name: Monash University Malaysia Genomics Facility, Unamended soil, replicate 2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

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characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: BRAEMBL

characteristic: broker name

text: UPARSE

characteristic: chimera check

characteristic: collection date

characteristic: depth

characteristic: description

text: Agricultural land

characteristic: environment (biome)

text: Irrigated field

text: soil

text: Australia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

text: Cranbourne, Victoria

text: Unamended soil

text: metagenome

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characteristic: organism

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characteristic: project name

text: soil metagenome

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characteristic: sequencing method

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text: Dermosol

text: frozen at -20°C for 7 days

text: Metagenome of unamended soil

characteristic: title

text: Leco IR analyser

text: Leco IR analyser


name: Monash University Malaysia Genomics Facility, Soil amended with commercial soluble humate granules applied at 300 kg/ha, replicate 4

status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MONASH-CHEM

characteristic: INSDC center name

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text: public

text: BRAEMBL

text: UPARSE

unit: m

text: Amplicon sequencing of the metagenome of soil amended with commercial soluble humate granules applied at 300 kg/ha.

text: Agricultural land

text: Irrigated field

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Australia

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Cranbourne, Victoria

characteristic: geographic location (region and locality)

characteristic: history/agrochemical additions

text: metagenome

characteristic: investigation type

text: soil metagenome

unit: g

characteristic: sample weight for DNA extraction

text: soil metagenome

text: Illumina

text: soil

characteristic: soil environmental package

text: Dermosol

characteristic: soil taxonomic/local classification

text: Isbell, 2002, The Australian Soil Classification, revised edn (CSIRO Publishing: Melbourne)

characteristic: soil taxonomic/local classification method

text: frozen at -20°C for 7 days

characteristic: storage conditions (fresh/frozen/other)

text: Metagenome of soil amended with commercial soluble humate granules applied at 300 kg/ha

characteristic: total nitrogen (percent)

text: Leco IR analyser

characteristic: total nitrogen method

text: Leco IR analyser

characteristic: total organic C method

characteristic: total organic carbon (percent)

type: has member


name: Monash University Malaysia Genomics Facility, Soil amended with commercial soluble humate granules applied at 300 kg/ha, replicate 5

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

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characteristic: External Id

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characteristic: INSDC center name

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characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

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characteristic: chimera check

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characteristic: depth

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text: Agricultural land

characteristic: environment (biome)

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text: soil

text: Australia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

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text: metagenome

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characteristic: organism

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name: Monash University Malaysia Genomics Facility, Soil amended with commercial soluble humate granules applied at 20 kg/ha, replicate 2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MONASH-CHEM

characteristic: INSDC center name

characteristic: INSDC first public

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text: Agricultural land

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characteristic: environment (feature)

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characteristic: environment (material)

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characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

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characteristic: geographic location (region and locality)

characteristic: history/agrochemical additions

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characteristic: investigation type

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characteristic: sample weight for DNA extraction

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characteristic: soil taxonomic/local classification

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characteristic: storage conditions (fresh/frozen/other)

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characteristic: total nitrogen (percent)

text: Leco IR analyser

characteristic: total nitrogen method

text: Leco IR analyser

characteristic: total organic C method

characteristic: total organic carbon (percent)


name: Monash University Malaysia Genomics Facility, Unamended soil, replicate 3

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

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text: MONASH-CHEM

characteristic: INSDC center name

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characteristic: description

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characteristic: environment (biome)

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text: metagenome

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characteristic: organism

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characteristic: project name

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characteristic: title

text: Leco IR analyser

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name: Monash University Malaysia Genomics Facility, Soil amended with commercial soluble humate granules applied at 20 kg/ha, replicate 3

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MONASH-CHEM

characteristic: INSDC center name

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text: public

text: BRAEMBL

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text: Agricultural land

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characteristic: environment (feature)

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text: Australia

characteristic: geographic location (latitude)

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text: Cranbourne, Victoria

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characteristic: total nitrogen (percent)

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characteristic: total organic C method

characteristic: total organic carbon (percent)


name: Monash University Malaysia Genomics Facility, Soil amended with commercial soluble humate granules applied at 20 kg/ha, replicate 1

