characteristic: External Id

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characteristic: INSDC center name

text: public

characteristic: Submitter Id

characteristic: age

text: days

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: False

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

text: UBERON:feces

text: Not collected

text: not collected

text: mouse gut metagenome

text: not collected

text: not collected

text: GAZ:United States of America

text: Mouse503.Day.15 SHC-MVAC

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: True

text: not collected

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: feces

characteristic: env matter

text: human-gut

characteristic: env package

text: feces

text: mouse

text: SHC-MVAC

text: True

text: mouse gut metagenome

text: not collected

text: True

text: CCME

text: False

text: not collected

text: not collected

text: True

text: not collected

text: CU Boulder

text: Stool

text: sequenced (16S)

text: mouse gut metagenome

text: not collected

text: not collected

text: True

text: grams

text: not collected


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: days

text: False

text: UBERON:feces

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: bodyweight g

characteristic: collection day

text: mouse gut metagenome

characteristic: common name

text: GAZ:United States of America

characteristic: country

characteristic: depth

text: Mouse503.Day.20 SHC-MVAC

characteristic: description

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: True

text: not collected

characteristic: elevation

text: urban biome

text: animal-associated habitat

text: feces

text: human-gut

text: feces

text: mouse

text: SHC-MVAC

text: True

text: mouse gut metagenome

text: True

text: CCME

text: False

text: True

text: CU Boulder

text: Stool

text: sequenced (16S)

text: mouse gut metagenome

text: True

text: Effect of M. vaccae exposure on a model of acute stress in mice

text: grams


characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

characteristic: Submitter Id

characteristic: age

text: days

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: False

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

text: UBERON:feces

text: Not collected

text: not collected

text: mouse gut metagenome

text: not collected

text: not collected

text: GAZ:United States of America

text: Mouse504.Day.-14 SHC-MVAC

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: True

text: not collected

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: feces

characteristic: env matter

text: human-gut

characteristic: env package

text: feces

text: mouse

text: SHC-MVAC

text: True

text: mouse gut metagenome

text: not collected

text: True

text: CCME

text: False

text: not collected

text: not collected

text: True

text: not collected

text: CU Boulder

text: Stool

text: sequenced (16S)

text: mouse gut metagenome

text: not collected

text: not collected

text: False

text: grams

text: not collected


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: days

text: False

text: UBERON:feces

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: Not collected

characteristic: bodyweight g

text: not collected

characteristic: collection day

text: mouse gut metagenome

characteristic: common name

text: not collected

text: not collected

text: GAZ:United States of America

text: Mouse504.Day.-7 SHC-MVAC

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: True

text: not collected

text: urban biome

text: animal-associated habitat

text: feces

text: human-gut

text: feces

text: mouse

text: SHC-MVAC

text: True

text: mouse gut metagenome

text: not collected

text: True

text: CCME

text: False

text: not collected

text: not collected

text: True

text: not collected

text: CU Boulder

text: Stool

text: sequenced (16S)

text: mouse gut metagenome

text: not collected

text: not collected

text: False

text: grams

text: not collected


characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

characteristic: Submitter Id

characteristic: age

text: days

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: False

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

text: UBERON:feces

text: Not collected

text: not collected

text: mouse gut metagenome

text: not collected

text: not collected

text: GAZ:United States of America

characteristic: country

characteristic: depth

text: Mouse504.Day.1 SHC-MVAC

characteristic: description

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: True

text: not collected

characteristic: elevation

text: urban biome

text: animal-associated habitat

text: feces

text: human-gut

text: feces

text: mouse

text: SHC-MVAC

text: True

text: mouse gut metagenome

text: not collected

text: True

text: CCME

text: False

text: not collected

text: not collected

text: True

text: not collected

text: CU Boulder

text: Stool

text: sequenced (16S)

text: mouse gut metagenome

text: not collected

text: not collected

text: False

text: grams

text: not collected


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: days

text: False

text: UBERON:feces

text: UBERON:feces

characteristic: body product

text: UBERON:feces

text: Not collected

text: not collected

text: mouse gut metagenome

text: not collected

text: not collected

text: GAZ:United States of America

text: Mouse504.Day.8 SHC-MVAC

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: True

text: not collected

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: feces

characteristic: env matter

text: human-gut

characteristic: env package

text: feces

text: mouse

text: SHC-MVAC

text: True

text: mouse gut metagenome

text: not collected

text: True

text: CCME

text: False

text: not collected

text: not collected

text: True

text: not collected

text: CU Boulder

text: Stool

text: sequenced (16S)

text: mouse gut metagenome

text: not collected

text: not collected

text: False

text: grams

text: not collected


characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

characteristic: Submitter Id

characteristic: age

text: days

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: False

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

text: UBERON:feces

characteristic: body site

text: Not collected

characteristic: bodyweight g

text: not collected

characteristic: collection day

text: mouse gut metagenome

characteristic: common name

text: not collected

text: not collected

text: GAZ:United States of America

text: Mouse504.Day.15 SHC-MVAC

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: True

text: not collected

text: urban biome

text: animal-associated habitat

text: feces

text: human-gut

text: feces

text: mouse

text: SHC-MVAC

text: True

text: mouse gut metagenome

text: not collected

text: True

text: CCME

text: False

text: not collected

text: not collected

text: True

text: not collected

text: CU Boulder

text: Stool

text: sequenced (16S)

