text: ENA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: bread wheat

text: LP.02 two leaves visible stage

text: infect

text: time

text: Puccinia striiformis f. sp. tritici

text: Triticum aestivum

text: leaf (EFO_0000993)

characteristic: recurated from

text: Triticum aestivum

text: 72 hour

characteristic: title


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ENA

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: bread wheat

characteristic: common name

characteristic: cultivar

text: LP.02 two leaves visible stage

characteristic: dev stage

text: infect

characteristic: experimental factor 1

text: time

characteristic: experimental factor 2

text: control (EFO_0001461)

characteristic: infect

text: Triticum aestivum

characteristic: organism

text: leaf (EFO_0000993)

characteristic: organism part

text: Triticum aestivum

text: 0 hour

characteristic: time

text: ENA Crop Plant sample enhanced annotation


text: ENA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: bread wheat

text: LP.02 two leaves visible stage

text: infect

text: time

text: Blumeria graminis f. sp. tritici

text: Triticum aestivum

text: leaf (EFO_0000993)

characteristic: recurated from

text: Triticum aestivum

text: 24 hour

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ENA

text: public

characteristic: INSDC status

text: bread wheat

text: LP.02 two leaves visible stage

text: infect

text: time

text: Blumeria graminis f. sp. tritici

text: Triticum aestivum

text: leaf (EFO_0000993)

text: Triticum aestivum

text: 48 hour


text: ENA

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: bread wheat

characteristic: common name

characteristic: cultivar

text: LP.02 two leaves visible stage

characteristic: dev stage

text: infect

text: time

text: Blumeria graminis f. sp. tritici

text: Triticum aestivum

text: leaf (EFO_0000993)

text: Triticum aestivum

text: 72 hour


text: ENA

text: public

text: 12 day

characteristic: age

text: age

characteristic: experimental factor 1

text: genotype

characteristic: experimental factor 2

text: organism part

characteristic: experimental factor 3

text: B73 line

characteristic: genotype

text: pollination

characteristic: initial time point

text: Zea mays

characteristic: organism

text: seed (EFO_0000991)

characteristic: organism part

text: Zea mays


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ENA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: 16 day

text: age

text: genotype

text: organism part

text: B73 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

characteristic: recurated from

text: Zea mays

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ENA

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 20 day

text: age

text: genotype

text: organism part

text: B73 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


text: ENA

text: public

text: 24 day

characteristic: age

text: age

characteristic: experimental factor 1

text: genotype

characteristic: experimental factor 2

text: organism part

characteristic: experimental factor 3

text: B73 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


text: ENA

text: public

text: 30 day

text: age

text: genotype

text: organism part

text: B73 line

characteristic: genotype

text: pollination

characteristic: initial time point

text: Zea mays

characteristic: organism

text: seed (EFO_0000991)

characteristic: organism part

text: Zea mays


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ENA

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: 36 day

text: age

text: genotype

text: organism part

text: B73 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


characteristic: ENA-LAST-UPDATE

text: ENA

characteristic: INSDC last update

text: public

text: 12 day

text: age

text: genotype

text: organism part

text: B97 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

characteristic: recurated from

text: Zea mays

characteristic: title


characteristic: External Id

text: ENA

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 16 day

text: age

text: genotype

text: organism part

text: B97 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


text: ENA

text: public

text: 20 day

characteristic: age

text: age

characteristic: experimental factor 1

text: genotype

characteristic: experimental factor 2

text: organism part

characteristic: experimental factor 3

text: B97 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


text: ENA

text: public

text: 24 day

text: age

text: genotype

text: organism part

text: B97 line

characteristic: genotype

text: pollination

characteristic: initial time point

text: Zea mays

characteristic: organism

text: seed (EFO_0000991)

characteristic: organism part

text: Zea mays


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ENA

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: 30 day

text: age

text: genotype

text: organism part

text: B97 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


characteristic: ENA-LAST-UPDATE

text: ENA

characteristic: INSDC last update

text: public

text: 36 day

text: age

text: genotype

text: organism part

text: B97 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

characteristic: recurated from

text: Zea mays

characteristic: title


characteristic: External Id

text: ENA

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: not applicable not applicable

text: age

text: genotype

text: organism part

text: B97 line

text: Zea mays

text: leaf (EFO_0000993)

text: Zea mays


text: ENA

text: public

text: 12 day

characteristic: age

text: age

characteristic: experimental factor 1

text: genotype

characteristic: experimental factor 2

text: organism part

characteristic: experimental factor 3

text: CML103 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


text: ENA

text: public

text: 16 day

text: age

text: genotype

text: organism part

text: CML103 line

characteristic: genotype

text: pollination

characteristic: initial time point

text: Zea mays

characteristic: organism

text: seed (EFO_0000991)

characteristic: organism part

text: Zea mays


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ENA

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: 20 day

text: age

text: genotype

text: organism part

text: CML103 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


characteristic: ENA-LAST-UPDATE

text: ENA

characteristic: INSDC last update

text: public

text: 24 day

text: age

text: genotype

text: organism part

text: CML103 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

characteristic: recurated from

text: Zea mays

characteristic: title


characteristic: External Id

text: ENA

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 30 day

text: age

text: genotype

text: organism part

text: CML103 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


text: ENA

text: public

text: 36 day

characteristic: age

text: age

characteristic: experimental factor 1

text: genotype

characteristic: experimental factor 2

text: organism part

characteristic: experimental factor 3

text: CML103 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


text: ENA

text: public

text: 16 day

text: age

text: genotype

text: organism part

text: CML228 line

characteristic: genotype

text: pollination

characteristic: initial time point

text: Zea mays

characteristic: organism

text: seed (EFO_0000991)

characteristic: organism part

text: Zea mays


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ENA

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: 20 day

text: age

text: genotype

text: organism part

text: CML228 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


characteristic: ENA-LAST-UPDATE

text: ENA

characteristic: INSDC last update

text: public

text: 12 day

text: age

text: genotype

text: organism part

text: CML247 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

characteristic: recurated from

text: Zea mays

characteristic: title


characteristic: External Id

text: ENA

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 16 day

text: age

text: genotype

text: organism part

text: CML247 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


text: ENA

text: public

text: 20 day

characteristic: age

text: age

characteristic: experimental factor 1

text: genotype

characteristic: experimental factor 2

text: organism part

characteristic: experimental factor 3

text: CML247 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


text: ENA

text: public

text: 24 day

text: age

text: genotype

text: organism part

text: CML247 line

characteristic: genotype

text: pollination

characteristic: initial time point

text: Zea mays

characteristic: organism

text: seed (EFO_0000991)

characteristic: organism part

text: Zea mays


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ENA

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: 30 day

text: age

text: genotype

text: organism part

text: CML247 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


characteristic: ENA-LAST-UPDATE

text: ENA

characteristic: INSDC last update

text: public

text: 36 day

text: age

text: genotype

text: organism part

text: CML247 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

characteristic: recurated from

text: Zea mays

characteristic: title


characteristic: External Id

text: ENA

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 12 day

text: age

text: genotype

text: organism part

text: CML277 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


text: ENA

text: public

text: 16 day

characteristic: age

text: age

characteristic: experimental factor 1

text: genotype

characteristic: experimental factor 2

text: organism part

characteristic: experimental factor 3

text: CML277 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


text: ENA

text: public

text: 20 day

text: age

text: genotype

text: organism part

text: CML277 line

characteristic: genotype

text: pollination

characteristic: initial time point

text: Zea mays

characteristic: organism

text: seed (EFO_0000991)

