text: UoH

text: public

characteristic: collection date

characteristic: culture collection

text: New Zealand

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (region and locality)

text: not provided

characteristic: host health state

text: Cattle

characteristic: host scientific name

text: Cattle

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

characteristic: serovar

text: Genomic DNA sequence reads


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UoH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: New Zealand

text: not provided

text: not provided

text: Goat

characteristic: isolate

text: Goat

characteristic: isolation source

text: Yersinia pseudotuberculosis

characteristic: organism

text: Yersinia pseudotuberculosis

characteristic: sequence type

characteristic: strain

text: Genomic DNA sequence reads

characteristic: title


text: UoH

text: public

characteristic: collection date

characteristic: culture collection

text: Italy

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (region and locality)

text: not provided

characteristic: host health state

text: Hare

characteristic: host scientific name

text: Hare

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

characteristic: serovar

text: Genomic DNA sequence reads


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UoH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Italy

text: not provided

text: not provided

text: Rabbit

text: Rabbit

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

text: Genomic DNA sequence reads


text: UoH

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Italy

text: not provided

text: not provided

text: White peking duck

characteristic: isolate

text: White peking duck

characteristic: isolation source

text: Yersinia pseudotuberculosis

characteristic: organism

text: Yersinia pseudotuberculosis

characteristic: sequence type

text: Genomic DNA sequence reads


text: UoH

text: public

characteristic: collection date

characteristic: culture collection

text: Germany

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (region and locality)

text: not provided

characteristic: host health state

text: hare

text: hare

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

characteristic: strain

text: Genomic DNA sequence reads

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UoH

characteristic: INSDC center name

text: public

text: Australia

text: not provided

text: not provided

text: deer.male

characteristic: host scientific name

text: deer.male

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

characteristic: serovar

text: Genomic DNA sequence reads


text: UoH

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Belgium

text: not provided

text: not provided

text: human

characteristic: isolate

text: human

characteristic: isolation source

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

text: Genomic DNA sequence reads


text: UoH

text: public

characteristic: collection date

characteristic: culture collection

text: Japan

characteristic: geographic location (country and/or sea)

text: Shimane

characteristic: geographic location (region and locality)

text: not provided

characteristic: host health state

text: mt. water

text: mt. water

text: Yersinia pseudotuberculosis

characteristic: organism

text: Yersinia pseudotuberculosis

characteristic: sequence type

text: Genomic DNA sequence reads


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UoH

characteristic: INSDC center name

text: public

text: Japan

text: Shimane

text: not provided

text: well water

text: MW Taniguci

text: well water

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

text: not provided

text: MW Taniguci

characteristic: strain

text: Genomic DNA sequence reads

characteristic: title


text: UoH

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Belgium

text: not provided

text: not provided

text: Human

characteristic: host scientific name

text: Human

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

characteristic: serovar

text: Genomic DNA sequence reads


text: UoH

text: public

characteristic: collection date

characteristic: culture collection

text: South Korea

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (region and locality)

text: not provided

characteristic: host health state

text: Human

characteristic: isolate

text: Human

characteristic: isolation source

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

text: Genomic DNA sequence reads


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UoH

characteristic: INSDC center name

text: public

text: Russia

text: Moscow

text: not provided

text: Cabbage

text: Cabbage

text: Yersinia pseudotuberculosis

characteristic: organism

text: Yersinia pseudotuberculosis

characteristic: sequence type

text: Genomic DNA sequence reads


text: UoH

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Russia

text: Moscow

text: not provided

text: Human

text: Human

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

characteristic: strain

text: Genomic DNA sequence reads

characteristic: title


text: UoH

text: public

characteristic: collection date

characteristic: culture collection

text: Russia

characteristic: geographic location (country and/or sea)

text: Moscow

characteristic: geographic location (region and locality)

text: not provided

characteristic: host health state

text: R. norvegicus

characteristic: host scientific name

text: R. norvegicus

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

text: not provided

characteristic: serovar

text: Genomic DNA sequence reads


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UoH

characteristic: INSDC center name

text: public

text: Japan

text: Shimane

text: not provided

text: Human

characteristic: isolate

text: Human

characteristic: isolation source

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

text: not provided

text: Genomic DNA sequence reads


text: UoH

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Japan

text: Tottori

text: not provided

text: Human

text: Human

text: Yersinia pseudotuberculosis

characteristic: organism

text: Yersinia pseudotuberculosis

characteristic: sequence type

text: Genomic DNA sequence reads


text: UoH

text: public

characteristic: collection date

characteristic: culture collection

text: Italy

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (region and locality)

text: not provided

characteristic: host health state

text: bird

text: bird

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

characteristic: strain

text: Genomic DNA sequence reads

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UoH

characteristic: INSDC center name

text: public

text: Japan

text: Tottori

text: not provided

text: pig

characteristic: host scientific name

text: pig

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

text: not provided

characteristic: serovar

text: Genomic DNA sequence reads


text: UoH

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Japan

text: Gifu

text: not provided

text: Monkey

text: Gifu-liver

characteristic: isolate

text: Monkey

characteristic: isolation source

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

text: Gifu-liver

text: Genomic DNA sequence reads


text: UoH

text: public

characteristic: collection date

characteristic: culture collection

text: Japan

characteristic: geographic location (country and/or sea)

text: Tokyo

characteristic: geographic location (region and locality)

text: not provided

characteristic: host health state

text: pig

text: pig

text: Yersinia pseudotuberculosis

characteristic: organism

text: Yersinia pseudotuberculosis

text: not provided

characteristic: sequence type

text: Genomic DNA sequence reads


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UoH

characteristic: INSDC center name

text: public

text: Japan

text: Tokyo

text: not provided

text: human

text: human

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

text: not provided

characteristic: strain

text: Genomic DNA sequence reads

characteristic: title


text: UoH

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Denmark

text: not provided

text: not provided

text: pet bird

characteristic: host scientific name

text: pet bird

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

characteristic: serovar

text: Genomic DNA sequence reads


text: UoH

text: public

characteristic: collection date

characteristic: culture collection

text: Japan

characteristic: geographic location (country and/or sea)

text: Yamaguchi

characteristic: geographic location (region and locality)

text: not provided

characteristic: host health state

text: human

text: Chigamatsu

characteristic: isolate

text: human

characteristic: isolation source

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

text: not provided

text: Chigamatsu

text: Genomic DNA sequence reads


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UoH

characteristic: INSDC center name

text: public

text: Japan

text: Tottori

text: not provided

text: Racoon dog

text: Racoon dog

text: Yersinia pseudotuberculosis

characteristic: organism

text: Yersinia pseudotuberculosis

characteristic: sequence type

text: Genomic DNA sequence reads


text: UoH

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Japan

text: Okayama

text: not provided

text: River water

text: River water

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

text: not provided

characteristic: strain

text: Genomic DNA sequence reads

characteristic: title


text: UoH

text: public

characteristic: collection date

characteristic: culture collection

text: Italy

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (region and locality)

text: not provided

characteristic: host health state

text: Rabbit

characteristic: host scientific name

text: Rabbit

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

characteristic: serovar

text: Genomic DNA sequence reads


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UoH

characteristic: INSDC center name

text: public

text: Japan

text: Shimane

text: not provided

text: dog

characteristic: isolate

text: dog

characteristic: isolation source

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

text: Genomic DNA sequence reads


text: UoH

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Japan

text: Shimane

text: not provided

text: pig

text: pig

text: Yersinia pseudotuberculosis

characteristic: organism

text: Yersinia pseudotuberculosis

characteristic: sequence type

text: Genomic DNA sequence reads


text: UoH

text: public

characteristic: collection date

characteristic: culture collection

text: Finland

characteristic: geographic location (country and/or sea)

text: Oulu

characteristic: geographic location (region and locality)

text: not provided

characteristic: host health state

text: Human

text: Human

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

text: not provided

characteristic: strain

text: Genomic DNA sequence reads

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UoH

characteristic: INSDC center name

text: public

text: China

text: not provided

text: not provided

text: Human

characteristic: host scientific name

text: Human

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

characteristic: serovar

text: Genomic DNA sequence reads


text: UoH

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Denmark

text: not provided

text: not provided

text: horse

text: 321 Krps

characteristic: isolate

text: horse

characteristic: isolation source

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

text: 321 Krps

text: Genomic DNA sequence reads


text: UoH

text: public

characteristic: collection date

characteristic: culture collection

text: China

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (region and locality)

