characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Antwerp

text: public

text: Urban plant 5c

text: City

characteristic: environment (biome)

text: Plant

characteristic: environment (feature)

text: Leaves

text: Belgium

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: urban metagenome

characteristic: organism

text: plant-associated

text: Ivy phyllosphere

text: urban metagenome

text: Illumina

characteristic: title


status: PUBLIC

tag: attribute

characteristic: External Id

text: University of Antwerp

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:University of Antwerp

characteristic: Submitter Id

characteristic: collection date

text: Urban plant 4a

characteristic: description

text: City

text: Plant

text: Leaves

characteristic: environment (material)

text: Belgium

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: urban metagenome

text: plant-associated

characteristic: plant-associated environmental package

text: Ivy phyllosphere

characteristic: project name

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text: Illumina

characteristic: sequencing method

type: has member


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Antwerp

text: public

text: Urban plant 4b

text: City

characteristic: environment (biome)

text: Plant

characteristic: environment (feature)

text: Leaves

text: Belgium

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: urban metagenome

characteristic: organism

text: plant-associated

text: Ivy phyllosphere

text: urban metagenome

text: Illumina

characteristic: title


characteristic: External Id

text: University of Antwerp

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Urban plant 4c

text: City

text: Plant

text: Leaves

text: Belgium

text: mimarks-survey

text: urban metagenome

text: plant-associated

text: Ivy phyllosphere

text: urban metagenome

text: Illumina


text: University of Antwerp

text: public

text: Urban plant 6a

characteristic: description

text: City

text: Plant

text: Leaves

characteristic: environment (material)

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: urban metagenome

text: plant-associated

characteristic: plant-associated environmental package

text: Ivy phyllosphere

characteristic: project name

text: urban metagenome

text: Illumina

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Antwerp

text: public

text: Urban plant 6b

text: City

characteristic: environment (biome)

text: Plant

characteristic: environment (feature)

text: Leaves

text: Belgium

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: urban metagenome

characteristic: organism

text: plant-associated

text: Ivy phyllosphere

text: urban metagenome

text: Illumina

characteristic: title


characteristic: External Id

text: University of Antwerp

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Urban plant 6c

text: City

text: Plant

text: Leaves

text: Belgium

text: mimarks-survey

text: urban metagenome

text: plant-associated

text: Ivy phyllosphere

text: urban metagenome

text: Illumina


text: University of Antwerp

text: public

text: Non-urban plant 3a

characteristic: description

text: Wood

text: Plant

text: Leaves

characteristic: environment (material)

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: urban metagenome

text: plant-associated

characteristic: plant-associated environmental package

text: Ivy phyllosphere

characteristic: project name

text: urban metagenome

text: Illumina

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Antwerp

text: public

text: Non-urban plant 3b

text: Wood

characteristic: environment (biome)

text: Plant

characteristic: environment (feature)

text: Leaves

text: Belgium

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: urban metagenome

characteristic: organism

text: plant-associated

text: Ivy phyllosphere

text: urban metagenome

text: Illumina

characteristic: title


characteristic: External Id

text: University of Antwerp

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Non-urban plant 3c

text: Wood

text: Plant

text: Leaves

text: Belgium

text: mimarks-survey

text: urban metagenome

text: plant-associated

text: Ivy phyllosphere

text: urban metagenome

text: Illumina


text: University of Antwerp

text: public

text: Non-urban plant 1a

characteristic: description

text: Moor

text: Plant

text: Leaves

characteristic: environment (material)

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: urban metagenome

text: plant-associated

characteristic: plant-associated environmental package

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characteristic: project name

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characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Antwerp

text: public

text: Non-urban plant 1b

text: Moor

characteristic: environment (biome)

text: Plant

characteristic: environment (feature)

text: Leaves

text: Belgium

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: urban metagenome

characteristic: organism

text: plant-associated

text: Ivy phyllosphere

text: urban metagenome

text: Illumina

characteristic: title


characteristic: External Id

text: University of Antwerp

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Non-urban plant 1c

text: Moor

text: Plant

text: Leaves

text: Belgium

text: mimarks-survey

text: urban metagenome

text: plant-associated

text: Ivy phyllosphere

text: urban metagenome

text: Illumina


text: University of Antwerp

text: public

text: Non-urban plant 2a

characteristic: description

text: Moor

text: Plant

text: Leaves

characteristic: environment (material)

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: urban metagenome

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characteristic: plant-associated environmental package

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characteristic: project name

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text: Illumina

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Antwerp

text: public

text: Non-urban plant 2b

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characteristic: environment (biome)

text: Plant

characteristic: environment (feature)

text: Leaves

text: Belgium

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: urban metagenome

characteristic: organism

text: plant-associated

text: Ivy phyllosphere

text: urban metagenome

text: Illumina

characteristic: title


characteristic: External Id

text: University of Antwerp

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Non-urban plant 2c

text: Moor

text: Plant

text: Leaves

text: Belgium

text: mimarks-survey

text: urban metagenome

text: plant-associated

text: Ivy phyllosphere

text: urban metagenome

text: Illumina


E-MTAB-4719:BMP4 replica 1

text: University of Cologne, Germany

text: public

text: E-MTAB-4719:BMP4 replica 1

tag: Namespace:University of Cologne, Germany

text: ArrayExpress

characteristic: broker name

text: HUVEC

characteristic: cell line

text: human

characteristic: common name

text: Protocols: Cells were treated with 10 ng/ml TNFalpha for 60 min where indicated Libraries were generated by inverse PCR using primers already carrying Illumina adapter sequences and targeting the TSSs of the genes indicated

characteristic: description

text: NlaIII

characteristic: endonuclease for library preparation

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: BMP4 replica 1


E-MTAB-4719:BMP4 replica 2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Cologne, Germany

text: public

text: E-MTAB-4719:BMP4 replica 2

text: ArrayExpress

text: HUVEC

text: human

text: NlaIII

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: tumor necrosis factor alpha

