characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ICL-CFB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Sample SP-1-317, NAFLD activity score 2

text: human-associated habitat

text: intestine environment

text: feces

text: Spain

text: fatty liver disease

characteristic: host disease status

text: male

text: human-gut

text: metagenome

text: Non-alcoholic fatty liver disease

text: human gut metagenome

characteristic: organism

text: FLORINASH

text: human gut metagenome

text: Illumina

characteristic: title


status: PUBLIC

tag: attribute

text: ICL-CFB

text: public

characteristic: collection date

text: Sample SP-1-330, NAFLD activity score 0

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: intestine environment

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Spain

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

unit: year

characteristic: host age

characteristic: host body mass index

text: fatty liver disease

text: female

characteristic: host sex

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: Non-alcoholic fatty liver disease

characteristic: liver disorder

text: human gut metagenome

text: FLORINASH

characteristic: project name

text: human gut metagenome

text: Illumina

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ICL-CFB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Sample SP-1-339, NAFLD activity score 0

text: human-associated habitat

text: intestine environment

text: feces

text: Spain

text: fatty liver disease

characteristic: host disease status

text: female

text: human-gut

text: metagenome

text: Non-alcoholic fatty liver disease

text: human gut metagenome

characteristic: organism

text: FLORINASH

text: human gut metagenome

text: Illumina

characteristic: title


text: ICL-CFB

text: public

characteristic: collection date

text: Sample SP-1-348, NAFLD activity score 2

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: intestine environment

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

characteristic: host body mass index

text: fatty liver disease

text: female

characteristic: host sex

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: Non-alcoholic fatty liver disease

text: human gut metagenome

text: FLORINASH

text: human gut metagenome

text: Illumina


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ICL-CFB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Sample SP-1-362, NAFLD activity score 1

text: human-associated habitat

text: intestine environment

text: feces

text: Spain

text: fatty liver disease

text: male

text: human-gut

text: metagenome

text: Non-alcoholic fatty liver disease

characteristic: liver disorder

text: human gut metagenome

text: FLORINASH

characteristic: project name

text: human gut metagenome

text: Illumina

characteristic: sequencing method


text: ICL-CFB

text: public

characteristic: collection date

text: Sample SP-1-370, NAFLD activity score 1

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: intestine environment

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

characteristic: host body mass index

text: fatty liver disease

characteristic: host disease status

text: female

text: human-gut

text: metagenome

text: Non-alcoholic fatty liver disease

text: human gut metagenome

characteristic: organism

text: FLORINASH

text: human gut metagenome

text: Illumina

characteristic: title


text: Staphylococcus Aureus

characteristic: ArrayExpress-Species

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Staphylococcus Aureus

characteristic: common name

text: Staphylococcus aureus

text: Staphylococcus aureus


text: public

tag: Namespace:School UCSF School of Medicine Department Neurological Surgery Address 1450 3rd Street San Francisco CA 94158 Phone 415-514-0408 Email Soeren.Mueller@ucsf.edu vCard Download vCard

text: ArrayExpress

characteristic: broker name

text: human

text: Protocols: In accordance with institutional review board regulations, clinical samples were obtained from 1-18 years old children and adolescents with ALL before treatment. Diagnostics, risk group assignment, and treatment were performed according to the AIEOP-BFM ALL 2000 protocol (Conter, et al. 2010; Flohr, et al. 2008) and subsequently according to the AIEOP-BFM ALL 2009 protocol (EudraCT Number: 2007-004270-43). The study was approved by the institutional review board of the Hannover Medical School, Hannover, Germany and the University Medical Center Schleswig-Holstein, Kiel, Germany, and informed consent was obtained from patients and/or their legal guardians in accordance with the Declaration of Helsinki. Total RNA (including small RNA) was extracted from both PAXgene blood tubes using the PAXgene blood miRNA extraction kit (Qiagen) according to the manufacturer’s protocol. The RNA concentration and quality in each sample was evaluated by the RNA HS Assay Kit using the Qubit Fluorometer (Life Technologies) and the RNA Nano Chip using the 2100 Bioanalyser (Agilent), respectively. Total RNA preparations with an RNA integrity number (RIN) number >7.5 and sufficient quantity were used for the mRNA expression analysis. Globin depletion was performed using the GLOBINclear kit (Ambion). MACE and STDGE libraries were prepared as previously described using the MACE kit by GenXPro GmbH (Germany). Briefly, polyadenylated RNA was extracted from 2 μg Globin-depleted total RNA and reverse-transcribed with biotinylated poly(dT) primers. The resulting cDNA was fragmented and biotinylated ends were captured by streptavidin beads. TrueQuant DNA adapters (GenXPro) were ligated. to the enriched ends, and subsequent to PCR amplification the libraries were sequenced on the HiSeq2000 platform (Illumina).

characteristic: description

text: acute lymphoblastic leukemia

characteristic: disease

text: P2RY8-CRLF2 fusion positive

characteristic: genotype

text: Homo sapiens

text: Homo sapiens

text: whole blood

characteristic: organism part

text: Homo sapiens

type: has member


text: School UCSF School of Medicine Department Neurological Surgery Address 1450 3rd Street San Francisco CA 94158 Phone 415-514-0408 Email Soeren.Mueller@ucsf.edu vCard Download vCard

text: public

text: ArrayExpress

text: human

text: acute lymphoblastic leukemia

text: P2RY8-CRLF2 fusion negative

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: whole blood

text: Homo sapiens

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: ArrayExpress

text: human

text: acute lymphoblastic leukemia

text: P2RY8-CRLF2 fusion positive

text: Homo sapiens

text: Homo sapiens

text: whole blood

text: Homo sapiens


text: human vaginal metagenome

characteristic: ArrayExpress-Species

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: human vaginal metagenome

text: human vaginal metagenome

text: human vaginal metagenome


text: gut metagenome

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: gut metagenome

text: gut metagenome

text: gut metagenome


text: AZ

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: cell line

text: human

text: Protocols: All animal experiments were performed to the according to the Home Office UK. HCC70 cells (1x106 cells in RPMI serum free medium mixed 50:50 with MatrigelTM) tumours were implanted in the flank of female nude mice (nu/nu:Alpk) (AstraZeneca, Alderley Park, UK) between the ages of 8 and 12 weeks. Once tumours reached ~200-500mm3 animals were randomised into control and treatment groups. Tumour volume was calculated twice weekly from bilateral caliper measurements using the formula (Length x width x width) x π/6). Dosage of treated xenografts For xenograft models, cell pellets and tissues from xenograft models were snap frozen. Total RNA was extracted using miRNeasy kit (Qiagen), with DNAse treatment, following manufacturer’s instructions. RNA quantity was assessed by Nanodrop 2000. Samples profiled for RNA-seq were assessed for RNA integrity (RIN>7) using the RNA 6000 Nano Assay on the BioAnalyser (Agilent). Sample were sent for RNA-sequencing at Liverpool Centre for Genomic Research. Total RNA was ribo-depleted, paired-end ScriptSeq library was performed and sequenced for 100bp/100M reads per sample.

text: Homo sapiens

text: Homo sapiens

text: flank

characteristic: sampling site

text: Homo sapiens

text: breast cancer cell line

characteristic: xenograft

text: mouse

characteristic: xenograft host organism

text: nu/nu:Alpk

characteristic: xenograft strain


text: UNIVERSITY OF BERN

text: public

tag: Namespace:UNIVERSITY OF BERN

text: house mouse

characteristic: common name

text: Illumina HiSeq 2500

characteristic: instrument model

text: TruSeq Stranded mRNA

characteristic: library construction protocol

text: Oligo-dT

characteristic: library selection

text: TRANSCRIPTOMIC

characteristic: library source

text: RNA-Seq

characteristic: library strategy

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Triaka ESRP1 mutant mouse (Esrp1<m1Btlr> or Esrp1<Triaka;Triaka>)

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BERN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: house mouse

text: Illumina HiSeq 2500

text: TruSeq Stranded mRNA

text: Oligo-dT

text: TRANSCRIPTOMIC

text: RNA-Seq

text: Mus musculus

text: Mus musculus

text: wildtype (C57BL/6J )


text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Division of Biology, Faculty of Science, University of Zagreb, Croatia

