characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

text: Pacific oyster

text: Experimental sample. Sample title code: [original temperature][experimental temperature]_[infection]_[time point]. For details see study description and 'perturbation' and 'detailed conditions' fields

text: held in flowthrough aquarium, 22°C, well acclimated

text: healthy

text: aquatic, marine

text: organic

text: organic material, bodily fluid

text: Germany

text: Pacific oyster

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: adult

characteristic: life stage

characteristic: location details

text: f: ACGAGTGCGT; r: ACGCTCGACA or f: ACGAGTGCGT; r: AGCACTGTAG

text: Crassostrea gigas

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: temperature acclimated

characteristic: perturbation

characteristic: project name

text: syringe

characteristic: sample collection device or method

text: Crassostrea gigas

text: pyrosequencing

characteristic: substrate

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: temperature

text: C.gigas hemolymph microbiota WC_1_0


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:ALFRED WEGENER INSTITUTE FOR POLAR AND MARINE RESE

characteristic: Submitter Id

text: f: adapter A + key (4bp): CGTATCGCCTCCCTCGCGCCATCAG; r: adapter B + key (4bp): CTATGCGCCTTGCCAGCCCGCTCAG

characteristic: adapters

unit: L

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

characteristic: body site

characteristic: collection date

text: Pacific oyster

characteristic: common name

characteristic: description

text: 5 days after transfer from flowthrough to stationary seawater aquarium (both 8°C) and injection with Vibrio sp. D29w strain

characteristic: detailed conditions

text: dead

characteristic: disease status

text: aquatic, marine

characteristic: environment (biome)

text: organic

characteristic: environment (feature)

text: organic material, bodily fluid

characteristic: environment (material)

text: Germany

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

unit: ºC

characteristic: host body temperature

text: Pacific oyster

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: adult

text: Schleswig-Holstein, Wadden Sea (North Sea), island of Sylt, Kongishafen

text: f: TACGTCATCA; r: ACGCTCGACA or f: TACGTCATCA; r: AGCACTGTAG

characteristic: multiplex identifiers

text: Crassostrea gigas

text: initial denaturation:94degC_1min; denaturation:94degC_40s;annealing:55degC_30s; elongation:72degC_30s; final elongation:72degC_2min; 35 cycles

text: f: linker (3bp) + 16S_338r: CATGCTGCCTCCCGTAGGAGT; r: linker (2bp) + 16S_27F: TCAGAGTTTGATCMTGGCTCAG

text: temperature acclimated, infected

text: syringe

text: Crassostrea gigas

text: pyrosequencing

characteristic: sequencing method

text: seawater (local, supplied through cca 200 m long pipe, 30 um filtered and protein skimmed)

text: 16S rRNA

text: C.gigas hemolymph microbiota CC_1_5

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

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text: ALFRED WEGENER INSTITUTE FOR POLAR AND MARINE RESE

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

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characteristic: Submitter Id

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

text: Pacific oyster

text: 3 days after transfer from flowthrough to stationary seawater aquarium (both 8°C) and injection with soya-peptone medium

text: healthy

text: aquatic, marine

text: organic

text: organic material, bodily fluid

text: Germany

text: Pacific oyster

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: adult

characteristic: life stage

characteristic: location details

text: f: ACATACGCGT; r: AGACGCACTC or f: ACATACGCGT; r: ATATCGCGAG

text: Crassostrea gigas

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: temperature acclimated, mock-infected

characteristic: perturbation

characteristic: project name

text: syringe

characteristic: sample collection device or method

text: Crassostrea gigas

text: pyrosequencing

characteristic: substrate

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: temperature

text: C.gigas hemolymph microbiota CC_0_3


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

characteristic: body site

characteristic: collection date

text: Pacific oyster

characteristic: common name

characteristic: description

text: 7 days after transfer from flowthrough to stationary seawater aquarium (both 8°C) and injection with soya-peptone medium

characteristic: detailed conditions

text: healthy

characteristic: disease status

text: aquatic, marine

characteristic: environment (biome)

text: organic

characteristic: environment (feature)

text: organic material, bodily fluid

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host body temperature

text: Pacific oyster

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: adult

text: f: CGCGTATACA; r: AGACGCACTC or f: CGCGTATACA; r: ATATCGCGAG

characteristic: multiplex identifiers

text: Crassostrea gigas

text: temperature acclimated, mock-infected

text: syringe

text: Crassostrea gigas

text: pyrosequencing

characteristic: sequencing method

text: 16S rRNA

text: C.gigas hemolymph microbiota CC_0_7

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

text: Pacific oyster

text: 7 days after transfer from flowthrough to stationary seawater aquarium (both 8°C) and injection with Vibrio sp. D29w strain

text: healthy

text: aquatic, marine

text: organic

text: organic material, bodily fluid

text: Germany

text: Pacific oyster

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: adult

characteristic: life stage

characteristic: location details

text: f: AGTGCTACGA; r: AGACGCACTC or f: AGTGCTACGA; r: ATATCGCGAG

text: Crassostrea gigas

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: temperature acclimated, infected

characteristic: perturbation

characteristic: project name

text: syringe

characteristic: sample collection device or method

text: Crassostrea gigas

text: pyrosequencing

characteristic: substrate

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: temperature

text: C.gigas hemolymph microbiota CC_1_7


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

characteristic: body site

characteristic: collection date

text: Pacific oyster

characteristic: common name

text: Experimental sample. Sample title code: [original temperature][experimental temperature]_[infection]_[time point]. For details see study description and 'perturbation' and 'detailed conditions' fields

characteristic: description

text: held in flowthrough aquarium, 8°C, well acclimated

characteristic: detailed conditions

text: diseased

characteristic: disease status

text: aquatic, marine

characteristic: environment (biome)

text: organic

characteristic: environment (feature)

text: organic material, bodily fluid

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host body temperature

text: Pacific oyster

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: adult

text: f: TACACGTGAT; r: ACGCTCGACA or f: TACACGTGAT; r: AGCACTGTAG

characteristic: multiplex identifiers

text: Crassostrea gigas

text: temperature acclimated

text: syringe

text: Crassostrea gigas

text: pyrosequencing

characteristic: sequencing method

text: 16S rRNA

text: C.gigas hemolymph microbiota CW_1_0

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: f: adapter A + key (4bp): CGTATCGCCTCCCTCGCGCCATCAG; r: adapter B + key (4bp): CTATGCGCCTTGCCAGCCCGCTCAG