text: not provided

characteristic: host health state

text: Rabbit

text: Rabbit

text: Yersinia pseudotuberculosis

characteristic: organism

text: Yersinia pseudotuberculosis

characteristic: sequence type

text: Genomic DNA sequence reads


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UoH

characteristic: INSDC center name

text: public

text: Finland

text: Turku

text: not provided

text: Human

text: Human

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

text: not provided

characteristic: strain

text: Genomic DNA sequence reads

characteristic: title


text: UoH

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Finland

text: not provided

text: not provided

text: Jack daw

characteristic: host scientific name

text: Jack daw

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

text: not provided

characteristic: serovar

text: Genomic DNA sequence reads


text: UoH

text: public

characteristic: collection date

characteristic: culture collection

text: Finland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (region and locality)

text: not provided

characteristic: host health state

text: Hedgehog

characteristic: isolate

text: Hedgehog

characteristic: isolation source

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

text: not provided

text: Genomic DNA sequence reads


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UoH

characteristic: INSDC center name

text: public

text: Finland

text: not provided

text: not provided

text: Pigeon

text: Pigeon

text: Yersinia pseudotuberculosis

characteristic: organism

text: Yersinia pseudotuberculosis

text: not provided

characteristic: sequence type

text: Genomic DNA sequence reads


text: UoH

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Finland

text: not provided

text: not provided

text: Brown hare

text: Brown hare

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

text: not provided

characteristic: strain

text: Genomic DNA sequence reads

characteristic: title


text: UoH

text: public

characteristic: collection date

characteristic: culture collection

text: Finland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (region and locality)

text: not provided

characteristic: host health state

text: Hare

characteristic: host scientific name

text: Hare

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

text: not provided

characteristic: serovar

text: Genomic DNA sequence reads


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UoH

characteristic: INSDC center name

text: public

text: Finland

text: Loppi

text: not provided

text: Potato waste on storage room floor

characteristic: isolate

text: Potato waste on storage room floor

characteristic: isolation source

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

text: not provided

text: Genomic DNA sequence reads


text: UoH

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Finland

text: Harma

text: not provided

text: Dirst sample from storage room floor

text: Dirst sample from storage room floor

text: Yersinia pseudotuberculosis

characteristic: organism

text: Yersinia pseudotuberculosis

text: not provided

characteristic: sequence type

text: Genomic DNA sequence reads


text: UoH

text: public

characteristic: collection date

characteristic: culture collection

text: Finland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (region and locality)

text: not provided

characteristic: host health state

text: Pig stool

text: Pig stool

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

text: not provided

characteristic: strain

text: Genomic DNA sequence reads

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UoH

characteristic: INSDC center name

text: public

text: Finland

text: not provided

text: not provided

text: Korkeasaari Zoo Alpine ibex

characteristic: host scientific name

text: Korkeasaari Zoo Alpine ibex

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

text: not provided

characteristic: serovar

text: Genomic DNA sequence reads


text: UoH

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Finland

text: Haapavesi

text: not provided

text: Carrot

characteristic: isolate

text: Carrot

characteristic: isolation source

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

text: not provided

text: Genomic DNA sequence reads


text: UoH

text: public

characteristic: collection date

characteristic: culture collection

text: Finland

characteristic: geographic location (country and/or sea)

text: Haapavesi

characteristic: geographic location (region and locality)

text: not provided

characteristic: host health state

text: Shrew

text: Shrew

text: Yersinia pseudotuberculosis

characteristic: organism

text: Yersinia pseudotuberculosis

text: not provided

characteristic: sequence type

text: Genomic DNA sequence reads


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UoH

characteristic: INSDC center name

text: public

text: Finland

text: Kotka

text: not provided

text: Kitchen bench surface

text: Kitchen bench surface

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

text: not provided

characteristic: strain

text: Genomic DNA sequence reads

characteristic: title


text: UoH

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: France

text: not provided

text: not provided

text: not provided

characteristic: host scientific name

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

text: not provided

characteristic: serovar

text: Genomic DNA sequence reads


text: UoH

text: public

characteristic: collection date

characteristic: culture collection

text: Sweden

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (region and locality)

text: not provided

characteristic: host health state

text: Human

characteristic: isolate

text: Human

characteristic: isolation source

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

text: not provided

text: Genomic DNA sequence reads


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UoH

characteristic: INSDC center name

text: public

text: not provided

text: not provided

text: not provided

text: not provided

text: Yersinia pseudotuberculosis

characteristic: organism

text: Yersinia pseudotuberculosis

text: not provided

characteristic: sequence type

text: Genomic DNA sequence reads


text: UoH

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Belgium

text: not provided

text: not provided

text: not provided

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

text: not provided

characteristic: strain

text: Genomic DNA sequence reads

characteristic: title


text: UoH

text: public

characteristic: collection date

characteristic: culture collection

text: Finland

characteristic: geographic location (country and/or sea)

text: Oulu

characteristic: geographic location (region and locality)

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: Human

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

text: not provided

characteristic: serovar

text: Genomic DNA sequence reads


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UoH

characteristic: INSDC center name

text: public

text: Finland

text: Oulu

text: not provided

text: human

characteristic: isolate

text: human

characteristic: isolation source

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

text: not provided

text: Genomic DNA sequence reads


text: UoH

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: not provided

text: not provided

text: not provided

text: not provided

text: not provided

text: Yersinia pseudotuberculosis

characteristic: organism

text: Yersinia pseudotuberculosis

text: not provided

characteristic: sequence type

text: Genomic DNA sequence reads


text: UoH

text: public

characteristic: collection date

text: not provided

characteristic: culture collection

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (region and locality)

text: not provided

characteristic: host health state

text: not provided

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

characteristic: strain

text: Genomic DNA sequence reads

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UoH

characteristic: INSDC center name

text: public

text: not provided

text: not provided

text: not provided

text: not provided

text: Buffalo

characteristic: host scientific name

text: P 105

text: Buffalo

text: Yersinia pseudotuberculosis

text: Yersinia pseudotuberculosis

text: P 105

text: Genomic DNA sequence reads


text: LIMM

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: human stool

characteristic: description

text: human stool

characteristic: environment (biome)

text: human stool

characteristic: environment (feature)

text: human stool

characteristic: environment (material)

text: United Kingdom

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: metagenome

text: gFOBt vs fresh

characteristic: project name

text: metagenome

characteristic: sequencing method

type: has member


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Doherty Institute

text: public

tag: Namespace:Doherty Institute

characteristic: Submitter Id

characteristic: collection date

text: Validation data for NGMASTER

text: Australia

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: Human

text: Clinical

characteristic: isolation source

text: Neisseria gonorrhoeae

characteristic: organism

text: Neisseria gonorrhoeae

text: NGMASTER: in silico NG-MAST

characteristic: title


text: Doherty Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Validation data for NGMASTER

characteristic: description

text: New Zealand

text: diseased

text: Human

characteristic: host scientific name

text: Clinical

text: Neisseria gonorrhoeae

text: Neisseria gonorrhoeae

text: NGMASTER: in silico NG-MAST


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: DTU-CFB

text: public

text: 16S rRNA amplicon from sputum

text: metagenome

text: metagenome

text: Control


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

tag: Namespace:Ludwig Center for Cancer Research, University of Lausanne, Lausanne, Switzerland  Swiss Institute of Bioinformatics

text: ArrayExpress

characteristic: broker name

text: zebrafish

characteristic: common name

text: Protocols: The spleen from a heterozygote Tg(lck:EGFP) or wild-type fish was dissected and passed through a 40μm cell strainer using the plunger of a 1-mL syringe and cells were collected in cold 1xPBS/5% FBS. A non-transgenic line was used to set up the gating and exclude autofluorescent cells. Propidium iodide (PI) staining was used to exclude dead cells. Individual cells were sorted, using a Becton Dickinson Influx sorter with 488- and 561 nm lasers (Schulte et al., 2015) and collected in a single well of a 96 well plate containing 2.3 uL of 0.2 % Triton X-100 supplemented with 1 U/uL SUPERase In RNAse inhibitor (Ambion). The size, granularity and level of fluorescence for each cell were simultaneously recorded. The Smart-seq2 protocol (Picelli et al., 2014) was used to amplify the whole transcriptome and prepare libraries. Twenty-five cycles of PCR amplification were performed.

characteristic: fsc

characteristic: gfp

characteristic: individual

text: Danio rerio

text: Danio rerio

characteristic: pi

characteristic: plate

text: Danio rerio

characteristic: ssc

text: Spleen

characteristic: tissue

characteristic: well


text: Ludwig Center for Cancer Research, University of Lausanne, Lausanne, Switzerland Swiss Institute of Bioinformatics