characteristic: stimulus

text: BMP4 replica 2


E-MTAB-4719:CDKN3 replica 1

characteristic: External Id

text: University of Cologne, Germany

text: public

text: E-MTAB-4719:CDKN3 replica 1

text: ArrayExpress

text: HUVEC

text: human

text: ApoI

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Homo sapiens

text: CDKN3 replica 1

characteristic: title


E-MTAB-4719:CDKN3 replica 2

text: University of Cologne, Germany

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-4719:CDKN3 replica 2

text: ArrayExpress

text: HUVEC

text: human

text: ApoI

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: CDKN3 replica 2


E-MTAB-4719:CDKN3 replica 3

text: University of Cologne, Germany

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-4719:CDKN3 replica 3

characteristic: Submitter Id

text: ArrayExpress

text: HUVEC

text: human

text: ApoI

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: CDKN3 replica 3


E-MTAB-4719:CDKN3 replica 4

text: University of Cologne, Germany

text: public

text: E-MTAB-4719:CDKN3 replica 4

text: ArrayExpress

characteristic: broker name

text: HUVEC

characteristic: cell line

text: human

text: NlaIII

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: CDKN3 replica 4


E-MTAB-4719:CDKN3 replica 5

text: University of Cologne, Germany

text: public

text: E-MTAB-4719:CDKN3 replica 5

text: ArrayExpress

text: HUVEC

text: human

characteristic: common name

characteristic: description

text: NlaIII

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: tumor necrosis factor alpha

text: CDKN3 replica 5


E-MTAB-4719:CNIH replica 1

characteristic: ENA-CHECKLIST

text: University of Cologne, Germany

text: public

text: E-MTAB-4719:CNIH replica 1

text: ArrayExpress

text: HUVEC

text: human

text: NlaIII

characteristic: endonuclease for library preparation

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: CNIH replica 1


E-MTAB-4719:CNIH replica 2

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Cologne, Germany

text: public

text: E-MTAB-4719:CNIH replica 2

text: ArrayExpress

text: HUVEC

text: human

text: NlaIII

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: tumor necrosis factor alpha

text: CNIH replica 2


E-MTAB-4719:EDN1 (merged)

characteristic: External Id

text: University of Cologne, Germany

text: public

text: E-MTAB-4719:EDN1 (merged)

text: ArrayExpress

text: HUVEC

text: human

text: ApoI

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: EDN1 (merged)


E-MTAB-4719:SAMD4A +RNase A

text: University of Cologne, Germany

text: public

text: E-MTAB-4719:SAMD4A +RNase A

text: ArrayExpress

text: HUVEC

text: human

text: ApoI

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Homo sapiens

text: SAMD4A +RNase A


E-MTAB-4719:SAMD4A -RNase A

text: University of Cologne, Germany

text: public

text: E-MTAB-4719:SAMD4A -RNase A

text: ArrayExpress

text: HUVEC

text: human

text: ApoI

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: SAMD4A -RNase A

characteristic: title


E-MTAB-4719:SAMD4A 0.5 million cells

text: University of Cologne, Germany

characteristic: INSDC center name

text: public

text: E-MTAB-4719:SAMD4A 0.5 million cells

text: ArrayExpress

text: HUVEC

text: human

text: ApoI

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: SAMD4A 0.5 million cells


E-MTAB-4719:SAMD4A 1 million cells

text: University of Cologne, Germany

characteristic: INSDC first public

text: public

text: E-MTAB-4719:SAMD4A 1 million cells

text: ArrayExpress

text: HUVEC

text: human

text: ApoI

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: SAMD4A 1 million cells


E-MTAB-4719:SAMD4A 2 million cells

text: University of Cologne, Germany

characteristic: INSDC last update

text: public

text: E-MTAB-4719:SAMD4A 2 million cells

text: ArrayExpress

text: HUVEC

text: human

text: ApoI

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: SAMD4A 2 million cells


E-MTAB-4719:SAMD4A replica 1

text: University of Cologne, Germany

text: public

characteristic: INSDC status

text: E-MTAB-4719:SAMD4A replica 1

text: ArrayExpress

text: HUVEC

text: human

text: ApoI

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: SAMD4A replica 1


E-MTAB-4719:SAMD4A replica 1-TNF

text: University of Cologne, Germany

text: public

characteristic: SRA accession

text: E-MTAB-4719:SAMD4A replica 1-TNF

text: ArrayExpress

text: HUVEC

text: human

text: ApoI

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: tumor necrosis factor alpha

characteristic: stimulus

text: SAMD4A replica 1-TNF


E-MTAB-4719:SAMD4A replica 2

text: University of Cologne, Germany

text: public

text: E-MTAB-4719:SAMD4A replica 2

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: HUVEC

text: human

text: ApoI

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: SAMD4A replica 2


E-MTAB-4719:SAMD4A replica 2-TNF

text: University of Cologne, Germany

text: public

text: E-MTAB-4719:SAMD4A replica 2-TNF

text: ArrayExpress

text: HUVEC

characteristic: cell line

text: human

characteristic: common name

text: ApoI

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: tumor necrosis factor alpha

text: SAMD4A replica 2-TNF


E-MTAB-4719:SAMD4A replica 3

characteristic: ENA-CHECKLIST

text: University of Cologne, Germany

text: public

text: E-MTAB-4719:SAMD4A replica 3

text: ArrayExpress

text: HUVEC

text: human

characteristic: description

text: ApoI

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: SAMD4A replica 3


E-MTAB-4719:SAMD4A replica 5

characteristic: ENA-FIRST-PUBLIC

text: University of Cologne, Germany

text: public

text: E-MTAB-4719:SAMD4A replica 5

text: ArrayExpress

text: HUVEC

text: human

text: NlaIII

characteristic: endonuclease for library preparation

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: SAMD4A replica 5


E-MTAB-4719:SAMD4A replica 6-TNF

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Cologne, Germany

text: public

text: E-MTAB-4719:SAMD4A replica 6-TNF

text: ArrayExpress

text: HUVEC

text: human

text: NlaIII

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: tumor necrosis factor alpha

text: SAMD4A replica 6-TNF


E-MTAB-4719:SAMD4A replica 7

text: University of Cologne, Germany

text: public

text: E-MTAB-4719:SAMD4A replica 7

text: ArrayExpress

text: human

text: ApoI

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Homo sapiens

text: SAMD4A replica 7

characteristic: title


E-MTAB-4719:SAMD4A replica 8-TNF

text: University of Cologne, Germany

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-4719:SAMD4A replica 8-TNF

text: ArrayExpress

text: human

text: ApoI

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: tumor necrosis factor alpha

