text: Hatching:Long-pec - ZFS:0000033

characteristic: ArrayExpress-DevelopmentalStage

text: Whole organism

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: mixed

characteristic: ArrayExpress-StrainOrLine

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: zebrafish

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single genotyped zebrafish embryo homozygous for sne, allele ta253a from ZMP phenotype 197 clutch 1, plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GCAACATT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph197

characteristic: sample description

text: Danio rerio

text: mixed

characteristic: strain

characteristic: title


status: PUBLIC

text: Hatching:Long-pec - ZFS:0000033

tag: attribute

text: Whole organism

text: Danio rerio

characteristic: ArrayExpress-Species

text: mixed

characteristic: ENA-CHECKLIST

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: zebrafish

characteristic: common name

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped zebrafish embryo homozygous for sne, allele ta253a from ZMP phenotype 197 clutch 1, plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GAATCTGT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph197

text: Danio rerio

text: mixed


text: Hatching:Long-pec - ZFS:0000033

characteristic: ArrayExpress-DevelopmentalStage

text: Whole organism

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped zebrafish embryo homozygous for sne, allele ta253a from ZMP phenotype 197 clutch 1, plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GAGGTGCT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph197

text: Danio rerio

text: mixed


text: Hatching:Long-pec - ZFS:0000033

text: Whole organism

text: Danio rerio

text: mixed

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped zebrafish embryo homozygous for sne, allele ta253a from ZMP phenotype 197 clutch 1, plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GTTAGCCT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph197

text: Danio rerio

text: mixed


text: Hatching:Long-pec - ZFS:0000033

text: Whole organism

text: Danio rerio

text: mixed

text: SC

text: public

text: zebrafish

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single genotyped zebrafish embryo homozygous for sne, allele ta253a from ZMP phenotype 197 clutch 1, plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GGAATGAT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph197

characteristic: sample description

text: Danio rerio

text: mixed

characteristic: strain


text: Hatching:Long-pec - ZFS:0000033

text: Whole organism

text: Danio rerio

characteristic: ArrayExpress-Species

text: mixed

characteristic: ENA-CHECKLIST

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped zebrafish embryo homozygous for sne, allele ta253a from ZMP phenotype 197 clutch 1, plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GCTCCTTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph197

text: Danio rerio

text: mixed

characteristic: title


text: Hatching:Long-pec - ZFS:0000033

text: Whole organism

text: Danio rerio

text: mixed

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped zebrafish embryo heterozygous for sne, allele ta253a from ZMP phenotype 197 clutch 1, plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GAGGATGG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph197

text: Danio rerio

text: mixed


text: Hatching:Long-pec - ZFS:0000033

text: Whole organism

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped zebrafish embryo heterozygous for sne, allele ta253a from ZMP phenotype 197 clutch 1, plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GGATTAGG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph197

text: Danio rerio

text: mixed


text: Hatching:Long-pec - ZFS:0000033

characteristic: ArrayExpress-DevelopmentalStage

text: Whole organism

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: mixed

text: SC

text: public

text: zebrafish

characteristic: common name

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped zebrafish embryo heterozygous for sne, allele ta253a from ZMP phenotype 197 clutch 1, plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GTGTGTCG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph197

text: Danio rerio

text: mixed


text: Hatching:Long-pec - ZFS:0000033

text: Whole organism

text: Danio rerio

text: mixed

characteristic: ArrayExpress-StrainOrLine

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped zebrafish embryo wild type for sne, allele ta253a from ZMP phenotype 197 clutch 1, plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GACCTTAG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph197

text: Danio rerio

text: mixed


text: Hatching:Long-pec - ZFS:0000033

text: Whole organism

text: Danio rerio

text: mixed

characteristic: External Id

text: SC

text: public

text: zebrafish

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single genotyped zebrafish embryo wild type for sne, allele ta253a from ZMP phenotype 197 clutch 1, plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GCACTGTC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph197

characteristic: sample description

text: Danio rerio

text: mixed


text: Hatching:Long-pec - ZFS:0000033

text: Whole organism

text: Danio rerio

characteristic: ArrayExpress-Species

text: mixed

characteristic: ENA-CHECKLIST

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped zebrafish embryo wild type for sne, allele ta253a from ZMP phenotype 197 clutch 1, plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GATTCATC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph197

text: Danio rerio

text: mixed

characteristic: strain


text: Hatching:Long-pec - ZFS:0000033

text: Whole organism

text: Danio rerio

text: mixed

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped zebrafish embryo homozygous for sne, allele ta253a from ZMP phenotype 197 clutch 1, plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GTACATCT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph197

text: Danio rerio

text: mixed

characteristic: title


text: Hatching:Long-pec - ZFS:0000033

text: Whole organism

text: Danio rerio

text: mixed

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped zebrafish embryo homozygous for sne, allele ta253a from ZMP phenotype 197 clutch 1, plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GTCGCTAT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph197

text: Danio rerio

text: mixed


text: Hatching:Long-pec - ZFS:0000033

characteristic: ArrayExpress-DevelopmentalStage

text: Whole organism

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: Submitter Id

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped zebrafish embryo homozygous for sne, allele ta253a from ZMP phenotype 197 clutch 1, plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GTAAGGTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph197

text: Danio rerio

text: mixed


text: Hatching:Long-pec - ZFS:0000033

text: Whole organism

text: Danio rerio

text: mixed

characteristic: ArrayExpress-StrainOrLine

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: zebrafish

characteristic: common name

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped zebrafish embryo heterozygous for sne, allele ta253a from ZMP phenotype 197 clutch 1, plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GATAGAGG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph197

text: Danio rerio

text: mixed


text: Hatching:Long-pec - ZFS:0000033

text: Whole organism

text: Danio rerio

text: mixed

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: zebrafish

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single genotyped zebrafish embryo wild type for sne, allele ta253a from ZMP phenotype 197 clutch 1, plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GCCTGTTC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph197

text: Danio rerio

text: mixed


text: Hatching:Long-pec - ZFS:0000033

text: Whole organism

text: Danio rerio

characteristic: ArrayExpress-Species

text: mixed

characteristic: ENA-CHECKLIST

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped zebrafish embryo wild type for sne, allele ta253a from ZMP phenotype 197 clutch 1, plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GTCTTGGC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph197

characteristic: sample description

text: Danio rerio

text: mixed


CMV enriched Nanopore-sequenced

text: Oxford Gene Technology

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: CMV enriched Nanopore-sequenced

tag: Namespace:Oxford Gene Technology

text: Cardiff Public Health Laboratory

characteristic: collecting institution

characteristic: collection date

text: GWG Wilkinson

characteristic: collector name

text: CMV enriched Nanopore-sequenced

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

unit: year

characteristic: host age

text: other

characteristic: host behaviour

text: human

characteristic: host common name

text: recovered

characteristic: host disease outcome

text: other

characteristic: host habitat

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: Human herpesvirus 5 strain Merlin

characteristic: isolate

text: Human herpesvirus 5 strain Merlin

characteristic: receipt date

text: other

characteristic: sample capture status

text: Human herpesvirus 5 strain Merlin

text: CMV enriched Nanopore-sequenced


text: Hatching:Long-pec - ZFS:0000033

characteristic: ArrayExpress-DevelopmentalStage

text: Whole organism

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

characteristic: ArrayExpress-Species

text: mixed

characteristic: ArrayExpress-StrainOrLine

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: zebrafish

characteristic: common name

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single genotyped zebrafish embryo homozygous for sne, allele ta253a from ZMP phenotype 197 clutch 1, plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GCATGGCT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph197

characteristic: sample description

text: Danio rerio

text: mixed

characteristic: strain

characteristic: title


text: Hatching:Long-pec - ZFS:0000033

characteristic: ArrayExpress-DevelopmentalStage

text: Whole organism

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

characteristic: ArrayExpress-Species

text: mixed

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped zebrafish embryo heterozygous for sne, allele ta253a from ZMP phenotype 197 clutch 1, plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GTTGTCGG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph197

text: Danio rerio

text: mixed


text: Hatching:Long-pec - ZFS:0000033

text: Whole organism

text: Danio rerio

text: mixed

characteristic: ArrayExpress-StrainOrLine

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped zebrafish embryo wild type for sne, allele ta253a from ZMP phenotype 197 clutch 1, plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GCTAACTC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph197

text: Danio rerio

text: mixed


text: Hatching:Long-pec - ZFS:0000033

text: Whole organism

text: Danio rerio

text: mixed

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped zebrafish embryo homozygous for sne, allele ta253a from ZMP phenotype 197 clutch 1, plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GGTCGTGT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph197

