E-MTAB-4616:Sample 18

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Turner Group

text: public

text: E-MTAB-4616:Sample 18

text: ArrayExpress

text: Somatic cells

text: house mouse

text: embryonic day 9.5

characteristic: developmental stage

text: XY Male

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 18


E-MTAB-4616:Sample 180

status: PUBLIC

tag: attribute

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Turner Group

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-4616:Sample 180

tag: Namespace:Turner Group

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: germ cell

characteristic: cell type

text: house mouse

characteristic: common name

text: Protocols: Timed matings were undertaken, and noon on the date of the vaginal plug was taken to be E0.5. Embryos were subsequently harvested on the stipulated day. Germ cells (GFP-positive) and associated somatic cells (GFP-negative) were isolated separately from individual embryos using FACs sorting on the MoFLo XDP or FACS Aria platforms. Live cells, i.e. only those staining negative for propidium iodide, were collected, and typically purity checking on the GFP negative populations was >99%. RNA was isolated from FACs sorted purified cell populations using the Ambion PicoPure RNA isolation kit. Eluted RNA was used to obtain double-stranded-cDNA using the Clontech (SMARTER) Ultralow input RNA-Seq Kit according to the manufacturer’s protocol, or the Smart-Seq2 protocol. cDNA was normalized to 10ng in low-TE buffer and was sheared using Covaris S-series, and was cleaned up with Zymo DNA conc-5 and eluted in 12ul low TE. Libraries of ~300bp were generated 510 using Nugen Ovation® Ultralow DR (part No. 0330) with 15 PCR cycles.

characteristic: description

text: postnatal day 11

text: P11 XY Male

characteristic: genotype

text: Mus musculus

characteristic: organism

text: Mus musculus

characteristic: replicate

text: Mus musculus

text: Sample 180

characteristic: title

type: has member


E-MTAB-4616:Sample 181

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Turner Group

text: public

text: E-MTAB-4616:Sample 181

text: ArrayExpress

text: Somatic cells (gonadal)

text: house mouse

text: postnatal day 11

characteristic: developmental stage

text: P11 XY Male

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 181


E-MTAB-4616:Sample 182

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Turner Group

characteristic: INSDC center name

text: public

text: E-MTAB-4616:Sample 182

text: ArrayExpress

text: Somatic cells (gonadal)

text: house mouse

text: postnatal day 11

text: P11 XY Male

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 182


E-MTAB-4616:Sample 183

text: Turner Group

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-4616:Sample 183

text: ArrayExpress

text: Somatic cells (gonadal)

text: house mouse

text: postnatal day 11

text: P11 XY Male

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 183


E-MTAB-4616:Sample 184

text: Turner Group

text: public

characteristic: SRA accession

text: E-MTAB-4616:Sample 184

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: Somatic cells (gonadal)

text: house mouse

text: postnatal day 11

text: P11 XY Male

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 184


E-MTAB-4616:Sample 19

text: Turner Group

text: public

text: E-MTAB-4616:Sample 19

text: ArrayExpress

text: germ cell

characteristic: cell type

text: house mouse

characteristic: common name

characteristic: description

text: embryonic day 9.5

text: XX Female

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 19


E-MTAB-4616:Sample 2

text: Turner Group

text: public

text: E-MTAB-4616:Sample 2

text: ArrayExpress

text: epiblast cell

text: house mouse

text: embryonic day 6.5

text: XY Male

characteristic: genotype

text: Mus musculus

characteristic: organism

text: Mus musculus

characteristic: replicate

text: Mus musculus

text: Sample 2


E-MTAB-4616:Sample 20

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Turner Group

text: public

text: E-MTAB-4616:Sample 20

text: ArrayExpress

text: germ cell

text: house mouse

text: embryonic day 9.5

text: XX Female

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 20

characteristic: title


E-MTAB-4616:Sample 21

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Turner Group

text: public

text: E-MTAB-4616:Sample 21

text: ArrayExpress

text: Somatic cells

text: house mouse

text: embryonic day 9.5

characteristic: developmental stage

text: XX Female

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 21


E-MTAB-4616:Sample 22

text: Turner Group

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-4616:Sample 22

text: ArrayExpress

text: Somatic cells

text: house mouse

text: embryonic day 9.5

text: XX Female

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 22


E-MTAB-4616:Sample 23

text: Turner Group

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-4616:Sample 23

characteristic: Submitter Id

text: ArrayExpress

text: germ cell

text: house mouse

text: embryonic day 9.5

text: XX Male

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 23


E-MTAB-4616:Sample 24

text: Turner Group

text: public

text: E-MTAB-4616:Sample 24

text: ArrayExpress

characteristic: broker name

text: germ cell

characteristic: cell type

text: house mouse

characteristic: common name

text: embryonic day 9.5

text: XX Male

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 24


E-MTAB-4616:Sample 25

text: Turner Group

text: public

text: E-MTAB-4616:Sample 25

text: ArrayExpress

text: Somatic cells

text: house mouse

characteristic: description

text: embryonic day 9.5

text: XX Male

characteristic: genotype

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Mus musculus

text: Sample 25


E-MTAB-4616:Sample 26

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Turner Group

text: public

text: E-MTAB-4616:Sample 26

text: ArrayExpress

text: Somatic cells

text: house mouse

text: embryonic day 9.5

text: XX Male

text: Mus musculus

text: Mus musculus

characteristic: replicate

text: Mus musculus

text: Sample 26


E-MTAB-4616:Sample 27

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Turner Group

text: public

text: E-MTAB-4616:Sample 27

text: ArrayExpress

text: germ cell

text: house mouse

text: embryonic day 9.5

text: XO Female

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 27

characteristic: title


E-MTAB-4616:Sample 28

text: Turner Group

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-4616:Sample 28

text: ArrayExpress

text: germ cell

text: house mouse

text: embryonic day 9.5

characteristic: developmental stage

text: XO Female

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 28


E-MTAB-4616:Sample 29

text: Turner Group

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-4616:Sample 29

text: ArrayExpress

text: Somatic cells

text: house mouse

text: embryonic day 9.5

text: XO Female

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 29


E-MTAB-4616:Sample 3

text: Turner Group

text: public

text: E-MTAB-4616:Sample 3

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: epiblast cell

characteristic: cell type

text: house mouse

text: embryonic day 6.5

text: XY Male

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 3


E-MTAB-4616:Sample 30

text: Turner Group

text: public

text: E-MTAB-4616:Sample 30

text: ArrayExpress

text: Somatic cells

text: house mouse

characteristic: common name

characteristic: description

text: embryonic day 9.5

text: XO Female

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 30


E-MTAB-4616:Sample 31

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Turner Group

text: public

text: E-MTAB-4616:Sample 31

text: ArrayExpress

text: germ cell

text: house mouse

text: embryonic day 11.5

text: XY Male

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Mus musculus

text: Sample 31


E-MTAB-4616:Sample 32

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Turner Group

text: public

text: E-MTAB-4616:Sample 32

text: ArrayExpress

text: germ cell

text: house mouse

text: embryonic day 11.5

text: XY Male

text: Mus musculus

text: Mus musculus

characteristic: replicate

text: Mus musculus

text: Sample 32


E-MTAB-4616:Sample 33

text: Turner Group

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-4616:Sample 33

text: ArrayExpress

text: Somatic cells (gonadal)

text: house mouse

text: embryonic day 11.5

text: XY Male

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 33

characteristic: title


E-MTAB-4616:Sample 34

text: Turner Group

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-4616:Sample 34

text: ArrayExpress

text: Somatic cells (gonadal)