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

text: Pacific oyster

text: 5 days after transfer from flowthrough to stationary seawater aquarium, temperature change from 22°C to 8°C and injection with soya-peptone medium

text: healthy

text: aquatic, marine

text: organic

text: organic material, bodily fluid

text: Germany

text: Pacific oyster

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: adult

characteristic: life stage

characteristic: location details

text: f: CGATCGTATA; r: ACGCTCGACA or f: CGATCGTATA; r: AGCACTGTAG

text: Crassostrea gigas

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: temperature stressed, mock-infected

characteristic: perturbation

characteristic: project name

text: syringe

characteristic: sample collection device or method

text: Crassostrea gigas

text: pyrosequencing

characteristic: substrate

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: temperature

text: C.gigas hemolymph microbiota WC_0_5


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

characteristic: body site

characteristic: collection date

text: Pacific oyster

characteristic: common name

characteristic: description

text: 7 days after transfer from flowthrough to stationary seawater aquarium, temperature change from 8°C to 22°C and injection with soya-peptone medium

characteristic: detailed conditions

text: healthy

characteristic: disease status

text: aquatic, marine

characteristic: environment (biome)

text: organic

characteristic: environment (feature)

text: organic material, bodily fluid

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host body temperature

text: Pacific oyster

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: adult

text: Schleswig-Holstein, Wadden Sea (North Sea), island of Sylt, Kongishafen

text: f: CATACTCTAC; r: AGACGCACTC or f: CATACTCTAC; r: ATATCGCGAG

characteristic: multiplex identifiers

text: Crassostrea gigas

text: temperature stressed, mock-infected

text: syringe

text: Crassostrea gigas

text: pyrosequencing

characteristic: sequencing method

text: 16S rRNA

text: C.gigas hemolymph microbiota CW_0_7

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

text: Pacific oyster

text: 7 days after transfer from flowthrough to stationary seawater aquarium, temperature change from 22°C to 8°C and injection with soya-peptone medium

text: healthy

text: aquatic, marine

text: organic

text: organic material, bodily fluid

text: Germany

text: Pacific oyster

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: adult

characteristic: life stage

characteristic: location details

text: f: CGTACTCAGA; r: AGACGCACTC or f: CGTACTCAGA; r: ATATCGCGAG

text: Crassostrea gigas

characteristic: organism

text: initial denaturation:94degC_1min; denaturation:94degC_40s;annealing:55degC_30s; elongation:72degC_30s; final elongation:72degC_2min; 35 cycles

characteristic: pcr conditions

text: f: linker (3bp) + 16S_338r: CATGCTGCCTCCCGTAGGAGT; r: linker (2bp) + 16S_27F: TCAGAGTTTGATCMTGGCTCAG

characteristic: pcr primers

text: temperature stressed, mock-infected

characteristic: perturbation

characteristic: project name

text: syringe

characteristic: sample collection device or method

text: Crassostrea gigas

text: pyrosequencing

text: seawater (local, supplied through cca 200 m long pipe, 30 um filtered and protein skimmed)

characteristic: substrate

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: temperature

text: C.gigas hemolymph microbiota WC_0_7


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ALFRED WEGENER INSTITUTE FOR POLAR AND MARINE RESE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

characteristic: body site

characteristic: collection date

text: Pacific oyster

characteristic: common name

characteristic: description

characteristic: detailed conditions

text: diseased

characteristic: disease status

text: aquatic, marine

characteristic: environment (biome)

text: organic

characteristic: environment (feature)

text: organic material, bodily fluid

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host body temperature

text: Pacific oyster

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: adult

text: f: CACGCTACGT; r: ACGCTCGACA or f: CACGCTACGT; r: AGCACTGTAG

characteristic: multiplex identifiers

text: Crassostrea gigas

text: temperature acclimated

text: syringe

text: Crassostrea gigas

text: pyrosequencing

characteristic: sequencing method

text: 16S rRNA

text: C.gigas hemolymph microbiota CW_1_0

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

text: Pacific oyster

text: 3 days after transfer from flowthrough to stationary seawater aquarium (both 22°C) and injection with Vibrio sp. D29w strain

text: healthy

text: aquatic, marine

text: organic

text: organic material, bodily fluid

text: Germany

text: Pacific oyster

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: adult

characteristic: life stage

characteristic: location details

text: f: CAGTAGACGT; r: AGACGCACTC or f: CAGTAGACGT; r: ATATCGCGAG

text: Crassostrea gigas

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: temperature acclimated, infected

characteristic: perturbation

characteristic: project name

text: syringe

characteristic: sample collection device or method

text: Crassostrea gigas

text: pyrosequencing

characteristic: substrate

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: temperature

text: C.gigas hemolymph microbiota WW_1_3


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

characteristic: body site

characteristic: collection date

text: Pacific oyster

characteristic: common name

text: Experimental sample. Sample title code: [original temperature][experimental temperature]_[infection]_[time point]. For details see study description and 'perturbation' and 'detailed conditions' fields

characteristic: description

text: 5 days after transfer from flowthrough to stationary seawater aquarium (both 22°C) and injection with Vibrio sp. D29w strain

characteristic: detailed conditions

text: healthy

characteristic: disease status

text: aquatic, marine

characteristic: environment (biome)

text: organic

characteristic: environment (feature)

text: organic material, bodily fluid

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host body temperature

text: Pacific oyster

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: adult

text: f: AGTAGTGATC; r: ACGCTCGACA or f: AGTAGTGATC; r: AGCACTGTAG

characteristic: multiplex identifiers

text: Crassostrea gigas

text: temperature acclimated, infected

text: syringe

text: Crassostrea gigas

text: pyrosequencing

characteristic: sequencing method

text: 16S rRNA

text: C.gigas hemolymph microbiota WW_1_5

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: f: adapter A + key (4bp): CGTATCGCCTCCCTCGCGCCATCAG; r: adapter B + key (4bp): CTATGCGCCTTGCCAGCCCGCTCAG

