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Lund Chronic Parasite 2014_138

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Lund Chronic Parasite 2014_139

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Lund Chronic Parasite 2014_140

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text: UNIMIB

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unit: m

characteristic: depth

text: cDNA from Landsort Deep sediment (total RNA)

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characteristic: title


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text: walleye pollock

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text: South Korea

text: Kangwondo

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text: Gadus chalcogrammus

text: Gadus chalcogrammus

text: Kangwondo Alaska pollock sikhae sample


text: PASTEUR

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characteristic: collection date

text: Stable resistance to metronidazole in a non-toxigenic Clostridium difficile strain was investigated both at genomic and proteomic level. Alterations in the metabolic pathway involving the pyruvate-ferredoxin oxidoreductase were found, suggesting that reduction of metronidazole, required for its activity, may be less efficient in this strain. Proteomic studies also showed a cellular response to the oxidative stress.

characteristic: description

text: Spain

text: healthy

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text: Faeces

text: Peptoclostridium difficile

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text: C. difficile strain stable-resistant to metronidazole


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text: ROSLIN

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text: United Kingdom:Scotland

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text: Legionella pneumophila

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text: Legionella pneumophila

text: Legionella pneumophila, Edinburgh non-outbreak, 12_3965


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text: Legionella pneumophila, Edinburgh outbreak, 12_4042


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text: Legionella pneumophila, Edinburgh outbreak, 12_4053


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text: United Kingdom:Scotland

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text: Legionella pneumophila, Edinburgh outbreak, 12_4058


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text: Legionella pneumophila

characteristic: strain

text: Legionella pneumophila, Edinburgh non-outbreak, 12_4904


text: ROSLIN

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: United Kingdom:Scotland

characteristic: geographic location (country and/or sea)

text: Diseased

text: Human

text: Patient

text: Legionella pneumophila

text: Legionella pneumophila

text: Legionella pneumophila, Edinburgh outbreak, 12_5064


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ROSLIN

text: public

text: United Kingdom:Scotland

text: Diseased

text: Human

text: Patient

characteristic: isolation source

text: Legionella pneumophila

text: Legionella pneumophila

text: Legionella pneumophila, Edinburgh outbreak, 12_5223


characteristic: ENA-LAST-UPDATE

text: ROSLIN

text: public

characteristic: collection date

text: United Kingdom:Scotland

text: Diseased

text: Human

text: Patient

text: Legionella pneumophila

characteristic: organism

text: Legionella pneumophila

text: Legionella pneumophila, Edinburgh outbreak, 12_5251


characteristic: External Id

text: ROSLIN

text: public

text: United Kingdom:Scotland

text: Diseased

characteristic: host health state

text: Human

characteristic: host scientific name

text: Patient

text: Legionella pneumophila

text: Legionella pneumophila

text: Legionella pneumophila, Edinburgh outbreak, 12_5329


text: ROSLIN

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: United Kingdom:Scotland

text: Diseased

text: Human

text: Patient

text: Legionella pneumophila

text: Legionella pneumophila

text: Legionella pneumophila, Edinburgh outbreak, 12_5383

characteristic: title


text: ROSLIN

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: United Kingdom:Scotland

text: Diseased

text: Human

text: Patient

text: Legionella pneumophila

text: Legionella pneumophila

characteristic: serovar

text: Legionella pneumophila, Edinburgh outbreak, 12_5414


text: ROSLIN

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: United Kingdom:Scotland

text: Diseased

text: Human

text: Patient

text: Legionella pneumophila

text: Legionella pneumophila

characteristic: strain

text: Legionella pneumophila, Edinburgh outbreak, 12_5415


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ROSLIN

text: public

text: United Kingdom:England

characteristic: geographic location (country and/or sea)