text: house mouse

text: embryonic day 11.5

characteristic: developmental stage

text: XY Male

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 34


E-MTAB-4616:Sample 35

text: Turner Group

text: public

characteristic: SRA accession

text: E-MTAB-4616:Sample 35

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: germ cell

text: house mouse

text: embryonic day 11.5

text: XX Female

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 35


E-MTAB-4616:Sample 36

text: Turner Group

text: public

text: E-MTAB-4616:Sample 36

text: ArrayExpress

text: germ cell

characteristic: cell type

text: house mouse

characteristic: common name

characteristic: description

text: embryonic day 11.5

text: XX Female

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 36


E-MTAB-4616:Sample 37

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Turner Group

text: public

text: E-MTAB-4616:Sample 37

text: ArrayExpress

text: germ cell

text: house mouse

text: embryonic day 11.5

text: XX Female

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 37


E-MTAB-4616:Sample 38

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Turner Group

text: public

text: E-MTAB-4616:Sample 38

text: ArrayExpress

text: germ cell

text: house mouse

text: embryonic day 11.5

text: XX Female

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Mus musculus

text: Sample 38


E-MTAB-4616:Sample 39

text: Turner Group

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-4616:Sample 39

text: ArrayExpress

text: Somatic cells (gonadal)

text: house mouse

text: embryonic day 11.5

text: XX Female

text: Mus musculus

text: Mus musculus

characteristic: replicate

text: Mus musculus

text: Sample 39


E-MTAB-4616:Sample 4

text: Turner Group

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-4616:Sample 4

text: ArrayExpress

text: epiblast cell

text: house mouse

text: embryonic day 6.5

text: XY Male

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 4

characteristic: title


E-MTAB-4616:Sample 40

text: Turner Group

text: public

characteristic: SRA accession

text: E-MTAB-4616:Sample 40

characteristic: Submitter Id

text: ArrayExpress

text: Somatic cells (gonadal)

text: house mouse

text: embryonic day 11.5

characteristic: developmental stage

text: XX Female

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 40


E-MTAB-4616:Sample 41

text: Turner Group

text: public

text: E-MTAB-4616:Sample 41

text: ArrayExpress

characteristic: broker name

text: Somatic cells (gonadal)

characteristic: cell type

text: house mouse

characteristic: common name

text: embryonic day 11.5

text: XX Female

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 41


E-MTAB-4616:Sample 42

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Turner Group

text: public

text: E-MTAB-4616:Sample 42

text: ArrayExpress

text: Somatic cells (gonadal)

text: house mouse

characteristic: description

text: embryonic day 11.5

text: XX Female

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 42


E-MTAB-4616:Sample 43

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Turner Group

text: public

text: E-MTAB-4616:Sample 43

text: ArrayExpress

text: germ cell

text: house mouse

text: embryonic day 11.5

text: XX Male

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 43


E-MTAB-4616:Sample 44

text: Turner Group

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-4616:Sample 44

text: ArrayExpress

text: germ cell

text: house mouse

text: embryonic day 11.5

text: XX Male

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Mus musculus

text: Sample 44


E-MTAB-4616:Sample 45

text: Turner Group

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-4616:Sample 45

text: ArrayExpress

text: Somatic cells (gonadal)

text: house mouse

text: embryonic day 11.5

text: XX Male

text: Mus musculus

text: Mus musculus

characteristic: replicate

text: Mus musculus

text: Sample 45


E-MTAB-4616:Sample 46

text: Turner Group

text: public

characteristic: SRA accession

text: E-MTAB-4616:Sample 46

characteristic: Submitter Id

text: ArrayExpress

text: Somatic cells (gonadal)

text: house mouse

text: embryonic day 11.5

text: XX Male

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 46

characteristic: title


E-MTAB-4616:Sample 47

text: Turner Group

text: public

text: E-MTAB-4616:Sample 47

text: ArrayExpress

characteristic: broker name

text: germ cell

characteristic: cell type

text: house mouse

text: embryonic day 12.5

characteristic: developmental stage

text: XY Male

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 47


E-MTAB-4616:Sample 48

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Turner Group

text: public

text: E-MTAB-4616:Sample 48

text: ArrayExpress

text: germ cell

text: house mouse

characteristic: common name

text: embryonic day 12.5

text: XY Male

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 48


E-MTAB-4616:Sample 49

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Turner Group

text: public

text: E-MTAB-4616:Sample 49

text: ArrayExpress

text: germ cell

text: house mouse

characteristic: description

text: embryonic day 12.5

text: XY Male

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 49


E-MTAB-4616:Sample 5

text: Turner Group

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-4616:Sample 5

text: ArrayExpress

text: epiblast cell

text: house mouse

text: embryonic day 6.5

text: XY Male

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 5


E-MTAB-4616:Sample 50

text: Turner Group

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-4616:Sample 50

text: ArrayExpress

text: germ cell

text: house mouse

text: embryonic day 12.5

text: XY Male

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Mus musculus

text: Sample 50


E-MTAB-4616:Sample 51

text: Turner Group

text: public

characteristic: SRA accession

text: E-MTAB-4616:Sample 51

characteristic: Submitter Id

text: ArrayExpress

text: germ cell

text: house mouse

text: embryonic day 12.5

text: XY Male

text: Mus musculus

text: Mus musculus

characteristic: replicate

text: Mus musculus

text: Sample 51


E-MTAB-4616:Sample 52

text: Turner Group

text: public

text: E-MTAB-4616:Sample 52

text: ArrayExpress

characteristic: broker name

text: germ cell

characteristic: cell type

text: house mouse

text: embryonic day 12.5

text: XY Male

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 52

characteristic: title


E-MTAB-4616:Sample 53

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Turner Group

text: public

text: E-MTAB-4616:Sample 53

text: ArrayExpress

text: Somatic cells (gonadal)

text: house mouse

text: embryonic day 12.5

characteristic: developmental stage

text: XY Male

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 53


E-MTAB-4616:Sample 54

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Turner Group

text: public

text: E-MTAB-4616:Sample 54

text: ArrayExpress

text: Somatic cells (gonadal)

text: house mouse

characteristic: common name

text: embryonic day 12.5

text: XY Male

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 54


E-MTAB-4616:Sample 55

text: Turner Group

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-4616:Sample 55

text: ArrayExpress

text: Somatic cells (gonadal)

text: house mouse

characteristic: description

text: embryonic day 12.5

text: XY Male

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 55


E-MTAB-4616:Sample 56

text: Turner Group

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-4616:Sample 56

text: ArrayExpress

text: Somatic cells (gonadal)

text: house mouse

text: embryonic day 12.5

text: XY Male

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 56


E-MTAB-4616:Sample 57

text: Turner Group

text: public

characteristic: SRA accession

text: E-MTAB-4616:Sample 57

characteristic: Submitter Id

text: ArrayExpress

text: Somatic cells (gonadal)

text: house mouse

text: embryonic day 12.5

text: XY Male

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Mus musculus

text: Sample 57


E-MTAB-4616:Sample 58

text: Turner Group

text: public

text: E-MTAB-4616:Sample 58

text: ArrayExpress

characteristic: broker name

text: Somatic cells (gonadal)

characteristic: cell type

text: house mouse

text: embryonic day 12.5

text: XY Male

text: Mus musculus

text: Mus musculus

characteristic: replicate

text: Mus musculus

text: Sample 58


E-MTAB-4616:Sample 59

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Turner Group

text: public

text: E-MTAB-4616:Sample 59

text: ArrayExpress

text: Somatic cells (gonadal)

text: house mouse

text: embryonic day 12.5

text: XY Male

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 59

characteristic: title


E-MTAB-4616:Sample 6

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Turner Group

text: public

text: E-MTAB-4616:Sample 6

text: ArrayExpress

text: epiblast cell

text: house mouse

text: embryonic day 6.5

characteristic: developmental stage

text: XY Male

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 6


E-MTAB-4616:Sample 60

text: Turner Group

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-4616:Sample 60

text: ArrayExpress

text: germ cell

text: house mouse

characteristic: common name

text: embryonic day 12.5

text: XX Female

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 60


E-MTAB-4616:Sample 61

text: Turner Group

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-4616:Sample 61

text: ArrayExpress

text: germ cell

text: house mouse

characteristic: description

text: embryonic day 12.5

text: XX Female

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 61


E-MTAB-4616:Sample 62

text: Turner Group

text: public

characteristic: SRA accession

text: E-MTAB-4616:Sample 62

characteristic: Submitter Id

text: ArrayExpress

text: germ cell

text: house mouse

text: embryonic day 12.5

text: XX Female

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 62


E-MTAB-4616:Sample 63

text: Turner Group

text: public

text: E-MTAB-4616:Sample 63

text: ArrayExpress

characteristic: broker name

text: germ cell

characteristic: cell type

text: house mouse

text: embryonic day 12.5

text: XX Female

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Mus musculus

text: Sample 63


E-MTAB-4616:Sample 64

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Turner Group

text: public

text: E-MTAB-4616:Sample 64

text: ArrayExpress

text: Somatic cells (gonadal)

