characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA DIJON

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: anthropogenic geographic feature

characteristic: environment (feature)

text: root

characteristic: environment (material)

text: nitrogen & phosphorus

text: France

text: Plantago lanceolata

text: metagenome

text: root associated fungus metagenome

text: plant-associated

text: root associated fungus metagenome


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: INRA DIJON

text: public

tag: Namespace:INRA DIJON

text: Glomeromycota associated to plantago lancoelata roots assessed by 454-pyrosequencing of RPB1 gene

text: terrestrial biome

text: anthropogenic geographic feature

text: root

text: Phosphorus

characteristic: fertilizer regimen

text: France

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: experimental domain of Epoisses, burgundy region

characteristic: geographic location (region and locality)

text: Plantago lanceolata

characteristic: host common name

text: metagenome

characteristic: investigation type

text: root associated fungus metagenome

characteristic: organism

text: plant-associated

characteristic: plant-associated environmental package

text: Shift of AMF communities under short term agricultural practices.

characteristic: project name

text: root associated fungus metagenome

characteristic: sequencing method

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA DIJON

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: anthropogenic geographic feature

text: root

text: France

text: Plantago lanceolata

text: metagenome

text: root associated fungus metagenome

text: plant-associated

text: root associated fungus metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: INRA DIJON

text: public

text: terrestrial biome

text: anthropogenic geographic feature

characteristic: environment (feature)

text: root

characteristic: environment (material)

text: nitrogen

characteristic: fertilizer regimen

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: Plantago lanceolata

characteristic: host common name

text: metagenome

characteristic: investigation type

text: root associated fungus metagenome

text: soil physical disturbance by ploughing

characteristic: perturbation

text: plant-associated

text: root associated fungus metagenome


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA DIJON

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: terrestrial biome

text: anthropogenic geographic feature

text: root

text: nitrogen & phosphorus

text: France

text: Plantago lanceolata

text: metagenome

text: root associated fungus metagenome

characteristic: organism

text: soil physical disturbance by ploughing

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

text: root associated fungus metagenome

characteristic: sequencing method

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: INRA DIJON

text: public

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: anthropogenic geographic feature

characteristic: environment (feature)

text: root

characteristic: environment (material)

text: Phosphorus

characteristic: fertilizer regimen

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Plantago lanceolata

text: metagenome

text: root associated fungus metagenome

text: soil physical disturbance by ploughing

text: plant-associated

text: root associated fungus metagenome


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA DIJON

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: terrestrial biome

text: anthropogenic geographic feature

text: root

text: France

characteristic: geographic location (region and locality)

text: Plantago lanceolata

characteristic: host common name

text: metagenome

characteristic: investigation type

text: root associated fungus metagenome

characteristic: organism

text: soil physical disturbance by ploughing

characteristic: perturbation

text: plant-associated

text: root associated fungus metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: MBL

text: public

characteristic: Submitter Id

characteristic: collection date

text: river

characteristic: environment (biome)

text: freshwater

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: USA

unit: m

characteristic: geographic location (depth)

text: metagenome

text: freshwater metagenome

text: Columbia River coastal margin 'omics

characteristic: project name

text: freshwater metagenome

text: Illumina, paired-end

characteristic: sequencing method

text: Metagenome of Columbia River, salinty 0

characteristic: title

text: water

characteristic: water environmental package


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MBL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: river

text: freshwater

text: water

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: freshwater metagenome

text: Columbia River coastal margin 'omics

text: freshwater metagenome

text: Illumina, paired-end

text: Metatranscriptome of Columbia River, salinty 0

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: MBL

text: public

characteristic: Submitter Id

characteristic: collection date

text: estuary

characteristic: environment (biome)

text: estuary

characteristic: environment (feature)

text: water

text: USA

text: metagenome

characteristic: investigation type

text: marine metagenome

characteristic: organism

text: Columbia River coastal margin 'omics

text: marine metagenome

text: Illumina, paired-end

text: Metagenome of Columbia River estuary, salinty 5

text: water


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MBL

text: public

text: estuary

text: estuary

text: water

characteristic: environment (material)

text: USA

characteristic: geographic location (depth)

text: metagenome

text: marine metagenome

text: Columbia River coastal margin 'omics

characteristic: project name

text: marine metagenome

text: Illumina, paired-end

characteristic: sequencing method

text: Metatranscriptome of Columbia River estuary, salinty 5

characteristic: title

text: water

characteristic: water environmental package


text: MBL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: marine

text: river plume

text: water

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: marine metagenome

text: Columbia River coastal margin 'omics

text: marine metagenome

text: Illumina, paired-end

text: Metagenome of Columbia River plume, salinty 15

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: MBL

text: public

characteristic: Submitter Id

characteristic: collection date

text: marine

characteristic: environment (biome)

text: river plume

characteristic: environment (feature)

text: water

text: USA

text: metagenome

characteristic: investigation type

text: marine metagenome

characteristic: organism

text: Columbia River coastal margin 'omics

text: marine metagenome

text: Illumina, paired-end

text: Metatranscriptome of Columbia River, salinty 15

text: water


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MBL

text: public

text: marine

text: river plume

text: water

characteristic: environment (material)

text: USA

characteristic: geographic location (depth)

text: metagenome

text: marine metagenome

text: Columbia River coastal margin 'omics

characteristic: project name

text: marine metagenome

text: Illumina, paired-end

characteristic: sequencing method

text: Metagenome of Columbia River plume, salinty 25

characteristic: title

text: water

characteristic: water environmental package


text: MBL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: marine

text: river plume

text: water

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: marine metagenome

text: Columbia River coastal margin 'omics

text: marine metagenome

text: Illumina, paired-end

text: Metatranscriptome of Columbia River plume, salinty 25

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: MBL

text: public

characteristic: Submitter Id

characteristic: collection date

text: marine

characteristic: environment (biome)

text: coastal ocean

characteristic: environment (feature)

text: water

text: USA

text: metagenome

characteristic: investigation type

text: marine metagenome

characteristic: organism

text: Columbia River coastal margin 'omics

text: marine metagenome

text: Illumina, paired-end

text: Metagenome of Columbia River coastal margin, salinty 33

text: water


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MBL

text: public

text: marine

text: coastal ocean

text: water

characteristic: environment (material)

text: USA

characteristic: geographic location (depth)

text: metagenome

text: marine metagenome

text: Columbia River coastal margin 'omics

characteristic: project name

text: marine metagenome

text: Illumina, paired-end

characteristic: sequencing method

text: Metatranscriptome of Columbia River coastal margin, salinty 33

characteristic: title

text: water

characteristic: water environmental package


text: LSHTM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Diseased

characteristic: host health state

text: Rattus

characteristic: host scientific name

text: blood

characteristic: isolation source

text: Escherichia coli

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: E. coli A192PP


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LSHTM

text: public

characteristic: Submitter Id

characteristic: collection date

text: United Kingdom

text: diseased

text: Rattus

text: blood

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: E. coli A192PP contigs


Coccomyxa sp. Carn with arsenic

text: Alexandre

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Coccomyxa sp. Carn with arsenic

text: Coccomyxa sp. Carn with arsenic

characteristic: description

text: river

characteristic: environment (biome)

text: Acid mine drainage

characteristic: environment (feature)

text: sediment and water

characteristic: environment (material)