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name: Monash University Malaysia Genomics Facility, Soil amended with commercial soluble humate granules applied at 20 kg/ha, replicate 5

characteristic: ENA-CHECKLIST

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characteristic: External Id

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text: Cranbourne, Victoria

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characteristic: total nitrogen method

text: Leco IR analyser

characteristic: total organic C method

characteristic: total organic carbon (percent)


name: Monash University Malaysia Genomics Facility, Soil amended with commercial soluble humate granules applied at 300 kg/ha, replicate 3

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

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text: Agricultural land

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text: Australia

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text: metagenome

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characteristic: organism

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text: Dermosol

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text: Leco IR analyser

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name: Monash University Malaysia Genomics Facility, Soil amended with commercial soluble humate granules applied at 20 kg/ha, replicate 4

characteristic: ENA-CHECKLIST

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characteristic: External Id

text: MONASH-CHEM

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text: Cranbourne, Victoria

characteristic: geographic location (region and locality)

characteristic: history/agrochemical additions

text: metagenome

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text: soil metagenome

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text: frozen at -20°C for 7 days

characteristic: storage conditions (fresh/frozen/other)

characteristic: total nitrogen (percent)

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characteristic: total organic C method

characteristic: total organic carbon (percent)


characteristic: ENA-CHECKLIST

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characteristic: External Id

text: WUR

characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

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text: starting sample

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text: contaminated sediment

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text: enrichment culture

text: liquid culture

text: Netherlands

characteristic: geographic location (country and/or sea)

text: mimarks-survey

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characteristic: miscellaneous environmental package

text: enrichment culture

characteristic: organism

text: Response of OHRB to treatment with permanganate

characteristic: project name

text: enrichment culture

text: pyrosequencing

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characteristic: title


characteristic: ENA-CHECKLIST

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text: WUR

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text: Biotic control day 7

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text: Netherlands

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text: mimarks-survey

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text: pyrosequencing


characteristic: External Id

text: WUR

characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

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text: Biotic Control day 7

text: contaminated sediment

text: enrichment culture

text: liquid culture

text: Netherlands

text: mimarks-survey

text: enrichment culture

text: enrichment culture

text: pyrosequencing


text: WUR

text: public

text: Biotic Control day 13

characteristic: description

text: contaminated sediment

characteristic: environment (biome)

text: enrichment culture

text: liquid culture

text: Netherlands

characteristic: geographic location (country and/or sea)

text: mimarks-survey

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text: enrichment culture

characteristic: organism

characteristic: project name

text: enrichment culture

text: pyrosequencing

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characteristic: title


characteristic: ENA-CHECKLIST

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text: WUR

text: public

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characteristic: environment (feature)

text: liquid culture

characteristic: environment (material)

text: Netherlands

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: enrichment culture

text: enrichment culture

text: pyrosequencing


characteristic: External Id

text: WUR

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Low dose PM day 7

text: contaminated sediment

text: enrichment culture

text: liquid culture

text: Netherlands

text: mimarks-survey

text: enrichment culture

text: enrichment culture

text: pyrosequencing


text: WUR

text: public

text: Low dose PM day 13

characteristic: description

text: contaminated sediment

characteristic: environment (biome)

text: enrichment culture

text: liquid culture

text: Netherlands

characteristic: geographic location (country and/or sea)

text: mimarks-survey

characteristic: miscellaneous environmental package

text: enrichment culture

characteristic: organism

characteristic: project name

text: enrichment culture

text: pyrosequencing

characteristic: sequencing method

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: WUR

text: public

text: Low dose PM day 21

text: contaminated sediment

text: enrichment culture

characteristic: environment (feature)

text: liquid culture

characteristic: environment (material)

text: Netherlands

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: enrichment culture

text: enrichment culture

text: pyrosequencing


characteristic: External Id

text: WUR

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Medium dose PM day 7

text: contaminated sediment

text: enrichment culture

text: liquid culture

text: Netherlands

text: mimarks-survey

text: enrichment culture

text: enrichment culture

text: pyrosequencing


text: WUR

text: public

text: Medium dose PM day 13

characteristic: description

text: contaminated sediment

characteristic: environment (biome)

text: enrichment culture

text: liquid culture

text: Netherlands

characteristic: geographic location (country and/or sea)