text: mouse gut metagenome

text: not collected

text: not collected

text: True

text: grams

text: not collected


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: days

text: False

text: UBERON:feces

text: UBERON:feces

characteristic: body product

text: UBERON:feces

text: mouse gut metagenome

text: GAZ:United States of America

characteristic: country

characteristic: depth

text: Mouse504.Day.20 SHC-MVAC

characteristic: description

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: True

text: not collected

characteristic: elevation

text: urban biome

text: animal-associated habitat

text: feces

text: human-gut

text: feces

text: mouse

text: SHC-MVAC

text: True

text: mouse gut metagenome

text: True

text: CCME

text: False

text: True

text: CU Boulder

text: Stool

text: sequenced (16S)

text: mouse gut metagenome

text: True

text: grams


characteristic: External Id

text: IMPERIAL COLLEGE LONDON

characteristic: INSDC center name

text: public

tag: Namespace:IMPERIAL COLLEGE LONDON

characteristic: Submitter Id

text: Cryptococcus neoformans

characteristic: organism

text: Cryptococcus neoformans

text: Zambian Cng Isolate

characteristic: title

type: has member


characteristic: ENA-CHECKLIST

text: public

tag: Namespace:INSTITUTE OF BIOPHYSICS, ACADEMY OF SCIENCES OF THE CZECH REPUBLIC, V.V.I.

text: tomato

characteristic: common name

text: Solanum lycopersicum

text: Solanum lycopersicum

text: SlARF8A amplicon


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: INSTITUTE OF BIOPHYSICS, ACADEMY OF SCIENCES OF THE CZECH REPUBLIC, V.V.I.

text: public

text: tomato

text: Solanum lycopersicum

text: Solanum lycopersicum

text: SlARF8A amplicon


characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: tomato

text: tRNA

text: Solanum lycopersicum

text: Solanum lycopersicum

text: SlARF8A amplicon


text: public

characteristic: INSDC status

characteristic: SRA accession

text: tomato

text: ribozyme

text: Solanum lycopersicum

text: Solanum lycopersicum

text: SlARF8A amplicon


text: public

text: tomato

text: non-transformed

text: Solanum lycopersicum

text: Solanum lycopersicum

text: SlARF8A amplicon


text: public

text: tomato

text: improved-gRNA

text: Solanum lycopersicum

text: Solanum lycopersicum

text: SlARF8A amplicon


text: IMPERIAL COLLEGE LONDON

text: public

text: Cryptococcus neoformans

text: Cryptococcus neoformans

text: Zambian ITS metabardcoding


text: CLM

text: public

text: gut microbiota without treatment sample 1

text: gut metagenome

text: gut metagenome

text: the effect of Sasa quelpaertensis leaf extract on gut microbiota


text: CLM

text: public

text: gut microbiota without treatment sample 2

text: gut metagenome

text: gut metagenome


text: CLM

text: public

text: gut microbiota without treatment sample 3

text: gut metagenome

text: gut metagenome


text: CLM

text: public

text: gut microbiota without treatment sample 4

text: gut metagenome

text: gut metagenome


text: CLM

text: public

text: gut microbiota without treatment sample 5

text: gut metagenome

text: gut metagenome


text: CLM

text: public

text: gut microbiota without treatment sample 6

text: gut metagenome

text: gut metagenome


text: CLM

text: public

text: gut microbiota with treatment of dextran sulfate sodium (DSS) sample 1

text: gut metagenome

text: gut metagenome


text: CLM

text: public

text: gut microbiota with treatment of dextran sulfate sodium (DSS) sample 2

text: gut metagenome

text: gut metagenome


text: CLM

text: public

text: gut microbiota with treatment of dextran sulfate sodium (DSS) sample 3

text: gut metagenome

text: gut metagenome


text: CLM

text: public

text: gut microbiota with treatment of dextran sulfate sodium (DSS) sample 4

text: gut metagenome

text: gut metagenome


text: CLM

text: public

text: gut microbiota with treatment of dextran sulfate sodium (DSS) sample 5

text: gut metagenome

text: gut metagenome


text: CLM

text: public

text: gut microbiota with treatment of dextran sulfate sodium (DSS) sample 6

text: gut metagenome

text: gut metagenome


text: CLM

text: public

text: gut microbiota with treatments of dextran sulfate sodium (DSS) and Sasa quelpaertensis leaf extract (SQE) sample 1

text: gut metagenome

text: gut metagenome


text: CLM

text: public

text: gut microbiota with treatments of dextran sulfate sodium (DSS) and Sasa quelpaertensis leaf extract (SQE) sample 2

text: gut metagenome

text: gut metagenome


text: CLM

text: public

text: gut microbiota with treatments of dextran sulfate sodium (DSS) and Sasa quelpaertensis leaf extract (SQE) sample 3

text: gut metagenome

text: gut metagenome


text: CLM

text: public

text: gut microbiota with treatments of dextran sulfate sodium (DSS) and Sasa quelpaertensis leaf extract (SQE) sample 4

