characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: URMITE

text: public

text: Bacillus sp. Marseille-P2489

text: Bacillus sp. Marseille-P2489

text: Bacillus touaregensis genome

characteristic: title


status: PUBLIC

tag: attribute

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UZH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: fibrocyte-adipocyte progenitor cell

characteristic: cell type

text: house mouse

characteristic: common name

text: Protocols: Samples were collected at day 3 after cardiotoxin. RNA was isolated using TriZol and purified using Norgen RNA purification Kit Illumina Truseq™

characteristic: description

text: Mus musculus

characteristic: organism

text: Mus musculus

text: tibialis anterior

characteristic: organism part

text: Mus musculus

text: cardiotoxin injection

characteristic: stimulus

characteristic: strain

type: has member


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UZH

text: public

text: ArrayExpress

text: myogenic progenitor cell

text: house mouse

text: Mus musculus

text: Mus musculus

text: tibialis anterior

text: Mus musculus

text: cardiotoxin injection

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: THE MARINE BIOLOGICAL ASSOCIATION

characteristic: INSDC center name

text: public

tag: Namespace:THE MARINE BIOLOGICAL ASSOCIATION

text: marine metagenome

text: marine metagenome


text: THE MARINE BIOLOGICAL ASSOCIATION

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ARC_CTD48_16S: station S9 16S replicate 2

text: marine metagenome

text: marine metagenome


text: THE MARINE BIOLOGICAL ASSOCIATION

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ARC_CTD48_16S: Station S9 16S replicate 1

text: marine metagenome

text: marine metagenome


text: THE MARINE BIOLOGICAL ASSOCIATION

text: public

text: E_16S: Station S8 16S replicate 1

text: marine metagenome

text: marine metagenome


text: THE MARINE BIOLOGICAL ASSOCIATION

text: public

text: SO_BIO1_18S: Station S1a 18S replicate2

text: marine metagenome

text: marine metagenome


text: THE MARINE BIOLOGICAL ASSOCIATION

text: public

text: SO_BIO1T96_16S: Station S1b 16S replicate 1

text: marine metagenome

text: marine metagenome


text: THE MARINE BIOLOGICAL ASSOCIATION

text: public

text: SO_BIO1T96_16S: Station S1b 16S replicate 2

text: marine metagenome

text: marine metagenome


text: THE MARINE BIOLOGICAL ASSOCIATION

text: public

text: SO_BIO1T96_16S: Station S1b 16S replicate 3

text: marine metagenome

text: marine metagenome


text: THE MARINE BIOLOGICAL ASSOCIATION

text: public

text: SO_CTD1_16S: Station S2 16S replicate 1

text: marine metagenome

text: marine metagenome


text: THE MARINE BIOLOGICAL ASSOCIATION

text: public

text: SO_CTD1_16S: Station S2 16S replicate 3

text: marine metagenome

text: marine metagenome


text: THE MARINE BIOLOGICAL ASSOCIATION

text: public

text: SO_CTD1_16S: Station S2 16S replicate 2

text: marine metagenome

text: marine metagenome


text: THE MARINE BIOLOGICAL ASSOCIATION

text: public

text: SO_CTD111_18S: Station S5 18S replicate 2

text: marine metagenome

text: marine metagenome


text: THE MARINE BIOLOGICAL ASSOCIATION

text: public

text: SO_CTD111_18S: Station S5 18S replicate 1

text: marine metagenome

text: marine metagenome


text: THE MARINE BIOLOGICAL ASSOCIATION

text: public

text: SO_CTD119_16S: Station S6 16S replicate 1

text: marine metagenome

text: marine metagenome


text: THE MARINE BIOLOGICAL ASSOCIATION

text: public

text: SO_CTD119_16S: Station S6 16S replicate 2

text: marine metagenome

text: marine metagenome


text: THE MARINE BIOLOGICAL ASSOCIATION

text: public

text: SO_CTD119_18S: Station S6 18S replicate 3

text: marine metagenome

text: marine metagenome


text: THE MARINE BIOLOGICAL ASSOCIATION

text: public

text: SO_CTD69_16S: Station S3 16S replicate 2

text: marine metagenome

text: marine metagenome


text: THE MARINE BIOLOGICAL ASSOCIATION

text: public

text: SO_CTD69_16S: Station S3 16S replicate3

text: marine metagenome

text: marine metagenome


text: THE MARINE BIOLOGICAL ASSOCIATION

text: public

text: marine metagenome

text: marine metagenome


text: THE MARINE BIOLOGICAL ASSOCIATION

text: public

text: SO_CTD69_18S: Station S3 18S replicate 3

text: marine metagenome

text: marine metagenome


text: THE MARINE BIOLOGICAL ASSOCIATION

text: public

text: SO_CTD69_18S: Station S3 18S replicate 2

text: marine metagenome

text: marine metagenome


text: THE MARINE BIOLOGICAL ASSOCIATION

text: public

text: SO_CTD71_16S: Station S4 16S replicate 1

text: marine metagenome

text: marine metagenome


text: THE MARINE BIOLOGICAL ASSOCIATION

text: public

text: SO_CTD71_16S: Station S4 16S replicate 2

text: marine metagenome

text: marine metagenome


text: THE MARINE BIOLOGICAL ASSOCIATION

text: public

text: SO_CTD71_18S: Station S4 18S replicate 3

text: marine metagenome

text: marine metagenome


text: THE MARINE BIOLOGICAL ASSOCIATION

text: public

text: SO_CTD71_18S: Station S4 18S replicate 2

text: marine metagenome

text: marine metagenome


text: UNIVERSITY OF LIEGE - BELGIUM

text: public

tag: Namespace:UNIVERSITY OF LIEGE - BELGIUM

text: white-footed mouse

characteristic: common name

characteristic: forward

text: Peromyscus leucopus

characteristic: reverse

characteristic: run

text: Peromyscus leucopus

text: Male

characteristic: sex

characteristic: site

text: liver

characteristic: tissue


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF LIEGE - BELGIUM

text: public

text: white-footed mouse

text: Peromyscus leucopus

characteristic: organism

text: Peromyscus leucopus

text: Female

text: liver


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF LIEGE - BELGIUM

text: public

text: white-footed mouse

text: Peromyscus leucopus

text: Peromyscus leucopus

text: male

text: liver

characteristic: title


text: UNIVERSITY OF LIEGE - BELGIUM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: white-footed mouse