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: zebrafish

text: Danio rerio

characteristic: organism

text: Danio rerio

text: Danio rerio

text: Spleen

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: ArrayExpress

characteristic: broker name

text: zebrafish

characteristic: common name

characteristic: description

text: Danio rerio

text: Danio rerio

text: Danio rerio


text: public

text: ArrayExpress

text: zebrafish

characteristic: fsc

characteristic: gfp

characteristic: individual

text: Danio rerio

text: Danio rerio

characteristic: pi

characteristic: plate

text: Danio rerio

characteristic: ssc


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ArrayExpress

text: zebrafish

text: Danio rerio

text: Danio rerio

text: Danio rerio

text: Heart

characteristic: tissue

characteristic: well


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: Submitter Id

text: ArrayExpress

text: zebrafish

text: Danio rerio

characteristic: organism

text: Danio rerio

text: Danio rerio

text: Testes

characteristic: title


text: IFREMER

text: public

text: February 2011

characteristic: collection date

text: Pacific oyster

characteristic: common name

text: microbiota of larvae reared in Flow Through system at day 7

characteristic: description

text: France

characteristic: geographic location (country and/or sea)

text: Brittany, Finistère, Landunvez

characteristic: geographic location (region and locality)

text: Experimental bivalve hatchery, Argenton

characteristic: isolation source

text: Ifremer-LEMAR

characteristic: lab host

text: X: 48.533329 Y: -4.73333

characteristic: lat lon

text: Crassostrea gigas

text: Crassostrea gigas

text: microbiota of larvae in FT at day 7


text: IFREMER

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: February 2011

text: Pacific oyster

text: France

text: Brittany, Finistère, Landunvez

text: Experimental bivalve hatchery, Argenton

text: Ifremer-LEMAR

text: X: 48.533329 Y: -4.73333

text: Crassostrea gigas

text: Crassostrea gigas

text: Microbiota of larvae in FT at day 15


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IFREMER

text: public

text: February 2011

text: Pacific oyster

text: microbiota of larvae reared in Recyclingh system with 25% of fresh seawater addition at day 7

text: France

text: Brittany, Finistère, Landunvez

text: Experimental bivalve hatchery, Argenton

text: Ifremer-LEMAR

text: X: 48.533329 Y: -4.73333

text: Crassostrea gigas

text: Crassostrea gigas

text: Microbiota of larvae in RS25 at day 7


text: IFREMER

text: public

characteristic: Submitter Id

text: February 2011

characteristic: collection date

text: Pacific oyster

text: microbiota of larvae reared in recycling system with 25% seawter addition at day 15

text: France

text: Brittany, Finistère, Landunvez

text: Experimental bivalve hatchery, Argenton

text: Ifremer-LEMAR

text: X: 48.533329 Y: -4.73333

text: Crassostrea gigas

characteristic: organism

text: Crassostrea gigas

text: microbiota of larvae in RS25 at D15

characteristic: title


text: IFREMER

text: public

text: February 2011

text: Pacific oyster

characteristic: common name

text: microbiota of larvae reared in recycling system without fresh seawater addition at day 7

characteristic: description

text: France

characteristic: geographic location (country and/or sea)

text: Brittany, Finistère, Landunvez

characteristic: geographic location (region and locality)

text: Experimental bivalve hatchery, Argenton

text: Ifremer-LEMAR

text: X: 48.533329 Y: -4.73333

text: Crassostrea gigas

text: Crassostrea gigas

text: mirobiota of larvae in RS0 at day 15


text: IFREMER

characteristic: INSDC center name

text: public

text: February 2011

text: Pacific oyster

text: icrobiota of larvae reared in recycling system without fresh seawater addition at day 15

text: France

text: Brittany, Finistère, Landunvez

text: Experimental bivalve hatchery, Argenton

characteristic: isolation source

text: Ifremer-LEMAR

characteristic: lab host

text: X: 48.533329 Y: -4.73333

characteristic: lat lon

text: Crassostrea gigas

text: Crassostrea gigas

text: microbiota of larvae inRS0 at day 15


text: IFREMER

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: February 2011

text: Pacific oyster

text: bacterial communities in seawater just before the establishment of larvae in tanks

text: France

text: Brittany, Finistère, Landunvez

text: Experimental bivalve hatchery, Argenton

text: Ifremer-LEMAR

text: X: 48.533329 Y: -4.73333

text: Crassostrea gigas

text: Crassostrea gigas

text: Bacterial comunities in seawater at day 2


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IFREMER

text: public

text: February 2011

text: Pacific oyster

text: Bacterial communities in outflow seawater of Flow through system at day 7

text: France

text: Brittany, Finistère, Landunvez

text: Experimental bivalve hatchery, Argenton

text: Ifremer-LEMAR

text: X: 48.533329 Y: -4.73333

text: Crassostrea gigas

text: Crassostrea gigas

text: Bacterial communities in seawater of FT at day 7at d


text: IFREMER

text: public

characteristic: Submitter Id

text: February 2011

characteristic: collection date

text: Pacific oyster

text: Bacterial communities in outflow seawater of Flow through system at day 15

text: France

text: Brittany, Finistère, Landunvez

text: Experimental bivalve hatchery, Argenton

text: Ifremer-LEMAR

text: X: 48.533329 Y: -4.73333

text: Crassostrea gigas

characteristic: organism

text: Crassostrea gigas

text: Bcaterial communities in seawater of FT at D15

characteristic: title


text: IFREMER

text: public

text: February 2011

text: Pacific oyster

characteristic: common name

text: Bacterial communities in outflow seawater of Recycling system with 25% fresh seawater addition at day 7

characteristic: description

text: France

characteristic: geographic location (country and/or sea)

text: Brittany, Finistère, Landunvez

characteristic: geographic location (region and locality)

text: Experimental bivalve hatchery, Argenton

text: Ifremer-LEMAR

text: X: 48.533329 Y: -4.73333

text: Crassostrea gigas

text: Crassostrea gigas

text: Bacterial communities in RS25 at day 7


text: IFREMER

characteristic: INSDC center name

text: public

text: February 2011

text: Pacific oyster

text: bacterial communities in outflow seawater of recycling system with 25% fresh seawater addition at day 15

text: France

text: Brittany, Finistère, Landunvez

text: Experimental bivalve hatchery, Argenton

characteristic: isolation source

text: Ifremer-LEMAR

characteristic: lab host

text: X: 48.533329 Y: -4.73333

characteristic: lat lon

text: Crassostrea gigas

text: Crassostrea gigas

text: Bacterial comunities in seawater of RS25 at day 15


text: IFREMER

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: February 2011

text: Pacific oyster

text: Bacterial communities in outflow seawater of recycling system without fresh seawater addition at day 7

text: France

text: Brittany, Finistère, Landunvez

text: Experimental bivalve hatchery, Argenton

text: Ifremer-LEMAR

text: X: 48.533329 Y: -4.73333

text: Crassostrea gigas

text: Crassostrea gigas

text: Bacterial communities in seawater of RS0 at day 7


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IFREMER

text: public

text: February 2011

text: Pacific oyster

text: bacterial communities in outflow seawater of recycling system without fresh seawater addition at day 15

text: France

text: Brittany, Finistère, Landunvez

text: Experimental bivalve hatchery, Argenton

text: Ifremer-LEMAR

text: X: 48.533329 Y: -4.73333

text: Crassostrea gigas

text: Crassostrea gigas

text: Bacterial communities in seawater of RS0 at day 15


text: IFREMER

text: public

characteristic: Submitter Id

text: February 2011

characteristic: collection date

text: Pacific oyster

text: Bacterial communities of biofilm in bioreactor at day 2

text: France

text: Brittany, Finistère, Landunvez

text: Experimental bivalve hatchery, Argenton

text: Ifremer-LEMAR

text: X: 48.533329 Y: -4.73333

text: Crassostrea gigas

characteristic: organism

text: Crassostrea gigas

text: Bacterial communities in bioreactor at day7

characteristic: title


text: IFREMER

text: public

text: February 2011

text: Pacific oyster

characteristic: common name

text: Bacterial communities of biofilm in bioreactor of RS25 at day 7at day 7

characteristic: description

text: France

characteristic: geographic location (country and/or sea)

text: Brittany, Finistère, Landunvez

characteristic: geographic location (region and locality)

