text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: GAZ:USA

characteristic: country

characteristic: description

text: TRUE

text: 0.4 MD 0

characteristic: elevation

text: coniferous forest biome

characteristic: env biome

text: rhizosphere

characteristic: env feature

text: soil

characteristic: env matter

text: soil

characteristic: env package

text: rhizosphere

text: USA:CO

text: TRUE

text: rhizome

characteristic: host common name

text: rhizosphere metagenome

text: CSU

text: FALSE

text: TRUE

characteristic: public

text: completed

text: rhizome

characteristic: sample type

text: rhizosphere metagenome

text: 15.63 MD 0.12

text: 2.33 MD 0.03b

text: 1.63 MD 0.09

text: 1.67 MD 0.03

text: 324.30 MD 2.3

text: 2.03 MD 0.07

text: 0.16 MD 0.01

text: 0.11 MD 0.05

text: 4.60 MD 0.12

text: 39.73 MD 0.12

text: 394 MD 1.53

text: 149 MD 1.97

text: 4.57 MD 0.09

text: 0.01 MD 0

text: 13.97 MD 0.12

text: 0.42 MD 0.02

text: 1.23 MD 0.03

text: 8.1 MD 0.06

text: 1.23 MD 0.09

text: 0.15 MD 0

text: 4.5 MD 0.06


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: GAZ:USA

characteristic: depth

text: Astragalus bisulcatus HA, Pine Ridge (seleniferous)

text: TRUE

text: 0.4 MD 0

text: coniferous forest biome

text: rhizosphere

text: soil

text: soil

text: rhizosphere

text: USA:CO

characteristic: geo loc name

text: TRUE

text: rhizome

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: rhizosphere metagenome

characteristic: organism

text: CSU

text: FALSE

text: TRUE

text: completed

text: rhizome

text: rhizosphere metagenome

text: 15.63 MD 0.12

text: 2.33 MD 0.03b

text: 1.63 MD 0.09

text: 1.67 MD 0.03

text: 324.30 MD 2.3

text: 2.03 MD 0.07

text: 0.16 MD 0.01

text: 0.11 MD 0.05

text: 4.60 MD 0.12

text: 39.73 MD 0.12

text: 394 MD 1.53

text: 149 MD 1.97

text: 4.57 MD 0.09

text: 0.01 MD 0

text: 13.97 MD 0.12

text: 0.42 MD 0.02

text: 1.23 MD 0.03

text: 8.1 MD 0.06

text: 1.23 MD 0.09

text: 0.15 MD 0

text: 4.5 MD 0.06

characteristic: time of collection

text: Investigating the rhizosphere microbiome as influenced by soil selenium, plant species, plant selenium accumulation and geographic proximity

characteristic: title

type: has member


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: GAZ:USA

characteristic: country

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: sterile water

characteristic: env matter

text: misc environment

characteristic: env package

text: sterile water

text: USA:CA:San Diego

text: TRUE

text: control blank

characteristic: host common name

text: metagenome

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: completed

text: control blank

characteristic: sample type

text: metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: GAZ:USA

characteristic: depth

text: TRUE

text: urban biome

text: research facility

text: sterile water

text: misc environment

text: sterile water

text: USA:CA:San Diego

characteristic: geo loc name

text: TRUE

text: control blank

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

text: completed

text: control blank

text: metagenome


HS1 input strain1

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: HS1 input strain1

tag: Namespace:GHENT UNIVERSITY

text: Complete and closed genome of HS1 input strain

characteristic: description

text: HS1 input strain

characteristic: isolate

text: Helicobacter suis HS1

text: Helicobacter suis HS1

text: HS1 input strain

characteristic: strain

text: HS1 input strain

characteristic: title


HS1 output strain 1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

text: public

characteristic: SRA accession

text: HS1 output strain 1

characteristic: Submitter Id

text: Complete and closed genome of HS1 output strain 1

text: Helicobacter suis HS1

text: Helicobacter suis HS1

text: HS1 output strain 1


HS1 output strain 2

text: GHENT UNIVERSITY

text: public

text: HS1 output strain 2

text: Complete and closed genome of HS1 output strain 2

text: Helicobacter suis HS1

text: Helicobacter suis HS1

text: HS1 output strain 2


HS1 output strain 3

text: GHENT UNIVERSITY

text: public

text: HS1 output strain 3

text: Complete and closed genome of HS1 output strain 3

text: Helicobacter suis HS1

text: Helicobacter suis HS1

text: HS1 output strain 3


HS1 output strain 4

text: GHENT UNIVERSITY

text: public

text: HS1 output strain 4

text: Complete and closed genome of HS1 output strain 4

text: Helicobacter suis HS1

text: Helicobacter suis HS1

text: HS1 output strain 4


text: Plasmodium falciparum

characteristic: ArrayExpress-Species

text: SC

text: public

text: malaria parasite P. falciparum

characteristic: common name

text: Plasmodium falciparum

text: Plasmodium falciparum


text: Larval:Day 5 - ZFS:0000037

characteristic: ArrayExpress-DevelopmentalStage

text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: Sanger AB T?bingen

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: zebrafish

text: Danio rerio

characteristic: organism

text: Total RNA from a single zebrafish embryo from the SAT Sanger AB T?bingen) strain collected at 5dpf plus ERCC spike mix 1 (Ambion).

