characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Instituto de Medicina Molecular

text: public

characteristic: Submitter Id

text: ArrayExpress

text: AnTat 1.1E 90-13

text: Protocols: Parasites were entrained/synchronized in vitro for three days by incubating parasites for 12 hr in darkness and 12 hr under a LED 3W lamp. On the 4th and 5th days, parasites were kept in either these alternating conditions or in constant darkness. Bloodstream forms were grown routinely in HMI-11 at 37°C in 5% CO2. Individual cultures of parasites were prepared, adjusting the initial parasite density so that at each time point parasite cultures would be at 10^6 parasites/mL. Samples were collected every 4 hr throughout two days. For the alternating light experiment, a LED 3W lamp was used to illuminate the cultures inside the incubator, alternating between light and darkness every 12 hr. Temperature was kept at 37°C and fluctuations were monitored and shown to be less than 0.1°C. RNA was isolated from 10^7 Trypanosoma brucei cells with TRIzol reagent according to the manufacturer’s instructions (Life Technologies). 1 µg of total RNA was enriched for mRNA using Poly-A beads for RNA-seq according to the manufacturer’s instructions (Invitrogen). The removal of ribosomal RNAs was confirmed on a Bioanalyzer Nano Chip (Agilent Technologies). Sequencing libraries were constructed using TruSeq RNA Sample preparation protocol (Illumina).

text: Bloodstream form

text: Trypanosoma brucei

text: Trypanosoma brucei

text: Trypanosoma brucei

text: Constant darkness

text: AnTat 1.1E


status: PUBLIC

tag: attribute

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Instituto de Medicina Molecular

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Instituto de Medicina Molecular

text: ArrayExpress

characteristic: broker name

text: AnTat 1.1E 90-13

characteristic: cell line

characteristic: description

text: Bloodstream form

characteristic: developmental stage

text: Trypanosoma brucei

characteristic: organism

text: Trypanosoma brucei

text: Trypanosoma brucei

text: Alternating light

characteristic: stimulus

text: AnTat 1.1E

characteristic: strain

unit: hour

characteristic: time

characteristic: title

type: has member


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Instituto de Medicina Molecular

text: public

characteristic: Submitter Id

text: ArrayExpress

text: AnTat 1.1E 90-13

text: Protocols: Parasites were entrained/synchronized in vitro for three days by incubating parasites for 12 hr at 32°C and 12 hr at 37°C. On the 4th and 5th days, parasites were kept in either these alternating conditions or at constant 37°C. Bloodstream forms were grown routinely in HMI-11 at 37°C in 5% CO2. Individual cultures of parasites were prepared, adjusting the initial parasite density so that at each time point parasite cultures would be at 10^6 parasites/mL. Samples were collected every 4 hr throughout two days. Temperature was varied every 12 hr from 32°C to 37°C or remained at constant 37°C. RNA was isolated from 10^7 Trypanosoma brucei cells with TRIzol reagent according to the manufacturer’s instructions (Life Technologies). 1 µg of total RNA was enriched for mRNA using Poly-A beads for RNA-seq according to the manufacturer’s instructions (Invitrogen). The removal of ribosomal RNAs was confirmed on a Bioanalyzer Nano Chip (Agilent Technologies). Sequencing libraries were constructed using TruSeq RNA Sample preparation protocol (Illumina).

text: Bloodstream form

text: Trypanosoma brucei

text: Trypanosoma brucei

text: Trypanosoma brucei

text: Constant temperature

text: AnTat 1.1E


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Instituto de Medicina Molecular