text: Peromyscus leucopus

text: Peromyscus leucopus

text: female

text: liver


text: UNIVERSITY OF LIEGE - BELGIUM

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: white-footed mouse

text: Peromyscus leucopus

text: Peromyscus leucopus

text: female

text: liver


text: UNIVERSITY OF LIEGE - BELGIUM

text: public

text: white-footed mouse

characteristic: common name

characteristic: forward

text: Peromyscus leucopus

characteristic: reverse

text: Peromyscus leucopus

text: liver


text: UNIVERSITY OF LIEGE - BELGIUM

text: public

text: white-footed mouse

text: Peromyscus leucopus

characteristic: run

text: Peromyscus leucopus

characteristic: sex

characteristic: site

text: control


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF LIEGE - BELGIUM

text: public

text: white-footed mouse

text: Peromyscus leucopus

text: Peromyscus leucopus

text: Male

text: lung

characteristic: tissue


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF LIEGE - BELGIUM

text: public

text: white-footed mouse

text: Peromyscus leucopus

characteristic: organism

text: Peromyscus leucopus

text: male

text: lung


text: UNIVERSITY OF LIEGE - BELGIUM

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: white-footed mouse

text: Peromyscus leucopus

text: Peromyscus leucopus

text: lung

characteristic: title


text: UNIVERSITY OF LIEGE - BELGIUM

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: white-footed mouse

text: Peromyscus leucopus

text: Peromyscus leucopus

text: Female

text: lung


pblanc

text: UNIVERSITY OF LIEGE - BELGIUM

text: public

text: pblanc

characteristic: Submitter Id

text: white-footed mouse

characteristic: common name

characteristic: forward

text: Peromyscus leucopus

text: Peromyscus leucopus

text: control


text: UNIVERSITY OF LIEGE - BELGIUM

text: public

text: white-footed mouse

text: Peromyscus leucopus

characteristic: reverse

characteristic: run

text: Peromyscus leucopus

text: Male

characteristic: sex

text: Spleen


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF LIEGE - BELGIUM

text: public

text: white-footed mouse

text: Peromyscus leucopus

text: Peromyscus leucopus

text: male

characteristic: site

text: Spleen


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF LIEGE - BELGIUM

text: public

text: white-footed mouse

text: Peromyscus leucopus

text: Peromyscus leucopus

text: Spleen

characteristic: tissue


text: UNIVERSITY OF LIEGE - BELGIUM

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: white-footed mouse

text: Peromyscus leucopus

characteristic: organism

text: Peromyscus leucopus

text: Female

text: Spleen


rblanc

text: UNIVERSITY OF LIEGE - BELGIUM

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: rblanc

text: white-footed mouse

text: Peromyscus leucopus

text: Peromyscus leucopus

text: control

characteristic: title


text: UNIVERSITY OF LIEGE - BELGIUM

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: white-footed mouse

characteristic: common name

text: Peromyscus leucopus

text: Peromyscus leucopus

text: mock


pcrblanc

text: UNIVERSITY OF LIEGE - BELGIUM

text: public

text: pcrblanc

text: white-footed mouse

characteristic: forward

text: Peromyscus leucopus

characteristic: reverse

characteristic: run

text: Peromyscus leucopus

text: control


Blanc-PCR

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF LIEGE - BELGIUM

text: public

text: Blanc-PCR

text: white-footed mouse

text: Peromyscus leucopus

text: Peromyscus leucopus

characteristic: sex

text: control


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: URMITE

text: public

text: Bacteroides sp. Marseille-P2824

text: Bacteroides sp. Marseille-P2824

characteristic: strain

text: Bacteroides ihumii genome


text: human gut metagenome

characteristic: ArrayExpress-Species

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: human gut metagenome

text: human gut metagenome

text: human gut metagenome


text: Knomics LLC

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:Knomics LLC

characteristic: collection date

text: human microbiome

characteristic: environment (biome)

text: intestine environment

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Russia

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

characteristic: organism

text: OMGpilot

characteristic: project name

text: human gut metagenome

text: 16S sequencing

characteristic: sequencing method

text: Healthy human gut 16S metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: URMITE

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Enterococcus sp. Marseille-P2817

text: Enterococcus sp. Marseille-P2817

characteristic: strain

text: Enterococcus timonensis genome

characteristic: title


text: URMITE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Leptotrichia sp. Marseille-P3007

text: Leptotrichia sp. Marseille-P3007

text: Leptotrichia massiliensis genome


text: UNIBE-ISME

text: public

text: Warmblood

characteristic: breed

text: horse

characteristic: common name

text: Equus caballus

text: Equus caballus

text: serum

characteristic: tissue type

text: Equine serum


text: URMITE

text: public

text: Anaerotruncus sp. Marseille-P2769

characteristic: organism

text: Anaerotruncus sp. Marseille-P2769

text: Phocea massiliensis genome


text: URMITE

text: public

text: Ruminococcaceae bacterium Marseille-P2935

text: Massilioculturomica massiliensis genome


text: URMITE

text: public

text: Alistipes sp. Marseille-P3084

text: Alistipes sp. Marseille-P3084

text: Tidjanibacter massiliensis genome


GW

text: TEXAS A&M CORPUS CHRISTI

text: public

text: GW

tag: Namespace:TEXAS A&M CORPUS CHRISTI

characteristic: collection date

text: Coastal Bay

characteristic: environment (biome)

text: Marine

characteristic: environment (feature)

text: Water

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

unit: m

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: metagenome

text: Texas Bay Metagenomes

characteristic: project name

text: metagenome

text: Illumina HiSeq 2500

characteristic: sequencing method

text: Galveston

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: URMITE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Tyzzerella sp. Marseille-P3062

text: Tyzzerella sp. Marseille-P3062

characteristic: strain

text: Tyzzerella massiliensis genome

characteristic: title


text: TEXAS A&M CORPUS CHRISTI

text: public

characteristic: collection date

text: Coastal Bay

characteristic: environment (biome)

text: Marine

characteristic: environment (feature)

text: Oyster Gut Contents

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: miscellaneous natural or artificial environment

characteristic: miscellaneous environmental package

text: metagenome

characteristic: organism

text: Texas Bay Metagenomes

text: metagenome

text: Illumina HiSeq 2500

text: Galveston Oysters


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: URMITE

characteristic: INSDC center name

text: public

text: Dielma sp. Marseille-P3110

text: Dielma sp. Marseille-P3110

text: Traorella massiliensis genome


text: TEXAS A&M CORPUS CHRISTI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Coastal Bay

text: Marine

text: Oyster Gut Contents

text: USA

text: metagenome

characteristic: investigation type

text: metagenome

text: Texas Bay Metagenomes

characteristic: project name

text: metagenome

text: Illumina HiSeq 2500

characteristic: sequencing method

text: Copano Oysters


text: URMITE

text: public

text: Mogibacterium sp. Marseille-P3115

text: Mogibacterium sp. Marseille-P3115

characteristic: strain

text: Ileobacterium massiliense genome

characteristic: title


CW

text: TEXAS A&M CORPUS CHRISTI

text: public

text: CW

characteristic: collection date

text: Coastal Bay

characteristic: environment (biome)

text: Marine

characteristic: environment (feature)

text: Water

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: metagenome

text: Texas Bay Metagenomes

text: metagenome

text: Illumina HiSeq 2500

text: Copano

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: TEXAS A&M CORPUS CHRISTI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Coastal Bay

text: Marine

text: Oyster Gut Contents

text: USA

text: metagenome

characteristic: miscellaneous environmental package

text: metagenome

characteristic: organism

text: Texas Bay Metagenomes

text: metagenome

text: Illumina HiSeq 2500

text: Nueces Oysters


text: URMITE

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Ruminococcus sp. Marseille-P3213

text: Ruminococcus sp. Marseille-P3213

characteristic: strain

text: Negativibacillus massiliensis genome

characteristic: title


NW

text: TEXAS A&M CORPUS CHRISTI

text: public

text: NW

characteristic: collection date

text: Coastal Bay

characteristic: environment (biome)

text: Marine

characteristic: environment (feature)

text: Water

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: metagenome

characteristic: investigation type

text: metagenome

text: Texas Bay Metagenomes

characteristic: project name

text: metagenome

text: Illumina HiSeq 2500

characteristic: sequencing method

text: Nueces

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: URMITE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Rikenella sp. Marseille-P3215

text: Rikenella sp. Marseille-P3215

text: Millionella massiliensis genome


text: TEXAS A&M CORPUS CHRISTI

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Channel

characteristic: environment (biome)

text: Marine

text: Oyster Gut Contents

text: USA

characteristic: geographic location (longitude)

text: metagenome

characteristic: miscellaneous environmental package

text: metagenome

characteristic: organism

text: Texas Bay Metagenomes

text: metagenome

text: Illumina HiSeq 2500

text: Packery Oysters

characteristic: title


text: URMITE

text: public

text: Ruminococcus sp. Marseille-P3217

text: Ruminococcus sp. Marseille-P3217

characteristic: strain

text: Durandella massiliensis genome


PW

characteristic: ENA-CHECKLIST

text: TEXAS A&M CORPUS CHRISTI

text: public

text: PW

text: Channel

text: Marine

characteristic: environment (feature)

text: Water

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: metagenome

characteristic: investigation type

text: metagenome

text: Texas Bay Metagenomes

characteristic: project name

text: metagenome

text: Illumina HiSeq 2500

characteristic: sequencing method

text: Packery Water

text: water

characteristic: water environmental package


E-MTAB-51311476912482:Sample 1136

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMBL-EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-51311476912482:Sample 1136

characteristic: Submitter Id

unit: week

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: Protocols: Trizol extraction as described in Wang L, Si Y, Dedow LK, Shao Y, Liu P, et al. (2011) A Low-Cost Library Construction Protocol and Data Analysis Pipeline for Illumina-Based Strand- Specific Multiplex RNA-Seq. PLoS ONE 6(10): e26426. doi:10.1371/journal.pone.0026426 Illumina-compatible (GAIIx and HiSeq2000 platforms) RNA-seq libraries as described in Wang L, Si Y, Dedow LK, Shao Y, Liu P, et al. (2011) A Low-Cost Library Construction Protocol and Data Analysis Pipeline for Illumina-Based Strand- Specific Multiplex RNA-Seq. PLoS ONE 6(10): e26426. doi:10.1371/journal.pone.0026426

characteristic: description

text: wild type genotype

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: abdominal muscle

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

text: Sample 1136


E-MTAB-51311476912482:Sample 1137

characteristic: ENA-CHECKLIST

text: EMBL-EBI

text: public

text: E-MTAB-51311476912482:Sample 1137

text: ArrayExpress

text: house mouse

text: wild type genotype

text: Mus musculus

characteristic: organism

text: Mus musculus

text: abdominal muscle

text: Mus musculus

text: male

characteristic: strain

text: Sample 1137

characteristic: title


E-MTAB-51311476912482:Sample 1138

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMBL-EBI

characteristic: INSDC center name

text: public

text: E-MTAB-51311476912482:Sample 1138

text: ArrayExpress

text: house mouse

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: abdominal muscle

text: Mus musculus

text: male

text: Sample 1138


E-MTAB-51311476912482:Sample 1139

text: EMBL-EBI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-51311476912482:Sample 1139

