characteristic: ENA-CHECKLIST

text: WUR

text: public

characteristic: Submitter Id

characteristic: collection date

text: Artificial Community

text: Artificial Community

text: Artificial Community

characteristic: environment (material)

text: Netherlands

characteristic: geographic location (country and/or sea)

text: metagenome

text: metagenome

text: metagenome

text: Illumina HiSeq 2000

characteristic: sequencing method

text: Mc 4 replicate 1 library 05

characteristic: title


status: PUBLIC

tag: attribute

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: WUR

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Artificial Community

characteristic: environment (biome)

text: Artificial Community

characteristic: environment (feature)

text: Artificial Community

text: Netherlands

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: miscellaneous natural or artificial environment

characteristic: miscellaneous environmental package

text: metagenome

characteristic: organism

characteristic: project name

text: metagenome

text: Illumina HiSeq 2000

text: Mc 4 replicate 2 library 05


characteristic: ENA-CHECKLIST

text: WUR

text: public

characteristic: Submitter Id

characteristic: collection date

text: Artificial Community

text: Artificial Community

text: Artificial Community

characteristic: environment (material)

text: Netherlands

characteristic: geographic location (country and/or sea)

text: metagenome

text: metagenome

text: metagenome

text: Illumina HiSeq 2000

characteristic: sequencing method

text: Mc 2 replicate 1 library 06

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characteristic: ENA-FIRST-PUBLIC

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characteristic: External Id

text: WUR

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Artificial Community

text: Artificial Community

text: Artificial Community

text: Netherlands

text: metagenome

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text: metagenome

text: Illumina HiSeq 2000

text: Mc 2 replicate 2 library 06


text: WUR

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characteristic: SRA accession

text: Artificial Community

characteristic: environment (biome)

text: Artificial Community

characteristic: environment (feature)

text: Artificial Community

text: Netherlands

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

characteristic: miscellaneous environmental package

text: metagenome

text: metagenome

text: Illumina HiSeq 2000

text: Mc 4 replicate 1 library 06


characteristic: ENA-CHECKLIST

text: WUR

text: public

characteristic: Submitter Id

characteristic: collection date

text: Artificial Community

text: Artificial Community

text: Artificial Community

characteristic: environment (material)

text: Netherlands

characteristic: geographic location (country and/or sea)

text: metagenome

text: metagenome

characteristic: organism

characteristic: project name

text: metagenome

text: Illumina HiSeq 2000

text: Mc 4 replicate 2 library 06


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: WUR

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Artificial Community

text: Artificial Community

text: Artificial Community

text: Netherlands

text: metagenome

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text: Illumina HiSeq 2000

characteristic: sequencing method

text: Mc 2 replicate 1 library 07

characteristic: title


text: WUR

characteristic: INSDC last update

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characteristic: SRA accession

text: Artificial Community

characteristic: environment (biome)

text: Artificial Community

characteristic: environment (feature)

text: Artificial Community

text: Netherlands

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: metagenome

text: metagenome

text: Illumina HiSeq 2000

text: Mc 2 replicate 2 library 07


characteristic: ENA-CHECKLIST

text: WUR

text: public

characteristic: Submitter Id

characteristic: collection date

text: Artificial Community

text: Artificial Community

text: Artificial Community

characteristic: environment (material)

text: Netherlands

characteristic: geographic location (country and/or sea)

text: metagenome

characteristic: investigation type

characteristic: miscellaneous environmental package

text: metagenome

text: metagenome

text: Illumina HiSeq 2000

text: Mc 4 replicate 1 library 07


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: WUR

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Artificial Community

text: Artificial Community

text: Artificial Community

text: Netherlands

text: metagenome

text: metagenome

characteristic: organism

characteristic: project name

text: metagenome

text: Illumina HiSeq 2000

text: Mc 4 replicate 2 library 07


metagenome_green snow

text: UNIVERSITY OF LEEDS

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: metagenome_green snow

tag: Namespace:UNIVERSITY OF LEEDS

text: snow

characteristic: environment (biome)

text: snow

characteristic: environment (feature)

text: snow

text: Svalbard

text: metagenome

text: snow metagenome

text: Green and red snow on Feiringbreen

text: snow metagenome

text: Ion Torrent PGM

characteristic: sequencing method

text: snow metagenome

characteristic: title


metagenome_red snow

characteristic: ENA-CHECKLIST

text: UNIVERSITY OF LEEDS

text: public

text: metagenome_red snow

characteristic: Submitter Id

characteristic: collection date

text: snow

text: snow

text: snow

characteristic: environment (material)

text: Svalbard

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: snow metagenome

text: Green and red snow on Feiringbreen

text: snow metagenome

text: Ion Torrent PGM

text: snow metagenome


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:ZOOLOGY DEPARTMENT, UNIVERSITY OF OXFORD

text: Herpes simplex virus (type 1 / strain 17)

type: has member


text: ZOOLOGY DEPARTMENT, UNIVERSITY OF OXFORD

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: isolate

characteristic: organism


characteristic: ENA-CHECKLIST

text: public

tag: Namespace:MAX PLANCK INSTITUTE OF IMMUNOBIOLOGY AND EPIGENETICS

text: house mouse

characteristic: common name

text: Epididymal fat pad isolated (RRBS)

characteristic: description

text: Mus musculus

text: Mus musculus

text: male

characteristic: sex

text: ctrl

characteristic: state

text: FVB/NJ

characteristic: strain

text: Trim28+/D9 (MommeD9)

characteristic: sub strain

text: eWAT

characteristic: tissue type

text: isolated epididymal fat pad

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MAX PLANCK INSTITUTE OF IMMUNOBIOLOGY AND EPIGENETICS

text: public

characteristic: Submitter Id

text: house mouse

text: Epididymal fat pad isolated (RRBS)

text: Mus musculus

text: Mus musculus

text: male

text: ctrl

text: FVB/NJ

text: Trim28+/D9 (MommeD9)

text: eWAT

text: isolated epididymal fat pad


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: house mouse

text: Epididymal fat pad isolated (RRBS)

text: Mus musculus

text: Mus musculus

text: male

text: lean

text: FVB/NJ

text: Trim28+/D9 (MommeD9)

text: eWAT

text: isolated epididymal fat pad


characteristic: ENA-CHECKLIST

text: public

characteristic: SRA accession

text: house mouse

text: Epididymal fat pad isolated (RRBS)

text: Mus musculus

characteristic: organism

text: Mus musculus

text: male

text: obese

text: FVB/NJ

text: Trim28+/D9 (MommeD9)

text: eWAT

text: isolated epididymal fat pad


text: public

text: house mouse

characteristic: common name

text: Epididymal fat pad isolated and RNA was extracted using TriReagent

characteristic: description

text: Mus musculus

text: Mus musculus

text: male

characteristic: sex

text: obese

text: FVB/NJ

text: Trim28+/D9 (MommeD9)

text: eWAT

text: isolated epididymal fat pad


text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: male

text: lean

characteristic: state

text: FVB/NJ

characteristic: strain

text: Trim28+/D9 (MommeD9)

characteristic: sub strain

text: eWAT

text: isolated epididymal fat pad


characteristic: ENA-FIRST-PUBLIC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: male

text: ctrl

text: FVB/NJ

text: Trim28+/D9 (MommeD9)

text: eWAT

characteristic: tissue type

text: isolated epididymal fat pad

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: Submitter Id

text: house mouse

text: Epididymal fat pad isolated and treated with collagenase to obtain purified mature adipocytes from which DNA was extracted using DNeasy Blood and Tissue Kit (Qiagen)

text: Mus musculus

text: Mus musculus

text: male

text: ctrl

text: FVB/NJ

text: Trim28+/D9 (MommeD9)