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

text: Pacific oyster

text: 5 days after transfer from flowthrough to stationary seawater aquarium, temperature change from 8°C to 22°C and injection with Vibrio sp. D29w strain

text: healthy

text: aquatic, marine

text: organic

text: organic material, bodily fluid

text: Germany

text: Pacific oyster

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: adult

characteristic: life stage

characteristic: location details

text: f: CTCTACGCTC; r: ACGCTCGACA or f: CTCTACGCTC; r: AGCACTGTAG

text: Crassostrea gigas

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: temperature stressed, infected

characteristic: perturbation

characteristic: project name

text: syringe

characteristic: sample collection device or method

text: Crassostrea gigas

text: pyrosequencing

characteristic: substrate

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: temperature

text: C.gigas hemolymph microbiota CW_1_5


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

characteristic: body site

characteristic: collection date

text: Pacific oyster

characteristic: common name

characteristic: description

text: held in flowthrough aquarium, 22°C, well acclimated

characteristic: detailed conditions

text: healthy

characteristic: disease status

text: aquatic, marine

characteristic: environment (biome)

text: organic

characteristic: environment (feature)

text: organic material, bodily fluid

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host body temperature

text: Pacific oyster

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: adult

text: Schleswig-Holstein, Wadden Sea (North Sea), island of Sylt, Kongishafen

text: f: ACGACTACAG; r: ACGCTCGACA or f: ACGACTACAG; r: AGCACTGTAG

characteristic: multiplex identifiers

text: Crassostrea gigas

text: temperature acclimated

text: syringe

text: Crassostrea gigas

text: pyrosequencing

characteristic: sequencing method

text: 16S rRNA

text: C.gigas hemolymph microbiota WC_1_0

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

text: Pacific oyster

text: 5 days after transfer from flowthrough to stationary seawater aquarium (both 8°C) and injection with Vibrio sp. D29w strain

text: healthy

text: aquatic, marine

text: organic

text: organic material, bodily fluid

text: Germany

text: Pacific oyster

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: adult

characteristic: life stage

characteristic: location details

text: f: TAGTCGCATA; r: ACGCTCGACA or f: TAGTCGCATA; r: AGCACTGTAG

text: Crassostrea gigas

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: temperature acclimated, infected

characteristic: perturbation

characteristic: project name

text: syringe

characteristic: sample collection device or method

text: Crassostrea gigas

text: pyrosequencing

characteristic: substrate

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: temperature

text: C.gigas hemolymph microbiota CC_1_5


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

characteristic: body site

characteristic: collection date

text: Pacific oyster

characteristic: common name

characteristic: description

text: 3 days after transfer from flowthrough to stationary seawater aquarium, temperature change from 8°C to 22°C and injection with Vibrio sp. D29w strain

characteristic: detailed conditions

text: healthy

characteristic: disease status

text: aquatic, marine

characteristic: environment (biome)

text: organic

characteristic: environment (feature)

text: organic material, bodily fluid

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host body temperature

text: Pacific oyster

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: adult

text: f: ACTAGCAGTA; r: AGACGCACTC or f: ACTAGCAGTA; r: ATATCGCGAG

characteristic: multiplex identifiers

text: Crassostrea gigas

text: initial denaturation:94degC_1min; denaturation:94degC_40s;annealing:55degC_30s; elongation:72degC_30s; final elongation:72degC_2min; 35 cycles

text: f: linker (3bp) + 16S_338r: CATGCTGCCTCCCGTAGGAGT; r: linker (2bp) + 16S_27F: TCAGAGTTTGATCMTGGCTCAG

text: temperature stressed, infected

text: syringe

text: Crassostrea gigas

text: pyrosequencing

characteristic: sequencing method

text: 16S rRNA

text: C.gigas hemolymph microbiota CW_1_3

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ALFRED WEGENER INSTITUTE FOR POLAR AND MARINE RESE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

text: Pacific oyster

text: held in flowthrough aquarium, 8°C, well acclimated

text: healthy

text: aquatic, marine

text: organic

text: organic material, bodily fluid

text: Germany

text: Pacific oyster

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: adult

characteristic: life stage

characteristic: location details

text: f: TGTACTACTC; r: ACGCTCGACA or f: TGTACTACTC; r: AGCACTGTAG

text: Crassostrea gigas

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: temperature acclimated

characteristic: perturbation

characteristic: project name

text: syringe

characteristic: sample collection device or method

text: Crassostrea gigas

text: pyrosequencing

text: seawater (local, supplied through cca 200 m long pipe, 30 um filtered and protein skimmed)

characteristic: substrate

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: temperature

text: C.gigas hemolymph microbiota CC_1_0


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

characteristic: body site

characteristic: collection date

text: Pacific oyster

characteristic: common name

text: Experimental sample. Sample title code: [original temperature][experimental temperature]_[infection]_[time point]. For details see study description and 'perturbation' and 'detailed conditions' fields

characteristic: description

text: 3 days after transfer from flowthrough to stationary seawater aquarium (both 8°C) and injection with Vibrio sp. D29w strain

characteristic: detailed conditions

text: healthy

characteristic: disease status

text: aquatic, marine

characteristic: environment (biome)

text: organic

characteristic: environment (feature)

text: organic material, bodily fluid

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host body temperature

text: Pacific oyster

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: adult

text: f: AGCACTGTAG; r: AGACGCACTC or f: AGCACTGTAG; r: ATATCGCGAG

characteristic: multiplex identifiers

text: Crassostrea gigas

text: temperature acclimated, infected

text: syringe

text: Crassostrea gigas

text: pyrosequencing

characteristic: sequencing method

text: 16S rRNA

text: C.gigas hemolymph microbiota CC_1_3

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: f: adapter A + key (4bp): CGTATCGCCTCCCTCGCGCCATCAG; r: adapter B + key (4bp): CTATGCGCCTTGCCAGCCCGCTCAG