text: ArrayExpress

text: house mouse

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: abdominal muscle

text: Mus musculus

text: male

text: Sample 1139


E-MTAB-51311476912482:Sample 1140

text: EMBL-EBI

text: public

text: E-MTAB-51311476912482:Sample 1140

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: abdominal muscle

text: Mus musculus

text: male

text: Sample 1140


E-MTAB-51311476912482:Sample 1141

text: EMBL-EBI

text: public

text: E-MTAB-51311476912482:Sample 1141

text: ArrayExpress

text: house mouse

characteristic: description

text: wild type genotype

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: cardiac ventricle

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

text: Sample 1141


E-MTAB-51311476912482:Sample 1142

characteristic: ENA-CHECKLIST

text: EMBL-EBI

text: public

text: E-MTAB-51311476912482:Sample 1142

text: ArrayExpress

text: house mouse

text: wild type genotype

text: Mus musculus

characteristic: organism

text: Mus musculus

text: cardiac ventricle

text: Mus musculus

text: male

characteristic: strain

text: Sample 1142

characteristic: title


E-MTAB-51311476912482:Sample 1143

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMBL-EBI

characteristic: INSDC center name

text: public

text: E-MTAB-51311476912482:Sample 1143

text: ArrayExpress

text: house mouse

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: cardiac ventricle

text: Mus musculus

text: male

text: Sample 1143


E-MTAB-51311476912482:Sample 1144

text: EMBL-EBI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-51311476912482:Sample 1144

text: ArrayExpress

text: house mouse

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: cardiac ventricle

text: Mus musculus

text: male

text: Sample 1144


text: SOUTHWEST UNIVERSITY FOR NATIONALITIES

text: public

tag: Namespace:SOUTHWEST UNIVERSITY FOR NATIONALITIES

characteristic: Submitter Id

characteristic: collection date

characteristic: depth

text: 10g m-2 CO(NH2)2 (46.65% N) treatment in the 0-10 cm soil layer

text: alpine meadowed

characteristic: environment (biome)

text: alpine meadowed

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: bacterial mixed RNA library

text: 16S rRNA sequencing

characteristic: project name

text: bacterial mixed RNA library

text: Miseq sequencing

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: Bacterial community


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SOUTHWEST UNIVERSITY FOR NATIONALITIES

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: 10g m-2 CO(NH2)2 (46.65% N) treatment in the 10-20 cm soil layer

characteristic: description

text: alpine meadowed

text: alpine meadowed

text: soil

text: China

text: metagenome

text: bacterial mixed RNA library

characteristic: organism

text: 16S rRNA sequencing

text: bacterial mixed RNA library

text: Miseq sequencing

text: soil

text: Bacterial community

characteristic: title


text: SOUTHWEST UNIVERSITY FOR NATIONALITIES

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: depth

text: 20g m-2 CO(NH2)2 (46.65% N) treatment in the 0-10 cm soil layer

text: alpine meadowed

characteristic: environment (biome)

text: alpine meadowed

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

text: metagenome

text: bacterial mixed RNA library

text: 16S rRNA sequencing

text: bacterial mixed RNA library

text: Miseq sequencing

text: soil

text: Bacterial community


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SOUTHWEST UNIVERSITY FOR NATIONALITIES

text: public

text: 20g m-2 CO(NH2)2 (46.65% N) treatment in the 10-20 cm soil layer

text: alpine meadowed

text: alpine meadowed

text: soil

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: bacterial mixed RNA library

text: 16S rRNA sequencing

characteristic: project name

text: bacterial mixed RNA library

text: Miseq sequencing

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: Bacterial community


text: SOUTHWEST UNIVERSITY FOR NATIONALITIES

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: 30g m-2 CO(NH2)2 (46.65% N) treatment in the 0-10 cm soil layer

characteristic: description

text: alpine meadowed

text: alpine meadowed

text: soil

text: China

text: metagenome

text: bacterial mixed RNA library

characteristic: organism

text: 16S rRNA sequencing

text: bacterial mixed RNA library

text: Miseq sequencing

text: soil

text: Bacterial community

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SOUTHWEST UNIVERSITY FOR NATIONALITIES

text: public

characteristic: depth

text: 30g m-2 CO(NH2)2 (46.65% N) treatment in the 10-20 cm soil layer

text: alpine meadowed

characteristic: environment (biome)

text: alpine meadowed

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

text: metagenome

text: bacterial mixed RNA library

text: 16S rRNA sequencing

text: bacterial mixed RNA library

text: Miseq sequencing

text: soil

text: Bacterial community


text: SOUTHWEST UNIVERSITY FOR NATIONALITIES

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: 10g m-2 Ca(H2PO4)2��H2O ��16% P2O5�� treatment in the 0-10 cm soil layer

text: alpine meadowed

text: alpine meadowed

text: soil

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: bacterial mixed RNA library

text: 16S rRNA sequencing

characteristic: project name

text: bacterial mixed RNA library

text: Miseq sequencing

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: Bacterial community


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SOUTHWEST UNIVERSITY FOR NATIONALITIES

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: 10g m-2 Ca(H2PO4)2��H2O ��16% P2O5�� treatment in the 10-20 cm soil layer

characteristic: description

text: alpine meadowed

text: alpine meadowed

text: soil

text: China

text: metagenome

text: bacterial mixed RNA library

characteristic: organism

text: 16S rRNA sequencing

text: bacterial mixed RNA library

text: Miseq sequencing

text: soil

text: Bacterial community

characteristic: title


text: SOUTHWEST UNIVERSITY FOR NATIONALITIES

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: depth

text: 20g m-2 Ca(H2PO4)2��H2O ��16% P2O5�� treatment in the 0-10 cm soil layer

text: alpine meadowed

characteristic: environment (biome)

text: alpine meadowed

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

text: metagenome

text: bacterial mixed RNA library

text: 16S rRNA sequencing

text: bacterial mixed RNA library

text: Miseq sequencing

text: soil

text: Bacterial community


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SOUTHWEST UNIVERSITY FOR NATIONALITIES

text: public

text: 20g m-2 Ca(H2PO4)2��H2O ��16% P2O5�� treatment in the 10-20 cm soil layer

text: alpine meadowed

text: alpine meadowed

text: soil

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: bacterial mixed RNA library

text: 16S rRNA sequencing

characteristic: project name

text: bacterial mixed RNA library

text: Miseq sequencing

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: Bacterial community


text: SOUTHWEST UNIVERSITY FOR NATIONALITIES

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: 30g m-2 Ca(H2PO4)2��H2O ��16% P2O5�� treatment in the 0-10 cm soil layer

characteristic: description

text: alpine meadowed

text: alpine meadowed

text: soil

text: China

text: metagenome

text: bacterial mixed RNA library

characteristic: organism

text: 16S rRNA sequencing

text: bacterial mixed RNA library

text: Miseq sequencing

text: soil

text: Bacterial community

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SOUTHWEST UNIVERSITY FOR NATIONALITIES

text: public

characteristic: depth

text: 30g m-2 Ca(H2PO4)2��H2O ��16% P2O5�� treatment in the 10-20 cm soil layer

text: alpine meadowed

characteristic: environment (biome)

text: alpine meadowed

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

text: metagenome

text: bacterial mixed RNA library

text: 16S rRNA sequencing

text: bacterial mixed RNA library

text: Miseq sequencing

text: soil

text: Bacterial community


text: SOUTHWEST UNIVERSITY FOR NATIONALITIES

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: 5g m-2 CO(NH2)2 (46.65% N) and 5g m-2Ca(H2PO4)2��H2O ��16% P2O5�� treatment in the 0-10 cm soil layer

text: alpine meadowed

text: alpine meadowed

text: soil

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: bacterial mixed RNA library

text: 16S rRNA sequencing

characteristic: project name

text: bacterial mixed RNA library

text: Miseq sequencing

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: Bacterial community


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SOUTHWEST UNIVERSITY FOR NATIONALITIES