text: eWAT

text: isolated epididymal fat pad


BAL 242 FFS

text: LSHTM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: BAL 242 FFS

characteristic: collection date

text: Colistin sensitive parent

text: Viet Nam

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: Human

characteristic: host scientific name

text: BAL 242

characteristic: isolate

text: clinical sample

characteristic: isolation source

text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: BAL 242_day0


BAL 255 FFS

characteristic: ENA-CHECKLIST

text: LSHTM

text: public

characteristic: INSDC status

characteristic: SRA accession

text: BAL 255 FFS

text: Colistin sensitive parent

characteristic: description

text: Viet Nam

text: diseased

text: Human

text: BAL 255

text: clinical sample

text: Acinetobacter baumannii

characteristic: organism

text: Acinetobacter baumannii

text: BAL 255_day0


BAL 266 FFS

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: LSHTM

text: public

text: BAL 266 FFS

text: Colistin sensitive parent

text: Viet Nam

text: diseased

text: Human

text: BAL 266

text: clinical sample

text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: BAL 266_day0

characteristic: title


ATCC19606 FFS

characteristic: External Id

text: LSHTM

characteristic: INSDC center name

text: public

text: ATCC19606 FFS

characteristic: Submitter Id

text: Netherlands

text: diseased

text: Human

text: clinical sample

text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: ATCC19606 assembly


BAL 062 FFS

text: LSHTM

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: BAL 062 FFS

characteristic: collection date

text: Colistin sensitive parent

text: Viet Nam

text: diseased

text: Human

text: BAL 062

text: clinical sample

text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: BAL 062_day0


text: Department of Biosecurity PCL3

text: public

tag: Namespace:Department of Biosecurity PCL3

text: France

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: Homosapien

characteristic: host scientific name

text: skinf of human

text: genomic DNA

text: Staphylococcus capitis

text: Staphylococcus capitis

characteristic: strain


characteristic: ENA-CHECKLIST

text: Department of Biosecurity PCL3

text: public

characteristic: INSDC status

text: France

text: diseased

text: Homosapien

text: skin of human

characteristic: isolate

text: genomic DNA

characteristic: isolation source

text: Staphylococcus capitis

text: Staphylococcus capitis


Apical periodontitis1

characteristic: ENA-FIRST-PUBLIC

text: KAROLINSKA INSITUTET

text: public

characteristic: SRA accession

text: Apical periodontitis1

tag: Namespace:KAROLINSKA INSITUTET

text: Apical periodontitis

characteristic: description

text: microbiome

characteristic: environment (biome)

text: oral

characteristic: environment (feature)

text: human

characteristic: environment (material)

text: Sweden

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-oral

characteristic: humam oral environmental package

text: metagenome

characteristic: investigation type

text: human oral metagenome

characteristic: organism

text: Apical periodontitis

characteristic: project name

text: human oral metagenome

text: illumina

characteristic: sequencing method

text: Apical periodontitis


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: BGI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

characteristic: collection date

text: Native creole pigs

text: pig gut

text: pig-associated habitat

text: faeces

text: France

characteristic: geographic location (country and/or sea)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

text: pig gut metagenome

text: A Catalogue of the pig Gut Metagenome

text: pig gut metagenome

text: Illumina

text: Stool sample from pig strain : Cre

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: BGI

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Yucatan (minipig)

characteristic: description

text: pig gut

characteristic: environment (biome)

text: pig-associated habitat

characteristic: environment (feature)

text: faeces

characteristic: environment (material)

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

text: metagenome

text: pig gut metagenome

text: A Catalogue of the pig Gut Metagenome

text: pig gut metagenome

text: Illumina

text: Stool sample from pig strain : Yu


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: BGI

characteristic: INSDC center name

text: public

text: Pitman-Moore (minipig)

text: pig gut

text: pig-associated habitat

text: faeces

text: France

text: host-associated

text: metagenome

characteristic: investigation type

text: pig gut metagenome

characteristic: organism

text: A Catalogue of the pig Gut Metagenome

characteristic: project name

text: pig gut metagenome

text: Illumina

characteristic: sequencing method

text: Stool sample from pig strain : P-M


characteristic: ENA-FIRST-PUBLIC

text: BGI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

characteristic: collection date

text: Vietnamese (minipig)

text: pig gut

text: pig-associated habitat

text: faeces

text: France

characteristic: geographic location (country and/or sea)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

text: pig gut metagenome

text: A Catalogue of the pig Gut Metagenome

text: pig gut metagenome

text: Illumina

text: Stool sample from pig strain : Vi

characteristic: title


text: BGI

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Pietrain

characteristic: description

text: pig gut

characteristic: environment (biome)

text: pig-associated habitat

characteristic: environment (feature)

text: faeces

characteristic: environment (material)

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

text: metagenome

text: pig gut metagenome

text: A Catalogue of the pig Gut Metagenome

text: pig gut metagenome

text: Illumina

text: Stool sample from pig strain : PT


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: BGI

characteristic: INSDC center name

text: public

text: Large White

text: pig gut

text: pig-associated habitat

text: faeces

text: France

text: host-associated

text: metagenome

characteristic: investigation type

text: pig gut metagenome

characteristic: organism

text: A Catalogue of the pig Gut Metagenome

characteristic: project name

text: pig gut metagenome

text: Illumina

characteristic: sequencing method

text: Stool sample from pig strain : LW


characteristic: ENA-FIRST-PUBLIC

text: BGI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

characteristic: collection date

text: Large White x Landrace

text: pig gut

text: pig-associated habitat

text: faeces

text: France

characteristic: geographic location (country and/or sea)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

text: pig gut metagenome

text: A Catalogue of the pig Gut Metagenome

text: pig gut metagenome

text: Illumina

text: Stool sample from pig strain : Hyb1

characteristic: title


text: BGI

text: public

characteristic: INSDC status

characteristic: SRA accession

text: (Large White x Landrace)x Pietran

characteristic: description

text: pig gut

characteristic: environment (biome)

text: pig-associated habitat

characteristic: environment (feature)

text: faeces

characteristic: environment (material)

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

text: metagenome

text: pig gut metagenome

text: A Catalogue of the pig Gut Metagenome

text: pig gut metagenome

text: Illumina

text: Stool sample from pig strain : Hyb2


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: BGI

characteristic: INSDC center name

text: public

text: MeLiM

text: pig gut

text: pig-associated habitat

text: faeces

text: France

text: host-associated

text: metagenome

characteristic: investigation type

text: pig gut metagenome

characteristic: organism

text: A Catalogue of the pig Gut Metagenome

characteristic: project name

text: pig gut metagenome

text: Illumina

characteristic: sequencing method

text: Stool sample from pig strain : MeL


characteristic: ENA-FIRST-PUBLIC

text: BGI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

characteristic: collection date

text: Meishan

text: pig gut

text: pig-associated habitat

text: faeces

text: France

characteristic: geographic location (country and/or sea)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

text: pig gut metagenome

text: A Catalogue of the pig Gut Metagenome

text: pig gut metagenome

text: Illumina

text: Stool sample from pig strain : Mei

characteristic: title


text: BGI

text: public

characteristic: INSDC status

characteristic: SRA accession

text: (Landrace x Yorkshire) x Duroc

characteristic: description

text: pig gut

characteristic: environment (biome)

text: pig-associated habitat

characteristic: environment (feature)

text: faeces

characteristic: environment (material)

text: Denmark

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

text: metagenome

text: pig gut metagenome

text: A Catalogue of the pig Gut Metagenome

text: pig gut metagenome

text: Illumina

text: Stool sample from pig strain : HybDN


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: BGI

characteristic: INSDC center name

text: public

text: Ba Ring

text: pig gut

text: pig-associated habitat

text: faeces

text: China

text: host-associated

text: metagenome

characteristic: investigation type

text: pig gut metagenome

characteristic: organism

text: A Catalogue of the pig Gut Metagenome

characteristic: project name

text: pig gut metagenome

text: Illumina

characteristic: sequencing method

text: Stool sample from pig strain : BRP


characteristic: ENA-FIRST-PUBLIC

text: BGI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

characteristic: collection date

text: Bama (minipig)

text: pig gut

text: pig-associated habitat

text: faeces

text: China

characteristic: geographic location (country and/or sea)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

text: pig gut metagenome

text: A Catalogue of the pig Gut Metagenome

text: pig gut metagenome

text: Illumina

text: Stool sample from pig strain : BP

characteristic: title


text: BGI

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Large White

characteristic: description

text: pig gut

characteristic: environment (biome)

text: pig-associated habitat

characteristic: environment (feature)

text: faeces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

text: metagenome

text: pig gut metagenome

text: A Catalogue of the pig Gut Metagenome

text: pig gut metagenome

text: Illumina

text: Stool sample from pig strain : LWP


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: BGI

characteristic: INSDC center name

text: public

text: Binary mixed

text: pig gut

text: pig-associated habitat

text: faeces

text: China

text: host-associated

text: metagenome

characteristic: investigation type

text: pig gut metagenome

characteristic: organism

text: A Catalogue of the pig Gut Metagenome

characteristic: project name

text: pig gut metagenome

text: Illumina

characteristic: sequencing method

text: Stool sample from pig strain : BMr


characteristic: ENA-FIRST-PUBLIC

text: BGI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

characteristic: collection date

text: Binary mixed

text: pig gut

text: pig-associated habitat

text: faeces

text: China

characteristic: geographic location (country and/or sea)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