characteristic: INSDC center name

text: public

text: ArrayExpress

text: AnTat 1.1E 90-13

text: Protocols: Differentiation of bloodstream forms to procyclic forms was induced by addition of 6 mM cis-acconitate and a temperature change from 37°C to 28°C. Parasites were entrained/synchronized in vitro for three days by incubating parasites for 12 hr at 22°C and 12 hr at 27°C. On the 4th and 5th days, parasites were kept in either these alternating conditions or at constant 27ºC. Individual cultures of parasites were prepared, adjusting the initial parasite density so that at each time point parasite cultures would be at 10^6 parasites/mL. Samples were collected every 4 hr throughout the day. Temperature varied every 12 h from 23°C to 28°C or remained at constant 28°C. RNA was isolated from 10^7 Trypanosoma brucei cells with TRIzol reagent according to the manufacturer’s instructions (Life Technologies). 1 µg of total RNA was enriched for mRNA using Poly-A beads for RNA-seq according to the manufacturer’s instructions (Invitrogen). The removal of ribosomal RNAs was confirmed on a Bioanalyzer Nano Chip (Agilent Technologies). Sequencing libraries were constructed using TruSeq RNA Sample preparation protocol (Illumina).

text: Bloodstream form

text: Trypanosoma brucei

text: Trypanosoma brucei

text: Trypanosoma brucei

text: Alternating temperature

text: AnTat 1.1E


text: Instituto de Medicina Molecular

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: AnTat 1.1E 90-13

text: Bloodstream form

text: Trypanosoma brucei

text: Trypanosoma brucei

text: Trypanosoma brucei

text: Constant temperature

text: AnTat 1.1E


P. luminescens TT01 WT A

text: public

characteristic: SRA accession

text: P. luminescens TT01 WT A

tag: Namespace:GOETHE UNIVERSITY OF FRANKFURT AM MAIN, INSTITUTE OF MOLECULAR BIOSCIENCES

text: Photorhabdus luminescens subsp. laumondii

text: P. luminescens Hfq RNA sequencing


P. luminescens TT01 WT B

text: GOETHE UNIVERSITY OF FRANKFURT AM MAIN, INSTITUTE OF MOLECULAR BIOSCIENCES

text: public

text: P. luminescens TT01 WT B

text: P. luminescens Hfq RNA sequencing


P. luminescens TT01 hfq deletion A

text: public

text: P. luminescens TT01 hfq deletion A

text: P. luminescens Hfq RNA sequencing


P. luminescens TT01 hfq deletion B

text: public

text: P. luminescens TT01 hfq deletion B

text: P. luminescens Hfq RNA sequencing


name: P. luminescens TT01 hfq deletion + pACYC_hfq_complemented A

text: public

text: P. luminescens Hfq RNA sequencing


name: P. luminescens TT01 hfq deletion + pACYC_hfq_complemented B

text: public

text: P. luminescens Hfq RNA sequencing


name: P. luminescens TT01 hexA-hfq double deletion A

text: public

text: P. luminescens Hfq RNA sequencing


name: P. luminescens TT01 hexA-hfq double deletion B

text: public

text: P. luminescens Hfq RNA sequencing


text: academisch medisch centrum

text: public

tag: Namespace:academisch medisch centrum

characteristic: collection date

text: Viet Nam

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: host health state

text: Chicken

characteristic: host scientific name

characteristic: isolate

text: Feces

characteristic: isolation source

text: Escherichia coli

text: Escherichia coli

text: Vietnam mcr1 E. coli sample


text: UNIVERSITY OF DELHI

text: public

tag: Namespace:UNIVERSITY OF DELHI

unit: m

characteristic: depth

text: Terrestrial Biome

characteristic: environment (biome)

text: Habitat

characteristic: environment (feature)

text: Sediment

characteristic: environment (material)

text: India

characteristic: geographic location (elevation)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sediment metagenome

characteristic: organism

text: Metagenomic analysis of sediment (MNS2) of Manikaran hot springs

characteristic: project name

text: sediment metagenome

text: sediment

characteristic: sediment environmental package

text: Illumina

characteristic: sequencing method

characteristic: title


E-MTAB-4956:Sample 1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-4956:Sample 1

tag: Namespace:Leibniz-Institute DSMZ-German Collection of Microorganisms and Cell Cultures

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: human

characteristic: common name

text: Protocols: Cell lines were FACS-sorted and single cell clones were picked and phenotyped. Growth of sorted cell clones was observed over a four-week period by microscopy. Fragmentation of 100 ng purified genomic DNA (gDNA) in 55 l Tris-EDTA buffer was done on Covaris S2. Fragmentation of 100 ng purified genomic DNA (gDNA) in 55 l Tris-EDTA buffer was done on Covaris S2. After library preparation from 100 ng of fragmented gDNA using Agilent SureSelectXT v5+UTR (75 Mb), libraries were purified, size validated and prepared for sequencing according to the manufacturer's protocols. Libraries were sequenced on Illumina HiSeq2500 using TruSeq SBS Kit v3-HS (2x101, paired-end run).