text: mimarks-survey

characteristic: miscellaneous environmental package

text: enrichment culture

characteristic: organism

characteristic: project name

text: enrichment culture

text: pyrosequencing

characteristic: sequencing method

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: WUR

text: public

text: Medium dose PM day 21

text: contaminated sediment

text: enrichment culture

characteristic: environment (feature)

text: liquid culture

characteristic: environment (material)

text: Netherlands

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: enrichment culture

text: enrichment culture

text: pyrosequencing


characteristic: External Id

text: WUR

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: High dose PM day 13

text: contaminated sediment

text: enrichment culture

text: liquid culture

text: Netherlands

text: mimarks-survey

text: enrichment culture

text: enrichment culture

text: pyrosequencing


text: WUR

text: public

text: High dose PM day 21

characteristic: description

text: contaminated sediment

characteristic: environment (biome)

text: enrichment culture

text: liquid culture

text: Netherlands

characteristic: geographic location (country and/or sea)

text: mimarks-survey

characteristic: miscellaneous environmental package

text: enrichment culture

characteristic: organism

characteristic: project name

text: enrichment culture

text: pyrosequencing

characteristic: sequencing method

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: WUR

text: public

text: High dose PM day 33

text: contaminated sediment

text: enrichment culture

characteristic: environment (feature)

text: liquid culture

characteristic: environment (material)

text: Netherlands

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: enrichment culture

text: enrichment culture

text: pyrosequencing


characteristic: External Id

text: WUR

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: High dose PM day 163

text: contaminated sediment

text: enrichment culture

text: liquid culture

text: Netherlands

text: mimarks-survey

text: enrichment culture

text: enrichment culture

text: pyrosequencing


text: WUR

text: public

text: High dose PM day 246

characteristic: description

text: contaminated sediment

characteristic: environment (biome)

text: enrichment culture

text: liquid culture

text: Netherlands

characteristic: geographic location (country and/or sea)

text: mimarks-survey

characteristic: miscellaneous environmental package

text: enrichment culture

characteristic: organism

characteristic: project name

text: enrichment culture

text: pyrosequencing

characteristic: sequencing method

characteristic: title


ADG.A

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: NIOO KNAW

text: public

text: ADG.A

tag: Namespace:NIOO KNAW

characteristic: depth

text: Replicate 'A' from deforested site 3

text: Amazon tropical rainforest

text: forest

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Brazil

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: uncultured bacterium

text: Amazon soil 16S rDNA amplicons 1

text: uncultured bacterium

text: Pyrosequencing

text: soil

characteristic: soil environmental package

text: deforestation


ADG.C

characteristic: External Id

text: NIOO KNAW

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ADG.C

characteristic: Submitter Id

characteristic: collection date

text: Replicate 'C' from deforested site 3

characteristic: description

text: Amazon tropical rainforest

characteristic: environment (biome)

text: forest

text: soil

text: Brazil

characteristic: geographic location (country and/or sea)

text: metagenome

text: uncultured bacterium

text: Amazon soil 16S rDNA amplicons 1

text: uncultured bacterium

text: Pyrosequencing

text: soil

text: deforestation


ADG.E

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: NIOO KNAW

text: public

text: ADG.E

characteristic: depth

text: Replicate 'E' from deforested site 3

text: Amazon tropical rainforest

text: forest

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Brazil

text: metagenome

text: uncultured bacterium

characteristic: organism

text: Amazon soil 16S rDNA amplicons 1

characteristic: project name

text: uncultured bacterium

text: Pyrosequencing

characteristic: sequencing method

text: soil

text: deforestation

characteristic: title


FG.A

characteristic: External Id

text: NIOO KNAW

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: FG.A

text: Replicate 'A' from forest site 3

text: Amazon tropical rainforest

text: forest

text: soil

text: Brazil

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: uncultured bacterium

text: Amazon soil 16S rDNA amplicons 1

text: uncultured bacterium

text: Pyrosequencing

text: soil

characteristic: soil environmental package

text: forest


FG.C

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: NIOO KNAW

text: public

characteristic: SRA accession

text: FG.C

characteristic: Submitter Id

characteristic: collection date

characteristic: depth

text: Replicate 'C' from forest site 3

characteristic: description

text: Amazon tropical rainforest

characteristic: environment (biome)

text: forest

text: soil

text: Brazil

characteristic: geographic location (country and/or sea)