text: SAMD4A replica 8-TNF


E-MTAB-4719:TBX5 replica 1

text: University of Cologne, Germany

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-4719:TBX5 replica 1

text: ArrayExpress

text: HUVEC

text: human

text: NlaIII

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: TBX5 replica 1


E-MTAB-4719:TBX5 replica 2

text: University of Cologne, Germany

text: public

characteristic: SRA accession

text: E-MTAB-4719:TBX5 replica 2

text: ArrayExpress

text: HUVEC

text: human

text: NlaIII

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: tumor necrosis factor alpha

characteristic: stimulus

text: TBX5 replica 2


unit: mg Chl/m3

characteristic: Chlorophyll Sensor

text: J CRAIG VENTER INSTITUTE

text: public

unit: practical salinity unit

characteristic: Salinity Sensor

tag: Namespace:J CRAIG VENTER INSTITUTE

characteristic: Submitter Id

characteristic: ammonia

text: marine metagenome

unit: m

characteristic: depth

text: Helcom site 4 Deepest Section of the Baltic Sea

text: coastal water

characteristic: environment (biome)

text: coastal water

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: water

characteristic: environmental package

characteristic: event date/time start

characteristic: latitude start

characteristic: longitude start

text: Landsort Deep

characteristic: marine region

characteristic: nitrate

characteristic: nitrite

text: marine metagenome

unit: µmol/kg

characteristic: oxygen sensor

characteristic: phosphate

text: Global Ocean Sampling

characteristic: project name

characteristic: protocol label

text: diaphram pump

characteristic: sample collection device

text: Beyster Expedition

characteristic: sampling campaign

text: Sorcerer II

characteristic: sampling platform

text: Helcom Site 4

characteristic: sampling station

text: marine metagenome

characteristic: size fraction lower threshold

characteristic: size fraction upper threshold

unit: ºC

characteristic: temperature

characteristic: urea


BG1 (4m)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF WESTERN ONTARIO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: BG1 (4m)

tag: Namespace:UNIVERSITY OF WESTERN ONTARIO

characteristic: Submitter Id

characteristic: collection date

characteristic: depth

text: Peatland forest

characteristic: environment (biome)

text: Boreal

characteristic: environment (feature)

text: Soil

characteristic: environment (material)

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: fungus metagenome

characteristic: organism

text: Climate Change

text: fungus metagenome

text: Illumina

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: Litter bag samples

characteristic: title


BG2 (4m)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF WESTERN ONTARIO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: BG2 (4m)

text: Peatland forest

text: Boreal

text: Soil

text: Canada

text: metagenome

text: fungus metagenome

text: Climate Change

characteristic: project name

text: fungus metagenome

text: Illumina

text: soil

text: Litter bag samples


Asco (4m)

text: UNIVERSITY OF WESTERN ONTARIO

text: public

characteristic: SRA accession

text: Asco (4m)

characteristic: Submitter Id

characteristic: collection date

characteristic: depth

text: Peatland forest

characteristic: environment (biome)

text: Boreal

characteristic: environment (feature)

text: Soil

characteristic: environment (material)

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

text: metagenome

text: fungus metagenome

text: Climate Change

text: fungus metagenome

text: Illumina

text: soil

text: Litter bag samples


Asco-BG (8,12 m)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF WESTERN ONTARIO

text: public

text: Asco-BG (8,12 m)

text: Peatland forest

text: Boreal

text: Soil

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: fungus metagenome

characteristic: organism

text: Climate Change

text: fungus metagenome

text: Illumina

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: Litter bag samples

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF WESTERN ONTARIO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Boreal forest

text: Boreal

text: Soil

text: Canada

text: metagenome

text: fungus metagenome

text: Climate Chnage

characteristic: project name

text: fungus metagenome

text: Illumina

text: soil

text: T18-T0 data


text: CD4 T cell

characteristic: ArrayExpress-CellType

text: Wildtype

characteristic: ArrayExpress-Phenotype

text: male

characteristic: ArrayExpress-Sex

text: Mus musculus

characteristic: ArrayExpress-Species

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: house mouse

characteristic: common name

text: Mus musculus

characteristic: sample description

text: Mus musculus


text: CD4 T cell

characteristic: ArrayExpress-Immunoprecipitate

text: Wildtype

text: male

text: Mus musculus

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: house mouse

text: Mus musculus

characteristic: organism

text: Mus musculus

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:CUBE - Division of Computational Systems Biology, Dept. of Microbiology and Ecosystem Science, University of Vienna, Austria

text: ArrayExpress

characteristic: broker name

text: Protocols: Bacteria grown in Ham F-12 medium (PAA Laboratories) supplemented with 10% fetal calf serum (FCS; PAA Laboratories), 20 mM HEPES (PAA Laboratories) at 37°C in a humidified incubator under 5% CO2to the mid-logarithmic phase were harvested by centrifugation Three replicates each

characteristic: description

text: Ham F-12 medium

characteristic: growth condition

text: Neisseria meningitidis

text: Neisseria meningitidis

characteristic: replicate

text: Neisseria meningitidis

characteristic: strain


characteristic: ENA-CHECKLIST

text: CUBE - Division of Computational Systems Biology, Dept. of Microbiology and Ecosystem Science, University of Vienna, Austria