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: 1 cell embryo

characteristic: cell type

text: house mouse

text: Protocols: Metaphase II-arrested eggs (MII eggs) were obtained from superovulated 3-week-old C57BL6/J and B6D2F1 female mice (SLC Japan, Shizuoka) that were first injected intraperitoneally with 5 IU of equine chorionic gonadotropin (eCG; ASKA Pharmaceutical Co., Tokyo) followed 48 h later with 5 IU of human chorionic gonadotropin (hCG; ASKA Pharmaceutical). MII eggs were collected from the ampullae of oviducts 15 h post-hCG injection and transferred to human tubal fluid medium (Lawitts & Biggers, 1993) supplemented with 10 mg/ml BSA (Sigma-Aldrich, Saint Louis, MO). The eggs derived from C57BL6/J and B6D2F1 mice were inseminated with spermatozoa obtained from the caudal epididymis of adult C57BL6/J and ICR mice (SLC Japan), respectively. The spermatozoa were incubated for 2 h in TYH medium (Toyoda Y, 1971) and human tubal fluid medium supplemented with 10 mg/ml BSA for the eggs from C57BL6/J and B6D2F1 female mice, respectively, in an atmosphere of 5% CO2/95% air at 38°C prior to use for insemination. Four to six hours after insemination, the eggs were washed and cultured in potassium simplex optimized medium (Quinn & Begley, 1984). PolyA RNA was isolated by using mRNA purification kit (Invitrogen, Carlsbad, CA; cat# 610.06) RNA quality analysis and size-selection (>200 tn) were performed on the Bioanalyzer RNA Pico Chip (Agilent Technologies, Santa Clara, CA). RNA-Seq libraries were constructed using the mRNA-Seq Sample Preparation Kit (Illumina, San Diego, CA)

characteristic: description

text: 1 cell embryo

characteristic: developmental stage

text: Mus musculus

text: Mus musculus

text: Mus musculus

characteristic: strain


text: Division of Biology, Faculty of Science, University of Zagreb, Croatia

text: public

text: ArrayExpress

text: oocyte

text: house mouse

characteristic: common name

text: oocyte

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Mus musculus


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

tag: Namespace:UNIVERSITY OF SOUTHERN CALIFORNIA

characteristic: collection date

text: seawater metagenome

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: Pacific Ocean

characteristic: geographic location (country and/or sea)

unit: m

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: seawater metagenome

characteristic: project name

text: seawater metagenome

text: PE Illumina Miseq 2x300

characteristic: sequencing method

characteristic: title

text: water

characteristic: water environmental package


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF SOUTHERN CALIFORNIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: unidentified

text: unidentified


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: synthetic metagenome

characteristic: organism

text: synthetic metagenome


text: public

tag: Namespace:RESEARCH CENTER FOR ECO-ENVIRONMENTAL SCIENCES, CHINESE ACADEMY OF SCIENCES

characteristic: collection date

text: not spplicable

characteristic: environment (biome)

text: not spplicable

characteristic: environment (feature)

text: not spplicable

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: metagenome

text: mobilome of thermophilic sludge

text: metagenome

text: illumina hiseq

text: sample

text: wastewater/sludge

characteristic: wastewater/sludge environmental package


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RESEARCH CENTER FOR ECO-ENVIRONMENTAL SCIENCES, CHINESE ACADEMY OF SCIENCES

text: public

text: not spplicable

text: not spplicable

text: not spplicable

text: China

text: metagenome

characteristic: investigation type

text: metagenome

text: mobilome of thermophilic sludge

characteristic: project name

text: metagenome

text: illumina hiseq

characteristic: sequencing method

text: sample

characteristic: title

text: wastewater/sludge


characteristic: ENA-CHECKLIST

text: UC BERKELEY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:UC BERKELEY

characteristic: Submitter Id

text: metagenome

text: metagenome

text: gyrB sequences from hominids


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

characteristic: collection date

text: seawater metagenome

characteristic: common name

characteristic: depth

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: water

characteristic: environmental package

text: Pacific Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: metagenome

text: seawater metagenome

characteristic: organism

text: seawater metagenome

text: PE Illumina Miseq 2x300


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: seawater metagenome

text: water

text: Pacific Ocean

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: seawater metagenome

characteristic: project name

text: seawater metagenome

text: PE Illumina Miseq 2x301

characteristic: sequencing method

characteristic: title


text: UNIVERSITY OF SOUTHERN CALIFORNIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: seawater metagenome

characteristic: common name

characteristic: depth

text: water

text: Pacific Ocean

text: metagenome

text: seawater metagenome

text: seawater metagenome

text: PE Illumina Miseq 2x302


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: seawater metagenome

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: water

characteristic: environmental package

text: Pacific Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: metagenome

text: seawater metagenome

characteristic: organism

text: seawater metagenome

text: PE Illumina Miseq 2x303


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF WESTERN AUSTRALIA

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:UNIVERSITY OF WESTERN AUSTRALIA

text: reference soils sequences

characteristic: description

text: terrestrial biome

text: semi-arid soil

text: soil

text: Australia

characteristic: geographic location (elevation)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: metagenome

text: Microbial Indicators of post-mining substrate restoration

characteristic: project name

text: metagenome

text: Ion Torrent PGM

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: Reference site

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: CEBITEC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Draft genome of Streptococcus pneumoniae 246

text: human

characteristic: environment (biome)

text: blood

characteristic: environment (feature)

text: blood

characteristic: environment (material)

text: Germany

text: human-associated

characteristic: human associated environmental package

text: mimarks-survey

characteristic: isolate

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Illumina


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: PHE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: description

characteristic: emm

text: Streptococcus pyogenes

characteristic: organism

text: Streptococcus pyogenes


text: Clostridium perfringens ATCC 13124

characteristic: ArrayExpress-Species

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC last update

text: public

text: Clostridium perfringens ATCC 13124

characteristic: common name

text: Clostridium perfringens ATCC 13124

text: Clostridium perfringens ATCC 13124

characteristic: title


text: UDS

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: public

tag: Namespace:Leibniz Institute for Freshwater Ecology and Inland Fisheries

characteristic: collection date

text: Littoral water sample, 10 m off shore

text: freshwater biome

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: freshwater metagenome

characteristic: project name

text: Niskin bottle

characteristic: sample collection device or method

text: freshwater metagenome

text: pyrosequencing

characteristic: sequencing method

text: D1, D2 on LSU rRNA

characteristic: target subfragment

text: Littoral

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Leibniz Institute for Freshwater Ecology and Inland Fisheries

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Littoral water sample, 10 m off shore

characteristic: description

text: freshwater biome

text: lake

text: water

text: Germany

text: mimarks-survey

text: freshwater metagenome

characteristic: organism

text: Niskin bottle

text: freshwater metagenome

text: pyrosequencing

text: D1, D2 on LSU rRNA

text: Littoral

characteristic: title

text: water


text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Pelagic water sample, integrated

text: freshwater biome

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: freshwater metagenome

text: Niskin bottle

text: freshwater metagenome

text: pyrosequencing

text: D1, D2 on LSU rRNA

text: Pelagic

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Water sample above the sediment

text: freshwater biome

text: lake

text: water

text: Germany

text: mimarks-survey

text: freshwater metagenome

characteristic: project name

text: Supernatant from sediment corer

characteristic: sample collection device or method

text: freshwater metagenome

text: pyrosequencing

characteristic: sequencing method

text: D1, D2 on LSU rRNA

characteristic: target subfragment

text: water

characteristic: water environmental package


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Vertical plankton tow

characteristic: description

text: freshwater biome

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: plankton

characteristic: environment (material)

text: Germany

text: mimarks-survey

text: freshwater metagenome

characteristic: organism

text: Plankton net, 55 micrometer

text: freshwater metagenome

text: pyrosequencing

text: D1, D2 on LSU rRNA

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Periphyton on reed plants, wood, and stones

text: freshwater biome

text: lake

text: biofilm

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: biofilm metagenome

text: Scraping with Scalpel

text: biofilm metagenome

text: pyrosequencing

text: D1, D2 on LSU rRNA

text: Biofilm

text: water


reed

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: reed

characteristic: Submitter Id

characteristic: collection date

text: common reed

characteristic: common name

text: submerged and emerged plant parts

characteristic: description

text: freshwater biome

text: lake

text: plant

text: Germany

text: mimarks-survey

text: Phragmites australis

characteristic: project name

text: cutting with scissors

characteristic: sample collection device or method

text: Phragmites australis

text: pyrosequencing

characteristic: sequencing method

text: Phragmites australis

characteristic: specific host

text: D1, D2 on LSU rRNA

characteristic: target subfragment

text: Reed

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: benthic material within 10 m off shore

text: freshwater biome

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: benthos

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

text: mimarks-survey

text: freshwater metagenome

characteristic: organism

text: collecting with sediment grabber, forceps

text: freshwater metagenome

text: pyrosequencing

text: D1, D2 on LSU rRNA

text: Benthos

characteristic: title

text: water


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: uppermost sediment layer, 30-60 m water depth

characteristic: description

text: freshwater biome

text: lake

text: sediment

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: freshwater sediment metagenome

characteristic: project name

text: Sediment corer

characteristic: sample collection device or method

text: freshwater sediment metagenome

text: pyrosequencing

characteristic: sequencing method

text: D1, D2 on LSU rRNA

text: Sediment

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CEBITEC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Draft genome sequence of Streptococcus pneumoniae isolate 376

text: human

characteristic: environment (biome)

text: CSF

characteristic: environment (feature)

text: CSF

characteristic: environment (material)

text: Germany

text: human-associated

characteristic: human associated environmental package

text: mimarks-survey

characteristic: isolate

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Illumina MiSeq


text: CEBITEC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Draft genome sequence of Streptococcus pneumoniae isolate 13514

characteristic: description

text: human

text: Nasopharynx

text: Nasopharynx

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: human-associated

text: mimarks-survey

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

text: Illumina MiSeq

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

tag: Namespace:Centre for Plant Biotechnology and Breeding, Biotechnical Faculty, University of Ljubljana

text: European hop

characteristic: common name

text: Celeia

characteristic: cultivar

characteristic: days post inoculation

text: Verticillium nonalfalfae

characteristic: infection

text: Humulus lupulus

text: Humulus lupulus

text: root

characteristic: tissue type

text: Hop - Verticillium colonisation


text: Centre for Plant Biotechnology and Breeding, Biotechnical Faculty, University of Ljubljana