text: pig gut metagenome

text: A Catalogue of the pig Gut Metagenome

text: pig gut metagenome

text: Illumina

text: Stool sample from pig strain : BMc

characteristic: title


text: BGI

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Tertiary mixed

characteristic: description

text: pig gut

characteristic: environment (biome)

text: pig-associated habitat

characteristic: environment (feature)

text: faeces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

text: metagenome

text: pig gut metagenome

text: A Catalogue of the pig Gut Metagenome

text: pig gut metagenome

text: Illumina

text: Stool sample from pig strain : TMr


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: BGI

characteristic: INSDC center name

text: public

text: Tertiary mixed

text: pig gut

text: pig-associated habitat

text: faeces

text: China

text: host-associated

text: metagenome

characteristic: investigation type

text: pig gut metagenome

characteristic: organism

text: A Catalogue of the pig Gut Metagenome

characteristic: project name

text: pig gut metagenome

text: Illumina

characteristic: sequencing method

text: Stool sample from pig strain : TMc


characteristic: ENA-FIRST-PUBLIC

text: BGI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

characteristic: collection date

text: Tibetan pig

text: pig gut

text: pig-associated habitat

text: faeces

text: China

characteristic: geographic location (country and/or sea)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

text: pig gut metagenome

text: A Catalogue of the pig Gut Metagenome

text: pig gut metagenome

text: Illumina

text: Stool sample from pig strain : TP

characteristic: title


text: MHH

text: public

characteristic: INSDC status

characteristic: SRA accession

text: TCAG

characteristic: adapters

text: control group (cloacal administration of sterile cell culture-grade PBS at two weeks, 3 weeks and 3.5 weeks after hatching)

characteristic: description

text: animal facility

characteristic: environment (biome)

text: animal facility

characteristic: environment (feature)

text: air

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

unit: week

characteristic: host age

text: caecum

characteristic: host body site

text: white Leghorn layer chicken

characteristic: host common name

text: white Leghorn layer chicken

characteristic: host infra specific name

text: chicken 1

characteristic: host subject id

characteristic: host taxid

text: host-associated

text: mimarks-survey

text: ACGAGTGCGT

characteristic: multiplex identifiers

text: chicken gut metagenome

text: 8F (5'-AGAGTTTGATCCTGGCTCAG-3'), 541R (5'-WTTACCGCGGCTGCTGG-3'); sequencing primer: 541R

characteristic: pcr primers

text: Novel immunomodulatory flagellin-like protein FlaC in Campylobacter jejuni and other Campylobacterales

text: chicken gut metagenome

text: pyrosequencing

text: 16S rDNA

characteristic: target gene

text: V1 - V3

characteristic: target subfragment

text: caecal mucosal microbiota of chicken 1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MHH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: TCAG

characteristic: adapters

characteristic: collection date

text: animal facility

text: animal facility

text: air

text: Germany

characteristic: geographic location (country and/or sea)

text: caecum

text: white Leghorn layer chicken

text: white Leghorn layer chicken

text: chicken 2

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: ACGAGTGCGT

text: chicken gut metagenome

characteristic: organism

characteristic: project name

text: chicken gut metagenome

text: pyrosequencing

characteristic: sequencing method

text: 16S rDNA

text: V1 - V3

text: caecal mucosal microbiota of chicken 2

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: MHH

text: public

text: TCAG

characteristic: description

text: animal facility

characteristic: environment (biome)

text: animal facility

characteristic: environment (feature)

text: air

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: caecum

characteristic: host body site

text: white Leghorn layer chicken

characteristic: host common name

text: white Leghorn layer chicken

characteristic: host infra specific name

text: chicken 3

characteristic: host subject id

characteristic: host taxid

text: host-associated

text: mimarks-survey

text: ACGCTCGACA

characteristic: multiplex identifiers

text: chicken gut metagenome

characteristic: pcr primers

text: chicken gut metagenome

text: pyrosequencing

text: 16S rDNA

characteristic: target gene

text: V1 - V3

characteristic: target subfragment

text: caecal mucosal microbiota of chicken 3


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MHH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: TCAG

characteristic: adapters

characteristic: collection date

text: animal facility

text: animal facility

text: air

text: Germany

characteristic: geographic location (country and/or sea)

text: caecum

text: white Leghorn layer chicken

text: white Leghorn layer chicken

text: chicken 4

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: AGACGCACTC

text: chicken gut metagenome

characteristic: organism

characteristic: project name

text: chicken gut metagenome

text: pyrosequencing

characteristic: sequencing method

text: 16S rDNA

text: V1 - V3

text: caecal mucosal microbiota of chicken 4

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: MHH

text: public

text: TCAG

characteristic: description

text: animal facility

characteristic: environment (biome)

text: animal facility

characteristic: environment (feature)

text: air

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: caecum

characteristic: host body site

text: white Leghorn layer chicken

characteristic: host common name

text: white Leghorn layer chicken

characteristic: host infra specific name

text: chicken 5

characteristic: host subject id

characteristic: host taxid

text: host-associated

text: mimarks-survey

text: ATCAGACACG

characteristic: multiplex identifiers

text: chicken gut metagenome

characteristic: pcr primers

text: chicken gut metagenome

text: pyrosequencing

text: 16S rDNA

characteristic: target gene

text: V1 - V3

characteristic: target subfragment

text: caecal mucosal microbiota of chicken 5


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MHH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: TCAG

characteristic: adapters

characteristic: collection date

text: animal facility

text: animal facility

text: air

text: Germany

characteristic: geographic location (country and/or sea)

text: caecum

text: white Leghorn layer chicken

text: white Leghorn layer chicken

text: chicken 6

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: ATATCGCGAG

text: chicken gut metagenome

characteristic: organism

characteristic: project name

text: chicken gut metagenome

text: pyrosequencing

characteristic: sequencing method

text: 16S rDNA

text: V1 - V3

text: caecal mucosal microbiota of chicken 6

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: MHH

text: public

text: TCAG

characteristic: description

text: animal facility

characteristic: environment (biome)

text: animal facility

characteristic: environment (feature)

text: air

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: caecum

characteristic: host body site

text: white Leghorn layer chicken

characteristic: host common name

text: white Leghorn layer chicken

characteristic: host infra specific name

text: chicken 7

characteristic: host subject id

characteristic: host taxid

text: host-associated

text: mimarks-survey

text: CGTGTCTCTA

characteristic: multiplex identifiers

text: chicken gut metagenome

characteristic: pcr primers

text: chicken gut metagenome

text: pyrosequencing

text: 16S rDNA

characteristic: target gene

text: V1 - V3

characteristic: target subfragment

text: caecal mucosal microbiota of chicken 7


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MHH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: TCAG

characteristic: adapters

characteristic: collection date

text: animal facility

text: animal facility

text: air

text: Germany

characteristic: geographic location (country and/or sea)

text: caecum

text: white Leghorn layer chicken

text: white Leghorn layer chicken

text: chicken 8

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: CTCGCGTGTC

text: chicken gut metagenome

characteristic: organism

characteristic: project name

text: chicken gut metagenome

text: pyrosequencing

characteristic: sequencing method

text: 16S rDNA

text: V1 - V3

text: caecal mucosal microbiota of chicken 8

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: MHH

text: public

text: TCAG

text: treatment group (cloacal administration of 25 microgram purified recombinant FlaC in 200 microlitre sterile cell culture-grade PBS at two weeks, 3 weeks and 3.5 weeks after hatching)

characteristic: description

text: animal facility

characteristic: environment (biome)

text: animal facility

characteristic: environment (feature)

text: air

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: caecum

characteristic: host body site

text: white Leghorn layer chicken

characteristic: host common name

text: white Leghorn layer chicken

characteristic: host infra specific name

text: chicken 9

characteristic: host subject id

characteristic: host taxid

text: host-associated

text: mimarks-survey

text: AGCACTGTAG

characteristic: multiplex identifiers

text: chicken gut metagenome

characteristic: pcr primers

text: chicken gut metagenome

text: pyrosequencing

text: 16S rDNA

characteristic: target gene

text: V1 - V3

characteristic: target subfragment

text: caecal mucosal microbiota of chicken 9


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MHH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: TCAG