text: France

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: Coccomyxa sp. Carn

text: TDCAA

characteristic: project name

text: Coccomyxa sp. Carn

text: Illumina

characteristic: sequencing method

text: Coccomyxa sp. Carn with arsenic

characteristic: title

text: water

characteristic: water environmental package

type: has member


Coccomyxa sp. Carn without arsenic

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Alexandre

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Coccomyxa sp. Carn without arsenic

characteristic: Submitter Id

text: Coccomyxa sp. Carn without arsenic

text: river

text: Acid mine drainage

text: sediment and water

text: France

characteristic: geographic location (country and/or sea)

text: metagenome

text: Coccomyxa sp. Carn

text: TDCAA

text: Coccomyxa sp. Carn

text: Illumina

text: Coccomyxa sp. Carn without arsenic

text: water


text: Department of Biosecurity PCL3

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:Department of Biosecurity PCL3

characteristic: collection date

text: Strain neonatal pulsotype NRCS-A Methicillin-resistant

characteristic: description

text: Australia

text: genomic DNA

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: skin of human

characteristic: isolation source

text: Staphylococcus capitis

characteristic: organism

text: Staphylococcus capitis

characteristic: serovar

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Department of Biosecurity PCL3

text: public

text: wild strain

text: United Kingdom

text: Homo sapiens

text: skin of human

text: Staphylococcus capitis

text: Staphylococcus capitis

characteristic: title


characteristic: External Id

text: Department of Biosecurity PCL3

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: LOS 2002

text: France

text: Staphylococcus capitis

text: skin on human

text: Staphylococcus capitis

text: Staphylococcus capitis


text: Department of Biosecurity PCL3

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Strain neonatal pulsotype NRCS-A, Methicillin-resistant

text: Belgium

characteristic: geographic location (country and/or sea)

text: genomic DNA

text: Homo sapiens

text: skin of human

text: Staphylococcus capitis

text: Staphylococcus capitis


text: ANAND

text: public

characteristic: collection date

text: cattle

characteristic: common name

characteristic: description

text: Rumen

characteristic: environment (biome)

text: livestock

characteristic: environment (feature)

text: rumen fluid

characteristic: environment (material)

text: India

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: Bos taurus

characteristic: project name

text: Bos taurus

text: Shotgun

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ANAND

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: host associated

text: Cecum

text: faecal

text: India

text: chicken

characteristic: host common name

text: Manufactured poultry feed

characteristic: host diet

characteristic: host subject id

characteristic: host taxid

text: host-associated

text: metagenome

text: metagenome

characteristic: organism

text: Pilot study

text: metagenome

text: Illumina

text: metagenome of poultry gut

characteristic: title


text: ANAND

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

characteristic: collection date

text: host associated

characteristic: environment (biome)

text: Cecum

characteristic: environment (feature)

text: fecal

characteristic: environment (material)

text: India

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: chicken

text: Manufactured poultry feed

text: host-associated

characteristic: host-associated environmental package

text: metagenome

text: metagenome

text: Pilot study

text: metagenome

text: Illumina

text: metagenome of poultry gut


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: WAGENINGEN UR

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Ecofinders_faunalbarcoding_Protozoans_run1_euk20F

tag: Namespace:WAGENINGEN UR

text: agricultural feature

text: field

text: soil

text: France

text: mimarks-survey

characteristic: investigation type

text: miscellaneous natural or artificial environment

characteristic: miscellaneous environmental package

text: ATCTC

characteristic: multiplex identifiers

text: uncultured eukaryote

text: EcoFINDERS faunal metabarcoding

characteristic: project name

text: uncultured eukaryote

text: 454 FLX pyrosequencing

characteristic: sequencing method


text: WAGENINGEN UR

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Ecofinders_faunalbarcoding_Protozoans_run1_Euk302r

characteristic: Submitter Id

characteristic: collection date

text: agricultural feature

characteristic: environment (biome)

text: field

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: France

text: mimarks-survey

text: ATCGC

text: uncultured eukaryote

characteristic: organism

text: EcoFINDERS faunal metabarcoding

text: uncultured eukaryote

text: 454 FLX pyrosequencing

characteristic: title


Dicathais orbita1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SOUTHERNCROSSPLANTSCIENCE

characteristic: INSDC last update

text: public

text: Dicathais orbita1

text: Dicathais orbita is a marine mollusc which is well known for the production of anticancer compounds that are precursors to Tyrian purple. This study aimed to assess the diversity and to identity bacteria associated with the Tyrian purple producing hypobranchial gland by comparison with foot tissues using a high-throughput sequencing approach. Total DNA was extracted from the hypobranchial gland and foot of D. orbita followed by high-throughput sequence, QIIME and MEGAN analysis of variable region V1-V3 of 16S rRNA bacterial gene amplicons. Metagenome analysis revealed a highly diverse bacterial assemblage associated with the hypobranchial gland and foot tissues of D. orbita. The dominant bacterial phylum in the metagenome data set was Proteobacteria followed by Tenericutes, Spirochaetes and Bacteroidetes. Larger numbers of bacterial taxa were present in the foot than the hypobranchial gland of D. orbita. This study revealed the high abundance of Vibrio spp. and the presence of unique bacterial communities in the hypobranchial gland which is also the site of indole production, bromoperoxidase activity and brominated secondary metabolites. This study also revealed the diversity of bacteria associated with the Tyrian Purple producing gland of a marine muricid and suggests bacteria have a potential role in the biosynthesis of Tyrian purple.

characteristic: description

text: coastal

text: Intertidal rocky areas

text: water

text: Australia

characteristic: geographic location (country and/or sea)

text: 28 84

characteristic: geographic location (latitude)

text: 153 60

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

text: Dicathais orbita

text: Metagenomic profiling of Dicathais orbita

text: Dicathais orbita

text: Roche 454

text: Metagenomic profiling of bacterial communities associated with Tyrian Purple production in a marine gastropod


text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:UNIVERSITY OF BRITISH COLUMBIA

characteristic: Submitter Id

characteristic: carbon isotope label

characteristic: depth

text: soil samples for fungal pyrotag sequencing

text: forest

text: forest

text: soil

text: USA

characteristic: geographic location (elevation)

text: A horizon

characteristic: horizon

text: mimarks-survey

characteristic: investigation type

characteristic: ltsp treatment

text: TACACACACT

characteristic: multiplex identifiers

text: uncultured soil fungus

text: GACGCTTCTCCAGACTACAAT, TCCTCCGCTTATTGATATGC

characteristic: pcr primers

text: Metagenomic and metatranscriptomic analysis of forest soil communities across North America

characteristic: project name

characteristic: replicate

unit: g

characteristic: sample weight for DNA extraction

text: uncultured soil fungus

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: rRNA intergenic spacer analysis

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

characteristic: description

text: forest

characteristic: environment (biome)

text: forest

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: O horizon

text: mimarks-survey

text: ACGCGAGTAT

text: uncultured soil fungus

characteristic: organism

text: uncultured soil fungus

text: soil

text: rRNA intergenic spacer analysis

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF BRITISH COLUMBIA

text: public

characteristic: Submitter Id

characteristic: carbon isotope label

characteristic: depth

text: forest

text: forest

text: soil

text: Canada

characteristic: geographic location (elevation)

text: A horizon

characteristic: horizon

text: mimarks-survey

characteristic: investigation type

characteristic: ltsp treatment

text: CACGCTACGT

characteristic: multiplex identifiers

text: uncultured soil fungus

characteristic: pcr primers

characteristic: project name

characteristic: replicate

characteristic: sample weight for DNA extraction

text: uncultured soil fungus

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: rRNA intergenic spacer analysis