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: European hop

text: Celeia

text: Verticillium nonalfalfae

text: Humulus lupulus

text: Humulus lupulus

text: root

text: Hop - Verticillium colonisation


text: public

text: European hop

text: celeia

text: control

text: Humulus lupulus

characteristic: organism

text: Humulus lupulus

text: root

text: Hop - Verticillium colonisation


text: public

text: European hop

text: Celeia

text: control

text: Humulus lupulus

text: Humulus lupulus

text: root

text: Hop - Verticillium colonisation

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: European hop

text: Celeia

text: Verticillium nonalfalfae

text: Humulus lupulus

text: Humulus lupulus

text: shoot

text: Hop - Verticillium colonisation


characteristic: ENA-FIRST-PUBLIC

text: public

text: European hop

text: Celeia

text: control

text: Humulus lupulus

text: Humulus lupulus

text: shoot

text: Hop - Verticillium colonisation


characteristic: ENA-LAST-UPDATE

text: public

text: European hop

text: Wye Target

text: Verticillium nonalfalfae

text: Humulus lupulus

text: Humulus lupulus

text: root

text: Hop - Verticillium colonisation


characteristic: External Id

text: public

text: European hop

text: Wye Target

text: control

text: Humulus lupulus

text: Humulus lupulus

text: root

text: Hop - Verticillium colonisation


characteristic: INSDC center name

text: public

text: European hop

text: Wye Target

text: Verticillium nonalfalfae

text: Humulus lupulus

text: Humulus lupulus

text: shoot

text: Hop - Verticillium colonisation


text: public

text: European hop

characteristic: common name

text: Wye Target

text: control

text: Humulus lupulus

text: Humulus lupulus

text: shoot

text: Hop - Verticillium colonisation


text: CEBITEC

text: public

characteristic: collection date

text: Draft genome sequence of Streptococcus pneumoniae isolate 13827

characteristic: description

text: human

characteristic: environment (biome)

text: Tracheal secretion

characteristic: environment (feature)

text: Tracheal secretion

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-associated

characteristic: human associated environmental package

text: mimarks-survey

characteristic: investigation type

characteristic: isolate

text: Streptococcus pneumoniae

characteristic: project name

text: Streptococcus pneumoniae

text: Illumina MiSeq

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CEBITEC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Draft genome sequence of Streptococcus pneumoniae isolate 762

text: human

text: Blood

text: Blood

text: Germany

text: human-associated

text: mimarks-survey

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

text: Illumina MiSeq

characteristic: title


characteristic: External Id

text: CEBITEC

characteristic: INSDC center name

text: public

characteristic: collection date

text: Draft genome sequence of Streptococcus pneumoniae isolate 893

characteristic: description

text: human

characteristic: environment (biome)

text: Blood

characteristic: environment (feature)

text: Blood

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: human-associated

text: mimarks-survey

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Illumina MiSeq


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CEBITEC

text: public

text: Draft genome of Streptococcus pneumoniae isolate 1541

text: human

text: CSF

text: CSF

text: Germany

characteristic: geographic location (longitude)

text: human-associated

characteristic: human associated environmental package

text: mimarks-survey

characteristic: investigation type

characteristic: isolate

text: Streptococcus pneumoniae

characteristic: project name

text: Streptococcus pneumoniae

text: Illumina MiSeq

characteristic: sequencing method


characteristic: External Id

text: URMITE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Culturomics study

text: Murdochiella sp. Marseille-P2341

characteristic: organism

text: Murdochiella sp. Marseille-P2341

characteristic: strain

text: Murdochiella vaginalis genome

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CEBITEC

text: public

characteristic: collection date

text: Draft genome of Streptococcus pneumoniae isolate 1720

characteristic: description

text: human

characteristic: environment (biome)

text: CSF

characteristic: environment (feature)

text: CSF

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: human-associated

text: mimarks-survey

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Illumina MiSeq


characteristic: External Id

text: CEBITEC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Draft genome of Streptococcus pneumoniae isolate 20007

text: human

text: puncture

text: puncture

text: Germany

characteristic: geographic location (longitude)

text: human-associated

characteristic: human associated environmental package

text: mimarks-survey

characteristic: investigation type

characteristic: isolate

text: Streptococcus pneumoniae

characteristic: project name

text: Streptococcus pneumoniae

text: Illumina MiSeq

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CEBITEC

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Draft genome of Streptococcus pneumoniae isolate 20253

text: human

text: Blood

text: Blood

text: Germany

text: human-associated

text: mimarks-survey

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

text: Illumina MiSeq

characteristic: title


characteristic: External Id

text: ANIMAL AND PLANT HEALTH AGENCY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:ANIMAL AND PLANT HEALTH AGENCY

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Turkey

characteristic: host

text: Staphylococcus aureus

text: Staphylococcus aureus

characteristic: spa type

text: LA-MRSA CC398


text: ANIMAL AND PLANT HEALTH AGENCY

characteristic: INSDC last update

text: public

text: United Kingdom

text: Pig

text: Staphylococcus aureus

text: Staphylococcus aureus

text: LA-MRSA CC398


text: ANIMAL AND PLANT HEALTH AGENCY

text: public

text: Belgium

text: Rat

text: Staphylococcus aureus

text: Staphylococcus aureus

text: LA-MRSA CC398


text: ANIMAL AND PLANT HEALTH AGENCY

text: public

text: Belgium

text: Cattle

text: Staphylococcus aureus

text: Staphylococcus aureus

text: LA-MRSA CC398


text: ANIMAL AND PLANT HEALTH AGENCY

text: public

text: Belgium

text: Bovine

text: Staphylococcus aureus

text: Staphylococcus aureus

text: LA-MRSA CC398


text: ANIMAL AND PLANT HEALTH AGENCY

text: public

text: Belgium

text: Pig

text: Staphylococcus aureus

text: Staphylococcus aureus

text: LA-MRSA CC398


text: ANIMAL AND PLANT HEALTH AGENCY

text: public

text: Belgium

text: Chicken

text: Staphylococcus aureus

text: Staphylococcus aureus

text: LA-MRSA CC398


text: ANIMAL AND PLANT HEALTH AGENCY

text: public

text: Belgium

text: Horse

text: Staphylococcus aureus

text: Staphylococcus aureus

text: LA-MRSA CC398


text: SMU

text: public

characteristic: common name

characteristic: description

text: body

characteristic: environment (biome)

text: animal

characteristic: environment (feature)

text: fecal

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: metagenome

text: animal

characteristic: project name

text: metagenome

text: Illumina Miseq

characteristic: sequencing method

text: animal


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CEBITEC

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Draft genome of Streptococcus pneumoniae isolate 21295

text: human

text: Blood

text: Blood

text: Germany

text: human-associated

characteristic: human associated environmental package

text: mimarks-survey

characteristic: isolate

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

text: Illumina MiSeq

characteristic: title


text: URMITE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Mycobacterium acapulcensis is a rapidly growing scotochromogenic acid-acid fast bacilli.