characteristic: adapters

characteristic: collection date

text: animal facility

text: animal facility

text: air

text: Germany

characteristic: geographic location (country and/or sea)

text: caecum

text: white Leghorn layer chicken

text: white Leghorn layer chicken

text: chicken 10

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: ACGCTCGACA

text: chicken gut metagenome

characteristic: organism

characteristic: project name

text: chicken gut metagenome

text: pyrosequencing

characteristic: sequencing method

text: 16S rDNA

text: V1 - V3

text: caecal mucosal microbiota of chicken 10

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: MHH

text: public

text: TCAG

characteristic: description

text: animal facility

characteristic: environment (biome)

text: animal facility

characteristic: environment (feature)

text: air

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: caecum

characteristic: host body site

text: white Leghorn layer chicken

characteristic: host common name

text: white Leghorn layer chicken

characteristic: host infra specific name

text: chicken 11

characteristic: host subject id

characteristic: host taxid

text: host-associated

text: mimarks-survey

text: AGACGCACTC

characteristic: multiplex identifiers

text: chicken gut metagenome

characteristic: pcr primers

text: chicken gut metagenome

text: pyrosequencing

text: 16S rDNA

characteristic: target gene

text: V1 - V3

characteristic: target subfragment

text: caecal mucosal microbiota of chicken 11


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MHH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: TCAG

characteristic: adapters

characteristic: collection date

text: animal facility

text: animal facility

text: air

text: Germany

characteristic: geographic location (country and/or sea)

text: caecum

text: white Leghorn layer chicken

text: white Leghorn layer chicken

text: chicken 12

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: AGCACTGTAG

text: chicken gut metagenome

characteristic: organism

characteristic: project name

text: chicken gut metagenome

text: pyrosequencing

characteristic: sequencing method

text: 16S rDNA

text: V1 - V3

text: caecal mucosal microbiota of chicken 12

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: MHH

text: public

text: TCAG

characteristic: description

text: animal facility

characteristic: environment (biome)

text: animal facility

characteristic: environment (feature)

text: air

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: caecum

characteristic: host body site

text: white Leghorn layer chicken

characteristic: host common name

text: white Leghorn layer chicken

characteristic: host infra specific name

text: chicken 13

characteristic: host subject id

characteristic: host taxid

text: host-associated

text: mimarks-survey

text: ATCAGACACG

characteristic: multiplex identifiers

text: chicken gut metagenome

characteristic: pcr primers

text: chicken gut metagenome

text: pyrosequencing

text: 16S rDNA

characteristic: target gene

text: V1 - V3

characteristic: target subfragment

text: caecal mucosal microbiota of chicken 13


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MHH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: TCAG

characteristic: adapters

characteristic: collection date

text: animal facility

text: animal facility

text: air

text: Germany

characteristic: geographic location (country and/or sea)

text: caecum

text: white Leghorn layer chicken

text: white Leghorn layer chicken

text: chicken 14

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: ATATCGCGAG

text: chicken gut metagenome

characteristic: organism

characteristic: project name

text: chicken gut metagenome

text: pyrosequencing

characteristic: sequencing method

text: 16S rDNA

text: V1 - V3

text: caecal mucosal microbiota of chicken 14

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: MHH

text: public

text: TCAG

characteristic: description

text: animal facility

characteristic: environment (biome)

text: animal facility

characteristic: environment (feature)

text: air

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: caecum

characteristic: host body site

text: white Leghorn layer chicken

characteristic: host common name

text: white Leghorn layer chicken

characteristic: host infra specific name

text: chicken 15

characteristic: host subject id

characteristic: host taxid

text: host-associated

text: mimarks-survey

text: CGTGTCTCTA

characteristic: multiplex identifiers

text: chicken gut metagenome

characteristic: pcr primers

text: chicken gut metagenome

text: pyrosequencing

text: 16S rDNA

characteristic: target gene

text: V1 - V3

characteristic: target subfragment

text: caecal mucosal microbiota of chicken 15


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MHH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: TCAG

characteristic: adapters

characteristic: collection date

text: animal facility

text: animal facility

text: air

text: Germany

characteristic: geographic location (country and/or sea)

text: caecum

text: white Leghorn layer chicken

text: white Leghorn layer chicken

text: chicken 16

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: CTCGCGTGTC

text: chicken gut metagenome

characteristic: organism

characteristic: project name

text: chicken gut metagenome

text: pyrosequencing

characteristic: sequencing method

text: 16S rDNA

text: V1 - V3

text: caecal mucosal microbiota of chicken 16

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Swiss Federal Research Institute WSL

text: public

tag: Namespace:Swiss Federal Research Institute WSL

unit: m

characteristic: depth

text: permafrost 160 cm

characteristic: description

text: alpine cryosphere

characteristic: environment (biome)

text: permafrost habitat

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Switzerland

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

unit: mm

characteristic: mean annual and seasonal precipitation

unit: ºC

characteristic: mean annual and seasonal temperature

text: MoBio

characteristic: nucleic acid extraction

text: soil metagenome

text: CCTAYGGGDBGCWSCAG/GGACTACNVGGGTHTCTAAT

characteristic: pcr primers

characteristic: ph

text: Muot da Barba Peider Permafrost

text: soil metagenome

text: Illumina MiSeq v3 PE300

text: NW

characteristic: slope aspect

text: soil

characteristic: soil environmental package

text: SSU rRNA

characteristic: target gene

characteristic: target subfragment

unit: % sand/silt/clay

characteristic: texture


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Swiss Federal Research Institute WSL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: depth

text: active layer 160 cm

characteristic: description

text: alpine cryosphere

text: permafrost habitat

text: soil

text: Switzerland

characteristic: geographic location (country and/or sea)

text: metagenome

characteristic: investigation type

text: MoBio

text: soil metagenome

characteristic: organism

text: CCTAYGGGDBGCWSCAG/GGACTACNVGGGTHTCTAAT

text: Muot da Barba Peider Permafrost

characteristic: project name

text: soil metagenome

text: Illumina MiSeq v3 PE300

characteristic: sequencing method

text: SE

text: soil

text: SSU rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Swiss Federal Research Institute WSL

text: public

text: active layer 10 cm

text: alpine cryosphere

characteristic: environment (biome)

text: permafrost habitat

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Switzerland

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: mean annual and seasonal precipitation

characteristic: mean annual and seasonal temperature

text: MoBio

characteristic: nucleic acid extraction

text: soil metagenome

text: CCTAYGGGDBGCWSCAG/GGACTACNVGGGTHTCTAAT

characteristic: pcr primers

characteristic: ph

text: Muot da Barba Peider Permafrost

text: soil metagenome

text: Illumina MiSeq v3 PE300

text: NW

characteristic: slope aspect

text: soil

characteristic: soil environmental package

text: SSU rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: texture


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Swiss Federal Research Institute WSL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: depth

text: active layer 10 cm

characteristic: description

text: alpine cryosphere

text: permafrost habitat

text: soil

text: Switzerland

characteristic: geographic location (country and/or sea)

text: metagenome

characteristic: investigation type

text: MoBio

text: soil metagenome

characteristic: organism

text: CCTAYGGGDBGCWSCAG/GGACTACNVGGGTHTCTAAT

text: Muot da Barba Peider Permafrost

characteristic: project name

text: soil metagenome

text: Illumina MiSeq v3 PE300

characteristic: sequencing method

text: SE

text: soil

text: SSU rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Swiss Federal Research Institute WSL

text: public

text: permafrost 160 cm

text: alpine cryosphere

characteristic: environment (biome)

text: permafrost habitat

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Switzerland

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: mean annual and seasonal precipitation

characteristic: mean annual and seasonal temperature

text: MoBio

characteristic: nucleic acid extraction

text: soil metagenome

text: CAHCGATGAAGAACGYRG/TCCTSCGCTTATTGATATGC

characteristic: pcr primers

characteristic: ph

text: Muot da Barba Peider Permafrost

text: soil metagenome

text: Illumina MiSeq v3 PE300

text: NW

characteristic: slope aspect

text: soil

characteristic: soil environmental package

text: ITS rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: texture


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Swiss Federal Research Institute WSL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: depth

text: active layer 160 cm

characteristic: description

text: alpine cryosphere

text: permafrost habitat

text: soil

text: Switzerland

characteristic: geographic location (country and/or sea)