text: Danio rerio

text: mixed


text: Hatching:Long-pec - ZFS:0000033

text: Whole organism

text: Danio rerio

text: mixed

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped zebrafish embryo heterozygous for sne, allele ta253a from ZMP phenotype 197 clutch 1, plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GCAATCCG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph197

text: Danio rerio

text: mixed


text: Hatching:Long-pec - ZFS:0000033

text: Whole organism

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: zebrafish

characteristic: common name

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped zebrafish embryo homozygous for sne, allele ta253a from ZMP phenotype 197 clutch 1, plus ERCC spike mix 2 (Ambion). A 8 base indexing sequence (GAGCCAAT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph197

text: Danio rerio

text: mixed


text: KAUST

text: public

text: Plasmodium ovale curtisi

characteristic: organism

text: Plasmodium ovale curtisi


text: KAUST

text: public

text: Plasmodium ovale wallikeri

text: Plasmodium ovale wallikeri

characteristic: title


text: Streptococcus pneumoniae

text: SC

text: public

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

characteristic: strain


text: KAUST

text: public

text: Plasmodium malariae

text: Plasmodium malariae


text: IPK-Gatersleben

text: public

text: Rye

text: inbred line 7415

characteristic: cultivar

text: totalRNA extracted from antheres without B chromosome

characteristic: description

text: Secale cereale

text: Secale cereale

text: Anth 0B


text: IPK-Gatersleben

text: public

text: Rye

text: inbred line 7415

text: totalRNA extracted from antheres containing the 4 B chromosome

text: Secale cereale

text: Secale cereale

text: Anth 4B


text: IPK-Gatersleben

text: public

text: Rye

text: inbred line 7415

text: totalRNA extracted from leaf/root without B chromosome

text: Secale cereale

text: Secale cereale

text: TrSc 0B


text: IPK-Gatersleben

text: public

text: Rye

text: inbred line 7415

text: totalRNA extracted from leaf/root containing the 4 B chromosome

text: Secale cereale

text: Secale cereale

text: TrSc 4B


sortB

text: IPK-Gatersleben

text: public

text: sortB

text: Rye

text: inbred line 7415

text: amplified DNA of sorted B Chromosome

text: Secale cereale

text: Secale cereale

text: B Chromosome


text: IMPERIAL COLLEGE

text: public

tag: Namespace:IMPERIAL COLLEGE

text: Faeces

characteristic: bio material

text: human gut microbiome

text: Term infant

characteristic: host

text: Faeces

characteristic: note

text: human gut metagenome

text: human gut metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: Standard Library

text: metagenome

text: metagenome

text: synthetic community


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Low Input Library

text: metagenome

text: metagenome

text: synthetic community


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Nextera Library

text: metagenome

text: metagenome

text: synthetic community


text: public

characteristic: Submitter Id

text: Nextera Xt Library

text: metagenome

characteristic: organism

text: metagenome

text: synthetic community


text: NIOO KNAW

text: public

tag: Namespace:NIOO KNAW

characteristic: collection date

unit: m

characteristic: depth

text: terrestrial biome

characteristic: environment (biome)

text: Black Carbon from ADE

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: soil metagenome

characteristic: project name

text: soil metagenome

characteristic: sequencing method

text: soil

characteristic: soil environmental package

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:AP-HP and Paris Cite Sorbonne University

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: Plasma of cancer patients - Pancreas


text: AP-HP and Paris Cite Sorbonne University

text: public

characteristic: Submitter Id

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Plasma of cancer patients - Pancreas


text: IMPERIAL COLLEGE

text: public

text: Faeces

characteristic: bio material

text: human gut microbiome

text: Pre-term infant

characteristic: host

text: Faeces

characteristic: note

text: human gut metagenome

text: human gut metagenome


text: NIH

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: High-Throughput Microdissection for Next-Generation Sequencing

type: has member


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Plasma samples from cancer patients - lung cancer


CMV non-enriched Nanopore-sequenced1

text: Oxford Gene Technology

text: public

text: CMV non-enriched Nanopore-sequenced1

text: Cardiff Public Health Laboratory

characteristic: collecting institution

characteristic: collection date

text: GWG Wilkinson

characteristic: collector name

text: CMV non-enriched Nanopore-sequenced

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: other

characteristic: host behaviour

text: human

characteristic: host common name

text: recovered

characteristic: host disease outcome

text: other

characteristic: host habitat

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: Human herpesvirus 5 strain Merlin

characteristic: isolate

text: Human herpesvirus 5 strain Merlin

characteristic: receipt date

text: other

characteristic: sample capture status

text: Human herpesvirus 5 strain Merlin

text: CMV non-enriched Nanopore-sequenced


MtbH37Rv_10 enriched Nanopore-sequenced

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Oxford Gene Technology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MtbH37Rv_10 enriched Nanopore-sequenced

characteristic: Submitter Id

characteristic: collection date

text: MtbH37Rv_10 enriched Nanopore-sequenced

text: USA

text: not provided

text: human

text: Hospital

characteristic: isolation source

text: Mycobacterium tuberculosis H37Rv

characteristic: organism

text: Mycobacterium tuberculosis H37Rv

text: MtbH37Rv_10 enriched Nanopore-sequenced

characteristic: title


text: UPPSALA UNIVERISTY

text: public

tag: Namespace:UPPSALA UNIVERISTY

text: collared flycatcher

characteristic: common name

text: Ficedula albicollis

text: Ficedula albicollis

text: Collared Flycatcher


text: UNIVERSITY OF KONSTANZ

text: public

tag: Namespace:UNIVERSITY OF KONSTANZ

text: Amphilophus

text: Amphilophus

text: RADseq SE data


text: IMPERIAL COLLEGE

text: public

text: Faeces

characteristic: bio material

text: human gut microbiome

text: human

characteristic: host

text: Faeces

characteristic: note

text: human gut metagenome

text: human gut metagenome


MtbH37Rv_90 enriched Nanopore-sequenced

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Oxford Gene Technology

text: public

text: MtbH37Rv_90 enriched Nanopore-sequenced

text: MtbH37Rv_90 enriched Nanopore-sequenced

characteristic: description

text: USA

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: host health state

text: human

characteristic: host scientific name

characteristic: isolate

text: Hospital

text: Mycobacterium tuberculosis H37Rv

text: Mycobacterium tuberculosis H37Rv

text: MtbH37Rv_90 enriched Nanopore-sequenced


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: URMITE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Culturomics study of the human gut

text: Corynebacterium sp. SN15

text: Corynebacterium sp. SN15

characteristic: strain

text: genome


text: Homo sapiens

characteristic: ArrayExpress-Species

text: SC

text: public

characteristic: Submitter Id

text: human

characteristic: common name

text: Homo sapiens

characteristic: organism

text: Homo sapiens

characteristic: title


MtbC_10 enriched Nanopore-sequenced

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Oxford Gene Technology

text: public

text: MtbC_10 enriched Nanopore-sequenced

characteristic: collection date

text: MtbC_10 enriched Nanopore-sequenced

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: diseased

text: human

text: ENA: ERP006124, doi:10.1128/JCM.02993-14

text: hospital

characteristic: isolation source

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: MtbC_10 enriched Nanopore-sequenced


MtbC_90 enriched Nanopore-sequenced

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Oxford Gene Technology

characteristic: INSDC center name

text: public

text: MtbC_90 enriched Nanopore-sequenced

text: MtbC_90 enriched Nanopore-sequenced

text: United Kingdom

text: diseased

characteristic: host health state

text: human

characteristic: host scientific name

characteristic: isolate

text: hospital

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: MtbC_90 enriched Nanopore-sequenced


text: CEBITEC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Draft genome sequence of Frankia sp. Dg2

text: Datisca glomerata

characteristic: environment (biome)

text: Datisca glomerata

characteristic: environment (feature)

text: Datisca glomerata

characteristic: environment (material)

text: Sweden

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: Frankia sp. Dg2

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

text: Frankia sp. Dg2

text: Illumina MiSeq

characteristic: sequencing method


Sorted BCELL Rep1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GOTHENBURG UNIVERISITY