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: SU-DHL-5 clone A

characteristic: phenotype

text: Homo sapiens

text: Sample 1


E-MTAB-4956:Sample 2

text: Leibniz-Institute DSMZ-German Collection of Microorganisms and Cell Cultures

text: public

text: E-MTAB-4956:Sample 2

text: ArrayExpress

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: SU-DHL-5 clone B

text: Homo sapiens

text: Sample 2


E-MTAB-4956:Sample 3

text: public

text: E-MTAB-4956:Sample 3

text: ArrayExpress

text: human

text: Homo sapiens

text: Homo sapiens

text: TMD-8 clone A

text: Homo sapiens

text: Sample 3

characteristic: title


E-MTAB-4956:Sample 4

characteristic: ENA-CHECKLIST

text: public

text: E-MTAB-4956:Sample 4

text: ArrayExpress

text: human

text: Homo sapiens

text: Homo sapiens

text: TMD-8 clone B

text: Homo sapiens

text: Sample 4


E-MTAB-4956:Sample 5

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-4956:Sample 5

text: ArrayExpress

text: human

text: Homo sapiens

text: Homo sapiens

text: TMD-8 clone C

text: Homo sapiens

text: Sample 5


characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run20.D.05.2010.5m.Monthlies.515C.926R.a

tag: Namespace:UNIVERSITY OF SOUTHERN CALIFORNIA

characteristic: collection date

text: 16S rRNA gene sequences from <1 micron size fraction

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: Pacific Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: seawater metagenome

characteristic: project name

text: seawater metagenome

text: PE Illumina Miseq 2x300

characteristic: sequencing method

text: water

characteristic: water environmental package


characteristic: External Id

text: UNIVERSITY OF SOUTHERN CALIFORNIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Run20.D.05.2010.5m.Monthlies.515C.926R.b

characteristic: Submitter Id

characteristic: description

text: Pacific Ocean

text: metagenome

text: seawater metagenome

characteristic: organism

text: seawater metagenome

text: PE Illumina Miseq 2x300

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

text: public

characteristic: altitude

characteristic: anonymized name

text: TRUE

text: marine sediment metagenome

characteristic: common name

text: GAZ:Antarctica

characteristic: country

characteristic: depth

text: marine sediment metagenome

text: TRUE

characteristic: elevation

text: marine benthic biome

characteristic: env biome

text: contaminated sediment

characteristic: env feature

text: marine sediment

characteristic: env matter

text: sediment

characteristic: env package

text: marine sediment

text: TRUE

characteristic: extracted DNA avail now

text: Antarctica

characteristic: geo loc name

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: marine sediment metagenome

text: LBNL

text: TRUE

text: TRUE

characteristic: public

text: completed

text: marine sediment

characteristic: sample type

text: Sequenced (16S)

text: marine sediment metagenome

characteristic: title

text: Polluted Polar Coastal Sediments


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: TRUE

text: marine sediment metagenome

text: GAZ:Antarctica

text: marine sediment metagenome

characteristic: description

text: TRUE

text: marine benthic biome

text: contaminated sediment

text: marine sediment

text: sediment

text: marine sediment

text: TRUE

text: Antarctica

text: marine sediment metagenome

characteristic: organism

text: LBNL

text: TRUE

text: TRUE

text: completed

text: marine sediment

text: Sequenced (16S)