text: house mouse

text: embryonic day 12.5

text: XX Female

text: Mus musculus

text: Mus musculus

characteristic: replicate

text: Mus musculus

text: Sample 64


E-MTAB-4616:Sample 65

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Turner Group

text: public

text: E-MTAB-4616:Sample 65

text: ArrayExpress

text: Somatic cells (gonadal)

text: house mouse

text: embryonic day 12.5

text: XX Female

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 65

characteristic: title


E-MTAB-4616:Sample 66

text: Turner Group

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-4616:Sample 66

text: ArrayExpress

text: Somatic cells (gonadal)

text: house mouse

text: embryonic day 12.5

characteristic: developmental stage

text: XX Female

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 66


E-MTAB-4616:Sample 67

text: Turner Group

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-4616:Sample 67

text: ArrayExpress

text: Somatic cells (gonadal)

text: house mouse

characteristic: common name

text: embryonic day 12.5

text: XX Female

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 67


E-MTAB-4616:Sample 68

text: Turner Group

text: public

characteristic: SRA accession

text: E-MTAB-4616:Sample 68

characteristic: Submitter Id

text: ArrayExpress

text: germ cell

text: house mouse

characteristic: description

text: embryonic day 12.5

text: XX Male

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 68


E-MTAB-4616:Sample 69

text: Turner Group

text: public

text: E-MTAB-4616:Sample 69

text: ArrayExpress

characteristic: broker name

text: germ cell

characteristic: cell type

text: house mouse

text: embryonic day 12.5

text: XX Male

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 69


E-MTAB-4616:Sample 7

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Turner Group

text: public

text: E-MTAB-4616:Sample 7

text: ArrayExpress

text: epiblast cell

text: house mouse

text: embryonic day 6.5

text: XX Female

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Mus musculus

text: Sample 7


E-MTAB-4616:Sample 70

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Turner Group

text: public

text: E-MTAB-4616:Sample 70

text: ArrayExpress

text: Somatic cells (gonadal)

text: house mouse

text: embryonic day 12.5

text: XX Male

text: Mus musculus

text: Mus musculus

characteristic: replicate

text: Mus musculus

text: Sample 70


E-MTAB-4616:Sample 71

text: Turner Group

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-4616:Sample 71

text: ArrayExpress

text: Somatic cells (gonadal)

text: house mouse

text: embryonic day 12.5

text: XX Male

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 71

characteristic: title


E-MTAB-4616:Sample 72

text: Turner Group

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-4616:Sample 72

text: ArrayExpress

text: Somatic cells (gonadal)

text: house mouse

text: embryonic day 12.5

characteristic: developmental stage

text: XX Male

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 72


E-MTAB-4616:Sample 73

text: Turner Group

text: public

characteristic: SRA accession

text: E-MTAB-4616:Sample 73

characteristic: Submitter Id

text: ArrayExpress

text: germ cell

text: house mouse

characteristic: common name

text: embryonic day 14.5

text: XY Male

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 73


E-MTAB-4616:Sample 74

text: Turner Group

text: public

text: E-MTAB-4616:Sample 74

text: ArrayExpress

characteristic: broker name

text: germ cell

characteristic: cell type

text: house mouse

characteristic: description

text: embryonic day 14.5

text: XY Male

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 74


E-MTAB-4616:Sample 75

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Turner Group

text: public

text: E-MTAB-4616:Sample 75

text: ArrayExpress

text: germ cell

text: house mouse

text: embryonic day 14.5

text: XY Male

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 75


E-MTAB-4616:Sample 76

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Turner Group

text: public

text: E-MTAB-4616:Sample 76

text: ArrayExpress

text: Somatic cells (gonadal)

text: house mouse

text: embryonic day 14.5

text: XY Male

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Mus musculus

text: Sample 76


E-MTAB-4616:Sample 77

text: Turner Group

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-4616:Sample 77

text: ArrayExpress

text: Somatic cells (gonadal)

text: house mouse

text: embryonic day 14.5

text: XY Male

text: Mus musculus

text: Mus musculus

characteristic: replicate

text: Mus musculus

text: Sample 77


E-MTAB-4616:Sample 78

text: Turner Group

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-4616:Sample 78

text: ArrayExpress

text: Somatic cells (gonadal)

text: house mouse

text: embryonic day 14.5

text: XY Male

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 78

characteristic: title


E-MTAB-4616:Sample 79

text: Turner Group

text: public

characteristic: SRA accession

text: E-MTAB-4616:Sample 79

characteristic: Submitter Id

text: ArrayExpress

text: germ cell

text: house mouse

text: embryonic day 14.5

characteristic: developmental stage

text: XX Female

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 79


E-MTAB-4616:Sample 8

text: Turner Group

text: public

text: E-MTAB-4616:Sample 8

text: ArrayExpress

characteristic: broker name

text: epiblast cell

characteristic: cell type

text: house mouse

characteristic: common name

text: embryonic day 6.5

text: XX Female

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 8


E-MTAB-4616:Sample 80

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Turner Group

text: public

text: E-MTAB-4616:Sample 80

text: ArrayExpress

text: germ cell

text: house mouse

characteristic: description

text: embryonic day 14.5

text: XX Female

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 80


E-MTAB-4616:Sample 81

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Turner Group

text: public

text: E-MTAB-4616:Sample 81

text: ArrayExpress

text: germ cell

text: house mouse

text: embryonic day 14.5

text: XX Female

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 81


E-MTAB-4616:Sample 82

text: Turner Group

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-4616:Sample 82

text: ArrayExpress

text: germ cell

text: house mouse

text: embryonic day 14.5

text: XX Female

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Mus musculus

text: Sample 82


E-MTAB-4616:Sample 83

text: Turner Group

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-4616:Sample 83

text: ArrayExpress

text: germ cell

text: house mouse

text: embryonic day 14.5

text: XX Female

text: Mus musculus

text: Mus musculus

characteristic: replicate

text: Mus musculus

text: Sample 83


E-MTAB-4616:Sample 84

text: Turner Group

text: public

characteristic: SRA accession

text: E-MTAB-4616:Sample 84

characteristic: Submitter Id

text: ArrayExpress

text: Somatic cells (gonadal)

text: house mouse

text: embryonic day 14.5

text: XX Female

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 84

characteristic: title


E-MTAB-4616:Sample 85

text: Turner Group

text: public

text: E-MTAB-4616:Sample 85

text: ArrayExpress

characteristic: broker name

text: Somatic cells (gonadal)

characteristic: cell type

text: house mouse

text: embryonic day 14.5

characteristic: developmental stage

text: XX Female

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 85


E-MTAB-4616:Sample 86

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Turner Group

text: public

text: E-MTAB-4616:Sample 86

text: ArrayExpress

text: Somatic cells (gonadal)

text: house mouse

characteristic: common name

text: embryonic day 14.5

text: XX Female

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 86


E-MTAB-4616:Sample 87

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Turner Group

text: public

text: E-MTAB-4616:Sample 87

text: ArrayExpress

text: Somatic cells (gonadal)

text: house mouse

characteristic: description

text: embryonic day 14.5

text: XX Female

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 87


E-MTAB-4616:Sample 88

text: Turner Group

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-4616:Sample 88

text: ArrayExpress

text: Somatic cells (gonadal)