text: metagenome

characteristic: investigation type

text: MoBio

text: soil metagenome

characteristic: organism

text: CAHCGATGAAGAACGYRG/TCCTSCGCTTATTGATATGC

text: Muot da Barba Peider Permafrost

characteristic: project name

text: soil metagenome

text: Illumina MiSeq v3 PE300

characteristic: sequencing method

text: SE

text: soil

text: ITS rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Swiss Federal Research Institute WSL

text: public

text: active layer 10 cm

text: alpine cryosphere

characteristic: environment (biome)

text: permafrost habitat

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Switzerland

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: mean annual and seasonal precipitation

characteristic: mean annual and seasonal temperature

text: MoBio

characteristic: nucleic acid extraction

text: soil metagenome

text: CAHCGATGAAGAACGYRG/TCCTSCGCTTATTGATATGC

characteristic: pcr primers

characteristic: ph

text: Muot da Barba Peider Permafrost

text: soil metagenome

text: Illumina MiSeq v3 PE300

text: NW

characteristic: slope aspect

text: soil

characteristic: soil environmental package

text: ITS rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: texture


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Swiss Federal Research Institute WSL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: depth

text: active layer 10 cm

characteristic: description

text: alpine cryosphere

text: permafrost habitat

text: soil

text: Switzerland

characteristic: geographic location (country and/or sea)

text: metagenome

characteristic: investigation type

text: MoBio

text: soil metagenome

characteristic: organism

text: CAHCGATGAAGAACGYRG/TCCTSCGCTTATTGATATGC

text: Muot da Barba Peider Permafrost

characteristic: project name

text: soil metagenome

text: Illumina MiSeq v3 PE300

characteristic: sequencing method

text: SE

text: soil

text: ITS rRNA

characteristic: title


ASC 1(t3)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: IBERS

text: public

text: ASC 1(t3)

text: Rumen microbiome

characteristic: environment (biome)

text: In-vitro fermention (RUSITEC)

characteristic: environment (feature)

text: Liquid fraction

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: miscellaneous environmental package

text: bovine gut metagenome

text: WISE

text: bovine gut metagenome

text: PGM Ion-Torrent


CON 1(t5)

characteristic: External Id

text: IBERS

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: CON 1(t5)

characteristic: Submitter Id

characteristic: collection date

text: Rumen microbiome

text: In-vitro fermention (RUSITEC)

text: Liquid fraction

text: United Kingdom

text: metagenome

text: bovine gut metagenome

text: WISE

text: bovine gut metagenome

text: PGM Ion-Torrent


LAM 1(t6)

characteristic: ENA-CHECKLIST

text: IBERS

text: public

text: LAM 1(t6)

text: Rumen microbiome

text: In-vitro fermention (RUSITEC)

text: Liquid fraction

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: metagenome

characteristic: investigation type

text: bovine gut metagenome

characteristic: organism

text: WISE

characteristic: project name

text: bovine gut metagenome

text: PGM Ion-Torrent

characteristic: sequencing method

characteristic: title


CON 2(t7)

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: IBERS

text: public

text: CON 2(t7)

text: Rumen microbiome

characteristic: environment (biome)

text: In-vitro fermention (RUSITEC)

characteristic: environment (feature)

text: Liquid fraction

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: bovine gut metagenome

text: WISE

text: bovine gut metagenome

text: PGM Ion-Torrent


LAM 2(t8)

characteristic: External Id

text: IBERS

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: LAM 2(t8)

text: Rumen microbiome

text: In-vitro fermention (RUSITEC)

text: Liquid fraction

text: United Kingdom

text: metagenome

characteristic: miscellaneous environmental package

text: bovine gut metagenome

text: WISE

text: bovine gut metagenome

text: PGM Ion-Torrent


ASC 2(t11)

characteristic: ENA-CHECKLIST

text: IBERS

text: public

text: ASC 2(t11)

characteristic: Submitter Id

characteristic: collection date

text: Rumen microbiome

text: In-vitro fermention (RUSITEC)

text: Liquid fraction

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: metagenome

characteristic: investigation type

text: bovine gut metagenome

characteristic: organism

text: WISE

characteristic: project name

text: bovine gut metagenome

text: PGM Ion-Torrent


ASC 3(t14)

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: IBERS

text: public

text: ASC 3(t14)

text: Rumen microbiome

characteristic: environment (biome)

text: In-vitro fermention (RUSITEC)

characteristic: environment (feature)

text: Liquid fraction

characteristic: environment (material)

text: United Kingdom

text: metagenome

text: bovine gut metagenome

text: WISE

text: bovine gut metagenome

text: PGM Ion-Torrent

characteristic: sequencing method

characteristic: title


LAM 3(t15)

characteristic: External Id

text: IBERS

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: LAM 3(t15)

text: Rumen microbiome

text: In-vitro fermention (RUSITEC)

text: Liquid fraction

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: bovine gut metagenome

text: WISE

text: bovine gut metagenome

text: PGM Ion-Torrent


CON 3(t16)

characteristic: ENA-CHECKLIST

text: IBERS

text: public

characteristic: SRA accession

text: CON 3(t16)

characteristic: Submitter Id

characteristic: collection date

text: Rumen microbiome

text: In-vitro fermention (RUSITEC)

text: Liquid fraction

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: metagenome

characteristic: investigation type

characteristic: miscellaneous environmental package

text: bovine gut metagenome

text: WISE

text: bovine gut metagenome

text: PGM Ion-Torrent


CON 4(t21)

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: IBERS

text: public

text: CON 4(t21)

text: Rumen microbiome

characteristic: environment (biome)

text: In-vitro fermention (RUSITEC)

characteristic: environment (feature)

text: Liquid fraction

characteristic: environment (material)

text: United Kingdom

text: metagenome

text: bovine gut metagenome

characteristic: organism

text: WISE

characteristic: project name

text: bovine gut metagenome

text: PGM Ion-Torrent


ASC 4(t22)

characteristic: External Id

text: IBERS

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ASC 4(t22)

text: Rumen microbiome

text: In-vitro fermention (RUSITEC)

text: Liquid fraction

text: United Kingdom

text: metagenome

text: bovine gut metagenome

text: WISE

text: bovine gut metagenome

text: PGM Ion-Torrent

characteristic: sequencing method

characteristic: title


LAM 4(t23)

characteristic: ENA-CHECKLIST

text: IBERS

text: public

characteristic: SRA accession

text: LAM 4(t23)

characteristic: Submitter Id

characteristic: collection date

text: Rumen microbiome

text: In-vitro fermention (RUSITEC)

text: Liquid fraction

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: bovine gut metagenome

text: WISE

text: bovine gut metagenome

text: PGM Ion-Torrent


ASC 1(t27)

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: IBERS

text: public

text: ASC 1(t27)

text: Rumen microbiome

characteristic: environment (biome)

text: In-vitro fermention (RUSITEC)

characteristic: environment (feature)

text: Liquid fraction

characteristic: environment (material)

text: United Kingdom

text: metagenome

characteristic: investigation type

characteristic: miscellaneous environmental package

text: bovine gut metagenome

text: WISE

text: bovine gut metagenome

text: PGM Ion-Torrent


CON 1(t29)

characteristic: External Id

text: IBERS

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: CON 1(t29)

text: Rumen microbiome

text: In-vitro fermention (RUSITEC)

text: Liquid fraction

text: United Kingdom

text: metagenome

text: bovine gut metagenome

characteristic: organism

text: WISE

characteristic: project name

text: bovine gut metagenome

text: PGM Ion-Torrent


LAM 1(t30)

characteristic: ENA-CHECKLIST

text: IBERS

text: public

characteristic: SRA accession

text: LAM 1(t30)

characteristic: Submitter Id

characteristic: collection date

text: Rumen microbiome

text: In-vitro fermention (RUSITEC)

text: Liquid fraction

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: metagenome

text: bovine gut metagenome

text: WISE

text: bovine gut metagenome

text: PGM Ion-Torrent

characteristic: sequencing method

characteristic: title


CON 2(t31)