text: Experimental bivalve hatchery, Argenton

text: Ifremer-LEMAR

text: X: 48.533329 Y: -4.73333

text: Crassostrea gigas

text: Crassostrea gigas

text: Bacterial communities in BR of RS25 at day 7


text: IFREMER

characteristic: INSDC center name

text: public

text: February 2011

text: Pacific oyster

text: Bacterial communities of biofilm in bioreactor of RS25 at day 15

text: France

text: Brittany, Finistère, Landunvez

text: Experimental bivalve hatchery, Argenton

characteristic: isolation source

text: Ifremer-LEMAR

characteristic: lab host

text: X: 48.533329 Y: -4.73333

characteristic: lat lon

text: Crassostrea gigas

text: Crassostrea gigas

text: Bacterial communities in bioreactor of RS25 at day 15


text: IFREMER

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: February 2011

text: Pacific oyster

text: Bacterial communities of biofilm in bioreactor of RS0 at day 7

text: France

text: Brittany, Finistère, Landunvez

text: Experimental bivalve hatchery, Argenton

text: Ifremer-LEMAR

text: X: 48.533329 Y: -4.73333

text: Crassostrea gigas

text: Crassostrea gigas

text: Bacterial comunities in bioreactor of RS0 at day 7


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IFREMER

text: public

text: February 2011

text: Pacific oyster

text: Bacterial communities in the mixture of algal culture at day 7 just before distribution to larvae

text: France

text: Brittany, Finistère, Landunvez

text: Experimental bivalve hatchery, Argenton

text: Ifremer-LEMAR

text: X: 48.533329 Y: -4.73333

text: Crassostrea gigas

text: Crassostrea gigas

text: Bacterail commnities in algal culturesat day 7


text: IFREMER

text: public

characteristic: Submitter Id

text: February 2011

characteristic: collection date

text: Pacific oyster

text: Bacterial communities in the mixture of algal culture at day 15 just before distribution to larvae

text: France

text: Brittany, Finistère, Landunvez

text: Experimental bivalve hatchery, Argenton

text: Ifremer-LEMAR

text: X: 48.533329 Y: -4.73333

text: Crassostrea gigas

characteristic: organism

text: Crassostrea gigas

text: Bacterial communities in algal cultures at day 15

characteristic: title


text: IFREMER

text: public

text: February 2012

text: Pacific oyster

characteristic: common name

text: Bacterial communities of the biofilm in Flow Through system with 50 larvae per mL at day 7

characteristic: description

text: France

characteristic: geographic location (country and/or sea)

text: Brittany, Finistère, Landunvez

characteristic: geographic location (region and locality)

text: Experimental bivalve hatchery

text: Ifremer, LEMAR

text: X: 48.533329 Y: -4.73333

text: Crassostrea gigas

text: Crassostrea gigas

text: Biofilm in FT50 at day 7


text: IFREMER

characteristic: INSDC center name

text: public

text: February 2012

text: Pacific oyster

text: Bacterial communities of the biofilm in Flow Through system with 50 larvae per mL at day 15

text: France

text: Brittany, Finistère, Landunvez

text: Experimental bivalve hatchery

characteristic: isolation source

text: Ifremer, LEMAR

characteristic: lab host

text: X: 48.533329 Y: -4.73333

characteristic: lat lon

text: Crassostrea gigas

text: Crassostrea gigas

text: Biofilm in FT50 at day 11


text: IFREMER

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: February 2012

text: Pacific oyster

text: France

text: Brittany,Finistère, Landunvez

text: Experimental bivalve hatchery

text: Ifremer, LEMAR

text: X: 48.533329 Y: -4.73333

text: Crassostrea gigas

text: Crassostrea gigas

text: Biofilm iin FT50 at day 15


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IFREMER

text: public

text: February 2012

text: Pacific oyster

text: Bacterial communities of the biofilm in Flow Through system with 300 larvae per mL at day 7

text: France

text: Brittany,Finistère, Landunvez

text: Experimental bivalve hatchery

text: Ifremer, LEMAR

text: X: 48.533329 Y: -4.73333

text: Crassostrea gigas

text: Crassostrea gigas

text: Biofilm in FT300 at day 7


text: IFREMER

text: public

characteristic: Submitter Id

text: February 2012

characteristic: collection date

text: Pacific oyster

text: Bacterial communities of the biofilm in Flow Through system with 300 larvae per mL at day 11

text: France

text: Brittany, Finistère, Landunvez

text: Experimental bivalve hatchery

text: Ifremer, LEMAR

text: X: 48.533329 Y: -4.73333

text: Crassostrea gigas

characteristic: organism

text: Crassostrea gigas

text: Biofilm in FT300 at day 11

characteristic: title


text: IFREMER

text: public

text: February 2012

text: Pacific oyster

characteristic: common name

text: Bacterial communities of the biofilm in Flow Through system with 300 larvae per mL at day 15

characteristic: description

text: France

characteristic: geographic location (country and/or sea)

text: Brittany, Finistère, Landunvez

characteristic: geographic location (region and locality)

text: Experimental bivalve hatchery

text: Ifremer, LEMAR

text: X: 48.533329 Y: -4.73333

text: Crassostrea gigas

text: Crassostrea gigas

text: Biofilm in FT300 at day 15


text: IFREMER

characteristic: INSDC center name

text: public

text: February 2012

text: Pacific oyster

text: Bacterial communities of the biofilm in Recycling System with 50 larvae per mL at day 7

text: France

text: Brittany, Finistère, Landunvez

text: Experimental bivalve hatchery

characteristic: isolation source

text: Ifremer, LEMAR

characteristic: lab host

text: X: 48.533329 Y: -4.73333

characteristic: lat lon

text: Crassostrea gigas

text: Crassostrea gigas

text: Biofilm in RS50 at day 7


text: IFREMER

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: February 2012

text: Pacific oyster

text: Bacterial communities of the biofilm in Recycling System with 50 larvae per mL at day 15

text: France

text: Brittany, Finistère, Landunvez

text: Experimental bivalve hatchery

text: Ifremer, LEMAR

text: X: 48.533329 Y: -4.73333

text: Crassostrea gigas

text: Crassostrea gigas

text: Biofilm in RS50 at day 15


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IFREMER

text: public

text: February 2012

text: Pacific oyster

text: Bacterial communities of the biofilm in Recycling System with 300 larvae per mL at day 7

text: France

text: Brittany, Finistère, Landunvez

text: Experimental bivalve hatchery

text: Ifremer, LEMAR

text: X: 48.533329 Y: -4.73333

text: Crassostrea gigas

text: Crassostrea gigas

text: Biofilm in RS300 at day 7


text: IFREMER

text: public

characteristic: Submitter Id

text: February 2012

characteristic: collection date

text: Pacific oyster

text: Bacterial communities of the biofilm in Recycling System with 300 larvae per mL at day 11

text: France

text: Brittany, Finistère, Landunvez

text: Experimental bivalve hatchery

text: Ifremer, LEMAR

text: X: 48.533329 Y: -4.73333

text: Crassostrea gigas

characteristic: organism

text: Crassostrea gigas

text: Biofilm in RS300 at day 11

characteristic: title


text: IFREMER

text: public

text: February 2012

text: Pacific oyster

characteristic: common name

text: Bacterial communities of the biofilm in Recycling System with 300 larvae per mL at day 15

characteristic: description

text: France

characteristic: geographic location (country and/or sea)

text: Brittany,Finistère, Landunvez

characteristic: geographic location (region and locality)

text: Experimental bivalve hatchery

text: Ifremer, LEMAR

text: X: 48.533329 Y: -4.73333

text: Crassostrea gigas

text: Crassostrea gigas

text: Biofilm in RS300 at day 15


text: IFREMER

characteristic: INSDC center name

text: public

text: February 2012

text: Pacific oyster

text: Bacterial communities of seawater in Flow Through system with 50 larvae per mL at day 15

text: France

text: Brittany, Finistère, Landunvez

text: Experimental bivalve hatchery

characteristic: isolation source

text: Ifremer, LEMAR

characteristic: lab host

text: X: 48.533329 Y: -4.73333

characteristic: lat lon

text: Crassostrea gigas

text: Crassostrea gigas

text: Bacterial communities in seawater in FT50 at day 15


text: IFREMER

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: February 2012

text: Pacific oyster

text: Bacterial communities of seawater in Flow Through system with 300 larvae per mL at day 15

text: France

text: Brittany,Finistère, Landunvez

text: Experimental bivalve hatchery

text: Ifremer, LEMAR

text: X: 48.533329 Y: -4.73333

text: Crassostrea gigas

text: Crassostrea gigas

text: Bacterial communities in seawater in FT300 at day 15


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IFREMER

text: public

text: February 2012

text: Pacific oyster

text: Bacterial communities of seawater in Recycling System with 50 larvae per mL at day 15

text: France

text: Brittany, Finistère, Landunvez

text: Experimental bivalve hatchery

text: Ifremer, LEMAR

text: X: 48.533329 Y: -4.73333

text: Crassostrea gigas

text: Crassostrea gigas

text: Bacterail communities in RS50 at day 15


text: IFREMER

text: public

characteristic: Submitter Id

text: February 2012

characteristic: collection date

text: Pacific oyster

text: France

text: Brittany, Finistère, Landunvez

text: Experimental bivalve hatchery

text: Ifremer, LEMAR

text: X: 48.533329 Y: -4.73333

text: Crassostrea gigas

characteristic: organism

text: Crassostrea gigas

text: Bacterial communities in seawater in RS300 at day 15

characteristic: title


text: BAYLOR COLLEGE OF ME

text: public

tag: Namespace:BAYLOR COLLEGE OF ME

text: Escherichia coli K-12

text: Escherichia coli K-12

text: ChIP-Seq samples


text: Agricultural Research Council

text: public

tag: Namespace:Agricultural Research Council

text: pollen metagenome

text: pollen metagenome

text: Pollen metabarcoding


text: DUKE-NUS

text: public

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: Early stage CRC patient's tumour sample.