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

characteristic: description

text: forest

characteristic: environment (biome)

text: forest

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: A horizon

text: mimarks-survey

text: CTCGCGTGTC

text: uncultured soil fungus

characteristic: organism

text: uncultured soil fungus

text: soil

text: rRNA intergenic spacer analysis

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF BRITISH COLUMBIA

text: public

characteristic: Submitter Id

characteristic: carbon isotope label

characteristic: depth

text: forest

text: forest

text: soil

text: USA

characteristic: geographic location (elevation)

text: O horizon

characteristic: horizon

text: mimarks-survey

characteristic: investigation type

characteristic: ltsp treatment

text: TCTATACTAT

characteristic: multiplex identifiers

text: uncultured soil fungus

characteristic: pcr primers

characteristic: project name

characteristic: replicate

characteristic: sample weight for DNA extraction

text: uncultured soil fungus

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: rRNA intergenic spacer analysis

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

characteristic: description

text: forest

characteristic: environment (biome)

text: forest

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: O horizon

text: mimarks-survey

text: TGTGAGTAGT

text: uncultured soil fungus

characteristic: organism

text: uncultured soil fungus

text: soil

text: rRNA intergenic spacer analysis

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF BRITISH COLUMBIA

text: public

characteristic: Submitter Id

characteristic: carbon isotope label

characteristic: depth

text: forest

text: forest

text: soil

text: USA

characteristic: geographic location (elevation)

text: O horizon

characteristic: horizon

text: mimarks-survey

characteristic: investigation type

characteristic: ltsp treatment

text: ACGCGATCGA

characteristic: multiplex identifiers

text: uncultured soil fungus

characteristic: pcr primers

characteristic: project name

characteristic: replicate

characteristic: sample weight for DNA extraction

text: uncultured soil fungus

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: rRNA intergenic spacer analysis

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

characteristic: description

text: forest

characteristic: environment (biome)

text: forest

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: O horizon

text: mimarks-survey

text: CGAGAGATAC

text: uncultured soil fungus

characteristic: organism

text: uncultured soil fungus

text: soil

text: rRNA intergenic spacer analysis

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF BRITISH COLUMBIA

text: public

characteristic: Submitter Id

characteristic: carbon isotope label

characteristic: depth

text: forest

text: forest

text: soil

text: USA

characteristic: geographic location (elevation)

text: O horizon

characteristic: horizon

text: mimarks-survey

characteristic: investigation type

characteristic: ltsp treatment

text: ACTACTATGT

characteristic: multiplex identifiers

text: uncultured soil fungus

characteristic: pcr primers

characteristic: project name

characteristic: replicate

characteristic: sample weight for DNA extraction

text: uncultured soil fungus

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: rRNA intergenic spacer analysis

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

characteristic: description

text: forest

characteristic: environment (biome)

text: forest

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: O horizon

text: mimarks-survey

text: AGTACGCTAT

text: uncultured soil fungus

characteristic: organism

text: uncultured soil fungus

text: soil

text: rRNA intergenic spacer analysis

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF BRITISH COLUMBIA

text: public

characteristic: Submitter Id

characteristic: carbon isotope label

characteristic: depth

text: forest

text: forest

text: soil

text: Canada

characteristic: geographic location (elevation)

text: O horizon

characteristic: horizon

text: mimarks-survey

characteristic: investigation type

characteristic: ltsp treatment

text: ATATCGCGAG

characteristic: multiplex identifiers

text: uncultured soil fungus

characteristic: pcr primers

characteristic: project name

characteristic: replicate

characteristic: sample weight for DNA extraction

text: uncultured soil fungus

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: rRNA intergenic spacer analysis

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

characteristic: description

text: forest

characteristic: environment (biome)

text: forest

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: A horizon

text: mimarks-survey

text: TACACGTGAT

text: uncultured soil fungus

characteristic: organism

text: uncultured soil fungus

text: soil

text: rRNA intergenic spacer analysis

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF BRITISH COLUMBIA

text: public

characteristic: Submitter Id

characteristic: carbon isotope label

characteristic: depth

text: forest

text: forest

text: soil

text: USA

characteristic: geographic location (elevation)

text: A horizon

characteristic: horizon

text: mimarks-survey

characteristic: investigation type

characteristic: ltsp treatment

text: ATAGAGTACT

characteristic: multiplex identifiers

text: uncultured soil fungus

characteristic: pcr primers

characteristic: project name

characteristic: replicate

characteristic: sample weight for DNA extraction

text: uncultured soil fungus

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: rRNA intergenic spacer analysis

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

characteristic: description

text: forest

characteristic: environment (biome)

text: forest

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: A horizon

text: mimarks-survey

text: AGCACTGTAG

text: uncultured soil fungus

characteristic: organism

text: uncultured soil fungus

text: soil

text: rRNA intergenic spacer analysis

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF BRITISH COLUMBIA

text: public

characteristic: Submitter Id

characteristic: carbon isotope label

characteristic: depth

text: forest

text: forest

text: soil

text: USA

characteristic: geographic location (elevation)

text: O horizon

characteristic: horizon

text: mimarks-survey

characteristic: investigation type

characteristic: ltsp treatment

text: CGACGTGACT

characteristic: multiplex identifiers

text: uncultured soil fungus

characteristic: pcr primers

characteristic: project name

characteristic: replicate

characteristic: sample weight for DNA extraction

text: uncultured soil fungus

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: rRNA intergenic spacer analysis

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

characteristic: description

text: forest

characteristic: environment (biome)

text: forest

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: O horizon

text: mimarks-survey

text: ACTGTACAGT

text: uncultured soil fungus

characteristic: organism

text: uncultured soil fungus

text: soil

text: rRNA intergenic spacer analysis

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF BRITISH COLUMBIA

text: public

characteristic: Submitter Id

characteristic: carbon isotope label

characteristic: depth

text: forest

text: forest

text: soil

text: Canada

characteristic: geographic location (elevation)

text: O horizon

characteristic: horizon

text: mimarks-survey

characteristic: investigation type

characteristic: ltsp treatment

text: TCTACGTAGC

characteristic: multiplex identifiers

text: uncultured soil fungus

characteristic: pcr primers

characteristic: project name

characteristic: replicate

characteristic: sample weight for DNA extraction

text: uncultured soil fungus

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: rRNA intergenic spacer analysis