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

text: Pacific oyster

text: healthy

text: aquatic, marine

text: organic

text: organic material, bodily fluid

text: Germany

text: Pacific oyster

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: adult

characteristic: life stage

characteristic: location details

text: f: CAGTAGACGT; r: ACGCTCGACA or f: CAGTAGACGT; r: AGCACTGTAG

text: Crassostrea gigas

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: temperature acclimated

characteristic: perturbation

characteristic: project name

text: syringe

characteristic: sample collection device or method

text: Crassostrea gigas

text: pyrosequencing

characteristic: substrate

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: temperature

text: C.gigas hemolymph microbiota WW_1_0


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

characteristic: body site

characteristic: collection date

text: Pacific oyster

characteristic: common name

characteristic: description

text: 5 days after transfer from flowthrough to stationary seawater aquarium (both 8°C) and injection with soya-peptone medium

characteristic: detailed conditions

text: healthy

characteristic: disease status

text: aquatic, marine

characteristic: environment (biome)

text: organic

characteristic: environment (feature)

text: organic material, bodily fluid

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host body temperature

text: Pacific oyster

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: adult

text: Schleswig-Holstein, Wadden Sea (North Sea), island of Sylt, Kongishafen

text: f: ACACATACGC; r: ACGCTCGACA or f: ACACATACGC; r: AGCACTGTAG

characteristic: multiplex identifiers

text: Crassostrea gigas

text: temperature acclimated, mock-infected

text: syringe

text: Crassostrea gigas

text: pyrosequencing

characteristic: sequencing method

text: 16S rRNA

text: C.gigas hemolymph microbiota CC_0_5

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

text: Pacific oyster

text: 3 days after transfer from flowthrough to stationary seawater aquarium (both 8°C) and injection with soya-peptone medium

text: healthy

text: aquatic, marine

text: organic

text: organic material, bodily fluid

text: Germany

text: Pacific oyster

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: adult

characteristic: life stage

characteristic: location details

text: f: TACGAGTATG; r: AGACGCACTC or f: TACGAGTATG; r: ATATCGCGAG

text: Crassostrea gigas

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: temperature acclimated, mock-infected

characteristic: perturbation

characteristic: project name

text: syringe

characteristic: sample collection device or method

text: Crassostrea gigas

text: pyrosequencing

characteristic: substrate

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: temperature

text: C.gigas hemolymph microbiota CC_0_3


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

characteristic: body site

characteristic: collection date

text: Pacific oyster

characteristic: common name

characteristic: description

text: held in flowthrough aquarium, 22°C, well acclimated

characteristic: detailed conditions

text: healthy

characteristic: disease status

text: aquatic, marine

characteristic: environment (biome)

text: organic

characteristic: environment (feature)

text: organic material, bodily fluid

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host body temperature

text: Pacific oyster

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: adult

text: f: TGACGTATGT; r: ACGCTCGACA or f: TGACGTATGT; r: AGCACTGTAG

characteristic: multiplex identifiers

text: Crassostrea gigas

text: temperature acclimated

text: syringe

text: Crassostrea gigas

text: pyrosequencing

characteristic: sequencing method

text: 16S rRNA

text: C.gigas hemolymph microbiota WW_1_0

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

text: Pacific oyster

text: 5 days after transfer from flowthrough to stationary seawater aquarium, temperature change from 22°C to 8°C and injection with soya-peptone medium

text: healthy

text: aquatic, marine

text: organic

text: organic material, bodily fluid

text: Germany

text: Pacific oyster

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: adult

characteristic: life stage

characteristic: location details

text: f: CGTACTCAGA; r: ACGCTCGACA or f: CGTACTCAGA; r: AGCACTGTAG

text: Crassostrea gigas

characteristic: organism

text: initial denaturation:94degC_1min; denaturation:94degC_40s;annealing:55degC_30s; elongation:72degC_30s; final elongation:72degC_2min; 35 cycles

characteristic: pcr conditions

text: f: linker (3bp) + 16S_338r: CATGCTGCCTCCCGTAGGAGT; r: linker (2bp) + 16S_27F: TCAGAGTTTGATCMTGGCTCAG

characteristic: pcr primers

text: temperature stressed, mock-infected

characteristic: perturbation

characteristic: project name

text: syringe

characteristic: sample collection device or method

text: Crassostrea gigas

text: pyrosequencing

characteristic: substrate

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: temperature

text: C.gigas hemolymph microbiota WC_0_5


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ALFRED WEGENER INSTITUTE FOR POLAR AND MARINE RESE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

characteristic: body site

characteristic: collection date

text: Pacific oyster

characteristic: common name

characteristic: description

text: 3 days after transfer from flowthrough to stationary seawater aquarium, temperature change from 22°C to 8°C and injection with soya-peptone medium

characteristic: detailed conditions

text: healthy

characteristic: disease status

text: aquatic, marine

characteristic: environment (biome)

text: organic

characteristic: environment (feature)

text: organic material, bodily fluid

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host body temperature

text: Pacific oyster

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: adult

text: f: TCTCTATGCG; r: AGACGCACTC or f: TCTCTATGCG; r: ATATCGCGAG

characteristic: multiplex identifiers

text: Crassostrea gigas

text: temperature stressed, mock-infected

text: syringe

text: Crassostrea gigas

text: pyrosequencing

characteristic: sequencing method

text: seawater (local, supplied through cca 200 m long pipe, 30 um filtered and protein skimmed)

text: 16S rRNA

text: C.gigas hemolymph microbiota WC_0_3

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: f: adapter A + key (4bp): CGTATCGCCTCCCTCGCGCCATCAG; r: adapter B + key (4bp): CTATGCGCCTTGCCAGCCCGCTCAG