characteristic: organism part

text: Zea mays


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ENA

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: 24 day

text: age

text: genotype

text: organism part

text: CML277 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


characteristic: ENA-LAST-UPDATE

text: ENA

characteristic: INSDC last update

text: public

text: 30 day

text: age

text: genotype

text: organism part

text: CML277 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

characteristic: recurated from

text: Zea mays

characteristic: title


characteristic: External Id

text: ENA

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 36 day

text: age

text: genotype

text: organism part

text: CML277 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


text: ENA

text: public

text: 12 day

characteristic: age

text: age

characteristic: experimental factor 1

text: genotype

characteristic: experimental factor 2

text: organism part

characteristic: experimental factor 3

text: CML322 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


text: ENA

text: public

text: 16 day

text: age

text: genotype

text: organism part

text: CML322 line

characteristic: genotype

text: pollination

characteristic: initial time point

text: Zea mays

characteristic: organism

text: seed (EFO_0000991)

characteristic: organism part

text: Zea mays


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ENA

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: 20 day

text: age

text: genotype

text: organism part

text: CML322 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


characteristic: ENA-LAST-UPDATE

text: ENA

characteristic: INSDC last update

text: public

text: 24 day

text: age

text: genotype

text: organism part

text: CML322 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

characteristic: recurated from

text: Zea mays

characteristic: title


characteristic: External Id

text: ENA

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 30 day

text: age

text: genotype

text: organism part

text: CML322 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


text: ENA

text: public

text: 36 day

characteristic: age

text: age

characteristic: experimental factor 1

text: genotype

characteristic: experimental factor 2

text: organism part

characteristic: experimental factor 3

text: CML322 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


text: ENA

text: public

text: 12 day

text: age

text: genotype

text: organism part

text: CML333 line

characteristic: genotype

text: pollination

characteristic: initial time point

text: Zea mays

characteristic: organism

text: seed (EFO_0000991)

characteristic: organism part

text: Zea mays


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ENA

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: 16 day

text: age

text: genotype

text: organism part

text: CML333 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


characteristic: ENA-LAST-UPDATE

text: ENA

characteristic: INSDC last update

text: public

text: 24 day

text: age

text: genotype

text: organism part

text: CML333 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

characteristic: recurated from

text: Zea mays

characteristic: title


characteristic: External Id

text: ENA

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 30 day

text: age

text: genotype

text: organism part

text: CML333 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


text: ENA

text: public

text: 36 day

characteristic: age

text: age

characteristic: experimental factor 1

text: genotype

characteristic: experimental factor 2

text: organism part

characteristic: experimental factor 3

text: CML333 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


text: ENA

text: public

text: 12 day

text: age

text: genotype

text: organism part

text: CML52 line

characteristic: genotype

text: pollination

characteristic: initial time point

text: Zea mays

characteristic: organism

text: seed (EFO_0000991)

characteristic: organism part

text: Zea mays


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ENA

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: 16 day

text: age

text: genotype

text: organism part

text: CML52 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


characteristic: ENA-LAST-UPDATE

text: ENA

characteristic: INSDC last update

text: public

text: 20 day

text: age

text: genotype

text: organism part

text: CML52 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

characteristic: recurated from

text: Zea mays

characteristic: title


characteristic: External Id

text: ENA

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 24 day

text: age

text: genotype

text: organism part

text: CML52 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


text: ENA

text: public

text: 30 day

characteristic: age

text: age

characteristic: experimental factor 1

text: genotype

characteristic: experimental factor 2

text: organism part

characteristic: experimental factor 3

text: CML52 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


text: ENA

text: public

text: 36 day

text: age

text: genotype

text: organism part

text: CML52 line

characteristic: genotype

text: pollination

characteristic: initial time point

text: Zea mays

characteristic: organism

text: seed (EFO_0000991)

characteristic: organism part

text: Zea mays


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ENA

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: 12 day

text: age

text: genotype

text: organism part

text: CML69 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


characteristic: ENA-LAST-UPDATE

text: ENA

characteristic: INSDC last update

text: public

text: 16 day

text: age

text: genotype

text: organism part

text: CML69 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

characteristic: recurated from

text: Zea mays

characteristic: title


characteristic: External Id

text: ENA

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 24 day

text: age

text: genotype

text: organism part

text: CML69 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


text: ENA

text: public

text: 30 day

characteristic: age

text: age

characteristic: experimental factor 1

text: genotype

characteristic: experimental factor 2

text: organism part

characteristic: experimental factor 3

text: CML69 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


text: ENA

text: public

text: 12 day

text: age

text: genotype

text: organism part

text: Hp301 line

characteristic: genotype

text: pollination

characteristic: initial time point

text: Zea mays

characteristic: organism

text: seed (EFO_0000991)

characteristic: organism part

text: Zea mays


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ENA

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: 16 day

text: age

text: genotype

text: organism part

text: Hp301 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


characteristic: ENA-LAST-UPDATE

text: ENA

characteristic: INSDC last update

text: public

text: 20 day

text: age

text: genotype

text: organism part

text: Hp301 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

characteristic: recurated from

text: Zea mays

characteristic: title


characteristic: External Id

text: ENA

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 24 day

text: age

text: genotype

text: organism part

text: Hp301 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


text: ENA

text: public

text: 30 day

characteristic: age

text: age

characteristic: experimental factor 1

text: genotype

characteristic: experimental factor 2

text: organism part

characteristic: experimental factor 3

text: Hp301 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


text: ENA

text: public

text: 36 day

text: age

text: genotype

text: organism part

text: Hp301 line

characteristic: genotype

text: pollination

characteristic: initial time point

text: Zea mays

characteristic: organism

text: seed (EFO_0000991)

characteristic: organism part

text: Zea mays


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ENA

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: 12 day

text: age

text: genotype

text: organism part

text: Il14H line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


characteristic: ENA-LAST-UPDATE

text: ENA

characteristic: INSDC last update

text: public

text: 16 day

text: age

text: genotype

text: organism part

text: Il14H line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

characteristic: recurated from

text: Zea mays

characteristic: title


characteristic: External Id

text: ENA

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 20 day

text: age

text: genotype

text: organism part

text: Il14H line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


text: ENA

text: public

text: 24 day

characteristic: age

text: age

characteristic: experimental factor 1

text: genotype

characteristic: experimental factor 2

text: organism part

characteristic: experimental factor 3

text: Il14H line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


text: ENA

text: public

text: 30 day

text: age

text: genotype

text: organism part

text: Il14H line

characteristic: genotype

text: pollination

characteristic: initial time point

text: Zea mays

characteristic: organism

text: seed (EFO_0000991)

characteristic: organism part

text: Zea mays


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ENA

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: 36 day

text: age

text: genotype

text: organism part

text: Il14H line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


characteristic: ENA-LAST-UPDATE

text: ENA

characteristic: INSDC last update

text: public

text: 12 day

text: age

text: genotype

text: organism part

text: Ki3 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

characteristic: recurated from

text: Zea mays

characteristic: title


characteristic: External Id

text: ENA

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 16 day

text: age

text: genotype

text: organism part

text: Ki3 line

text: pollination

text: Zea mays

text: seed (EFO_0000991)

text: Zea mays


text: ENA

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characteristic: ENA-LAST-UPDATE

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characteristic: recurated from

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characteristic: External Id

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characteristic: ENA-LAST-UPDATE

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characteristic: External Id

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characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

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characteristic: External Id

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text: organism part

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text: ENA

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characteristic: ENA-LAST-UPDATE

text: ENA

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text: public

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text: Zea mays

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characteristic: External Id

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text: 24 day

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text: organism part

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text: ENA

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text: ENA

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characteristic: ENA-CHECKLIST