characteristic: description

text: Mycobacterium acapulcensis

text: Mycobacterium acapulcensis

characteristic: strain

text: Draft genome sequence of Mycobacterium acapulcensis strain CSURP1424


characteristic: ENA-CHECKLIST

text: CEBITEC

text: public

text: Draft genome of Streptococcus pneumoniae isolate 21299

text: human

characteristic: environment (biome)

text: Blood

characteristic: environment (feature)

text: Blood

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-associated

text: mimarks-survey

characteristic: investigation type

text: Streptococcus pneumoniae

characteristic: project name

text: Streptococcus pneumoniae

text: Illumina MiSeq

characteristic: sequencing method


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: URMITE

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Vaginella massiliensis was isolated from vaginal sample in the hospital of Timone

text: Weeksella sp. Marseille-P2517

text: Weeksella sp. Marseille-P2517

text: Vaginella massiliensis genome


characteristic: ENA-CHECKLIST

text: CEBITEC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: collection date

text: Draft genome of Streptococcus pneumoniae isolate 27516

characteristic: description

text: human

text: sputum

text: sputum

text: Germany

text: human-associated

characteristic: human associated environmental package

text: mimarks-survey

characteristic: isolate

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

text: Illumina MiSeq

characteristic: title


text: CEBITEC

text: public

text: Draft genome of Streptococcus pneumoniae isolate 23543

text: human

characteristic: environment (biome)

text: Blood

characteristic: environment (feature)

text: Blood

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-associated

text: mimarks-survey

characteristic: investigation type

text: Streptococcus pneumoniae

characteristic: project name

text: Streptococcus pneumoniae

text: Illumina MiSeq

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: Submitter Id

text: in vitro RNA-seq IP32953 LB exponential 25C replicate 1

text: Yersinia pseudotuberculosis IP 32953

text: Yersinia pseudotuberculosis IP 32953


text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC last update

text: public

text: in vitro RNA-seq IP32953 LB exponential 25C replicate 2

characteristic: description

text: Yersinia pseudotuberculosis IP 32953

characteristic: organism

text: Yersinia pseudotuberculosis IP 32953

characteristic: title


text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: in vitro RNA-seq IP32953 LB exponential 25C replicate 3

text: Yersinia pseudotuberculosis IP 32953

text: Yersinia pseudotuberculosis IP 32953


text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: in vitro RNA-seq IP32953 LB exponential 37C replicate 1

text: Yersinia pseudotuberculosis IP 32953

text: Yersinia pseudotuberculosis IP 32953


text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: in vitro RNA-seq IP32953 LB exponential 37C replicate 2

text: Yersinia pseudotuberculosis IP 32953

text: Yersinia pseudotuberculosis IP 32953


text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: in vitro RNA-seq IP32953 LB exponential 37C replicate 3

text: Yersinia pseudotuberculosis IP 32953

text: Yersinia pseudotuberculosis IP 32953


text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: in vitro RNA-seq IP32953 LB stationary 25C replicate 1

text: Yersinia pseudotuberculosis IP 32953

text: Yersinia pseudotuberculosis IP 32953


text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: in vitro RNA-seq IP32953 LB stationary 25C replicate 2

text: Yersinia pseudotuberculosis IP 32953

text: Yersinia pseudotuberculosis IP 32953


text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: in vitro RNA-seq IP32953 LB stationary 25C replicate 3

text: Yersinia pseudotuberculosis IP 32953

text: Yersinia pseudotuberculosis IP 32953


text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: in vitro RNA-seq IP32953 LB stationary 37C replicate 1

text: Yersinia pseudotuberculosis IP 32953

text: Yersinia pseudotuberculosis IP 32953


text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: in vitro RNA-seq IP32953 LB stationary 37C replicate 2

text: Yersinia pseudotuberculosis IP 32953

text: Yersinia pseudotuberculosis IP 32953


text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: in vitro RNA-seq IP32953 LB stationary 37C replicate 3

text: Yersinia pseudotuberculosis IP 32953

text: Yersinia pseudotuberculosis IP 32953


text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: RNA-seq IP32953 infected Peyers patches Seq run 1 replicate 1 (includes ERCC ExFold RNA SpikeIn Mix 1)

text: mixed sample

text: mixed sample


text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: RNA-seq IP32953 infected Peyers patches Seq run 1 replicate 2 (includes ERCC ExFold RNA SpikeIn Mix 2)

text: mixed sample

text: mixed sample


text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: RNA-seq IP32953 infected Peyers patches Seq run 1 replicate 3 (includes ERCC ExFold RNA SpikeIn Mix 1)

text: mixed sample

text: mixed sample


text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: RNA-seq IP32953 infected Peyers patches Seq run 2 replicate 1 (includes ERCC ExFold RNA SpikeIn Mix 1)

text: mixed sample

text: mixed sample


text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: RNA-seq IP32953 infected Peyers patches Seq run 2 replicate 2 (includes ERCC ExFold RNA SpikeIn Mix 2)

text: mixed sample

text: mixed sample


text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: RNA-seq IP32953 infected Peyers patches Seq run 2 replicate 3 (includes ERCC ExFold RNA SpikeIn Mix 1)

text: mixed sample

text: mixed sample


text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: house mouse

characteristic: common name

text: RNA-seq uninfected Peyers patches Seq run 1 replicate 1 (includes ERCC ExFold RNA SpikeIn Mix 2)

text: Mus musculus

text: Mus musculus


text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: house mouse

text: RNA-seq uninfected Peyers patches Seq run 1 replicate 2 (includes ERCC ExFold RNA SpikeIn Mix 1)

text: Mus musculus

text: Mus musculus


text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: house mouse

text: RNA-seq uninfected Peyers patches Seq run 1 replicate 3 (includes ERCC ExFold RNA SpikeIn Mix 2)

text: Mus musculus

text: Mus musculus


text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: house mouse

text: RNA-seq uninfected Peyers patches Seq run 2 replicate 1 (includes ERCC ExFold RNA SpikeIn Mix 2)

text: Mus musculus

text: Mus musculus


text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: house mouse

text: RNA-seq uninfected Peyers patches Seq run 2 replicate 2 (includes ERCC ExFold RNA SpikeIn Mix 1)

text: Mus musculus

text: Mus musculus


text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: house mouse

text: RNA-seq uninfected Peyers patches Seq run 2 replicate 3 (includes ERCC ExFold RNA SpikeIn Mix 2)

text: Mus musculus

text: Mus musculus


text: IFR

text: public

text: Delveen Ibrahim

characteristic: collected by

text: Four draft genomes of Escherichia coli isolated from cattle slurry

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Dairy Farm, East Midlands, United Kingdom

characteristic: geographic location (region and locality)

text: Solid Cattle Slurry

characteristic: isolation source

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli from Agricultural sources


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: CEBITEC

text: public

characteristic: collection date

text: Draft genome of Streptococcus pneumoniae isolate 27401

text: human

characteristic: environment (biome)

text: CSF

characteristic: environment (feature)

text: CSF

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-associated

characteristic: human associated environmental package

text: mimarks-survey

characteristic: investigation type

characteristic: isolate

text: Streptococcus pneumoniae

characteristic: project name

text: Streptococcus pneumoniae

text: Illumina MiSeq

characteristic: sequencing method


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CEBITEC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Draft genome of Streptococcus pneumoniae isolate 28838

characteristic: description

text: human

text: CSF

text: CSF

text: Germany

text: human-associated

text: mimarks-survey

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

text: Illumina MiSeq

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: PHE

text: public

text: PneumoCaT - Development Set

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae


text: PHE

text: public

text: PneumoCaT - Validation Set

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae


text: PHE

text: public

text: PneumoCaT - Validation Set; removed from final manuscript due to contamination

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae


text: PHE

text: public

text: PneumoCaT - Validation Set; not included in final manuscript due to duplication (PHESPV1906)

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae


text: PHE

text: public

text: PneumoCaT - Validation Set - removed from final manuscript due to contamination

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae


text: PHE

text: public

text: PneumoCaT - Validation Set; not included in the final manuscript due to duplication (PHESPV2067)

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae


text: CEBITEC

text: public

characteristic: collection date

text: Draft genome of Streptococcus pneumoniae isolate 36180

text: human

characteristic: environment (biome)

text: Middle ear fluid

characteristic: environment (feature)

text: Middle ear fluid

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-associated

characteristic: human associated environmental package

text: mimarks-survey

characteristic: investigation type

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Illumina MiSeq


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CEBITEC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Draft genome of Streptococcus pneumoniae isolate 37119

text: human

text: Middle ear fluid

text: Middle ear fluid

text: Germany

text: human-associated

text: mimarks-survey

characteristic: isolate

text: Streptococcus pneumoniae

characteristic: project name

text: Streptococcus pneumoniae

text: Illumina MiSeq

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: CEBITEC

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Draft genome of Streptococcus pneumoniae isolate 38301

characteristic: description

text: human

characteristic: environment (biome)

text: Nasopharynx

text: nasopharynx

text: Germany

text: human-associated

text: mimarks-survey

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

text: Illumina MiSeq

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CEBITEC

text: public

text: Draft genome of Streptococcus pneumoniae isolate 44017

text: human

text: Blood

characteristic: environment (feature)

text: Blood

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-associated

characteristic: human associated environmental package

text: mimarks-survey

characteristic: investigation type

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Illumina MiSeq


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: CEBITEC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Draft genome of Streptococcus pneumoniae isolate 40086

text: human

text: Nasopharynx

text: Nasopharynx

text: Germany

text: human-associated

text: mimarks-survey

characteristic: isolate

text: Streptococcus pneumoniae

characteristic: project name

text: Streptococcus pneumoniae

text: Illumina MiSeq

characteristic: sequencing method


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Genoscope CEA

text: public

characteristic: SRA accession

tag: Namespace:Genoscope CEA

characteristic: Submitter Id

text: Thiomonas delicata

characteristic: organism

text: Thiomonas delicata

text: DSM 16361

characteristic: strain

text: Procaryotic génome sequencing

characteristic: title


text: UNIVERSITY OF LIVERPOOL

text: public

tag: Namespace:UNIVERSITY OF LIVERPOOL

text: Pooled genomic DNA from 40 isolates

characteristic: description

text: Caenorhabditis elegans N2 wild-type

characteristic: lab host

text: Staphylococcus aureus subsp. aureus MSSA476

text: MSSA 476

text: Replicate 1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF LIVERPOOL