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

text: Pacific oyster

text: Experimental sample. Sample title code: [original temperature][experimental temperature]_[infection]_[time point]. For details see study description and 'perturbation' and 'detailed conditions' fields

text: held in flowthrough aquarium, 8°C, well acclimated

text: healthy

text: aquatic, marine

text: organic

text: organic material, bodily fluid

text: Germany

text: Pacific oyster

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: adult

characteristic: life stage

characteristic: location details

text: f: CGAGAGATAC; r: ACGCTCGACA or f: CGAGAGATAC; r: AGCACTGTAG

text: Crassostrea gigas

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: temperature acclimated

characteristic: perturbation

characteristic: project name

text: syringe

characteristic: sample collection device or method

text: Crassostrea gigas

text: pyrosequencing

characteristic: substrate

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: temperature

text: C.gigas hemolymph microbiota CC_1_0


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

characteristic: body site

characteristic: collection date

text: Pacific oyster

characteristic: common name

characteristic: description

text: 7 days after transfer from flowthrough to stationary seawater aquarium (both 22°C) and injection with soya-peptone medium

characteristic: detailed conditions

text: healthy

characteristic: disease status

text: aquatic, marine

characteristic: environment (biome)

text: organic

characteristic: environment (feature)

text: organic material, bodily fluid

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host body temperature

text: Pacific oyster

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: adult

text: Schleswig-Holstein, Wadden Sea (North Sea), island of Sylt, Kongishafen

text: f: CGTCGATCTC; r: AGACGCACTC or f: CGTCGATCTC; r: ATATCGCGAG

characteristic: multiplex identifiers

text: Crassostrea gigas

text: temperature acclimated, mock-infected

text: syringe

text: Crassostrea gigas

text: pyrosequencing

characteristic: sequencing method

text: 16S rRNA

text: C.gigas hemolymph microbiota WW_0_7

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

text: Pacific oyster

text: 7 days after transfer from flowthrough to stationary seawater aquarium, temperature change from 22°C to 8°C and injection with Vibrio sp. D29w strain

text: dead

text: aquatic, marine

text: organic

text: organic material, bodily fluid

text: Germany

text: Pacific oyster

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: adult

characteristic: life stage

characteristic: location details

text: f: TCACGCGAGA; r: AGACGCACTC or f: TCACGCGAGA; r: ATATCGCGAG

text: Crassostrea gigas

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: temperature stressed, infected

characteristic: perturbation

characteristic: project name

text: syringe

characteristic: sample collection device or method

text: Crassostrea gigas

text: pyrosequencing

characteristic: substrate

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: temperature

text: C.gigas hemolymph microbiota WC_1_7


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

characteristic: body site

characteristic: collection date

text: Pacific oyster

characteristic: common name

characteristic: description

text: held in flowthrough aquarium, 22°C, well acclimated

characteristic: detailed conditions

text: healthy

characteristic: disease status

text: aquatic, marine

characteristic: environment (biome)

text: organic

characteristic: environment (feature)

text: organic material, bodily fluid

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host body temperature

text: Pacific oyster

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: adult

text: f: TCGTCGCTCG; r: ACGCTCGACA or f: TCGTCGCTCG; r: AGCACTGTAG

characteristic: multiplex identifiers

text: Crassostrea gigas

text: temperature acclimated

text: syringe

text: Crassostrea gigas

text: pyrosequencing

characteristic: sequencing method

text: 16S rRNA

text: C.gigas hemolymph microbiota WC_0_0

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

text: Pacific oyster

text: 3 days after transfer from flowthrough to stationary seawater aquarium (both 22°C) and injection with Vibrio sp. D29w strain

text: dead

text: aquatic, marine

text: organic

text: organic material, bodily fluid

text: Germany

text: Pacific oyster

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: adult

characteristic: life stage

characteristic: location details

text: f: TACAGATCGT; r: AGACGCACTC or f: TACAGATCGT; r: ATATCGCGAG

text: Crassostrea gigas

characteristic: organism

text: initial denaturation:94degC_1min; denaturation:94degC_40s;annealing:55degC_30s; elongation:72degC_30s; final elongation:72degC_2min; 35 cycles

characteristic: pcr conditions

characteristic: pcr primers

text: temperature acclimated, infected

characteristic: perturbation

characteristic: project name

text: syringe

characteristic: sample collection device or method

text: Crassostrea gigas

text: pyrosequencing

characteristic: substrate

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: temperature

text: C.gigas hemolymph microbiota WW_1_3


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ALFRED WEGENER INSTITUTE FOR POLAR AND MARINE RESE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

characteristic: body site

characteristic: collection date

text: Pacific oyster

characteristic: common name

characteristic: description

text: 7 days after transfer from flowthrough to stationary seawater aquarium, temperature change from 22°C to 8°C and injection with soya-peptone medium

characteristic: detailed conditions

text: healthy

characteristic: disease status

text: aquatic, marine

characteristic: environment (biome)

text: organic

characteristic: environment (feature)

text: organic material, bodily fluid

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host body temperature

text: Pacific oyster

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: adult

text: f: TCTGACGTCA; r: AGACGCACTC or f: TCTGACGTCA; r: ATATCGCGAG

characteristic: multiplex identifiers

text: Crassostrea gigas

text: f: linker (3bp) + 16S_338r: CATGCTGCCTCCCGTAGGAGT; r: linker (2bp) + 16S_27F: TCAGAGTTTGATCMTGGCTCAG

text: temperature stressed, mock-infected

text: syringe

text: Crassostrea gigas

text: pyrosequencing

characteristic: sequencing method

text: 16S rRNA

text: C.gigas hemolymph microbiota WC_0_7

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: f: adapter A + key (4bp): CGTATCGCCTCCCTCGCGCCATCAG; r: adapter B + key (4bp): CTATGCGCCTTGCCAGCCCGCTCAG