text: DUKE-NUS

characteristic: INSDC center name

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Early stage CRC patient's normal sample.


text: UL-LS

text: public

unit: m

characteristic: depth

text: Bacterial communities in the rhizosphere of spring barley after biochar soil amendment

characteristic: description

text: spring barley

characteristic: environment (biome)

text: rhizosphere

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: bacterium EM-17

text: biochar

characteristic: project name

text: bacterium EM-17

text: illumina MySeq

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: bacteria in biochar amended rhizosphere


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Centre of excellence in Biological Interactions

characteristic: Submitter Id

text: Parasemia plantaginis whole larva transcript

text: Finland

text: Parasemia plantaginis

characteristic: organism

text: Parasemia plantaginis


text: Centre of excellence in Biological Interactions

characteristic: INSDC center name

text: public

characteristic: description

text: Finland

characteristic: geographic location (country and/or sea)

text: Parasemia plantaginis

text: Parasemia plantaginis

characteristic: title


text: ZMT Bremen

text: public

tag: Namespace:ZMT Bremen

characteristic: collection date

text: Porcellio scaber specimen samples near Cologne, Germany

text: Germany

text: Cologne

characteristic: geographic location (region and locality)

text: Porcellio scaber

text: Porcellio scaber

text: Ps


text: JOHANNES GUTENBERG UNIVERSITY MAINZ

text: public

tag: Namespace:JOHANNES GUTENBERG UNIVERSITY MAINZ

text: human

characteristic: common name

text: Iran

text: Homo sapiens

text: Homo sapiens

text: female

characteristic: sex

text: bone

characteristic: tissue type

text: Early Neolithic genomes from the eastern Fertile Crescent


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: JOHANNES GUTENBERG UNIVERSITY MAINZ

text: public

text: human

text: Iran

text: Homo sapiens

text: Homo sapiens

text: male

text: bone


CECT 7225

characteristic: External Id

text: UVEG

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: CECT 7225

text: Vibrio toranzoniae is a member of the family Vibrionaceae described in 2013 by Lasa et al. Genome sequencing of Vibrio toranzoniae CECT 7225, type strain, was done using the Illumina Miseq system by the Central Service of Support to Experimental Research (SCSIE) of the University of Valencia (Spain).

text: host-associated

characteristic: environment (biome)

text: clams cultured in Galicia (Northwest of Spain)

characteristic: environment (feature)

text: clams of Ruditapes decussatus

characteristic: environment (material)

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: Vibrio toranzoniae

text: Whole genome sequencing of Vibrio toranzoniae CECT 7225, type strain

characteristic: project name

text: Vibrio toranzoniae

text: Illumina Miseq

characteristic: sequencing method

text: CECT 7225

characteristic: strain


text: UCSDMI

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: under 3

characteristic: age cat

text: months

characteristic: age unit

text: AA

characteristic: anonymized name

text: UBERON:colon

characteristic: body habitat

text: UBERON:mucosa of colon

characteristic: body product

text: UBERON:mucosa of colon

characteristic: body site

characteristic: breastmilk

text: Colon Atresia

text: colon mucous fistula

characteristic: description

text: Imperforate anus (interval stoma takedown)

characteristic: diagnosis

text: atresia

text: unfed

characteristic: diet

text: True

characteristic: elevation

text: human-associated habitat

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: obstructive

characteristic: etiology

text: 2 projects: mouse experimental regeneration of intestinal lining from stem cells; human experimental

text: human

characteristic: host common name

characteristic: host subject id

characteristic: individual

characteristic: latitude

characteristic: longitude

text: colon unfed

text: human gut metagenome

characteristic: organism

text: AA

characteristic: orig name

text: UCSDMI

text: False

text: Fistula

characteristic: pouch

text: JERE

text: CHLA

text: CHLA

characteristic: sample center

text: colon mucous fistula

characteristic: sample type

text: human gut metagenome

text: female

characteristic: sex

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: under 3

characteristic: age cat

text: months

characteristic: age unit

text: AB

characteristic: anonymized name

text: UBERON:ileum

characteristic: body habitat

text: UBERON:ileal mucosa

characteristic: body product

text: UBERON:ileal mucosa

characteristic: body site

characteristic: breastmilk

text: Small Intestine Colitis

text: ileostomy

characteristic: description

text: NEC (interval stoma takedown)

characteristic: diagnosis

text: NEC

text: fed

characteristic: diet

text: True

characteristic: elevation

text: human-associated habitat

text: human-associated habitat

text: host-associated

text: feces

text: infectious

text: human

text: small intestine fed

text: human gut metagenome

text: UCSDMI

text: False

text: ROBE

text: CHLA

characteristic: project name

text: CHLA

text: ileostomy

text: human gut metagenome

text: female


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: under 3

text: months

text: AC

text: UBERON:ileum

text: UBERON:ileal mucosa

text: UBERON:ileal mucosa

text: Small Intestine Colitis

text: ileum hartmann

text: NEC (interval stoma takedown)

text: NEC

text: unfed

text: True

text: human-associated habitat

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: infectious

characteristic: etiology

text: human

characteristic: host common name

characteristic: host subject id

characteristic: individual

characteristic: latitude

characteristic: longitude

text: small intestine unfed

text: human gut metagenome

characteristic: organism

text: AC

characteristic: orig name

text: UCSDMI

text: False

text: JERE

text: CHLA

text: CHLA

characteristic: sample center

text: ileum hartmann

characteristic: sample type

text: human gut metagenome

text: female

characteristic: sex

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: under 3

characteristic: age cat

text: months

characteristic: age unit

text: AF

characteristic: anonymized name

text: UBERON:colon

characteristic: body habitat

text: UBERON:mucosa of colon

characteristic: body product

text: UBERON:mucosa of colon

characteristic: body site

characteristic: breastmilk

text: Colon Atresia

text: colostomy

characteristic: description

characteristic: diagnosis

text: atresia

text: fed

characteristic: diet

text: True

characteristic: elevation

text: human-associated habitat

text: human-associated habitat

text: host-associated

text: feces

text: obstructive

text: human

text: colon fed

text: human gut metagenome

text: AF

text: UCSDMI

text: False

text: JERE

text: CHLA

characteristic: project name

text: CHLA

text: colostomy

text: human gut metagenome

text: male


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: under 3

text: months

text: AH

text: UBERON:cecum

text: UBERON:cecum mucosa

text: UBERON:cecum mucosa

text: ileum

text: Midgut volvulous (acute)

text: fed

text: True

text: human-associated habitat

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: human

characteristic: host common name

characteristic: host subject id

characteristic: individual

characteristic: latitude

characteristic: longitude

text: colon fed

text: human gut metagenome

characteristic: organism

text: AH

characteristic: orig name

text: UCSDMI

text: False

text: JERE

text: CHLA

text: CHLA

characteristic: sample center

text: ileum

characteristic: sample type

text: human gut metagenome

text: male

characteristic: sex

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: under 3

characteristic: age cat

text: months

characteristic: age unit

text: AI

characteristic: anonymized name

text: UBERON:colon

characteristic: body habitat

text: UBERON:mucosa of colon

characteristic: body product

text: UBERON:mucosa of colon

characteristic: body site

characteristic: breastmilk

text: sigmoid colon hartmann

characteristic: description

text: Midgut volvulous (acute)

characteristic: diagnosis

text: unfed

characteristic: diet

text: True

characteristic: elevation

text: human-associated habitat

text: human-associated habitat

text: host-associated

text: feces

text: human

text: colon unfed

text: human gut metagenome

text: AI

text: UCSDMI

text: False

text: Hartmann's

characteristic: pouch

text: JERE

text: CHLA

characteristic: project name

text: CHLA

text: sigmoid colon hartmann

text: human gut metagenome

text: male


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: under 3

text: months

text: AL

text: UBERON:ileum

text: UBERON:ileal mucosa

text: UBERON:ileal mucosa

text: Small Intestine Colitis

text: ileostomy

text: NEC (interval stoma takedown)