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: IBERS

text: public

text: CON 2(t31)

text: Rumen microbiome

characteristic: environment (biome)

text: In-vitro fermention (RUSITEC)

characteristic: environment (feature)

text: Liquid fraction

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: bovine gut metagenome

text: WISE

text: bovine gut metagenome

text: PGM Ion-Torrent


LAM 2(t32)

characteristic: External Id

text: IBERS

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: LAM 2(t32)

text: Rumen microbiome

text: In-vitro fermention (RUSITEC)

text: Liquid fraction

text: United Kingdom

text: metagenome

characteristic: investigation type

characteristic: miscellaneous environmental package

text: bovine gut metagenome

text: WISE

text: bovine gut metagenome

text: PGM Ion-Torrent


ASC 2(t35)

characteristic: ENA-CHECKLIST

text: IBERS

text: public

characteristic: SRA accession

text: ASC 2(t35)

characteristic: Submitter Id

characteristic: collection date

text: Rumen microbiome

text: In-vitro fermention (RUSITEC)

text: Liquid fraction

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: metagenome

text: bovine gut metagenome

characteristic: organism

text: WISE

characteristic: project name

text: bovine gut metagenome

text: PGM Ion-Torrent


ASC 3(t38)

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: IBERS

text: public

text: ASC 3(t38)

text: Rumen microbiome

characteristic: environment (biome)

text: In-vitro fermention (RUSITEC)

characteristic: environment (feature)

text: Liquid fraction

characteristic: environment (material)

text: United Kingdom

text: metagenome

text: bovine gut metagenome

text: WISE

text: bovine gut metagenome

text: PGM Ion-Torrent

characteristic: sequencing method

characteristic: title


LAM 3(t39)

characteristic: External Id

text: IBERS

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: LAM 3(t39)

text: Rumen microbiome

text: In-vitro fermention (RUSITEC)

text: Liquid fraction

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: bovine gut metagenome

text: WISE

text: bovine gut metagenome

text: PGM Ion-Torrent


CON 3(t40)

characteristic: ENA-CHECKLIST

text: IBERS

text: public

characteristic: SRA accession

text: CON 3(t40)

characteristic: Submitter Id

characteristic: collection date

text: Rumen microbiome

text: In-vitro fermention (RUSITEC)

text: Liquid fraction

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: metagenome

characteristic: investigation type

characteristic: miscellaneous environmental package

text: bovine gut metagenome

text: WISE

text: bovine gut metagenome

text: PGM Ion-Torrent


CON 4(t45)

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: IBERS

text: public

text: CON 4(t45)

text: Rumen microbiome

characteristic: environment (biome)

text: In-vitro fermention (RUSITEC)

characteristic: environment (feature)

text: Liquid fraction

characteristic: environment (material)

text: United Kingdom

text: metagenome

text: bovine gut metagenome

characteristic: organism

text: WISE

characteristic: project name

text: bovine gut metagenome

text: PGM Ion-Torrent


ASC 4(t46)

characteristic: External Id

text: IBERS

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ASC 4(t46)

text: Rumen microbiome

text: In-vitro fermention (RUSITEC)

text: Liquid fraction

text: United Kingdom

text: metagenome

text: bovine gut metagenome

text: WISE

text: bovine gut metagenome

text: PGM Ion-Torrent

characteristic: sequencing method

characteristic: title


LAM 4(t47)

characteristic: ENA-CHECKLIST

text: IBERS

text: public

characteristic: SRA accession

text: LAM 4(t47)

characteristic: Submitter Id

characteristic: collection date

text: Rumen microbiome

text: In-vitro fermention (RUSITEC)

text: Liquid fraction

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: bovine gut metagenome

text: WISE

text: bovine gut metagenome

text: PGM Ion-Torrent


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Odessa National University

text: public

tag: Namespace:Odessa National University

text: Water sample collected from the second sampling site in Odessa region

characteristic: description

text: marine

characteristic: environment (biome)

text: surface water

characteristic: environment (feature)

text: seawater

characteristic: environment (material)

text: Ukraine

characteristic: geographic location (depth)

text: Odessa

characteristic: geographic location (region and locality)

text: metagenome

characteristic: investigation type

text: marine metagenome

characteristic: ph

text: Investigation of Black Sea water bacterial metagenome

text: marine metagenome

text: Shotgun sequencing

characteristic: temperature

text: Samples from the second location

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Odessa National University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Water sample collected from the first sampling site in Odessa region

text: marine

text: surface water

text: seawater

text: Ukraine

text: Odessa

text: metagenome

text: marine metagenome

characteristic: organism

characteristic: project name

text: marine metagenome

text: Shotgun sequencing

characteristic: sequencing method

text: Samples from the first location

characteristic: title

text: water


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Odessa National University

text: public

characteristic: collection date

text: Water sample collected from the third sampling site in Odessa region

characteristic: description

text: marine

characteristic: environment (biome)

text: surface water

characteristic: environment (feature)

text: seawater

characteristic: environment (material)

text: Ukraine

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Odessa

characteristic: geographic location (region and locality)

text: metagenome

text: marine metagenome

text: marine metagenome

text: Shotgun sequencing

text: Samples from the third location

text: water


characteristic: ENA-CHECKLIST

characteristic: External Id

text: NCKU

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: depth

text: subtropical grassland biome

text: dioxin contamination site

text: contaminated soil

text: Taiwan

characteristic: geographic location (elevation)

text: metagenome

characteristic: investigation type

text: soil metagenome

text: landfill reactor

text: soil metagenome

text: Amplicon sequencing

text: soil

characteristic: soil environmental package

text: pyrosequencing analysis for compost-amended hypoxic landfill reactors


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: AARHUS UNIVERSITY, DENMARK

text: public

tag: Namespace:AARHUS UNIVERSITY, DENMARK

characteristic: collection date

text: Prokaryotes

characteristic: environment (biome)

text: Waterworks

characteristic: environment (feature)

text: Sand filter

characteristic: environment (material)

text: Denmark

characteristic: geographic location (country and/or sea)

text: metagenome

text: metagenome

characteristic: organism

characteristic: project name

text: metagenome

text: misec

characteristic: sequencing method

characteristic: title

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:FONDAZIONE EDMUND MACH - COMPUTATIONAL BIOLOGY DEP

characteristic: Submitter Id

text: Italy

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: metagenome

text: Healthy human gut mycobiota

text: metagenome

text: 454 GS FLX Titanium

text: Healthy human gut mycobiota


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: FONDAZIONE EDMUND MACH - COMPUTATIONAL BIOLOGY DEP

text: public

characteristic: collection date

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: Italy

characteristic: geographic location (country and/or sea)

text: human-gut

text: metagenome

characteristic: investigation type

text: metagenome

text: Healthy human gut mycobiota

text: metagenome

text: 454 GS FLX Titanium

text: Healthy human gut mycobiota


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UNIVERSITY OF SHEFFIELD

characteristic: INSDC center name

text: public

tag: Namespace:UNIVERSITY OF SHEFFIELD

text: United Kingdom

text: Human

characteristic: host scientific name

characteristic: isolate

text: Corneal ulcer

characteristic: isolation source

text: Staphylococcus aureus

characteristic: organism

text: Staphylococcus aureus

characteristic: strain

text: S.aureus mreC deletion mutant revertant

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF SHEFFIELD

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: United Kingdom

text: Human

text: Corneal ulcer

text: Staphylococcus aureus

text: Staphylococcus aureus

text: S.aureus mreC deletion mutants and revertants


characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF SHEFFIELD

text: public

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Human

text: Corneal ulcer

text: Staphylococcus aureus

text: Staphylococcus aureus

text: S.aureus mreC deletion mutant


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Maastricht University Medical Centre

text: public

tag: Namespace:Maastricht University Medical Centre

characteristic: anonymized name

text: human

characteristic: common name

characteristic: description

text: organic matter

characteristic: environment (biome)

text: excreta

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Netherlands

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: Homo sapiens

text: disease activity

characteristic: project name

text: Homo sapiens

text: pyrosequencing

characteristic: sequencing method


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF FLORENCE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:UNIVERSITY OF FLORENCE

characteristic: Submitter Id

text: Mediterranean area

text: lowland

text: feces

text: Italy

unit: year

characteristic: host age

text: intestine

characteristic: host body site

characteristic: host subject id

text: human-gut

text: metagenome

text: metagenomes

characteristic: organism

text: Gut Microbiota of Juvenile Idiopathic Arthritis

text: metagenomes

text: pyrosequencing

text: Faecal Sample

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UNIVERSITY OF FLORENCE

text: public

characteristic: collection date

text: Mediterranean area

characteristic: environment (biome)