text: public

text: Pooled genomic DNA from 40 isolates

text: Caenorhabditis elegans N2 wild-type

text: MSSA 476

text: Replicate 2


text: UNIVERSITY OF LIVERPOOL

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Pooled genomic DNA from 40 isolates

text: Caenorhabditis elegans N2 wild-type

text: MSSA 476

text: Replicate 3


text: UNIVERSITY OF LIVERPOOL

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Pooled genomic DNA from 40 isolates

text: Caenorhabditis elegans N2 wild-type

text: MSSA 476

text: Replicate 4


text: UNIVERSITY OF LIVERPOOL

text: public

text: Pooled genomic DNA from 40 isolates

text: Caenorhabditis elegans N2 wild-type

text: MSSA 476

text: Replicate 5


text: UNIVERSITY OF LIVERPOOL

text: public

text: Pooled genomic DNA from 40 isolates

text: Caenorhabditis elegans N2 wild-type

text: Enterococcus faecalis OG1RF

text: Enterococcus faecalis OG1RF

text: Replicate 1


text: UNIVERSITY OF LIVERPOOL

text: public

text: Pooled genomic DNA from 40 isolates

text: Caenorhabditis elegans N2 wild-type

text: Enterococcus faecalis OG1RF

text: Enterococcus faecalis OG1RF

text: Replicate 2


text: UNIVERSITY OF LIVERPOOL

text: public

text: Pooled genomic DNA from 40 isolates

text: Caenorhabditis elegans N2 wild-type

text: Enterococcus faecalis OG1RF

text: Enterococcus faecalis OG1RF

text: Replicate 3


text: UNIVERSITY OF LIVERPOOL

text: public

text: Pooled genomic DNA from 40 isolates

text: Caenorhabditis elegans N2 wild-type

text: Enterococcus faecalis OG1RF

text: Enterococcus faecalis OG1RF

text: Replicate 4


text: UNIVERSITY OF LIVERPOOL

text: public

text: Pooled genomic DNA from 40 isolates

text: Caenorhabditis elegans N2 wild-type

text: Enterococcus faecalis OG1RF

text: Enterococcus faecalis OG1RF

text: Replicate 5


text: CEBITEC

text: public

characteristic: collection date

text: Draft genome of Streptococcus pneumoniae isolate 41023

text: human

characteristic: environment (biome)

text: Swab nasopharynx

characteristic: environment (feature)

text: Swab nasopharynx

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-associated

characteristic: human associated environmental package

text: mimarks-survey

characteristic: investigation type

characteristic: isolate

text: Streptococcus pneumoniae

characteristic: project name

text: Streptococcus pneumoniae

text: Illumina MiSeq


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CEBITEC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Draft genome of Streptococcus pneumoniae isolate 37666

characteristic: description

text: human

text: Nasopharynx

text: Nasopharynx

text: Germany

text: human-associated

text: mimarks-survey

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

text: Illumina MiSeq

characteristic: sequencing method

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: CEBITEC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: collection date

text: Draft genome of Streptococcus pneumoniae isolate 41617

text: human

characteristic: environment (biome)

text: CSF

characteristic: environment (feature)

text: CSF

characteristic: environment (material)

text: Germany

text: human-associated

text: mimarks-survey

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Illumina MiSeq


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: CEBITEC

text: public

text: Draft genome of Streptococcus pneumoniae isolate 41844

text: human

text: Nasopharynx

text: Nasopharynx

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-associated

characteristic: human associated environmental package

text: mimarks-survey

characteristic: investigation type

characteristic: isolate

text: Streptococcus pneumoniae

characteristic: project name

text: Streptococcus pneumoniae

text: Illumina MiSeq


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: CEBITEC

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Draft genome of Streptococcus pneumoniae isolate 42538

characteristic: description

text: human

text: wound

text: wound

text: Germany

text: human-associated

text: mimarks-survey

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

text: Illumina MiSeq

characteristic: sequencing method

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: CEBITEC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: collection date

text: Draft Genome of Streptococcus pneumoniae isolate 43003

text: human

characteristic: environment (biome)

text: Blood

characteristic: environment (feature)

text: Blood

characteristic: environment (material)

text: Germany

text: human-associated

text: mimarks-survey

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Illumina MiSeq


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: CEBITEC

text: public

text: Draft genome of Streptococcus pneumoniae isolate 43985

text: Human

text: CSF

text: CSF

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-associated

characteristic: human associated environmental package

text: mimarks-survey

characteristic: investigation type

characteristic: isolate

text: Streptococcus pneumoniae

characteristic: project name

text: Streptococcus pneumoniae

text: Illumina MiSeq


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: CEBITEC

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Draft genome of Streptococcus pneumoniae isolate 44233

characteristic: description

text: Human

text: Middle ear fluid

text: Middle ear fluid

text: Germany

text: human-associated

text: mimarks-survey

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

text: Illumina MiSeq

characteristic: sequencing method

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: CEBITEC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: collection date

text: Draft genome of Streptococcus pneumoniae isolate 46048

text: Human

characteristic: environment (biome)

text: Blood

characteristic: environment (feature)

text: Blood

characteristic: environment (material)

text: Germany

text: human-associated

text: mimarks-survey

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Illumina MiSeq


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: CEBITEC

text: public

text: Draft genome of Streptococcus pneumoniae isolate 46770

text: Human

text: Blood

text: Blood

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-associated

characteristic: human associated environmental package

text: mimarks-survey

characteristic: investigation type

characteristic: isolate

text: Streptococcus pneumoniae

characteristic: project name

text: Streptococcus pneumoniae

text: Illumina MiSeq


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: CEBITEC

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Draft genome of Streptococcus pneumoniae isolate 46464

characteristic: description

text: Human

text: Blood

text: Blood

text: Germany

text: human-associated

text: mimarks-survey

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

text: Illumina MiSeq

characteristic: sequencing method

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: CEBITEC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: collection date

text: Draft genome of Streptococcus pneumoniae isolate 47301

text: Human

characteristic: environment (biome)

text: CSF

characteristic: environment (feature)

text: CSF

characteristic: environment (material)

text: Germany

text: human-associated

text: mimarks-survey

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Illumina MiSeq


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: CEBITEC

text: public

text: Draft genome of Streptococcus pneumoniae isolate 48565

text: Human

text: Middle ear fluid

text: Middle ear fluid

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-associated

characteristic: human associated environmental package

text: mimarks-survey

characteristic: investigation type

characteristic: isolate

text: Streptococcus pneumoniae

characteristic: project name

text: Streptococcus pneumoniae

text: Illumina MiSeq


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: BAYLOR COLLEGE OF ME

characteristic: INSDC center name

text: public

characteristic: SRA accession

tag: Namespace:BAYLOR COLLEGE OF ME

characteristic: Submitter Id

text: Escherichia coli K-12

characteristic: organism

text: Escherichia coli K-12

text: ChIP-Seq samples

characteristic: title


text: University of the Ryukyus

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:University of the Ryukyus

text: metagenome

text: metagenome


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: public

tag: Namespace:Key Laboratory of Environmental and Applied Microbiology, CAS

characteristic: collection date

text: Compositional and functional variations of pika gut microbiota

characteristic: description

text: gut

characteristic: environment (biome)

text: gut

characteristic: environment (feature)

text: gut content

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: gut metagenome

text: gut metagenome

text: Miseq

characteristic: sequencing method


tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: Key Laboratory of Environmental and Applied Microbiology, CAS