text: NEC

text: fed

text: True

text: human-associated habitat

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: infectious

characteristic: etiology

text: human

characteristic: host common name

characteristic: host subject id

characteristic: individual

characteristic: latitude

characteristic: longitude

text: small intestine fed

text: human gut metagenome

characteristic: organism

characteristic: orig name

text: UCSDMI

text: False

text: ROBE

text: CHLA

text: CHLA

characteristic: sample center

text: ileostomy

characteristic: sample type

text: human gut metagenome

text: female

characteristic: sex

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: under 3

characteristic: age cat

text: months

characteristic: age unit

text: AM

characteristic: anonymized name

text: UBERON:colon

characteristic: body habitat

text: UBERON:mucosa of colon

characteristic: body product

text: UBERON:mucosa of colon

characteristic: body site

characteristic: breastmilk

text: Colon Colitis

text: colon hartmann

characteristic: description

text: NEC (interval stoma takedown)

characteristic: diagnosis

text: NEC

text: unfed

characteristic: diet

text: True

characteristic: elevation

text: human-associated habitat

text: human-associated habitat

text: host-associated

text: feces

text: infectious

text: human

text: colon unfed

text: human gut metagenome

text: AM

text: UCSDMI

text: False

text: Hartmann's

characteristic: pouch

text: JERE

text: CHLA

characteristic: project name

text: CHLA

text: colon hartmann

text: human gut metagenome

text: female


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: under 3

text: months

text: B

text: UBERON:ileum

text: UBERON:ileal mucosa

text: UBERON:ileal mucosa

text: Small Intestine Atresia

text: ileum hartmann

text: atresia

text: unfed

text: True

text: human-associated habitat

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: obstructive

characteristic: etiology

text: human

characteristic: host common name

characteristic: host subject id

characteristic: individual

characteristic: latitude

characteristic: longitude

text: small intestine unfed

text: human gut metagenome

characteristic: organism

characteristic: orig name

text: UCSDMI

text: False

text: ROBE

text: CHLA

text: CHLA

characteristic: sample center

text: ileum hartmann

characteristic: sample type

text: human gut metagenome

text: female

characteristic: sex

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: under 3

characteristic: age cat

text: months

characteristic: age unit

text: C

characteristic: anonymized name

text: UBERON:ileum

characteristic: body habitat

text: UBERON:ileal mucosa

characteristic: body product

text: UBERON:ileal mucosa

characteristic: body site

characteristic: breastmilk

text: Small Intestine Colitis

text: proximal loop ileostomy

characteristic: description

text: FIP (interval stoma takedown)

characteristic: diagnosis

text: fed

characteristic: diet

text: True

characteristic: elevation

text: human-associated habitat

text: human-associated habitat

text: host-associated

text: feces

text: infectious

text: human

text: small intestine fed

text: human gut metagenome

text: C

text: UCSDMI

text: False

text: JERE

text: CHLA

characteristic: project name

text: CHLA

text: proximal loop ileostomy

text: human gut metagenome

text: male


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: under 3

text: months

text: EF

text: UBERON:colon

text: Colon Atresia

text: colostomy

text: atresia

text: fed

text: True

text: host-associated

characteristic: env package

text: obstructive

characteristic: etiology

text: Zebrafish

text: human

characteristic: host common name

characteristic: host subject id

characteristic: individual

characteristic: latitude

characteristic: longitude

text: colon fed

text: human gut metagenome

characteristic: organism

text: EF

characteristic: orig name

text: UCSDMI

text: False

text: JERE

text: CHLA

text: CHLA

characteristic: sample center

text: colostomy

characteristic: sample type

text: human gut metagenome

text: male

characteristic: sex

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: under 3

characteristic: age cat

text: months

characteristic: age unit

text: EG

characteristic: anonymized name

text: UBERON:colon

characteristic: body habitat

characteristic: breastmilk

text: Colon Atresia

text: colon mucous fistula

characteristic: description

characteristic: diagnosis

text: atresia

text: unfed

characteristic: diet

text: True

characteristic: elevation

text: host-associated

text: obstructive

text: Zebrafish

text: human

text: colon unfed

text: human gut metagenome

text: UCSDMI

text: False

text: Fistula

characteristic: pouch

text: ROBE

text: CHLA

characteristic: project name

text: CHLA

text: colon mucous fistula

text: human gut metagenome

text: male


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: under 3

text: months

text: EJ

text: UBERON:colon

text: Colon Atresia

text: colostomy

text: atresia

text: fed

text: True

text: host-associated

characteristic: env package

text: obstructive

characteristic: etiology

text: Zebrafish

text: human

characteristic: host common name

characteristic: host subject id

characteristic: individual

characteristic: latitude

characteristic: longitude

text: colon fed

text: human gut metagenome

characteristic: organism

characteristic: orig name

text: UCSDMI

text: False

text: ROBE

text: CHLA

text: CHLA

characteristic: sample center

text: colostomy

characteristic: sample type

text: human gut metagenome

text: male

characteristic: sex

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: under 3

characteristic: age cat

text: months

characteristic: age unit

text: EK

characteristic: anonymized name

text: UBERON:colon

characteristic: body habitat

characteristic: breastmilk

text: Colon Atresia

text: colon mucous fistula

characteristic: description

characteristic: diagnosis

text: atresia

text: unfed

characteristic: diet

text: True

characteristic: elevation

text: host-associated

text: obstructive

text: Zebrafish

text: human

text: colon unfed

text: human gut metagenome

text: EK

text: UCSDMI

text: False

text: Fistula

characteristic: pouch

text: JERE

text: CHLA

characteristic: project name

text: CHLA

text: colon mucous fistula

text: human gut metagenome

text: male


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: under 3

text: months

text: EK

text: UBERON:colon

text: Colon Atresia

text: colon mucous fistula

text: atresia

text: unfed

text: True

text: host-associated

characteristic: env package

text: Zebrafish

text: human

characteristic: host common name

characteristic: host subject id

characteristic: individual

characteristic: latitude

characteristic: longitude

text: colon unfed

text: human gut metagenome

characteristic: organism

characteristic: orig name

text: UCSDMI

text: False

text: ROBE

text: CHLA

text: CHLA

characteristic: sample center

text: colon mucous fistula

characteristic: sample type

text: human gut metagenome

text: male

characteristic: sex

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: under 3

characteristic: age cat

text: months

characteristic: age unit

text: EN

characteristic: anonymized name

text: UBERON:jejunum

characteristic: body habitat

characteristic: breastmilk

text: Small Intestine Atresia

text: jejunostomy

characteristic: description

text: Jejunal atresia (interval stoma takedown)

characteristic: diagnosis

text: atresia

text: fed

characteristic: diet

text: True

characteristic: elevation

text: host-associated

text: obstructive

characteristic: etiology

text: Zebrafish

text: human

text: small intestine fed

text: human gut metagenome

text: EN

text: UCSDMI

text: False

text: JERE

text: CHLA

characteristic: project name

text: CHLA

text: jejunostomy

text: human gut metagenome

text: male


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: under 3

text: months

text: ER

text: UBERON:colon

text: Colon Atresia

text: colostomy

text: atresia

text: fed

text: True

text: host-associated

characteristic: env package

text: obstructive

text: Zebrafish

text: human

characteristic: host common name

characteristic: host subject id

characteristic: individual

characteristic: latitude

characteristic: longitude

text: colon fed

text: human gut metagenome

characteristic: organism

text: ER

characteristic: orig name

text: UCSDMI

text: False

text: JERE

text: CHLA

text: CHLA

characteristic: sample center

text: colostomy

characteristic: sample type

text: human gut metagenome

text: female

characteristic: sex

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: under 3

characteristic: age cat

text: months

characteristic: age unit

text: ET

characteristic: anonymized name

text: UBERON:colon

characteristic: body habitat

characteristic: breastmilk

text: Colon Colitis

text: colostomy

characteristic: description

text: NEC (interval stoma takedown)

characteristic: diagnosis

text: NEC

text: fed

characteristic: diet

text: True

characteristic: elevation

text: host-associated

text: infectious

characteristic: etiology

text: Zebrafish

text: human

text: colon fed

text: human gut metagenome

text: ET

text: UCSDMI

text: False

text: JERE

text: CHLA

characteristic: project name

text: CHLA

text: colostomy

text: human gut metagenome

text: female


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: under 3

text: months

text: EU

text: UBERON:colon

text: Colon Colitis

text: colon hartmann

text: NEC (interval stoma takedown)