text: metagenome

text: uncultured bacterium

text: Amazon soil 16S rDNA amplicons 1

text: uncultured bacterium

text: Pyrosequencing

text: soil

text: forest


FG.E

characteristic: External Id

text: NIOO KNAW

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: FG.E

text: Replicate 'E' from forest site 3

text: Amazon tropical rainforest

text: forest

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Brazil

text: metagenome

text: uncultured bacterium

characteristic: organism

text: Amazon soil 16S rDNA amplicons 1

characteristic: project name

text: uncultured bacterium

text: Pyrosequencing

characteristic: sequencing method

text: soil

text: forest

characteristic: title


ADI.A

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: NIOO KNAW

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ADI.A

text: Replicate 'A' from deforested site 1

text: Amazon tropical rainforest

text: forest

text: soil

text: Brazil

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: uncultured bacterium

text: Amazon soil 16S rDNA amplicons 1

text: uncultured bacterium

text: Pyrosequencing

text: soil

characteristic: soil environmental package

text: deforestation


ADI.C

characteristic: External Id

text: NIOO KNAW

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ADI.C

characteristic: Submitter Id

characteristic: collection date

characteristic: depth

text: Replicate 'C' from deforested site 1

characteristic: description

text: Amazon tropical rainforest

characteristic: environment (biome)

text: forest

text: soil

text: Brazil

characteristic: geographic location (country and/or sea)

text: metagenome

text: uncultured bacterium

text: Amazon soil 16S rDNA amplicons 1

text: uncultured bacterium

text: Pyrosequencing

text: soil

text: deforestation


ADI.E

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: NIOO KNAW

text: public

characteristic: INSDC status

text: ADI.E

text: Replicate 'E' from deforested site 1

text: Amazon tropical rainforest

text: forest

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Brazil

text: metagenome

text: uncultured bacterium

characteristic: organism

text: Amazon soil 16S rDNA amplicons 1

characteristic: project name

text: uncultured bacterium

text: Pyrosequencing

characteristic: sequencing method

text: soil

text: deforestation

characteristic: title


FI.A

characteristic: External Id

text: NIOO KNAW

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: FI.A

text: Replicate 'A' from forest site 1

text: Amazon tropical rainforest

text: forest

text: soil

text: Brazil

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: uncultured bacterium

text: Amazon soil 16S rDNA amplicons 1

text: uncultured bacterium

text: Pyrosequencing

text: soil

characteristic: soil environmental package

text: forest


FI.C

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: NIOO KNAW

text: public

characteristic: INSDC status

text: FI.C

characteristic: Submitter Id

characteristic: collection date

characteristic: depth

text: Replicate 'C' from forest site 1

characteristic: description

text: Amazon tropical rainforest

characteristic: environment (biome)

text: forest

text: soil

text: Brazil

characteristic: geographic location (country and/or sea)

text: metagenome

text: uncultured bacterium

text: Amazon soil 16S rDNA amplicons 1

text: uncultured bacterium

text: Pyrosequencing

text: soil

text: forest


FI.E

characteristic: External Id

text: NIOO KNAW

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: FI.E

text: Replicate 'E' from forest site 1

text: Amazon tropical rainforest

text: forest

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Brazil

text: metagenome

text: uncultured bacterium

characteristic: organism

text: Amazon soil 16S rDNA amplicons 1

characteristic: project name

text: uncultured bacterium

text: Pyrosequencing

characteristic: sequencing method

text: soil

text: forest

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: NIOO KNAW

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Replicate 'A' from deforested site 2

text: Amazon tropical rainforest

text: forest

text: soil

text: Brazil

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: uncultured bacterium

text: Amazon soil 16S rDNA amplicons 1

text: uncultured bacterium

text: Pyrosequencing

text: soil

characteristic: soil environmental package

text: deforestation


characteristic: External Id

text: NIOO KNAW

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

characteristic: collection date

characteristic: depth

text: Replicate 'C' from deforested site 2

characteristic: description

text: Amazon tropical rainforest

characteristic: environment (biome)

text: forest

text: soil

text: Brazil

characteristic: geographic location (country and/or sea)

