenome

text: metatranscriptome of humanized mice

text: metatranscriptome of humanized mice

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: laboratory mouse

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: mouse gut metagenome

text: n

characteristic: public

text: 0.1, g

characteristic: sample id

characteristic: sample name

text: mouse gut metagenome

characteristic: taxon id

text: Metatranscriptome of mice humanized with the intact, unclutured or culture collection from twins discordant for obesity


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1523:tp1.Lean.DTFD.E01.SI13.C.PM56

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:small intestine

characteristic: body habitat

text: UBERON:mucosa of small intestine

characteristic: body product

text: UBERON:mucosa of small intestine

characteristic: body site

characteristic: collection date

text: mouse gut metagenome

characteristic: common name

characteristic: depth

text: alg SAMPLES FOR TWIN 16_17. cecum1.C sequenced with time course

characteristic: description

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: donor

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:organic material feature

text: wild-type

characteristic: genotype

text: GAZ:United States of America

text: mouse

text: mouse gut metagenome

characteristic: organism

text: n

text: mouse gut metagenome

characteristic: sex

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1522:tp2.Obese.K02.LoSFHiFV.3dpc.B10

text: y

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human gut metagenome

text: LoSFHiFV

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: wild-type

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: Mus musculus

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: human gut metagenome

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: human gut metagenome

characteristic: taxon id


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: qiime_study_1522:tp2.Lean.K02.HiSFLoFV.16dpc.A3.1

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: human gut metagenome

characteristic: common name

characteristic: depth

characteristic: description

text: HiSFLoFV

characteristic: diet

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:feces

text: wild-type

characteristic: genotype

text: GAZ:United States of America

text: Mus musculus

text: human gut metagenome

characteristic: organism

text: n

text: human gut metagenome

characteristic: sex

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: WUSL

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: B. cellulosilyticus WH2 sample from in vitro induction experiment

text: metagenome

characteristic: investigation type

text: Bacteroides cellulosilyticus

characteristic: project name

text: Bacteroides cellulosilyticus

text: Illumina

characteristic: sequencing method

characteristic: strain

text: B. cellulosilyticus phage induction


text: CCME-COLORADO

characteristic: INSDC last update

text: public

text: qiime_study_1522:tp1.Lean.Cohoused.CI.E02.Stomach.D3

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:stomach

characteristic: body habitat

text: UBERON:mucosa of stomach

characteristic: body product

text: UBERON:mucosa of stomach

characteristic: body site

characteristic: collection date

text: human gut metagenome

characteristic: common name

characteristic: depth

text: CultureInitiativeExperiment.BattleRoyale

characteristic: description

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:organic material feature

characteristic: env matter

text: wild-type

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: Mus musculus

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: human gut metagenome

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: human gut metagenome

characteristic: taxon id


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: human gut metagenome

characteristic: common name

characteristic: depth

text: CultureInitiativeExperiment.ArrayedInvasion

text: LowFat-RichinPlantPolysaccharide Chow

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:feces

text: wild-type

characteristic: genotype

text: GAZ:United States of America

text: Mus musculus

text: human gut metagenome

characteristic: organism

text: n

text: human gut metagenome

characteristic: sex

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Sub-adult

characteristic: age group

text: n

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of back

text: Jordan Kueneman

characteristic: collector name

text: organismal metagenome

text: Pseudacris regilla_from_site_No Talk

characteristic: description

text: Pseudacris regilla_from_site_No Talk

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:sebum

characteristic: env matter

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: Pacific treefrog

characteristic: host common name

text: Pseudacris regilla

characteristic: host species

characteristic: host subject id

characteristic: host taxid

text: Psre

characteristic: latitude

characteristic: longitude

text: organismal metagenomes

characteristic: park

characteristic: ph

text: n

characteristic: public

characteristic: redox potential

text: NR

text: swab

characteristic: sample id

characteristic: sample name

text: No Talk

characteristic: sample site

text: CA

characteristic: sample state

text: organismal metagenomes

characteristic: spcond

text: mS/cm

characteristic: taxon id

characteristic: temp

text: The amphibian skin microbiome across species, space and life history stages

text: dipnet

characteristic: trap type


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1522:tp1.Lean.CI.E01.Complete.3dpc.CI07