characteristic: INSDC center name

text: public

text: Sorted BCELL Rep1

tag: Namespace:GOTHENBURG UNIVERISITY

characteristic: Submitter Id

text: human

characteristic: common name

text: Homo sapiens

characteristic: organism

text: Homo sapiens

characteristic: title


Sorted BCELL Rep2

text: GOTHENBURG UNIVERISITY

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Sorted BCELL Rep2

text: human

text: Homo sapiens

text: Homo sapiens


PBMC normal Rep1

text: GOTHENBURG UNIVERISITY

text: public

text: PBMC normal Rep1

text: human

text: Homo sapiens

text: Homo sapiens


PBMC normal Rep2

text: GOTHENBURG UNIVERISITY

text: public

text: PBMC normal Rep2

text: human

text: Homo sapiens

text: Homo sapiens


IGHV-mutated patient 1

text: GOTHENBURG UNIVERISITY

text: public

text: IGHV-mutated patient 1

text: human

text: Homo sapiens

text: Homo sapiens


IGHV-mutated patient 2

text: GOTHENBURG UNIVERISITY

text: public

text: IGHV-mutated patient 2

text: human

text: Homo sapiens

text: Homo sapiens


IGHV-mutated patient 3

text: GOTHENBURG UNIVERISITY

text: public

text: IGHV-mutated patient 3

text: human

text: Homo sapiens

text: Homo sapiens


IGHV-mutated patient 4

text: GOTHENBURG UNIVERISITY

text: public

text: IGHV-mutated patient 4

text: human

text: Homo sapiens

text: Homo sapiens


IGHV-mutated patient 5

text: GOTHENBURG UNIVERISITY

text: public

text: IGHV-mutated patient 5

text: human

text: Homo sapiens

text: Homo sapiens


IGHV-unmutated patient 1

text: GOTHENBURG UNIVERISITY

text: public

text: IGHV-unmutated patient 1

text: human

text: Homo sapiens

text: Homo sapiens


IGHV-unmutated patient 2

text: GOTHENBURG UNIVERISITY

text: public

text: IGHV-unmutated patient 2

text: human

text: Homo sapiens

text: Homo sapiens


IGHV-unmutated patient 3

text: GOTHENBURG UNIVERISITY

text: public

text: IGHV-unmutated patient 3

text: human

text: Homo sapiens

text: Homo sapiens


IGHV-unmutated patient 4

text: GOTHENBURG UNIVERISITY

text: public

text: IGHV-unmutated patient 4

text: human

text: Homo sapiens

text: Homo sapiens


IGHV-unmutated patient 5

text: GOTHENBURG UNIVERISITY

text: public

text: IGHV-unmutated patient 5

text: human

text: Homo sapiens

text: Homo sapiens


text: URMITE

text: public

text: Culturomics study of the human gut microbiota

characteristic: description

text: Murdochiella sp. SIT12

text: Murdochiella sp. SIT12

characteristic: strain

text: genome sequence


text: NEW ENGLAND BIOLABS

text: public

tag: Namespace:NEW ENGLAND BIOLABS

text: metagenome total RNA subject to the cappable-seq protocol

text: mus musculus

characteristic: host

text: metagenome

text: metagenome

text: cecum

characteristic: tissue type

text: Cappable-seq treated metagenomics RNA


characteristic: ENA-CHECKLIST

text: URMITE

text: public

text: Culturomics study of the human gut

text: Clostridium sp. SN17

text: Clostridium sp. SN17

text: Genome sequence


characteristic: ENA-FIRST-PUBLIC

text: URMITE

text: public

text: Culturomics study of the human gut

text: Prevotella sp. SN19

text: Prevotella sp. SN19

text: Bacteria genome sequence


Trichococcus collinsii1

characteristic: ENA-LAST-UPDATE

text: WAGENINGEN UNIVERSITY

text: public

text: Trichococcus collinsii1

tag: Namespace:WAGENINGEN UNIVERSITY

text: 'Comparative genomic and physiological analysis of Trichococcus species .'

text: Trichococcus collinsii

text: Trichococcus collinsii


Trichococcus flocculiformis

characteristic: External Id

text: WAGENINGEN UNIVERSITY

text: public

text: Trichococcus flocculiformis

text: Trichococcus flocculiformis

text: Trichococcus flocculiformis


Trichococcus ES5

text: WAGENINGEN UNIVERSITY

characteristic: INSDC center name

text: public

text: Trichococcus ES5

text: Trichococcus sp. ES5

text: Trichococcus sp. ES5

text: Trichococcus ES5


Trichococcus palustris

text: WAGENINGEN UNIVERSITY

text: public

text: Trichococcus palustris

characteristic: Submitter Id

text: Trichococcus palustris

text: Trichococcus palustris


Trichococcus pasteurii

text: WAGENINGEN UNIVERSITY

text: public

text: Trichococcus pasteurii

text: Trichococcus pasteurii

text: Trichococcus pasteurii

text: ‘Trichococcus pasteurii, Whole genome shotgun sequence.'


Trichococcus R210

text: WAGENINGEN UNIVERSITY

text: public

text: Trichococcus R210

text: Trichococcus sp. R210

text: Trichococcus sp. R210

text: Trichococcus R210


text: INRA JOUY-EN-JOSAS

text: public

tag: Namespace:INRA JOUY-EN-JOSAS

text: cattle

characteristic: common name

text: Bos taurus

text: Bos taurus


text: INRA JOUY-EN-JOSAS

text: public

text: cattle

text: Bos taurus

characteristic: organism

text: Bos taurus


text: public

tag: Namespace:CNRS - CENTRE NATIONAL DE LA RECHERCHE SCIENTIFIQU

text: domicilary

characteristic: ecotype

characteristic: number of inividuals pooled

text: Triatoma aff. brasiliensis MDB-2014

text: Triatoma aff. brasiliensis MDB-2014

text: female

characteristic: sex

text: chemosensory oragans : antenna-rostrum

characteristic: tissue lib

text: Tbra RNASeq

characteristic: title


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Institut National Universitaire Champollion

text: Radix balthica

text: Radix balthica


characteristic: ENA-CHECKLIST

text: Institut National Universitaire Champollion

text: public

text: Radix balthica

text: Radix balthica


characteristic: ENA-FIRST-PUBLIC

text: University of Cambridge

text: public

tag: Namespace:University of Cambridge

text: ArrayExpress

characteristic: broker name

text: embryonic stem cell

characteristic: cell type

text: human

text: Protocols: Human naive embryonic stem (HNES) cells were propagated in modified N2B27 medium supplemented with 1 uM PD0325901 (prepared in house), 1 uM CHIR99021 (prepared in house), 2.5 uM Go6983 (Sigma-Aldrich), 10 uM rho-associated kinase inhibitor (Y-27632, Calbiochem), 10 ng/ml human LIF (prepared in house) and 250 uM ascorbic acid (Sigma). N2B27 medium (1L) comprised 490 mL DMEM/F12 (Life Technologies), 490 mL Neurobasal (Life Technologies), 10 mL B27 (Life Technologies), 5 mL N2 (prepared in house), 10 ug/mL insulin (Sigma), 2 mM L-glutamine (Life Technologies) and 0.1 mM 2-mercaptoethanol (Sigma). N2 contains 100 ug/ml apo-transferrin (eBioscience, ABC2553), 3 uM sodium selenite (Sigma), 1.6 mg/mL putrescine (Sigma) and 2 ug/mL progesterone (Sigma) in DMEM/F-12 (Life Technologies). Cells were cultured in 5% O2, 7% CO2 in a humidified incubator at 37 C. Primed HNES cells were cultured in FGF/KSR medium, comprising 20% KnockOut Serum Replacement (Invitrogen), 1x non-essential amino acids (Invitrogen), 2 mM L-glutamine (Invitrogen), 100 uM 2-mercaptoethanol (Sigma), 10 ng/mL FGF2 (prepared in-house) in DMEM/F-12 basal medium (Sigma-Aldrich). Feeder cells were depleted by culture on gelatin-coated dishes for 40 minutes and harvesting cells in suspension. Pelleted cells were treated with lysis buffer (10 mM Tris-Cl pH 7.4 and 2% SDS) and 0.5 l proteinase K followed by incubation at 37 C for 1 h. Bisulfite conversion was performed on cell lysates. Whole-genome bisulfite libraries were prepared using a post-bisulfite adaptor tagging (PBAT) strategy as previously described (Smallwood et al. Nat Methods 11:817820) with some modifications. Bisulfite conversion was performed on Proteinase K digested cell lysates using the EZ DNA Methylation-Direct MagPrep Kit (Zymo). After purification, first-strand synthesis was performed using 6N-forward oligos for 37C for 30 min. Subsequently, samples were treated with Exonuclease I for 1 hour at 37 C, before DNA was purified using 0.8x Agencourt Ampure XP beads (Beckman Coulter). Samples were eluted in second-strand synthesis mix with 6N-reverse oligo and incubated at 37 C for 90 min. DNA was purified using 0.8x Agencourt Ampure XP beads and amplified with KAPA HiFi HotStart DNA Polymerase (KAPA Biosystems) using indexed iPCRTag primers (Quail et al. Nat Methods 9:10-11). Amplified libraries were pooled, purified using 0.8x Agencourt Ampure XP beads, and assessed for quality and quantity using High-Sensitivity DNA chips on the 2100 Bioanalyzer (Agilent) and the KAPA Library Quantification Kit for Illumina (KAPA Biosystems).