text: metagenome

text: uncultured bacterium

text: Amazon soil 16S rDNA amplicons 1

text: uncultured bacterium

text: Pyrosequencing

text: soil

text: deforestation


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: NIOO KNAW

text: public

characteristic: INSDC status

text: Replicate 'E' from deforested site 2

text: Amazon tropical rainforest

text: forest

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Brazil

text: metagenome

text: uncultured bacterium

characteristic: organism

text: Amazon soil 16S rDNA amplicons 1

characteristic: project name

text: uncultured bacterium

text: Pyrosequencing

characteristic: sequencing method

text: soil

text: deforestation

characteristic: title


characteristic: External Id

text: NIOO KNAW

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: Replicate 'A' from forest site 2

text: Amazon tropical rainforest

text: forest

text: soil

text: Brazil

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: uncultured bacterium

text: Amazon soil 16S rDNA amplicons 1

text: uncultured bacterium

text: Pyrosequencing

text: soil

characteristic: soil environmental package

text: forest


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: NIOO KNAW

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collection date

characteristic: depth

text: Replicate 'C' from forest site 2

characteristic: description

text: Amazon tropical rainforest

characteristic: environment (biome)

text: forest

text: soil

text: Brazil

characteristic: geographic location (country and/or sea)

text: metagenome

text: uncultured bacterium

text: Amazon soil 16S rDNA amplicons 1

text: uncultured bacterium

text: Pyrosequencing

text: soil

text: forest


characteristic: External Id

text: NIOO KNAW

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Replicate 'E' from forest site 2

text: Amazon tropical rainforest

text: forest

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Brazil

text: metagenome

text: uncultured bacterium

characteristic: organism

text: Amazon soil 16S rDNA amplicons 1

characteristic: project name

text: uncultured bacterium

text: Pyrosequencing

characteristic: sequencing method

text: soil

text: forest

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: DTU-GE

text: public

characteristic: INSDC status

characteristic: SRA accession

text: DTU-GE

characteristic: broker name

text: DANMAP

characteristic: collected by

text: Denmark

text: healthy

characteristic: host health state

text: Sus scrofa domesticus

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Faeces

characteristic: isolation source host associated

text: No

characteristic: note

text: Escherichia coli

text: Escherichia coli

characteristic: strain


characteristic: External Id

text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: DTU-GE

text: DANMAP

characteristic: collection date

text: Denmark

characteristic: geographic location (country and/or sea)

text: healthy

text: Sus scrofa domesticus

text: Yes

text: Faeces

text: No

text: Escherichia fergusonii

characteristic: organism

text: Escherichia fergusonii


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: DTU-GE

text: public

characteristic: INSDC status

characteristic: SRA accession

text: DTU-GE

characteristic: broker name

text: DANMAP

text: Denmark

text: healthy

text: Sus scrofa domesticus

text: Yes

text: Faeces

text: No

text: Enterococcus faecium

text: Enterococcus faecium


text: DTU-GE

text: public

text: DTU-GE

text: DANMAP

characteristic: collected by

text: Originally thought to be an E. faecium. Corrected on the 23rd of June 2015.

characteristic: description

text: Denmark

text: healthy

characteristic: host health state

text: Sus scrofa domesticus

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Faeces

characteristic: isolation source host associated

text: No

text: Enterococcus hirae

text: Enterococcus hirae

characteristic: title


characteristic: External Id

text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: DTU-GE

text: DANMAP

characteristic: collection date

text: Denmark

text: healthy

text: Sus scrofa domesticus

text: Yes

text: Faeces

text: No

characteristic: note

text: Enterococcus faecalis

text: Enterococcus faecalis

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF TARTU

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:UNIVERSITY OF TARTU

text: male 1

text: Human seminal fluid

characteristic: environment (biome)

text: Human seminal fluid

characteristic: environment (feature)

text: Human seminal fluid

characteristic: environment (material)

text: Estonia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-associated

characteristic: human associated environmental package

text: mimarks-survey

characteristic: investigation type

text: metagenome

characteristic: organism

characteristic: project name

text: metagenome

text: Illumina Hiseq2000

characteristic: sequencing method

text: TAKsample


characteristic: External Id

text: UNIVERSITY OF TARTU

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

characteristic: collection date

text: male 2

characteristic: description

text: Human seminal fluid

text: Human seminal fluid

text: Human seminal fluid

text: Estonia

text: human-associated

text: mimarks-survey

text: metagenome

text: metagenome

text: Illumina Hiseq2000

text: TAKsample

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF TARTU

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Human seminal fluid

characteristic: environment (biome)