text: house mouse

text: embryonic day 14.5

text: XX Female

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 88


E-MTAB-4616:Sample 89

text: Turner Group

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-4616:Sample 89

text: ArrayExpress

text: germ cell

text: house mouse

text: embryonic day 14.5

text: XX Male

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Mus musculus

text: Sample 89


E-MTAB-4616:Sample 9

text: Turner Group

text: public

characteristic: SRA accession

text: E-MTAB-4616:Sample 9

characteristic: Submitter Id

text: ArrayExpress

text: epiblast cell

text: house mouse

text: embryonic day 6.5

text: XX Female

text: Mus musculus

text: Mus musculus

characteristic: replicate

text: Mus musculus

text: Sample 9


E-MTAB-4616:Sample 90

text: Turner Group

text: public

text: E-MTAB-4616:Sample 90

text: ArrayExpress

characteristic: broker name

text: germ cell

characteristic: cell type

text: house mouse

text: embryonic day 14.5

text: XX Male

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 90

characteristic: title


E-MTAB-4616:Sample 91

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Turner Group

text: public

text: E-MTAB-4616:Sample 91

text: ArrayExpress

text: germ cell

text: house mouse

text: embryonic day 14.5

characteristic: developmental stage

text: XX Male

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 91


E-MTAB-4616:Sample 92

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Turner Group

text: public

text: E-MTAB-4616:Sample 92

text: ArrayExpress

text: germ cell

text: house mouse

characteristic: common name

text: embryonic day 14.5

text: XX Male

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 92


E-MTAB-4616:Sample 93

text: Turner Group

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-4616:Sample 93

text: ArrayExpress

text: Somatic cells (gonadal)

text: house mouse

characteristic: description

text: embryonic day 14.5

text: XX Male

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 93


E-MTAB-4616:Sample 94

text: Turner Group

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-4616:Sample 94

text: ArrayExpress

text: Somatic cells (gonadal)

text: house mouse

text: embryonic day 14.5

text: XX Male

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 94


E-MTAB-4616:Sample 95

text: Turner Group

text: public

characteristic: SRA accession

text: E-MTAB-4616:Sample 95

characteristic: Submitter Id

text: ArrayExpress

text: Somatic cells (gonadal)

text: house mouse

text: embryonic day 14.5

text: XX Male

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Mus musculus

text: Sample 95


E-MTAB-4616:Sample 96

text: Turner Group

text: public

text: E-MTAB-4616:Sample 96

text: ArrayExpress

characteristic: broker name

text: Somatic cells (gonadal)

characteristic: cell type

text: house mouse

text: embryonic day 14.5

text: XX Male

text: Mus musculus

text: Mus musculus

characteristic: replicate

text: Mus musculus

text: Sample 96


E-MTAB-4616:Sample 97

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Turner Group

text: public

text: E-MTAB-4616:Sample 97

text: ArrayExpress

text: germ cell

text: house mouse

text: embryonic day 14.5

text: XO Female

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 97

characteristic: title


E-MTAB-4616:Sample 98

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Turner Group

text: public

text: E-MTAB-4616:Sample 98

text: ArrayExpress

text: germ cell

text: house mouse

text: embryonic day 14.5

characteristic: developmental stage

text: XO Female

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 98


E-MTAB-4616:Sample 99

text: Turner Group

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-4616:Sample 99

text: ArrayExpress

text: Somatic cells (gonadal)