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

text: Pacific oyster

text: Experimental sample. Sample title code: [original temperature][experimental temperature]_[infection]_[time point]. For details see study description and 'perturbation' and 'detailed conditions' fields

text: 3 days after transfer from flowthrough to stationary seawater aquarium (both 8°C) and injection with Vibrio sp. D29w strain

text: diseased

text: aquatic, marine

text: organic

text: organic material, bodily fluid

text: Germany

text: Pacific oyster

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: adult

characteristic: life stage

characteristic: location details

text: f: CTCGCGTGTC; r: AGACGCACTC or f: CTCGCGTGTC; r: ATATCGCGAG

text: Crassostrea gigas

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: temperature acclimated, infected

characteristic: perturbation

characteristic: project name

text: syringe

characteristic: sample collection device or method

text: Crassostrea gigas

text: pyrosequencing

text: seawater (local, supplied through cca 200 m long pipe, 30 um filtered and protein skimmed)

characteristic: substrate

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: temperature

text: C.gigas hemolymph microbiota CC_1_3


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

characteristic: body site

characteristic: collection date

text: Pacific oyster

characteristic: common name

characteristic: description

text: held in flowthrough aquarium, 8°C, well acclimated

characteristic: detailed conditions

text: healthy

characteristic: disease status

text: aquatic, marine

characteristic: environment (biome)

text: organic

characteristic: environment (feature)

text: organic material, bodily fluid

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host body temperature

text: Pacific oyster

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: adult

text: Schleswig-Holstein, Wadden Sea (North Sea), island of Sylt, Kongishafen

text: f: ATACGACGTA; r: ACGCTCGACA or f: ATACGACGTA; r: AGCACTGTAG

characteristic: multiplex identifiers

text: Crassostrea gigas

text: temperature acclimated

text: syringe

text: Crassostrea gigas

text: pyrosequencing

characteristic: sequencing method

text: 16S rRNA

text: C.gigas hemolymph microbiota CC_1_0

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

text: Pacific oyster

text: diseased

text: aquatic, marine

text: organic

text: organic material, bodily fluid

text: Germany

text: Pacific oyster

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: adult

characteristic: life stage

characteristic: location details

text: f: ATAGAGTACT; r: ACGCTCGACA or f: ATAGAGTACT; r: AGCACTGTAG

text: Crassostrea gigas

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: temperature acclimated

characteristic: perturbation

characteristic: project name

text: syringe

characteristic: sample collection device or method

text: Crassostrea gigas

text: pyrosequencing

characteristic: substrate

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: temperature

text: C.gigas hemolymph microbiota CW_1_0


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

characteristic: body site

characteristic: collection date

text: Pacific oyster

characteristic: common name

characteristic: description

text: 3 days after transfer from flowthrough to stationary seawater aquarium, temperature change from 22°C to 8°C and injection with soya-peptone medium

characteristic: detailed conditions

text: healthy

characteristic: disease status

text: aquatic, marine

characteristic: environment (biome)

text: organic

characteristic: environment (feature)

text: organic material, bodily fluid

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host body temperature

text: Pacific oyster

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: adult

text: f: TGATACGTCT; r: AGACGCACTC or f: TGATACGTCT; r: ATATCGCGAG

characteristic: multiplex identifiers

text: Crassostrea gigas

text: temperature stressed, mock-infected

text: syringe

text: Crassostrea gigas

text: pyrosequencing

characteristic: sequencing method

text: 16S rRNA

text: C.gigas hemolymph microbiota WC_0_3

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

text: Pacific oyster

text: 7 days after transfer from flowthrough to stationary seawater aquarium (both 8°C) and injection with soya-peptone medium

text: healthy

text: aquatic, marine

text: organic

text: organic material, bodily fluid

text: Germany

text: Pacific oyster

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: adult

characteristic: life stage

characteristic: location details

text: f: CGCAGTACGA; r: AGACGCACTC or f: CGCAGTACGA; r: ATATCGCGAG

text: Crassostrea gigas

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: temperature acclimated, mock-infected

characteristic: perturbation

characteristic: project name

text: syringe

characteristic: sample collection device or method

text: Crassostrea gigas

text: pyrosequencing

characteristic: substrate

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: temperature

text: C.gigas hemolymph microbiota CC_0_7


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ALFRED WEGENER INSTITUTE FOR POLAR AND MARINE RESE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

characteristic: body site

characteristic: collection date

text: Pacific oyster

characteristic: common name

characteristic: description

text: 7 days after transfer from flowthrough to stationary seawater aquarium, temperature change from 22°C to 8°C and injection with Vibrio sp. D29w strain

characteristic: detailed conditions

text: healthy

characteristic: disease status

text: aquatic, marine

characteristic: environment (biome)

text: organic

characteristic: environment (feature)

text: organic material, bodily fluid

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host body temperature

text: Pacific oyster

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: adult

text: f: TATATATACA; r: AGACGCACTC or f: TATATATACA; r: ATATCGCGAG

characteristic: multiplex identifiers

text: Crassostrea gigas

text: initial denaturation:94degC_1min; denaturation:94degC_40s;annealing:55degC_30s; elongation:72degC_30s; final elongation:72degC_2min; 35 cycles

text: temperature stressed, infected

text: syringe

text: Crassostrea gigas

text: pyrosequencing

characteristic: sequencing method

text: 16S rRNA

text: C.gigas hemolymph microbiota WC_1_7

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: f: adapter A + key (4bp): CGTATCGCCTCCCTCGCGCCATCAG; r: adapter B + key (4bp): CTATGCGCCTTGCCAGCCCGCTCAG