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: Ham F-12 medium

text: Neisseria meningitidis

text: Neisseria meningitidis

text: Neisseria meningitidis


text: Burkholderia ubonensis

characteristic: ArrayExpress-Species

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: Burkholderia ubonensis

characteristic: common name

text: Burkholderia ubonensis

text: Burkholderia ubonensis


E-MTAB-4655:Sample 1

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-4655:Sample 1

tag: Namespace:ARC CoE Plant Energy Biology The University of Western Australia

unit: day

characteristic: age

text: ArrayExpress

text: thale cress

text: Protocols: One petri-dish with approximately 20 seedlings were collected and snap frozen in liquid nitrogen MS media with 2% sucrose and stratified for 2-3 days at 4°C, then grown under long-day conditions (16 h light/8 h dark) at 22 °C and 100 μmol m-2 s-1 Sigma Spectrum Plant RNA kit, sigma on-column DNAse treatment, Turbo DNA-free kit treatment Illumina RiboZero Plant RNA library kit

text: early rosette growth stage

characteristic: developmental stage

characteristic: ecotype

text: wild type genotype

characteristic: genotype

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Sample 1

characteristic: title


E-MTAB-4655:Sample 10

characteristic: External Id

text: ARC CoE Plant Energy Biology The University of Western Australia

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-4655:Sample 10

text: ArrayExpress

characteristic: broker name

text: thale cress

characteristic: description

text: early rosette growth stage

text: atphb3 ANAC017

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Sample 10


E-MTAB-4655:Sample 11

characteristic: ENA-CHECKLIST

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-4655:Sample 11

characteristic: Submitter Id

text: ArrayExpress

text: thale cress

text: early rosette growth stage

text: atphb3 ANAC017

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Sample 11


E-MTAB-4655:Sample 12

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-4655:Sample 12

text: ArrayExpress

text: thale cress

characteristic: common name

text: early rosette growth stage

text: atphb3 ANAC017

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Sample 12


E-MTAB-4655:Sample 13

text: public

text: E-MTAB-4655:Sample 13

characteristic: age

text: ArrayExpress

text: thale cress

text: early rosette growth stage

characteristic: developmental stage

characteristic: ecotype

text: atphb3 anac017

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Sample 13


E-MTAB-4655:Sample 14

text: public

text: E-MTAB-4655:Sample 14

text: ArrayExpress

text: thale cress

text: early rosette growth stage

text: atphb3 anac017

characteristic: genotype

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Sample 14

characteristic: title


E-MTAB-4655:Sample 15

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-4655:Sample 15

text: ArrayExpress

text: thale cress

text: early rosette growth stage

text: atphb3 anac017

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Sample 15


E-MTAB-4655:Sample 2

characteristic: INSDC last update

text: public

text: E-MTAB-4655:Sample 2

text: ArrayExpress

characteristic: broker name

text: thale cress

characteristic: description

text: early rosette growth stage

text: wild type genotype

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Sample 2


E-MTAB-4655:Sample 3

characteristic: ENA-CHECKLIST

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-4655:Sample 3

text: ArrayExpress

text: thale cress

text: early rosette growth stage

text: wild type genotype

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Sample 3


E-MTAB-4655:Sample 4

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-4655:Sample 4

characteristic: Submitter Id

text: ArrayExpress

text: thale cress

text: early rosette growth stage

text: rpotmp ANAC017

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Sample 4


E-MTAB-4655:Sample 5

text: public

text: E-MTAB-4655:Sample 5

characteristic: age

text: ArrayExpress

text: thale cress

characteristic: common name

text: early rosette growth stage

characteristic: developmental stage

text: rpotmp ANAC017

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Sample 5


E-MTAB-4655:Sample 6

text: public

text: E-MTAB-4655:Sample 6

text: ArrayExpress

text: thale cress

text: early rosette growth stage

characteristic: ecotype

text: rpotmp ANAC017

characteristic: genotype

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Sample 6


E-MTAB-4655:Sample 7

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-4655:Sample 7

text: ArrayExpress

text: thale cress

text: early rosette growth stage

text: rpotmp anac017

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Sample 7

characteristic: title


E-MTAB-4655:Sample 8

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-4655:Sample 8

text: ArrayExpress

characteristic: broker name

text: thale cress

text: early rosette growth stage

text: rpotmp anac017

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Sample 8


E-MTAB-4655:Sample 9

characteristic: ENA-CHECKLIST

text: public

characteristic: INSDC status

text: E-MTAB-4655:Sample 9

text: ArrayExpress

text: thale cress

characteristic: description

text: early rosette growth stage

text: rpotmp anac017

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Sample 9


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UZH

text: public

characteristic: SRA accession

text: Aurelien Carlier

characteristic: collected by

text: Genomic DNA of strain LMG 29303 for Miseq 2x250bp sequencing

text: Switzerland

characteristic: geographic location (country and/or sea)

text: Zurich

characteristic: geographic location (region and locality)

text: Dioscorea sansibarensis

characteristic: host

text: Aurelien Carlier

characteristic: identified by

text: Alcaligenaceae bacterium LMG 29303

text: Alcaligenaceae bacterium LMG 29303

text: gDNA of strain LMG 29303 for Miseq


text: female

characteristic: ArrayExpress-Sex

text: Mus musculus

characteristic: ArrayExpress-Species

characteristic: External Id

text: SC

text: public

characteristic: Submitter Id

text: house mouse

characteristic: common name

text: Mus musculus

characteristic: organism

text: Mus musculus


text: male

text: Mus musculus

characteristic: ENA-CHECKLIST

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CEBITEC

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

text: Draft genome of Streptococcus pneumoniae isolate 20605

characteristic: description

text: human

characteristic: environment (biome)

text: Blood

characteristic: environment (feature)

text: Blood

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-associated

characteristic: human associated environmental package

text: mimarks-survey

characteristic: investigation type

characteristic: isolate

text: Streptococcus pneumoniae

characteristic: project name

text: Streptococcus pneumoniae

text: Illumina MiSeq

characteristic: sequencing method


text: Streptococcus agalactiae

characteristic: ArrayExpress-Species

characteristic: ENA-CHECKLIST

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Streptococcus agalactiae

characteristic: common name

text: Streptococcus agalactiae

characteristic: organism

text: Streptococcus agalactiae

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CEBITEC

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

text: Draft genome of Streptococcus pneumoniae isolate 27700

characteristic: description

text: human

characteristic: environment (biome)

text: Blood

characteristic: environment (feature)

text: Blood

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: human-associated

text: mimarks-survey

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Illumina MiSeq


characteristic: ENA-CHECKLIST

characteristic: External Id

text: CEBITEC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Draft genome of Streptococcus pneumoniae isolate 27401

text: Human

text: CSF

text: CSF

text: Germany

characteristic: geographic location (longitude)