text: house mouse

characteristic: common name

text: embryonic day 14.5

text: XO Female

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 99


text: The University of Leeds

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:The University of Leeds

text: human

text: Homo sapiens

text: Homo sapiens

text: Female

characteristic: sex


text: OX

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: description

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

characteristic: broker name

text: Neisseria cinerea

characteristic: organism

text: Neisseria cinerea


text: 29553330; 30687793; 32375989; 33770146

characteristic: ENA-CHECKLIST

text: OX

text: public

text: GBR

text: Neisseria

characteristic: genus

characteristic: isolate

text: Neisseria meningitidis

text: Neisseria meningitidis

type: AMR curated data - CABBAGE

value: penicillin

value: susceptible

value: Neisseria meningitidis

value: rifampin

value: cefotaxime

value: chloramphenicol

value: ciprofloxacin


text: 29553330; 30687793; 32375989; 33770146; 34662348

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: OX

text: public

text: GBR

text: Neisseria

text: Neisseria meningitidis

text: Neisseria meningitidis

characteristic: title


characteristic: External Id

text: OX

characteristic: INSDC center name

text: public

text: GBR

text: Neisseria

text: Neisseria meningitidis

text: Neisseria meningitidis


text: 29553330; 30687793; 32375989; 33770146

text: OX

characteristic: INSDC first public

text: public

text: GBR

text: Neisseria

text: Neisseria meningitidis

text: Neisseria meningitidis


text: 29553330; 30687793; 32375989; 33770146

text: OX

characteristic: INSDC last update

text: public

text: GBR

text: Neisseria

text: Neisseria meningitidis

text: Neisseria meningitidis


text: 29553330; 30687793; 32375989; 33770146

text: OX

text: public

characteristic: INSDC status

text: GBR

text: Neisseria

text: Neisseria meningitidis

text: Neisseria meningitidis


text: 29553330; 30687793; 32375989; 33770146

text: OX

text: public

text: GBR

text: Neisseria

text: Neisseria meningitidis

text: Neisseria meningitidis


text: 29553330; 30687793; 32375989; 33770146

text: OX

text: public

text: GBR

text: Neisseria

text: Neisseria meningitidis

text: Neisseria meningitidis


text: 29553330; 30687793; 32375989; 33770146

text: OX

text: public

text: GBR

text: Neisseria

text: Neisseria meningitidis

text: Neisseria meningitidis


text: 29553330; 30687793; 32375989; 33770146

text: OX

text: public

text: GBR

text: Neisseria

text: Neisseria meningitidis

text: Neisseria meningitidis


text: 29553330; 30687793; 32375989; 33770146

text: OX

text: public

text: GBR

text: Neisseria

text: Neisseria meningitidis

text: Neisseria meningitidis


text: 29553330; 30687793; 32375989; 33770146

text: OX

text: public

text: GBR

text: Neisseria

text: Neisseria meningitidis

text: Neisseria meningitidis


text: 29553330; 30687793; 32375989; 33770146

text: OX

text: public

text: GBR

text: Neisseria

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: GBR

text: Neisseria

text: Neisseria meningitidis

text: Neisseria meningitidis


text: 29553330; 30687793; 32375989; 33770146

text: OX

text: public

text: GBR

text: Neisseria

text: Neisseria meningitidis

text: Neisseria meningitidis


text: 29553330; 30687793; 32375989; 33770146

text: OX

text: public

text: GBR

text: Neisseria

text: Neisseria meningitidis

text: Neisseria meningitidis


text: 29553330; 30687793; 32375989; 33770146

text: OX

text: public

text: GBR

text: Neisseria

text: Neisseria meningitidis

text: Neisseria meningitidis


text: 29553330; 30687793; 32375989; 33770146

text: OX

text: public

text: GBR

text: Neisseria

text: Neisseria meningitidis

text: Neisseria meningitidis


text: 29553330; 30687793; 32375989; 33770146

text: OX

text: public

text: GBR

text: Neisseria

text: Neisseria meningitidis

text: Neisseria meningitidis


text: 29553330; 30687793; 32375989; 33770146

text: OX

text: public

text: GBR

text: Neisseria

text: Neisseria meningitidis

text: Neisseria meningitidis


text: 29553330; 30687793; 32375989; 33770146

text: OX

text: public

text: GBR

text: Neisseria

text: Neisseria meningitidis

text: Neisseria meningitidis

value: resistant


text: OX

text: public

text: GBR

text: Neisseria

text: Neisseria meningitidis

text: Neisseria meningitidis


text: 29553330; 30687793; 32375989; 33770146

text: OX

text: public

text: GBR

text: Neisseria

text: Neisseria meningitidis

text: Neisseria meningitidis


text: 29553330; 30687793; 32375989; 33770146

text: OX

text: public

text: GBR

text: Neisseria

text: Neisseria meningitidis

text: Neisseria meningitidis


text: 29553330; 30687793; 32375989; 33770146

text: OX

text: public

text: GBR

text: Neisseria

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: GBR

text: Neisseria

text: Neisseria meningitidis

text: Neisseria meningitidis


text: 29553330; 30687793; 32375989; 33770146

text: OX

text: public

text: GBR

text: Neisseria

text: Neisseria meningitidis

text: Neisseria meningitidis


text: 29553330; 30687793; 32375989; 33770146

text: OX

text: public

text: GBR

text: Neisseria

text: Neisseria meningitidis

text: Neisseria meningitidis


text: 29553330; 30687793; 32375989; 33770146

text: OX

text: public

text: GBR

text: Neisseria

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: GBR

text: Neisseria

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: GBR

text: Neisseria

text: Neisseria meningitidis

text: Neisseria meningitidis


text: 29553330; 30687793; 32375989; 33770146

text: OX

text: public

text: GBR

text: Neisseria

text: Neisseria meningitidis

text: Neisseria meningitidis


text: 29553330; 30687793; 32375989; 33770146

text: OX

text: public

text: GBR

text: Neisseria

text: Neisseria meningitidis

text: Neisseria meningitidis


text: 29553330; 30687793; 32375989; 33770146

text: OX

text: public

text: GBR

text: Neisseria

text: Neisseria meningitidis

text: Neisseria meningitidis


text: 29553330; 30687793; 32375989; 34662348

text: OX

text: public

text: GBR

text: Neisseria

text: Neisseria meningitidis

text: Neisseria meningitidis


text: OX

text: public

text: Neisseria cinerea

text: Neisseria cinerea


text: OX

text: public

text: Neisseria polysaccharea

text: Neisseria polysaccharea


text: OX

text: public

text: Neisseria lactamica

text: Neisseria lactamica


text: 29553330; 30687793; 32375989

text: OX

text: public

text: GBR

text: Neisseria

text: Neisseria meningitidis

text: Neisseria meningitidis


text: public

text: E-MTAB-4642:TAP191_6h_1_9104_ATCACG_read1.fastq

tag: Namespace:EMBL/CRG Systems Biology Research Unit, Centre for Genomic Regulation (CRG)

text: ArrayExpress

text: Protocols: Cells were grown in modified Hayflick medium miRNeasy kit from Qiagen (in column DNase) Strand-specific RNA-seq library, the TruSeq Stranded mRNA Sample Prep Kit v2 (Illumina)

characteristic: genotype

text: 6 hours growth

characteristic: growth condition

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: EMBL/CRG Systems Biology Research Unit, Centre for Genomic Regulation (CRG)

text: public

characteristic: SRA accession

text: E-MTAB-4642:TAP191_6h_2_9105_CGATGT_read1.fastq

characteristic: Submitter Id

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TAP516_6h_1_9106_TTAGGC_read1.fastq

text: ArrayExpress

characteristic: broker name

characteristic: description

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


characteristic: ENA-CHECKLIST

text: public

text: E-MTAB-4642:TAP516_6h_2_9107_TGACCA_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

characteristic: organism

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF11_6h_1_9108_ACAGTG_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF11_6h_2_9109_GCCAAT_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF14_6h_1_9110_CAGATC_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF14_6h_2_9111_ACTTGA_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF167_6h_1_9371_ATCACG_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF167_6h_2_9372_CGATGT_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF171_6h_1_9116_AGTCAA_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF171_6h_2_9117_AGTTCC_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF175_6h_1_9118_ATGTCA_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF175_6h_2_9119_CCGTCC_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF178_6h_1_9120_GTCCGC_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF178_6h_2_9121_GTGAAA_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF185_6h_1_9122_GTGGCC_read1.fastq

text: ArrayExpress

text: Protocols: Cells were grown in modified Hayflick medium miRNeasy kit from Qiagen (in column DNase) Strand-specific RNA-seq library, the TruSeq Stranded mRNA Sample Prep Kit v2 (Illumina)

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: EMBL/CRG Systems Biology Research Unit, Centre for Genomic Regulation (CRG)

text: public

text: E-MTAB-4642:TF185_6h_2_9123_GTTTCG_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF188_6h_1_9124_CGTACG_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF188_6h_2_9125_GAGTGG_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF197_6h_1_9126_ACTGAT_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF197_6h_2_9127_ATTCCT_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF199_6h_1_9128_CAGATC_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF199_6h_2_9129_ACTTGA_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF200_6h_1_9130_GATCAG_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF200_6h_2_9131_TAGCTT_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF201_6h_1_9132_GGCTAC_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF201_6h_2_9133_CTTGTA_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF202_6h_1_9134_AGTCAA_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF202_6h_2_9135_AGTTCC_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF203_6h_1_9136_ATGTCA_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF203_6h_2_9137_CCGTCC_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF204_6h_1_9138_GTCCGC_read1.fastq

text: ArrayExpress

text: Protocols: Cells were grown in modified Hayflick medium miRNeasy kit from Qiagen (in column DNase) Strand-specific RNA-seq library, the TruSeq Stranded mRNA Sample Prep Kit v2 (Illumina)

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: EMBL/CRG Systems Biology Research Unit, Centre for Genomic Regulation (CRG)

text: public

text: E-MTAB-4642:TF204_6h_2_9139_GTGAAA_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF205_6h_1_9140_GTGGCC_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF205_6h_2_9141_GTTTCG_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF206_6h_1_9142_CGTACG_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF206_6h_2_9143_GAGTGG_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF207_6h_1_9144_ACTGAT_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF207_6h_2_9145_ATTCCT_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF208_6h_1_9146_ATCACG_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF208_6h_2_9147_CGATGT_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF209_6h_1_9148_TTAGGC_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF209_6h_2_9149_TGACCA_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF210_6h_1_9150_ACAGTG_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF210_6h_2_9151_GCCAAT_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF211_6h_1_9261_CAGATC_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF211_6h_2_9262_ACTTGA_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF212_6h_1_9263_GATCAG_read1.fastq

text: ArrayExpress

text: Protocols: Cells were grown in modified Hayflick medium miRNeasy kit from Qiagen (in column DNase) Strand-specific RNA-seq library, the TruSeq Stranded mRNA Sample Prep Kit v2 (Illumina)

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: EMBL/CRG Systems Biology Research Unit, Centre for Genomic Regulation (CRG)

text: public

text: E-MTAB-4642:TF212_6h_2_9264_TAGCTT_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF214_6h_1_9265_GGCTAC_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF214_6h_2_9266_CTTGTA_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF221_6h_1_9267_AGTCAA_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF221_6h_2_9268_AGTTCC_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF222_6h_1_9269_ATGTCA_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF222_6h_2_9270_CCGTCC_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF223_6h_1_9373_TTAGGC_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF223_6h_2_9374_TGACCA_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF224_6h_1_9271_GTCCGC_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF224_6h_2_9272_GTGAAA_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF225_6h_1_9322_ATCACG_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF225_6h_2_9323_CGATGT_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF226_6h_1_9324_TTAGGC_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF226_6h_2_9325_TGACCA_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF227_6h_1_9326_ACAGTG_read1.fastq

text: ArrayExpress

text: Protocols: Cells were grown in modified Hayflick medium miRNeasy kit from Qiagen (in column DNase) Strand-specific RNA-seq library, the TruSeq Stranded mRNA Sample Prep Kit v2 (Illumina)

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: EMBL/CRG Systems Biology Research Unit, Centre for Genomic Regulation (CRG)

text: public

text: E-MTAB-4642:TF227_6h_2_9327_GCCAAT_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF229_6h_1_9328_CAGATC_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF229_6h_2_9329_ACTTGA_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF230_6h_1_9330_GATCAG_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF230_6h_2_9331_TAGCTT_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF232_6h_1_9332_GGCTAC_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF232_6h_2_9333_CTTGTA_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF233_6h_1_9334_AGTCAA_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF233_6h_2_9335_AGTTCC_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF234_6h_1_9336_ATGTCA_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF234_6h_2_9337_CCGTCC_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF235_6h_1_9338_GTCCGC_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF235_6h_2_9339_GTGAAA_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF236_6h_1_9340_GTGGCC_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF236_6h_2_9341_GTTTCG_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF237_6h_1_9342_CGTACG_read1.fastq

text: ArrayExpress

text: Protocols: Cells were grown in modified Hayflick medium miRNeasy kit from Qiagen (in column DNase) Strand-specific RNA-seq library, the TruSeq Stranded mRNA Sample Prep Kit v2 (Illumina)