characteristic: sample description

text: Danio rerio

text: Sanger AB T?bingen


text: male

characteristic: ArrayExpress-Sex

text: Homo sapiens

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: human

text: Homo sapiens

text: Homo sapiens


E-MTAB-5122:DNA only

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: University of Leeds

text: public

text: E-MTAB-5122:DNA only

tag: Namespace:University of Leeds

text: ArrayExpress

characteristic: broker name

text: Protocols: Streptomyces albus S4 strains were grown in Lennox Broth (Kieser et al. Practical Streptomyces Genetics. The John Innes Foundation. Norwich, United Kingdom) whilst shaking for 48 hours at 28 degrees Celsisus. The same as P-MTAB-39829 exception that an an Active Motif EpiShear sonicatior (30% amplitude, 30s on, 30s off for a total time of 13 minutes) was used to shear DNA. DNA libraries were made using the NEBNext Ultra DNA Library Prep Method. In brief, samples were initially quantified using High Sensitivity dsDNA Qubit assay (Thermo Q32854). Ten nanograms of each DNA sample was then sheared via sonication on the Covaris S2 system to an average size of ~200 bp. This was confirmed by checking samples on Agilent High Sensitivity D1000 Screentape. Samples were then end repaired by addition of a single A nucleotide added to the 3’ end of the DNA fragments and (10-fold diluted) adaptors ligated according to NEB’s instructions. Due to the small amount of starting material, no size selection was performed, yet the adaptor ligated fragments were bead purified according to NEB’s instructions, substituting Ampure XP beads for AxyPrep PCR clean up beads (Axygen). The purified adaptor ligated DNA fragments were then PCR amplified according to NEB’s instructions, incorporating a different 3’ 6 bp index sequence into each sample, which would allow post-sequencing demultiplexing. The PCR products were then bead purified according to NEB’s instructions, substituting Ampure XP beads for AxyPrep PCR clean up beads (Axygen). The final libraries were assessed on Agilent High Sensitivity D1000 Screentape as above, before being quantified by picogreen (Thermo Q33130). One hundred nanograms of each DNA library was then added to a pool for subsequent sequencing.

characteristic: description

text: wild type genotype

characteristic: genotype

text: Streptomyces albus

text: Streptomyces albus

text: Streptomyces albus

text: Streptomyces albus S4

characteristic: strain

text: DNA only

characteristic: title


E-MTAB-5122:WT anti-FLAG rep1

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Leeds

text: public

characteristic: SRA accession

text: E-MTAB-5122:WT anti-FLAG rep1

characteristic: Submitter Id

text: ArrayExpress

text: wild type genotype

text: Streptomyces albus

text: Streptomyces albus

text: Streptomyces albus

text: Streptomyces albus S4

text: WT anti-FLAG rep1


E-MTAB-5122:WT anti-FLAG rep2

text: University of Leeds

text: public

text: E-MTAB-5122:WT anti-FLAG rep2

text: ArrayExpress

text: wild type genotype

text: Streptomyces albus

characteristic: organism

text: Streptomyces albus

text: Streptomyces albus

text: Streptomyces albus S4

text: WT anti-FLAG rep2


E-MTAB-5122:fscRI/3xFLAG-fscRI rep1

text: University of Leeds

text: public

text: E-MTAB-5122:fscRI/3xFLAG-fscRI rep1

text: ArrayExpress

text: fscRI deletion

text: Streptomyces albus

text: Streptomyces albus

text: fscRI deletion and FLAG tagging

characteristic: phenotype

text: Streptomyces albus

text: Streptomyces albus S4

text: fscRI/3xFLAG-fscRI rep1


E-MTAB-5122:fscRI/3xFLAG-fscRI rep2

text: University of Leeds

characteristic: INSDC center name

text: public

text: E-MTAB-5122:fscRI/3xFLAG-fscRI rep2

text: ArrayExpress

text: fscRI deletion

text: Streptomyces albus

text: Streptomyces albus

text: fscRI deletion and FLAG tagging

text: Streptomyces albus

text: Streptomyces albus S4

text: fscRI/3xFLAG-fscRI rep2


E-MTAB-5123:Sample 1

characteristic: INSDC first public

text: public

text: E-MTAB-5123:Sample 1

tag: Namespace:Division of Liver Diseases, Icahn School of Medicine at Mount Sinai

text: ArrayExpress

text: human

characteristic: common name

text: Protocols: Circulating DNA was isolated from 5 mL and 1 mL of plasma and serum, respectively, using the QIAamp Circulating Nucleic Acid Kit (Qiagen). Germline DNA was isolated from PBMC using the QIAamp DNA Mini Kit (Qiagen). DNeasy Blood & Tissue kit (Qiagen) was used to extract DNA from fresh frozen tissue, following the recommendations from the manufacturer. Extracted DNA was immediately aliquoted and stored at -20°C. The purified plasma DNA was run on bioanalyzer for size estimation and its concentration was estimated by fluorometric quantitation using Qubit (ThermoFisher). Indexed Illumina NGS libraries were prepared from plasma DNA, tumor tissue and PBMC (germline DNA). Sequence captures of 58-gene-exons from plasma DNA, tumor DNA and germline DNA libraries were carried out using the Biotinylated custom baits of Agilent SureSelect oligo pool (Agilent Cat # 5190-4808)

text: hepatocellular carcinoma

characteristic: disease

text: tumor DNA

characteristic: fraction

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: liver

characteristic: organism part

text: Homo sapiens

text: Sample 1


E-MTAB-5123:Sample 10

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Division of Liver Diseases, Icahn School of Medicine at Mount Sinai