text: gut metagenome

text: gut metagenome


text: CLM

text: public

text: gut microbiota with treatments of dextran sulfate sodium (DSS) and Sasa quelpaertensis leaf extract (SQE) sample 5

text: gut metagenome

text: gut metagenome


text: CLM

text: public

text: gut microbiota with treatments of dextran sulfate sodium (DSS) and Sasa quelpaertensis leaf extract (SQE) sample 6

text: gut metagenome

text: gut metagenome

text: the effect of Sasa quelpaertensis leaf extract on gut microbiota


text: Uni Goettingen

text: public

tag: Namespace:Uni Goettingen

characteristic: collection date

text: European beech

unit: m

text: RNA sequenced from ectomycorrhizal beech root samples

text: deciduous woodland

characteristic: environment (biome)

text: forest

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metatranscriptome

characteristic: investigation type

text: Fagus sylvatica

text: plant-associated

characteristic: plant-associated environmental package

text: Biodiversity Exploratories

characteristic: project name

text: Fagus sylvatica

text: Illumina

characteristic: sequencing method

text: Beech root and associated fungi


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: ROBERT KOCH INSTITUT

characteristic: INSDC center name

text: public

tag: Namespace:ROBERT KOCH INSTITUT

characteristic: Submitter Id

text: In-solution capture approach and post-capture pathogen enriched DNA was sequenced on an Illumina MiSeq. Bone of a Pan troglodytes verus.

characteristic: description

text: Treponema pallidum

characteristic: organism

text: Treponema pallidum

text: Treponema_pallidum_enriched_from_non-human_primate_bones

characteristic: title


characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH INSTITUT

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: a DNA microarray-based approach and post-capture pathogen enriched DNA was sequenced on an Illumina HiSeq 2500. Bone of a Pan troglodytes verus

text: Treponema pallidum

text: Treponema pallidum


text: ROBERT KOCH INSTITUT

text: public

text: a DNA microarray-based approach and post-capture pathogen enriched DNA was sequenced on an Illumina HiSeq 2500. Bone of a Pan troglodytes verus.

text: Treponema pallidum

text: Treponema pallidum


text: ROBERT KOCH INSTITUT

text: public

text: In-solution capture approach and post-capture pathogen enriched DNA was sequenced on an Illumina MiSeq. Bone of a Pan troglodytes verus

text: Treponema pallidum

text: Treponema pallidum


text: ROBERT KOCH INSTITUT

text: public

text: A DNA microarray-based approach and post-capture pathogen enriched DNA was sequenced on an Illumina HiSeq 2500. Bone of a Pan troglodytes verus

text: Treponema pallidum

text: Treponema pallidum


text: DUNDEE

text: public

text: Tb927.11.16920 was over expressed with 6 myc epitope tags.

text: BloodForm

characteristic: dev stage

text: Trypanosoma brucei brucei

text: Trypanosoma brucei brucei


text: EMBL

text: public

text: ArrayExpress

characteristic: broker name

text: fruit fly

characteristic: common name

text: Protocols: Collect virgins from the maternal line, crossing with the males collected from the paternal line. Keep the flies in small cages and feed on apple plates with yeast. Staged 2 hr populations of embryos were collected and aged at 25 degr till the required stage of development. The collected embryos were dechorionated using 50% bleach, rinsed with water, blotted dry and snap freeze in liquid nitrigen. The embryos are kept in -80 degr until use for RNA extraction. Total RNA extracted from frozen Drosophila embryos. Then use Oligo-dT beads to extract mRNA. Libraries were prepared following instructions of the NEBNext ultra directional RNA library prep kit for Illumina sequencing (NEB).

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: egg laying

characteristic: initial time point

text: Drosophila melanogaster

text: Drosophila melanogaster

text: Drosophila melanogaster

text: mixed sex

characteristic: sex

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: EMBL

characteristic: INSDC center name

text: public

text: E-MTAB-4694_2:QTLF1_m517p362_1012h_rep2_1

characteristic: Submitter Id

text: ArrayExpress

text: fruit fly

text: wild type genotype

text: egg laying

text: Drosophila melanogaster

text: Drosophila melanogaster

text: Drosophila melanogaster

text: mixed sex


characteristic: ENA-LAST-UPDATE

text: EMBL

characteristic: INSDC first public

text: public

text: E-MTAB-4694_2:QTLF1_m765p517_1012h_rep1_2

text: ArrayExpress

text: fruit fly

characteristic: description

text: wild type genotype

text: egg laying

text: Drosophila melanogaster

characteristic: organism

text: Drosophila melanogaster

text: Drosophila melanogaster

text: mixed sex

characteristic: title


text: EMBL

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-4694_2:QTLF1_m517p362_1012h_rep2_2

text: ArrayExpress

characteristic: broker name

text: fruit fly

text: wild type genotype

text: egg laying

text: Drosophila melanogaster

text: Drosophila melanogaster

text: Drosophila melanogaster

text: mixed sex


text: EMBL

text: public

text: E-MTAB-4694_2:QTLF1_m765p517_1012h_rep1_1

text: ArrayExpress

text: fruit fly

characteristic: common name

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: egg laying

characteristic: initial time point

text: Drosophila melanogaster

text: Drosophila melanogaster

text: Drosophila melanogaster

text: mixed sex


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ROBERT KOCH INSTITUT

text: public

text: In-solution capture approach and post-capture pathogen enriched DNA was sequenced on an Illumina MiSeq. Bone of a Pan troglodytes verus. Large number of reads split into two sets of paired reads.