characteristic: description

text: embryo stage

characteristic: developmental stage

text: Homo sapiens

text: Homo sapiens

text: embryo

characteristic: organism part

text: Homo sapiens

text: male


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Cambridge

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: ArrayExpress

text: embryonic stem cell

text: human

characteristic: common name

text: embryo stage

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: embryo

text: Homo sapiens

text: female


text: University of Cambridge

characteristic: INSDC first public

text: public

text: ArrayExpress

text: pluripotent stem cell

text: human

text: embryo stage

text: Homo sapiens

text: Homo sapiens

text: embryo

text: Homo sapiens

text: male

characteristic: sex

characteristic: title


text: University of Cambridge

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ArrayExpress

text: pluripotent stem cell

text: human

text: embryo stage

text: Homo sapiens

text: Homo sapiens

text: embryo

text: Homo sapiens

text: female


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

tag: Namespace:WASHINGTON UNIVERSITY CENTER FOR GENOME SCIENCES

characteristic: collection date

text: gut

characteristic: environment (biome)

text: gut

characteristic: environment (feature)

text: gut

characteristic: environment (material)

text: Malawi

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: gut metagenome

text: iLiNS-DYAD-M

characteristic: project name

text: gut metagenome

text: Illumina

characteristic: sequencing method

text: Fecal 16S


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: WASHINGTON UNIVERSITY CENTER FOR GENOME SCIENCES

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: gut metagenome

characteristic: common name

text: Human fecal bacterial V4-16S rRNA

characteristic: description

text: gut

text: gut

text: fecal sample

text: Malawi

text: human-gut

text: metagenome

text: gut metagenome

characteristic: organism

text: iLiNS-DYAD-M

text: gut metagenome

text: Illumina

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: MONASH UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:MONASH UNIVERSITY

text: Peptoclostridium difficile strain 8352

text: Peptoclostridium difficile

text: Peptoclostridium difficile

characteristic: strain

text: Peptoclostridium difficile strain 8352


text: MONASH UNIVERSITY

text: public

text: Peptoclostridium difficile strain 8371

text: Peptoclostridium difficile

text: Peptoclostridium difficile

text: Peptoclostridium difficile strain 8371


text: MONASH UNIVERSITY

text: public

text: Peptoclostridium difficile strain 8373

text: Peptoclostridium difficile

text: Peptoclostridium difficile

text: Peptoclostridium difficile strain 8373


text: MONASH UNIVERSITY

text: public

text: Peptoclostridium difficile strain 8378

text: Peptoclostridium difficile

text: Peptoclostridium difficile

text: Peptoclostridium difficile strain 8378


text: MONASH UNIVERSITY

text: public

text: Peptoclostridium difficile strain 8394

text: Peptoclostridium difficile

text: Peptoclostridium difficile

text: Peptoclostridium difficile strain 8394


text: MONASH UNIVERSITY

text: public

text: Peptoclostridium difficile strain 8395

text: Peptoclostridium difficile

text: Peptoclostridium difficile

text: Peptoclostridium difficile strain 8395


text: MONASH UNIVERSITY

text: public

text: Peptoclostridium difficile strain 8504

text: Peptoclostridium difficile

text: Peptoclostridium difficile

text: Peptoclostridium difficile strain 8504


text: MONASH UNIVERSITY

text: public

text: Peptoclostridium difficile strain 8556

text: Peptoclostridium difficile

text: Peptoclostridium difficile

text: Peptoclostridium difficile strain 8556


text: MONASH UNIVERSITY

text: public

text: Peptoclostridium difficile strain 8560

text: Peptoclostridium difficile

text: Peptoclostridium difficile

text: Peptoclostridium difficile strain 8560


text: MONASH UNIVERSITY

text: public

text: Peptoclostridium difficile strain CD106

text: Peptoclostridium difficile

text: Peptoclostridium difficile

text: Peptoclostridium difficile strain CD106


text: MONASH UNIVERSITY

text: public

text: Peptoclostridium difficile strain CD117

text: Peptoclostridium difficile

text: Peptoclostridium difficile

text: Peptoclostridium difficile strain CD117


text: MONASH UNIVERSITY

text: public

text: Peptoclostridium difficile strain CD119

text: Peptoclostridium difficile

text: Peptoclostridium difficile

text: Peptoclostridium difficile strain CD119


text: MONASH UNIVERSITY

text: public

text: Peptoclostridium difficile strain CD12

text: Peptoclostridium difficile

text: Peptoclostridium difficile

text: Peptoclostridium difficile strain CD12


text: MONASH UNIVERSITY

text: public

text: Peptoclostridium difficile strain CD130

text: Peptoclostridium difficile

text: Peptoclostridium difficile

text: Peptoclostridium difficile strain CD130


text: MONASH UNIVERSITY

text: public

text: Peptoclostridium difficile strain DLL3026

text: Peptoclostridium difficile

text: Peptoclostridium difficile


text: Staphylococcus aureus

characteristic: ArrayExpress-Species

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: Staphylococcus aureus

text: Staphylococcus aureus

text: genomic DNA

characteristic: sample description

text: Staphylococcus aureus

text: Staphylococcus aureus


text: Bordetella Pertussis

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: Bordetella Pertussis

text: Bordetella pertussis

text: genomic DNA

text: Bordetella pertussis

text: Bordetella Pertussis


text: CEBITEC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: collection date

characteristic: depth

text: Amplicon sequencing of four biogas plants

text: biogas plant

characteristic: environment (biome)

text: biogas plant

characteristic: environment (feature)

text: plant material

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: metagenome

characteristic: project name

text: metagenome

text: Illumina MiSeq System

characteristic: sequencing method

text: soil

characteristic: soil environmental package


text: Salmonella pullorum

characteristic: ArrayExpress-Species

characteristic: ArrayExpress-StrainOrLine

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Salmonella pullorum

characteristic: common name

text: Salmonella enterica subsp. enterica serovar Pullorum

characteristic: organism

text: genomic DNA

characteristic: sample description

characteristic: strain

text: Salmonella pullorum

characteristic: title


XD

characteristic: External Id

text: INSTITUTE OF CANCER RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: XD

tag: Namespace:INSTITUTE OF CANCER RESEARCH

text: LoVo

characteristic: cell line

text: human

text: Homo sapiens

text: Homo sapiens

text: colorectal cancer

characteristic: tissue type

text: Lovo xeno flank R


XDL

tag: attribute

characteristic: ENA-CHECKLIST

text: INSTITUTE OF CANCER RESEARCH

text: public

text: XDL

text: LoVo

text: human

text: Homo sapiens

text: Homo sapiens

text: colorectal cancer

text: Lovo xeno flank L


characteristic: ENA-FIRST-PUBLIC

text: INSTITUTE OF CANCER RESEARCH

text: public

text: LoVo

text: human

text: Homo sapiens

text: Homo sapiens

text: colorectal cancer

text: Lovo reference


fluA cDNA enriched Illumina-sequenced1

characteristic: ENA-LAST-UPDATE

text: Oxford Gene Technology

text: public

text: fluA cDNA enriched Illumina-sequenced1

tag: Namespace:Oxford Gene Technology

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: fluA cDNA enriched Illumina-sequenced

characteristic: description

text: Puerto Rico

characteristic: geographic location (country and/or sea)

text: 18.4500° N

characteristic: geographic location (latitude)

text: 66.1000° W

characteristic: geographic location (longitude)

characteristic: host age

text: MDCK Cocker Spaniel kidney cell line

characteristic: host common name

text: MDCK Cocker Spaniel kidney cell line

characteristic: host scientific name

text: not provided

characteristic: host sex

text: MDCK Cocker Spaniel kidney cell line

characteristic: host subject id

text: culture

characteristic: influenza test method

text: culture

characteristic: influenza test result

text: Influenza A virus (A/Puerto Rico/8/1934(H1N1))

text: no

characteristic: other pathogens tested

characteristic: receipt date

text: fluA cDNA enriched Illumina-sequenced


CMV enriched Illumina-sequenced 1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Oxford Gene Technology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: CMV enriched Illumina-sequenced 1

characteristic: Submitter Id

text: Cardiff Public Health Laboratory

text: GWG Wilkinson

text: CMV enriched Illumina-sequenced

text: United Kingdom

text: human

text: Homo sapiens

text: not provided

text: not provided

text: Human herpesvirus 5 strain Merlin

characteristic: isolate

text: Human herpesvirus 5 strain Merlin

characteristic: organism

text: Human herpesvirus 5 strain Merlin

text: CMV enriched Illumina-sequenced

characteristic: title

text: Human herpesvirus 5 strain Merlin

characteristic: virus identifier


name: CMV enriched control Illumina-sequenced 1

text: Oxford Gene Technology

text: public

text: Cardiff Public Health Laboratory

characteristic: collecting institution

characteristic: collection date

text: GWG Wilkinson

characteristic: collector name

text: CMV enriched control Illumina-sequenced (short fragments)