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: 5g m-2 CO(NH2)2 (46.65% N) and 5 g m-2Ca(H2PO4)2��H2O ��16% P2O5�� treatment in the 10-20 cm soil layer

characteristic: description

text: alpine meadowed

text: alpine meadowed

text: soil

text: China

text: metagenome

text: bacterial mixed RNA library

characteristic: organism

text: 16S rRNA sequencing

text: bacterial mixed RNA library

text: Miseq sequencing

text: soil

text: Bacterial community

characteristic: title


text: SOUTHWEST UNIVERSITY FOR NATIONALITIES

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: depth

text: 10g m-2 CO(NH2)2 (46.65% N) and 10g m-2Ca(H2PO4)2��H2O ��16% P2O5�� treatment in the 0-10 cm soil layer

text: alpine meadowed

characteristic: environment (biome)

text: alpine meadowed

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

text: metagenome

text: bacterial mixed RNA library

text: 16S rRNA sequencing

text: bacterial mixed RNA library

text: Miseq sequencing

text: soil

text: Bacterial community


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SOUTHWEST UNIVERSITY FOR NATIONALITIES

text: public

text: 10g m-2 CO(NH2)2 (46.65% N) and 10 g m-2Ca(H2PO4)2��H2O ��16% P2O5�� treatment in the 10-20 cm soil layer

text: alpine meadowed

text: alpine meadowed

text: soil

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: bacterial mixed RNA library

text: 16S rRNA sequencing

characteristic: project name

text: bacterial mixed RNA library

text: Miseq sequencing

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: Bacterial community


text: SOUTHWEST UNIVERSITY FOR NATIONALITIES

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: 15g m-2 CO(NH2)2 (46.65% N) and 15g m-2Ca(H2PO4)2��H2O ��16% P2O5�� treatment in the 0-10 cm soil layer

characteristic: description

text: alpine meadowed

text: alpine meadowed

text: soil

text: China

text: metagenome

text: bacterial mixed RNA library

characteristic: organism

text: 16S rRNA sequencing

text: bacterial mixed RNA library

text: Miseq sequencing

text: soil

text: Bacterial community

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SOUTHWEST UNIVERSITY FOR NATIONALITIES

text: public

characteristic: depth

text: 15g m-2 CO(NH2)2 (46.65% N) and 15g m-2 Ca(H2PO4)2��H2O ��16% P2O5�� treatment in the 10-20 cm soil layer

text: alpine meadowed

characteristic: environment (biome)

text: alpine meadowed

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

text: metagenome

text: bacterial mixed RNA library

text: 16S rRNA sequencing

text: bacterial mixed RNA library

text: Miseq sequencing

text: soil

text: Bacterial community


text: SOUTHWEST UNIVERSITY FOR NATIONALITIES

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: 0 g m-2 in treatment in the 0-10 cm soil layer

text: alpine meadowed

text: alpine meadowed

text: soil

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: bacterial mixed RNA library

text: 16S rRNA sequencing

characteristic: project name

text: bacterial mixed RNA library

text: Miseq sequencing

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: Bacterial community


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SOUTHWEST UNIVERSITY FOR NATIONALITIES

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: 1 g m-2 in treatment in the 0-10 cm soil layer

characteristic: description

text: alpine meadowed

text: alpine meadowed

text: soil

text: China

text: metagenome

text: bacterial mixed RNA library

characteristic: organism

text: 16S rRNA sequencing

text: bacterial mixed RNA library

text: Miseq sequencing

text: soil

text: Bacterial community

characteristic: title


text: SOUTHWEST UNIVERSITY FOR NATIONALITIES

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: depth

text: 2 g m-2 in treatment in the 0-10 cm soil layer

text: alpine meadowed

characteristic: environment (biome)

text: alpine meadowed

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

text: metagenome

text: bacterial mixed RNA library

text: 16S rRNA sequencing

text: bacterial mixed RNA library

text: Miseq sequencing

text: soil

text: Bacterial community


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SOUTHWEST UNIVERSITY FOR NATIONALITIES

text: public

text: 2 g m-2 in treatment in the 10-20 cm soil layer

text: alpine meadowed

text: alpine meadowed

text: soil

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: bacterial mixed RNA library

text: 16S rRNA sequencing

characteristic: project name

text: bacterial mixed RNA library

text: Miseq sequencing

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: Bacterial community


text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Denmark

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Escherichia coli

characteristic: organism

text: Escherichia coli

characteristic: serovar

text: Historical Danish E coli outbreaks

characteristic: title


LFI 5006

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF TROMSO

text: public

text: LFI 5006

tag: Namespace:UNIVERSITY OF TROMSO

text: Norway

characteristic: geographic location (country and/or sea)

text: Salmo salar

characteristic: host

text: LFI 5006

text: Moritella viscosa

text: Moritella viscosa

text: M. viscosa strain LFI 5006 obtained from S. salar


NVI 3632

text: UNIVERSITY OF TROMSO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: NVI 3632

characteristic: Submitter Id

text: Norway

text: Salmo salar

text: NVI 3632

text: Moritella viscosa

text: Moritella viscosa

text: M. viscosa strain NVI 3632 obtained from S. salar


text: UNIVERSITY OF TROMSO

text: public

characteristic: collection date

text: Norway

text: Salmo salar

text: Moritella viscosa

text: Moritella viscosa

text: M. viscosa strain 06/09/139 obtained from S. salar


text: UNIVERSITY OF TROMSO

text: public

text: Iceland

text: Salmo salar

characteristic: isolate

text: Moritella viscosa

text: Moritella viscosa

text: M. viscosa strain K58 obtained from S. salar


text: UNIVERSITY OF TROMSO

text: public

text: Iceland

text: Salmo salar

text: Moritella viscosa

characteristic: organism

text: Moritella viscosa

text: M. viscosa strain K56 obtained from S. salar


MT 2528

text: UNIVERSITY OF TROMSO

text: public

text: MT 2528

text: United Kingdom

text: Salmo salar

text: MT 2528

text: Moritella viscosa

text: Moritella viscosa

text: M. viscosa strain MT 2528 obtained from S. salar


text: UNIVERSITY OF TROMSO

text: public

text: Canada

text: Salmo salar

text: Moritella viscosa

text: Moritella viscosa

text: M. viscosa strain Vvi-11 obtained from S. salar


text: UNIVERSITY OF TROMSO

text: public

text: Canada

text: Salmo salar

text: Moritella viscosa

text: Moritella viscosa

text: M. viscosa strain Vvi-7 obtained from S. salar


NVI 4917

text: UNIVERSITY OF TROMSO

text: public

text: NVI 4917

text: Norway

text: Oncorhynchus mykiss

text: NVI 4917

text: Moritella viscosa

text: Moritella viscosa

text: M. viscosa strain NVI 4917 obtained from O. mykiss


NVI 5450

text: UNIVERSITY OF TROMSO

text: public

text: NVI 5450

text: Norway

text: Oncorhynchus mykiss

text: Moritella viscosa

text: Moritella viscosa

text: M. viscosa strain NVI 5450 obtained from O. mykiss


NVI 5482

text: UNIVERSITY OF TROMSO

text: public

text: NVI 5482

text: Norway

text: Gadus morhua

text: Moritella viscosa

text: Moritella viscosa

text: M. viscosa strain NVI 5482 obtained from G. morhua


text: UNIVERSITY OF TROMSO

text: public

text: Iceland

text: Cyclopterus lumpus

text: Moritella viscosa

text: Moritella viscosa

text: M. viscosa strain F57 obtained from C. lumpus


text: UNIVERSITY OF LIVERPOOL

text: public

tag: Namespace:UNIVERSITY OF LIVERPOOL

text: domestic pig

characteristic: common name

text: Pig gastrointestinal tract

characteristic: environment (biome)

text: Caecum

characteristic: environment (feature)

text: mucosal scraping

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Leahurst Campus, Neston

characteristic: geographic location (region and locality)

text: pig

characteristic: host common name

text: BD

characteristic: host diet

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: Sus scrofa domesticus

text: Swine mucosa-associated gut microbiota

characteristic: project name

text: Sus scrofa domesticus

text: Illumina MiSeq paired-end 250bp

characteristic: sequencing method

text: Caecal mucosal scraping


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF LIVERPOOL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: domestic pig

text: Pig gastrointestinal tract

text: Proximal colon

text: mucosal scraping

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Leahurst Campus, Neston

text: pig

text: BD

text: host-associated

text: mimarks-survey

text: Sus scrofa domesticus

text: Swine mucosa-associated gut microbiota

text: Sus scrofa domesticus

text: Illumina MiSeq paired-end 250bp

text: Proximal colon mucosal scraping

characteristic: title


text: UNIVERSITY OF LIVERPOOL

text: public

text: domestic pig

characteristic: common name

text: Pig gastrointestinal tract

characteristic: environment (biome)

text: Distal colon

characteristic: environment (feature)

text: mucosal scraping

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Leahurst Campus, Neston

characteristic: geographic location (region and locality)

text: pig

characteristic: host common name

text: BD

characteristic: host diet

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: Sus scrofa domesticus

characteristic: organism

text: Swine mucosa-associated gut microbiota

text: Sus scrofa domesticus

text: Illumina MiSeq paired-end 250bp

text: Distal colon mucosal scraping


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF LIVERPOOL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: domestic pig