text: marine sediment metagenome

text: Polluted Polar Coastal Sediments


text: UCSDMI

text: public

text: TRUE

text: marine sediment metagenome

characteristic: common name

text: GAZ:Argentina

characteristic: country

characteristic: depth

text: marine sediment metagenome

text: TRUE

characteristic: elevation

text: marine benthic biome

characteristic: env biome

text: contaminated sediment

characteristic: env feature

text: marine sediment

characteristic: env matter

text: sediment

characteristic: env package

text: marine sediment

text: TRUE

characteristic: extracted DNA avail now

text: Argentina

characteristic: geo loc name

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: marine sediment metagenome

text: LBNL

text: TRUE

text: TRUE

characteristic: public

text: completed

text: marine sediment

text: Sequenced (16S)

text: marine sediment metagenome

text: Polluted Polar Coastal Sediments


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: TRUE

text: marine sediment metagenome

text: GAZ:Argentina

text: marine sediment metagenome

text: TRUE

text: marine benthic biome

text: contaminated sediment

text: marine sediment

text: sediment

text: marine sediment

text: TRUE

text: Argentina

text: marine sediment metagenome

text: LBNL

text: TRUE

text: TRUE

text: completed

text: marine sediment

characteristic: sample type

text: Sequenced (16S)

text: marine sediment metagenome

text: Polluted Polar Coastal Sediments

characteristic: title


text: UCSDMI

text: public

text: qiita_sid_1198:1198.ARG04.ORi08.InfralitoralA

text: TRUE

text: marine sediment metagenome

characteristic: common name

text: GAZ:Argentina

characteristic: country

characteristic: depth

text: marine sediment metagenome

characteristic: description

text: TRUE

characteristic: elevation

text: marine benthic biome

characteristic: env biome

text: contaminated sediment

characteristic: env feature

text: marine sediment

characteristic: env matter

text: sediment

characteristic: env package

text: marine sediment

text: TRUE

characteristic: extracted DNA avail now

text: Argentina

characteristic: geo loc name

characteristic: host subject id

characteristic: latitude

text: marine sediment metagenome

characteristic: organism

text: LBNL

text: TRUE

text: TRUE

text: completed

text: marine sediment

text: Sequenced (16S)

text: marine sediment metagenome

text: Polluted Polar Coastal Sediments


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_1198:1198.ARG05.ORi08.InfralitoralB

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: TRUE

text: marine sediment metagenome

text: GAZ:Argentina

text: marine sediment metagenome

text: TRUE

text: marine benthic biome

text: contaminated sediment

text: marine sediment

text: sediment

text: marine sediment

text: TRUE

text: Argentina

characteristic: longitude

text: marine sediment metagenome

text: LBNL

text: TRUE

text: TRUE

characteristic: public

text: completed

text: marine sediment

text: Sequenced (16S)

text: marine sediment metagenome

text: Polluted Polar Coastal Sediments


text: UCSDMI

text: public

text: qiita_sid_1198:1198.ARG06.ORi08.InfralitoralC

text: TRUE

text: marine sediment metagenome

characteristic: common name

text: GAZ:Argentina

characteristic: country

characteristic: depth

text: marine sediment metagenome

characteristic: description

text: TRUE

characteristic: elevation

text: marine benthic biome

characteristic: env biome

text: contaminated sediment

characteristic: env feature

text: marine sediment

characteristic: env matter

text: sediment

characteristic: env package

text: marine sediment

text: TRUE

characteristic: extracted DNA avail now

text: Argentina

characteristic: geo loc name

characteristic: host subject id

text: marine sediment metagenome

text: LBNL

text: TRUE

text: TRUE

text: completed

text: marine sediment

characteristic: sample type

text: Sequenced (16S)

text: marine sediment metagenome

characteristic: title

text: Polluted Polar Coastal Sediments


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_1198:1198.NOR01.STA1.CORE1.1of4