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: Human herpesvirus 5 strain Merlin

text: Human herpesvirus 5 strain Merlin

text: Human herpesvirus 5 strain Merlin

text: CMV enriched control Illumina-sequenced


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ICL-SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens


text: public

characteristic: collection date

text: gut metagenome

text: Human fecal bacterial V4-16S rRNA

characteristic: description

text: gut

characteristic: environment (biome)

text: gut

characteristic: environment (feature)

text: fecal sample

characteristic: environment (material)

text: Malawi

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: gut metagenome

characteristic: organism

text: iLiNS-DYAD-M

characteristic: project name

text: gut metagenome

text: Illumina

characteristic: sequencing method

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: TU MUENCHEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:TU MUENCHEN

text: cattle

text: Swedish Red Cattle Breed

characteristic: ecotype

text: Bos taurus

text: Bos taurus

text: male

characteristic: sex

text: Sperm

characteristic: tissue type

text: Bull with a tail stump sperm defect


text: WAGENINGEN UNIVERSITY

text: public

characteristic: Submitter Id

characteristic: description

text: Trichococcus collinsii

text: Trichococcus collinsii


text: public

tag: Namespace:School of Marine and Environmental Affairs

characteristic: collection date

text: coastal water body

characteristic: environment (biome)

text: low tide zone

characteristic: environment (feature)

text: caostal sea water

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: seawater metagenome

characteristic: organism

text: primer index bias

characteristic: project name

text: seawater metagenome

text: Illumina Miseq

text: primer index bias

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: School of Marine and Environmental Affairs

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: coastal water body

text: low tide zone

text: caostal sea water

text: USA

text: mimarks-survey

text: seawater metagenome

text: primer index bias

text: seawater metagenome

text: Illumina Miseq

characteristic: sequencing method

text: primer index bias

characteristic: title

text: water


text: GeneWiz

text: public

characteristic: Submitter Id

characteristic: collection date

text: CORAL REEF

characteristic: environment (biome)

text: harbor

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

text: Mycale grandis

text: bacterial and fungal diversity in Mycale grandis

text: Mycale grandis

text: 454 pyrosequencing

text: bacterial diversity in Mycale grandis


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: GeneWiz

text: public

text: CORAL REEF

text: harbor

text: water

text: USA

characteristic: geographic location (longitude)

text: host-associated

text: metagenome

characteristic: investigation type

text: Mycale grandis

characteristic: organism

characteristic: project name

text: Mycale grandis

text: 454 pyrosequencing

text: fungal diversity in Mycale grandis


characteristic: External Id

text: CHINESE ACADEMIC OF SCIENCE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:CHINESE ACADEMIC OF SCIENCE

characteristic: depth

text: alpine meadow

text: soil

text: soil

text: China

characteristic: geographic location (elevation)

text: metagenome

text: soil metagenome

text: land cover conversion on soil bacterial communities

text: soil metagenome

text: High-throughput sequencing

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: soil bacterial communities


characteristic: ENA-CHECKLIST

text: CHINESE ACADEMIC OF SCIENCE

text: public

characteristic: Submitter Id

characteristic: collection date

text: alpine meadow

characteristic: environment (biome)

text: soil

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: metagenome

text: soil metagenome

text: soil metagenome

text: High-throughput sequencing

text: soil

text: soil bacterial communities

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CHINESE ACADEMIC OF SCIENCE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: artificial grassland

text: soil

text: soil

text: China

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: soil metagenome

characteristic: organism

characteristic: project name

text: soil metagenome

text: High-throughput sequencing

text: soil

text: soil bacterial communities


characteristic: ENA-CHECKLIST

text: CHINESE ACADEMIC OF SCIENCE

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: depth

text: mound-shaped denuded land

text: soil

text: soil

text: China

characteristic: geographic location (elevation)

text: metagenome

text: soil metagenome

text: soil metagenome

text: High-throughput sequencing

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: soil bacterial communities


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CHINESE ACADEMIC OF SCIENCE

text: public

characteristic: collection date

text: cultivated land

characteristic: environment (biome)

text: soil

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: metagenome

text: soil metagenome

text: soil metagenome

text: High-throughput sequencing

text: soil

text: soil bacterial communities

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: CHINESE ACADEMIC OF SCIENCE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: cultivated land

text: soil

text: soil

text: China

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: soil metagenome

characteristic: organism

characteristic: project name

text: soil metagenome

text: High-throughput sequencing

text: soil

text: soil bacterial communities


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CHINESE ACADEMIC OF SCIENCE

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: depth

text: forest land

text: soil

text: soil

text: China

characteristic: geographic location (elevation)

text: metagenome

text: soil metagenome

text: soil metagenome

text: High-throughput sequencing

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: soil bacterial communities


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UNIVERSITY OF EDINBURGH

text: public

tag: Namespace:UNIVERSITY OF EDINBURGH

text: metagenomes

text: metagenomes

text: Soil Metagenomics

characteristic: title


text: NEIKER TECNALIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:NEIKER TECNALIA

characteristic: collection date

text: soil metagenome

characteristic: common name

characteristic: description

text: Soil

characteristic: environment (biome)

text: Grassland

characteristic: environment (feature)

text: Soil

characteristic: environment (material)

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: mimarks-survey

unit: ºC

characteristic: mean annual and seasonal temperature

text: soil metagenome

text: soil metagenome

text: MiSeq

text: soil


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: gut metagenome

text: Human fecal bacterial V4-16S rRNA

text: gut

text: gut

text: fecal sample

text: Malawi

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: gut metagenome

characteristic: organism

text: Screen

characteristic: project name

text: gut metagenome

text: Illumina

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: collection date

text: gut metagenome

characteristic: common name

text: Human fecal bacterial V4-16S rRNA

characteristic: description

text: gut

characteristic: environment (biome)

text: gut

text: fecal sample

text: Malawi

text: human-gut

text: metagenome

text: gut metagenome

text: gut metagenome

text: Illumina

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: gut metagenome

text: Human fecal bacterial V4-16S rRNA

text: gut

text: gut

characteristic: environment (feature)

text: fecal sample

characteristic: environment (material)