text: Pig gastrointestinal tract

text: Caecum

text: mucosal scraping

text: United Kingdom

text: Leahurst Campus, Neston

text: pig

text: BD+S

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: Sus scrofa domesticus

text: Swine mucosa-associated gut microbiota

characteristic: project name

text: Sus scrofa domesticus

text: Illumina MiSeq paired-end 250bp

characteristic: sequencing method

text: Caecal mucosal scraping


text: UNIVERSITY OF LIVERPOOL

text: public

characteristic: Submitter Id

characteristic: collection date

text: domestic pig

characteristic: common name

text: Pig gastrointestinal tract

characteristic: environment (biome)

text: Proximal colon

characteristic: environment (feature)

text: mucosal scraping

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Leahurst Campus, Neston

characteristic: geographic location (region and locality)

text: pig

characteristic: host common name

text: BD+S

text: host-associated

text: mimarks-survey

text: Sus scrofa domesticus

text: Swine mucosa-associated gut microbiota

text: Sus scrofa domesticus

text: Illumina MiSeq paired-end 250bp

text: Proximal colon mucosal scraping

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF LIVERPOOL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: domestic pig

text: Pig gastrointestinal tract

text: Distal colon

text: mucosal scraping

text: United Kingdom

text: Leahurst Campus, Neston

text: pig

text: BD+S

characteristic: host diet

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: Sus scrofa domesticus

characteristic: organism

text: Swine mucosa-associated gut microbiota

text: Sus scrofa domesticus

text: Illumina MiSeq paired-end 250bp

text: Distal colon mucosal scraping


text: UNIVERSITY OF LIVERPOOL

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: domestic pig

characteristic: common name

text: Pig gastrointestinal tract

characteristic: environment (biome)

text: Duodenum

characteristic: environment (feature)

text: mucosal scraping

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Leahurst Campus, Neston

text: pig

text: BD

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: Sus scrofa domesticus

text: Swine mucosa-associated gut microbiota

characteristic: project name

text: Sus scrofa domesticus

text: Illumina MiSeq paired-end 250bp

characteristic: sequencing method

text: Duodenum mucosal scraping


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF LIVERPOOL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: domestic pig

text: Pig gastrointestinal tract

text: Jejunum

text: mucosal scraping

text: United Kingdom

characteristic: geographic location (longitude)

text: Leahurst Campus, Neston

characteristic: geographic location (region and locality)

text: pig

characteristic: host common name

text: BD

text: host-associated

text: mimarks-survey

text: Sus scrofa domesticus

text: Swine mucosa-associated gut microbiota

text: Sus scrofa domesticus

text: Illumina MiSeq paired-end 250bp

text: Jejunum mucosal scraping

characteristic: title


text: UNIVERSITY OF LIVERPOOL

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: domestic pig

characteristic: common name

text: Pig gastrointestinal tract

characteristic: environment (biome)

text: Ileum

characteristic: environment (feature)

text: mucosal scraping

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Leahurst Campus, Neston

text: pig

text: BD

characteristic: host diet

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: Sus scrofa domesticus

characteristic: organism

text: Swine mucosa-associated gut microbiota

text: Sus scrofa domesticus

text: Illumina MiSeq paired-end 250bp

text: Ileum mucosal scraping


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF LIVERPOOL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: domestic pig

text: Pig gastrointestinal tract

text: Duodenum

text: mucosal scraping

text: United Kingdom

characteristic: geographic location (latitude)

text: Leahurst Campus, Neston

text: pig

text: BD+S

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: Sus scrofa domesticus

text: Swine mucosa-associated gut microbiota

characteristic: project name

text: Sus scrofa domesticus

text: Illumina MiSeq paired-end 250bp

characteristic: sequencing method

text: Duodenum mucosal scraping


text: UNIVERSITY OF LIVERPOOL

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: domestic pig

characteristic: common name

text: Pig gastrointestinal tract

characteristic: environment (biome)

text: Jejunum

characteristic: environment (feature)

text: mucosal scraping

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (longitude)

text: Leahurst Campus, Neston

characteristic: geographic location (region and locality)

text: pig

characteristic: host common name

text: BD+S

text: host-associated

text: mimarks-survey

text: Sus scrofa domesticus

text: Swine mucosa-associated gut microbiota

text: Sus scrofa domesticus

text: Illumina MiSeq paired-end 250bp

text: Jejunum mucosal scraping

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF LIVERPOOL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: domestic pig

text: Pig gastrointestinal tract

text: Ileum

text: mucosal scraping

text: United Kingdom

text: Leahurst Campus, Neston

text: pig

text: BD+S

characteristic: host diet

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: Sus scrofa domesticus

characteristic: organism

text: Swine mucosa-associated gut microbiota

text: Sus scrofa domesticus

text: Illumina MiSeq paired-end 250bp

text: Ileum mucosal scraping


text: UNIVERSITY OF LIVERPOOL

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: domestic pig

characteristic: common name

text: Pig gastrointestinal tract

characteristic: environment (biome)

text: Caecum

characteristic: environment (feature)

text: contents

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Leahurst Campus, Neston

text: pig

text: BD

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: Sus scrofa domesticus

text: Swine mucosa-associated gut microbiota

characteristic: project name

text: Sus scrofa domesticus

text: Illumina MiSeq paired-end 250bp

characteristic: sequencing method

text: Caecal contents


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF LIVERPOOL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: domestic pig

text: Pig gastrointestinal tract

text: Caecum

text: contents

text: United Kingdom

characteristic: geographic location (longitude)

text: Leahurst Campus, Neston

characteristic: geographic location (region and locality)

text: pig

characteristic: host common name

text: BD+S

text: host-associated

text: mimarks-survey

text: Sus scrofa domesticus

text: Swine mucosa-associated gut microbiota

text: Sus scrofa domesticus

text: Illumina MiSeq paired-end 250bp

text: Caecal contents

characteristic: title


text: UNIVERSITY OF LIVERPOOL

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: domestic pig

characteristic: common name

text: Pig gastrointestinal tract

characteristic: environment (biome)

text: Caecum

characteristic: environment (feature)

text: mucosal scraping

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Leahurst Campus, Neston

text: pig

text: BD

characteristic: host diet

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: Sus scrofa domesticus

characteristic: organism

text: Swine mucosa-associated gut microbiota

text: Sus scrofa domesticus

text: Illumina MiSeq paired-end 250bp

text: Caecum mucosal scraping


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF LIVERPOOL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: domestic pig

text: Pig gastrointestinal tract

text: Caecum

text: mucosal scraping

text: United Kingdom

characteristic: geographic location (latitude)

text: Leahurst Campus, Neston

text: pig

text: BD+S

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: Sus scrofa domesticus

text: Swine mucosa-associated gut microbiota

characteristic: project name

text: Sus scrofa domesticus

text: Illumina MiSeq paired-end 250bp

characteristic: sequencing method

text: Caecum mucosal scraping


text: UNIVERSITY OF LIVERPOOL

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: domestic pig

characteristic: common name

text: Pig gastrointestinal tract

characteristic: environment (biome)

text: Caecum

characteristic: environment (feature)

text: contents

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (longitude)

text: Leahurst Campus, Neston

characteristic: geographic location (region and locality)

text: pig

characteristic: host common name

text: BD

text: host-associated

text: mimarks-survey

text: Sus scrofa domesticus

text: Swine mucosa-associated gut microbiota

text: Sus scrofa domesticus

text: Illumina MiSeq paired-end 250bp

text: Caecum contents

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF LIVERPOOL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: domestic pig

text: Pig gastrointestinal tract

text: Caecum

text: contents

text: United Kingdom

text: Leahurst Campus, Neston

text: pig

text: BD+S

characteristic: host diet

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: Sus scrofa domesticus

characteristic: organism

text: Swine mucosa-associated gut microbiota

text: Sus scrofa domesticus

text: Illumina MiSeq paired-end 250bp

text: Caecum contents


text: UNIVERSITY OF LIVERPOOL

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: domestic pig

characteristic: common name

text: Pig gastrointestinal tract

characteristic: environment (biome)

text: Proximal colon

characteristic: environment (feature)

text: mucosal scraping

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Leahurst Campus, Neston

text: pig

text: BD

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: Sus scrofa domesticus

text: Swine mucosa-associated gut microbiota

characteristic: project name

text: Sus scrofa domesticus

text: Illumina MiSeq paired-end 250bp

characteristic: sequencing method

text: Proximal colon mucosal scraping


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF LIVERPOOL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: domestic pig

text: Pig gastrointestinal tract

text: Distal colon

text: mucosal scraping

text: United Kingdom

characteristic: geographic location (longitude)