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: EMBL/CRG Systems Biology Research Unit, Centre for Genomic Regulation (CRG)

text: public

text: E-MTAB-4642:TF237_6h_2_9343_GAGTGG_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF238_6h_1_9344_ACTGAT_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF238_6h_2_9345_ATTCCT_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF239_6h_1_9346_ATCACG_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF239_6h_2_9347_CGATGT_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF242_6h_1_9348_TTAGGC_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF242_6h_2_9349_TGACCA_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF243_6h_1_9350_ACAGTG_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF243_6h_2_9351_GCCAAT_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF245_6h_1_9352_CAGATC_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF245_6h_2_9353_ACTTGA_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF246bis_6h_1_9354_GATCAG_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF246bis_6h_2_9355_TAGCTT_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF247_6h_1_9356_GGCTAC_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF247_6h_2_9357_CTTGTA_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF249bis_6h_2_9404_TAGCTT_read1.fastq

text: ArrayExpress

text: Protocols: Cells were grown in modified Hayflick medium miRNeasy kit from Qiagen (in column DNase) Strand-specific RNA-seq library, the TruSeq Stranded mRNA Sample Prep Kit v2 (Illumina)

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: EMBL/CRG Systems Biology Research Unit, Centre for Genomic Regulation (CRG)

text: public

text: E-MTAB-4642:TF250_6h_1_9375_ACAGTG_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF250_6h_2_9376_GCCAAT_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF251_6h_1_9377_CAGATC_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF251_6h_2_9378_ACTTGA_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF252_6h_1_9379_GATCAG_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF252_6h_2_9380_TAGCTT_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF253_6h_1_9381_GGCTAC_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF253_6h_2_9382_CTTGTA_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF254_6h_1_9383_AGTCAA_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF254_6h_2_9384_AGTTCC_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF257_6h_1_9385_ATGTCA_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF257_6h_2_9386_CCGTCC_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF259_6h_1_9387_GTCCGC_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF259_6h_2_9388_GTGAAA_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF25_6h_1_9112_GATCAG_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF25_6h_2_9113_TAGCTT_read1.fastq

text: ArrayExpress

text: Protocols: Cells were grown in modified Hayflick medium miRNeasy kit from Qiagen (in column DNase) Strand-specific RNA-seq library, the TruSeq Stranded mRNA Sample Prep Kit v2 (Illumina)

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: EMBL/CRG Systems Biology Research Unit, Centre for Genomic Regulation (CRG)

text: public

text: E-MTAB-4642:TF260_6h_1_9389_GTGGCC_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF260_6h_2_9390_GTTTCG_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF261_6h_1_9391_CGTACG_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF261_6h_2_9392_GAGTGG_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF265_6h_1_9393_ACTGAT_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF265_6h_2_9394_ATTCCT_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF266_6h_1_9395_ATCACG_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF266_6h_2_9396_CGATGT_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF267_6h_1_9397_TTAGGC_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF267_6h_2_9398_TGACCA_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF268_6h_1_9399_ACAGTG_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF268_6h_2_9400_GCCAAT_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF297_6h_1_9401_CAGATC_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF297_6h_2_9402_ACTTGA_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF40_6h_1_9114_GGCTAC_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF40_6h_2_9115_CTTGTA_read1.fastq

text: ArrayExpress

text: Protocols: Cells were grown in modified Hayflick medium miRNeasy kit from Qiagen (in column DNase) Strand-specific RNA-seq library, the TruSeq Stranded mRNA Sample Prep Kit v2 (Illumina)

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: EMBL/CRG Systems Biology Research Unit, Centre for Genomic Regulation (CRG)

text: public

text: E-MTAB-4642:TF42_6h_1_9358_AGTCAA_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF42_6h_2_9359_AGTTCC_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: public