text: Malawi

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: human-gut

text: metagenome

text: gut metagenome

text: Cohousing 1

text: gut metagenome

text: Illumina


characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

text: public

text: gut metagenome

text: Human fecal bacterial V4-16S rRNA

text: gut

text: gut

text: fecal sample

text: Malawi

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: gut metagenome

characteristic: organism

text: Cohousing 2

characteristic: project name

text: gut metagenome

text: Illumina

characteristic: sequencing method


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: PUBLIC HEALTH ENGLAND

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:PUBLIC HEALTH ENGLAND

characteristic: collection date

text: United Kingdom

text: not provided

characteristic: host health state

text: human

characteristic: host scientific name

text: culture

characteristic: isolate

text: Escherichia coli

text: Escherichia coli

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: PUBLIC HEALTH ENGLAND

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: laboratory

text: culture

text: laboratory

characteristic: isolation source

text: Escherichia coli

text: Escherichia coli

text: EC-1 mutant 1


text: PUBLIC HEALTH ENGLAND

characteristic: INSDC center name

text: public

text: United Kingdom

text: laboratory

text: culture

text: laboratory

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: EC-1 mutant 2


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: PUBLIC HEALTH ENGLAND

text: public

text: United Kingdom

text: laboratory

text: culture

text: laboratory

text: Escherichia coli

text: Escherichia coli

text: EC-1 mutant 3


text: PUBLIC HEALTH ENGLAND

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: United Kingdom

text: laboratory

text: culture

text: laboratory

text: Escherichia coli

text: Escherichia coli

text: EC-1 mutant 4


text: PUBLIC HEALTH ENGLAND

text: public

characteristic: collection date

text: United Kingdom

text: not provided

characteristic: host health state

text: human

text: culture

text: Escherichia coli

text: Escherichia coli

text: EC-2 parent


text: PUBLIC HEALTH ENGLAND

text: public

text: United Kingdom

text: laboratory

characteristic: host scientific name

text: culture

characteristic: isolate

text: laboratory

text: Escherichia coli

text: Escherichia coli

text: EC-2 mutant 1


characteristic: ENA-CHECKLIST

text: PUBLIC HEALTH ENGLAND

text: public

text: United Kingdom

text: laboratory

text: culture

text: laboratory

text: Escherichia coli

text: Escherichia coli

text: EC-2 mutant 2

characteristic: title


characteristic: External Id

text: PUBLIC HEALTH ENGLAND

text: public

characteristic: INSDC status

text: United Kingdom

text: laboratory

text: culture

text: laboratory

text: Escherichia coli

text: Escherichia coli

text: EC-2 mutant 3


text: PUBLIC HEALTH ENGLAND

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: United Kingdom

text: laboratory

text: culture

text: laboratory

text: Escherichia coli

text: Escherichia coli

text: EC-2 mutant 4


text: PUBLIC HEALTH ENGLAND

text: public

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: not provided

text: human

text: culture

text: Escherichia coli

text: Escherichia coli

text: EC-3 parent


text: PUBLIC HEALTH ENGLAND

characteristic: INSDC center name

text: public

text: United Kingdom

text: laboratory

text: culture

text: laboratory

characteristic: isolation source

text: Escherichia coli

text: Escherichia coli

text: EC-3 mutant 1


characteristic: ENA-FIRST-PUBLIC

text: PUBLIC HEALTH ENGLAND

text: public

text: United Kingdom

text: laboratory

text: culture

text: laboratory

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: EC-3 mutant 3


characteristic: ENA-LAST-UPDATE

text: PUBLIC HEALTH ENGLAND

characteristic: INSDC first public

text: public

text: United Kingdom

text: laboratory

text: culture

text: laboratory

text: Escherichia coli

text: Escherichia coli

text: EC-3 mutant 4


text: PUBLIC HEALTH ENGLAND

characteristic: INSDC last update

text: public

characteristic: collection date

text: United Kingdom

text: not provided

text: human

text: culture

text: Escherichia coli

text: Escherichia coli

text: EC-4 parent


text: PUBLIC HEALTH ENGLAND

text: public

text: United Kingdom

text: laboratory

characteristic: host scientific name

text: culture

text: laboratory

text: Escherichia coli

text: Escherichia coli

text: EC-4 mutant 1


text: PUBLIC HEALTH ENGLAND

text: public

text: United Kingdom

text: laboratory

text: culture

characteristic: isolate

text: laboratory

text: Escherichia coli

text: Escherichia coli

text: EC-4 mutant 2


characteristic: ENA-CHECKLIST

text: PUBLIC HEALTH ENGLAND

text: public

text: United Kingdom

text: laboratory

text: culture

text: laboratory

text: Escherichia coli

text: Escherichia coli

text: EC-4 mutant 3


text: PUBLIC HEALTH ENGLAND

text: public

text: United Kingdom

text: laboratory

text: culture

text: laboratory

text: Escherichia coli

text: Escherichia coli

text: EC-4 mutant 4

characteristic: title


characteristic: External Id

text: PUBLIC HEALTH ENGLAND

text: public

text: United Kingdom

text: not provided

characteristic: host health state

text: human

text: culture

text: Escherichia coli

text: Escherichia coli

text: EC-5 parent


text: PUBLIC HEALTH ENGLAND

text: public

characteristic: INSDC status

characteristic: SRA accession

text: United Kingdom

text: laboratory

text: culture

text: laboratory

text: Escherichia coli

text: Escherichia coli

text: EC-5 mutant 1


text: PUBLIC HEALTH ENGLAND

text: public

characteristic: Submitter Id

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: laboratory

text: culture

text: laboratory

text: Escherichia coli

text: Escherichia coli

text: EC-5 mutant 2


text: PUBLIC HEALTH ENGLAND

characteristic: INSDC center name

text: public

text: United Kingdom

text: laboratory

text: culture

text: laboratory

characteristic: isolation source

text: Escherichia coli

text: Escherichia coli

text: EC-5 mutant 5


characteristic: ENA-FIRST-PUBLIC

text: PUBLIC HEALTH ENGLAND

text: public

text: United Kingdom

text: laboratory

text: culture

text: laboratory

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: EC-5 mutant 4


CECT 9029

characteristic: ENA-LAST-UPDATE

text: UVEG

characteristic: INSDC first public

text: public

text: CECT 9029

text: sea water

characteristic: environment (biome)

text: surface sea water

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: Mediterranean Sea

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: Grimontia celer

text: Whole genome sequencing of Grimontia sp. CECT 9029

characteristic: project name

text: Grimontia celer

text: Illumina Miseq

characteristic: sequencing method

text: CECT 9029

characteristic: strain

text: Grimontia sp. CECT 9029

text: water

characteristic: water environmental package


CECT 8713

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UVEG

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: CECT 8713

characteristic: Submitter Id

characteristic: collection date

text: sea water

text: surface sea water

text: water

text: China

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: Grimontia marina

text: Whole genome sequencing of Grimontia marina CECT 8713, type strain

text: Grimontia marina

text: Illumina Miseq

text: CECT 8713

text: Grimontia marina CECT 8713, type strain

characteristic: title

text: water


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: WAGENINGEN UNIVERSITY

characteristic: INSDC first public

text: public

characteristic: description

text: Trichococcus sp. ES5

characteristic: organism

text: Trichococcus sp. ES5


text: WAGENINGEN UNIVERSITY

text: public

text: Trichococcus palustris

text: Trichococcus palustris


MtbC_90 enriched Illumina-sequenced

text: Oxford Gene Technology

text: public

text: MtbC_90 enriched Illumina-sequenced

text: MtbC_90 enriched Illumina-sequenced

text: United Kingdom

text: not provided

characteristic: host health state

text: human

characteristic: host scientific name

text: ENA: ERP006124, doi:10.1128/JCM.02993-14

characteristic: isolate

text: hospital

characteristic: isolation source

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: MtbC_90 enriched Illumina-sequenced


MtbC_10 enriched Illumina-sequenced1

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Oxford Gene Technology

characteristic: INSDC center name

text: public

text: MtbC_10 enriched Illumina-sequenced1

text: United Kingdom

text: not provided

text: human

text: hospital

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: MtbC_10 enriched Illumina-sequenced


MtbH37Rv_90 enriched Illumina-sequenced

text: Oxford Gene Technology

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MtbH37Rv_90 enriched Illumina-sequenced

text: MtbH37Rv_90 enriched Illumina-sequenced

text: USA

text: not provided

text: human

text: Hospital

text: Mycobacterium tuberculosis H37Rv

text: Mycobacterium tuberculosis H37Rv

text: MtbH37Rv_90 enriched Illumina-sequenced


MtbH37Rv_10 enriched Illumina-sequenced

text: Oxford Gene Technology

text: public

text: MtbH37Rv_10 enriched Illumina-sequenced

characteristic: Submitter Id

characteristic: collection date

text: MtbH37Rv_10 enriched Illumina-sequenced

text: USA

characteristic: geographic location (country and/or sea)

text: not provided

text: human

text: hospital

text: Mycobacterium tuberculosis H37Rv

text: Mycobacterium tuberculosis H37Rv

text: MtbH37Rv_10 enriched Illumina-sequenced


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: WAGENINGEN UNIVERSITY

text: public

text: Trichococcus pasteurii

text: Trichococcus pasteurii

characteristic: title


text: Homo sapiens

characteristic: ArrayExpress-Species

text: SC

characteristic: INSDC first public

text: public

text: human

characteristic: common name

text: Homo sapiens

characteristic: organism

text: Homo sapiens


text: WAGENINGEN UNIVERSITY

text: public

characteristic: description

text: Trichococcus sp. R210

text: Trichococcus sp. R210


characteristic: ENA-CHECKLIST

text: University of Cambridge

text: public

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: embryonic stem cell

characteristic: cell type

text: human

text: Protocols: Human naive embryonic stem (HNES) cells were propagated in modified N2B27 medium supplemented with 1 uM PD0325901 (prepared in house), 1 uM CHIR99021 (prepared in house), 2.5 uM Go6983 (Sigma-Aldrich), 10 uM rho-associated kinase inhibitor (Y-27632, Calbiochem), 10 ng/ml human LIF (prepared in house) and 250 uM ascorbic acid (Sigma). N2B27 medium (1L) comprised 490 mL DMEM/F12 (Life Technologies), 490 mL Neurobasal (Life Technologies), 10 mL B27 (Life Technologies), 5 mL N2 (prepared in house), 10 ug/mL insulin (Sigma), 2 mM L-glutamine (Life Technologies) and 0.1 mM 2-mercaptoethanol (Sigma). N2 contains 100 ug/ml apo-transferrin (eBioscience, ABC2553), 3 uM sodium selenite (Sigma), 1.6 mg/mL putrescine (Sigma) and 2 ug/mL progesterone (Sigma) in DMEM/F-12 (Life Technologies). Cells were cultured in 5% O2, 7% CO2 in a humidified incubator at 37 C. Feeder cells were depleted by culture on gelatin-coated dishes for 40 minutes and harvesting cells in suspension. Total RNA was extracted with the TRIzol/chloroform method (Invitrogen), followed by re-suspension in RNAsecure (Ambion), incubation with TURBO DNase (Ambion) at 37 C for 1 hour, and further phenol/chloroform extraction and ethanol precipitation. RNA integrity was assessed with the RNA 6000 Nano assay on the 2100 Bioanalyzer (Agilent). Ribosomal RNA was depleted from 5 ug of total RNA using Ribo-Zero capture probes (Epicentre). RNA samples were sheared by ultrasonication on a Covaris S2 for 90 s set at Duty Cycle 10, Cycles per Burst 200 and Intensity 5. Fragmented RNA was reverse-transcribed with a combination of random hexamer and oligo-dT primers (New England Biolabs) by SuperScript III (Invitrogen) at 50 C for 2 hours in the presence of 6 ug/mL actinomycin D (Sigma) to inhibit formation of second-strand products (Perocchi et al. Nucleic Acids Res 35:e128). Second-strand cDNA was synthesized by DNA Polymerase I in the presence of RNase H with dUTPs substituted for dTTPs at 16 C for 2 hours. Sequential end repair and 30-adenylation of cDNA products were carried out with T4 DNA polymerase and T4 polynucleotide kinase (20 C), and with exo- Klenow fragment (65 C) in the presence of dATPs (New England BioLabs). Products were ligated to barcoded adapters (NEXTflex-96, Bioo Scientific) by T4 DNA ligase (New England BioLabs) at 20 C for 30 min. Second-strand DNA was digested with uracil DNA glycosylase (UDG) and Endonuclease VIII at 37 C for 30 min. PCR amplification of first-strand library constructs was carried out with KAPA HiFi DNA polymerase (KAPA Biosystems) for 13 cycles using denaturing and annealing conditions optimized for even A/T versus G/C processing (Aird et al. Genome Biol 12:R18). Purification of reaction products at each step was performed with Ampure XP paramagnetic beads (Beckman Coulter). Library size distribution and molarity were assessed by DNA 1000 micrifluidic chips on the 2100 Bioanalyzer (Agilent).