text: Leahurst Campus, Neston

characteristic: geographic location (region and locality)

text: pig

characteristic: host common name

text: BD

text: host-associated

text: mimarks-survey

text: Sus scrofa domesticus

text: Swine mucosa-associated gut microbiota

text: Sus scrofa domesticus

text: Illumina MiSeq paired-end 250bp

text: Distal colon mucosal scraping

characteristic: title


text: UNIVERSITY OF LIVERPOOL

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: domestic pig

characteristic: common name

text: Pig gastrointestinal tract

characteristic: environment (biome)

text: mucosal scraping

characteristic: environment (feature)

text: mucosal scraping

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Leahurst Campus, Neston

text: pig

text: BD

characteristic: host diet

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: Sus scrofa domesticus

characteristic: organism

text: Swine mucosa-associated gut microbiota

text: Sus scrofa domesticus

text: Illumina MiSeq paired-end 250bp

text: Jejunum mucosal scraping


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF LIVERPOOL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: domestic pig

text: Pig gastrointestinal tract

text: Caecum

text: contents

text: United Kingdom

characteristic: geographic location (latitude)

text: Leahurst Campus, Neston

text: pig

text: BD+S

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: Sus scrofa domesticus

text: Swine mucosa-associated gut microbiota

characteristic: project name

text: Sus scrofa domesticus

text: Illumina MiSeq paired-end

characteristic: sequencing method

text: Caecum contents


text: P. falciparum

characteristic: ArrayExpress-Species

text: SC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: malaria parasite P. falciparum

characteristic: common name

text: Plasmodium falciparum

text: Plasmodium falciparum

characteristic: title


text: Malaria

characteristic: ENA-CHECKLIST

text: SC

text: public

text: malaria parasite P. falciparum

text: Plasmodium falciparum

characteristic: organism

text: Plasmodium falciparum


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: ROSLIN

text: public

characteristic: collection date

text: Staphylococcus aureus

characteristic: description

text: USA

characteristic: geographic location (country and/or sea)

text: Human

characteristic: host scientific name

characteristic: isolate

text: Host

characteristic: isolation source

text: Staphylococcus aureus

text: Staphylococcus aureus

characteristic: serovar

characteristic: strain


characteristic: External Id

text: ROSLIN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Staphylococcus aureus

text: Dominican Republic

text: Human

text: Host

text: Staphylococcus aureus

text: Staphylococcus aureus


characteristic: ENA-CHECKLIST

text: ROSLIN

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Staphylococcus aureus

characteristic: common name

text: Martinique

text: Human

text: Host

text: Staphylococcus aureus

text: Staphylococcus aureus

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: ROSLIN

text: public

characteristic: collection date

text: Staphylococcus aureus

text: 6-1 CC JAN 2013

characteristic: description

text: USA

text: Human

text: Host

text: Staphylococcus aureus

characteristic: organism

text: Staphylococcus aureus


text: ROSLIN

text: public

text: Staphylococcus aureus

text: 12-1 F JULY 2012

text: USA

characteristic: geographic location (country and/or sea)

text: Human

characteristic: host scientific name

characteristic: isolate

text: Host

characteristic: isolation source

text: Staphylococcus aureus

text: Staphylococcus aureus

characteristic: serovar


characteristic: External Id

text: ROSLIN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Staphylococcus aureus

text: 12-1 F MAR 2013

text: USA

text: Human

text: Host

text: Staphylococcus aureus

text: Staphylococcus aureus

characteristic: strain


characteristic: ENA-CHECKLIST

text: ROSLIN

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Staphylococcus aureus

characteristic: common name

text: 23-1 CC JULY 2012

text: USA

text: Human

text: Host

text: Staphylococcus aureus

text: Staphylococcus aureus


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: ROSLIN

text: public

characteristic: collection date

text: Staphylococcus aureus

text: 31-1 F OCT 2012

characteristic: description

text: USA

text: Human

text: Host

text: Staphylococcus aureus

text: Staphylococcus aureus

characteristic: title


text: ROSLIN

text: public

text: Staphylococcus aureus

text: 35-1 CC AUG 2012

text: USA

characteristic: geographic location (country and/or sea)

text: Human

characteristic: host scientific name

characteristic: isolate

text: Host

characteristic: isolation source

text: Staphylococcus aureus

characteristic: organism

text: Staphylococcus aureus


characteristic: External Id

text: ROSLIN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Staphylococcus aureus

text: 41-1 CC JUL 2012

text: USA

text: Human

text: Host

text: Staphylococcus aureus

text: Staphylococcus aureus

characteristic: serovar


characteristic: ENA-CHECKLIST

text: ROSLIN

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Staphylococcus aureus

text: 53-1 CC AUG 2012

text: USA

text: Human

text: Host

text: Staphylococcus aureus

text: Staphylococcus aureus

characteristic: strain


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: ROSLIN

text: public

characteristic: collection date

text: Staphylococcus aureus

characteristic: common name

text: Pig 2-1

characteristic: description

text: USA

text: Pig

text: Host

text: Staphylococcus aureus

text: Staphylococcus aureus


text: ROSLIN

text: public

text: Staphylococcus aureus

text: Pig 9-2

text: USA

characteristic: geographic location (country and/or sea)

text: Pig

characteristic: host scientific name

characteristic: isolate

text: Host

characteristic: isolation source

text: Staphylococcus aureus

text: Staphylococcus aureus

characteristic: title


characteristic: External Id

text: ROSLIN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Staphylococcus aureus

text: Pig 12-1

text: USA

text: Pig

text: Host

text: Staphylococcus aureus

characteristic: organism

text: Staphylococcus aureus


characteristic: ENA-CHECKLIST

text: ROSLIN

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Staphylococcus aureus

text: Pig 25-1

text: USA

text: Pig

text: Host

text: Staphylococcus aureus

text: Staphylococcus aureus

characteristic: serovar


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: ROSLIN

text: public

characteristic: collection date

text: Staphylococcus aureus

characteristic: common name

text: Pig N4-1

text: USA

text: Pig

text: Host

text: Staphylococcus aureus

text: Staphylococcus aureus

characteristic: strain


text: ROSLIN

text: public

text: Staphylococcus aureus

text: Pig SN5-1

characteristic: description

text: USA

characteristic: geographic location (country and/or sea)

text: Pig

characteristic: host scientific name

characteristic: isolate

text: Host

characteristic: isolation source

text: Staphylococcus aureus

text: Staphylococcus aureus


characteristic: External Id

text: CHUV-UNIL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Isolated from a patient with pneumonia, complicated by empyema

text: Switzerland

text: diseased

characteristic: host health state

text: Human

text: Blood culture

text: Streptococcus pyogenes

text: Streptococcus pyogenes

text: Blood culture

characteristic: title


characteristic: ENA-CHECKLIST

text: CHUV-UNIL

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Isolated from a patient with pneumonia, complicated by pleural effusion

text: Switzerland

text: diseased

text: Human

text: Blood culture

text: Streptococcus pyogenes

characteristic: organism

text: Streptococcus pyogenes

text: Pleural fluid


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CHUV-UNIL

text: public

characteristic: collection date

text: Isolated from a patient with pneumonia complicated by pleural effusion and toxic shock syndrome

text: Switzerland

text: diseased

text: Human

text: Blood culture

text: Streptococcus pyogenes

text: Streptococcus pyogenes

characteristic: strain

text: Blood culture


text: CHUV-UNIL

text: public

text: Isolated from a patient with oto-mastoiditis complicated by a meningitidis and a toxic shock syndrome

characteristic: description

text: Switzerland

characteristic: geographic location (country and/or sea)

text: diseased

text: Human

characteristic: host scientific name

characteristic: isolate

text: Blood culture

text: Streptococcus pyogenes

text: Streptococcus pyogenes

text: Pharyngeal swab


characteristic: External Id

text: CHUV-UNIL

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Pneumonia complicated by ARDS

text: Switzerland

text: diseased

text: Human

text: Blood culture

characteristic: isolation source

text: Streptococcus pyogenes

text: Streptococcus pyogenes

text: Blood culture


characteristic: ENA-CHECKLIST

text: CHUV-UNIL

characteristic: INSDC last update

text: public

text: Switzerland

text: diseased

characteristic: host health state

text: Human

text: Blood culture

text: Streptococcus pyogenes

text: Streptococcus pyogenes

text: Post-mortem, pleural fluid

characteristic: title


text: CHUV-UNIL

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Isolated from a patient with skin and soft tissues infection (cellulitis)

text: Switzerland

text: diseased

text: Human

text: Blood culture

text: Streptococcus pyogenes

characteristic: organism

text: Streptococcus pyogenes

text: Blood culture


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CHUV-UNIL

text: public

characteristic: collection date

text: Isolated from a patient with skin and soft tissues infection (cellulitis) complicated by deep venous thrombosis and acute renal insufficiency