text: E-MTAB-4642:TF_249bis_6h_1_9403_GATCAG_read1.fastq

text: ArrayExpress

text: 6 hours growth

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129

text: Mycoplasma pneumoniae M129


text: UChicago

text: public

text: SPF

characteristic: condition

text: mouse gut metagenome

text: mouse gut metagenome

text: Day 0. Ctrl.1.rep2

text: No treatment

characteristic: treatment


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UChicago

text: public

text: SPF

text: mouse gut metagenome

text: mouse gut metagenome

text: Day 0. Ctrl.2.rep2

text: No treatment


characteristic: External Id

text: UChicago

text: public

text: SPF

text: mouse gut metagenome

text: mouse gut metagenome

text: Day 0. Ctrl.3.rep2

characteristic: title

text: No treatment


text: UChicago

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: SPF

text: mouse gut metagenome

text: mouse gut metagenome

text: Day 0. Ctrl.4.rep2

text: No treatment


text: UChicago

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: SPF

text: mouse gut metagenome

text: mouse gut metagenome

text: Day 0.Abx.1.rep2

text: Broad-spectrum antibiotics


text: UChicago

text: public

text: SPF

text: mouse gut metagenome

text: mouse gut metagenome

text: Day 0.Abx.2.rep2

text: Broad-spectrum antibiotics


text: UChicago

text: public

text: SPF

text: mouse gut metagenome

text: mouse gut metagenome

text: Day 0.Abx.3.rep2

text: Broad-spectrum antibiotics


text: UChicago

text: public

text: SPF

text: mouse gut metagenome

text: mouse gut metagenome

text: Day 0.Abx.4.rep2

text: Broad-spectrum antibiotics


text: UChicago

text: public

text: SPF

text: mouse skin metagenome

text: mouse skin metagenome

text: Day 0.Ctrl.1.rep1

text: No treatment


text: UChicago

text: public

text: SPF

text: mouse skin metagenome

text: mouse skin metagenome

text: Day 0.Ctrl.2.rep1

text: No treatment


text: UChicago

text: public

text: SPF

text: mouse skin metagenome

text: mouse skin metagenome

text: Day 0.Ctrl.3.rep1

text: No treatment


text: UChicago

text: public

text: SPF

text: mouse skin metagenome

text: mouse skin metagenome

text: Day 0.Ctrl.4.rep1

text: No treatment


text: UChicago

text: public

text: SPF

text: mouse skin metagenome

text: mouse skin metagenome

text: Day 0.Abx.1.rep1

text: Broad-spectrum antibiotics


text: UChicago

text: public

text: SPF

text: mouse skin metagenome

text: mouse skin metagenome

text: Day 0.Abx.2.rep1

text: Broad-spectrum antibiotics


text: UChicago

text: public

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text: mouse skin metagenome

text: mouse skin metagenome

text: Day 0.Abx.3.rep1

text: Broad-spectrum antibiotics


text: UChicago

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text: mouse skin metagenome

text: mouse skin metagenome

text: Day 0.Abx.4.rep1

text: Broad-spectrum antibiotics


text: UChicago

text: public

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text: mouse gut metagenome

text: Day -10 Abx NM 1

text: Pre-treatment


text: UChicago

text: public

text: SPF

text: mouse gut metagenome

text: mouse gut metagenome

text: Day -10 Abx NM 2

text: Pre-treatment


text: UChicago

text: public

text: SPF

text: mouse gut metagenome

text: mouse gut metagenome

text: Day -10 Abx NM 3

text: Pre-treatment


text: UChicago

text: public

text: SPF

text: mouse gut metagenome

text: mouse gut metagenome

text: Day -10 Abx NM 4

text: Pre-treatment


text: UChicago

text: public

text: SPF

text: mouse gut metagenome

text: mouse gut metagenome

text: Day -10 Abx OM 1

text: Pre-treatment


text: UChicago

text: public

text: SPF

text: mouse gut metagenome

text: mouse gut metagenome

text: Day -10 Abx OM 2

text: Pre-treatment


text: UChicago

text: public

text: SPF

text: mouse gut metagenome

text: mouse gut metagenome

text: Day -10 Abx OM 3

text: Pre-treatment


text: UChicago

text: public

text: SPF

text: mouse gut metagenome

text: mouse gut metagenome

text: Day -10 Abx OM 4

text: Pre-treatment


text: UChicago

text: public

text: SPF

text: mouse gut metagenome

text: mouse gut metagenome

text: Day -10 Ctrl 1

text: No treatment


text: UChicago

text: public

text: SPF

text: mouse gut metagenome

text: mouse gut metagenome

text: Day -10 Ctrl 2

text: No treatment


text: UChicago

text: public

text: SPF

text: mouse gut metagenome

text: mouse gut metagenome

text: Day -10 Ctrl 3

text: No treatment


text: UChicago

text: public

text: SPF

text: mouse gut metagenome

text: mouse gut metagenome

text: Day -10 Ctrl 4

text: No treatment


text: UChicago

text: public

text: SPF

text: mouse gut metagenome

text: mouse gut metagenome

text: Day -10 Ctrl MQ 1

text: No treatment


text: UChicago

text: public

text: SPF

text: mouse gut metagenome

text: mouse gut metagenome

text: Day -10 Ctrl MQ 2

text: No treatment


text: UChicago

text: public

text: SPF

text: mouse gut metagenome

text: mouse gut metagenome

text: Day -10 Ctrl MQ 3

text: No treatment


text: UChicago

text: public

text: SPF

text: mouse gut metagenome

text: mouse gut metagenome

text: Day -10 Ctrl MQ 4

text: No treatment


text: UChicago

text: public

text: SPF

text: mouse gut metagenome

text: mouse gut metagenome

text: Day 0 Abx NM 1

text: Broad-spectrum antibiotics


text: UChicago

text: public

text: SPF

text: mouse gut metagenome

text: mouse gut metagenome

text: Day 0 Abx NM 2

text: Broad-spectrum antibiotics


text: UChicago

text: public

text: SPF

text: mouse gut metagenome

text: mouse gut metagenome

text: Day 0 Abx NM 3

text: Broad-spectrum antibiotics


text: UChicago

text: public

text: SPF

text: mouse gut metagenome

text: mouse gut metagenome

text: Day 0 Abx NM 4

text: Broad-spectrum antibiotics


text: UChicago

text: public

text: SPF

text: mouse gut metagenome

text: mouse gut metagenome

text: Day 0 Abx OM 1

text: Broad-spectrum antibiotics


text: UChicago

text: public

text: SPF

text: mouse gut metagenome

text: mouse gut metagenome

text: Day 0 Abx OM 2

text: Broad-spectrum antibiotics


text: UChicago

text: public

text: SPF

text: mouse gut metagenome

text: mouse gut metagenome

text: Day 0 Abx OM 3

text: Broad-spectrum antibiotics


text: UChicago

text: public

text: SPF

text: mouse gut metagenome

text: mouse gut metagenome

text: Day 0 Abx OM 4

text: Broad-spectrum antibiotics


text: UChicago

text: public

text: SPF

text: mouse skin metagenome

text: mouse skin metagenome

text: Day -10 Abx NM 1

text: Pre-treatment


text: UChicago

text: public

text: SPF

text: mouse skin metagenome

text: mouse skin metagenome

text: Day -10 Abx NM 2

text: Pre-treatment


text: UChicago

text: public

text: SPF

text: mouse skin metagenome

text: mouse skin metagenome

text: Day -10 Abx NM 3

text: Pre-treatment


text: UChicago

text: public

text: SPF

text: mouse skin metagenome

text: mouse skin metagenome

text: Day -10 Abx NM 4

text: Pre-treatment


text: UChicago

text: public

text: SPF

text: mouse skin metagenome

text: mouse skin metagenome

text: Day -10 Abx OM 2

text: Pre-treatment


text: UChicago

text: public

text: SPF

text: mouse skin metagenome

text: mouse skin metagenome

text: Day -10 Abx OM 3

text: Pre-treatment


text: UChicago

text: public

text: SPF

text: mouse skin metagenome

text: mouse skin metagenome

text: Day -10 Abx OM 4

text: Pre-treatment


text: UChicago

text: public

text: SPF

text: mouse skin metagenome

text: mouse skin metagenome

text: Day -10 Ctrl 1

text: No treatment


text: UChicago

text: public

text: SPF

text: mouse skin metagenome

text: mouse skin metagenome

text: Day -10 Ctrl 2

text: No treatment


text: UChicago

text: public

text: SPF

text: mouse skin metagenome

text: mouse skin metagenome

text: Day -10 Ctrl 3

text: No treatment


text: UChicago

text: public

text: SPF

text: mouse skin metagenome

text: mouse skin metagenome

text: Day -10 Ctrl MQ 1

text: No treatment


text: UChicago

text: public

text: SPF

text: mouse skin metagenome

text: mouse skin metagenome

text: Day -10 Ctrl MQ 2

text: No treatment


text: UChicago

text: public

text: SPF

text: mouse skin metagenome

text: mouse skin metagenome

text: Day -10 Ctrl MQ 3

text: No treatment


text: UChicago

text: public

text: SPF

text: mouse skin metagenome

text: mouse skin metagenome

text: Day -10 Ctrl MQ 4

text: No treatment


text: UChicago

text: public

text: SPF

text: mouse skin metagenome

text: mouse skin metagenome

text: Day 0 Abx NM 1

text: Broad-spectrum antibiotics


text: UChicago

text: public

text: SPF

text: mouse skin metagenome

text: mouse skin metagenome

text: Day 0 Abx NM 2

text: Broad-spectrum antibiotics


text: UChicago

text: public

text: SPF

text: mouse skin metagenome

text: mouse skin metagenome

text: Day 0 Abx NM 3

text: Broad-spectrum antibiotics


text: UChicago

text: public

text: SPF

text: mouse skin metagenome

text: mouse skin metagenome

text: Day 0 Abx NM 4

text: Broad-spectrum antibiotics


text: UChicago

text: public

text: SPF

text: mouse skin metagenome

text: mouse skin metagenome

text: Day 0 Abx OM 1

text: Broad-spectrum antibiotics


text: UChicago

text: public

text: SPF

text: mouse skin metagenome

text: mouse skin metagenome

text: Day 0 Abx OM 2

text: Broad-spectrum antibiotics


text: UChicago

text: public

text: SPF

text: mouse skin metagenome

text: mouse skin metagenome

text: Day 0 Abx OM 3

text: Broad-spectrum antibiotics


text: UChicago

text: public

text: SPF

text: mouse skin metagenome

text: mouse skin metagenome

text: Day 0 Abx OM 4

text: Broad-spectrum antibiotics


text: SOUTHERNCROSSPLANTSCIENCE

text: public

unit: year

characteristic: age

characteristic: genotype

text: Macadamia integrifolia

text: Macadamia integrifolia

text: Macadamia Integrifolia


text: CNAG

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: RNA sample from millenial olive tree, Santander (Farga variety)

text: Olea europaea subsp. europaea

text: Olea europaea subsp. europaea

text: Olea europaea subsp. europaea RNA from green olive fruit


text: CNAG

text: public

characteristic: description

text: Olea europaea subsp. europaea

text: Olea europaea subsp. europaea

text: Olea europaea subsp. europaea RNA from flower bud


characteristic: ENA-CHECKLIST

text: CNAG

text: public

text: Olea europaea subsp. europaea

text: Olea europaea subsp. europaea

text: Olea europaea subsp. europaea RNA from flower


text: CNAG

text: public

text: Olea europaea subsp. europaea

characteristic: organism

text: Olea europaea subsp. europaea

text: Olea europaea subsp. europaea RNA from young leaves


text: CNAG

text: public

text: Olea europaea subsp. europaea

text: Olea europaea subsp. europaea

text: Olea europaea subsp. europaea RNA from old leaves


text: National Health Research Institutes

text: public

tag: Namespace:National Health Research Institutes

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: Non-Dengue 5 1st IgG


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Non-Dengue 5 2nd IgG


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Simple Dengue 1 1st IgG


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Simple Dengue 1 2nd IgG


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Simple Dengue 2 1st IgG


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Simple Dengue 2 2nd IgG


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Sample Dengue 3 1st IgG


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Sample Dengue 3 2nd IgG


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Sample Dengue 4 1st IgG


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Sample Dengue 4 2nd IgG


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Sample Dengue 5 1st IgG


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Sample Dengue 5 2nd IgG


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Sample Dengue 6 1st IgG


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Sample Dengue 6 2nd IgG


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Sample Dengue 7 1st IgG


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Sample Dengue 7 2nd IgG


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Hemorrhagic Dengue 1 1st IgG