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5123:Sample 10

text: ArrayExpress

characteristic: broker name

text: human

characteristic: description

text: hepatocellular carcinoma

text: tumor DNA

text: Homo sapiens

text: Homo sapiens

text: liver

text: Homo sapiens

text: Sample 10


E-MTAB-5123:Sample 11

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

text: E-MTAB-5123:Sample 11

text: ArrayExpress

text: human

text: hepatocellular carcinoma

text: tumor DNA

text: Homo sapiens

text: Homo sapiens

text: liver

text: Homo sapiens

text: Sample 11

characteristic: title


E-MTAB-5123:Sample 12

characteristic: INSDC center name

text: public

text: E-MTAB-5123:Sample 12

characteristic: Submitter Id

text: ArrayExpress

text: human

text: hepatocellular carcinoma

text: tumor DNA

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: liver

text: Homo sapiens

text: Sample 12


E-MTAB-5123:Sample 13

characteristic: INSDC first public

text: public

text: E-MTAB-5123:Sample 13

text: ArrayExpress

text: human

characteristic: common name

text: hepatocellular carcinoma

characteristic: disease

text: tumor DNA

text: Homo sapiens

text: Homo sapiens

text: liver

text: Homo sapiens

text: Sample 13


E-MTAB-5123:Sample 14

text: public

text: E-MTAB-5123:Sample 14

text: ArrayExpress

text: human

text: hepatocellular carcinoma

text: tumor DNA

characteristic: fraction

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: liver

characteristic: organism part

text: Homo sapiens

text: Sample 14


E-MTAB-5123:Sample 15

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

text: E-MTAB-5123:Sample 15

text: ArrayExpress

text: human

text: hepatocellular carcinoma

text: tumor DNA

text: Homo sapiens

text: Homo sapiens

text: liver

text: Homo sapiens

text: Sample 15


E-MTAB-5123:Sample 16

text: public

characteristic: INSDC status

text: E-MTAB-5123:Sample 16

text: ArrayExpress

characteristic: broker name

text: human

characteristic: description

text: hepatocellular carcinoma

text: tumor DNA

text: Homo sapiens

text: Homo sapiens

text: liver

text: Homo sapiens

text: Sample 16


E-MTAB-5123:Sample 17

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

text: E-MTAB-5123:Sample 17

text: ArrayExpress

text: human

text: hepatocellular carcinoma

text: tumor DNA

text: Homo sapiens

text: Homo sapiens

text: liver

text: Homo sapiens

text: Sample 17


E-MTAB-5123:Sample 18

characteristic: INSDC center name

text: public

text: E-MTAB-5123:Sample 18

characteristic: Submitter Id

text: ArrayExpress

text: human

text: hepatocellular carcinoma

text: tumor DNA

text: Homo sapiens

text: Homo sapiens

text: liver

text: Homo sapiens

text: Sample 18

characteristic: title


E-MTAB-5123:Sample 19

characteristic: INSDC first public

text: public

text: E-MTAB-5123:Sample 19

text: ArrayExpress

text: human

characteristic: common name

text: hepatocellular carcinoma

text: tumor DNA

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: liver

text: Homo sapiens

text: Sample 19


E-MTAB-5123:Sample 2

text: public

text: E-MTAB-5123:Sample 2

text: ArrayExpress

text: human

text: hepatocellular carcinoma

characteristic: disease

text: tumor DNA

characteristic: fraction

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: liver

text: Homo sapiens

text: Sample 2


E-MTAB-5123:Sample 20

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-5123:Sample 20

text: ArrayExpress

text: human

text: hepatocellular carcinoma

text: tumor DNA

text: Homo sapiens

text: Homo sapiens

text: liver

characteristic: organism part

text: Homo sapiens

text: Sample 20


E-MTAB-5123:Sample 21

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5123:Sample 21

text: ArrayExpress

characteristic: broker name

text: human

text: hepatocellular carcinoma

text: tumor DNA

text: Homo sapiens

text: Homo sapiens

text: liver

text: Homo sapiens

text: Sample 21


E-MTAB-5123:Sample 22

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-5123:Sample 22

text: ArrayExpress

text: human

characteristic: description

text: hepatocellular carcinoma

text: tumor DNA

text: Homo sapiens

text: Homo sapiens

text: liver

text: Homo sapiens

text: Sample 22


E-MTAB-5123:Sample 23

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-5123:Sample 23

characteristic: Submitter Id

text: ArrayExpress

text: human

text: hepatocellular carcinoma

text: tumor DNA

text: Homo sapiens

text: Homo sapiens

text: liver

text: Homo sapiens

text: Sample 23


E-MTAB-5123:Sample 24

characteristic: INSDC first public

text: public

text: E-MTAB-5123:Sample 24

text: ArrayExpress

text: human

characteristic: common name

text: hepatocellular carcinoma

text: tumor DNA

text: Homo sapiens

text: Homo sapiens

text: liver

text: Homo sapiens

text: Sample 24

characteristic: title


E-MTAB-5123:Sample 25

text: public

text: E-MTAB-5123:Sample 25

text: ArrayExpress

text: human

text: hepatocellular carcinoma

characteristic: disease

text: germline DNA

characteristic: fraction

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Peripheral blood mononuclear cell