text: human-associated

characteristic: human associated environmental package

text: mimarks-survey

characteristic: investigation type

characteristic: isolate

text: Streptococcus pneumoniae

characteristic: project name

text: Streptococcus pneumoniae

text: Illumina MiSeq

characteristic: sequencing method


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: PUBLIC HEALTH ENGLAND

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:PUBLIC HEALTH ENGLAND

characteristic: Submitter Id

characteristic: broker name

text: Neisseria meningitidis

characteristic: organism

text: Neisseria meningitidis

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: PUBLIC HEALTH ENGLAND

characteristic: INSDC center name

text: public

characteristic: description

text: Neisseria lactamica

text: Neisseria lactamica


text: PUBLIC HEALTH ENGLAND

characteristic: INSDC first public

text: public

text: Neisseria cinerea

text: Neisseria cinerea


text: PUBLIC HEALTH ENGLAND

text: public

text: unidentified

text: unidentified


E-MTAB-4777:Pseudomonas aeruginosa PAO1

text: public

text: E-MTAB-4777:Pseudomonas aeruginosa PAO1

tag: Namespace:Center for Biotechnology (CeBiTec), Universitat Bielefeld, Universitatsstr. 25, 33615 Bielefeld, Germany

text: ArrayExpress

text: Protocols: Preculture cells of Pseudomonas aeruginosa PAO1 and Pseudomonas aeruginosa PAO1∆gbuA were washed and used to inoculate main cultures in 4 ml medium B (50 mM Hepes (pH 7), 0.5 mM MgSO4, 14 mM KCl, 7.2 mM NaCl, 5 mM NH4Cl. After autoclaving, the medium was complemented with 0.01 mM CaCl2, 0.15 mM Na-K-phosphate buffer (pH 7; 0.105 mM K2HPO4, 0.045 mM NaH2PO4) and the trace element solution SL10 (Widdel et al., 1983)) containing 20 mM succinate and 100 μM 4-GB in 15 ml test tubes in triplicates with an OD600 of 0.001. After incubation for 11 h at 37°C in at 200 r.p.m. in a rotary shaker, the respective triplicates were combined, harvested by centrifugation and resuspended in medium B without complementing solutions. RNA was extracted with the innuPREP RNA Minikit from Analytik Jena (Jena, Germany) according to the manufacturer’s instructions. Residual DNA was removed by digestion with 10 U RNase-free DNase I (Thermo scientific) for 1 h in the presence of RiboLock RNase inhibitor (Thermo scientific). After DNA digestion, the RNA was again purified with the same kit. RNA quality was checked by Trinean Xpose (Gentbrugge, Belgium) and the Agilent RNA Nano 6000 Kit on an Agilent 2100 Bioanalyzer (Agilent Technologies, Boblingen, Germany). Ribosomal RNA molecules were removed from total RNA with the Ribo-Zero rRNA Removal Kit (Illumina, San Diega, USA) and removal of rRNA was checked with the Agilent RNA Pico 6000 Kit on an Agilent 2100 Bioanalyzer.

text: wild type genotype

characteristic: genotype

text: Pseudomonas aeruginosa PAO1

text: Pseudomonas aeruginosa PAO1

text: Pseudomonas aeruginosa PAO1

text: Pseudomonas aeruginosa PAO1


text: Center for Biotechnology (CeBiTec), Universitat Bielefeld, Universitatsstr. 25, 33615 Bielefeld, Germany

text: public

text: E-MTAB-4777:Pseudomonas aeruginosa PAO1gbuA

text: ArrayExpress

text: gbuA

text: Pseudomonas aeruginosa PAO1

text: Pseudomonas aeruginosa PAO1

text: Pseudomonas aeruginosa PAO1

text: Pseudomonas aeruginosa PAO1gbuA


text: Lab of microbiology

text: public

tag: Namespace:Lab of microbiology

characteristic: collection date

characteristic: depth

text: Riverbed sediment

characteristic: environment (biome)

text: Riverbed sediment

characteristic: environment (feature)

text: Riverbed sediment

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: uncultured bacterium

text: AQUAREHAB

characteristic: project name

text: uncultured bacterium

text: sediment

characteristic: sediment environmental package

text: MiSeq


P26-oxic static-I

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Lab of microbiology

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: P26-oxic static-I

characteristic: Submitter Id

text: Riverbed sediment

text: Riverbed sediment

text: Riverbed sediment

text: Belgium

text: mimarks-survey

text: uncultured bacterium

characteristic: organism

text: AQUAREHAB

text: uncultured bacterium

text: sediment

text: MiSeq

characteristic: sequencing method

text: P26-oxic static-I

characteristic: title


P26-oxic static-II

text: Lab of microbiology

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: P26-oxic static-II

characteristic: collection date

characteristic: depth

text: Riverbed sediment

characteristic: environment (biome)

text: Riverbed sediment

characteristic: environment (feature)

text: Riverbed sediment

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

text: mimarks-survey

text: uncultured bacterium

text: AQUAREHAB

text: uncultured bacterium

text: sediment

text: MiSeq

text: P26-oxic static-II


P26-anoxic static2-I

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Lab of microbiology

text: public

text: P26-anoxic static2-I

text: Riverbed sediment

text: Riverbed sediment

text: Riverbed sediment

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: uncultured bacterium

text: AQUAREHAB

characteristic: project name

text: uncultured bacterium

text: sediment

characteristic: sediment environmental package

text: MiSeq

text: P26-anoxic static2-I


P26-anoxic static2-II

text: Lab of microbiology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: P26-anoxic static2-II

characteristic: Submitter Id

text: Riverbed sediment

text: Riverbed sediment

text: Riverbed sediment

text: Belgium

text: mimarks-survey

text: uncultured bacterium

characteristic: organism

text: AQUAREHAB

text: uncultured bacterium

text: sediment

text: MiSeq

characteristic: sequencing method

text: P26-anoxic static2-II

characteristic: title


P26-anoxic shaking-I

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Lab of microbiology

text: public

text: P26-anoxic shaking-I

characteristic: collection date

characteristic: depth

text: Riverbed sediment

characteristic: environment (biome)

text: Riverbed sediment

characteristic: environment (feature)