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: gut

text: gut

text: gut content

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: gut metagenome

characteristic: project name

text: gut metagenome

text: Miseq


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: WEIZMANN INSTITUE OF SCIENCE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:WEIZMANN INSTITUE OF SCIENCE

characteristic: Submitter Id

text: Methanosarcina mazei, Nitrogen rich condition, standard RNA-seq

text: Methanosarcina mazei Go1

characteristic: organism

text: Methanosarcina mazei Go1

text: RNAseq

characteristic: title


text: WEIZMANN INSTITUE OF SCIENCE

text: public

text: Methanosarcina mazei, Nitrogen rich condition, term-seq paired end sequencing

characteristic: description

text: Methanosarcina mazei Go1

text: Methanosarcina mazei Go1


characteristic: ENA-CHECKLIST

text: WEIZMANN INSTITUE OF SCIENCE

text: public

text: Sulfolobus acidocaldarius term-seq paired end sequencing

text: Sulfolobus acidocaldarius DSM 639

text: Sulfolobus acidocaldarius DSM 639


text: Anopheles Gambiae

characteristic: ArrayExpress-Species

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: African malaria mosquito

characteristic: common name

text: Anopheles gambiae

text: Anopheles gambiae


characteristic: INSDC center name

text: public

characteristic: SRA accession

tag: Namespace:Institute of Molecular Oncology, Philipps-Universitat Marburg, Marburg, Germany

text: ArrayExpress

characteristic: broker name

text: HeLa

characteristic: cell line

text: human

text: Protocols: Human cervix carcinoma cells (HeLa) were cultured in DMEM high glucose/ 10 % FCS, 2 mM glutamine, 100 U/mL penicillin, 100 mg/mL streptomycin. Human kidney clear cell carcinoma cells (RCC-FG1) were cultured in Mc Coy s 5a/ 10 % FCS, 2 mM glutamin at 37 °C and high humidity. HeLa cells were transfected by electroporation with the Biorad Gene Pulser II. Up to 15 μg of siRNA were used for silencing of galectin-3 and/or galectin-1. For successful depletion the cells were transfected twice and harvested 48 h thereafter. HeLa cells were transfected with siRNA to silence galectin-3 and with the non-silencing control siRNA against firefly luciferase. Total RNA was isolated with the RNeasy Mini Kit (Qiagen). Libraries were prepared using the TruSeq® Stranded mRNA LT Kit according to maufacturer's instructions.

text: Homo sapiens

text: Homo sapiens

text: siRNA Galectin 3

characteristic: rna

text: Homo sapiens


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: Institute of Molecular Oncology, Philipps-Universitat Marburg, Marburg, Germany

text: public

text: ArrayExpress

text: HeLa

text: human

text: Homo sapiens

text: Homo sapiens

text: siRNA Galectin 3

text: Homo sapiens


characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ArrayExpress

text: HeLa

text: human

text: Homo sapiens

text: Homo sapiens

text: siRNA Luciferase 3

text: Homo sapiens


text: LIMM

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: human

text: SM validation

text: Homo sapiens

text: Homo sapiens


text: Homo sapiens

text: SC

text: public

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

characteristic: title


Col0_late A

characteristic: ENA-CHECKLIST

text: IPK-Gatersleben

text: public

text: Col0_late A

text: thale cress

text: WT ovules late phase A

characteristic: description

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: ovule

characteristic: tissue type

text: WT ovules late


Col0_late B

characteristic: ENA-LAST-UPDATE

text: IPK-Gatersleben

text: public

text: Col0_late B

text: thale cress

characteristic: common name

text: WT ovules late phase B

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: ovule

text: WT ovules late


Col0_late C

text: IPK-Gatersleben

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: Col0_late C

text: thale cress

text: WT ovules late phase C

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: ovule

text: WT ovules late


rkd3-2_late A

text: IPK-Gatersleben

text: public

text: rkd3-2_late A

text: thale cress

text: rkd mutant ovules late phase A

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: ovule

text: rkd mutant late phase


rkd3-2_late B

text: IPK-Gatersleben

text: public

text: rkd3-2_late B

text: thale cress

text: rkd mutant ovules late phase B

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: ovule

text: rkd mutant late phase


rkd3-2_late C

text: IPK-Gatersleben

text: public

text: rkd3-2_late C

text: thale cress

text: rkd mutant ovules late phase C

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: ovule

text: rkd mutant late phase


text: IPK-Gatersleben

text: public

text: thale cress

text: WT ovules early phase 1

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: ovule

text: WT ovules early


text: IPK-Gatersleben

text: public

text: thale cress

text: WT ovules early phase 2

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: ovule

text: WT ovules early


text: IPK-Gatersleben

text: public

text: thale cress

text: WT ovules late phase 1

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: ovule

text: WT ovules late


text: IPK-Gatersleben

text: public

text: thale cress

text: WT ovules late phase 2

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: ovule

text: WT ovules late


text: IPK-Gatersleben

text: public

text: thale cress

text: rkd mutant ovules early phase

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: ovule

text: rkd mutant early phase


text: IPK-Gatersleben

text: public

text: thale cress

text: rkd mutant ovules late phase

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: ovule

text: rkd mutant late phase


E-MTAB-4618:Sample 1

text: public

text: E-MTAB-4618:Sample 1

tag: Namespace:Advanced Centre for Treatment, Research and Education in Cancer (ACTREC)

text: ArrayExpress

characteristic: broker name

text: human

text: Protocols: Tissues stored in LN2 TruSeq V2_V3

text: cervical squamous cell carcinoma

characteristic: disease

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

characteristic: organism part

text: Homo sapiens

text: Sample 1


E-MTAB-4618:Sample 10

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: Advanced Centre for Treatment, Research and Education in Cancer (ACTREC)