text: Switzerland

text: diseased

text: Human

text: Blood culture

text: Streptococcus pyogenes

text: Streptococcus pyogenes

text: ISR

characteristic: strain

text: Blood culture


text: CHUV-UNIL

text: public

text: Isolated from a patient with septic arthritis

characteristic: description

text: Switzerland

characteristic: geographic location (country and/or sea)

text: diseased

text: Human

characteristic: host scientific name

characteristic: isolate

text: Blood culture

text: Streptococcus pyogenes

text: Streptococcus pyogenes

text: Blood culture


characteristic: External Id

text: CHUV-UNIL

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Isolated from a patient with skin and soft tissues infection complicated by toxic shock syndrome

text: Switzerland

text: diseased

text: Human

text: Blood culture

characteristic: isolation source

text: Streptococcus pyogenes

text: Streptococcus pyogenes

text: Blood culture


characteristic: ENA-CHECKLIST

text: CHUV-UNIL

characteristic: INSDC last update

text: public

text: Isolated from a patient with pneumonia complicated by pleural effusion

text: Switzerland

text: diseased

characteristic: host health state

text: Human

text: Blood culture

text: Streptococcus pyogenes

text: Streptococcus pyogenes

text: Blood culture

characteristic: title


text: UNIMIB

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Baltoro Glacier (Concordia)

characteristic: geographic location (region and locality)

text: metagenome

characteristic: organism

text: metagenome

text: Cryoconite from Baltoro glacier


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Agroscope

text: public

text: Spring/Summer 2014

characteristic: collection date

text: honey bee

characteristic: common name

text: pupae or larvae

characteristic: dev stage

text: Switzerland

text: Apis mellifera

text: Buckfast

characteristic: origin

text: Apis mellifera

text: male

characteristic: sex

text: genomic DNA of drone larvae/pupae


characteristic: External Id

text: Agroscope

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Spring/Summer 2014

text: honey bee

text: pupae or larvae

text: Switzerland

characteristic: geographic location (country and/or sea)

text: Apis mellifera

text: SwissCarnica

text: Apis mellifera

text: male

text: genomic DNA of drone larvae/pupae


characteristic: ENA-CHECKLIST

text: Agroscope

characteristic: INSDC last update

text: public

text: Spring/Summer 2014

text: honey bee

text: pupae or larvae

text: Switzerland

text: Apis mellifera

text: MelliferaConservatoryDiemtigtal

text: Apis mellifera

text: male

text: genomic DNA of drone larvae/pupae

characteristic: title


text: Agroscope

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Spring/Summer 2014

text: honey bee

text: pupae or larvae

text: Switzerland

text: Apis mellifera

text: MelliferaConservatoryGlarus

text: Apis mellifera

text: male

text: genomic DNA of drone larvae/pupae


characteristic: ENA-FIRST-PUBLIC

text: Agroscope

text: public

text: Spring/Summer 2014

text: honey bee

text: pupae or larvae

text: Switzerland

text: Apis mellifera

characteristic: organism

text: MelliferaConservatoryMelchtal

text: Apis mellifera

text: male

text: genomic DNA of drone larvae/pupae


characteristic: ENA-LAST-UPDATE

text: Agroscope

text: public

text: Spring/Summer 2014

characteristic: collection date

text: honey bee

text: pupae or larvae

text: Switzerland

text: Apis mellifera

text: MelliferaConservatoryValMustair

text: Apis mellifera

text: male

text: genomic DNA of drone larvae/pupae


text: Agroscope

text: public

text: Spring/Summer 2014

text: honey bee

characteristic: common name

text: pupae or larvae

characteristic: dev stage

text: Switzerland

text: Apis mellifera

text: MelliferaOutsideConservatories

text: Apis mellifera

text: male

text: genomic DNA of drone larvae/pupae


text: Agroscope

text: public

text: Spring/Summer 2014

text: honey bee

text: pupae or larvae

text: Switzerland

text: Apis mellifera

text: Ticino

characteristic: origin

text: Apis mellifera

text: male

characteristic: sex

text: genomic DNA of drone larvae/pupae


characteristic: External Id

text: URMITE

characteristic: INSDC center name

text: public

text: Bacillus sp. ES3

text: Bacillus sp. ES3

characteristic: strain

text: Bacillus salisiense genome


characteristic: ENA-CHECKLIST

text: URMITE

characteristic: INSDC first public

text: public

text: Peptoniphilus sp. EL1

text: Peptoniphilus sp. EL1

text: Peptoniphilus lacydonensis genome


text: URMITE

characteristic: INSDC last update

text: public

text: Prevotellaceae bacterium Marseille-P2831

text: Prevotellamassilia timonensis genome

characteristic: title


text: mixed

characteristic: ArrayExpress-Sex

text: Haemonchus contortus

characteristic: ArrayExpress-Species

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

text: barber pole worm

text: Haemonchus contortus

text: L3 pre treatment control

characteristic: sample description

text: Haemonchus contortus

text: Haemonchus contortus


text: mixed

text: Haemonchus contortus

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

text: public

characteristic: Submitter Id

text: barber pole worm

characteristic: common name

text: Haemonchus contortus

characteristic: organism

text: L3 post treatment control (no treatment)

text: Haemonchus contortus

text: Haemonchus contortus


text: mixed

text: Haemonchus contortus

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: barber pole worm

text: Haemonchus contortus

text: L3 pre BZM

text: Haemonchus contortus

text: Haemonchus contortus


text: mixed

text: Haemonchus contortus

characteristic: ENA-CHECKLIST

text: SC

text: public

text: barber pole worm

text: Haemonchus contortus

text: L3 post BZM

text: Haemonchus contortus

characteristic: strain

text: Haemonchus contortus


text: mixed

text: Haemonchus contortus

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: barber pole worm

text: Haemonchus contortus

text: L3 pre IVM

text: Haemonchus contortus

text: Haemonchus contortus


text: mixed

characteristic: ArrayExpress-Sex

text: Haemonchus contortus

text: SC

text: public

text: barber pole worm

text: Haemonchus contortus

text: L3 post IVM

text: Haemonchus contortus

text: Haemonchus contortus

characteristic: title


text: mixed

text: Haemonchus contortus

characteristic: ArrayExpress-Species

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: barber pole worm

text: Haemonchus contortus

text: L3 pre LEV

text: Haemonchus contortus

text: Haemonchus contortus


text: mixed

text: Haemonchus contortus

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

text: barber pole worm

text: Haemonchus contortus

text: L3 post LEV

text: Haemonchus contortus

text: Haemonchus contortus


characteristic: ENA-FIRST-PUBLIC

text: URMITE

text: public

text: Varibaculum sp. Marseille-P2802

text: Varibaculum sp. Marseille-P2802

text: Varibaculum massiliense genome


characteristic: ENA-LAST-UPDATE

text: URMITE

text: public

text: Acidaminococcus sp. Marseille-P2764

text: Acidaminococcus sp. Marseille-P2764

text: Acidaminococcus timonensis genome


text: public

characteristic: Submitter Id

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa clinical strains isolated from blood culture and their correspondent carbapenem-resistant derivative strains


text: URMITE

text: public

text: Romboutsia sp. DR1

text: Romboutsia sp. DR1

text: Romboutsia timonensis, a new species isolated from human gut


text: Listeria monocytogenes

text: SC

text: public

text: Listeria monocytogenes

characteristic: common name

text: Listeria monocytogenes

text: Bacterial culture

characteristic: sample description

text: Listeria monocytogenes


Clostridium ultunense strain Esp 1

characteristic: External Id

text: SLU

text: public

text: Clostridium ultunense strain Esp 1

text: A syntrophic acetate-oxidizing bacterium, strain ESP was isolated from a previously described mesophilic triculture that was able to syntrophically oxidize acetate and form methane in stoichiometric amounts. Strain EST was isolated with substrates typically utilized by homoacetogenic bacteria. Strain ESP was a spore-forming, gram-positive, rod-shaped organism which utilized formate, glucose, ethylene glycol, cysteine, betaine, and pyruvate. Acetate and sometimes formate were the main fermentation products. Small amounts of alanine were also produced from glucose, betaine, and cysteine. Strain ESP grew optimally at 37 degrees C and pH 7. The G+C content of the DNA of strain BST was 32 mol%. A 16S rRNA sequence analysis revealed that strain ESP was a member of a new species of the genus Clostridium.