text: Riverbed sediment

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

text: mimarks-survey

text: uncultured bacterium

text: AQUAREHAB

text: uncultured bacterium

text: sediment

text: MiSeq

text: P26-anoxic shaking-I


P26-anoxic shaking-II

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Lab of microbiology

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: P26-anoxic shaking-II

text: Riverbed sediment

text: Riverbed sediment

text: Riverbed sediment

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: uncultured bacterium

text: AQUAREHAB

characteristic: project name

text: uncultured bacterium

text: sediment

characteristic: sediment environmental package

text: MiSeq

text: P26-anoxic shaking-II


P26-oxic shaking-I

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Lab of microbiology

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: P26-oxic shaking-I

characteristic: Submitter Id

text: Riverbed sediment

text: Riverbed sediment

text: Riverbed sediment

text: Belgium

text: mimarks-survey

text: uncultured bacterium

characteristic: organism

text: AQUAREHAB

text: uncultured bacterium

text: sediment

text: MiSeq

characteristic: sequencing method

text: P26-oxic shaking-I

characteristic: title


P26-oxic shaking-II

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Lab of microbiology

text: public

text: P26-oxic shaking-II

characteristic: collection date

characteristic: depth

text: Riverbed sediment

characteristic: environment (biome)

text: Riverbed sediment

characteristic: environment (feature)

text: Riverbed sediment

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

text: mimarks-survey

text: uncultured bacterium

text: AQUAREHAB

text: uncultured bacterium

text: sediment

text: MiSeq

text: P26-oxic shaking-II


P25-oxic static-I

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Lab of microbiology

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: P25-oxic static-I

text: Riverbed sediment

text: Riverbed sediment

text: Riverbed sediment

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: uncultured bacterium

text: AQUAREHAB

characteristic: project name

text: uncultured bacterium

text: sediment

characteristic: sediment environmental package

text: MiSeq

text: P25-oxic static-I


P25-oxic static-II

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Lab of microbiology

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: P25-oxic static-II

characteristic: Submitter Id

text: Riverbed sediment

text: Riverbed sediment

text: Riverbed sediment

text: Belgium

text: mimarks-survey

text: uncultured bacterium

characteristic: organism

text: AQUAREHAB

text: uncultured bacterium

text: sediment

text: MiSeq

characteristic: sequencing method

text: P25-oxic static-II

characteristic: title


P25-anoxic static2-I

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Lab of microbiology

text: public

text: P25-anoxic static2-I

characteristic: collection date

characteristic: depth

text: Riverbed sediment

characteristic: environment (biome)

text: Riverbed sediment

characteristic: environment (feature)

text: Riverbed sediment

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

text: mimarks-survey

text: uncultured bacterium

text: AQUAREHAB

text: uncultured bacterium

text: sediment

text: MiSeq

text: P25-anoxic static2-I


P25-anoxic static2-II

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Lab of microbiology

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: P25-anoxic static2-II

text: Riverbed sediment

text: Riverbed sediment

text: Riverbed sediment

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: uncultured bacterium

text: AQUAREHAB

characteristic: project name

text: uncultured bacterium

text: sediment

characteristic: sediment environmental package

text: MiSeq

text: P25-anoxic static2-II


P25-anoxic shaking-I

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Lab of microbiology

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: P25-anoxic shaking-I

characteristic: Submitter Id

text: Riverbed sediment

text: Riverbed sediment

text: Riverbed sediment

text: Belgium

text: mimarks-survey

text: uncultured bacterium

characteristic: organism

text: AQUAREHAB

text: uncultured bacterium

text: sediment

text: MiSeq

characteristic: sequencing method

text: P25-anoxic shaking-I

characteristic: title


P25-anoxic shaking-II

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Lab of microbiology

text: public

text: P25-anoxic shaking-II

characteristic: collection date

characteristic: depth

text: Riverbed sediment

characteristic: environment (biome)

text: Riverbed sediment

characteristic: environment (feature)

text: Riverbed sediment

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

text: mimarks-survey

text: uncultured bacterium

text: AQUAREHAB

text: uncultured bacterium

text: sediment

text: MiSeq

text: P25-anoxic shaking-II


P25-oxic shaking-I

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Lab of microbiology

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: P25-oxic shaking-I

text: Riverbed sediment

text: Riverbed sediment

text: Riverbed sediment

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: uncultured bacterium

text: AQUAREHAB

characteristic: project name

text: uncultured bacterium

text: sediment

characteristic: sediment environmental package

text: MiSeq

text: P25-oxic shaking-I


P25-oxic shaking-II

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Lab of microbiology

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: P25-oxic shaking-II

characteristic: Submitter Id

text: Riverbed sediment

text: Riverbed sediment

text: Riverbed sediment

text: Belgium

text: mimarks-survey

text: uncultured bacterium

characteristic: organism

text: AQUAREHAB

text: uncultured bacterium

text: sediment

text: MiSeq

characteristic: sequencing method

text: P25-oxic shaking-II

characteristic: title


P25-oxic shaking repeat -I

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Lab of microbiology

text: public

text: P25-oxic shaking repeat -I

characteristic: collection date

characteristic: depth

text: Riverbed sediment

characteristic: environment (biome)

text: Riverbed sediment

characteristic: environment (feature)

text: Riverbed sediment

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

text: mimarks-survey

text: uncultured bacterium

text: AQUAREHAB

text: uncultured bacterium

text: sediment

text: MiSeq

text: P25-oxic shaking repeat -I


P25-oxic shaking repeat -II

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Lab of microbiology

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: P25-oxic shaking repeat -II

text: Riverbed sediment

text: Riverbed sediment

text: Riverbed sediment

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: uncultured bacterium

text: AQUAREHAB

characteristic: project name

text: uncultured bacterium

text: sediment

characteristic: sediment environmental package

text: MiSeq

text: P25-oxic shaking repeat -II


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: DUKE UNIV

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:DUKE UNIV

characteristic: Submitter Id

text: ENVO:urban biome

text: soil

text: soil

text: USA

text: metagenome

text: soil metagenome

characteristic: organism

text: soil metagenome

text: Illumina

characteristic: sequencing method

text: soil

characteristic: soil environmental package

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Genoscope CEA

characteristic: INSDC center name

text: public

tag: Namespace:Genoscope CEA

text: Thiomonas sp. X19

text: Thiomonas sp. X19

characteristic: strain

text: Prokaryotic genome sequencing


text: WDRC KAUST

characteristic: INSDC first public

text: public

tag: Namespace:WDRC KAUST

characteristic: collection date

text: J2_batch 1

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text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