text: NEC

text: unfed

text: True

text: host-associated

characteristic: env package

text: infectious

text: Zebrafish

text: human

characteristic: host common name

characteristic: host subject id

characteristic: individual

characteristic: latitude

characteristic: longitude

text: colon unfed

text: human gut metagenome

characteristic: organism

text: EU

characteristic: orig name

text: UCSDMI

text: False

text: Hartmann's

characteristic: pouch

text: JERE

text: CHLA

text: CHLA

characteristic: sample center

text: colon hartmann

characteristic: sample type

text: human gut metagenome

text: female

characteristic: sex

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: under 3

characteristic: age cat

text: months

characteristic: age unit

text: EV

characteristic: anonymized name

text: UBERON:ileum

characteristic: body habitat

characteristic: breastmilk

text: Small Intestine Colitis

text: ileostomy

characteristic: description

text: NEC (interval stoma takedown)

characteristic: diagnosis

text: NEC

text: fed

characteristic: diet

text: True

characteristic: elevation

text: host-associated

text: infectious

characteristic: etiology

text: Zebrafish

text: human

text: small intestine fed

text: human gut metagenome

text: EV

text: UCSDMI

text: False

text: JERE

text: CHLA

characteristic: project name

text: CHLA

text: ileostomy

text: human gut metagenome

text: male


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: under 3

text: months

text: EX

text: UBERON:colon

text: Colon Atresia

text: colostomy

text: atresia

text: fed

text: True

text: host-associated

characteristic: env package

text: obstructive

text: Zebrafish

text: human

characteristic: host common name

characteristic: host subject id

characteristic: individual

characteristic: latitude

characteristic: longitude

text: colon fed

text: human gut metagenome

characteristic: organism

text: EX

characteristic: orig name

text: UCSDMI

text: False

text: JERE

text: CHLA

text: CHLA

characteristic: sample center

text: colostomy

characteristic: sample type

text: human gut metagenome

text: male

characteristic: sex

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: under 3

characteristic: age cat

text: months

characteristic: age unit

text: EY

characteristic: anonymized name

text: UBERON:colon

characteristic: body habitat

characteristic: breastmilk

text: Colon Atresia

text: colon mucous fistula

characteristic: description

characteristic: diagnosis

text: atresia

text: unfed

characteristic: diet

text: True

characteristic: elevation

text: host-associated

text: obstructive

characteristic: etiology

text: Zebrafish

text: human

text: colon unfed

text: human gut metagenome

text: EY

text: UCSDMI

text: False

text: Fistula

characteristic: pouch

text: JERE

text: CHLA

characteristic: project name

text: CHLA

text: colon mucous fistula

text: human gut metagenome

text: male


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: Three or older

text: months

text: FB

text: UBERON:ileum

text: Small Intestine Colitis

text: ileum

text: Ulcerative colitis

text: Ulcerative colitis

text: fed

text: True

text: host-associated

characteristic: env package

text: Zebrafish

text: human

characteristic: host common name

characteristic: host subject id

characteristic: individual

characteristic: latitude

characteristic: longitude

text: small intestine fed

text: human gut metagenome

characteristic: organism

text: FB

characteristic: orig name

text: UCSDMI

text: False

text: JERE

text: CHLA

text: CHLA

characteristic: sample center

text: ileum

characteristic: sample type

text: 50a (same as pt 21)

text: human gut metagenome

text: female

characteristic: sex

text: zebrafish

characteristic: source

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: Three or older

characteristic: age cat

text: months

characteristic: age unit

text: FC

characteristic: anonymized name

text: UBERON:rectum

characteristic: body habitat

characteristic: breastmilk

text: Colon Colitis

text: rectum

characteristic: description

text: Ulcerative colitis

characteristic: diagnosis

text: Ulcerative colitis

text: unfed

characteristic: diet

text: True

characteristic: elevation

text: host-associated

text: Zebrafish

text: human

text: human gut metagenome

text: FC

text: UCSDMI

text: False

text: Hartmann's

characteristic: pouch

text: JERE

text: CHLA

characteristic: project name

text: CHLA

text: rectum

text: 50b (same as pt 21)

text: human gut metagenome

text: female

text: zebrafish


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: under 3

text: months

text: FD

text: UBERON:ileum

text: Small Intestine Colitis

text: ileostomy

text: NEC then HD (interval stoma takedown)

text: NEC

text: fed

text: True

text: host-associated

characteristic: env package

text: infectious

characteristic: etiology

text: Zebrafish

text: human

characteristic: host common name

characteristic: host subject id

characteristic: individual

characteristic: latitude

characteristic: longitude

text: small intestine fed

text: human gut metagenome

characteristic: organism

characteristic: orig name

text: UCSDMI

text: False

text: ROBE

text: CHLA

text: CHLA

characteristic: sample center

text: ileostomy

characteristic: sample type

text: human gut metagenome

text: male

characteristic: sex

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: under 3

characteristic: age cat

text: months

characteristic: age unit

text: FE

characteristic: anonymized name

text: UBERON:ileum

characteristic: body habitat

characteristic: breastmilk

text: Small Intestine Colitis

text: ileum hartmann

characteristic: description

text: NEC then HD (interval stoma takedown)

characteristic: diagnosis

text: NEC

text: unfed

characteristic: diet

text: True

characteristic: elevation

text: host-associated

text: infectious

text: Zebrafish

text: human

text: small intestine unfed

text: human gut metagenome

text: UCSDMI

text: False

text: ROBE

text: CHLA

characteristic: project name

text: CHLA

text: ileum hartmann

text: human gut metagenome

text: male


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: Three or older

text: months

text: FF

text: UBERON:colon

text: Colon Atresia

text: colostomy

text: HD

text: fed

text: True

text: host-associated

characteristic: env package

text: Zebrafish

text: human

characteristic: host common name

characteristic: host subject id

characteristic: individual

characteristic: latitude

characteristic: longitude

text: colon fed

text: human gut metagenome

characteristic: organism

text: FF

characteristic: orig name

text: UCSDMI

text: False

text: JERE

text: CHLA

text: CHLA

characteristic: sample center

text: colostomy

characteristic: sample type

text: human gut metagenome

text: male

characteristic: sex

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: Three or older

characteristic: age cat

text: months

characteristic: age unit

text: FG

characteristic: anonymized name

text: UBERON:colon

characteristic: body habitat

text: Colon Atresia

text: colon hartmann

characteristic: description

text: HD

characteristic: diagnosis

text: unfed

characteristic: diet

text: True

characteristic: elevation

text: host-associated

text: Zebrafish

text: human

text: colon unfed

text: human gut metagenome

text: FG

text: UCSDMI

text: False

text: Hartmann's

characteristic: pouch

text: JERE

text: CHLA

characteristic: project name

text: CHLA

text: colon hartmann

text: human gut metagenome

text: male


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: Three or older

text: months

text: FH

text: UBERON:colon

text: Colon Atresia

text: distal colon (likely aganglionic)

text: HD

text: unfed

text: True

text: host-associated

characteristic: env package

text: Zebrafish

text: human

characteristic: host common name

characteristic: host subject id

characteristic: individual

characteristic: latitude

characteristic: longitude

text: colon unfed

text: human gut metagenome

characteristic: organism

text: FH

characteristic: orig name

text: UCSDMI

text: False

text: JERE

text: CHLA

text: CHLA

characteristic: sample center

text: distal colon (likely aganglionic)

characteristic: sample type

text: human gut metagenome

text: male

characteristic: sex

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: under 3

characteristic: age cat

text: months

characteristic: age unit

text: FN

characteristic: anonymized name

text: UBERON:colon

characteristic: body habitat

characteristic: breastmilk

text: Colon Atresia

text: colostomy

characteristic: description

characteristic: diagnosis

text: atresia

text: fed

characteristic: diet

text: True

characteristic: elevation

text: host-associated

text: obstructive

characteristic: etiology

text: Zebrafish

text: human

text: colon fed

text: human gut metagenome

text: FN

text: UCSDMI

text: False

text: JERE

text: CHLA

characteristic: project name

text: CHLA

text: colostomy

text: human gut metagenome

text: male


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: under 3

text: months

text: FR

text: UBERON:jejunum

text: jejunum

text: NEC (acute)

text: NEC

text: fed

text: True

text: host-associated

characteristic: env package

text: Zebrafish

text: human

characteristic: host common name

characteristic: host subject id

characteristic: individual

characteristic: latitude

characteristic: longitude

text: small intestine fed

text: human gut metagenome

characteristic: organism

characteristic: orig name

text: UCSDMI

text: False

text: ROBE

text: CHLA

text: CHLA

characteristic: sample center

text: jejunum

characteristic: sample type

text: human gut metagenome

text: male

characteristic: sex

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: under 3

characteristic: age cat

text: months

characteristic: age unit

text: FS

characteristic: anonymized name

text: UBERON:ileum

characteristic: body habitat

text: ileum

characteristic: description

text: FIP (acute)