text: embryo stage

characteristic: developmental stage

text: Homo sapiens

text: Homo sapiens

text: embryo

characteristic: organism part

text: Homo sapiens

text: male

characteristic: sex


characteristic: External Id

text: University of Cambridge

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: embryonic stem cell

text: human

text: embryo stage

text: Homo sapiens

text: Homo sapiens

text: embryo

text: Homo sapiens

text: female


MtbH37Rv control Illumina-sequenced

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Oxford Gene Technology

characteristic: INSDC first public

text: public

text: MtbH37Rv control Illumina-sequenced

characteristic: collection date

text: MtbH37Rv control Illumina-sequenced

text: USA

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: host health state

text: human

characteristic: host scientific name

characteristic: isolate

text: hospital

characteristic: isolation source

text: Mycobacterium tuberculosis H37Rv

text: Mycobacterium tuberculosis H37Rv

text: MtbH37Rv control Illumina-sequenced

characteristic: title


MtbC control Illumina-sequenced

characteristic: ENA-CHECKLIST

text: Oxford Gene Technology

text: public

text: MtbC control Illumina-sequenced

text: MtbC control short fragments Illumina-sequenced

characteristic: description

text: United Kingdom

text: not provided

text: human

text: hospital

text: Mycobacterium tuberculosis

characteristic: organism

text: Mycobacterium tuberculosis

text: MtbC control Illumina-sequenced


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

tag: Namespace:Toxicogenomics Department Maastricht Universtiy

characteristic: biological replicate

text: ArrayExpress

characteristic: broker name

text: Primary Human Hepatocytes

characteristic: cell line

text: Hepatocytes

characteristic: cell type

text: human

characteristic: common name

text: Protocols: Primary human hepatocytes (PHH) were exposed daily for 5 days to 15 mM VPA after which DNA was isolated. After terminating the VPA treatment, part of the cells were kept with medium for 3 days (washout-period (WO-period)) in order to investigate the eventual persistence of VPA-induced methylome changes. Starting from the Methylated DNA samples, methylated DNAs were size selected and ligated for sequencing following the TruSeqTM SBS Kit v3 paired-end by sequencing by synthesis (SBS)

text: Homo sapiens

text: Homo sapiens

characteristic: read

text: Homo sapiens

unit: day

characteristic: time


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Toxicogenomics Department Maastricht Universtiy

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: Primary Human Hepatocytes

text: Hepatocytes

text: human

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens


characteristic: ENA-CHECKLIST

text: UPSC

text: public

text: Norway spruce

text: Germinants without shoot (A aberrant type ) biological replicates 1 obtained in SE lab UPSC

characteristic: description

text: Picea abies

characteristic: organism

text: Picea abies

text: Somatic germinants of Norway spruce AR1

characteristic: title


characteristic: External Id

text: UPSC

characteristic: INSDC center name

characteristic: INSDC last update

text: public

text: Norway spruce

text: Germinants without shoot (A aberrant type ) biological replicates 2 obtained in SE lab UPSC

text: Picea abies

text: Picea abies

text: Somatic germinants of Norway spruce AR2


text: UPSC

text: public

text: Norway spruce

text: Germinants without shoot (A aberrant type ) biological replicates 3 obtained in SE lab UPSC

text: Picea abies

text: Picea abies

text: Somatic germinants of Norway spruce AR3


text: UPSC

text: public

text: Norway spruce

text: Germinants without shoot (A aberrant type ) biological replicates 4 obtained in SE lab UPSC

text: Picea abies

text: Picea abies

text: Somatic germinants of Norway spruce AR4


text: UPSC

text: public

text: Norway spruce

text: Germinants without shoot (A aberrant type ) biological replicates 5 obtained in SE lab UPSC

text: Picea abies

text: Picea abies

text: Somatic germinants of Norway spruce AR5


text: UPSC

text: public

text: Norway spruce

text: Germinants without shoot (A aberrant type ) biological replicates 7 obtained in SE lab UPSC

text: Picea abies

text: Picea abies

text: Somatic germinants of Norway spruce AR7


text: UPSC

text: public

text: Norway spruce

text: Germinants without shoot (A aberrant type ) biological replicates 8 obtained in SE lab UPSC

text: Picea abies

text: Picea abies

text: Somatic germinants of Norway spruce AR8


text: UPSC

text: public

text: Norway spruce

text: Germinants without shoot (A aberrant type ) biological replicates 9 obtained in SE lab UPSC

text: Picea abies

text: Picea abies

text: Somatic germinants of Norway spruce AR9


text: UPSC

text: public

text: Norway spruce

text: Germinants without shoot (A aberrant type ) biological replicates 10 obtained in SE lab UPSC

text: Picea abies

text: Picea abies

text: Somatic germinants of Norway spruce AR10


text: UPSC

text: public

text: Norway spruce

text: Germinants with normal shoot (N normal type) biological replicates 1 obtained in SE lab UPSC

text: Picea abies

text: Picea abies

text: Somatic germinants of Norway spruce NR1


text: UPSC

text: public

text: Norway spruce

text: Germinants with normal shoot (N normal type) biological replicates 2 obtained in SE lab UPSC

text: Picea abies

text: Picea abies

text: Somatic germinants of Norway spruce NR2


text: UPSC

text: public

text: Norway spruce

text: Germinants with normal shoot (N normal type) biological replicates 3 obtained in SE lab UPSC

text: Picea abies

text: Picea abies

text: Somatic germinants of Norway spruce NR3


text: UPSC

text: public

text: Norway spruce

text: Germinants with normal shoot (N normal type) biological replicates 4 obtained in SE lab UPSC

text: Picea abies

text: Picea abies

text: Somatic germinants of Norway spruce NR4


text: UPSC

text: public

text: Norway spruce

text: Germinants with normal shoot (N normal type) biological replicates 5 obtained in SE lab UPSC

text: Picea abies

text: Picea abies

text: Somatic germinants of Norway spruce NR5


text: UPSC

text: public

text: Norway spruce

text: Germinants with normal shoot (N normal type) biological replicates 6 obtained in SE lab UPSC

text: Picea abies

text: Picea abies

text: Somatic germinants of Norway spruce NR6


text: UPSC

text: public

text: Norway spruce

text: Germinants with normal shoot (N normal type) biological replicates 7 obtained in SE lab UPSC

text: Picea abies

text: Picea abies

text: Somatic germinants of Norway spruce NR7


text: UPSC

text: public

text: Norway spruce

text: Germinants with normal shoot (N normal type) biological replicates 8 obtained in SE lab UPSC

text: Picea abies

text: Picea abies

text: Somatic germinants of Norway spruce NR8


text: UPSC

text: public

text: Norway spruce

text: Germinants with normal shoot (N normal type) biological replicates 9 obtained in SE lab UPSC

text: Picea abies

text: Picea abies

text: Somatic germinants of Norway spruce NR9


text: UPSC

text: public

text: Norway spruce

text: Germinants with normal shoot (N normal type) biological replicates 10 obtained in SE lab UPSC

text: Picea abies

text: Picea abies

text: Somatic germinants of Norway spruce NR10


text: Homo sapiens

characteristic: ArrayExpress-Species

text: SC

text: public

text: human

text: Homo sapiens

text: Homo sapiens


text: Mouse Cell Line

characteristic: ArrayExpress-Phenotype

text: Mus musculus

text: SC

text: public

text: house mouse

characteristic: common name

text: Mus musculus

text: Mus musculus


text: WASHINGTON UNIVERSITY CENTER FOR GENOME SCIENCES

text: public

characteristic: collection date

text: ENVO:mammalia-associated habitat

characteristic: environment (biome)