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: TRUE

text: marine sediment metagenome

text: GAZ:Norway

text: marine sediment metagenome

text: TRUE

text: marine benthic biome

text: contaminated sediment

text: marine sediment

text: sediment

text: marine sediment

text: TRUE

text: Norway

characteristic: latitude

text: marine sediment metagenome

characteristic: organism

text: LBNL

text: TRUE

text: TRUE

text: completed

text: marine sediment

text: Sequenced (16S)

text: marine sediment metagenome

text: Polluted Polar Coastal Sediments


text: UCSDMI

text: public

text: qiita_sid_1198:1198.NOR02.STA1.CORE1.2of4

text: TRUE

text: marine sediment metagenome

characteristic: common name

text: GAZ:Norway

characteristic: country

characteristic: depth

text: marine sediment metagenome

characteristic: description

text: TRUE

characteristic: elevation

text: marine benthic biome

characteristic: env biome

text: contaminated sediment

characteristic: env feature

text: marine sediment

characteristic: env matter

text: sediment

characteristic: env package

text: marine sediment

text: TRUE

characteristic: extracted DNA avail now

text: Norway

characteristic: geo loc name

characteristic: host subject id

characteristic: longitude

text: marine sediment metagenome

text: LBNL

text: TRUE

text: TRUE

characteristic: public

text: completed

text: marine sediment

text: Sequenced (16S)

text: marine sediment metagenome

text: Polluted Polar Coastal Sediments


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_1198:1198.NOR03.STA1.CORE1.3of4

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: TRUE

text: marine sediment metagenome

text: GAZ:Norway

text: marine sediment metagenome

text: TRUE

text: marine benthic biome

text: contaminated sediment

text: marine sediment

text: sediment

text: marine sediment

text: TRUE

text: Norway

text: marine sediment metagenome

text: LBNL

text: TRUE

text: TRUE

text: completed

text: marine sediment

characteristic: sample type

text: Sequenced (16S)

text: marine sediment metagenome

characteristic: title

text: Polluted Polar Coastal Sediments


text: UCSDMI

text: public

text: qiita_sid_1198:1198.NOR04.STA1.CORE1.4of4

text: TRUE

text: marine sediment metagenome

characteristic: common name

text: GAZ:Norway

characteristic: country

characteristic: depth

text: marine sediment metagenome

characteristic: description

text: TRUE

characteristic: elevation

text: marine benthic biome

characteristic: env biome

text: contaminated sediment

characteristic: env feature

text: marine sediment

characteristic: env matter

text: sediment

characteristic: env package

text: marine sediment

text: TRUE

characteristic: extracted DNA avail now

text: Norway

characteristic: geo loc name

characteristic: host subject id

characteristic: latitude

text: marine sediment metagenome

characteristic: organism

text: LBNL

text: TRUE

text: TRUE

text: completed

text: marine sediment

text: Sequenced (16S)

text: marine sediment metagenome

text: Polluted Polar Coastal Sediments


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_1198:1198.NOR05.STA1.CORE2.1of3

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: TRUE

text: marine sediment metagenome

text: GAZ:Norway

text: marine sediment metagenome

text: TRUE

text: marine benthic biome

text: contaminated sediment

text: marine sediment

text: sediment

text: marine sediment

text: TRUE

text: Norway

characteristic: longitude

text: marine sediment metagenome

text: LBNL

text: TRUE

text: TRUE

characteristic: public

text: completed

text: marine sediment

text: Sequenced (16S)

text: marine sediment metagenome

text: Polluted Polar Coastal Sediments


text: UCSDMI

text: public

text: qiita_sid_1198:1198.NOR06.STA1.CORE2.2of3

text: TRUE

text: marine sediment metagenome

characteristic: common name

text: GAZ:Norway

characteristic: country

characteristic: depth

text: marine sediment metagenome

characteristic: description

text: TRUE

characteristic: elevation

text: marine benthic biome

characteristic: env biome

text: contaminated sediment

characteristic: env feature

text: marine sediment

characteristic: env matter

text: sediment

characteristic: env package

text: marine sediment

text: TRUE

characteristic: extracted DNA avail now

text: Norway

characteristic: geo loc name

characteristic: host subject id

text: marine sediment metagenome

text: LBNL

text: TRUE

text: TRUE

text: completed

text: marine sediment

characteristic: sample type

text: Sequenced (16S)

text: marine sediment metagenome

characteristic: title

text: Polluted Polar Coastal Sediments


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_1198:1198.NOR07.STA1.CORE2.3of3