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

characteristic: description

text: forest

characteristic: environment (biome)

text: forest

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: O horizon

text: mimarks-survey

text: ACGCTCGACA

text: uncultured soil fungus

characteristic: organism

text: uncultured soil fungus

text: soil

text: rRNA intergenic spacer analysis

characteristic: title


Se1691 mucoid

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: ANIMAL HEALTH TRUST

text: public

text: Se1691 mucoid

tag: Namespace:ANIMAL HEALTH TRUST

characteristic: Submitter Id

text: Streptococcus equi strain 1691

text: UK

text: Diseased

characteristic: host health state

text: Horse

characteristic: host scientific name

text: Nasal discharge

characteristic: isolation source

text: Streptococcus equi subsp. equi

text: Streptococcus equi subsp. equi

text: subspecies equi

characteristic: serovar

text: Streptococcus equi

characteristic: strain

text: Se1691 mucoid


Se1691 reduced capsule

characteristic: External Id

text: ANIMAL HEALTH TRUST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Se1691 reduced capsule

characteristic: collection date

text: Streptococcus equi strain 1691

characteristic: description

text: UK

text: Diseased

text: Horse

text: Nasal discharge

text: Streptococcus equi subsp. equi

text: Streptococcus equi subsp. equi

text: subspecies equi

text: Streptococcus equi

text: Se1691 reduced capsule


characteristic: ENA-CHECKLIST

text: DUKE UNIVERSITY MEDICAL CENTER

text: public

tag: Namespace:DUKE UNIVERSITY MEDICAL CENTER

text: ENVO:urban biome

characteristic: environment (biome)

text: ENVO:human-associated habitat

characteristic: environment (feature)

text: ENVO:feces

characteristic: environment (material)

text: Bangladesh

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

text: mimarks-survey

characteristic: investigation type

text: human gut metagenome

characteristic: organism

characteristic: project name

text: human gut metagenome

text: Illumina

characteristic: sequencing method

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DUKE UNIVERSITY MEDICAL CENTER

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: ENVO:urban biome

text: ENVO:human-associated habitat

text: ENVO:feces

text: Bangladesh

text: human-gut

text: metagenome

text: human gut metagenome

text: human gut metagenome

text: Illumina


characteristic: ENA-CHECKLIST

text: Marine Biological Laboratory

text: public

characteristic: SRA accession

tag: Namespace:Marine Biological Laboratory

characteristic: collection date

text: Ginger Castle, Von Damm

characteristic: description

text: marine hydrothermal vent

characteristic: environment (biome)

text: marine hydrothermal vent

characteristic: environment (feature)

text: sea water

characteristic: environment (material)

text: Cayman Islands

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

text: metagenome

text: hydrothermal vent metagenome

text: Cayman

text: hydrothermal vent metagenome

text: Illumina

text: water

characteristic: water environmental package


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Marine Biological Laboratory

text: public

text: Shrimp Gulley #2, Piccard

text: marine hydrothermal vent

text: marine hydrothermal vent

text: sea water

text: Cayman Islands

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: hydrothermal vent metagenome

characteristic: organism

text: Cayman

characteristic: project name

text: hydrothermal vent metagenome

text: Illumina

characteristic: sequencing method

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: UK

text: Diseased

characteristic: host health state

text: Human

characteristic: host scientific name

text: Sputum

characteristic: isolation source

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: MTB

characteristic: serovar

text: MTB

characteristic: strain


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: ETH

text: public

text: grassland

characteristic: current land use

characteristic: depth

text: We assessed the effects of soil pH and P fertilization on the phoD gene and transcript in a long-term grassland trial characterized by a natural pH gradient and identified the key bacteria that express and carry the phoD alkaline phosphatase gene using 454-sequencing.

characteristic: description

text: Grassland soil

characteristic: environment (biome)

text: Rich grassland

characteristic: environment (feature)

text: 2g soil

characteristic: environment (material)

text: Switzerland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: RNA Powersoil® Total RNA isolation kit, MoBio

characteristic: nucleic acid extraction

text: soil metagenome

characteristic: organism

text: phoD-F733 5'-TGGGAYGATCAYGARGT-3' / phoD-R1083 5'-CTGSGCSAKSACRTTCCA-3'

characteristic: pcr primers

characteristic: ph

text: phoD alkaline phosphatase in a swiss lowland grassland

characteristic: project name

text: soil metagenome

text: soil

characteristic: soil environmental package

text: Cambisol

characteristic: soil taxonomic/fao classification

text: Cambisol

characteristic: soil type

text: phoD alkaline phosphatase

characteristic: target gene

text: phoD alkaline phosphatase in a grassland


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Ryukyu mouse

characteristic: common name

text: these pair-end libraries are 180bp overlapping libraries in order to be consistant with ALLPATH-LG specification

characteristic: description

text: Mus caroli

text: Mus caroli

text: Female

characteristic: sex

text: 180bp overlapping pair-end librairy

characteristic: title


text: EBI

text: public

text: Ryukyu mouse

text: 3Kb mate-pair libraries

text: Mus caroli

characteristic: organism

text: Mus caroli

text: Female

text: 3Kb mate-pair libraries


text: EBI

text: public

text: shrew mouse

text: Mus pahari

text: Mus pahari

text: Female

text: Tail

characteristic: tissue type

text: 180bp overlapping pair-end librairy


text: EBI

text: public

text: shrew mouse

text: 3Kb mate-pair libraries

text: Mus pahari

text: Mus pahari

text: Female

text: tail

text: 3Kb mate-pair libraries


text: UNIVERSITY OF CALIFORNIA - SAN DIEGO

text: public

tag: Namespace:UNIVERSITY OF CALIFORNIA - SAN DIEGO

text: RAST

characteristic: annotation source

characteristic: collection date

text: Note these are single-cell genomes from seawater, not metagenomes as listed in the investigation type.

text: marine pelagic biome

characteristic: environment (biome)

text: surface layer

characteristic: environment (feature)

text: sea water

characteristic: environment (material)

text: Saudi Arabia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Red Sea

characteristic: geographic location (region and locality)

text: metagenome

characteristic: investigation type

text: Candidatus Pelagibacter ubique

characteristic: project name

text: Candidatus Pelagibacter ubique

text: Illumina HiSeq

characteristic: sequencing method

text: SCGC AAA795-A08

characteristic: strain

text: Subclade Ia

characteristic: subspecific genetic lineage

text: Single-cell amplified genome (SAG) from surface water of the Red Sea.

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF CALIFORNIA - SAN DIEGO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: RAST

characteristic: description

text: marine pelagic biome

text: surface layer

text: sea water

text: Saudi Arabia

text: Red Sea

text: metagenome

text: Candidatus Pelagibacter ubique

characteristic: organism

text: Candidatus Pelagibacter ubique

text: Illumina HiSeq

text: SCGC AAA795-A20

text: Subclade Ia

characteristic: title

text: water


text: UNIVERSITY OF CALIFORNIA - SAN DIEGO

text: public

text: RAST

characteristic: annotation source

characteristic: collection date

text: marine pelagic biome

characteristic: environment (biome)

text: surface layer

characteristic: environment (feature)

text: sea water

characteristic: environment (material)

text: Saudi Arabia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Red Sea

characteristic: geographic location (region and locality)

text: metagenome

characteristic: investigation type

text: Candidatus Pelagibacter ubique

characteristic: project name

text: Candidatus Pelagibacter ubique

text: Illumina HiSeq

characteristic: sequencing method

text: SCGC AAA795-B16

text: Subclade Ib

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF CALIFORNIA - SAN DIEGO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: RAST