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characteristic: INSDC center name

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text: public

text: 12 day

text: age

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text: organism part

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characteristic: ENA-LAST-UPDATE

text: ENA

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text: Zea mays

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characteristic: recurated from

text: Zea mays

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characteristic: External Id

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text: 20 day

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text: genotype

text: organism part

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text: ENA

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text: ENA

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text: Zea mays

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text: public

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text: age

text: genotype

text: organism part

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text: Zea mays

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characteristic: ENA-LAST-UPDATE

text: ENA

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text: organism part

text: MS71 line

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characteristic: External Id

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text: 16 day

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text: genotype

text: organism part

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text: ENA

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text: ENA

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characteristic: ENA-CHECKLIST

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text: public

text: 30 day

text: age

text: genotype

text: organism part

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text: Zea mays

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characteristic: ENA-LAST-UPDATE

text: ENA

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text: age

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text: Zea mays

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characteristic: recurated from

text: Zea mays

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characteristic: External Id

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text: 12 day

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text: organism part

text: NC350 line

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text: public

text: 24 day

text: age

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characteristic: ENA-LAST-UPDATE

text: ENA

characteristic: INSDC last update

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text: genotype

text: organism part

text: NC350 line

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characteristic: recurated from

text: Zea mays

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characteristic: External Id

text: ENA

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text: 36 day

text: age

text: genotype

text: organism part

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text: ENA

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text: Oh43 line

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characteristic: ENA-LAST-UPDATE

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characteristic: External Id

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text: 30 day

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characteristic: ENA-CHECKLIST

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characteristic: INSDC center name

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characteristic: ENA-LAST-UPDATE

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characteristic: INSDC last update

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text: organism part

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characteristic: ENA-LAST-UPDATE

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characteristic: ENA-LAST-UPDATE

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characteristic: ENA-LAST-UPDATE

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text: organism part

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characteristic: ENA-LAST-UPDATE

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characteristic: External Id

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text: genotype

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text: organism part

text: CML103 line

text: Zea mays

text: shoot (EFO_0000992)

text: Zea mays


text: ENA

text: public

text: not applicable not applicable

text: age

text: genotype

text: organism part

characteristic: experimental factor 3

text: CML247 line

characteristic: genotype

text: Zea mays

characteristic: organism

text: root (EFO_0000989)

text: Zea mays


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ENA

text: public

text: not applicable not applicable

text: age

text: genotype

text: organism part

text: CML247 line

text: Zea mays

text: shoot (EFO_0000992)

characteristic: organism part

text: Zea mays


characteristic: ENA-LAST-UPDATE

text: ENA

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: not applicable not applicable

text: age

text: genotype

text: organism part

text: CML277 line

text: Zea mays

text: root (EFO_0000989)

text: Zea mays


characteristic: External Id

text: ENA

characteristic: INSDC last update

text: public

text: not applicable not applicable

text: age

text: genotype

text: organism part

text: CML277 line

text: Zea mays

text: shoot (EFO_0000992)

characteristic: recurated from

text: Zea mays


text: ENA

text: public

characteristic: INSDC status

characteristic: SRA accession

text: not applicable not applicable

text: age

text: genotype

text: organism part

text: CML322 line

text: Zea mays

text: root (EFO_0000989)

text: Zea mays

characteristic: title


text: ENA

text: public

characteristic: Submitter Id

text: not applicable not applicable

characteristic: age

text: age

characteristic: experimental factor 1

text: genotype

text: organism part

text: CML322 line

text: Zea mays

text: shoot (EFO_0000992)

text: Zea mays


text: ENA

text: public

text: not applicable not applicable

text: age

text: genotype

characteristic: experimental factor 2

text: organism part

characteristic: experimental factor 3

text: CML52 line

characteristic: genotype

text: Zea mays

text: root (EFO_0000989)

text: Zea mays


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ENA

text: public

text: not applicable not applicable

text: age

text: genotype

text: organism part

text: CML52 line

text: Zea mays

characteristic: organism

text: shoot (EFO_0000992)

text: Zea mays


characteristic: ENA-LAST-UPDATE

text: ENA

characteristic: INSDC center name

text: public

text: not applicable not applicable

text: age

text: genotype

text: organism part

text: CML69 line

text: Zea mays

text: root (EFO_0000989)

characteristic: organism part

text: Zea mays


characteristic: External Id

text: ENA

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: not applicable not applicable

text: age

text: genotype

text: organism part

text: CML69 line

text: Zea mays

text: shoot (EFO_0000992)

text: Zea mays


text: ENA

text: public

characteristic: INSDC status

characteristic: SRA accession

text: not applicable not applicable

text: age

text: genotype

text: organism part

text: Hp301 line

text: Zea mays

text: shoot (EFO_0000992)

characteristic: recurated from

text: Zea mays


text: ENA

text: public

characteristic: Submitter Id

text: not applicable not applicable

characteristic: age

text: age

text: genotype

text: organism part

text: Ky21 line

text: Zea mays

text: root (EFO_0000989)

text: Zea mays

characteristic: title


text: ENA

text: public

text: not applicable not applicable

text: age

characteristic: experimental factor 1

text: genotype

characteristic: experimental factor 2

text: organism part

characteristic: experimental factor 3

text: Ky21 line

text: Zea mays

text: shoot (EFO_0000992)

text: Zea mays


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ENA

text: public

text: not applicable not applicable

text: age

text: genotype

text: organism part

text: M37W line

characteristic: genotype

text: Zea mays

text: root (EFO_0000989)

text: Zea mays


characteristic: ENA-LAST-UPDATE

text: ENA

characteristic: INSDC center name

text: public

text: not applicable not applicable

text: age

text: genotype

text: organism part

text: M37W line

text: Zea mays

characteristic: organism

text: shoot (EFO_0000992)

text: Zea mays


characteristic: External Id

text: ENA

characteristic: INSDC first public

text: public

text: not applicable not applicable

text: age

text: genotype

text: organism part

text: Mo18W line

text: Zea mays

text: shoot (EFO_0000992)

characteristic: organism part

text: Zea mays


text: ENA

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: not applicable not applicable

text: age

text: genotype

text: organism part

text: MS71 line

text: Zea mays

text: root (EFO_0000989)

text: Zea mays


text: ENA

text: public

characteristic: Submitter Id

text: not applicable not applicable

characteristic: age

text: age

text: genotype

text: organism part

text: MS71 line

text: Zea mays

text: shoot (EFO_0000992)

characteristic: recurated from

text: Zea mays


text: ENA

text: public

text: not applicable not applicable

text: age

characteristic: experimental factor 1

text: genotype

characteristic: experimental factor 2

text: organism part

text: NC350 line

text: Zea mays

text: root (EFO_0000989)

text: Zea mays

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ENA

text: public

text: not applicable not applicable

text: age

text: genotype

text: organism part

characteristic: experimental factor 3

text: NC350 line

text: Zea mays

text: shoot (EFO_0000992)

text: Zea mays


characteristic: ENA-LAST-UPDATE

text: ENA

characteristic: INSDC center name

text: public

text: not applicable not applicable

text: age

text: genotype

text: organism part

text: NC358 line

characteristic: genotype

text: Zea mays

text: root (EFO_0000989)

text: Zea mays


characteristic: External Id

text: ENA

characteristic: INSDC first public

text: public

text: not applicable not applicable

text: age

text: genotype

text: organism part

text: NC358 line

text: Zea mays

characteristic: organism

text: shoot (EFO_0000992)

text: Zea mays


text: ENA

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: not applicable not applicable