text: ENVO:mammalia-associated habitat

characteristic: environment (feature)

text: ENVO:feces

characteristic: environment (material)

text: Malawi

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: [Ruminococcus] gnavus

characteristic: project name

text: [Ruminococcus] gnavus

text: Illumina MiSeq

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ENVO:mammalia-associated habitat

text: ENVO:mammalia-associated habitat

text: ENVO:feces

text: Malawi

text: human-gut

text: metagenome

text: [Clostridium] symbiosum

characteristic: organism

text: [Clostridium] symbiosum

text: Illumina MiSeq

characteristic: title


text: Siberian State Medical University

characteristic: INSDC center name

characteristic: INSDC last update

text: public

tag: Namespace:Siberian State Medical University

characteristic: collection date

text: Human

characteristic: environment (biome)

text: bile

characteristic: environment (feature)

text: bile

characteristic: environment (material)

text: Russia

characteristic: geographic location (country and/or sea)

text: 56° 5'

text: 84° 967'

text: human-associated

characteristic: human associated environmental package

text: metagenome

text: metagenome

text: Biliary microbiota, gall bladder disease and infection with Opisthorchis felineus

text: metagenome

text: 16S rRNA sequencing

text: opi-


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Siberian State Medical University

text: public

text: Human

text: bile

text: bile

text: Russia

text: 56° 5'

characteristic: geographic location (latitude)

text: 84° 967'

characteristic: geographic location (longitude)

text: human-associated

text: metagenome

characteristic: investigation type

text: metagenome

characteristic: project name

text: metagenome

text: 16S rRNA sequencing

characteristic: sequencing method

text: opi+


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Siberian State Medical University

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Human

text: bile

text: bile

text: Russia

text: 56° 5'

text: 84° 967'

text: human-associated

text: metagenome

text: metagenome

characteristic: organism

text: metagenome

text: 16S rRNA sequencing

text: negative control


NC

text: Siberian State Medical University

characteristic: INSDC center name

characteristic: INSDC last update

text: public

text: NC

characteristic: collection date

text: Human

characteristic: environment (biome)

text: bile

characteristic: environment (feature)

text: bile

characteristic: environment (material)

text: Russia

text: 56° 5'

text: 84° 967'

text: human-associated

text: metagenome

text: metagenome

text: metagenome

text: 16S rRNA sequencing

text: negative control

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Siberian State Medical University

text: public

text: Human

text: bile

text: bile

text: Russia

characteristic: geographic location (country and/or sea)

text: 56° 5'

characteristic: geographic location (latitude)

text: 84° 967'

characteristic: geographic location (longitude)

text: human-associated

characteristic: human associated environmental package

text: metagenome

characteristic: investigation type

text: metagenome

text: metagenome

text: 16S rRNA sequencing

text: DNA extraction control


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: BANGOR UNIVERSITY

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:BANGOR UNIVERSITY

text: temperate woodland

text: anthropogenic geographic feature

text: organic material

text: United Kingdom

text: metagenome

text: metagenome

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

text: metagenome

text: illumina

characteristic: sequencing method


text: INRA-CMSE

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: Submitter Id

characteristic: collection date

text: Delia radicum pupae were sampled in broccoli fields in Brittany (Western France) between April and June 2009 from three distinct areas spanning approximately 200km, which are representative of brassicaceous production: 'Finistere' (westernmost tip of Brittany), 'Cotes d'Armor' (central Brittany) and 'Ille et Vilaine' (easternmost Brittany). Pupae were stored individually in punctured Eppendorf tubes in controlled conditions (20degC, 60% RH and a 16-L: 8-D photoperiod) until emergence of adults. Individuals of the four species (D. radicum and its three parasitoids A. bilineata, A. bipustulata and T. rapae) emerging from the pupae were then collected and stored in 95% ethanol (A. bilineata) or reared in the laboratory between 6 and 18 months in the same controlled conditions as above and then stored in 95% ethanol (other species). In order to study most of the extensive microbiota that individuals of each species could harbor, we took individuals at the adult stage in laboratory populations. No specific permissions were required for these collection activities and samplings did not involve endangered or protected species.

characteristic: description

text: environmental system

characteristic: environment (biome)

text: organic feature

characteristic: environment (feature)

text: organic material

characteristic: environment (material)

text: France

text: Delia radicum

characteristic: host common name

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: GAGTA

characteristic: multiplex identifiers

characteristic: number of the replicate

text: insect metagenome

characteristic: organism

text: Fwd:5-GTGCCAGCMGCCGCGGTAATAC-3; Rev:3-CCGTCAATTCCTTTGAGTTT-5

characteristic: pcr primers

text: insect metagenome

text: 16S rDNA

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-CMSE

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Delia radicum pupae were sampled in broccoli fields in Brittany (Western France) between April and June 2009 from three distinct areas spanning approximately 200km, which are representative of brassicaceous production: 'Finistere' (westernmost tip of Brittany), 'Cotes d'Armor' (central Brittany) and 'Ille et Vilaine' (easternmost Brittany). For convenience, these populations will therefore be referred to as 'western', 'central' and 'eastern'. Pupae were stored individually in punctured Eppendorf tubes in controlled conditions (20degC, 60% RH and a 16-L: 8-D photoperiod) until emergence of adults. Individuals of the four species (D. radicum and its three parasitoids A. bilineata, A. bipustulata and T. rapae) emerging from the pupae were then collected and stored in 95% ethanol (A. bilineata) or reared in the laboratory between 6 and 18 months in the same controlled conditions as above and then stored in 95% ethanol (other species). In order to study most of the extensive microbiota that individuals of each species could harbor, we took individuals at the adult stage in laboratory populations. No specific permissions were required for these collection activities and samplings did not involve endangered or protected species.

text: environmental system

text: organic feature

text: organic material

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Delia radicum

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: TACTG

text: insect metagenome

characteristic: project name

text: insect metagenome

text: 16S rDNA

characteristic: title


text: INRA-CMSE

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: environmental system

characteristic: environment (biome)

text: organic feature

characteristic: environment (feature)

text: organic material

characteristic: environment (material)

text: France

text: Aleochara bilineata

characteristic: host common name

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: TCTCG

characteristic: multiplex identifiers

characteristic: number of the replicate

text: insect metagenome

text: insect metagenome

characteristic: sequencing method

text: 16S rDNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-CMSE

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: environmental system

text: organic feature

text: organic material

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Aleochara bilineata

text: host-associated

text: mimarks-survey

text: ATCAGACACG

text: insect metagenome

characteristic: organism

characteristic: pcr primers

text: insect metagenome

text: 16S rDNA

characteristic: target gene


text: INRA-CMSE

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: environmental system

characteristic: environment (biome)

text: organic feature

characteristic: environment (feature)

text: organic material

characteristic: environment (material)

text: France

text: Aleochara bipustulata

characteristic: host common name

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: TGTAC

text: insect metagenome

characteristic: project name

text: insect metagenome

text: 16S rDNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-CMSE

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: environmental system

text: organic feature

text: organic material

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Aleochara bipustulata

text: host-associated

text: mimarks-survey

text: ATATCGCGAG

characteristic: multiplex identifiers

characteristic: number of the replicate

text: insect metagenome

text: insect metagenome

characteristic: sequencing method

text: 16S rDNA


text: INRA-CMSE

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: environmental system

characteristic: environment (biome)

text: organic feature

characteristic: environment (feature)

text: organic material

characteristic: environment (material)

text: France

text: Trybliographa rapae

characteristic: host common name

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: GACGT

text: insect metagenome

characteristic: organism

characteristic: pcr primers

text: insect metagenome

text: 16S rDNA

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-CMSE

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: environmental system

text: organic feature

text: organic material

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Trybliographa rapae

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: ACGCTCGACA

text: insect metagenome

characteristic: project name

text: insect metagenome

text: 16S rDNA

characteristic: title


text: INRA-CMSE

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: environmental system

characteristic: environment (biome)

text: organic feature

characteristic: environment (feature)

text: organic material

characteristic: environment (material)

text: France

text: Delia radicum

characteristic: host common name

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: GAGTA

characteristic: multiplex identifiers

characteristic: number of the replicate

text: insect metagenome

text: insect metagenome

characteristic: sequencing method

text: 16S rDNA


text: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

characteristic: ArrayExpress-Species

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: common name

characteristic: organism


text: CAM

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Wild-caught male. El Topo, Ecuador

characteristic: description

text: Heliconius clysonymus

text: Heliconius clysonymus

text: Heliconius clysonymus CAM009211

characteristic: title