text: marine pelagic biome

text: surface layer

text: sea water

text: Saudi Arabia

text: Red Sea

text: metagenome

text: Candidatus Pelagibacter ubique

text: Candidatus Pelagibacter ubique

text: Illumina HiSeq

text: SCGC AAA795-C09

characteristic: strain

text: Subclade Ia

characteristic: subspecific genetic lineage

text: water

characteristic: water environmental package


text: UNIVERSITY OF CALIFORNIA - SAN DIEGO

text: public

text: RAST

characteristic: annotation source

characteristic: collection date

characteristic: description

text: marine pelagic biome

characteristic: environment (biome)

text: surface layer

characteristic: environment (feature)

text: sea water

characteristic: environment (material)

text: Saudi Arabia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Red Sea

characteristic: geographic location (region and locality)

text: metagenome

text: Candidatus Pelagibacter ubique

characteristic: organism

text: Candidatus Pelagibacter ubique

text: Illumina HiSeq

text: SCGC AAA795-C10

text: Subclade Ia

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF CALIFORNIA - SAN DIEGO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: RAST

text: marine pelagic biome

text: surface layer

text: sea water

text: Saudi Arabia

text: Red Sea

text: metagenome

characteristic: investigation type

text: Candidatus Pelagibacter ubique

characteristic: project name

text: Candidatus Pelagibacter ubique

text: Illumina HiSeq

characteristic: sequencing method

text: SCGC AAA795-D22

text: Subclade Ia

text: water


text: UNIVERSITY OF CALIFORNIA - SAN DIEGO

text: public

text: RAST

characteristic: annotation source

characteristic: collection date

characteristic: description

text: marine pelagic biome

characteristic: environment (biome)

text: surface layer

characteristic: environment (feature)

text: sea water

characteristic: environment (material)

text: Saudi Arabia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Red Sea

text: metagenome

text: Candidatus Pelagibacter ubique

text: Candidatus Pelagibacter ubique

text: Illumina HiSeq

text: SCGC AAA795-E07

characteristic: strain

text: Subclade II

characteristic: subspecific genetic lineage

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF CALIFORNIA - SAN DIEGO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: RAST

text: marine pelagic biome

text: surface layer

text: sea water

text: Saudi Arabia

text: Red Sea

characteristic: geographic location (region and locality)

text: metagenome

text: Candidatus Pelagibacter ubique

characteristic: organism

text: Candidatus Pelagibacter ubique

text: Illumina HiSeq

text: SCGC AAA795-E22

text: Subclade Ib

characteristic: title

text: water


text: UNIVERSITY OF CALIFORNIA - SAN DIEGO

text: public

text: RAST

characteristic: annotation source

characteristic: collection date

characteristic: description

text: marine pelagic biome

characteristic: environment (biome)

text: surface layer

characteristic: environment (feature)

text: sea water

characteristic: environment (material)

text: Saudi Arabia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Red Sea

text: metagenome

characteristic: investigation type

text: Candidatus Pelagibacter ubique

characteristic: project name

text: Candidatus Pelagibacter ubique

text: Illumina HiSeq

characteristic: sequencing method

text: SCGC AAA795-F16

text: Subclade Ib

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF CALIFORNIA - SAN DIEGO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: RAST

text: marine pelagic biome

text: surface layer

text: sea water

text: Saudi Arabia

text: Red Sea

text: metagenome

text: Candidatus Pelagibacter ubique

text: Candidatus Pelagibacter ubique

text: Illumina HiSeq

text: SCGC AAA795-G15

characteristic: strain

text: Subclade II

characteristic: subspecific genetic lineage

text: water

characteristic: water environmental package


text: UNIVERSITY OF CALIFORNIA - SAN DIEGO

text: public

text: RAST

characteristic: annotation source

characteristic: collection date

characteristic: description

text: marine pelagic biome

characteristic: environment (biome)

text: surface layer

characteristic: environment (feature)

text: sea water

characteristic: environment (material)

text: Saudi Arabia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Red Sea

characteristic: geographic location (region and locality)

text: metagenome

text: Candidatus Pelagibacter ubique

characteristic: organism

text: Candidatus Pelagibacter ubique

text: Illumina HiSeq

text: SCGC AAA795-J21

text: Subclade Ia

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF CALIFORNIA - SAN DIEGO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: RAST

text: marine pelagic biome

text: surface layer

text: sea water

text: Saudi Arabia

text: Red Sea

text: metagenome

characteristic: investigation type

text: Candidatus Pelagibacter ubique

characteristic: project name

text: Candidatus Pelagibacter ubique

text: Illumina HiSeq

characteristic: sequencing method

text: SCGC AAA795-K18

text: Subclade Ia

text: water


text: UNIVERSITY OF CALIFORNIA - SAN DIEGO

text: public

text: RAST

characteristic: annotation source

characteristic: collection date

characteristic: description

text: marine pelagic biome

characteristic: environment (biome)

text: surface layer

characteristic: environment (feature)

text: sea water

characteristic: environment (material)

text: Saudi Arabia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Red Sea

text: metagenome

text: Candidatus Pelagibacter ubique

text: Candidatus Pelagibacter ubique

text: Illumina HiSeq

text: SCGC AAA795-L23

characteristic: strain

text: Subclade Ia

characteristic: subspecific genetic lineage

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF CALIFORNIA - SAN DIEGO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: RAST

text: marine pelagic biome

text: surface layer

text: sea water

text: Saudi Arabia

text: Red Sea

characteristic: geographic location (region and locality)

text: metagenome

text: Candidatus Pelagibacter ubique

characteristic: organism

text: Candidatus Pelagibacter ubique

text: Illumina HiSeq

text: SCGC AAA795-M18

text: Subclade Ib

characteristic: title

text: water


text: UNIVERSITY OF CALIFORNIA - SAN DIEGO

text: public

text: RAST

characteristic: annotation source

characteristic: collection date

characteristic: description

text: marine pelagic biome

characteristic: environment (biome)

text: surface layer

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text: sea water

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text: Saudi Arabia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Red Sea

text: metagenome

characteristic: investigation type

text: Candidatus Pelagibacter ubique

characteristic: project name

text: Candidatus Pelagibacter ubique

text: Illumina HiSeq

characteristic: sequencing method

text: SCGC AAA795-M22

text: Subclade Ib

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characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF CALIFORNIA - SAN DIEGO

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: RAST

text: marine pelagic biome

text: surface layer

text: sea water

text: Saudi Arabia

text: Red Sea

text: metagenome

text: Candidatus Pelagibacter ubique

text: Candidatus Pelagibacter ubique

text: Illumina HiSeq

text: SCGC AAA795-N08

characteristic: strain

text: Subclade Ia

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text: water

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text: UNIVERSITY OF CALIFORNIA - SAN DIEGO