text: age

text: genotype

text: organism part

text: Oh43 line

text: Zea mays

text: root (EFO_0000989)

characteristic: organism part

text: Zea mays


text: ENA

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: not applicable not applicable

characteristic: age

text: age

text: genotype

text: organism part

text: Oh43 line

text: Zea mays

text: shoot (EFO_0000992)

text: Zea mays


text: ENA

text: public

text: not applicable not applicable

text: age

characteristic: experimental factor 1

text: genotype

characteristic: experimental factor 2

text: organism part

text: Oh7B line

text: Zea mays

text: shoot (EFO_0000992)

characteristic: recurated from

text: Zea mays


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ENA

text: public

text: not applicable not applicable

text: age

text: genotype

text: organism part

text: P39 line

text: Zea mays

text: root (EFO_0000989)

text: Zea mays

characteristic: title


characteristic: ENA-LAST-UPDATE

text: ENA

characteristic: INSDC center name

text: public

text: not applicable not applicable

text: age

text: genotype

text: organism part

characteristic: experimental factor 3

text: P39 line

text: Zea mays

text: shoot (EFO_0000992)

text: Zea mays


characteristic: External Id

text: ENA

characteristic: INSDC first public

text: public

text: not applicable not applicable

text: age

text: genotype

text: organism part

text: Tx303 line

characteristic: genotype

text: Zea mays

text: root (EFO_0000989)

text: Zea mays


text: ENA

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: not applicable not applicable

text: age

text: genotype

text: organism part

text: Tx303 line

text: Zea mays

characteristic: organism

text: shoot (EFO_0000992)

text: Zea mays


text: ENA

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: not applicable not applicable

text: age

text: genotype

text: organism part

text: Tzi8 line

text: Zea mays

text: root (EFO_0000989)

characteristic: organism part

text: Zea mays


text: ENA

text: public

text: not applicable not applicable

characteristic: age

text: age

characteristic: experimental factor 1

text: genotype

characteristic: experimental factor 2

text: organism part

text: Tzi8 line

text: Zea mays

text: shoot (EFO_0000992)

text: Zea mays


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ENA

text: public

text: 12 day

text: age

text: genotype

text: organism part

text: CML228 line

text: pollination

characteristic: initial time point

text: Zea mays

text: seed (EFO_0000991)

characteristic: recurated from

text: Zea mays


characteristic: ENA-LAST-UPDATE

text: ENA

characteristic: INSDC center name

text: public

text: not applicable not applicable

text: age

text: genotype

text: organism part

characteristic: experimental factor 3

text: CML228 line

text: Zea mays

text: root (EFO_0000989)

text: Zea mays

characteristic: title


characteristic: External Id

text: ENA

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: not applicable not applicable

text: age

text: genotype

text: organism part

text: CML228 line

characteristic: genotype

text: Zea mays

text: shoot (EFO_0000992)

text: Zea mays


text: ENA

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: not applicable not applicable

text: age

text: genotype

text: organism part

text: Hp301 line

text: Zea mays

characteristic: organism

text: root (EFO_0000989)

text: Zea mays


text: ENA

text: public

text: not applicable not applicable

characteristic: age

text: age

characteristic: experimental factor 1

text: genotype

characteristic: experimental factor 2

text: organism part

text: Il14H line

text: Zea mays

text: root (EFO_0000989)

characteristic: organism part

text: Zea mays


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ENA

text: public

text: not applicable not applicable

text: age

text: genotype

text: organism part

text: Il14H line

text: Zea mays

text: shoot (EFO_0000992)

characteristic: recurated from

text: Zea mays


characteristic: ENA-LAST-UPDATE

text: ENA

characteristic: INSDC center name

text: public

text: not applicable not applicable

text: age

text: genotype

text: organism part

characteristic: experimental factor 3

text: Mo18W line

text: Zea mays

text: root (EFO_0000989)

text: Zea mays


characteristic: External Id

text: ENA

characteristic: INSDC first public

text: public

text: not applicable not applicable

text: age

text: genotype

text: organism part

text: Oh7B line

text: Zea mays

text: root (EFO_0000989)

text: Zea mays

characteristic: title


text: ENA

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: rice

characteristic: common name

text: SE.00 stem elongation begins stage

characteristic: dev stage

text: genotype

text: CRMS31A parental line

characteristic: genotype

text: Oryza sativa

text: leaf (EFO_0000993)

text: Oryza sativa


text: ENA

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: rice

text: SE.00 stem elongation begins stage

characteristic: experimental factor 1

text: genotype

text: IR-42266-29-3R common restorer line

text: Oryza sativa

characteristic: organism

text: leaf (EFO_0000993)

text: Oryza sativa


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ENA

text: public

text: rice

text: SE.00 stem elongation begins stage

text: genotype

characteristic: experimental factor 2

text: Ajay hybrid

text: Oryza sativa

text: leaf (EFO_0000993)

characteristic: organism part

text: Oryza sativa


characteristic: ENA-LAST-UPDATE

text: ENA

characteristic: INSDC center name

text: public

text: rice

text: SE.00 stem elongation begins stage

text: genotype

text: Rajalaxmi hybrid

text: Oryza sativa

text: leaf (EFO_0000993)

characteristic: recurated from

text: Oryza sativa


characteristic: External Id

text: ENA

characteristic: INSDC first public

text: public

text: rice

text: developing seed stage

text: genotype

text: CRMS31A parental line

text: Oryza sativa

text: leaf (EFO_0000993)

text: Oryza sativa

characteristic: title


text: ENA

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: rice

characteristic: common name

text: developing seed stage

text: genotype

text: CRMS32A parental line

text: Oryza sativa

text: leaf (EFO_0000993)

text: Oryza sativa


text: ENA

text: public

characteristic: SRA accession

text: rice

text: developing seed stage

characteristic: dev stage

text: genotype

text: IR-42266-29-3R common restorer line

characteristic: genotype

text: Oryza sativa

text: leaf (EFO_0000993)

text: Oryza sativa


text: ENA

text: public

characteristic: Submitter Id

text: rice

text: developing seed stage

characteristic: experimental factor 1

text: genotype

text: Rajalaxmi hybrid

text: Oryza sativa

characteristic: organism

text: leaf (EFO_0000993)

text: Oryza sativa


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ENA

text: public

text: rice

text: developing seed stage

text: genotype

characteristic: experimental factor 2

text: Ajay hybrid

text: Oryza sativa

text: leaf (EFO_0000993)

text: Oryza sativa


characteristic: ENA-LAST-UPDATE

text: ENA

characteristic: INSDC center name

text: public

text: rice

text: SE.00 stem elongation begins stage

text: genotype

text: CRMS32A parental line

text: Oryza sativa

text: leaf (EFO_0000993)

characteristic: organism part

text: Oryza sativa


characteristic: External Id

text: ENA

characteristic: INSDC first public

text: public

text: rice

text: SE.00 stem elongation begins stage

text: genotype

text: maintainer line for Ajay

text: Oryza sativa

text: leaf (EFO_0000993)

characteristic: recurated from

text: Oryza sativa


text: ENA

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: rice

text: SE.00 stem elongation begins stage

text: genotype

text: maintainer line for Rajalaxmi

text: Oryza sativa

text: leaf (EFO_0000993)

text: Oryza sativa

characteristic: title


text: ENA

text: public

characteristic: SRA accession

text: thale cress

characteristic: common name

text: seedling

characteristic: dev stage

text: Col-0 (EFO_0005148)

characteristic: ecotype

text: control (EFO_0001461)

characteristic: environmental stress

text: environmental stress

text: genotype

text: upf1-1 mutant

text: Arabidopsis thaliana

text: whole organism (EFO_0002906)