text: Human seminal fluid

characteristic: environment (feature)

text: Human seminal fluid

characteristic: environment (material)

text: Estonia

text: human-associated

text: mimarks-survey

text: metagenome

text: metagenome

text: Illumina Hiseq2000

text: TAKsample


text: UNIVERSITY OF TARTU

text: public

text: male 6

text: Human seminovaginal samples

text: Human seminovaginal samples

text: Human seminovaginal samples

text: Estonia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-associated

characteristic: human associated environmental package

text: mimarks-survey

characteristic: investigation type

text: metagenome

characteristic: organism

characteristic: project name

text: metagenome

text: Illumina Hiseq2000

characteristic: sequencing method

text: TAKsample


characteristic: External Id

text: UNIVERSITY OF TARTU

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

characteristic: collection date

text: male 7

characteristic: description

text: Human seminal fluid

text: Human seminal fluid

text: Human seminal fluid

text: Estonia

text: human-associated

text: mimarks-survey

text: metagenome

text: metagenome

text: Illumina Hiseq2000

text: TAKsample

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF TARTU

text: public

characteristic: INSDC status

characteristic: SRA accession

text: male 8

text: Human seminal fluid

characteristic: environment (biome)

text: Human seminal fluid

characteristic: environment (feature)

text: Human seminal fluid

characteristic: environment (material)

text: Estonia

text: human-associated

text: mimarks-survey

text: metagenome

text: metagenome

text: Illumina Hiseq2000

text: TAKsample


text: UNIVERSITY OF TARTU

text: public

text: male 9

text: Human seminal fluid

text: Human seminal fluid

text: Human seminal fluid

text: Estonia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-associated

characteristic: human associated environmental package

text: mimarks-survey

characteristic: investigation type

text: metagenome

characteristic: organism

characteristic: project name

text: metagenome

text: Illumina Hiseq2000

characteristic: sequencing method

text: TAKsample


characteristic: External Id

text: UNIVERSITY OF TARTU

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

characteristic: collection date

text: male 12

characteristic: description

text: Human seminal fluid

text: Human seminal fluid

text: Human seminal fluid

text: Estonia

text: human-associated

text: mimarks-survey

text: metagenome

text: metagenome

text: Illumina Hiseq2000

text: TAKsample

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF TARTU

text: public

characteristic: INSDC status

characteristic: SRA accession

text: male 14

text: Human seminal fluid

characteristic: environment (biome)

text: Human seminal fluid

characteristic: environment (feature)

text: Human seminal fluid

characteristic: environment (material)

text: Estonia

text: human-associated

text: mimarks-survey

text: metagenome

text: metagenome

text: Illumina Hiseq2000

text: TAKsample


text: UNIVERSITY OF TARTU

text: public

text: male 15

text: Human seminal fluid

text: Human seminal fluid

text: Human seminal fluid

text: Estonia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-associated

characteristic: human associated environmental package

text: mimarks-survey

characteristic: investigation type

text: metagenome

characteristic: organism

characteristic: project name

text: metagenome

text: Illumina Hiseq2000

characteristic: sequencing method

text: TAKsample


characteristic: External Id

text: UNIVERSITY OF TARTU

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

characteristic: collection date

text: male 16

characteristic: description

text: Human seminal fluid

text: Human seminal fluid

text: Human seminal fluid

text: Estonia

text: human-associated

text: mimarks-survey

text: metagenome

text: metagenome

text: Illumina Hiseq2000

text: TAKsample

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF TARTU

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Human vaginal samples

characteristic: environment (biome)

text: Human vaginal samples

characteristic: environment (feature)

text: Human vaginal samples

characteristic: environment (material)

text: Estonia

text: human-associated

text: mimarks-survey

text: metagenome

text: metagenome

text: Illumina Hiseq2000

text: TAKsample


text: UNIVERSITY OF TARTU

text: public

text: Human vaginal samples

text: Human vaginal samples

text: Human vaginal samples

text: Estonia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-associated

characteristic: human associated environmental package

text: mimarks-survey

characteristic: investigation type

text: metagenome

characteristic: organism

characteristic: project name

text: metagenome

text: Illumina Hiseq2000

characteristic: sequencing method

text: TAKsample


characteristic: External Id

text: AALBORG UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:AALBORG UNIVERSITY