characteristic: INSDC first public

text: public

text: E-MTAB-4618:Sample 10

text: ArrayExpress

text: human

text: cervical squamous cell carcinoma

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

text: Homo sapiens

text: Sample 10


E-MTAB-4618:Sample 11

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-4618:Sample 11

characteristic: Submitter Id

text: ArrayExpress

text: human

text: Protocols: Tissues stored in LN2 SuresSelect V5

text: cervical adenocarcinoma

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

text: Homo sapiens

text: Sample 11


E-MTAB-4618:Sample 12

characteristic: ENA-CHECKLIST

text: public

text: E-MTAB-4618:Sample 12

text: ArrayExpress

text: human

text: cervical adenocarcinoma

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: uterine cervix

text: Homo sapiens

text: Sample 12

characteristic: title


E-MTAB-4618:Sample 13

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-4618:Sample 13

text: ArrayExpress

text: human

characteristic: description

text: cervical adenocarcinoma

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

text: Homo sapiens

text: Sample 13


E-MTAB-4618:Sample 14

characteristic: INSDC center name

text: public

text: E-MTAB-4618:Sample 14

text: ArrayExpress

text: human

characteristic: common name

text: cervical adenocarcinoma

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

text: Homo sapiens

text: Sample 14


E-MTAB-4618:Sample 15

text: public

characteristic: SRA accession

text: E-MTAB-4618:Sample 15

text: ArrayExpress

characteristic: broker name

text: human

text: cervical adenocarcinoma

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

text: Homo sapiens

text: Sample 15


E-MTAB-4618:Sample 16

text: public

text: E-MTAB-4618:Sample 16

text: ArrayExpress

text: human

text: cervical adenocarcinoma

characteristic: disease

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

text: Homo sapiens

text: Sample 16


E-MTAB-4618:Sample 17

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-4618:Sample 17

text: ArrayExpress

text: human

text: cervical adenocarcinoma

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

characteristic: organism part

text: Homo sapiens

text: Sample 17


E-MTAB-4618:Sample 18

characteristic: External Id

characteristic: INSDC first public

text: public

text: E-MTAB-4618:Sample 18

text: ArrayExpress

text: human

text: cervical adenocarcinoma

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

text: Homo sapiens

text: Sample 18


E-MTAB-4618:Sample 19

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-4618:Sample 19

text: ArrayExpress

text: human

text: cervical adenocarcinoma

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

text: Homo sapiens

text: Sample 19


E-MTAB-4618:Sample 2

characteristic: ENA-CHECKLIST

text: public

text: E-MTAB-4618:Sample 2

characteristic: Submitter Id

text: ArrayExpress

text: human

text: cervical squamous cell carcinoma

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

text: Homo sapiens

text: Sample 2


E-MTAB-4618:Sample 20

text: public

text: E-MTAB-4618:Sample 20

text: ArrayExpress

text: human

text: cervical adenocarcinoma

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: uterine cervix

text: Homo sapiens

text: Sample 20

characteristic: title


E-MTAB-4618:Sample 21

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-4618:Sample 21

text: ArrayExpress

text: human

characteristic: description

text: cervical adenocarcinoma

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

text: Homo sapiens

text: Sample 21


E-MTAB-4618:Sample 22

characteristic: INSDC center name

text: public

text: E-MTAB-4618:Sample 22

text: ArrayExpress

text: human

characteristic: common name

text: cervical adenocarcinoma

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

text: Homo sapiens

text: Sample 22


E-MTAB-4618:Sample 23

text: public

characteristic: SRA accession

text: E-MTAB-4618:Sample 23

text: ArrayExpress

characteristic: broker name

text: human

text: cervical adenocarcinoma

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

text: Homo sapiens

text: Sample 23


E-MTAB-4618:Sample 24

text: public

text: E-MTAB-4618:Sample 24

text: ArrayExpress

text: human

text: cervical adenocarcinoma

characteristic: disease

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

text: Homo sapiens

text: Sample 24


E-MTAB-4618:Sample 25

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-4618:Sample 25

text: ArrayExpress

text: human

text: cervical adenocarcinoma

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

characteristic: organism part

text: Homo sapiens

text: Sample 25


E-MTAB-4618:Sample 26

characteristic: External Id

characteristic: INSDC first public

text: public

text: E-MTAB-4618:Sample 26

text: ArrayExpress

text: human

text: cervical adenocarcinoma

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

text: Homo sapiens

text: Sample 26


E-MTAB-4618:Sample 27

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-4618:Sample 27

text: ArrayExpress

text: human

text: cervical adenocarcinoma

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

text: Homo sapiens

text: Sample 27


E-MTAB-4618:Sample 28

characteristic: ENA-CHECKLIST

text: public

text: E-MTAB-4618:Sample 28

characteristic: Submitter Id

text: ArrayExpress

text: human

text: cervical adenocarcinoma

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

text: Homo sapiens

text: Sample 28


E-MTAB-4618:Sample 29

text: public

text: E-MTAB-4618:Sample 29

text: ArrayExpress

text: human

text: Protocols: Tissues stored in LN2 Genomic DNA extraction SuresSelect V5

text: gallbladder neoplasm

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: gallbladder

text: Homo sapiens

text: Sample 29

characteristic: title


E-MTAB-4618:Sample 3

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-4618:Sample 3

text: ArrayExpress

text: human

characteristic: description

text: cervical squamous cell carcinoma

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

text: Homo sapiens

text: Sample 3


E-MTAB-4618:Sample 30

characteristic: INSDC center name

text: public

text: E-MTAB-4618:Sample 30

text: ArrayExpress

text: human

characteristic: common name

text: gallbladder neoplasm

text: Homo sapiens

text: Homo sapiens

text: gallbladder

text: Homo sapiens

text: Sample 30


E-MTAB-4618:Sample 31

text: public

characteristic: SRA accession

text: E-MTAB-4618:Sample 31

text: ArrayExpress

characteristic: broker name

text: human

text: gallbladder neoplasm

text: Homo sapiens

text: Homo sapiens

text: gallbladder

text: Homo sapiens

text: Sample 31


E-MTAB-4618:Sample 32

text: public

text: E-MTAB-4618:Sample 32

text: ArrayExpress

text: human

text: gallbladder neoplasm

characteristic: disease

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: gallbladder

text: Homo sapiens

text: Sample 32


E-MTAB-4618:Sample 33

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-4618:Sample 33

text: ArrayExpress

text: human

text: gallbladder neoplasm

text: Homo sapiens

text: Homo sapiens

text: gallbladder

characteristic: organism part

text: Homo sapiens

text: Sample 33


E-MTAB-4618:Sample 34

characteristic: External Id

characteristic: INSDC first public

text: public

text: E-MTAB-4618:Sample 34

text: ArrayExpress

text: human

text: gallbladder neoplasm

text: Homo sapiens

text: Homo sapiens

text: gallbladder

text: Homo sapiens

text: Sample 34


E-MTAB-4618:Sample 35

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-4618:Sample 35

text: ArrayExpress

text: human

text: gallbladder neoplasm

text: Homo sapiens

text: Homo sapiens

text: gallbladder

text: Homo sapiens

text: Sample 35


E-MTAB-4618:Sample 36

characteristic: ENA-CHECKLIST

text: public

text: E-MTAB-4618:Sample 36

characteristic: Submitter Id

text: ArrayExpress

text: human

text: gallbladder neoplasm

text: Homo sapiens

text: Homo sapiens

text: gallbladder

text: Homo sapiens

text: Sample 36


E-MTAB-4618:Sample 37

text: public

text: E-MTAB-4618:Sample 37

text: ArrayExpress

text: human

text: gallbladder neoplasm

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: gallbladder

text: Homo sapiens

text: Sample 37

characteristic: title


E-MTAB-4618:Sample 38

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-4618:Sample 38

text: ArrayExpress

text: human

characteristic: description

text: gallbladder neoplasm

text: Homo sapiens

text: Homo sapiens

text: gallbladder

text: Homo sapiens

text: Sample 38


E-MTAB-4618:Sample 39

characteristic: INSDC center name

text: public

text: E-MTAB-4618:Sample 39

text: ArrayExpress

text: human

characteristic: common name

text: gallbladder neoplasm

text: Homo sapiens

text: Homo sapiens

text: gallbladder

text: Homo sapiens

text: Sample 39


E-MTAB-4618:Sample 4

text: public

characteristic: SRA accession

text: E-MTAB-4618:Sample 4

text: ArrayExpress

characteristic: broker name

text: human

text: cervical squamous cell carcinoma

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

text: Homo sapiens

text: Sample 4


E-MTAB-4618:Sample 40

text: public

text: E-MTAB-4618:Sample 40

text: ArrayExpress

text: human

text: head and neck neoplasia

characteristic: disease

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: tongue

text: Homo sapiens

text: Sample 40


E-MTAB-4618:Sample 41

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-4618:Sample 41

text: ArrayExpress

text: human

text: head and neck neoplasia

text: Homo sapiens

text: Homo sapiens

text: tongue

characteristic: organism part

text: Homo sapiens

text: Sample 41


E-MTAB-4618:Sample 42

characteristic: External Id

characteristic: INSDC first public

text: public

text: E-MTAB-4618:Sample 42

text: ArrayExpress

text: human

text: head and neck neoplasia

text: Homo sapiens

text: Homo sapiens

text: tongue

text: Homo sapiens

text: Sample 42


E-MTAB-4618:Sample 43

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-4618:Sample 43

text: ArrayExpress

text: human

text: Protocols: Tissues stored in LN2 NimbleGen SeqCap EZ Exome Library V3

text: head and neck neoplasia

text: Homo sapiens

text: Homo sapiens

text: tongue

text: Homo sapiens

text: Sample 43


E-MTAB-4618:Sample 44

characteristic: ENA-CHECKLIST

text: public

text: E-MTAB-4618:Sample 44

characteristic: Submitter Id

text: ArrayExpress

text: human

text: head and neck neoplasia

text: Homo sapiens

text: Homo sapiens

text: tongue

text: Homo sapiens

text: Sample 44


E-MTAB-4618:Sample 45

text: public

text: E-MTAB-4618:Sample 45

text: ArrayExpress

text: human

text: head and neck neoplasia

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: tongue

text: Homo sapiens

text: Sample 45

characteristic: title


E-MTAB-4618:Sample 46

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-4618:Sample 46

text: ArrayExpress

text: human

characteristic: description

text: head and neck neoplasia

text: Homo sapiens

text: Homo sapiens

text: tongue

text: Homo sapiens

text: Sample 46


E-MTAB-4618:Sample 47

characteristic: INSDC center name

text: public

text: E-MTAB-4618:Sample 47

text: ArrayExpress

text: human

characteristic: common name

text: head and neck neoplasia

text: Homo sapiens

text: Homo sapiens

text: tongue

text: Homo sapiens

text: Sample 47


E-MTAB-4618:Sample 48

text: public

characteristic: SRA accession

text: E-MTAB-4618:Sample 48

text: ArrayExpress

characteristic: broker name

text: human

text: head and neck neoplasia

text: Homo sapiens

text: Homo sapiens

text: tongue

text: Homo sapiens

text: Sample 48


E-MTAB-4618:Sample 49

text: public

text: E-MTAB-4618:Sample 49

text: ArrayExpress

text: human

text: head and neck neoplasia

characteristic: disease

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: tongue

text: Homo sapiens

text: Sample 49


E-MTAB-4618:Sample 5

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-4618:Sample 5

text: ArrayExpress

text: human

text: cervical squamous cell carcinoma

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

characteristic: organism part

text: Homo sapiens

text: Sample 5


E-MTAB-4618:Sample 50

characteristic: External Id

characteristic: INSDC first public

text: public

text: E-MTAB-4618:Sample 50

text: ArrayExpress

text: human

text: head and neck neoplasia

text: Homo sapiens

text: Homo sapiens

text: tongue

text: Homo sapiens

text: Sample 50


E-MTAB-4618:Sample 51

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-4618:Sample 51

text: ArrayExpress

text: human

text: head and neck neoplasia

text: Homo sapiens

text: Homo sapiens

text: tongue

text: Homo sapiens

text: Sample 51


E-MTAB-4618:Sample 52

characteristic: ENA-CHECKLIST

text: public

text: E-MTAB-4618:Sample 52

characteristic: Submitter Id

text: ArrayExpress

text: human

text: head and neck neoplasia

text: Homo sapiens

text: Homo sapiens

text: tongue

text: Homo sapiens

text: Sample 52


E-MTAB-4618:Sample 53

text: public

text: E-MTAB-4618:Sample 53

text: ArrayExpress

text: human

text: head and neck neoplasia

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: tongue

text: Homo sapiens

text: Sample 53

characteristic: title


E-MTAB-4618:Sample 54

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-4618:Sample 54

text: ArrayExpress

text: human

characteristic: description

text: head and neck neoplasia

text: Homo sapiens

text: Homo sapiens

text: tongue

text: Homo sapiens

text: Sample 54


E-MTAB-4618:Sample 55

characteristic: INSDC center name

text: public

text: E-MTAB-4618:Sample 55

text: ArrayExpress

text: human

characteristic: common name

text: head and neck neoplasia

text: Homo sapiens

text: Homo sapiens

text: tongue

text: Homo sapiens

text: Sample 55


E-MTAB-4618:Sample 56

text: public

characteristic: SRA accession

text: E-MTAB-4618:Sample 56

text: ArrayExpress

characteristic: broker name

text: human

text: head and neck neoplasia

text: Homo sapiens

text: Homo sapiens

text: tongue

text: Homo sapiens

text: Sample 56


E-MTAB-4618:Sample 57

text: public

text: E-MTAB-4618:Sample 57

text: ArrayExpress

text: human

text: head and neck neoplasia

characteristic: disease

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: tongue

text: Homo sapiens

text: Sample 57


E-MTAB-4618:Sample 58

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-4618:Sample 58

text: ArrayExpress

text: human

text: Protocols: Tissues stored in LN2 TruSeq V2_V3 NimbleGen SeqCap EZ Exome Library V3