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text: RAST

characteristic: annotation source

characteristic: collection date

characteristic: description

text: marine pelagic biome

characteristic: environment (biome)

text: surface layer

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text: sea water

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text: Saudi Arabia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Red Sea

characteristic: geographic location (region and locality)

text: metagenome

text: Candidatus Pelagibacter ubique

characteristic: organism

text: Candidatus Pelagibacter ubique

text: Illumina HiSeq

text: SCGC AAA795-N17

text: Subclade II

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF CALIFORNIA - SAN DIEGO

characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: RAST

text: marine pelagic biome

text: surface layer

text: sea water

text: Saudi Arabia

text: Red Sea

text: metagenome

characteristic: investigation type

text: Candidatus Pelagibacter ubique

characteristic: project name

text: Candidatus Pelagibacter ubique

text: Illumina HiSeq

characteristic: sequencing method

text: SCGC AAA795-O19

text: Subclade Ia

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text: UNIVERSITY OF CALIFORNIA - SAN DIEGO

text: public

text: RAST

characteristic: annotation source

characteristic: collection date

characteristic: description

text: marine pelagic biome

characteristic: environment (biome)

text: surface layer

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text: sea water

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text: Saudi Arabia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Red Sea

text: metagenome

text: Candidatus Pelagibacter ubique

text: Candidatus Pelagibacter ubique

text: Illumina HiSeq

text: SCGC AAA795-O20

characteristic: strain

text: Subclade Ia

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text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF CALIFORNIA - SAN DIEGO

characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: RAST

text: marine pelagic biome

text: surface layer

text: sea water

text: Saudi Arabia

text: Red Sea

characteristic: geographic location (region and locality)

text: metagenome

text: Candidatus Pelagibacter ubique

characteristic: organism

text: Candidatus Pelagibacter ubique

text: Illumina HiSeq

text: SCGC AAA795-P11

text: Subclade Ia

characteristic: title

text: water


text: UNIVERSITY OF CALIFORNIA - SAN DIEGO

text: public

text: RAST

characteristic: annotation source

characteristic: collection date

characteristic: description

text: marine pelagic biome

characteristic: environment (biome)

text: surface layer

characteristic: environment (feature)

text: sea water

characteristic: environment (material)

text: Saudi Arabia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Red Sea

text: metagenome

characteristic: investigation type

text: Candidatus Pelagibacter ubique

characteristic: project name

text: Candidatus Pelagibacter ubique

text: Illumina HiSeq

characteristic: sequencing method

text: SCGC AAA797-I19

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characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF CALIFORNIA - SAN DIEGO

characteristic: INSDC center name

characteristic: INSDC first public

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: RAST

text: marine pelagic biome

text: surface layer

text: sea water

text: Saudi Arabia

text: Red Sea

text: metagenome

text: Prochlorococcus marinus

text: Prochlorococcus marinus

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text: SCGC AAA795-F05

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text: Ecotype HL II

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text: water

characteristic: water environmental package


text: UNIVERSITY OF CALIFORNIA - SAN DIEGO

text: public

text: RAST

characteristic: annotation source

characteristic: collection date

characteristic: description

text: marine pelagic biome

characteristic: environment (biome)

text: surface layer

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text: sea water

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text: Saudi Arabia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Red Sea

characteristic: geographic location (region and locality)

text: metagenome

text: Prochlorococcus marinus

characteristic: organism

text: Prochlorococcus marinus

text: Illumina HiSeq

text: SCGC AAA795-I06

text: Ecotype HL II

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF CALIFORNIA - SAN DIEGO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: RAST

text: marine pelagic biome

text: surface layer

text: sea water

text: Saudi Arabia

text: Red Sea

text: metagenome

characteristic: investigation type

text: Prochlorococcus marinus

characteristic: project name

text: Prochlorococcus marinus

text: Illumina HiSeq

characteristic: sequencing method

text: SCGC AAA795-I15

text: Ecotype HL II

text: water


text: UNIVERSITY OF CALIFORNIA - SAN DIEGO

text: public

text: RAST

characteristic: annotation source

characteristic: collection date

characteristic: description

text: marine pelagic biome

characteristic: environment (biome)

text: surface layer

characteristic: environment (feature)

text: sea water

characteristic: environment (material)

text: Saudi Arabia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Red Sea

text: metagenome

text: Prochlorococcus marinus

text: Prochlorococcus marinus

text: Illumina HiSeq

text: SCGC AAA795-J16

characteristic: strain

text: Ecotype HL II

characteristic: subspecific genetic lineage

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF CALIFORNIA - SAN DIEGO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: RAST

text: marine pelagic biome

text: surface layer

text: sea water

text: Saudi Arabia

text: Red Sea

characteristic: geographic location (region and locality)

text: metagenome

text: Prochlorococcus marinus

characteristic: organism

text: Prochlorococcus marinus

text: Illumina HiSeq

text: SCGC AAA795-M23

text: Ecotype HL II

characteristic: title

text: water


text: UNIVERSITY OF CALIFORNIA - SAN DIEGO

text: public

characteristic: collection date

text: marine pelagic biome

characteristic: environment (biome)

text: harbor

characteristic: environment (feature)

text: sea water

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: Vibrio fischeri ES114

characteristic: project name

text: Vibrio fischeri ES114

text: Illumina HiSeq & MiSeq

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:Helmholtz Centre for Environmental Research

characteristic: depth

text: 0 day leaflitter replicate 1

characteristic: description

text: temperate broadleaf forest

text: beech forest

text: soil

text: Germany

characteristic: geographic location (elevation)

text: mimarks-survey

text: CAATGTTC

characteristic: multiplex identifiers

text: uncultured soil fungus

text: TCCTCCGCTTATTGATATGC CTTGGTCATTTAGAGGAAGTAA

characteristic: pcr primers

text: Microbial communities during litter decomposition

text: litter bag

characteristic: sample collection device or method

characteristic: sample weight for DNA extraction

text: uncultured soil fungus

text: pyrosequencing

text: soil

characteristic: soil environmental package

text: Luvisol

characteristic: soil type


characteristic: ENA-CHECKLIST

text: Helmholtz Centre for Environmental Research

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: 0 day leaflitter replicate 2

text: temperate broadleaf forest

characteristic: environment (biome)

text: beech forest

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: TAGAATGG

text: uncultured soil fungus

characteristic: organism

characteristic: project name

text: litter bag

text: uncultured soil fungus

text: pyrosequencing

characteristic: sequencing method

text: soil

text: Luvisol

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: depth

text: 0 day leaflitter replicate 3

characteristic: description

text: temperate broadleaf forest

text: beech forest

text: soil

text: Germany

characteristic: geographic location (elevation)

text: mimarks-survey

text: CCGCGTAA

characteristic: multiplex identifiers

text: uncultured soil fungus

characteristic: pcr primers

text: litter bag

characteristic: sample collection device or method

characteristic: sample weight for DNA extraction

text: uncultured soil fungus

text: pyrosequencing

text: soil

characteristic: soil environmental package

text: Luvisol


characteristic: ENA-CHECKLIST

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: 89 days leaflitter replicate 1

text: temperate broadleaf forest

characteristic: environment (biome)

text: beech forest

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: CGTAACAC

text: uncultured soil fungus

characteristic: organism

characteristic: project name

text: litter bag

text: uncultured soil fungus

text: pyrosequencing

characteristic: sequencing method

text: soil

text: Luvisol

characteristic: soil type


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: depth

text: 89 days leaflitter replicate 2

characteristic: description

text: temperate broadleaf forest

text: beech forest

text: soil

text: Germany

characteristic: geographic location (elevation)

text: mimarks-survey

text: CCAGGCAG

characteristic: multiplex identifiers

text: uncultured soil fungus

characteristic: pcr primers

text: litter bag

characteristic: sample collection device or method

characteristic: sample weight for DNA extraction

text: uncultured soil fungus

text: pyrosequencing

text: soil

text: Luvisol

characteristic: title


characteristic: ENA-CHECKLIST

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: 89 days leaflitter replicate 3

text: temperate broadleaf forest

characteristic: environment (biome)