text: Arabidopsis thaliana


characteristic: ENA-CHECKLIST

text: ENA

text: public

characteristic: Submitter Id

text: thale cress

text: seedling

text: Col-0 (EFO_0005148)

text: control (EFO_0001461)

text: environmental stress

characteristic: experimental factor 1

text: genotype

text: wild type genotype

characteristic: genotype

text: Arabidopsis thaliana

characteristic: organism

text: whole organism (EFO_0002906)

text: Arabidopsis thaliana


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: ENA

characteristic: INSDC center name

text: public

text: thale cress

text: seedling

text: Col-0 (EFO_0005148)

text: control (EFO_0001461)

text: environmental stress

text: genotype

characteristic: experimental factor 2

text: upf1-5 mutant

text: Arabidopsis thaliana

text: whole organism (EFO_0002906)

characteristic: organism part

text: Arabidopsis thaliana


characteristic: External Id

text: ENA

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: thale cress

text: seedling

text: Col-0 (EFO_0005148)

text: warm/hot temperature regimen

text: environmental stress

text: genotype

text: wild type genotype

text: Arabidopsis thaliana

text: whole organism (EFO_0002906)

characteristic: recurated from

text: Arabidopsis thaliana


text: ENA

text: public

characteristic: SRA accession

text: thale cress

characteristic: common name

text: seedling

characteristic: dev stage

text: Col-0 (EFO_0005148)

characteristic: ecotype

text: warm/hot temperature regimen

text: environmental stress

text: genotype

text: upf1-5 mutant

text: Arabidopsis thaliana

text: whole organism (EFO_0002906)

text: Arabidopsis thaliana

characteristic: title


characteristic: ENA-CHECKLIST

text: ENA

text: public

characteristic: Submitter Id

text: rice

text: LP.03 three leaves visible stage

text: genotype

characteristic: experimental factor 1

text: infect

text: time

characteristic: experimental factor 3

text: 93-11 parent line

characteristic: genotype

text: control (EFO_0001461)

characteristic: infect

text: Oryza sativa

text: stem (EFO_0001040)

text: susceptible to Nilaparvata lugens

characteristic: phenotype

text: Oryza sativa

text: 0 hour

characteristic: time


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ENA

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: rice

text: LP.03 three leaves visible stage

text: genotype

text: infect

characteristic: experimental factor 2

text: time

text: 93-11 parent line

text: Nilaparvata lugens

text: Oryza sativa

characteristic: organism

text: stem (EFO_0001040)

characteristic: organism part

text: susceptible to Nilaparvata lugens

text: Oryza sativa

text: 6 hour


text: ENA

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: rice

characteristic: common name

text: LP.03 three leaves visible stage

characteristic: dev stage

text: genotype

text: infect

text: time

text: 93-11 parent line

text: Nilaparvata lugens

text: Oryza sativa

text: stem (EFO_0001040)

text: susceptible to Nilaparvata lugens

characteristic: recurated from

text: Oryza sativa

text: 48 hour

characteristic: title


characteristic: ENA-CHECKLIST

text: ENA

text: public

characteristic: Submitter Id

text: rice

text: LP.03 three leaves visible stage

text: genotype

characteristic: experimental factor 1

text: infect

text: time

characteristic: experimental factor 3

text: 93-11(15) introgression line

characteristic: genotype

text: control (EFO_0001461)

characteristic: infect

text: Oryza sativa

text: stem (EFO_0001040)

text: resistant to Nilaparvata lugens

characteristic: phenotype

text: Oryza sativa

text: 0 hour


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ENA

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: 14 day

characteristic: age

text: Japanese rice

text: Nipponbare (EFO_0007587)

characteristic: cultivar

text: seedling

text: drought environment

characteristic: environmental stress

text: environmental stress

text: protocol

characteristic: experimental factor 2

text: Oryza sativa Japonica Group

text: whole organism (EFO_0002906)

text: RNA-seq of non coding RNA (EFO_0003737)

characteristic: protocol

text: Oryza sativa Japonica Group


characteristic: ENA-CHECKLIST

text: ENA

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 14 day

text: Japanese rice

characteristic: common name

text: Nipponbare (EFO_0007587)

text: seedling

characteristic: dev stage

text: salt treatment

text: environmental stress

text: protocol

text: Oryza sativa Japonica Group

characteristic: organism

text: whole organism (EFO_0002906)

characteristic: organism part

text: RNA-seq of non coding RNA (EFO_0003737)

characteristic: recurated from

text: Oryza sativa Japonica Group

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ENA

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: 14 day

text: Japanese rice

text: Nipponbare (EFO_0007587)

text: seedling

text: none (EFO_0001461)

text: environmental stress

characteristic: experimental factor 1

text: protocol

text: Oryza sativa Japonica Group

text: whole organism (EFO_0002906)

text: RNA-seq of non coding RNA (EFO_0003737)

text: Oryza sativa Japonica Group


text: ENA

characteristic: INSDC first public

text: public

text: 10 day

characteristic: age

text: bread wheat

text: Cadenza

characteristic: cultivar

text: age

text: whole plant flowering stage

characteristic: initial time point

text: Triticum aestivum

text: endosperm (EFO_0001020)

text: Triticum aestivum


characteristic: ENA-CHECKLIST

text: ENA

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 14 day

text: bread wheat

text: Cadenza

text: age

text: whole plant flowering stage

text: Triticum aestivum

text: endosperm (EFO_0001020)

text: Triticum aestivum


text: ENA

text: public

text: 17 day

text: bread wheat

characteristic: common name

text: Cadenza

text: age

text: whole plant flowering stage

text: Triticum aestivum

characteristic: organism

text: endosperm (EFO_0001020)

characteristic: organism part

text: Triticum aestivum


characteristic: ENA-FIRST-PUBLIC

text: ENA

text: public

text: 21 day

text: bread wheat

text: Cadenza

text: age

text: whole plant flowering stage

text: Triticum aestivum

text: endosperm (EFO_0001020)

characteristic: recurated from

text: Triticum aestivum

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ENA

characteristic: INSDC center name

text: public

text: 28 day

text: bread wheat

text: Cadenza

text: age

text: whole plant flowering stage

text: Triticum aestivum

text: endosperm (EFO_0001020)

text: Triticum aestivum


text: ENA

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Zheng58 inbred line

text: flowering stage

characteristic: dev stage

text: organism part

characteristic: experimental factor 1

text: Zea mays

text: plant ovary (EFO_0001052)

text: Zea mays


characteristic: ENA-CHECKLIST

text: ENA

text: public

text: Zheng58 inbred line

characteristic: cultivar

text: flowering stage

text: organism part

text: Zea mays

text: pollen

text: Zea mays


text: ENA

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Zheng58 inbred line

text: flowering stage

text: organism part

text: Zea mays

text: style

text: Zea mays


text: ENA

text: public

characteristic: SRA accession

text: Zheng58 inbred line

text: seedling

text: organism part

text: Zea mays

text: whole organism (EFO_0002906)

text: Zea mays


text: ENA

text: public

text: Zheng58 inbred line

text: flowering stage

text: organism part

text: Zea mays

characteristic: organism

text: immature style

text: Zea mays


text: Aggeu Magalhaes Research Center

text: public

tag: Namespace:Aggeu Magalhaes Research Center

characteristic: collection date

text: Brazil

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: Human

characteristic: host scientific name

characteristic: isolate

text: Hospital

characteristic: isolation source

text: Acinetobacter baumannii

text: Acinetobacter baumannii


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ESTACION BIOLOGICA DE DONANA