text: Treponema pallidum

text: Treponema pallidum


characteristic: External Id

characteristic: INSDC center name

text: public

tag: Namespace:Department of Medical Microbiology, 2nd Faculty of Medicine, Charles University in Prague and Motol University Hospital

text: ArrayExpress

text: Protocols: Single colony isolate from cystic fibrosis patient Nextera XT DNA Library Preparation Kit

characteristic: isolate details

characteristic: isolation date

text: Burkholderia contaminans

text: Burkholderia contaminans

text: sputum

characteristic: sampling site

text: Burkholderia contaminans

characteristic: strain


characteristic: ENA-LAST-UPDATE

text: Department of Medical Microbiology, 2nd Faculty of Medicine, Charles University in Prague and Motol University Hospital

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: ArrayExpress

characteristic: description

text: Burkholderia contaminans

characteristic: organism

text: Burkholderia contaminans

text: blood culture

text: Burkholderia contaminans

characteristic: title


text: synthetic construct

characteristic: ArrayExpress-Species

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: synthetic construct

characteristic: common name

text: synthetic construct

text: synthetic construct


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UNIVERSITY OF SZEGED

text: public

tag: Namespace:UNIVERSITY OF SZEGED

text: PK-15 cell culture

characteristic: host

text: Department of Medical Biology, University of Szeged

characteristic: lab host

text: Suid herpesvirus 1 strain Kaplan

text: Suid herpesvirus 1 strain Kaplan

text: Long Read Sequencing of PRV


text: INRA (INRA Rennes)

characteristic: INSDC center name

text: public

tag: Namespace:INRA (INRA Rennes)

text: fall armyworm

text: larvae

characteristic: dev stage

text: Spodoptera frugiperda

text: Spodoptera frugiperda

text: male

characteristic: sex

text: rice

characteristic: strain

text: whole body

characteristic: tissue type

text: Rice variant


characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF BERN

characteristic: INSDC first public

text: public

tag: Namespace:UNIVERSITY OF BERN

characteristic: Submitter Id

characteristic: collection date

text: human

text: patient

characteristic: description

text: human body

characteristic: environment (biome)

text: gut

characteristic: environment (feature)

text: stool

characteristic: environment (material)

text: Switzerland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: Homo sapiens

characteristic: organism

text: The role of the gut metagenome on the development of age related macular degeneration

characteristic: project name

text: Homo sapiens

text: Illumina HiSeq 2000

characteristic: sequencing method

text: sequencing of human metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UNIVERSITY OF BERN

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: human

characteristic: common name

text: control

text: human body

text: gut

text: stool

text: Switzerland

text: human-gut

text: metagenome

text: Homo sapiens

text: Homo sapiens

text: Illumina HiSeq 2000

text: sequencing of human metagenome

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: INSDC first public

text: public

tag: Namespace:Department of Clinical and Experimental Medicine, Linkoping University

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: CD4-positive helper T cell

characteristic: cell type

text: human

text: Protocols: Primary naive CD4+T-cells were obtained from healthy blood donors using magnetic beads (MACS). Cells were cultured in RPMI-1640 under Th1 or Th2 polarizing conditions using plate-bound anti-CD3 and soluble anti-CD28 in the presence of IL-12 (5ng/mL), IL-2 (10ng/mL) and anti-IL4 (5μg/mL) or IL-4 (10ng/mL), IL-2 (10ng/mL), anti-IFNy (5μg/mL) and anti-IL12 (5μg/mL) up to 5 days for Th1 and Th2, respectively. Samples were collected for analysis at 0 (naive), 1 and 5 days post stimulation. Genomic DNA was extracted using an AllPrep DNA/RNA mini kit (Qiagen) DNA was fragmented by sonication using a Bioruptor (6 x 15min 30s on/off, Diagenode) then subjected to end-repair, dA-tailing, and adaptor-ligation using the NEBNext DNA Library Prep Master Mix Set for Illumina (New England Biolabs). Samples were hydroxymethylated DNA immuno-precipitated (hMeDIP) as previously described (Nestor et al., Genome Res 2012). Briefly, DNA was denatured and incubated with 1μg antibody against 5hmC (ActiveMotif; #39769) overnight at 4°C. IP and input DNA was prepared using magnetic beads (Dynabeads Protein G; Invitrogen) and amplified using NEBNext Multiplex Oligos for Illumina (New England Biolabs). Samples were separated by electrophoresis on a 2% low melting point agarose gel and fragments between 100 - 400 bp were selected. DNA was purified using the QIAquick Gel Extraction Kit (QIAGEN).