text: Homo sapiens

text: Sample 25


E-MTAB-5123:Sample 26

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-5123:Sample 26

text: ArrayExpress

text: human

text: hepatocellular carcinoma

text: germline DNA

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: Peripheral blood mononuclear cell

text: Homo sapiens

text: Sample 26


E-MTAB-5123:Sample 27

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5123:Sample 27

text: ArrayExpress

text: human

text: hepatocellular carcinoma

text: germline DNA

text: Homo sapiens

text: Homo sapiens

text: Peripheral blood mononuclear cell

characteristic: organism part

text: Homo sapiens

text: Sample 27


E-MTAB-5123:Sample 28

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-5123:Sample 28

text: ArrayExpress

characteristic: broker name

text: human

text: hepatocellular carcinoma

text: germline DNA

text: Homo sapiens

text: Homo sapiens

text: Peripheral blood mononuclear cell

text: Homo sapiens

text: Sample 28


E-MTAB-5123:Sample 29

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-5123:Sample 29

text: ArrayExpress

text: human

characteristic: description

text: hepatocellular carcinoma

text: germline DNA

text: Homo sapiens

text: Homo sapiens

text: Peripheral blood mononuclear cell

text: Homo sapiens

text: Sample 29


E-MTAB-5123:Sample 3

characteristic: INSDC first public

text: public

text: E-MTAB-5123:Sample 3

characteristic: Submitter Id

text: ArrayExpress

text: human

characteristic: common name

text: hepatocellular carcinoma

text: tumor DNA

text: Homo sapiens

text: Homo sapiens

text: liver

text: Homo sapiens

text: Sample 3


E-MTAB-5123:Sample 30

text: public

text: E-MTAB-5123:Sample 30

text: ArrayExpress

text: human

text: hepatocellular carcinoma

characteristic: disease

text: germline DNA

characteristic: fraction

text: Homo sapiens

text: Homo sapiens

text: Peripheral blood mononuclear cell

text: Homo sapiens

text: Sample 30

characteristic: title


E-MTAB-5123:Sample 31

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-5123:Sample 31

text: ArrayExpress

text: human

text: hepatocellular carcinoma

text: germline DNA

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Peripheral blood mononuclear cell

text: Homo sapiens

text: Sample 31


E-MTAB-5123:Sample 32

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5123:Sample 32

text: ArrayExpress

text: human

text: hepatocellular carcinoma

text: germline DNA

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: Peripheral blood mononuclear cell