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

text: Pacific oyster

text: 7 days after transfer from flowthrough to stationary seawater aquarium, temperature change from 8°C to 22°C and injection with soya-peptone medium

text: healthy

text: aquatic, marine

text: organic

text: organic material, bodily fluid

text: Germany

text: Pacific oyster

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: adult

characteristic: life stage

characteristic: location details

text: f: CACGTAGATC; r: AGACGCACTC or f: CACGTAGATC; r: ATATCGCGAG

text: Crassostrea gigas

characteristic: organism

characteristic: pcr conditions

text: f: linker (3bp) + 16S_338r: CATGCTGCCTCCCGTAGGAGT; r: linker (2bp) + 16S_27F: TCAGAGTTTGATCMTGGCTCAG

characteristic: pcr primers

text: temperature stressed, mock-infected

characteristic: perturbation

characteristic: project name

text: syringe

characteristic: sample collection device or method

text: Crassostrea gigas

text: pyrosequencing

characteristic: substrate

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: temperature

text: C.gigas hemolymph microbiota CW_0_7


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

characteristic: body site

characteristic: collection date

text: Pacific oyster

characteristic: common name

text: Experimental sample. Sample title code: [original temperature][experimental temperature]_[infection]_[time point]. For details see study description and 'perturbation' and 'detailed conditions' fields

characteristic: description

text: 7 days after transfer from flowthrough to stationary seawater aquarium, temperature change from 22°C to 8°C and injection with soya-peptone medium

characteristic: detailed conditions

text: healthy

characteristic: disease status

text: aquatic, marine

characteristic: environment (biome)

text: organic

characteristic: environment (feature)

text: organic material, bodily fluid

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host body temperature

text: Pacific oyster

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: adult

text: f: CTACGCTCTA; r: AGACGCACTC or f: CTACGCTCTA; r: ATATCGCGAG

characteristic: multiplex identifiers

text: Crassostrea gigas

text: temperature stressed, mock-infected

text: syringe

text: Crassostrea gigas

text: pyrosequencing

characteristic: sequencing method

text: seawater (local, supplied through cca 200 m long pipe, 30 um filtered and protein skimmed)

text: 16S rRNA

text: C.gigas hemolymph microbiota WC_0_7

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

text: Pacific oyster

text: held in flowthrough aquarium, 22°C, well acclimated

text: diseased

text: aquatic, marine

text: organic

text: organic material, bodily fluid

text: Germany

text: Pacific oyster

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: adult

characteristic: life stage

text: Schleswig-Holstein, Wadden Sea (North Sea), island of Sylt, Kongishafen

characteristic: location details

text: f: TACAGATCGT; r: ACGCTCGACA or f: TACAGATCGT; r: AGCACTGTAG

text: Crassostrea gigas

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: temperature acclimated

characteristic: perturbation

characteristic: project name

text: syringe

characteristic: sample collection device or method

text: Crassostrea gigas

text: pyrosequencing

characteristic: substrate

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: temperature

text: C.gigas hemolymph microbiota WW_1_0


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

characteristic: body site

characteristic: collection date

text: Pacific oyster

characteristic: common name

characteristic: description

text: 5 days after transfer from flowthrough to stationary seawater aquarium, temperature change from 8°C to 22°C and injection with soya-peptone medium

characteristic: detailed conditions

text: healthy

characteristic: disease status

text: aquatic, marine

characteristic: environment (biome)

text: organic

characteristic: environment (feature)

text: organic material, bodily fluid

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host body temperature

text: Pacific oyster

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: adult

text: f: ACAGTCGTGC; r: ACGCTCGACA or f: ACAGTCGTGC; r: AGCACTGTAG

characteristic: multiplex identifiers

text: Crassostrea gigas

text: temperature stressed, mock-infected

text: syringe

text: Crassostrea gigas

text: pyrosequencing

characteristic: sequencing method

text: 16S rRNA

text: C.gigas hemolymph microbiota CW_0_5

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ALFRED WEGENER INSTITUTE FOR POLAR AND MARINE RESE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

text: Pacific oyster

text: 5 days after transfer from flowthrough to stationary seawater aquarium (both 22°C) and injection with Vibrio sp. D29w strain

text: healthy

text: aquatic, marine

text: organic

text: organic material, bodily fluid

text: Germany

text: Pacific oyster

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: adult

characteristic: life stage

characteristic: location details

text: f: ACTCATCTAC; r: ACGCTCGACA or f: ACTCATCTAC; r: AGCACTGTAG

text: Crassostrea gigas

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: temperature acclimated, infected

characteristic: perturbation

characteristic: project name

text: syringe

characteristic: sample collection device or method

text: Crassostrea gigas

text: pyrosequencing

characteristic: substrate

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: temperature

text: C.gigas hemolymph microbiota WW_1_5


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

characteristic: body site

characteristic: collection date

text: Pacific oyster

characteristic: common name

characteristic: description

text: 3 days after transfer from flowthrough to stationary seawater aquarium, temperature change from 8°C to 22°C and injection with soya-peptone medium

characteristic: detailed conditions

text: healthy

characteristic: disease status

text: aquatic, marine

characteristic: environment (biome)

text: organic

characteristic: environment (feature)

text: organic material, bodily fluid

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host body temperature

text: Pacific oyster

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: adult

text: f: ACGCGAGTAT; r: AGACGCACTC or f: ACGCGAGTAT; r: ATATCGCGAG

characteristic: multiplex identifiers

text: Crassostrea gigas

text: initial denaturation:94degC_1min; denaturation:94degC_40s;annealing:55degC_30s; elongation:72degC_30s; final elongation:72degC_2min; 35 cycles

text: temperature stressed, mock-infected

text: syringe

text: Crassostrea gigas

text: pyrosequencing

characteristic: sequencing method

text: 16S rRNA

text: C.gigas hemolymph microbiota CW_0_3

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: f: adapter A + key (4bp): CGTATCGCCTCCCTCGCGCCATCAG; r: adapter B + key (4bp): CTATGCGCCTTGCCAGCCCGCTCAG