text: lowland

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Italy

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: intestine

text: 18 ERA

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: metagenomes

text: metagenomes

text: pyrosequencing

text: Faecal Sample


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF FLORENCE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Mediterranean area

text: lowland

text: feces

text: Italy

text: intestine

text: 19 ERA

text: human-gut

text: metagenome

characteristic: investigation type

text: metagenomes

characteristic: project name

text: metagenomes

text: pyrosequencing

characteristic: sequencing method

text: Faecal Sample


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Central Michigan University

text: public

tag: Namespace:Central Michigan University

characteristic: Submitter Id

characteristic: collection date

characteristic: depth

text: marine sediment metagenome

characteristic: description

text: Benthic marine sediment

characteristic: environment (biome)

text: marine sediment

text: Sediment

text: Antarctica

characteristic: geographic location (elevation)

text: metagenome

text: sediment metagenome

characteristic: organism

text: Antarctica Benthic Sediment

text: sediment metagenome

text: sediment

characteristic: sediment environmental package

text: Illumina MiSeq

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: TGAC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: green peach aphid

characteristic: common name

text: WGS

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: John Innes Centre, Norwich, UK

characteristic: lab host

text: Myzus persicae

text: Myzus persicae

text: Asexual female

characteristic: sex

text: Clone O

characteristic: strain

text: Myzus persicae clone O genome


root

characteristic: ENA-CHECKLIST

characteristic: External Id

text: MAX PLANCK INSTITUE OF CHEMCIAL ECOLOGY

text: public

characteristic: INSDC status

characteristic: SRA accession

text: root

tag: Namespace:MAX PLANCK INSTITUE OF CHEMCIAL ECOLOGY

characteristic: Submitter Id

characteristic: collection date

text: Great Basin Desert

text: New plot

characteristic: environment (feature)

text: roots

characteristic: environment (material)

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: coyote tobacco

characteristic: host common name

text: rosette-stage

characteristic: host life stage

text: mimarks-survey

characteristic: investigation type

text: Nicotiana attenuata

text: plant-associated

characteristic: plant-associated environmental package

text: root endophytes

characteristic: project name

text: Nicotiana attenuata

characteristic: sequencing method

text: EVICE


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: ISTITUTO SUPERIORE DI SANITA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:ISTITUTO SUPERIORE DI SANITA

text: Italy

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: human

characteristic: host scientific name

text: VTEC

characteristic: isolate

text: faeces

characteristic: isolation source

text: Escherichia coli

characteristic: organism

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: VTEC

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: ISTITUTO SUPERIORE DI SANITA

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Italy

text: healthy

text: cattle

text: VTEC

text: faeces

text: Escherichia coli

text: Escherichia coli

text: VTEC


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CUMICRO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: human

characteristic: common name

text: Cervical cerclage using braided suture material for the prevention of preterm birth induces significant disruption of vaginal microbial stability and increases inflammation leading to premature cervical remodeling and adverse pregnancy outcomes; a review of suture material used in cervical cerclage is warranted.

characteristic: description

text: Vagina

characteristic: environment (biome)

text: Preterm birth

characteristic: environment (feature)

text: Mid-vaginal swab samples

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-vaginal

characteristic: human vaginal environmental package

text: metagenome

characteristic: investigation type

text: Homo sapiens

text: Cervical cerclage using multifilament braided suture induces vaginal dysbiosis, inflammation and poor pregnancy outcome.

characteristic: project name

text: Homo sapiens

text: illumina miseq

characteristic: sequencing method


E. coli 10270

characteristic: ENA-CHECKLIST

characteristic: External Id

text: INSTITUTO NACIONAL DE SALUD

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E. coli 10270

tag: Namespace:INSTITUTO NACIONAL DE SALUD

characteristic: Submitter Id

text: E. coli with hypermucoviscous phenotype and multiresistant

text: Mexico

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: Human

characteristic: host scientific name

text: Escherichia coli

characteristic: isolate

text: Hepatic abscesses

characteristic: isolation source

text: Escherichia coli

characteristic: organism

text: Escherichia coli

characteristic: strain

text: Escherichia coli 10270

characteristic: title


tag: attribute

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SOUTHERNCROSSPLANTSCIENCE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: collection date

text: rice

characteristic: common name

text: leaf plant

characteristic: environment (biome)

text: suptropical

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Australia

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: Oryza sativa

text: plant-associated

characteristic: plant-associated environmental package

text: Rice phosphorus remobilisation

text: Oryza sativa

text: Illumina

text: Flag Leaf 6 days after anthesis


characteristic: ENA-CHECKLIST

characteristic: External Id

text: SOUTHERNCROSSPLANTSCIENCE

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: rice

text: leaf plant

text: suptropical

text: soil

text: Australia

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: Oryza sativa

text: plant-associated

text: Rice phosphorus remobilisation

characteristic: project name

text: Oryza sativa

text: Illumina

characteristic: sequencing method

text: Flag Leaf 15 days after anthesis


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CUMICRO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: collection date

text: human

characteristic: common name

text: It has been hypothesised that viral respiratory infections (VRI) may be linked with acquisition of new bacterial pathogens among patients with cystic fibrosis (CF). We performed a prospective study to determine whether VRI leads to a change in the respiratory microbiome of adults with CF.

characteristic: description

text: Lungs

text: Cystic Fibrosis

text: spontaneously expectorated sputum

text: United Kingdom

text: human-associated

characteristic: human associated environmental package

text: metagenome

text: Homo sapiens

characteristic: organism

text: The Impact of Viral Respiratory Infection on the Respiratory Microbiome of Adults with Cystic Fibrosis

text: Homo sapiens

text: Illumina MiSeq

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: SMU

characteristic: INSDC last update

text: public

text: animal

characteristic: environment (biome)

text: fecal

characteristic: environment (feature)

text: fecal

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: metagenome

text: animal

text: metagenome

text: Illumina MiSeq

text: animal


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: VTT

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: deep subsurface

text: Carbon steel surface

text: biofilm

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

text: metagenome

text: uncultured bacterium

text: Corrosion of CS

characteristic: project name

text: uncultured bacterium

text: 455 GS FLX Titanium

characteristic: sequencing method

text: Microbially induced corrosion of CS

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: External Id

text: MUMC

characteristic: INSDC last update

text: public

characteristic: anonymized name

characteristic: collection date

text: human

characteristic: common name

text: AN patient at admission

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: intestine environment

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Germany

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: homo sapiens

characteristic: organism

text: ANPRIEN

text: homo sapiens

text: MiSeq

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: MUMC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

text: AN patient upon discharge

text: human-associated habitat

text: intestine environment

text: feces

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

text: metagenome

characteristic: investigation type

text: homo sapiens

text: ANPRIEN

text: homo sapiens

text: MiSeq


characteristic: ENA-CHECKLIST

characteristic: External Id

text: MUMC

characteristic: INSDC last update

text: public

characteristic: anonymized name

characteristic: collection date

text: human

characteristic: common name

text: Healthy control

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: intestine environment

text: feces

text: Germany

text: human-gut

text: metagenome

text: homo sapiens

text: ANPRIEN

characteristic: project name

text: homo sapiens

text: MiSeq

characteristic: sequencing method


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: MUMC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: human

text: Quality Control

text: human-associated habitat

text: intestine environment

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Germany

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: homo sapiens

characteristic: organism

text: ANPRIEN

text: homo sapiens

text: MiSeq

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: IMPERIAL COLLEGE LONDON

characteristic: INSDC last update

text: public

characteristic: SRA accession

tag: Namespace:IMPERIAL COLLEGE LONDON

characteristic: Submitter Id

text: anatomical entity environment ENVO:2100000

text: Organic material ENVO:00010483

text: bodily fluid ENVO:02000019

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-associated

characteristic: human associated environmental package

text: metagenome

characteristic: investigation type

text: metagenome

text: antibiotic study

text: metagenome

text: Illumina Miseq


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: INSTITUTE OF FOOD RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:INSTITUTE OF FOOD RESEARCH

characteristic: collection date

text: Sample provided by Public Health England

characteristic: description

text: United Kingdom

text: environmental waters

characteristic: host scientific name

characteristic: isolate

text: environmental waters

characteristic: isolation source

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli H055260517


characteristic: ENA-CHECKLIST

characteristic: External Id

text: INSTITUTE OF FOOD RESEARCH

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: United Kingdom

text: environmental waters

text: environmental waters

text: Campylobacter coli

characteristic: organism

text: Campylobacter coli

text: Campylobacter coli H091320792

characteristic: title


text: INSTITUTE OF FOOD RESEARCH

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Sample provided by University of Swansea