characteristic: description

text: BB

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens


characteristic: ENA-CHECKLIST

text: Department of Clinical and Experimental Medicine, Linkoping University

text: public

text: ArrayExpress

text: CD4-positive helper T cell

text: human

text: BB

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: public

text: ArrayExpress

text: CD4-positive helper T cell

text: human

text: BC

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens


text: Salmonella enterica subsp. enterica serovar Typhi str. Ty2

characteristic: ArrayExpress-Species

text: SC

characteristic: INSDC center name

characteristic: INSDC last update

text: public


text: Gallus gallus

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

text: chicken

characteristic: common name

text: Gallus gallus

text: Gallus gallus


Macadamia Int.1

characteristic: ENA-LAST-UPDATE

text: SOUTHERNCROSSPLANTSCIENCE

characteristic: INSDC first public

text: public

text: Macadamia Int.1

text: Macadamia integrifolia

text: Macadamia integrifolia

text: MacaInt

characteristic: title


Macadamia Int.2

text: SOUTHERNCROSSPLANTSCIENCE

text: public

text: Macadamia Int.2

characteristic: Submitter Id

text: Macadamia integrifolia

text: Macadamia integrifolia

text: MacaInt


Macadamia Int.3

text: SOUTHERNCROSSPLANTSCIENCE

text: public

text: Macadamia Int.3

text: Macadamia integrifolia

text: Macadamia integrifolia

text: MacaInt


Macadamia Int.4

text: SOUTHERNCROSSPLANTSCIENCE

text: public

text: Macadamia Int.4

text: Macadamia integrifolia

text: Macadamia integrifolia

text: MacaInt


text: MPIDEVBIO

text: public

text: not provided

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

text: not provided

characteristic: definition for seropositive sample

text: not provided

characteristic: description

text: Sweden

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: not provided

characteristic: geographic location (region and locality)

unit: centuries

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

characteristic: isolation source host associated

text: not provided

characteristic: isolation source non-host-associated

text: HIV-1 group M

characteristic: receipt date

text: HIV-1 group M

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VETAGROSUP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Escherichia coli O26:H11

characteristic: organism

text: Escherichia coli O26:H11

text: Replicate (1) EHEC O26:H11 21765 grown in ground beef with microflora

characteristic: title


text: male

characteristic: ArrayExpress-Sex

text: unidentified

characteristic: ArrayExpress-Species

text: SC

text: public

text: unidentified

characteristic: common name

text: unidentified

text: unidentified


text: female

text: unidentified

text: SC

text: public

text: unidentified

text: unidentified

text: unidentified


text: unidentified

text: SC

text: public

text: unidentified

text: unidentified

text: unidentified


text: CIDE

text: public

text: soil metagenome

text: soil metagenome

text: Burned plot


text: CIDE

text: public

text: soil metagenome

text: soil metagenome

text: Unburned plot


Parent

text: QMUL

text: public

text: Parent

text: European ash

text: This is the parent of the tree used in the WGS study. We sequenced RNA from four tissues of this tree: root, leaf, cambium and flower.

characteristic: description

text: Fraxinus excelsior

text: Fraxinus excelsior

text: Parent of 2451S


E-MTAB-4665:WEHI-231 BirA TP: 0h

text: public

text: E-MTAB-4665:WEHI-231 BirA TP: 0h

tag: Namespace:TRON Translationale Onkologie an der Universitatsmedizin der Johannes Gutenberg-Universitat Mainz gemeinnutzige GmbH

text: ArrayExpress

characteristic: broker name

text: WEHI-231 cell

characteristic: cell line

text: B cell

characteristic: cell type

text: house mouse

text: Protocols: Full length murine NFATc1/aA (gi:255759918 in NCBI database) and NFATc1/bC cDNAs (gi: 255759924) were amplified, fused to a bio/avidin-tag and ligated into the retroviral expression vector pEGZ. The retroviral pMSCV-F-BirA vector was purchased from BCCMTM/LMBP (Gent-Zwijnaarde, Belgium). Retroviral particles were obtained after transfection of retroviral vectors, along with the retroviral packaging plasmids pHIT60 and pHIT123, into HEK 293T cells. After infection, WEHI cells were kept under selective conditions (using zeocin or puromycin) for 14 d. Positive integration and expression of NFATc1/aA-bio, NFATc1/bC-bio and/or BirA constructs was determined by intracellular streptavidin-fluorophore labeling and flow cytometry. Qiagen RNeasy Mini Kit, cat # 70104, lot # 142343791, Qiagen, Elution volume 30 μl Input: 600 ng; Illumina TruSeq RNA Sample Prep Kit V2, lot # 8888761, 87440044, 8944022, 8679695; Purification with AMPure XP Beads Beckman Coulter Genomics, lot # 1398160; 12 PCR cycles; Elution in 30 μl

text: B cell lymphoma

characteristic: disease

text: E.coli enzyme BirA Ligase over expression

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: Mus musculus

unit: hour

characteristic: timepoint

text: WEHI-231 BirA TP: 0h


E-MTAB-4665:WEHI-231 BirA TP: 24h

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: TRON Translationale Onkologie an der Universitatsmedizin der Johannes Gutenberg-Universitat Mainz gemeinnutzige GmbH