text: beech forest

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: ACCAACGC

text: uncultured soil fungus

characteristic: organism

characteristic: project name

text: litter bag

text: uncultured soil fungus

text: pyrosequencing

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: Luvisol


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: depth

text: 180 days leaflitter replicate 1

characteristic: description

text: temperate broadleaf forest

text: beech forest

text: soil

text: Germany

characteristic: geographic location (elevation)

text: mimarks-survey

text: TCCATGGC

characteristic: multiplex identifiers

text: uncultured soil fungus

characteristic: pcr primers

text: litter bag

characteristic: sample collection device or method

characteristic: sample weight for DNA extraction

text: uncultured soil fungus

text: pyrosequencing

text: soil

text: Luvisol

characteristic: soil type


characteristic: ENA-CHECKLIST

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: 180 days leaflitter replicate 2

text: temperate broadleaf forest

characteristic: environment (biome)

text: beech forest

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: ACCGTCGC

text: uncultured soil fungus

characteristic: organism

characteristic: project name

text: litter bag

text: uncultured soil fungus

text: pyrosequencing

characteristic: sequencing method

text: soil

text: Luvisol

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: depth

text: 180 days leaflitter replicate 3

characteristic: description

text: temperate broadleaf forest

text: beech forest

text: soil

text: Germany

characteristic: geographic location (elevation)

text: mimarks-survey

text: CCACCTAC

characteristic: multiplex identifiers

text: uncultured soil fungus

characteristic: pcr primers

text: litter bag

characteristic: sample collection device or method

characteristic: sample weight for DNA extraction

text: uncultured soil fungus

text: pyrosequencing

text: soil

characteristic: soil environmental package

text: Luvisol


characteristic: ENA-CHECKLIST

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: 284 days leaflitter replicate 1

text: temperate broadleaf forest

characteristic: environment (biome)

text: beech forest

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: ACCGCGCA

text: uncultured soil fungus

characteristic: organism

characteristic: project name

text: litter bag

text: uncultured soil fungus

text: pyrosequencing

characteristic: sequencing method

text: soil

text: Luvisol

characteristic: soil type


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: depth

text: 284 days leaflitter replicate 2

characteristic: description

text: temperate broadleaf forest

text: beech forest

text: soil

text: Germany

characteristic: geographic location (elevation)

text: mimarks-survey

text: AGGACGCC

characteristic: multiplex identifiers

text: uncultured soil fungus

characteristic: pcr primers

text: litter bag

characteristic: sample collection device or method

characteristic: sample weight for DNA extraction

text: uncultured soil fungus

text: pyrosequencing

text: soil

text: Luvisol

characteristic: title


characteristic: ENA-CHECKLIST

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: 284 days leaflitter replicate 3

text: temperate broadleaf forest

characteristic: environment (biome)

text: beech forest

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: TGGCCAGC

text: uncultured soil fungus

characteristic: organism

characteristic: project name

text: litter bag

text: uncultured soil fungus

text: pyrosequencing

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: Luvisol


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: depth

text: 362 days leaflitter replicate 1

characteristic: description

text: temperate broadleaf forest

text: beech forest

text: soil

text: Germany

characteristic: geographic location (elevation)

text: mimarks-survey

text: AGTTCATA

characteristic: multiplex identifiers

text: uncultured soil fungus

characteristic: pcr primers

text: litter bag

characteristic: sample collection device or method

characteristic: sample weight for DNA extraction

text: uncultured soil fungus

text: pyrosequencing

text: soil

text: Luvisol

characteristic: soil type


characteristic: ENA-CHECKLIST

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: 362 days leaflitter replicate 2

text: temperate broadleaf forest

characteristic: environment (biome)

text: beech forest

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: TGACGGCC

text: uncultured soil fungus

characteristic: organism

characteristic: project name

text: litter bag

text: uncultured soil fungus

text: pyrosequencing

characteristic: sequencing method

text: soil

text: Luvisol

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: depth

text: 362 days leaflitter replicate 3

characteristic: description

text: temperate broadleaf forest

text: beech forest

text: soil

text: Germany

characteristic: geographic location (elevation)

text: mimarks-survey

text: ACTCGCTG

characteristic: multiplex identifiers

text: uncultured soil fungus

characteristic: pcr primers

text: litter bag

characteristic: sample collection device or method

characteristic: sample weight for DNA extraction

text: uncultured soil fungus

text: pyrosequencing

text: soil

characteristic: soil environmental package

text: Luvisol


characteristic: ENA-CHECKLIST

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: 473 days leaflitter replicate 1

text: temperate broadleaf forest

characteristic: environment (biome)

text: beech forest

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: ACGTAGAG

text: uncultured soil fungus

characteristic: organism

characteristic: project name

text: litter bag

text: uncultured soil fungus

text: pyrosequencing

characteristic: sequencing method

text: soil

text: Luvisol

characteristic: soil type


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: depth

text: 473 days leaflitter replicate 2

characteristic: description

text: temperate broadleaf forest

text: beech forest

text: soil

text: Germany

characteristic: geographic location (elevation)

text: mimarks-survey

text: AAGTATCA

characteristic: multiplex identifiers

text: uncultured soil fungus

characteristic: pcr primers

text: litter bag

characteristic: sample collection device or method

characteristic: sample weight for DNA extraction

text: uncultured soil fungus

text: pyrosequencing

text: soil

text: Luvisol

characteristic: title


characteristic: ENA-CHECKLIST

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: 473 days leaflitter replicate 3

text: temperate broadleaf forest

characteristic: environment (biome)

text: beech forest

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: TGTGGCAA

text: uncultured soil fungus

characteristic: organism

characteristic: project name

text: litter bag

text: uncultured soil fungus

text: pyrosequencing

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: Luvisol


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UWS

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: depth

text: arid steppe

text: gaps with annual vegetation

text: soil

text: Spain

characteristic: geographic location (elevation)

text: mimarks-survey

text: soil metagenome

text: retama-thymus

text: soil metagenome

text: pyrosequencing

text: soil

text: soil from gaps with annual vegetation


characteristic: ENA-CHECKLIST

text: UWS

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: arid steppe

characteristic: environment (biome)

text: Under Retama sphaerocarpa shrubs

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Spain

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: soil metagenome

text: retama-thymus

text: soil metagenome

text: pyrosequencing

text: soil

text: soil under Retama sphaerocarpa shrubs

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UWS

text: public

text: arid steppe

text: Under Thymus hyemalis shrubs

text: soil

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: soil metagenome

characteristic: organism

text: retama-thymus

characteristic: project name

text: soil metagenome

text: pyrosequencing

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: soil under Thymus hyemalis shrubs


characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMORY UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:EMORY UNIVERSITY

text: house mouse

characteristic: common name

text: Colon

text: Mouse colon

text: mucosa

text: USA

text: host-associated

characteristic: host-associated environmental package

text: metagenome

text: Mus musculus

text: Mucosal Microbiota

text: Mus musculus

text: Illumina Miseq

text: mucosal microbiota


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMORY UNIVERSITY

text: public

characteristic: Submitter Id

characteristic: collection date

text: house mouse

text: Colon

characteristic: environment (biome)

text: Mouse colon

characteristic: environment (feature)