text: Homo sapiens

text: Sample 32


E-MTAB-5123:Sample 33

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-5123:Sample 33

text: ArrayExpress

text: human

text: hepatocellular carcinoma

text: circulating free DNA

text: Homo sapiens

text: Homo sapiens

text: plasma and serum

characteristic: organism part

text: Homo sapiens

text: Sample 33


E-MTAB-5123:Sample 34

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-5123:Sample 34

text: ArrayExpress

characteristic: broker name

text: human

text: hepatocellular carcinoma

text: circulating free DNA

text: Homo sapiens

text: Homo sapiens

text: plasma and serum

text: Homo sapiens

text: Sample 34


E-MTAB-5123:Sample 35

characteristic: INSDC first public

text: public

text: E-MTAB-5123:Sample 35

characteristic: Submitter Id

text: ArrayExpress

text: human

characteristic: description

text: hepatocellular carcinoma

text: circulating free DNA

text: Homo sapiens

text: Homo sapiens

text: plasma and serum

text: Homo sapiens

text: Sample 35


E-MTAB-5123:Sample 36

text: public

text: E-MTAB-5123:Sample 36

text: ArrayExpress

text: human

characteristic: common name

text: hepatocellular carcinoma

characteristic: disease

text: circulating free DNA

characteristic: fraction

text: Homo sapiens

text: Homo sapiens

text: plasma and serum

text: Homo sapiens

text: Sample 36


E-MTAB-5123:Sample 37

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-5123:Sample 37

text: ArrayExpress

text: human

text: hepatocellular carcinoma

text: circulating free DNA

text: Homo sapiens

text: Homo sapiens

text: plasma and serum

text: Homo sapiens

text: Sample 37

characteristic: title


E-MTAB-5123:Sample 38

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5123:Sample 38

text: ArrayExpress

text: human

text: hepatocellular carcinoma

text: circulating free DNA

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: plasma and serum

text: Homo sapiens

text: Sample 38


E-MTAB-5123:Sample 39

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-5123:Sample 39

text: ArrayExpress

text: human

text: hepatocellular carcinoma

text: circulating free DNA

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: plasma and serum

text: Homo sapiens

text: Sample 39


E-MTAB-5123:Sample 4

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-5123:Sample 4

text: ArrayExpress

text: human

text: hepatocellular carcinoma

text: tumor DNA

text: Homo sapiens

text: Homo sapiens

text: liver

characteristic: organism part

text: Homo sapiens

text: Sample 4


E-MTAB-5123:Sample 40

characteristic: INSDC first public

text: public

text: E-MTAB-5123:Sample 40

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: human

text: hepatocellular carcinoma

text: circulating free DNA

text: Homo sapiens

text: Homo sapiens

text: plasma and serum

text: Homo sapiens

text: Sample 40


E-MTAB-5123:Sample 5

text: public

text: E-MTAB-5123:Sample 5

text: ArrayExpress

text: human

characteristic: common name

characteristic: description

text: hepatocellular carcinoma

characteristic: disease

text: tumor DNA

text: Homo sapiens

text: Homo sapiens

text: liver

text: Homo sapiens

text: Sample 5


E-MTAB-5123:Sample 6

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-5123:Sample 6

text: ArrayExpress

text: human

text: hepatocellular carcinoma

text: tumor DNA

characteristic: fraction

text: Homo sapiens

text: Homo sapiens

text: liver

text: Homo sapiens

text: Sample 6


E-MTAB-5123:Sample 7

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5123:Sample 7

text: ArrayExpress

text: human

text: hepatocellular carcinoma

text: tumor DNA

text: Homo sapiens

text: Homo sapiens

text: liver

text: Homo sapiens

text: Sample 7

characteristic: title


E-MTAB-5123:Sample 8

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-5123:Sample 8

text: ArrayExpress

text: human

text: hepatocellular carcinoma

text: tumor DNA

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: liver

text: Homo sapiens

text: Sample 8


E-MTAB-5123:Sample 9

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-5123:Sample 9

text: ArrayExpress

text: human

text: hepatocellular carcinoma

text: tumor DNA

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: liver

text: Homo sapiens

text: Sample 9


text: Mus musculus

characteristic: ArrayExpress-Species

text: SC

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: house mouse

text: Mus musculus

text: Mus musculus


text: AALBORG UNIVERSITY

text: public

tag: Namespace:AALBORG UNIVERSITY

text: complex sample

characteristic: common name

characteristic: description

text: metagenome

text: metagenome

text: complex sample


J.0081 cp genome

characteristic: ENA-CHECKLIST

text: public

text: J.0081 cp genome

tag: Namespace:School of BioSciences, The University of Melbourne

text: Scinaia undulata J.0081 cp genome

text: Scinaia undulata

text: Scinaia undulata

characteristic: specimen voucher

text: J.0081 cp genome


J.0604 cp genome partial

characteristic: ENA-FIRST-PUBLIC

text: School of BioSciences, The University of Melbourne

text: public

text: J.0604 cp genome partial

text: Titanophycus setcehlii J.0604 cp genome partial

text: Titanophycus setchellii

text: Titanophycus setchellii

text: J.0604 cp genome partial


H.1444 cp genome

characteristic: INSDC last update

text: public

text: H.1444 cp genome

text: Nemalion sp. H.1444 cp genome

text: Nemalion sp. JFC-2016

text: Nemalion sp. JFC-2016

text: H.1444 cp genome


ODC1024 cp genome

text: public

characteristic: INSDC status

text: ODC1024 cp genome

text: Palmaria palmata ODC1024 cp genome

text: Palmaria palmata

text: Palmaria palmata

text: ODC1024 cp genome


HEC15602 cp genome partial

text: public

text: HEC15602 cp genome partial

text: Rhodothamniella floridula HEC15602 cp genome partial

text: Rhodothamniella floridula

text: Rhodothamniella floridula

text: HEC15602 cp genome partial

characteristic: title


characteristic: ENA-LAST-UPDATE

text: URMITE

text: public

text: Bacillus sp. Marseille-P2600

text: Bacillus sp. Marseille-P2600

characteristic: strain

text: Bacillus massilioglaciei genome


J.0145 cp genome partial

characteristic: External Id

text: public

text: J.0145 cp genome partial

text: Tricleocarpa cylindrica J.0145 cp genome partial

text: Tricleocarpa cylindrica

characteristic: organism

text: Tricleocarpa cylindrica

text: J.0145 cp genome partial


text: IOA

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: salmon louse

text: Lepeophtheirus salmonis

text: Lepeophtheirus salmonis

text: Lepeophtheirus salmonis strain IoA-00


text: public

tag: Namespace:Helmholtz Centre for Environmental Research

text: Partially ammonia-inhibited biogas reactor fed with maize silage and chicken manure

text: uncultured bacterium

text: uncultured bacterium

text: R4.22 _ co-digestion


text: Helmholtz Centre for Environmental Research

text: public

text: Biogas reactor fed only with maize silage at initial phase of the experiment before the co-digestion with chicken manure

text: uncultured bacterium

text: uncultured bacterium

text: R4.22 _ mono-digestion


text: public

text: Completely ammonia-inhibited biogas reactor fed with maize silage and chicken manure

text: uncultured bacterium

text: uncultured bacterium

text: R4.23 _ co-digestion


text: public

text: uncultured bacterium

text: uncultured bacterium

text: R4.23 _ mono-digestion


text: public

text: Control biogas reactor fed only with maize silage at initial phase of the experiment before ammonia inhibition in reactors R4.22 & R4.23