text: Human

text: Legionella pneumophila

text: Legionella pneumophila

text: Legionella pneumophila, Historical PHE, HO4020049


characteristic: ENA-LAST-UPDATE

text: ROSLIN

text: public

characteristic: collection date

text: United Kingdom:England

text: Environmental

text: Legionella pneumophila

text: Legionella pneumophila

text: Legionella pneumophila, Historical PHE, HO80160261


characteristic: External Id

text: ROSLIN

text: public

text: United Kingdom:England

text: Environmental

text: Legionella pneumophila

characteristic: organism

text: Legionella pneumophila

text: Legionella pneumophila, Historical PHE, HO80160262


text: ROSLIN

text: public

text: United Kingdom:England

text: Environmental

characteristic: host scientific name

text: Legionella pneumophila

text: Legionella pneumophila

text: Legionella pneumophila, Historical PHE, HO80160263


text: ROSLIN

characteristic: INSDC center name

text: public

text: United Kingdom:England

text: Environmental

text: Legionella pneumophila

text: Legionella pneumophila

text: Legionella pneumophila, Historical PHE, HO92620872


text: UNIV-WUE

characteristic: INSDC first public

text: public

text: Oral swabs of reptiles

characteristic: description

text: Vivarium

characteristic: environment (biome)

text: Vivarium

characteristic: environment (feature)

text: Vivarium

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: humam oral environmental package

text: metagenome

characteristic: investigation type

text: Python regius

text: RepMic

characteristic: project name

text: Python regius

text: MiSeq

characteristic: sequencing method

text: Reptile Oral Microbiota


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIV-WUE

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Oral swabs of reptiles

text: Vivarium

text: Vivarium

text: Vivarium

text: Germany

characteristic: geographic location (country and/or sea)

text: host-associated

text: metagenome

text: Acrantophis dumerili

text: RepMic

text: Acrantophis dumerili

text: MiSeq

text: Reptile Oral Microbiota

characteristic: title


characteristic: External Id

text: UNIV-WUE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: collection date

text: Oral swabs of reptiles

characteristic: description

text: Vivarium

characteristic: environment (biome)

text: Vivarium

characteristic: environment (feature)

text: Vivarium

text: Germany

text: host-associated

text: metagenome

text: Pantherophis guttatus

characteristic: organism

text: RepMic

text: Pantherophis guttatus

text: MiSeq

text: Reptile Oral Microbiota


characteristic: ENA-CHECKLIST

text: UNIV-WUE

text: public

text: Oral swabs of reptiles

text: Vivarium

text: Vivarium

text: Vivarium

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: humam oral environmental package

text: metagenome

characteristic: investigation type

text: Eublepharis macularius

text: RepMic

characteristic: project name

text: Eublepharis macularius

text: MiSeq

characteristic: sequencing method

text: Reptile Oral Microbiota


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIV-WUE

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Cage control

text: Vivarium

text: Vivarium

text: Vivarium

text: Germany

characteristic: geographic location (country and/or sea)

text: host-associated

text: metagenome

text: Python regius

text: RepMic

text: Python regius

text: MiSeq

text: Reptile Oral Microbiota

characteristic: title


characteristic: External Id

text: UNIV-WUE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: collection date

text: red-eared slider turtle

characteristic: common name

text: Oral swabs of reptiles

characteristic: description

text: Vivarium

characteristic: environment (biome)

text: Vivarium

characteristic: environment (feature)

text: Vivarium

text: Germany

text: host-associated

text: metagenome

text: Trachemys scripta

characteristic: organism

text: RepMic

text: Trachemys scripta

text: MiSeq

text: Reptile Oral Microbiota


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF SEVILLA

text: public

tag: Namespace:UNIVERSITY OF SEVILLA

text: Chlamydomonas reinhardtii wild type CW15 grown in flasks with Sueoka media supplemented with nitrate. Sample taken at ZT4 (4 hours after lights are switched on) in short days conditions (8 hours of light and 16 hours of darkness). Replicate 1.

text: water

text: water

text: water

characteristic: environment (material)