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-4665:WEHI-231 BirA TP: 24h

text: ArrayExpress

text: WEHI-231 cell

text: B cell

text: house mouse

text: B cell lymphoma

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: WEHI-231 BirA TP: 24h


E-MTAB-4665:WEHI-231 BirA TP: 6h

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-4665:WEHI-231 BirA TP: 6h

characteristic: Submitter Id

text: ArrayExpress

text: WEHI-231 cell

text: B cell

text: house mouse

text: B cell lymphoma

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Mus musculus

text: WEHI-231 BirA TP: 6h

characteristic: title


E-MTAB-4665:WEHI-231 BirA TP: 96h

text: public

text: E-MTAB-4665:WEHI-231 BirA TP: 96h

text: ArrayExpress

characteristic: broker name

text: WEHI-231 cell

characteristic: cell line

text: B cell

text: house mouse

characteristic: common name

characteristic: description

text: B cell lymphoma

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: WEHI-231 BirA TP: 96h


E-MTAB-4665:WEHI-231 NFATc1aA TP: 0h

text: public

text: E-MTAB-4665:WEHI-231 NFATc1aA TP: 0h

text: ArrayExpress

text: WEHI-231 cell

text: B cell

characteristic: cell type

text: house mouse

text: B cell lymphoma

characteristic: disease

text: NFATc1aA over expression

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: Mus musculus

characteristic: timepoint

text: WEHI-231 NFATc1aA TP: 0h


E-MTAB-4665:WEHI-231 NFATc1aA TP: 24h

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-4665:WEHI-231 NFATc1aA TP: 24h

text: ArrayExpress

text: WEHI-231 cell

text: B cell

text: house mouse

text: B cell lymphoma

text: NFATc1aA over expression

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: WEHI-231 NFATc1aA TP: 24h


E-MTAB-4665:WEHI-231 NFATc1aA TP: 6h

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-4665:WEHI-231 NFATc1aA TP: 6h

text: ArrayExpress

text: WEHI-231 cell

text: B cell

text: house mouse

text: B cell lymphoma

text: NFATc1aA over expression

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: WEHI-231 NFATc1aA TP: 6h


E-MTAB-4665:WEHI-231 NFATc1aA TP: 96h

text: public

characteristic: SRA accession

text: E-MTAB-4665:WEHI-231 NFATc1aA TP: 96h

characteristic: Submitter Id

text: ArrayExpress

text: WEHI-231 cell

text: B cell

text: house mouse

text: B cell lymphoma

text: NFATc1aA over expression

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Mus musculus

text: WEHI-231 NFATc1aA TP: 96h

characteristic: title


E-MTAB-4665:WEHI-231 NFATc1bC TP: 0h

text: public

text: E-MTAB-4665:WEHI-231 NFATc1bC TP: 0h

text: ArrayExpress

characteristic: broker name

text: WEHI-231 cell

characteristic: cell line

text: B cell

text: house mouse

characteristic: common name

characteristic: description

text: B cell lymphoma

text: NFATc1bC over expression

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: WEHI-231 NFATc1bC TP: 0h


E-MTAB-4665:WEHI-231 NFATc1bC TP: 24h

text: public

text: E-MTAB-4665:WEHI-231 NFATc1bC TP: 24h

text: ArrayExpress

text: WEHI-231 cell

text: B cell

characteristic: cell type

text: house mouse

text: B cell lymphoma

characteristic: disease

text: NFATc1bC over expression

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: Mus musculus

characteristic: timepoint

text: WEHI-231 NFATc1bC TP: 24h


E-MTAB-4665:WEHI-231 NFATc1bC TP: 6h

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-4665:WEHI-231 NFATc1bC TP: 6h

text: ArrayExpress

text: WEHI-231 cell

text: B cell

text: house mouse

text: B cell lymphoma

text: NFATc1bC over expression

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: WEHI-231 NFATc1bC TP: 6h


E-MTAB-4665:WEHI-231 NFATc1bC TP: 96h

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-4665:WEHI-231 NFATc1bC TP: 96h

text: ArrayExpress

text: WEHI-231 cell

text: B cell

text: house mouse

text: B cell lymphoma

text: NFATc1bC over expression

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: WEHI-231 NFATc1bC TP: 96h


text: ROBERT KOCH INSTITUT

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Treponema pallidum enrichment using in-solution capture approach and post-capture pathogen enriched DNA was sequenced on an Illumina MiSeq.

text: Treponema pallidum

characteristic: organism

text: Treponema pallidum

text: Primate_bone_Treponema_pallidum_from_Procolobus_badius

characteristic: title


text: ROBERT KOCH INSTITUT

text: public

text: Treponema pallidum enrichment using DNA microarray-based approach and post-capture pathogen enriched DNA was sequenced on an Illumina HiSeq 2500