text: uncultured bacterium

text: uncultured bacterium

text: R4.24 _ mono-digestion


text: public

text: Control biogas reactor fed only with maize silage at final phase of the experiment during ammonia inhibition in reactors R4.22 & R4.23

text: uncultured bacterium

text: uncultured bacterium

text: R4.25 _ mono-digestion


text: public

text: uncultured bacterium

text: uncultured bacterium

text: R4.25 _ mono-digestion


text: UCSDMI

text: public

text: qiita_sid_1883:1883.2000.001.Crump.Artic.LTREB.main.lane1.NoIndex

characteristic: anonymized name

text: Missing: Not provided

characteristic: calcium

text: uM

characteristic: chla

text: ugL

text: Missing: Not provided

characteristic: chloride

text: Missing: Not provided

characteristic: depth

text: lake water

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: TRUE

characteristic: elevation

text: small lake biome

characteristic: env biome

text: freshwater habitat

characteristic: env feature

text: water

characteristic: env package

text: fresh water

text: TRUE

characteristic: extracted DNA avail now

text: USA:AK

characteristic: geo loc name

text: TRUE

text: TRUE

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: Missing: Not provided

characteristic: magnesium

text: Missing: Not provided

text: Missing: Not provided

characteristic: nitrate

text: freshwater metagenome

text: Missing: Not provided

characteristic: oxygen

text: mgL

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

characteristic: ph

text: Missing: Not provided

characteristic: ph method

text: Missing: Not provided

characteristic: phosphate

text: Cambridge, MD

text: TRUE

text: Missing: Not provided

characteristic: potassium

text: TRUE

characteristic: public

text: completed

text: Missing: Not provided

characteristic: salinity

text: psu

characteristic: salinity unit

text: water collected on 0.22 m sterivex filter

text: fresh water

characteristic: sample type

text: sequenced (16S)

text: freshwater metagenome

text: Missing: Not provided

characteristic: silica

text: Missing: Not provided

characteristic: sodium

text: Missing: Not provided

characteristic: sulfate

text: Missing: Not provided

characteristic: temp

text: Missing: Not reported

text: Missing: Not reported


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_1883:1883.2000.002.Crump.Artic.LTREB.main.lane1.NoIndex

characteristic: Submitter Id

characteristic: anonymized name

text: Missing: Not provided

characteristic: calcium

text: uM

text: Missing: Not provided

characteristic: chla

text: ugL

text: Missing: Not provided

characteristic: chloride

characteristic: depth

text: lake water

characteristic: description

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: TRUE

characteristic: elevation

text: small lake biome

characteristic: env biome

text: freshwater habitat

characteristic: env feature

text: water

characteristic: env package

text: fresh water

text: TRUE

characteristic: extracted DNA avail now

text: USA:AK

characteristic: geo loc name

text: TRUE

text: TRUE

characteristic: host subject id

characteristic: latitude

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: freshwater metagenome

characteristic: organism

text: mgL

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: Cambridge, MD

text: TRUE

text: Missing: Not provided

text: TRUE

text: completed

text: Missing: Not provided

text: psu

text: fresh water

text: sequenced (16S)

text: freshwater metagenome

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

characteristic: title

text: Missing: Not reported

text: Missing: Not reported


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_1883:1883.2000.003.Crump.Artic.LTREB.main.lane1.NoIndex

characteristic: Submitter Id

text: Missing: Not provided

text: uM

text: Missing: Not provided

text: ugL

text: Missing: Not provided

text: Missing: Not reported

text: stream water

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: TRUE

text: freshwater biome

text: freshwater habitat

text: water

text: fresh water

text: TRUE

text: USA:AK

text: TRUE

text: TRUE

characteristic: longitude

text: Missing: Not provided

characteristic: magnesium

text: Missing: Not provided

text: Missing: Not provided

characteristic: nitrate

text: freshwater metagenome

text: Missing: Not provided

characteristic: oxygen

text: mgL

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

characteristic: ph

text: Missing: Not provided

characteristic: ph method

text: Missing: Not provided

characteristic: phosphate

text: Cambridge, MD

text: TRUE

text: Missing: Not provided

characteristic: potassium

text: TRUE

characteristic: public

text: completed

text: Missing: Not provided

characteristic: salinity

text: psu

characteristic: salinity unit

text: fresh water

characteristic: sample type

text: sequenced (16S)

text: freshwater metagenome

text: Missing: Not provided

characteristic: silica

text: Missing: Not provided

characteristic: sodium

text: Missing: Not provided

characteristic: sulfate

text: Missing: Not provided

characteristic: temp

text: Missing: Not reported

text: Missing: Not reported


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_1883:1883.2000.004.Crump.Artic.LTREB.main.lane1.NoIndex