characteristic: INSDC center name

text: public

tag: Namespace:ESTACION BIOLOGICA DE DONANA

text: Spanish lynx

characteristic: common name

text: Lynx pardinus

text: Lynx pardinus

text: Lynx pardinus tissue sample

characteristic: title

type: has member


characteristic: ENA-CHECKLIST

text: University of Michigan

characteristic: INSDC first public

text: public

tag: Namespace:University of Michigan

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: colon adenoma organoid cell

characteristic: cell type

text: human

text: Protocols: Tissue was collected from subjects recruited through the Molecular Pathology and Biosample Core (MPBC) as part of the GI SPORE at the University of Michigan. Colonic tissue was acquired by endoscopy (adenomas) or from colonic resections (adenocarcinomas) and according to protocols approved by the University of Michigan Institutional Review Board (IRB; HUM00064405/0038437/00030020). Two growth media were used; the first for continuous culture and the second to drive to a cyst morphology. The first reduced medium (KGM-Gold) is a serum-free epithelial medium containing epidermal growth factor (EGF) and pituitary extract (KGMG; Lonza; 195769) with the antimicrobials 25μg/mL gentamicin (Invitrogen; 15750) and 50μg/mL Primocin (InvivoGen; ant-pm-1) and made to 0.15mM calcium with CaCl2 (PromCell). The second (L-WRN medium) contains high levels of Wnt3a, R-spondin-3 and Noggin provided by a conditioned medium from support L- cells as described by Miyoshi 3. The complete L-WRN medium further contained Advanced DMEM/F-12, 2mM GlutaMax, 10mM HEPES, N-2 media supplement, B-27 supplement minus vitamin A, 100 units/mL penicillin, 0.1 mg/mL streptomycin (all Invitrogen), 50μg/ml Primocin, 1mM N-Acetyl-L-cysteine (Sigma; A9165), and 100ng EGF/mL (R&D; 236-EG), as well as the addition of 10mM Nicotinamide (Sigma; N0636). To drive from a budding to cyst morphology, cultures are gradually switched from KGMG to L-WRN for three to four weeks (3 days KGMG, 5 days 50/50 L-WRN; 5 days 75/25; 100% L-WRN until predominately cystic). Consistent with previous reports, organoids formed cystic structures in the presence of Wnt ligand provided by L-WRN medium 4-8. Cultures were propagated in Matrigel (Corning; 354234) which was made to 8mg/mL in growth media on 6-well tissue culture plates (USA Scientific CytoOne; CC7682-7506). All plasticware, excluding culture plates, were coated in 0.1% bovine serum albumen in DPBS (Sigma; A8806) to prevent tissue/organoids/cells from adhering to surfaces. Cultures were passaged every 4-7 days by digesting Matrigel in cold 2mM EDTA in DPBS and plated the first day with the Rho-associated protein kinase (ROCK) inhibitor, Y27632 (10μM; Miltenyi; 130-104-169). On the day of sorting, the cultures were treated with 10μM Y27632 for 2.5 hrs prior to harvest. Matrigel was digested for 45 minutes with cold 2mM EDTA in DPBS and organoids were washed 3X with cold DPBS (100xg at 4C). Structures were dissociated into single cells using the Tumor Dissociation Kit (human) (Miltenyi Biotec; 130-095-929) with the protocol modifications described as follows. The enzymes were prepared in warm HBSS modified to 0.13mM calcium and 0.9mM magnesium [10% HBSS, calcium, magnesium, no phenol red (Life Technologies 14025092) with 90% HBSS, no calcium, no magnesium (Life Technologies 14170112)] to minimize differentiation of the epithelial cells while supporting enzymatic activity. The organoids were suspended in 20mL of enzyme solution containing 5μM Y27632, then transferred to two BSA-coated C-tubes (Miltenyi Biotec; 130-096-334) and dissociated with a gentleMACS Dissociator (Miltenyi; 130-093-235) using the program h_tumor_01, once at the onset and every 15 minutes for 1 hour, and finishing with two program runs. Between runs the suspension was slowly rotated at 37C. The cell suspension was then poured over a succession of cold BSA-coated cell strainers into 0.5% BSA-2mM EDTA-PBS: 100μm (Corning; DL 352360) to 40μm (Corning; DL 352340) to 20μm (CellTrics; 04-0042-2315). The cells were washed 3X in the 0.5% BSA-2mM EDTA-PBS and centrifuged for 5 minutes at 500xg. Cells were counted under trypan blue exclusion to estimate live cell number using a Countess Automated Cell Counter (Invitrogen; C10227). RNA was extracted from sorted cells using the RNeasy Micro Kit (Qiagen; 74004) with on column DNase digestion. RNA concentration and quality were determined using a Nanodrop (Thermo Scientific) and Bioanalyzer (Agilent). ). Due to the small number of cells following FACS sorting and corresponding low level of input RNA, we depleted ribosomal RNAs with RiboGone (Clontech; 634846) and prepared sequencing libraries utilizing the SMARTer Stranded RNA-Seq kit (Clontech) following the manufacturer’s recommended protocol.

characteristic: description

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: FTN (Flow Through LGR5 Negative)

characteristic: phenotype

text: Homo sapiens


text: University of Michigan

characteristic: INSDC last update

text: public

characteristic: INSDC status

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text: ArrayExpress

text: colon adenoma organoid cell

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: SortedNeg (Magnet bound, LGR5 negative by FACS)

text: Homo sapiens


characteristic: ENA-FIRST-PUBLIC

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text: University of Michigan

text: public

text: ArrayExpress

text: colon adenoma organoid cell

text: human

text: Homo sapiens

text: Homo sapiens

text: SortedPos (Magnet bound, LGR5 positive by FACS)

text: Homo sapiens


characteristic: External Id

text: UNIVERSITY OF BIRMINGHAM

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text: public

tag: Namespace:UNIVERSITY OF BIRMINGHAM

text: fruit fly

text: NURF301 ChIP-Seq s2

text: Drosophila melanogaster

text: Drosophila melanogaster


text: UNIVERSITY OF BIRMINGHAM

text: public

text: fruit fly

characteristic: common name

text: CP190 ChIP-Seq S2

text: Drosophila melanogaster

text: Drosophila melanogaster

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text: public

tag: Namespace:Institute of Medical Microbiology and Hospital Epidemiology

text: Recombinant clones of 26695 generated by single and multiple in vitro transformation events

text: Helicobacter pylori

text: Helicobacter pylori

text: Contig assembly of recombinant clones of Helicobacter pylori str. 26695


text: Institute of Medical Microbiology and Hospital Epidemiology

text: public

characteristic: Submitter Id

text: Helicobacter pylori

text: Helicobacter pylori


text: UNIVERSITY OF BIRMINGHAM

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text: Input for NURF301 ChIP-Seq

text: Drosophila melanogaster

text: Drosophila melanogaster


text: UNIVERSITY OF BIRMINGHAM

text: public

text: fruit fly

text: Input for CP190 ChIP-Seq

text: Drosophila melanogaster

text: Drosophila melanogaster


text: Centre for Food Safety

text: public

tag: Namespace:Centre for Food Safety

text: Escherichia coli

text: Escherichia coli

text: E coli 26R 793


text: DTU-GE

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text: sam_103239_20160518_DTU2016_546_PRJ1055_ESchericha_coli_15078257

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characteristic: genus

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text: other (non-clinical isolate)

characteristic: host

text: Sus scrofa domesticus

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: No

characteristic: note

text: Escherichia coli

text: Escherichia coli

type: AMR curated data - CABBAGE

value: sulfamethoxazole

value: EUCAST

value: broth dilution

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value: tetracycline

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value: chloramphenicol

value: azithromycin

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value: cefoxitin

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text: Yes

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text: Yes

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text: Yes

text: No

text: Escherichia coli

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text: DTU-GE

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text: sam_103239_20160518_DTU2016_550_PRJ1055_ESchericha_coli_15078279

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text: other (non-clinical isolate)

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text: Sus scrofa domesticus

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text: Yes

text: No

text: Escherichia coli

text: Escherichia coli

value: EU

value: ceftazidime-clavulanic acid

value: gentamicin

value: ciprofloxacin

value: ampicillin

value: azithromycin


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text: DTU-GE

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text: Denmark

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text: Sus scrofa domesticus

text: Yes

characteristic: is the sequenced pathogen host associated?