text: head and neck neoplasia

text: Homo sapiens

text: Homo sapiens

text: tongue

characteristic: organism part

text: Homo sapiens

text: Sample 58


E-MTAB-4618:Sample 59

characteristic: External Id

characteristic: INSDC first public

text: public

text: E-MTAB-4618:Sample 59

text: ArrayExpress

text: human

text: head and neck neoplasia

text: Homo sapiens

text: Homo sapiens

text: tongue

text: Homo sapiens

text: Sample 59


E-MTAB-4618:Sample 6

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-4618:Sample 6

text: ArrayExpress

text: human

text: cervical squamous cell carcinoma

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

text: Homo sapiens

text: Sample 6


E-MTAB-4618:Sample 60

characteristic: ENA-CHECKLIST

text: public

text: E-MTAB-4618:Sample 60

characteristic: Submitter Id

text: ArrayExpress

text: human

text: head and neck neoplasia

text: Homo sapiens

text: Homo sapiens

text: tongue

text: Homo sapiens

text: Sample 60


E-MTAB-4618:Sample 61

text: public

text: E-MTAB-4618:Sample 61

text: ArrayExpress

text: human

text: head and neck neoplasia

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: tongue

text: Homo sapiens

text: Sample 61

characteristic: title


E-MTAB-4618:Sample 62

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-4618:Sample 62

text: ArrayExpress

text: human

characteristic: description

text: head and neck neoplasia

text: Homo sapiens

text: Homo sapiens

text: tongue

text: Homo sapiens

text: Sample 62


E-MTAB-4618:Sample 7

characteristic: INSDC center name

text: public

text: E-MTAB-4618:Sample 7

text: ArrayExpress

text: human

characteristic: common name

text: cervical squamous cell carcinoma

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

text: Homo sapiens

text: Sample 7


E-MTAB-4618:Sample 8

text: public

characteristic: SRA accession

text: E-MTAB-4618:Sample 8

text: ArrayExpress

characteristic: broker name

text: human

text: cervical squamous cell carcinoma

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

text: Homo sapiens

text: Sample 8


E-MTAB-4618:Sample 9

text: public

text: E-MTAB-4618:Sample 9

text: ArrayExpress

text: human

text: cervical squamous cell carcinoma

characteristic: disease

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

text: Homo sapiens

text: Sample 9


characteristic: ENA-FIRST-PUBLIC

text: Genoscope CEA

text: public

characteristic: isolate

text: isolated from soil from the Genoscope premises

characteristic: isolation source

text: 48.623 N 2.440 E

characteristic: lat lon

text: uncultured Desulfovibrio sp.

text: uncultured Desulfovibrio sp.

text: prokaryotic genome sequencing


characteristic: External Id

text: Genoscope CEA

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: 48.623 N 2.440 E

text: uncultured Pleomorphomonas sp.

text: uncultured Pleomorphomonas sp.

text: Prokaryotic genome sequencing


characteristic: ENA-CHECKLIST

text: Genoscope CEA

text: public

characteristic: Submitter Id

text: 48.623 N 2.440 E

text: uncultured Sporomusa sp.

characteristic: organism

text: uncultured Sporomusa sp.

text: Prokaryotic genome sequencing

characteristic: title


characteristic: ENA-LAST-UPDATE

text: CEBITEC

characteristic: INSDC center name

text: public

characteristic: collection date

text: Draft genome of Streptococcus pneumoniae isolate 37752

characteristic: description

text: human

characteristic: environment (biome)

text: ear

characteristic: environment (feature)

text: ear

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-associated

characteristic: human associated environmental package

text: mimarks-survey

characteristic: investigation type

text: Streptococcus pneumoniae

characteristic: project name

text: Streptococcus pneumoniae

text: Illumina MiSeq

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: CEBITEC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Draft genome of Streptococcus pneumoniae isolate 42694

text: human

text: Middle ear fluid

text: Middle ear fluid

text: Germany

text: human-associated

text: mimarks-survey

characteristic: isolate

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Illumina MiSeq


characteristic: ENA-LAST-UPDATE

text: CEBITEC

characteristic: INSDC center name

text: public

characteristic: collection date

text: Draft genome of Streptococcus pneumoniae isolate 23150

characteristic: description

text: human

characteristic: environment (biome)

text: not specified

characteristic: environment (feature)

text: not specified

characteristic: environment (material)

text: Germany

text: human-associated

text: mimarks-survey

text: Streptococcus pneumoniae

characteristic: organism

text: not specified

text: Streptococcus pneumoniae

text: Illumina Miseq

characteristic: title


name: Illumina sequencing of Elizabethkingia anophelis CIP78.9

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: INSTITUT PASTEUR

text: public

tag: Namespace:INSTITUT PASTEUR

text: New York State Dept. Of Health, USA

characteristic: collected by

text: USA

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: host health state

text: human

characteristic: host scientific name

text: blood

characteristic: isolation source

text: Elizabethkingia anophelis

text: Elizabethkingia anophelis

characteristic: strain

text: Illumina sequencing of Elizabethkingia strains


name: Illumina sequencing of Elizabethkingia anophelis CIP60.59

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INSTITUT PASTEUR

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: E.O. King, CDC Atlanta, USA

text: USA

text: not provided

text: human

characteristic: isolate

text: cerebrospinal fluid

text: Elizabethkingia anophelis

text: Elizabethkingia anophelis


name: Illumina sequencing of Elizabethkingia anophelis CIP104057

text: INSTITUT PASTEUR

characteristic: INSDC center name

text: public

characteristic: collection date

text: USA

text: not provided

text: clinical specimen

text: Elizabethkingia anophelis

characteristic: organism

text: Elizabethkingia anophelis

characteristic: title


name: Illumina sequencing of Elizabethkingia anophelis CIP108654

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: INSTITUT PASTEUR

text: public

text: Keck N., LDV Herault, Montpellier, France

characteristic: collected by

text: France

characteristic: geographic location (country and/or sea)

text: not provided

text: Cyprinus carpio

text: internal organs

text: Elizabethkingia anophelis

text: Elizabethkingia anophelis


name: Illumina sequencing of Elizabethkingia anophelis CIP79.29

text: INSTITUT PASTEUR

text: public

text: St Nazaire Hospital, France

text: France

text: not provided

characteristic: host health state

text: human

characteristic: host scientific name

text: blood

characteristic: isolation source

text: Elizabethkingia anophelis

text: Elizabethkingia anophelis

characteristic: strain


name: Illumina sequencing of Elizabethkingia meningoseptica CIP80.33

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INSTITUT PASTEUR

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Pechter I., Israel

text: Israel

text: not provided

text: human

text: tracheal exsudate

text: Elizabethkingia meningoseptica

text: Elizabethkingia meningoseptica


name: Illumina sequencing of Elizabethkingia miricola CIP108653

text: INSTITUT PASTEUR

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: France

text: not provided

text: Xenopus laevi

characteristic: isolate

text: spleen

text: Elizabethkingia miricola

text: Elizabethkingia miricola


text: LSHTM

characteristic: INSDC center name

text: public

characteristic: collection date

text: E. coli A192

characteristic: description

text: Netherlands

text: diseased

text: Human

text: Blood

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: E. coli A192

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: LSHTM

text: public

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: rat

text: blood

text: Escherichia coli

text: Escherichia coli


characteristic: ENA-LAST-UPDATE

text: University of Antwerp

text: public

tag: Namespace:University of Antwerp

text: Urban plant 5a

text: City

characteristic: environment (biome)

text: Plant

characteristic: environment (feature)

text: Leaves

characteristic: environment (material)

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: urban metagenome

text: plant-associated

characteristic: plant-associated environmental package

text: Ivy phyllosphere

characteristic: project name

text: urban metagenome

text: Illumina

characteristic: sequencing method


characteristic: External Id

text: University of Antwerp

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Urban plant 5b

characteristic: description

text: City

text: Plant

text: Leaves

text: Belgium

text: mimarks-survey

text: urban metagenome

text: plant-associated

text: Ivy phyllosphere

text: urban metagenome

text: Illumina