text: public

characteristic: INSDC status

text: E-MTAB-4784:TF405_6h_2_10961_GCCAAT_read1.fastq

text: ArrayExpress

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

text: public

characteristic: SRA accession

text: E-MTAB-4784:TF406_6h_1_10966_CGATGT_read1.fastq

text: ArrayExpress

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:TF406_6h_2_10967_TGACCA_read1.fastq

text: ArrayExpress

characteristic: broker name

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:TF407_6h_1_10968_CAGATC_read1.fastq

text: ArrayExpress

characteristic: description

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:TF407_6h_2_10969_CCGTCC_read1.fastq

text: ArrayExpress

characteristic: genotype

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:TF408_6h_1_10970_TTAGGC_read1.fastq

text: ArrayExpress

text: 6 hour growth

characteristic: growth condition

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:TF408_6h_2_10971_GATCAG_read1.fastq

text: ArrayExpress

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

characteristic: phenotype

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:TF409_6h_1_10972_CGATGT_read1.fastq

characteristic: Submitter Id

text: ArrayExpress

text: Protocols: miRNeasy kit from Qiagen (in column DNase) Cells were grown in modified Hayflick medium Strand-specific RNA-seq library, the TruSeq Stranded mRNA Sample Prep Kit v2 (Illumina)

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:TF409_6h_2_10973_CAGATC_read1.fastq

text: ArrayExpress

text: 6 hour growth

text: Mycoplasma pneumoniae M129

characteristic: organism

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:TF410_6h_1_10974_GTGAAA_read1.fastq

text: ArrayExpress

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129

characteristic: title


characteristic: ENA-CHECKLIST

text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:TF410_6h_2_10975_ATCACG_read1.fastq

text: ArrayExpress

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129


characteristic: ENA-FIRST-PUBLIC

text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:TF411_6h_1_10976_TAGCTT_read1.fastq

text: ArrayExpress

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129


characteristic: ENA-LAST-UPDATE

text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:TF411_6h_2_10977_GTGGCC_read1.fastq

text: ArrayExpress

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129


characteristic: External Id

text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:TF412_6h_1_10978_ACAGTG_read1.fastq

text: ArrayExpress

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

characteristic: INSDC center name

text: public

text: E-MTAB-4784:TF412_6h_2_10979_ATGTCA_read1.fastq

text: ArrayExpress

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

characteristic: INSDC first public

text: public

text: E-MTAB-4784:TF413_6h_1_10980_GCCAAT_read1.fastq

text: ArrayExpress

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

characteristic: INSDC last update

text: public

text: E-MTAB-4784:TF413_6h_2_10981_TTAGGC_read1.fastq

text: ArrayExpress

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

text: public

characteristic: INSDC status

text: E-MTAB-4784:TF414_6h_1_10982_GATCAG_read1.fastq

text: ArrayExpress

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

text: public

characteristic: SRA accession

text: E-MTAB-4784:TF414_6h_2_10983_ACTGAT_read1.fastq

text: ArrayExpress

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:TF415_6h_1_11022_ACAGTG_read1.fastq

text: ArrayExpress

characteristic: broker name

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:TF415_6h_2_11023_GCCAAT_read1.fastq

text: ArrayExpress

characteristic: description

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:TF416_6h_1_11024_CTTGTA_read1.fastq

text: ArrayExpress

characteristic: genotype

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:TF416_6h_2_11025_GTGAAA_read1.fastq

text: ArrayExpress

text: 6 hour growth

characteristic: growth condition

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:TF417_6h_1_11026_ATCACG_read1.fastq

text: ArrayExpress

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

characteristic: phenotype

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:TF417_6h_2_11027_ACTTGA_read1.fastq

characteristic: Submitter Id

text: ArrayExpress

text: Protocols: miRNeasy kit from Qiagen (in column DNase) Cells were grown in modified Hayflick medium Strand-specific RNA-seq library, the TruSeq Stranded mRNA Sample Prep Kit v2 (Illumina)

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:TF418_6h_1_11028_CGATGT_read1.fastq

text: ArrayExpress

text: 6 hour growth

text: Mycoplasma pneumoniae M129

characteristic: organism

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:TF418_6h_2_11029_TGACCA_read1.fastq

text: ArrayExpress

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129

characteristic: title


characteristic: ENA-CHECKLIST

text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:TF419_6h_1_11030_CAGATC_read1.fastq

text: ArrayExpress

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129


characteristic: ENA-FIRST-PUBLIC

text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:TF419_6h_2_11031_CCGTCC_read1.fastq

text: ArrayExpress

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129


characteristic: ENA-LAST-UPDATE

text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:TF433_6h_1_11032_TTAGGC_read1.fastq

text: ArrayExpress

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129


characteristic: External Id

text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:TF433_6h_2_11033_GATCAG_read1.fastq

text: ArrayExpress

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

characteristic: INSDC center name

text: public

text: E-MTAB-4784:Tn051_c_1_11016_CGATGT_read1.fastq

text: ArrayExpress

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

characteristic: INSDC first public

text: public

text: E-MTAB-4784:Tn051_c_2_11017_TGACCA_read1.fastq

text: ArrayExpress

text: MPN051 Gene knockin by transposon insertion

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF knockin

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

characteristic: INSDC last update

text: public

text: E-MTAB-4784:Tn051_gly_1_11018_CAGATC_read1.fastq

text: ArrayExpress

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF knockin

text: Mycoplasma pneumoniae M129

text: 1% glycerol for 30 min

characteristic: stimulus


text: Centre for Genomic Regulation

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-4784:Tn051_gly_2_11019_CCGTCC_read1.fastq

text: ArrayExpress

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF knockin

text: Mycoplasma pneumoniae M129

text: 1% glycerol for 30 min


text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:Tn051_suc_1_11020_TTAGGC_read1.fastq

text: ArrayExpress

characteristic: broker name

characteristic: description

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF knockin

text: Mycoplasma pneumoniae M129

text: 1% sucrose for 30 min


text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:Tn051_suc_2_11021_GATCAG_read1.fastq