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: human gut metagenome

characteristic: common name

characteristic: depth

characteristic: description

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: wild-type

characteristic: genotype

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: Mus musculus

characteristic: host common name

text: human gut metagenome

characteristic: organism

text: n

text: human gut metagenome

characteristic: sex

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

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characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

characteristic: collection date

text: mouse gut metagenome

characteristic: common name

characteristic: depth

text: metatranscriptome of humanized mice

characteristic: description

text: metatranscriptome of humanized mice

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:feces

text: GAZ:United States of America

text: laboratory mouse

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: mouse gut metagenome

text: n

text: 0.1, g

text: mouse gut metagenome

text: Metatranscriptome of mice humanized with the intact, unclutured or culture collection from twins discordant for obesity


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: CCME-COLORADO

characteristic: INSDC last update

text: public

characteristic: age unit

text: n

characteristic: elevation

text: ENVO:sterile water

characteristic: env biome

text: ENVO:sterile water

characteristic: env feature

text: ENVO:sterile water

characteristic: env matter

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: MiSeq

characteristic: latitude

characteristic: longitude

text: human gut metagenome

characteristic: organism

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: human gut metagenome

characteristic: taxon id

characteristic: title

text: The bacterial composition of fecal samples in HIV negative and positive individuals


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: n

characteristic: collection date

text: compost metagenome

characteristic: common name

characteristic: depth

text: compost sample from Hay compost control

characteristic: description

text: compost sample from Hay compost control

text: ENVO:cropland

text: ENVO:farm

text: ENVO:compost

text: Recipe

text: GAZ:United States of America

text: compost metagenome

text: y

text: compost metagenome

text: Intervale Community Farms, Burlington, Vermont

characteristic: site description

text: compost microbiome

text: H

characteristic: treatment


characteristic: ENA-FIRST-PUBLIC

text: CCME-COLORADO

characteristic: INSDC last update

text: public

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: human gut metagenome

text: CultureInitiativeExperiment.ArrayedInvasion

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: wild-type

characteristic: genotype

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: Mus musculus

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: human gut metagenome

characteristic: organism

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: human gut metagenome

characteristic: sex

characteristic: taxon id

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1522:tp1.CI.E03.1dpc.3Ln37.6

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: human gut metagenome

characteristic: common name

characteristic: depth

characteristic: description

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

text: ENVO:feces

text: wild-type

text: GAZ:United States of America

text: Mus musculus

text: human gut metagenome

text: n

text: human gut metagenome


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: qiime_study_1522:tp1.CI.E03.Cecadpc.1Ln.2

text: y

text: UBERON:cecum

text: UBERON:cecum mucosa

text: UBERON:cecum mucosa

text: human gut metagenome

text: LowFat-RichinPlantPolysaccharide Chow

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:organic material feature

characteristic: env matter

text: wild-type

characteristic: genotype

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: Mus musculus

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: human gut metagenome

characteristic: organism

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: human gut metagenome

characteristic: sex

characteristic: taxon id

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: No

text: n

characteristic: body mass index

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: B

characteristic: cohort

characteristic: collection date

characteristic: depth

characteristic: description

characteristic: elevation

text: ENVO:human-associated habitat

characteristic: env biome

text: ENVO:human-associated habitat

text: ENVO:feces

text: GAZ:United States of America

text: Positive

characteristic: hiv

text: MiSeq

text: human gut metagenome

text: n

text: human gut metagenome

text: Chronic

characteristic: status

text: untreated

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: BGI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human gut

characteristic: environment (biome)

text: human-associated habitat

characteristic: environment (feature)

text: faeces

characteristic: environment (material)

text: human-gut

characteristic: environmental package

text: Denmark

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: human gut metagenome

characteristic: organism

text: MetaHIT-Richness

characteristic: project name

text: human gut metagenome

text: Illumina

characteristic: sequencing method

text: Stool sample from danish

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

characteristic: collection date

characteristic: lat lon

text: viral metagenome

text: viral metagenome

text: Comparison of PolB and MCP6 to study Prasinovirus diversity


text: CCME-COLORADO

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1522:tp2.Lean.K02.LoSFHiFV.7dpc.A11