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

text: Pacific oyster

text: 3 days after transfer from flowthrough to stationary seawater aquarium (both 8°C) and injection with soya-peptone medium

text: healthy

text: aquatic, marine

text: organic

text: organic material, bodily fluid

text: Germany

text: Pacific oyster

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: adult

characteristic: life stage

characteristic: location details

text: f: CGTCTAGTAC; r: AGACGCACTC or f: CGTCTAGTAC; r: ATATCGCGAG

text: Crassostrea gigas

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: temperature acclimated, mock-infected

characteristic: perturbation

characteristic: project name

text: syringe

characteristic: sample collection device or method

text: Crassostrea gigas

text: pyrosequencing

characteristic: substrate

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: temperature

text: C.gigas hemolymph microbiota CC_0_3


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: amount or size of sample collected

text: hemolymph

characteristic: body habitat

text: hemolymph

characteristic: body product

text: adductor muscle

characteristic: body site

characteristic: collection date

text: Pacific oyster

characteristic: common name

text: Experimental sample. Sample title code: [original temperature][experimental temperature]_[infection]_[time point]. For details see study description and 'perturbation' and 'detailed conditions' fields

characteristic: description

characteristic: detailed conditions

text: healthy

characteristic: disease status

text: aquatic, marine

characteristic: environment (biome)

text: organic

characteristic: environment (feature)

text: organic material, bodily fluid

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host body temperature

text: Pacific oyster

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: adult

text: f: TACTCTCGTG; r: ACGCTCGACA or f: TACTCTCGTG; r: AGCACTGTAG

characteristic: multiplex identifiers

text: Crassostrea gigas

text: f: linker (3bp) + 16S_338r: CATGCTGCCTCCCGTAGGAGT; r: linker (2bp) + 16S_27F: TCAGAGTTTGATCMTGGCTCAG

text: temperature acclimated

text: syringe

text: Crassostrea gigas

text: pyrosequencing

characteristic: sequencing method

text: 16S rRNA

text: C.gigas hemolymph microbiota WC_1_0

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CENTRE FOR ECOLOGY AND HYDROLOGY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:CENTRE FOR ECOLOGY AND HYDROLOGY

characteristic: Submitter Id

text: Freshwater

text: Freshwater

text: Freshwater

text: United Kingdom

characteristic: geographic location (country and/or sea)

unit: m

characteristic: geographic location (depth)

text: metagenome

text: metagenome

characteristic: organism

text: Exploring the River Continuum Concept for Bacterioplankton

characteristic: project name

text: metagenome

text: water

characteristic: water environmental package

type: has member


text: D

characteristic: Donor/Acceptor

text: TNO

text: public

text: 2 or 3/week

characteristic: Reported Kissing with partner Frequency

text: 2 to 3 days

characteristic: Time since last intimate kissing with partner

characteristic: age

characteristic: collection date

text: human

characteristic: common name

text: Couple 1

characteristic: couple id

text: Human associated

characteristic: environment (biome)

text: Mouth

characteristic: environment (feature)

text: Saliva

characteristic: environment (material)

text: Netherlands

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Saliva

characteristic: host body product

text: female

characteristic: host sex

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: Homo sapiens

text: Shaping the oral microbiota by intimate kissing

characteristic: sampling time point

text: Homo sapiens

text: MiSeq Illumina

characteristic: sequencing method

text: Oral-Microbiota: S1ai1


text: D

characteristic: Donor/Acceptor

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: TNO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: 2 or 3/week

characteristic: Reported Kissing with partner Frequency

characteristic: SRA accession

characteristic: Submitter Id

text: 3 to 3 days

text: human

text: Couple 1

text: Human associated

text: Mouth

text: Saliva

text: Netherlands

characteristic: geographic location (country and/or sea)

text: Saliva

text: female

text: host-associated

text: mimarks-survey

text: Homo sapiens

characteristic: organism

characteristic: project name

text: Homo sapiens

text: MiSeq Illumina

text: Oral-Microbiota: S1bi1

characteristic: title


text: D

text: TNO

text: public

text: 2 or 3/week

text: 4 to 3 days

characteristic: Time since last intimate kissing with partner

characteristic: age

characteristic: collection date

text: human

characteristic: common name

text: Couple 2

characteristic: couple id

text: Human associated

characteristic: environment (biome)

text: Mouth

characteristic: environment (feature)

text: Saliva

characteristic: environment (material)

text: Netherlands

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Saliva

characteristic: host body product

text: female

characteristic: host sex

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: Homo sapiens

characteristic: sampling time point

text: Homo sapiens

text: MiSeq Illumina

characteristic: sequencing method

text: Oral-Microbiota: S2bi1


text: D

characteristic: Donor/Acceptor

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: TNO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: 2 or 3/week

characteristic: Reported Kissing with partner Frequency

characteristic: SRA accession

characteristic: Submitter Id

text: 5 to 3 days

text: human

text: Couple 3

text: Human associated

text: Mouth

text: Saliva

text: Netherlands

characteristic: geographic location (country and/or sea)

text: Saliva

text: female

text: host-associated

text: mimarks-survey

text: Homo sapiens

characteristic: organism

characteristic: project name

text: Homo sapiens

text: MiSeq Illumina

text: Oral-Microbiota: S3ai1

characteristic: title


text: D

text: TNO

text: public

text: 2 or 3/week

text: 6 to 3 days

characteristic: Time since last intimate kissing with partner

characteristic: age

characteristic: collection date

text: human

characteristic: common name

text: Couple 5

characteristic: couple id

text: Human associated

characteristic: environment (biome)

text: Mouth

characteristic: environment (feature)

text: Saliva

characteristic: environment (material)

text: Netherlands

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Saliva

characteristic: host body product

text: female

characteristic: host sex

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: Homo sapiens

characteristic: sampling time point

text: Homo sapiens

text: MiSeq Illumina

characteristic: sequencing method

text: Oral-Microbiota: S3bi1


text: A

characteristic: Donor/Acceptor

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

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