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Hemorrhagic Dengue 1 2nd IgG


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Hemorrhagic Dengue 2 1st IgG


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Hemorrhagic Dengue 2 2nd IgG


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Hemorrhagic Dengue 3 1st IgG


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Hemorrhagic Dengue 3 2nd IgG


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Hemorrhagic Dengue 4 1st IgG


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Hemorrhagic Dengue 4 2nd IgG


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Hemorrhagic Dengue 5 1st IgG


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Hemorrhagic Dengue 5 2nd IgG


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Hemorrhagic Dengue 6 1st IgG


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Hemorrhagic Dengue 6 2nd IgG


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Hemorrhagic Dengue 7 1st IgG


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Hemorrhagic Dengue 7 2nd IgG


text: public

tag: Namespace:European Research Institute for the Biology of Ageing (ERIBA), University of Groningen, UMC Groningen, the Netherlands

text: ArrayExpress

characteristic: broker name

text: neuron

characteristic: cell type

text: human

text: Protocols: From each sample 10 sections of 50m were used for nuclei isolation. To ensure that we analyzed brain areas with amyloid plaques, sections were cut directly after taking sections for A staining. All clean-ups between enzymatic reactions were performed using AMPure XP magnetic beads (Agencourt AMPure, Beckman Coulter, Brea, California, USA). After DNA fragmentation by MNase (New England Biolabs (NEB), End repair and A-tailing of the DNA fragments was performed in one reaction mix including T4 polymerase, T4 PNK and Bst 2.0 warm start polymerase (all NEB). End repair was performed at 25C for 30 minutes while the A-tailing reaction was done at 68C for 30 minutes. Subsequently without clean up, ligation reaction mixture containing T4 DNA ligase (NEB) was added and Illumina PE forked adapters were ligated to either side of the DNA fragments. After clean up, the adapter containing DNA fragments were directly subjected to 17 cycles of PCR using Phusion High Fidelity DNA polymerase (NEB) and custom barcoded primers. After PCR amplification a final AMPure bead clean-up was performed and DNA was eluted in 6 l elution buffer (EB).

text: Alzheimers disease

characteristic: disease

text: Braak stage VI

characteristic: disease staging

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: frontal cortex

characteristic: organism part

text: Homo sapiens

text: female

characteristic: sex

text: OK

characteristic: well information


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: European Research Institute for the Biology of Ageing (ERIBA), University of Groningen, UMC Groningen, the Netherlands

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: neuron

text: human

text: Alzheimers disease

text: Braak stage VI

text: Homo sapiens

text: Homo sapiens

text: frontal cortex

text: Homo sapiens

text: female

characteristic: title

text: OK


characteristic: ENA-CHECKLIST

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: neuron

text: human

characteristic: common name

characteristic: description

text: Alzheimers disease

text: Braak stage IV

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: frontal cortex

text: Homo sapiens

text: male

text: OK


text: public

text: ArrayExpress

characteristic: broker name

text: neuron

characteristic: cell type

text: human

text: Alzheimers disease

characteristic: disease

text: Braak stage V

characteristic: disease staging

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: frontal cortex

characteristic: organism part

text: Homo sapiens

text: female

characteristic: sex

text: OK


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ArrayExpress

text: neuron

text: human

text: Protocols: Fresh-frozen postmortem brain samples from the frontal cortex were obtained from the Dutch Brain Bank and from the department of Pathology & Medical Biology of the University Medical Center Groningen (UMCG). In this study samples from non-demented controls (Braak stage 0-I) and a brain sample from an individual with Down’s syndrome served as a positive control for the detection of trisomy of chromosome 21. From each sample 10 sections of 50μm were used for nuclei isolation. All clean-ups between enzymatic reactions were performed using AMPure XP magnetic beads (Agencourt AMPure, Beckman Coulter, Brea, California, USA). After DNA fragmentation by MNase (New England Biolabs (NEB), End repair and A-tailing of the DNA fragments was performed in one reaction mix including T4 polymerase, T4 PNK and Bst 2.0 warm start polymerase (all NEB). End repair was performed at 25°C for 30 minutes while the A-tailing reaction was done at 68°C for 30 minutes. Subsequently without clean up, ligation reaction mixture containing T4 DNA ligase (NEB) was added and Illumina PE forked adapters were ligated to either side of the DNA fragments. After clean up, the adapter containing DNA fragments were directly subjected to 17 cycles of PCR using Phusion High Fidelity DNA polymerase (NEB) and custom barcoded primers. After PCR amplification a final AMPure bead clean-up was performed and DNA was eluted in 6 μl elution buffer (EB).

text: normal

text: Braak stage 0

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: female

text: OK

characteristic: well information


characteristic: ENA-CHECKLIST

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: neuron

text: human

characteristic: common name

text: normal

text: Braak stage 0

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: male

characteristic: title

text: OK


text: UNIVERSITY OF STIRLING

text: public

tag: Namespace:UNIVERSITY OF STIRLING

text: Nile tilapia

text: Oreochromis niloticus

characteristic: organism

text: Oreochromis niloticus

text: Tilapia ddRAD


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Non-Dengue 5 1st IgA


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Non-Dengue 5 2nd IgA


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Simple Dengue 1 1st IgA


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Simple Dengue 1 2nd IgA


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Simple Dengue 2 1st IgA


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Simple Dengue 2 2nd IgA


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Simple Dengue 3 1st IgA


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Simple Dengue 3 2nd IgA


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Simple Dengue 4 1st IgA


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Simple Dengue 4 2nd IgA


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Simple Dengue 5 1st IgA


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Simple Dengue 5 2nd IgA


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Simple Dengue 6 1st IgA


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Simple Dengue 6 2nd IgA


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Simple Dengue 7 1st IgA


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Simple Dengue 7 2nd IgA


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Hemorrhagic Dengue 1 1st IgA


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Hemorrhagic Dengue 1 2nd IgA


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Hemorrhagic Dengue 2 1st IgA


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Hemorrhagic Dengue 2 2nd IgA


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Hemorrhagic Dengue 3 1st IgA


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Hemorrhagic Dengue 3 2nd IgA


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Hemorrhagic Dengue 4 1st IgA


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Hemorrhagic Dengue 4 2nd IgA


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Hemorrhagic Dengue 5 1st IgA


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Hemorrhagic Dengue 5 2nd IgA


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Hemorrhagic Dengue 6 1st IgA


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Hemorrhagic Dengue 6 2nd IgA


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Hemorrhagic Dengue 7 1st IgA


text: National Health Research Institutes

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Hemorrhagic Dengue 7 2nd IgA


text: URMITE

text: public

text: Alistipes provencensis was isolated from stool sample in the hospital of Timone

characteristic: description

text: Alistipes sp. Marseille-P2431

text: Alistipes sp. Marseille-P2431

characteristic: strain

text: Alistipes provencensis genome


characteristic: ENA-FIRST-PUBLIC

text: DUKE-NUS

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Tumor


characteristic: ENA-LAST-UPDATE

text: DUKE-NUS

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Normal


characteristic: External Id

text: ERIBA, RUG , UMC GRONINGEN

text: public

tag: Namespace:ERIBA, RUG , UMC GRONINGEN

text: human

text: Homo sapiens

text: Homo sapiens