characteristic: Submitter Id

characteristic: anonymized name

text: Missing: Not provided

characteristic: calcium

text: uM

characteristic: chla

text: ugL

text: Missing: Not provided

characteristic: chloride

characteristic: depth

text: lake water

characteristic: description

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: TRUE

characteristic: elevation

text: small lake biome

characteristic: env biome

text: freshwater habitat

characteristic: env feature

text: water

characteristic: env package

text: fresh water

text: TRUE

characteristic: extracted DNA avail now

text: USA:AK

characteristic: geo loc name

text: TRUE

text: TRUE

characteristic: host subject id

characteristic: latitude

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: freshwater metagenome

characteristic: organism

text: mgL

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: Cambridge, MD

text: TRUE

text: Missing: Not provided

text: TRUE

text: completed

text: Missing: Not provided

text: psu

text: fresh water

text: sequenced (16S)

text: freshwater metagenome

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

characteristic: title

text: Missing: Not reported

text: Missing: Not reported


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_1883:1883.2000.005.Crump.Artic.LTREB.main.lane1.NoIndex

characteristic: Submitter Id

text: Missing: Not provided

text: uM

text: ugL

text: Missing: Not provided

text: lake water

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: TRUE

text: small lake biome

text: freshwater habitat

text: water

text: fresh water

text: TRUE

text: USA:AK

text: TRUE

text: TRUE

characteristic: longitude

text: Missing: Not provided

characteristic: magnesium

text: Missing: Not provided

text: Missing: Not provided

characteristic: nitrate

text: freshwater metagenome

characteristic: oxygen

text: mgL

text: Missing: Not provided

text: Missing: Not provided

characteristic: ph

text: Missing: Not provided

characteristic: ph method

text: Missing: Not provided

characteristic: phosphate

text: Cambridge, MD

text: TRUE

text: Missing: Not provided

characteristic: potassium

text: TRUE

characteristic: public

text: completed

text: Missing: Not provided

characteristic: salinity

text: psu

characteristic: salinity unit

text: fresh water

characteristic: sample type

text: sequenced (16S)

text: freshwater metagenome

text: Missing: Not provided

characteristic: silica

text: Missing: Not provided

characteristic: sodium

text: Missing: Not provided

characteristic: sulfate

characteristic: temp

text: Missing: Not reported

text: Missing: Not reported


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_1883:1883.2000.006.Crump.Artic.LTREB.main.lane1.NoIndex

characteristic: Submitter Id

characteristic: anonymized name

text: Missing: Not provided

characteristic: calcium

text: uM

text: Missing: Not provided

characteristic: chla

text: ugL

text: Missing: Not provided

characteristic: chloride

text: Missing: Not reported

characteristic: depth

text: lake water

characteristic: description

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: TRUE

characteristic: elevation

text: small lake biome

characteristic: env biome

text: freshwater habitat

characteristic: env feature

text: water

characteristic: env package

text: fresh water

text: TRUE

characteristic: extracted DNA avail now

text: USA:AK

characteristic: geo loc name

text: TRUE

text: TRUE

characteristic: host subject id

characteristic: latitude

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: freshwater metagenome

characteristic: organism

text: Missing: Not provided

text: mgL

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: Cambridge, MD

text: TRUE

text: Missing: Not provided

text: TRUE

text: completed

text: Missing: Not provided

text: psu

text: fresh water

text: sequenced (16S)

text: freshwater metagenome

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

characteristic: title

text: Missing: Not reported

text: Missing: Not reported


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_1883:1883.2000.007.Crump.Artic.LTREB.main.lane1.NoIndex

characteristic: Submitter Id

text: Missing: Not provided

text: uM

text: Missing: Not provided

text: ugL

text: Missing: Not provided

text: Missing: Not reported

text: stream water

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: TRUE

text: freshwater biome

text: freshwater habitat

text: water

text: fresh water

text: TRUE

text: USA:AK

text: TRUE

text: TRUE

characteristic: longitude

text: Missing: Not provided

characteristic: magnesium

text: Missing: Not provided

text: Missing: Not provided

characteristic: nitrate

text: freshwater metagenome

text: Missing: Not provided

characteristic: oxygen

text: mgL

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

characteristic: ph

text: Missing: Not provided

characteristic: ph method

text: Missing: Not provided

characteristic: phosphate

text: Cambridge, MD

text: TRUE

text: Missing: Not provided

characteristic: potassium

text: TRUE

characteristic: public

text: completed

text: Missing: Not provided

characteristic: salinity

text: psu

characteristic: salinity unit

text: fresh water

characteristic: sample type

text: sequenced (16S)

text: freshwater metagenome

text: Missing: Not provided

characteristic: silica

text: Missing: Not provided

characteristic: sodium

text: Missing: Not provided

characteristic: sulfate

text: Missing: Not provided

characteristic: temp

text: Missing: Not reported

text: Missing: Not reported


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_1883:1883.2000.012.Crump.Artic.LTREB.main.lane1.NoIndex

characteristic: Submitter Id

characteristic: anonymized name

text: Missing: Not provided

characteristic: calcium

text: uM

text: Missing: Not provided

characteristic: chla

text: ugL

text: Missing: Not provided

characteristic: chloride

text: Missing: Not reported

characteristic: depth

text: lake water

characteristic: description

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: TRUE

characteristic: elevation

text: small lake biome

characteristic: env biome

text: freshwater habitat

characteristic: env feature

text: water

characteristic: env package

text: fresh water

text: TRUE

characteristic: extracted DNA avail now

text: USA:AK

characteristic: geo loc name

text: TRUE

text: TRUE

characteristic: host subject id

characteristic: latitude

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: freshwater metagenome

characteristic: organism

text: Missing: Not provided

text: mgL

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: Cambridge, MD

text: TRUE

text: Missing: Not provided

text: TRUE

text: completed

text: Missing: Not provided

text: psu

text: fresh water

text: sequenced (16S)