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Duck

text: Duck

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli SWAN333


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: INSTITUTE OF FOOD RESEARCH

text: public

text: Sample provided by University of Liverpool

text: United Kingdom

text: Dairy Farm, Water

text: farm environment

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli EC3735


text: INSTITUTE OF FOOD RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: United Kingdom

text: Dairy Farm, Water

text: farm environment

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli EC3525


text: INSTITUTE OF FOOD RESEARCH

text: public

characteristic: collection date

characteristic: description

text: United Kingdom

text: Dairy Farm, Bootsock

text: farm environment

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli EC3615


text: INSTITUTE OF FOOD RESEARCH

text: public

text: United Kingdom

text: diseased

characteristic: host health state

text: Human

characteristic: host scientific name

characteristic: isolate

text: clinical

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli H060260417


characteristic: ENA-CHECKLIST

characteristic: External Id

text: INSTITUTE OF FOOD RESEARCH

text: public

text: United Kingdom

text: Bootsock, Great Harwood

text: soil

characteristic: isolation source

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli p495B


text: INSTITUTE OF FOOD RESEARCH

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: United Kingdom

text: diseased

text: Human

text: clinical

text: Campylobacter coli

characteristic: organism

text: Campylobacter coli

text: Campylobacter coli H133020651a


text: INSTITUTE OF FOOD RESEARCH

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Sample provided by University of Nottingham

text: United Kingdom

text: Chicken

text: Chicken

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli UNF491c

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: INSTITUTE OF FOOD RESEARCH

text: public

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Dairy Farm, Faecal

text: farm environment

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli EC5726


text: INSTITUTE OF FOOD RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: collection date

text: United Kingdom

text: Dairy Farm, Water

text: farm environment

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli EC3849


text: INSTITUTE OF FOOD RESEARCH

text: public

characteristic: description

text: United Kingdom

text: Dairy Farm, Faecal

characteristic: host scientific name

text: farm environment

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli EC4214


characteristic: ENA-CHECKLIST

text: INSTITUTE OF FOOD RESEARCH

text: public

text: United Kingdom

text: Dairy Farm, Water

characteristic: isolate

text: farm environment

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli EC3474


characteristic: External Id

text: INSTITUTE OF FOOD RESEARCH

text: public

text: United Kingdom

text: diseased

characteristic: host health state

text: Human

text: clinical

characteristic: isolation source

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli UNQMCIIS18a


text: INSTITUTE OF FOOD RESEARCH

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: United Kingdom

text: Dairy Farm, Bootsock

text: farm environment

text: Campylobacter coli

characteristic: organism

text: Campylobacter coli

text: Campylobacter coli EC3501


text: INSTITUTE OF FOOD RESEARCH

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: United Kingdom

text: Dairy Farm, Faecal

text: farm environment

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli EC5479

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: INSTITUTE OF FOOD RESEARCH

text: public

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: diseased

text: Human

text: clinical

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli H104860240


text: INSTITUTE OF FOOD RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: collection date

text: United Kingdom

text: Bootsock, Great Harwood

text: soil

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli p568B


characteristic: ENA-CHECKLIST

text: INSTITUTE OF FOOD RESEARCH

text: public

characteristic: description

text: United Kingdom

text: diseased

text: Human

characteristic: host scientific name

text: clinical

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli H131800148


characteristic: External Id

text: INSTITUTE OF FOOD RESEARCH

text: public

text: United Kingdom

text: Dairy Farm, Water

characteristic: isolate

text: farm environment

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli EC3731


text: INSTITUTE OF FOOD RESEARCH

characteristic: INSDC last update

text: public

text: United Kingdom

text: environmental waters

text: environmental waters

characteristic: isolation source

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli H081820599a


text: INSTITUTE OF FOOD RESEARCH

text: public

characteristic: INSDC status

text: United Kingdom

text: Bootsock, Urban Park

text: soil

text: Campylobacter coli

characteristic: organism

text: Campylobacter coli

text: Campylobacter coli W17A


text: INSTITUTE OF FOOD RESEARCH

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: United Kingdom

text: Dairy Farm, Water

text: farm environment

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli EC3607


characteristic: ENA-FIRST-PUBLIC

text: INSTITUTE OF FOOD RESEARCH

text: public

text: United Kingdom

text: environmental waters

text: environmental waters

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli H082560569

characteristic: title


characteristic: ENA-LAST-UPDATE

text: INSTITUTE OF FOOD RESEARCH

text: public

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: Human

text: clinical

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli H095340114a


text: INSTITUTE OF FOOD RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: collection date

text: United Kingdom

text: Dairy Farm, Bootsock

text: farm environment

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli EC3756


characteristic: ENA-CHECKLIST

text: INSTITUTE OF FOOD RESEARCH

text: public

characteristic: description

text: United Kingdom

text: Dairy Farm, Water

characteristic: host scientific name

text: farm environment

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli EC3529


characteristic: External Id

text: INSTITUTE OF FOOD RESEARCH

characteristic: INSDC last update

text: public

text: United Kingdom

text: Dairy Farm, Water

characteristic: isolate

text: farm environment

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli EC3389


text: INSTITUTE OF FOOD RESEARCH

text: public

characteristic: INSDC status

text: United Kingdom

text: Dairy Farm, Bootsock

text: farm environment

characteristic: isolation source

text: Campylobacter coli

characteristic: organism

text: Campylobacter coli

text: Campylobacter coli EC3748


characteristic: ENA-FIRST-PUBLIC

text: INSTITUTE OF FOOD RESEARCH

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: United Kingdom

text: diseased

text: Human

text: clinical

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli H130600457


characteristic: ENA-LAST-UPDATE

text: INSTITUTE OF FOOD RESEARCH

text: public

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Dairy Farm, Bootsock

text: farm environment

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli EC4060

characteristic: title


text: INSTITUTE OF FOOD RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: United Kingdom

text: Dairy Farm, Faecal

text: farm environment

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli EC4194


characteristic: ENA-CHECKLIST

text: INSTITUTE OF FOOD RESEARCH

text: public

characteristic: collection date

text: United Kingdom

text: Dairy Farm, Water

text: farm environment

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli EC3369


text: INSTITUTE OF FOOD RESEARCH

text: public

characteristic: description

text: United Kingdom

text: Dairy Farm, Water

characteristic: host scientific name

text: farm environment

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli EC3338


characteristic: External Id

text: INSTITUTE OF FOOD RESEARCH

characteristic: INSDC last update

text: public

text: United Kingdom

text: Bootsock, Great Harwood

text: soil

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli p515D


text: INSTITUTE OF FOOD RESEARCH

text: public

characteristic: INSDC status

text: United Kingdom

text: diseased

characteristic: host health state

text: Human

characteristic: isolate

text: clinical

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli H073180383


characteristic: ENA-FIRST-PUBLIC

text: INSTITUTE OF FOOD RESEARCH

text: public

text: United Kingdom

text: Dairy Farm, Bootsock

text: farm environment

characteristic: isolation source

text: Campylobacter coli

characteristic: organism

text: Campylobacter coli

text: Campylobacter coli EC3956


characteristic: ENA-LAST-UPDATE

text: INSTITUTE OF FOOD RESEARCH

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: United Kingdom

text: Dairy Farm, Bootsock

text: farm environment

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli EC3875


text: INSTITUTE OF FOOD RESEARCH

characteristic: INSDC center name

text: public

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Dairy Farm, Water

text: farm environment

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli EC3727

characteristic: title


characteristic: ENA-CHECKLIST

text: INSTITUTE OF FOOD RESEARCH

characteristic: INSDC first public

text: public

characteristic: collection date

text: United Kingdom

text: Dairy Farm, Water

text: farm environment

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli EC3619


characteristic: External Id

text: INSTITUTE OF FOOD RESEARCH

text: public

characteristic: description

text: United Kingdom

text: environmental waters

characteristic: host scientific name

text: environmental waters

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli H082280515


text: INSTITUTE OF FOOD RESEARCH

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: United Kingdom

text: Dairy Farm, Bootsock

text: farm environment

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli EC3879


characteristic: ENA-FIRST-PUBLIC

text: INSTITUTE OF FOOD RESEARCH

text: public

text: United Kingdom

text: Dairy Farm, Water

characteristic: isolate

text: farm environment

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli EC3370