characteristic: Submitter Id

characteristic: collection date

text: wastewater treatment plant

text: wastewater treatment plant

text: activated sludge

text: Denmark

text: mimarks-survey

text: wastewater metagenome

text: MiDAS DNA extraction

text: wastewater metagenome

text: Illumina MiSeq

text: Activated Sludge V4-1 AAW V4 2012-10-31

characteristic: title

text: wastewater/sludge

characteristic: wastewater/sludge environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: AALBORG UNIVERSITY

text: public

characteristic: INSDC status

characteristic: SRA accession

text: wastewater treatment plant

characteristic: environment (biome)

text: wastewater treatment plant

characteristic: environment (feature)

text: activated sludge

characteristic: environment (material)

text: Denmark

text: mimarks-survey

text: wastewater metagenome

text: MiDAS DNA extraction

text: wastewater metagenome

text: Illumina MiSeq

text: Activated Sludge V4-2 AAW V4 2012-10-31

text: wastewater/sludge


text: AALBORG UNIVERSITY

text: public

text: wastewater treatment plant

text: wastewater treatment plant

text: activated sludge

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: wastewater metagenome

characteristic: organism

text: MiDAS DNA extraction

characteristic: project name

text: wastewater metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: Activated Sludge V4-3 AAW V4 2012-10-31

text: wastewater/sludge


characteristic: External Id

text: AALBORG UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

characteristic: collection date

text: wastewater treatment plant

text: wastewater treatment plant

text: activated sludge

text: Denmark

text: mimarks-survey

text: wastewater metagenome

text: MiDAS DNA extraction

text: wastewater metagenome

text: Illumina MiSeq

text: Activated Sludge V4-4 AAW V4 2012-10-31

characteristic: title

text: wastewater/sludge


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: AALBORG UNIVERSITY

text: public

characteristic: INSDC status

characteristic: SRA accession

text: wastewater treatment plant

characteristic: environment (biome)

text: wastewater treatment plant

text: activated sludge

text: Denmark

text: mimarks-survey

text: wastewater metagenome

text: MiDAS DNA extraction

text: wastewater metagenome

text: Illumina MiSeq

text: Activated Sludge V4-5 AAW V4 2012-10-31

text: wastewater/sludge

characteristic: wastewater/sludge environmental package


text: AALBORG UNIVERSITY

text: public

text: wastewater treatment plant

text: wastewater treatment plant

characteristic: environment (feature)

text: activated sludge

characteristic: environment (material)

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: wastewater metagenome

characteristic: organism

text: MiDAS DNA extraction

text: wastewater metagenome

text: Illumina MiSeq

text: Activated Sludge V4-6 AAW V4 2012-10-31

text: wastewater/sludge


characteristic: External Id

text: AALBORG UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: wastewater treatment plant

text: wastewater treatment plant

text: activated sludge

text: Denmark

text: mimarks-survey

text: wastewater metagenome

text: MiDAS DNA extraction

characteristic: project name

text: wastewater metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: Activated Sludge V4-7 AAW V4 2012-10-31

text: wastewater/sludge


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: AALBORG UNIVERSITY

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

text: wastewater treatment plant

text: wastewater treatment plant

text: activated sludge

text: Denmark

text: mimarks-survey

text: wastewater metagenome

text: MiDAS DNA extraction

text: wastewater metagenome

text: Illumina MiSeq

text: Activated Sludge V4-8 AAW V4 2012-10-31

characteristic: title

text: wastewater/sludge


text: AALBORG UNIVERSITY

text: public

text: wastewater treatment plant

characteristic: environment (biome)

text: wastewater treatment plant

characteristic: environment (feature)

text: activated sludge

characteristic: environment (material)