text: freshwater metagenome

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

characteristic: title

text: Missing: Not reported

text: Missing: Not reported


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_1883:1883.2000.013.Crump.Artic.LTREB.main.lane1.NoIndex

characteristic: Submitter Id

text: Missing: Not provided

text: uM

text: Missing: Not provided

text: ugL

text: Missing: Not provided

text: Missing: Not reported

text: lake water

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: TRUE

text: small lake biome

text: freshwater habitat

text: water

text: fresh water

text: TRUE

text: USA:AK

text: TRUE

text: TRUE

characteristic: longitude

text: Missing: Not provided

characteristic: magnesium

text: Missing: Not provided

text: Missing: Not provided

characteristic: nitrate

text: freshwater metagenome

text: Missing: Not provided

characteristic: oxygen

text: mgL

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

characteristic: ph

text: Missing: Not provided

characteristic: ph method

text: Missing: Not provided

characteristic: phosphate

text: Cambridge, MD

text: TRUE

text: Missing: Not provided

characteristic: potassium

text: TRUE

characteristic: public

text: completed

text: Missing: Not provided

characteristic: salinity

text: psu

characteristic: salinity unit

text: prefiltered at 20 m, then collected on 0.22 m sterivex filter

text: fresh water

characteristic: sample type

text: sequenced (16S)

text: freshwater metagenome

text: Missing: Not provided

characteristic: silica

text: Missing: Not provided

characteristic: sodium

text: Missing: Not provided

characteristic: sulfate

text: Missing: Not provided

characteristic: temp

text: Missing: Not reported

text: Missing: Not reported


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_1883:1883.2000.014.Crump.Artic.LTREB.main.lane1.NoIndex

characteristic: Submitter Id

characteristic: anonymized name

text: Missing: Not provided

characteristic: calcium

text: uM

text: Missing: Not provided

characteristic: chla

text: ugL

text: Missing: Not provided

characteristic: chloride

text: Missing: Not reported

characteristic: depth

text: stream water

characteristic: description

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: TRUE

characteristic: elevation

text: freshwater biome

characteristic: env biome

text: freshwater habitat

characteristic: env feature

text: water

characteristic: env package

text: fresh water

text: TRUE

characteristic: extracted DNA avail now

text: USA:AK

characteristic: geo loc name

text: TRUE

text: TRUE

characteristic: host subject id

characteristic: latitude

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: freshwater metagenome

characteristic: organism

text: Missing: Not provided

text: mgL

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: Cambridge, MD

text: TRUE

text: Missing: Not provided

text: TRUE

text: completed

text: Missing: Not provided

text: psu

text: fresh water

text: sequenced (16S)

text: freshwater metagenome

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

characteristic: title

text: Missing: Not reported

text: Missing: Not reported


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_1883:1883.2000.015.Crump.Artic.LTREB.main.lane1.NoIndex

characteristic: Submitter Id

text: Missing: Not provided

text: uM

text: Missing: Not provided

text: ugL

text: Missing: Not provided

text: Missing: Not reported

text: lake water

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: TRUE

text: small lake biome

text: freshwater habitat

text: water

text: fresh water

text: TRUE

text: USA:AK

text: TRUE

text: TRUE

characteristic: longitude

text: Missing: Not provided

characteristic: magnesium

text: Missing: Not provided

text: Missing: Not provided

characteristic: nitrate

text: freshwater metagenome

text: Missing: Not provided

characteristic: oxygen

text: mgL

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

characteristic: ph

text: Missing: Not provided

characteristic: ph method

text: Missing: Not provided

characteristic: phosphate

text: Cambridge, MD

text: TRUE

text: Missing: Not provided

characteristic: potassium

text: TRUE

characteristic: public

text: completed

text: Missing: Not provided

characteristic: salinity

text: psu

characteristic: salinity unit

text: fresh water

characteristic: sample type

text: sequenced (16S)

text: freshwater metagenome

text: Missing: Not provided

characteristic: silica

text: Missing: Not provided

characteristic: sodium

text: Missing: Not provided

characteristic: sulfate

text: Missing: Not provided

characteristic: temp

text: Missing: Not reported

text: Missing: Not reported


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_1883:1883.2000.016.Crump.Artic.LTREB.main.lane1.NoIndex

characteristic: Submitter Id

characteristic: anonymized name

text: Missing: Not provided

characteristic: calcium

text: uM

text: Missing: Not provided

characteristic: chla

text: ugL

text: Missing: Not provided

characteristic: chloride

text: Missing: Not reported

characteristic: depth

text: lake water

characteristic: description

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: Missing: Not provided

text: TRUE

characteristic: elevation

text: small lake biome

characteristic: env biome

text: freshwater habitat

characteristic: env feature

text: water

characteristic: env package

text: fresh water

text: TRUE

characteristic: extracted DNA avail now

text: USA:AK

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