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: TRUE

text: marine sediment metagenome

text: GAZ:Norway

text: marine sediment metagenome

text: TRUE

text: marine benthic biome

text: contaminated sediment

text: marine sediment

text: sediment

text: marine sediment

text: TRUE

text: Norway

characteristic: latitude

text: marine sediment metagenome

characteristic: organism

text: LBNL

text: TRUE

text: TRUE

text: completed

text: marine sediment

text: Sequenced (16S)

text: marine sediment metagenome

text: Polluted Polar Coastal Sediments


text: UCSDMI

text: public

text: qiita_sid_1198:1198.NOR08.STA1.CORE3.1of3

text: TRUE

text: marine sediment metagenome

characteristic: common name

text: GAZ:Norway

characteristic: country

characteristic: depth

text: marine sediment metagenome

characteristic: description

text: TRUE

characteristic: elevation

text: marine benthic biome

characteristic: env biome

text: contaminated sediment

characteristic: env feature

text: marine sediment

characteristic: env matter

text: sediment

characteristic: env package

text: marine sediment

text: TRUE

characteristic: extracted DNA avail now

text: Norway

characteristic: geo loc name

characteristic: host subject id

characteristic: longitude

text: marine sediment metagenome

text: LBNL

text: TRUE

text: TRUE

characteristic: public

text: completed

text: marine sediment

text: Sequenced (16S)

text: marine sediment metagenome

text: Polluted Polar Coastal Sediments


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_1198:1198.NOR09.STA1.CORE3.2of3

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: TRUE

text: marine sediment metagenome

text: GAZ:Norway

text: marine sediment metagenome

text: TRUE

text: marine benthic biome

text: contaminated sediment

text: marine sediment

text: sediment

text: marine sediment

text: TRUE

text: Norway

text: marine sediment metagenome

text: LBNL

text: TRUE

text: TRUE

text: completed

text: marine sediment

characteristic: sample type

text: Sequenced (16S)

text: marine sediment metagenome

characteristic: title

text: Polluted Polar Coastal Sediments


text: UCSDMI

text: public

text: qiita_sid_1198:1198.NOR10.STA1.CORE3.3of3

text: TRUE

text: marine sediment metagenome

characteristic: common name

text: GAZ:Norway

characteristic: country

characteristic: depth

text: marine sediment metagenome

characteristic: description

text: TRUE

characteristic: elevation

text: marine benthic biome

characteristic: env biome

text: contaminated sediment

characteristic: env feature

text: marine sediment

characteristic: env matter

text: sediment

characteristic: env package

text: marine sediment

text: TRUE

characteristic: extracted DNA avail now

text: Norway

characteristic: geo loc name

characteristic: host subject id

characteristic: latitude

text: marine sediment metagenome

characteristic: organism

text: LBNL

text: TRUE

text: TRUE

text: completed

text: marine sediment

text: Sequenced (16S)

text: marine sediment metagenome

text: Polluted Polar Coastal Sediments


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_1198:1198.NOR11.STA2.CORE1.1of3

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: TRUE

text: marine sediment metagenome

text: GAZ:Norway

text: marine sediment metagenome

text: TRUE

text: marine benthic biome

text: contaminated sediment

text: marine sediment

text: sediment

text: marine sediment

text: TRUE

text: Norway

characteristic: longitude

text: marine sediment metagenome

text: LBNL

text: TRUE

text: TRUE

characteristic: public

text: completed

text: marine sediment

text: Sequenced (16S)

text: marine sediment metagenome

text: Polluted Polar Coastal Sediments


text: UCSDMI

text: public

text: qiita_sid_1198:1198.NOR12.STA2.CORE1.2of3

text: TRUE

text: marine sediment metagenome

characteristic: common name

text: GAZ:Norway

characteristic: country

characteristic: depth

text: marine sediment metagenome

characteristic: description

text: TRUE

characteristic: elevation

text: marine benthic biome

characteristic: env biome

text: contaminated sediment

characteristic: env feature

text: marine sediment

characteristic: env matter

text: sediment

characteristic: env package

text: marine sediment

text: TRUE

characteristic: extracted DNA avail now

text: Norway

characteristic: geo loc name

characteristic: host subject id

text: marine sediment metagenome

text: LBNL

text: TRUE

text: TRUE

text: completed

text: marine sediment

characteristic: sample type

text: Sequenced (16S)

text: marine sediment metagenome

characteristic: title

text: Polluted Polar Coastal Sediments


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_1198:1198.NOR13.STA2.CORE1.3of3