text: ArrayExpress

characteristic: genotype

text: 6 hour growth

characteristic: growth condition

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF knockin

text: Mycoplasma pneumoniae M129

text: 1% sucrose for 30 min


text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:Tn076_6h_1_11294_CTTGTA_read1.fastq

characteristic: Submitter Id

text: ArrayExpress

text: MPN076 Gene knockin by transposon insertion

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF knockin

characteristic: phenotype

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:Tn076_6h_2_11295_GTGAAA_read1.fastq

text: ArrayExpress

text: 6 hour growth

text: Mycoplasma pneumoniae M129

characteristic: organism

text: Mycoplasma pneumoniae M129

text: TF knockin

text: Mycoplasma pneumoniae M129

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:Tn077_6h_1_11296_AGTTCC_read1.fastq

text: ArrayExpress

text: Protocols: miRNeasy kit from Qiagen (in column DNase) Cells were grown in modified Hayflick medium Strand-specific RNA-seq library, the TruSeq Stranded mRNA Sample Prep Kit v2 (Illumina)

text: MPN077 Gene knockin by transposon insertion

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF knockin

text: Mycoplasma pneumoniae M129


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:Tn077_6h_2_11297_GAGTGG_read1.fastq

text: ArrayExpress

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF knockin

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-4784:Tn133_6h_1_11298_CGATGT_read1.fastq

text: ArrayExpress

text: MPN133 Gene knockin by transposon insertion

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF knockin

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

characteristic: INSDC last update

text: public

text: E-MTAB-4784:Tn133_6h_2_11299_TGACCA_read1.fastq

text: ArrayExpress

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF knockin

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

text: public

characteristic: INSDC status

text: E-MTAB-4784:Tn223_c_1_11010_ACAGTG_read1.fastq

text: ArrayExpress

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF knockin

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

text: public

characteristic: SRA accession

text: E-MTAB-4784:Tn223_c_2_11011_GCCAAT_read1.fastq

text: ArrayExpress

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF knockin

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:Tn223_gly_1_11012_CTTGTA_read1.fastq

text: ArrayExpress

characteristic: broker name

text: MPN051 Gene knockin by transposon insertion

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF knockin

text: Mycoplasma pneumoniae M129

text: 1% glycerol for 30 min

characteristic: stimulus


text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:Tn223_gly_2_11013_GTGAAA_read1.fastq

text: ArrayExpress

characteristic: description

characteristic: genotype

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF knockin

text: Mycoplasma pneumoniae M129

text: 1% glycerol for 30 min


text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:Tn223_suc_1_11014_ATCACG_read1.fastq

characteristic: Submitter Id

text: ArrayExpress

text: 6 hour growth

characteristic: growth condition

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF knockin

text: Mycoplasma pneumoniae M129

text: 1% sucrose for 30 min


text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:Tn223_suc_2_11015_ACTTGA_read1.fastq

text: ArrayExpress

text: 6 hour growth

text: Mycoplasma pneumoniae M129

characteristic: organism

text: Mycoplasma pneumoniae M129

text: TF knockin

characteristic: phenotype

text: Mycoplasma pneumoniae M129

text: 1% sucrose for 30 min


characteristic: ENA-CHECKLIST

text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:Tn284_6h_1_11300_CAGATC_read1.fastq

text: ArrayExpress

text: MPN284 Gene knockin by transposon insertion

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:Tn284_6h_2_11301_CCGTCC_read1.fastq

text: ArrayExpress

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129


characteristic: External Id

text: Centre for Genomic Regulation

characteristic: INSDC center name

text: public

text: E-MTAB-4784:Tn372_6h_1_11302_ATGTCA_read1.fastq

text: ArrayExpress

text: MPN372 Gene knockin by transposon insertion

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-4784:Tn372_6h_2_11303_GTTTCG_read1.fastq

text: ArrayExpress

text: Protocols: miRNeasy kit from Qiagen (in column DNase) Cells were grown in modified Hayflick medium Strand-specific RNA-seq library, the TruSeq Stranded mRNA Sample Prep Kit v2 (Illumina)

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-4784:Tn420_6h_1_11304_ATCACG_read1.fastq

text: ArrayExpress

text: MPN420 Gene knockin by transposon insertion

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:Tn420_6h_2_11305_ACTTGA_read1.fastq

text: ArrayExpress

characteristic: broker name

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:Tn420_gly_6h_1_11306_TAGCTT_read1.fastq

text: ArrayExpress

characteristic: description

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129

text: 1% glycerol for 30 min

characteristic: stimulus


text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:Tn420_gly_6h_2_11307_GGCTAC_read1.fastq

characteristic: Submitter Id

text: ArrayExpress

characteristic: genotype

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129

text: 1% glycerol for 30 min


text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:Tn421_6h_1_11308_AGTCAA_read1.fastq

text: ArrayExpress

text: MPN421 Gene knockin by transposon insertion

text: 6 hour growth

characteristic: growth condition

text: Mycoplasma pneumoniae M129

characteristic: organism

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129


characteristic: ENA-CHECKLIST

text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:Tn421_6h_2_11309_GTGGCC_read1.fastq

text: ArrayExpress

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

characteristic: phenotype

text: Mycoplasma pneumoniae M129


characteristic: ENA-FIRST-PUBLIC

text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:Tn490_6h_1_10964_ATCACG_read1.fastq

text: ArrayExpress

text: MPN490 Gene knockin by transposon insertion

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF knockin

text: Mycoplasma pneumoniae M129

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Centre for Genomic Regulation

text: public

text: E-MTAB-4784:Tn490_6h_2_10965_ACTTGA_read1.fastq

text: ArrayExpress

text: 6 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF knockin

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-4784:Tn674_48h_1_11314_ACTGAT_read1.fastq

text: ArrayExpress

text: MPN674 Gene knockin by transposon insertion

text: 48 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129


text: Centre for Genomic Regulation

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-4784:Tn674_48h_2_11315_GTCCGC_read1.fastq

text: ArrayExpress

text: 48 hour growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: TF overexpression

text: Mycoplasma pneumoniae M129