characteristic: diagnosis

text: fed

characteristic: diet

text: True

characteristic: elevation

text: host-associated

text: Zebrafish

text: human

text: small intestine fed

text: human gut metagenome

text: FS

text: UCSDMI

text: False

text: JERE

text: CHLA

characteristic: project name

text: CHLA

text: ileum

text: human gut metagenome

text: female


characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: Three or older

text: months

text: FT

text: UBERON:ileum

text: Small Intestine Atresia

text: ileum

text: HD

text: fed

text: True

text: host-associated

characteristic: env package

text: Zebrafish

text: human

characteristic: host common name

characteristic: host subject id

characteristic: individual

characteristic: latitude

characteristic: longitude

text: small intestine fed

text: human gut metagenome

characteristic: organism

text: FT

characteristic: orig name

text: UCSDMI

text: False

text: JERE

text: CHLA

text: CHLA

characteristic: sample center

text: ileum

characteristic: sample type

text: human gut metagenome

text: male

characteristic: sex

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: Three or older

characteristic: age cat

text: months

characteristic: age unit

text: FW

characteristic: anonymized name

text: UBERON:colon

characteristic: body habitat

text: Colon Colitis

text: colon

characteristic: description

text: Ulcerative colitis

characteristic: diagnosis

text: Ulcerative colitis

text: fed

characteristic: diet

text: True

characteristic: elevation

text: host-associated

text: Zebrafish

text: human

text: colon fed

text: human gut metagenome

text: FW

text: UCSDMI

text: False

text: JERE

text: CHLA

characteristic: project name

text: CHLA

text: colon

text: human gut metagenome

text: female


characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: under 3

text: months

text: GB

text: UBERON:colon

text: colostomy

text: Atresia (interval stoma revision)

text: atresia

text: fed

text: True

text: host-associated

characteristic: env package

text: obstructive

characteristic: etiology

text: 2 projects: mouse experimental regeneration of intestinal

text: human

characteristic: host common name

characteristic: host subject id

characteristic: individual

characteristic: latitude

characteristic: longitude

text: colon fed

text: human gut metagenome

characteristic: organism

text: GB

characteristic: orig name

text: UCSDMI

text: False

text: JERE

text: CHLA

text: CHLA

characteristic: sample center

text: colostomy

characteristic: sample type

text: human gut metagenome

text: male

characteristic: sex

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: under 3

characteristic: age cat

text: months

characteristic: age unit

text: GF

characteristic: anonymized name

text: UBERON:rectum

characteristic: body habitat

text: Colon Atresia

text: Rectal fistula

characteristic: description

text: Imperforate anus (PSARP)

characteristic: diagnosis

text: atresia

text: fed

characteristic: diet

text: True

characteristic: elevation

text: host-associated

text: human

text: human gut metagenome

text: UCSDMI

text: False

text: ROBE

text: CHLA

characteristic: project name

text: CHLA

text: Rectal fistula

text: human gut metagenome

text: male


characteristic: ENA-CHECKLIST

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: under 3

text: months

text: GG

text: UBERON:colon

text: Colon Atresia

text: colon mucous fistula

text: atresia

text: unfed

text: True

text: host-associated

characteristic: env package

text: obstructive

characteristic: etiology

text: human

characteristic: host common name

characteristic: host subject id

characteristic: individual

characteristic: latitude

characteristic: longitude

text: colon unfed

text: human gut metagenome

characteristic: organism

text: GG

characteristic: orig name

text: UCSDMI

text: False

text: Fistula

characteristic: pouch

text: JERE

text: CHLA

text: CHLA

characteristic: sample center

text: colon mucous fistula

characteristic: sample type

text: human gut metagenome

text: female

characteristic: sex

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: under 3

characteristic: age cat

text: months

characteristic: age unit

text: GI

characteristic: anonymized name

text: UBERON:colon

characteristic: body habitat

characteristic: breastmilk

text: Colon Atresia

text: colostomy

characteristic: description

characteristic: diagnosis

text: atresia

text: fed

characteristic: diet

text: True

characteristic: elevation

text: host-associated

text: obstructive

text: human

text: colon fed

text: human gut metagenome

text: UCSDMI

text: False

text: ROBE

text: CHLA

characteristic: project name

text: CHLA

text: colostomy

text: human gut metagenome

text: male


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: under 3

text: months

text: GJ

text: UBERON:colon

text: Colon Atresia

text: colon mucous fistula

text: atresia

text: unfed

text: True

text: host-associated

characteristic: env package

text: obstructive

characteristic: etiology

text: human

characteristic: host common name

characteristic: host subject id

characteristic: individual

characteristic: latitude

characteristic: longitude

text: colon unfed

text: human gut metagenome

characteristic: organism

characteristic: orig name

text: UCSDMI

text: False

text: Fistula

characteristic: pouch

text: ROBE

text: CHLA

text: CHLA

characteristic: sample center

text: colon mucous fistula

characteristic: sample type

text: human gut metagenome

text: male

characteristic: sex

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: under 3

characteristic: age cat

text: months

characteristic: age unit

text: GK

characteristic: anonymized name

text: UBERON:colon

characteristic: body habitat

characteristic: breastmilk

text: Colon Atresia

text: colostomy

characteristic: description

characteristic: diagnosis

text: atresia

text: fed

characteristic: diet

text: True

characteristic: elevation

text: host-associated

text: obstructive

text: human

text: colon fed

text: human gut metagenome

text: GK

text: UCSDMI

text: False

text: Fistula

text: ROBE

text: CHLA

characteristic: project name

text: CHLA

text: colostomy

text: human gut metagenome

text: male


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: under 3

text: months

text: GO

text: UBERON:ileum

text: Small Intestine Colitis

text: ileostomy

text: NEC (interval stoma takedown)

text: NEC

text: fed

text: True

text: host-associated

characteristic: env package

text: infectious

characteristic: etiology

text: human

characteristic: host common name

characteristic: host subject id

characteristic: individual

characteristic: latitude

characteristic: longitude

text: small intestine fed

text: human gut metagenome

characteristic: organism

text: GO

characteristic: orig name

text: UCSDMI

text: False

text: ROBE

text: CHLA

text: CHLA

characteristic: sample center

text: ileostomy

characteristic: sample type

text: human gut metagenome

text: male

characteristic: sex

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: under 3

characteristic: age cat

text: months

characteristic: age unit

text: GP

characteristic: anonymized name

text: UBERON:ileum

characteristic: body habitat

characteristic: breastmilk

text: Small Intestine Colitis

text: ileum hartmann

characteristic: description

text: NEC (interval stoma takedown)

characteristic: diagnosis

text: NEC

text: unfed

characteristic: diet

text: True

characteristic: elevation

text: host-associated

text: infectious

text: human

text: small intestine unfed

text: human gut metagenome

text: GP

text: UCSDMI

text: False

text: ROBE

text: CHLA

characteristic: project name

text: CHLA

text: ileum hartmann

text: human gut metagenome

text: male


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: under 3

text: months

text: GQ

text: UBERON:colon

text: Colon Atresia

text: colostomy

text: atresia

text: fed

text: True

text: host-associated

characteristic: env package

text: obstructive

characteristic: etiology

text: human

characteristic: host common name

characteristic: host subject id

characteristic: individual

characteristic: latitude

characteristic: longitude

text: colon fed

text: human gut metagenome

characteristic: organism

text: GQ

characteristic: orig name

text: UCSDMI

text: False

text: ROBE

text: CHLA

text: CHLA

characteristic: sample center

text: colostomy

characteristic: sample type

text: human gut metagenome

text: female

characteristic: sex

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: under 3

characteristic: age cat

text: months

characteristic: age unit

text: GR

characteristic: anonymized name

text: UBERON:colon

characteristic: body habitat

characteristic: breastmilk

text: Colon Atresia

text: colon mucous fistula

characteristic: description

characteristic: diagnosis

text: atresia

text: unfed

characteristic: diet

text: True

characteristic: elevation

text: host-associated

text: obstructive

text: human

text: colon unfed

text: human gut metagenome

text: GR

text: UCSDMI

text: False

text: Fistula

characteristic: pouch

text: ROBE

text: CHLA

characteristic: project name

text: CHLA

text: colon mucous fistula

text: human gut metagenome

text: female


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DTU-CFB

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: 16S rRNA amplicon from sputum

text: metagenome

characteristic: organism

text: metagenome

characteristic: title


text: DTU-CFB

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: 16S rRNA amplicon from sputum

text: metagenome

text: metagenome

text: Quitter


text: DTU-CFB

text: public

text: 16S rRNA amplicon from sputum

characteristic: description

text: metagenome

text: metagenome

text: nonQuitter