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text: No

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text: Escherichia coli

text: Escherichia coli

value: cefoxitin

value: EUCAST

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text: Yes

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value: imipenem


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text: Yes

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text: Denmark

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text: Sus scrofa domesticus

text: Yes

characteristic: is the sequenced pathogen host associated?

text: No

text: Escherichia coli

text: Escherichia coli

value: chloramphenicol

value: mg/L

value: Sensititre

value: Escherichia coli

value: cefoxitin

value: nalidixic acid

value: tetracycline


characteristic: ENA-LAST-UPDATE

text: DTU-GE

characteristic: INSDC last update

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text: Denmark

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text: Sus scrofa domesticus

text: Yes

characteristic: isolate

text: No

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text: Escherichia coli

text: Escherichia coli

value: susceptible

value: ceftazidime

value: resistant

value: EU

value: colistin

value: imipenem

value: azithromycin


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text: DTU-GE

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text: sam_103239_20160518_DTU2016_558_PRJ1055_ESchericha_coli_15108573

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text: Escherichia

text: Denmark

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text: Sus scrofa domesticus

text: Yes

text: No

text: Escherichia coli

text: Escherichia coli

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value: broth dilution

value: ciprofloxacin

value: meropenem

value: ceftazidime-clavulanic acid


text: DTU-GE

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text: DTU-GE

text: Denmark

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text: Yes

text: No

text: Escherichia coli

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text: Escherichia coli


text: DTU-GE

text: public

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text: sam_103239_20160518_DTU2016_560_PRJ1055_ESchericha_coli_15079197

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text: Escherichia

text: Denmark

characteristic: geographic location (country and/or sea)

text: other (non-clinical isolate)

text: Bos primigenius

characteristic: host scientific name

text: Yes

text: No

text: Escherichia coli

text: Escherichia coli

value: mg/L

value: Sensititre

value: trimethoprim

value: sulfamethoxazole

value: tigecycline

value: ampicillin


characteristic: ENA-FIRST-PUBLIC

text: DTU-GE

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text: Denmark

text: other (non-clinical isolate)

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text: Bos primigenius

text: Yes

characteristic: is the sequenced pathogen host associated?

text: No

text: Escherichia coli

text: Escherichia coli

value: cefotaxime

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value: susceptible

value: tetracycline

value: cefoxitin

value: nalidixic acid

value: ceftazidime


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text: DTU-GE

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text: public

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text: Denmark

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text: Sus scrofa domesticus

text: Yes

characteristic: isolate

text: No

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text: Escherichia coli

text: Escherichia coli

value: EUCAST

value: broth dilution

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value: gentamicin

value: EU

value: chloramphenicol


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text: DTU-GE

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text: sam_103239_20160518_DTU2016_563_PRJ1055_ESchericha_coli_15079951

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text: Denmark

text: Sus scrofa domesticus

text: Yes

text: No

text: Escherichia coli

text: Escherichia coli


text: DTU-GE

characteristic: INSDC center name

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text: public

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text: sam_103239_20160518_DTU2016_564_PRJ1055_ESchericha_coli_15093354

characteristic: Submitter Id

text: DTU-GE

text: Escherichia

text: Denmark

text: other (non-clinical isolate)

text: Sus scrofa domesticus

text: Yes

text: No

text: Escherichia coli

characteristic: organism

text: Escherichia coli

value: azithromycin

value: mg/L

value: Sensititre

value: colistin

value: meropenem

value: imipenem


text: DTU-GE

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characteristic: broker name

characteristic: collection date

text: Escherichia

text: Denmark

characteristic: geographic location (country and/or sea)

text: other (non-clinical isolate)

text: Sus scrofa domesticus

characteristic: host scientific name

text: Yes

text: No

text: Escherichia coli

text: Escherichia coli

value: cefotaxime

value: Escherichia coli

value: ceftazidime-clavulanic acid

value: susceptible

value: ampicillin

value: sulfamethoxazole

value: trimethoprim


characteristic: ENA-FIRST-PUBLIC

text: DTU-GE

text: public

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text: sam_103239_20160518_DTU2016_566_PRJ1055_ESchericha_coli_15097577

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characteristic: genus

text: Denmark

text: other (non-clinical isolate)

characteristic: host

text: Sus scrofa domesticus

text: Yes

characteristic: is the sequenced pathogen host associated?

text: No

text: Escherichia coli

text: Escherichia coli

value: EUCAST

value: broth dilution

value: tigecycline

value: ciprofloxacin

value: nalidixic acid

value: tetracycline


characteristic: ENA-LAST-UPDATE

text: DTU-GE

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text: public

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text: sam_103239_20160518_DTU2016_567_PRJ1055_ESchericha_coli_15102768

text: DTU-GE

text: Escherichia

text: Denmark

text: other (non-clinical isolate)

text: Bos primigenius

text: Yes

characteristic: isolate

text: No

characteristic: note

text: Escherichia coli

text: Escherichia coli

value: EU

value: mg/L

value: Sensititre

value: azithromycin

value: chloramphenicol

value: ceftazidime

value: resistant

value: cefoxitin


characteristic: ENA-CHECKLIST

characteristic: External Id

text: DTU-GE

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text: DNK

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text: sam_103239_20160518_DTU2016_568_PRJ1055_ESchericha_coli_15090208

text: DTU-GE

text: Escherichia

text: Denmark

text: other (non-clinical isolate)

text: Sus scrofa domesticus

text: Yes

text: No

text: Escherichia coli

text: Escherichia coli

value: Escherichia coli

value: susceptible

value: cefotaxime

value: imipenem

value: ceftazidime-clavulanic acid

value: colistin


text: DTU-GE

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characteristic: Submitter Id

text: DTU-GE

text: Escherichia

text: Denmark

text: other (non-clinical isolate)

text: Sus scrofa domesticus

text: Yes

text: No

text: Escherichia coli

characteristic: organism

text: Escherichia coli

value: broth dilution

value: EUCAST

value: meropenem

value: trimethoprim

value: sulfamethoxazole

value: tigecycline


text: DTU-GE

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text: sam_103239_20160518_DTU2016_570_PRJ1055_ESchericha_coli_15090170

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characteristic: broker name

characteristic: collection date

text: Denmark

characteristic: geographic location (country and/or sea)

text: Sus scrofa domesticus

characteristic: host scientific name

text: Yes

text: No

text: Escherichia coli

text: Escherichia coli


characteristic: ENA-FIRST-PUBLIC

text: DTU-GE

text: public

text: sam_103239_20160518_DTU2016_571_PRJ1055_ESchericha_coli_15080678

text: DTU-GE

text: Denmark

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text: Yes

characteristic: is the sequenced pathogen host associated?