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

text: wastewater metagenome

text: MiDAS DNA extraction

text: wastewater metagenome

text: Illumina MiSeq

text: Activated Sludge V4-9 AAW V4 2012-10-31

text: wastewater/sludge

characteristic: wastewater/sludge environmental package


characteristic: External Id

text: AALBORG UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: wastewater treatment plant

text: wastewater treatment plant

text: activated sludge

text: Denmark

text: mimarks-survey

characteristic: investigation type

text: wastewater metagenome

characteristic: organism

text: MiDAS DNA extraction

text: wastewater metagenome

text: Illumina MiSeq

text: Activated Sludge V4-10 AAW V4 2012-10-31

text: wastewater/sludge


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: AALBORG UNIVERSITY

text: public

characteristic: INSDC status

characteristic: SRA accession

text: wastewater treatment plant

text: wastewater treatment plant

text: activated sludge

text: Denmark

text: mimarks-survey

text: wastewater metagenome

text: MiDAS DNA extraction

characteristic: project name

text: wastewater metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: Activated Sludge V4-11 AAW V4 2012-10-31

text: wastewater/sludge


text: AALBORG UNIVERSITY

text: public

characteristic: collection date

text: wastewater treatment plant

characteristic: environment (biome)

text: wastewater treatment plant

characteristic: environment (feature)

text: activated sludge

characteristic: environment (material)

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: mimarks-survey

text: wastewater metagenome

text: MiDAS DNA extraction

text: wastewater metagenome

text: Illumina MiSeq

text: Activated Sludge V4-12 AAW V4 2012-10-31

characteristic: title

text: wastewater/sludge


characteristic: External Id

text: AALBORG UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: wastewater treatment plant

text: wastewater treatment plant

text: activated sludge

text: Denmark

characteristic: geographic location (longitude)

text: mimarks-survey

text: wastewater metagenome

text: MiDAS DNA extraction

text: wastewater metagenome

text: Illumina MiSeq

text: Activated Sludge V4-13 AAW V4 2012-10-31

text: wastewater/sludge

characteristic: wastewater/sludge environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: AALBORG UNIVERSITY

text: public

characteristic: INSDC status

characteristic: SRA accession

text: wastewater treatment plant

text: wastewater treatment plant

text: activated sludge

text: Denmark

text: mimarks-survey

characteristic: investigation type

text: wastewater metagenome

characteristic: organism

text: MiDAS DNA extraction

text: wastewater metagenome

text: Illumina MiSeq

text: Activated Sludge V4-14 AAW V4 2012-10-31

text: wastewater/sludge


text: AALBORG UNIVERSITY

text: public

characteristic: collection date

text: wastewater treatment plant

characteristic: environment (biome)

text: wastewater treatment plant

characteristic: environment (feature)

text: activated sludge

characteristic: environment (material)

text: Denmark

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: wastewater metagenome

text: MiDAS DNA extraction

characteristic: project name

text: wastewater metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: Activated Sludge V4-15 AAW V4 2012-10-31

text: wastewater/sludge


characteristic: External Id

text: AALBORG UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: wastewater treatment plant

text: wastewater treatment plant

text: activated sludge

text: Denmark

characteristic: geographic location (latitude)

text: mimarks-survey

text: wastewater metagenome

text: MiDAS DNA extraction

text: wastewater metagenome

text: Illumina MiSeq

text: Activated Sludge V4-16 AAW V4 2012-10-31

characteristic: title

text: wastewater/sludge


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: AALBORG UNIVERSITY

text: public

characteristic: INSDC status

characteristic: SRA accession

text: wastewater treatment plant

text: wastewater treatment plant

text: activated sludge

text: Denmark

characteristic: geographic location (longitude)

text: mimarks-survey

text: wastewater metagenome

text: MiDAS DNA extraction

text: wastewater metagenome

text: Illumina MiSeq

text: Activated Sludge V4-17 AAW V4 2012-10-31

text: wastewater/sludge

characteristic: wastewater/sludge environmental package


text: AALBORG UNIVERSITY

text: public

characteristic: collection date

text: wastewater treatment plant

characteristic: environment (biome)

text: wastewater treatment plant

characteristic: environment (feature)

text: activated sludge

characteristic: environment (material)

text: Denmark

characteristic: geographic location (country and/or sea)

text: mimarks-survey

characteristic: investigation type

text: wastewater metagenome

characteristic: organism

text: MiDAS DNA extraction

text: wastewater metagenome

text: Illumina MiSeq

text: Activated Sludge V4-18 AAW V4 2012-10-31

text: wastewater/sludge


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