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: Chlamydomonas reinhardtii

text: plant-associated

characteristic: plant-associated environmental package

text: An evolutionarily conserved DOF-CONSTANS module controls photoperiodic signaling in plants

characteristic: project name

text: Chlamydomonas reinhardtii

text: HiSeq 2000 sequencing

characteristic: sequencing method


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF SEVILLA

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Chlamydomonas reinhardtii wild type CW15 grown in flasks with Sueoka media supplemented with nitrate. Sample taken at ZT4 (4 hours after lights are switched on) in short days conditions (8 hours of light and 16 hours of darkness). Replicate 2.

text: water

text: water

text: water

text: Spain

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: Chlamydomonas reinhardtii

text: plant-associated

text: Chlamydomonas reinhardtii

text: HiSeq 2000 sequencing

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF SEVILLA

characteristic: INSDC first public

text: public

characteristic: collection date

text: Chlamydomonas reinhardtii wild type CW15 grown in flasks with Sueoka media supplemented with nitrate. Sample taken at ZT4 (4 hours after lights are switched on) in long days conditions (16 hours of light and 8 hours of darkness). Replicate 1.

characteristic: description

text: water

characteristic: environment (biome)

text: water

characteristic: environment (feature)

text: water

text: Spain

text: mimarks-survey

text: Chlamydomonas reinhardtii

characteristic: organism

text: plant-associated

text: Chlamydomonas reinhardtii

text: HiSeq 2000 sequencing


characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF SEVILLA

text: public

text: Chlamydomonas reinhardtii wild type CW15 grown in flasks with Sueoka media supplemented with nitrate. Sample taken at ZT4 (4 hours after lights are switched on) in long days conditions (16 hours of light and 8 hours of darkness). Replicate 2.

text: water

text: water

text: water

characteristic: environment (material)

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: Chlamydomonas reinhardtii

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

text: Chlamydomonas reinhardtii

text: HiSeq 2000 sequencing

characteristic: sequencing method


characteristic: External Id

text: UNIVERSITY OF SEVILLA

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: CrDOF overexpressing Chlamydomonas reinhardtii CrDOFox grown in flasks with Sueoka media supplemented with nitrate. Sample taken at ZT4 (4 hours after lights are switched on) in short days conditions (8 hours of light and 16 hours of darkness). Replicate 1.

text: water

text: water

text: water

text: Spain

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: Chlamydomonas reinhardtii

text: plant-associated

text: Chlamydomonas reinhardtii

text: HiSeq 2000 sequencing

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF SEVILLA

characteristic: INSDC first public

text: public

characteristic: collection date

text: CrDOF overexpressing Chlamydomonas reinhardtii CrDOFox grown in flasks with Sueoka media supplemented with nitrate. Sample taken at ZT4 (4 hours after lights are switched on) in short days conditions (8 hours of light and 16 hours of darkness). Replicate 2.

characteristic: description

text: water

characteristic: environment (biome)

text: water

characteristic: environment (feature)

text: water

text: Spain

text: mimarks-survey

text: Chlamydomonas reinhardtii

characteristic: organism

text: plant-associated

text: Chlamydomonas reinhardtii

text: HiSeq 2000 sequencing


characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF SEVILLA

text: public

text: CrDOF overexpressing Chlamydomonas reinhardtii CrDOFox grown in flasks with Sueoka media supplemented with nitrate. Sample taken at ZT4 (4 hours after lights are switched on) in long days conditions (16 hours of light and 8 hours of darkness). Replicate 1.

text: water

text: water

text: water

characteristic: environment (material)

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: Chlamydomonas reinhardtii

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

text: Chlamydomonas reinhardtii

text: HiSeq 2000 sequencing

characteristic: sequencing method


characteristic: External Id

text: UNIVERSITY OF SEVILLA

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: CrDOF overexpressing Chlamydomonas reinhardtii CrDOFox grown in flasks with Sueoka media supplemented with nitrate. Sample taken at ZT4 (4 hours after lights are switched on) in long days conditions (16 hours of light and 8 hours of darkness). Replicate 2.

text: water

text: water

text: water

text: Spain

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: Chlamydomonas reinhardtii

text: plant-associated

text: Chlamydomonas reinhardtii

text: HiSeq 2000 sequencing

characteristic: title