text: No

text: Escherichia coli

text: Escherichia coli


characteristic: ENA-LAST-UPDATE

text: DTU-GE

characteristic: INSDC last update

text: public

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text: sam_103239_20160518_DTU2016_572_PRJ1055_ESchericha_coli_15093352

text: DTU-GE

text: Escherichia

characteristic: genus

text: Denmark

text: other (non-clinical isolate)

characteristic: host

text: Sus scrofa domesticus

text: Yes

text: No

text: Escherichia coli

text: Escherichia coli

value: nalidixic acid

value: EU

value: mg/L

value: Sensititre

value: ciprofloxacin

value: ampicillin

value: gentamicin


characteristic: ENA-CHECKLIST

characteristic: External Id

text: DTU-GE

text: public

text: DNK

text: sam_103239_20160518_DTU2016_573_PRJ1055_ESchericha_coli_15093651

text: DTU-GE

text: Escherichia

text: Denmark

text: other (non-clinical isolate)

text: Sus scrofa domesticus

text: Yes

characteristic: isolate

text: No

characteristic: note

text: Escherichia coli

text: Escherichia coli

value: resistant

value: Escherichia coli

value: tetracycline

value: azithromycin

value: cefotaxime

value: susceptible

value: ceftazidime


text: DTU-GE

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text: DTU-GE

text: Denmark

text: Bos primigenius

text: Yes

text: No

text: Escherichia coli

text: Escherichia coli


text: DTU-GE

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characteristic: Submitter Id

text: DTU-GE

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characteristic: collection date

text: Escherichia

text: Denmark

text: other (non-clinical isolate)

text: Sus scrofa domesticus

text: Yes

text: No

text: Escherichia coli

characteristic: organism

text: Escherichia coli

value: broth dilution

value: EUCAST

value: ceftazidime-clavulanic acid

value: colistin

value: meropenem

value: cefoxitin

value: chloramphenicol


characteristic: ENA-FIRST-PUBLIC

text: DTU-GE

text: public

text: DNK

text: sam_103239_20160518_DTU2016_576_PRJ1055_ESchericha_coli_15097580

text: DTU-GE

text: Escherichia

text: Denmark

characteristic: geographic location (country and/or sea)

text: other (non-clinical isolate)

text: Sus scrofa domesticus

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: No

text: Escherichia coli

text: Escherichia coli

value: trimethoprim

value: mg/L

value: Sensititre

value: sulfamethoxazole

value: imipenem

value: nalidixic acid

value: EU

value: tigecycline


characteristic: ENA-LAST-UPDATE

text: DTU-GE

characteristic: INSDC last update

text: public

text: DNK

text: sam_103239_20160518_DTU2016_577_PRJ1055_ESchericha_coli_15097617

text: DTU-GE

text: Escherichia

characteristic: genus

text: Denmark

text: other (non-clinical isolate)

characteristic: host

text: Sus scrofa domesticus

text: Yes

text: No

text: Escherichia coli

text: Escherichia coli

value: resistant

value: Escherichia coli

value: susceptible

value: ciprofloxacin

value: cefotaxime

value: tetracycline


characteristic: ENA-CHECKLIST

characteristic: External Id

text: DTU-GE

text: public

text: DNK

text: sam_103239_20160518_DTU2016_578_PRJ1055_ESchericha_coli_15100418

text: DTU-GE

text: Escherichia

text: Denmark

text: other (non-clinical isolate)

text: Bos primigenius

text: Yes

characteristic: isolate

text: No

characteristic: note

text: Escherichia coli

text: Escherichia coli

value: ampicillin

value: broth dilution

value: ceftazidime-clavulanic acid

value: ceftazidime

value: EUCAST


text: DTU-GE

characteristic: INSDC center name

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characteristic: SRA accession

text: sam_103239_20160518_DTU2016_579_PRJ1055_ESchericha_coli_15101403

text: DTU-GE

text: Escherichia

text: Denmark

text: other (non-clinical isolate)

text: Sus scrofa domesticus

text: Yes

text: No

text: Escherichia coli

text: Escherichia coli

value: mg/L

value: Sensititre

value: azithromycin

value: trimethoprim

value: cefoxitin

value: chloramphenicol


text: DTU-GE

text: public

text: DNK

text: sam_103239_20160518_DTU2016_580_PRJ1055_ESchericha_coli_15104250

characteristic: Submitter Id

text: DTU-GE

characteristic: broker name

characteristic: collection date

text: Escherichia

text: Denmark

text: other (non-clinical isolate)

text: Bos primigenius

text: Yes

text: No

text: Escherichia coli

characteristic: organism

text: Escherichia coli

value: resistant

value: gentamicin

value: colistin

value: tigecycline

value: sulfamethoxazole

value: EU


characteristic: ENA-FIRST-PUBLIC

text: DTU-GE

text: public

text: sam_103239_20160518_DTU2016_581_PRJ1055_ESchericha_coli_15105278

text: DTU-GE

text: Denmark

characteristic: geographic location (country and/or sea)

text: Sus scrofa domesticus

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: No

text: Escherichia coli

text: Escherichia coli


characteristic: ENA-LAST-UPDATE

text: DTU-GE

characteristic: INSDC last update

text: public

text: DNK

text: sam_103239_20160518_DTU2016_582_PRJ1055_ESchericha_coli_15116853

text: DTU-GE

text: Escherichia

characteristic: genus

text: Denmark

text: other (non-clinical isolate)

characteristic: host

text: Bos primigenius

text: Yes

text: No

text: Escherichia coli

text: Escherichia coli

value: Escherichia coli

value: cefotaxime

value: tetracycline

value: susceptible

value: meropenem

value: imipenem

value: ampicillin


characteristic: ENA-CHECKLIST

characteristic: External Id

text: DTU-GE

text: public

text: sam_103239_20160518_DTU2016_583_PRJ1055_ESchericha_coli_15116857

text: DTU-GE

text: Denmark

text: Bos primigenius

text: Yes

characteristic: isolate

text: No

characteristic: note

text: Escherichia coli

text: Escherichia coli


text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: sam_103239_20160518_DTU2016_584_PRJ1055_ESchericha_coli_15116861

text: DTU-GE

text: Denmark

text: Bos primigenius

text: Yes

text: No

text: Escherichia coli

text: Escherichia coli


text: DTU-GE

text: public

text: DNK

text: sam_103239_20160518_DTU2016_585_PRJ1055_ESchericha_coli_15080719

characteristic: Submitter Id

text: DTU-GE

characteristic: broker name

characteristic: collection date

text: Escherichia

text: Denmark

text: other (non-clinical isolate)

text: Bos primigenius

text: Yes

text: No

text: Escherichia coli

characteristic: organism

text: Escherichia coli

value: ciprofloxacin

value: broth dilution

value: mg/L

value: Sensititre

value: EUCAST

value: nalidixic acid


characteristic: ENA-FIRST-PUBLIC

text: DTU-GE

text: public

text: DNK

text: sam_103239_20160518_DTU2016_586_PRJ1055_ESchericha_coli_15085380

text: DTU-GE

text: Escherichia

text: Denmark

characteristic: geographic location (country and/or sea)

text: other (non-clinical isolate)

text: Sus scrofa domesticus

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: No

text: Escherichia coli

text: Escherichia coli

value: cefoxitin

value: resistant

value: gentamicin

value: chloramphenicol

value: colistin

value: ceftazidime

value: azithromycin

value: trimethoprim


characteristic: ENA-LAST-UPDATE

text: DTU-GE

characteristic: INSDC last update

text: public

text: sam_103239_20160518_DTU2016_587_PRJ1055_ESchericha_coli_15085382

text: DTU-GE

text: Denmark

text: Sus scrofa domesticus

text: Yes

text: No

text: Escherichia coli

text: Escherichia coli