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: human gut metagenome

characteristic: common name

characteristic: depth

characteristic: description

text: LoSFHiFV

characteristic: diet

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: wild-type

characteristic: genotype

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: Mus musculus

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: human gut metagenome

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: human gut metagenome

characteristic: sex

characteristic: taxon id


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1522:tp2.Lean.DTFD.E04.6dpc.E13

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: human gut metagenome

characteristic: common name

characteristic: depth

characteristic: description

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:feces

text: wild-type

text: GAZ:United States of America

text: Mus musculus

text: human gut metagenome

characteristic: organism

text: n

text: human gut metagenome

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: qiime_study_1522:tp1.CI.E08.LoSFHiFV.5dpc.Ob.A4

text: y

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human gut metagenome

text: Mice_colonized_with_samples_from_discordant_twins_forobeseity

text: LoSFHiFV

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: wild-type

characteristic: genotype

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: Mus musculus

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: human gut metagenome

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: human gut metagenome

characteristic: sex

characteristic: taxon id


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1522:tp1.Lean.CI.E01.Cultured.2dpc.CI20

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: human gut metagenome

characteristic: common name

characteristic: depth

characteristic: description

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:feces

text: wild-type

text: GAZ:United States of America

text: Mus musculus

text: human gut metagenome

characteristic: organism

text: n

text: human gut metagenome

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: qiime_study_1522:tp2.Obese.DTFD.E04.14dpc.F4

text: y

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human gut metagenome

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: wild-type

characteristic: genotype

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: Mus musculus

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: human gut metagenome

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: human gut metagenome

characteristic: sex

characteristic: taxon id


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1522:tp2.Lean.K02.HiSFLoFV.3dpc.A3.1

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: human gut metagenome

characteristic: common name

characteristic: depth

characteristic: description

text: HiSFLoFV

characteristic: diet

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:feces

text: wild-type

text: GAZ:United States of America

text: Mus musculus

text: human gut metagenome

characteristic: organism

text: n

text: human gut metagenome

characteristic: title

text: Cultured gut bacterial consortia from twins discordant for obesity modulate adiposity in gnotobiotic mice


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: WUSL

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Low fat high plant polysacharides

text: host associated

characteristic: environment (biome)

text: gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: house mouse

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: metagenome

characteristic: investigation type

text: mouse gut metagenome

characteristic: project name

text: mouse gut metagenome

text: 454 FLX titanium

characteristic: sequencing method

text: Mouse fecal sample for VLP-purification and 454 Sequencing


characteristic: ENA-FIRST-PUBLIC

text: CCME-COLORADO

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1523:tp1.Lean.DTFD.E01.Col2.C.PM55

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:colon

characteristic: body habitat

text: UBERON:colonic mucosa

characteristic: body product

text: UBERON:colonic mucosa

characteristic: body site

characteristic: collection date

text: mouse gut metagenome

characteristic: common name

characteristic: depth

text: ALG redos TSDC 16 &17

characteristic: description

text: ALG redos TSDC 16 &17

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

characteristic: donor

characteristic: elevation

text: ENVO:animal-associated habitat

characteristic: env biome

text: ENVO:animal-associated habitat

characteristic: env feature

text: ENVO:organic material feature

characteristic: env matter

text: wild-type

characteristic: genotype

text: GAZ:United States of America

characteristic: geographic location (country and/or sea)

text: mouse

characteristic: latitude

characteristic: longitude

text: mouse gut metagenome

characteristic: organism

text: n

characteristic: public

characteristic: sample id

characteristic: sample name

text: mouse gut metagenome

characteristic: sex

characteristic: taxon id

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCME-COLORADO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiime_study_1522:tp1.Obese.CI.E01.Cultured.15dpc.CI14

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: y

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: collection date

text: human gut metagenome

characteristic: common name

characteristic: depth

characteristic: description

text: LowFat-RichinPlantPolysaccharide Chow

characteristic: diet

text: ENVO:animal-associated habitat

text: ENVO:animal-associated habitat

text: ENVO:feces

text: wild-type

text: GAZ:United States of America

text: Mus musculus

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: human gut metagenome

text: n

text: human gut metagenome