characteristic: description

text: [Clostridium] ultunense Esp

characteristic: organism

text: [Clostridium] ultunense Esp

text: Draft Genome Sequence of syntrophic acetate oxidizing bacteria


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

text: public

tag: Namespace:UNIVERSITY OF BRITISH COLUMBIA

characteristic: collection date

text: Composite sample of three to five independent samples

characteristic: composite design/sieving (if any)

text: Forest

characteristic: current land use

characteristic: depth

text: Fensom sample, mineral layer, OM0C0 treatment, replicate 1

text: Forest

characteristic: environment (biome)

text: forest soil

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: A horizon

characteristic: horizon

text: metagenome

characteristic: investigation type

text: soil metagenome

characteristic: ph

text: Calcium chloride

characteristic: ph method

text: Metagenomic and metatranscriptomic analysis of forest soil communities across North America

characteristic: project name

unit: g

characteristic: sample volume or weight for DNA extraction

characteristic: sample weight for DNA extraction

text: soil metagenome

text: Illumina

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: Orthic Dystric Brunisol

characteristic: soil taxonomic/local classification

text: Stored with ice at sampling, frozen at -20 the same day, thawed, sieved and then frozen at -80 C before DNA extraction

characteristic: storage conditions (fresh/frozen/other)

characteristic: total carbon

text: combustion elemental analyzer g/Kg

characteristic: total nitrogen method

text: combustion elemental analyzer g/Kg

characteristic: total organic C method

characteristic: total soil nitrogen

unit: g/g

characteristic: water content

text: Gravimetric determination using a oven at 75 C overnight

characteristic: water content method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: composite design/sieving (if any)

text: Forest

characteristic: current land use

characteristic: depth

text: Fensom sample, mineral layer, OM0C0 treatment, replicate 2

characteristic: description

text: Forest

characteristic: environment (biome)

text: forest soil

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: A horizon

characteristic: horizon

text: metagenome

text: soil metagenome

characteristic: organism

text: Calcium chloride

text: soil metagenome

text: Illumina

text: soil

text: Orthic Dystric Brunisol

characteristic: title

text: combustion elemental analyzer g/Kg

text: combustion elemental analyzer g/Kg


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Forest

text: Fensom sample, mineral layer, OM0C0 treatment, replicate 3

text: Forest

text: forest soil

text: soil

text: Canada

text: A horizon

text: metagenome

characteristic: investigation type

text: soil metagenome

characteristic: ph

text: Calcium chloride

characteristic: ph method

characteristic: project name

characteristic: sample volume or weight for DNA extraction

characteristic: sample weight for DNA extraction

text: soil metagenome

text: Illumina

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: Orthic Dystric Brunisol

characteristic: soil taxonomic/local classification

characteristic: storage conditions (fresh/frozen/other)

characteristic: total carbon

text: combustion elemental analyzer g/Kg

characteristic: total nitrogen method

text: combustion elemental analyzer g/Kg

characteristic: total organic C method

characteristic: total soil nitrogen

characteristic: water content

characteristic: water content method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: composite design/sieving (if any)

text: Forest

characteristic: current land use

characteristic: depth

text: Fensom sample, organic layer, OM0C0 treatment, replicate 1

characteristic: description

text: Forest

characteristic: environment (biome)

text: forest soil

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: soil metagenome

characteristic: organism

text: Calcium chloride

text: soil metagenome

text: Illumina

text: soil

text: Orthic Dystric Brunisol

characteristic: title

text: combustion elemental analyzer g/Kg

text: combustion elemental analyzer g/Kg


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Forest

text: Fensom sample, organic layer, OM0C0 treatment, replicate 2

text: Forest

text: forest soil

text: soil

text: Canada

text: metagenome

characteristic: investigation type

text: soil metagenome

characteristic: ph

text: Calcium chloride

characteristic: ph method

characteristic: project name

characteristic: sample volume or weight for DNA extraction

characteristic: sample weight for DNA extraction

text: soil metagenome

text: Illumina

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: Orthic Dystric Brunisol

characteristic: soil taxonomic/local classification

characteristic: storage conditions (fresh/frozen/other)

characteristic: total carbon

text: combustion elemental analyzer g/Kg

characteristic: total nitrogen method

text: combustion elemental analyzer g/Kg

characteristic: total organic C method

characteristic: total soil nitrogen

characteristic: water content

characteristic: water content method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: composite design/sieving (if any)

text: Forest

characteristic: current land use

characteristic: depth

text: Fensom sample, organic layer, OM0C0 treatment, replicate 3

characteristic: description

text: Forest

characteristic: environment (biome)

text: forest soil

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: soil metagenome

characteristic: organism

text: Calcium chloride

text: soil metagenome

text: Illumina

text: soil

text: Orthic Dystric Brunisol

characteristic: title

text: combustion elemental analyzer g/Kg

text: combustion elemental analyzer g/Kg


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Forest

text: Fensom sample, mineral layer, OM1C0 treatment, replicate 1

text: Forest

text: forest soil

text: soil

text: Canada

text: A horizon

characteristic: horizon

text: metagenome

characteristic: investigation type

text: soil metagenome

characteristic: ph

text: Calcium chloride

characteristic: ph method

characteristic: project name

characteristic: sample volume or weight for DNA extraction

characteristic: sample weight for DNA extraction

text: soil metagenome

text: Illumina

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: Orthic Dystric Brunisol

characteristic: soil taxonomic/local classification

characteristic: storage conditions (fresh/frozen/other)

characteristic: total carbon

text: combustion elemental analyzer g/Kg

characteristic: total nitrogen method

text: combustion elemental analyzer g/Kg

characteristic: total organic C method

characteristic: total soil nitrogen

characteristic: water content

characteristic: water content method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: composite design/sieving (if any)

text: Forest

characteristic: current land use

characteristic: depth

text: Fensom sample, mineral layer, OM1C0 treatment, replicate 2

characteristic: description

text: Forest

characteristic: environment (biome)

text: forest soil

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: A horizon

characteristic: horizon

text: metagenome

text: soil metagenome

characteristic: organism

text: Calcium chloride

text: soil metagenome

text: Illumina

text: soil

text: Orthic Dystric Brunisol

characteristic: title

text: combustion elemental analyzer g/Kg

text: combustion elemental analyzer g/Kg


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Forest

text: Fensom sample, mineral layer, OM1C0 treatment, replicate 3

text: Forest

text: forest soil

text: soil

text: Canada

text: A horizon

text: metagenome

characteristic: investigation type

text: soil metagenome

characteristic: ph

text: Calcium chloride

characteristic: ph method

characteristic: project name

characteristic: sample volume or weight for DNA extraction

characteristic: sample weight for DNA extraction

text: soil metagenome

text: Illumina

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: Orthic Dystric Brunisol

characteristic: soil taxonomic/local classification

characteristic: storage conditions (fresh/frozen/other)

characteristic: total carbon

text: combustion elemental analyzer g/Kg

characteristic: total nitrogen method

text: combustion elemental analyzer g/Kg

characteristic: total organic C method

characteristic: total soil nitrogen

characteristic: water content

characteristic: water content method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: composite design/sieving (if any)

text: Forest

characteristic: current land use

characteristic: depth

text: Fensom sample, organic layer, OM1C0 treatment, replicate 1

characteristic: description

text: Forest

characteristic: environment (biome)

text: forest soil

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: soil metagenome

characteristic: organism

text: Calcium chloride

text: soil metagenome

text: Illumina

text: soil

text: Orthic Dystric Brunisol

characteristic: title

text: combustion elemental analyzer g/Kg

text: combustion elemental analyzer g/Kg


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Forest

text: Fensom sample, organic layer, OM1C0 treatment, replicate 2

text: Forest

text: forest soil

text: soil

text: Canada

text: metagenome

characteristic: investigation type

text: soil metagenome

characteristic: ph

text: Calcium chloride

characteristic: ph method

characteristic: project name

characteristic: sample volume or weight for DNA extraction

characteristic: sample weight for DNA extraction

text: soil metagenome

text: Illumina

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: Orthic Dystric Brunisol

characteristic: soil taxonomic/local classification

characteristic: storage conditions (fresh/frozen/other)

characteristic: total carbon

text: combustion elemental analyzer g/Kg

characteristic: total nitrogen method

text: combustion elemental analyzer g/Kg

characteristic: total organic C method

characteristic: total soil nitrogen

characteristic: water content

characteristic: water content method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: composite design/sieving (if any)

text: Forest

characteristic: current land use

characteristic: depth

text: Fensom sample, organic layer, OM1C0 treatment, replicate 3

characteristic: description

text: Forest

characteristic: environment (biome)

text: forest soil

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: soil metagenome

characteristic: organism

text: Calcium chloride

text: soil metagenome

text: Illumina

text: soil

text: Orthic Dystric Brunisol

characteristic: title

text: combustion elemental analyzer g/Kg

text: combustion elemental analyzer g/Kg