text: mucosa

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

text: host-associated

text: metagenome

text: Mus musculus

text: Mucosal Microbiota

text: Mus musculus

text: Illumina Miseq

text: mucosal microbiota

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UFZ

text: public

text: unfertilized

characteristic: current land use

characteristic: depth

text: cropland

text: field soil

text: soil

text: Germany

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: bad lauchst�dt

characteristic: geographic location (region and locality)

text: 4 year cro rotation: sugar beet, winter weath, spring barley, potato

characteristic: history/crop rotation

text: mimarks-survey

characteristic: investigation type

unit: mm

characteristic: mean annual and seasonal precipitation

unit: ºC

characteristic: mean annual and seasonal temperature

text: uncultured soil fungus

characteristic: organism

text: TCCTCCGCTTATTGATATGC

characteristic: pcr primers

characteristic: ph

characteristic: ph method

text: LTSFE

characteristic: project name

text: uncultured soil fungus

text: pyrosequencing

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: Haplic Chernozem

characteristic: soil taxonomic/fao classification

text: ITS

characteristic: target gene

text: FUN

unit: µg/L

characteristic: total nitrogen

unit: g/kg

characteristic: total organic carbon


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UFZ

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: mineral fertilization

characteristic: current land use

characteristic: depth

text: cropland

characteristic: environment (biome)

text: field soil

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: bad lauchst�dt

text: mimarks-survey

text: uncultured soil fungus

text: TCCTCCGCTTATTGATATGC

text: LTSFE

text: uncultured soil fungus

text: pyrosequencing

text: soil

text: Haplic Chernozem

text: ITS

text: FUN

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UFZ

characteristic: INSDC center name

text: public

text: organic fertilization

text: cropland

text: field soil

text: soil

text: Germany

text: bad lauchst�dt

characteristic: geographic location (region and locality)

characteristic: history/crop rotation

text: mimarks-survey

characteristic: investigation type

characteristic: mean annual and seasonal precipitation

characteristic: mean annual and seasonal temperature

text: uncultured soil fungus

characteristic: organism

text: TCCTCCGCTTATTGATATGC

characteristic: pcr primers

characteristic: ph

characteristic: ph method

text: LTSFE

characteristic: project name

text: uncultured soil fungus

text: pyrosequencing

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: Haplic Chernozem

characteristic: soil taxonomic/fao classification

text: ITS

characteristic: target gene

text: FUN

characteristic: total nitrogen

characteristic: total organic carbon


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UFZ

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: organic and mineral fertilization

characteristic: current land use

characteristic: depth

text: cropland

characteristic: environment (biome)

text: field soil

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: bad lauchst�dt

text: mimarks-survey

text: uncultured soil fungus

text: TCCTCCGCTTATTGATATGC

text: LTSFE

text: uncultured soil fungus

text: pyrosequencing

text: soil

text: Haplic Chernozem

text: ITS

text: FUN

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UFZ

characteristic: INSDC center name

text: public

text: unfertilized

text: cropland

text: field soil

text: soil

text: Germany

text: bad lauchst�dt

characteristic: geographic location (region and locality)

characteristic: history/crop rotation

text: mimarks-survey

characteristic: investigation type

characteristic: mean annual and seasonal precipitation

characteristic: mean annual and seasonal temperature

text: uncultured bacterium

characteristic: organism

text: CCGTCAATTCMTTTGAGTTT

characteristic: pcr primers

characteristic: ph

characteristic: ph method

text: LTSFE

characteristic: project name

text: uncultured bacterium

text: pyrosequencing

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: Haplic Chernozem

characteristic: soil taxonomic/fao classification

characteristic: target gene

text: BAC

characteristic: total nitrogen

characteristic: total organic carbon


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UFZ

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: mineral fertilization

characteristic: current land use

characteristic: depth

text: cropland

characteristic: environment (biome)

text: field soil

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: bad lauchst�dt

text: mimarks-survey

text: uncultured bacterium

text: CCGTCAATTCMTTTGAGTTT

text: LTSFE

text: uncultured bacterium

text: pyrosequencing

text: soil

text: Haplic Chernozem

text: BAC

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UFZ

characteristic: INSDC center name

text: public

text: organic fertilization

text: cropland

text: field soil

text: soil

text: Germany

text: bad lauchst�dt

characteristic: geographic location (region and locality)

characteristic: history/crop rotation

text: mimarks-survey

characteristic: investigation type

characteristic: mean annual and seasonal precipitation

characteristic: mean annual and seasonal temperature

text: uncultured bacterium

characteristic: organism

text: CCGTCAATTCMTTTGAGTTT

characteristic: pcr primers

characteristic: ph

characteristic: ph method

text: LTSFE

characteristic: project name

text: uncultured bacterium

text: pyrosequencing

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: Haplic Chernozem

characteristic: soil taxonomic/fao classification

characteristic: target gene

text: BAC

characteristic: total nitrogen

characteristic: total organic carbon


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UFZ

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: organic and mineral fertilization

characteristic: current land use

characteristic: depth

text: cropland

characteristic: environment (biome)

text: field soil

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: bad lauchst�dt

text: mimarks-survey

text: uncultured bacterium

text: CCGTCAATTCMTTTGAGTTT

text: LTSFE

text: uncultured bacterium

text: pyrosequencing

text: soil

text: Haplic Chernozem

text: BAC

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: 0 day leaflitter replicate 1

characteristic: description

text: temperate broadleaf forest

text: beech forest

text: soil

text: Germany

text: mimarks-survey

characteristic: investigation type

text: uncultured soil bacterium

characteristic: organism

text: CCTACGGGAGGCAGCAG CCGTCAATTCMTTTGAGTTT

characteristic: pcr primers

text: Bacterial communities during litter decomposition

characteristic: project name

text: litter bag

characteristic: sample collection device or method

characteristic: sample weight for DNA extraction

text: uncultured soil bacterium

text: pyrosequencing

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: Luvisol

characteristic: soil type


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: depth

text: 0 day leaflitter replicate 2

text: temperate broadleaf forest

characteristic: environment (biome)

text: beech forest

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

text: uncultured soil bacterium

text: CCTACGGGAGGCAGCAG CCGTCAATTCMTTTGAGTTT

text: litter bag

text: uncultured soil bacterium

text: pyrosequencing

text: soil

text: Luvisol


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: 0 day leaflitter replicate 3

characteristic: description

text: temperate broadleaf forest

text: beech forest

text: soil

text: Germany

text: mimarks-survey

characteristic: investigation type

text: uncultured soil bacterium

characteristic: organism

text: CCTACGGGAGGCAGCAG CCGTCAATTCMTTTGAGTTT

characteristic: pcr primers

characteristic: project name

text: litter bag

characteristic: sample collection device or method

characteristic: sample weight for DNA extraction

text: uncultured soil bacterium

text: pyrosequencing

characteristic: sequencing method

text: soil

text: Luvisol

characteristic: title


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: depth

text: 89 days leaflitter replicate 1

text: temperate broadleaf forest

characteristic: environment (biome)

text: beech forest

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

text: mimarks-survey

text: uncultured soil bacterium

text: CCTACGGGAGGCAGCAG CCGTCAATTCMTTTGAGTTT

text: litter bag

text: uncultured soil bacterium

text: pyrosequencing

text: soil

characteristic: soil environmental package

text: Luvisol

characteristic: soil type