characteristic: description

text: Treponema pallidum

text: Treponema pallidum


text: ROBERT KOCH INSTITUT

text: public

text: Treponema pallidum

text: Treponema pallidum

text: Primate_bone_Treponema_pallidum_from_Pan_troglodytes_verus


text: ROBERT KOCH INSTITUT

text: public

text: Treponema pallidum

text: Treponema pallidum


text: UMCU

text: public

text: horse

characteristic: common name

text: Equus caballus

text: Equus caballus

text: Friesian dwarf


CASEB

text: UMCU

text: public

text: CASEB

text: horse

text: Equus caballus

text: Equus caballus

text: Friesian dwarf


CASEF

text: UMCU

text: public

text: CASEF

text: horse

text: Equus caballus

text: Equus caballus

text: Friesian dwarf


DCASE

text: UMCU

text: public

text: DCASE

text: horse

text: Equus caballus

text: Equus caballus

text: Friesian dwarf


NEWCASE

text: UMCU

text: public

text: NEWCASE

text: horse

text: Equus caballus

text: Equus caballus

text: Friesian dwarf


text: Shanghai Jiao Tong University

text: public

text: E-MTAB-4671:A549_RNA_Seq_ACAGTG_L001_R1_001.fastq

tag: Namespace:Shanghai Jiao Tong University

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: human

text: Protocols: Cells were cultured in RPMI 1640 Medium (Gibco, USA). Cultures were supplemented with 10% fetal bovine serum (FBS) (Gibco, USA) and 100 ug/ml penicillin/streptomycin (Life Technologies, Inc. USA). A549 cells were exposed to JFK (30 μg/ml) and DDP (6 μg/ml) for 48 h, alone or together. Total RNA of each sample was extracted by Trizol (Life Technologies, Inc. USA) according to manufacturer’s protocol. mRNA was isolated via Oligotex mRNA Mini Kit (Qiagen, Germany), and then treated with DNase for removing residual genomic DNA. 100 nanogram (ng) mRNA of each sample was fragmented, end-repaired, and ligated adapters using NEBNext Ultra Directional RNA Library Prep Kit (NEB, USA). Each sample was amplified 12 cycles in thermal cycler.

text: lung carcinoma

characteristic: disease

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens


characteristic: ENA-CHECKLIST

text: Shanghai Jiao Tong University

text: public

text: E-MTAB-4671:A549_RNA_Seq_ACAGTG_L002_R1_001.fastq

text: ArrayExpress

text: human

text: lung carcinoma

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens


characteristic: ENA-FIRST-PUBLIC

text: Shanghai Jiao Tong University

text: public

text: E-MTAB-4671:DDP_RNA_Seq_GATCAG_L001_R1_001.fastq

text: ArrayExpress

text: human

text: lung carcinoma

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens


characteristic: ENA-LAST-UPDATE

text: Shanghai Jiao Tong University

text: public

text: E-MTAB-4671:DDP_RNA_Seq_GATCAG_L002_R1_001.fastq

text: ArrayExpress

text: human

text: lung carcinoma

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens


characteristic: External Id

text: Shanghai Jiao Tong University

text: public

text: E-MTAB-4671:JKF+DDP_GCCAAT_L001_R1_001.fastq

text: ArrayExpress

text: human

text: lung carcinoma

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens


text: Shanghai Jiao Tong University

characteristic: INSDC center name

text: public

text: E-MTAB-4671:JKF+DDP_GCCAAT_L002_R1_001.fastq

text: ArrayExpress

text: human

text: lung carcinoma

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens


text: Shanghai Jiao Tong University

characteristic: INSDC first public

text: public

text: E-MTAB-4671:JKF_RNA_Seq_CAGATC_L001_R1_001.fastq

text: ArrayExpress

text: human

text: lung carcinoma

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens


text: Shanghai Jiao Tong University

characteristic: INSDC last update

text: public

text: E-MTAB-4671:JKF_RNA_Seq_CAGATC_L002_R1_001.fastq

text: ArrayExpress

text: human

text: lung carcinoma

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens


text: Pharyngula:Prim-5 - ZFS:0000029

characteristic: ArrayExpress-DevelopmentalStage

text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

characteristic: ArrayExpress-Species

text: Mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

characteristic: INSDC status

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (ATCACGTT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

characteristic: sample description

text: Danio rerio

text: Mixed

characteristic: strain


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

text: SC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: zebrafish

characteristic: common name

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single genotyped embryo homozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TGGTTGTT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed

characteristic: title


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TGCGATCT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TACTTCGG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

characteristic: ArrayExpress-DevelopmentalStage

text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: Mixed

text: SC

characteristic: INSDC last update

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TGTCTATC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

characteristic: ArrayExpress-Species

text: Mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

characteristic: INSDC status

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TGCTGATA) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

text: SC

text: public

characteristic: SRA accession

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GCAACATT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

characteristic: sample description

text: Danio rerio

text: Mixed

characteristic: strain


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

text: SC

text: public

characteristic: Submitter Id

text: zebrafish

characteristic: common name

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single genotyped embryo homozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GAGGATGG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (CGATGTTT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed

characteristic: title


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TCTCGGTT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

characteristic: ArrayExpress-DevelopmentalStage

text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: Mixed

text: SC

characteristic: INSDC first public

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and heterozygous for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TTCCTGCT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

characteristic: ArrayExpress-Species

text: Mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

characteristic: INSDC last update

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and heterozygous for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TCTCACGG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and heterozygous for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TATGTGGC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

characteristic: sample description

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

text: SC

text: public

characteristic: Submitter Id

text: zebrafish

characteristic: common name

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and heterozygous for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TAGACGGA) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed

characteristic: strain


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: zebrafish

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and heterozygous for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GGTCGTGT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and heterozygous for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GTTGTCGG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed

characteristic: title


text: Pharyngula:Prim-5 - ZFS:0000029

characteristic: ArrayExpress-DevelopmentalStage

text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: Mixed

text: SC

characteristic: INSDC center name

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and heterozygous for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TTAGGCAT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

characteristic: ArrayExpress-Species

text: Mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

characteristic: INSDC first public

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and heterozygous for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TAAGCGTT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and heterozygous for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TAGTGACT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

text: SC

text: public

characteristic: Submitter Id

text: zebrafish

characteristic: common name

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and heterozygous for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TCAGGAGG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

characteristic: sample description

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TTACTCGC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed

characteristic: strain


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: zebrafish

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TGTGAAGA) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

characteristic: ArrayExpress-DevelopmentalStage

text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: Mixed

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GAATCTGT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed

characteristic: title


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

characteristic: ArrayExpress-Species

text: Mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

characteristic: INSDC center name

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GGATTAGG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TGACCACT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

text: SC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: zebrafish

characteristic: common name

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TCCGTCTT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TACAGGAT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

characteristic: sample description

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TAAGTTCG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed

characteristic: strain


text: Pharyngula:Prim-5 - ZFS:0000029

characteristic: ArrayExpress-DevelopmentalStage

text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: Mixed

text: SC

text: public

text: zebrafish

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TCGTTAGC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

characteristic: ArrayExpress-Species

text: Mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TCTCTTCA) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed

characteristic: title


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and homozygous for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GTACATCT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and homozygous for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (ACAGTGGT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: zebrafish

characteristic: common name

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and homozygous for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TGTACCTT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and homozygous for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TCCTCAAT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

characteristic: sample description

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

characteristic: ArrayExpress-DevelopmentalStage

text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: Mixed

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and homozygous for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TCCAGTCG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed

characteristic: strain


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

characteristic: ArrayExpress-Species

text: Mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: zebrafish

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and homozygous for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TACCGAGC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and homozygous for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TTGTTCCA) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed

characteristic: title


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and homozygous for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GAGGTGCT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

characteristic: Submitter Id

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and homozygous for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GTGTGTCG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: zebrafish

characteristic: common name

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GCCAATGT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

characteristic: ArrayExpress-DevelopmentalStage

text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: Mixed

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TTCTGTGT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

characteristic: sample description

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

characteristic: ArrayExpress-Species

text: Mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TGTGGTTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed

characteristic: strain


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: zebrafish

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TGTATGCG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TGTTCTCC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed

characteristic: title


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

characteristic: SRA accession

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TGAAGCCA) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

characteristic: Submitter Id

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GCATGGCT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

characteristic: ArrayExpress-DevelopmentalStage

text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: Mixed

text: SC

text: public

text: zebrafish

characteristic: common name

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GCAATCCG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

characteristic: ArrayExpress-Species

text: Mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (CAGATCTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

characteristic: sample description

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TCTGCTGT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed

characteristic: strain


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: zebrafish

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TAGTCTTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TCATTGAG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed

characteristic: title


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

characteristic: SRA accession

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TTCGCACC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

characteristic: ArrayExpress-DevelopmentalStage

text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: Mixed

text: SC

text: public

characteristic: Submitter Id

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TACCACCA) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

characteristic: ArrayExpress-Species

text: Mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: zebrafish

characteristic: common name

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GTTAGCCT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GACCTTAG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

characteristic: sample description

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (ACTTGATG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed

characteristic: strain


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: zebrafish

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TTGGAGGT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TTCCATTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed

characteristic: title


text: Pharyngula:Prim-5 - ZFS:0000029

characteristic: ArrayExpress-DevelopmentalStage

text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: Mixed

text: SC

text: public

characteristic: SRA accession

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TGGCTCAG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

characteristic: ArrayExpress-Species

text: Mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

characteristic: Submitter Id

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo wild type for tfap2a, allele sa24445 and homozygous for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TTGCGTAC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: zebrafish

characteristic: common name

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo wild type for tfap2a, allele sa24445 and homozygous for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TGCGTGAA) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo wild type for tfap2a, allele sa24445 and homozygous for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GTCGCTAT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

characteristic: sample description

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo wild type for tfap2a, allele sa24445 and homozygous for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GCCTGTTC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed

characteristic: strain


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: zebrafish

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single genotyped embryo wild type for tfap2a, allele sa24445 and homozygous for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GATCAGCG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

characteristic: ArrayExpress-DevelopmentalStage

text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: Mixed

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo wild type for tfap2a, allele sa24445 and homozygous for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TCGAGCGT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed

characteristic: title


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

characteristic: ArrayExpress-Species

text: Mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

characteristic: SRA accession

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo wild type for tfap2a, allele sa24445 and homozygous for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TCGAAGTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: Mixed

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo wild type for tfap2a, allele sa24445 and homozygous for tfap2c, allele sa18857 ZMP phenotype 250 clutch 1 plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (TATGCCAG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph250.

text: Danio rerio

text: Mixed