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: TRUE

text: marine sediment metagenome

text: GAZ:Norway

text: marine sediment metagenome

text: TRUE

text: marine benthic biome

text: contaminated sediment

text: marine sediment

text: sediment

text: marine sediment

text: TRUE

text: Norway

characteristic: latitude

text: marine sediment metagenome

characteristic: organism

text: LBNL

text: TRUE

text: TRUE

text: completed

text: marine sediment

text: Sequenced (16S)

text: marine sediment metagenome

text: Polluted Polar Coastal Sediments


text: UCSDMI

text: public

text: qiita_sid_1198:1198.NOR14.STA2.CORE2.1of3

text: TRUE

text: marine sediment metagenome

characteristic: common name

text: GAZ:Norway

characteristic: country

characteristic: depth

text: marine sediment metagenome

characteristic: description

text: TRUE

characteristic: elevation

text: marine benthic biome

characteristic: env biome

text: contaminated sediment

characteristic: env feature

text: marine sediment

characteristic: env matter

text: sediment

characteristic: env package

text: marine sediment

text: TRUE

characteristic: extracted DNA avail now

text: Norway

characteristic: geo loc name

characteristic: host subject id

characteristic: longitude

text: marine sediment metagenome

text: LBNL

text: TRUE

text: TRUE

characteristic: public

text: completed

text: marine sediment

text: Sequenced (16S)

text: marine sediment metagenome

text: Polluted Polar Coastal Sediments


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_1198:1198.NOR15.STA2.CORE2.2of3

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: TRUE

text: marine sediment metagenome

text: GAZ:Norway

text: marine sediment metagenome

text: TRUE

text: marine benthic biome

text: contaminated sediment

text: marine sediment

text: sediment

text: marine sediment

text: TRUE

text: Norway

text: marine sediment metagenome

text: LBNL

text: TRUE

text: TRUE

text: completed

text: marine sediment

characteristic: sample type

text: Sequenced (16S)

text: marine sediment metagenome

characteristic: title

text: Polluted Polar Coastal Sediments


text: UCSDMI

text: public

text: qiita_sid_1198:1198.NOR16.STA2.CORE2.3of3

text: TRUE

text: marine sediment metagenome

characteristic: common name

text: GAZ:Norway

characteristic: country

characteristic: depth

text: marine sediment metagenome

characteristic: description

text: TRUE

characteristic: elevation

text: marine benthic biome

characteristic: env biome

text: contaminated sediment

characteristic: env feature

text: marine sediment

characteristic: env matter

text: sediment

characteristic: env package

text: marine sediment

text: TRUE

characteristic: extracted DNA avail now

text: Norway

characteristic: geo loc name

characteristic: host subject id

characteristic: latitude

text: marine sediment metagenome

characteristic: organism

text: LBNL

text: TRUE

text: TRUE

text: completed

text: marine sediment

text: Sequenced (16S)

text: marine sediment metagenome

text: Polluted Polar Coastal Sediments


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_1198:1198.NOR17.STA2.CORE3.1of3

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: TRUE

text: marine sediment metagenome

text: GAZ:Norway

text: marine sediment metagenome

text: TRUE

text: marine benthic biome

text: contaminated sediment

text: marine sediment

text: sediment

text: marine sediment

text: TRUE

text: Norway

characteristic: longitude

text: marine sediment metagenome

text: LBNL

text: TRUE

text: TRUE

characteristic: public

text: completed

text: marine sediment

text: Sequenced (16S)

text: marine sediment metagenome

text: Polluted Polar Coastal Sediments


text: UCSDMI

text: public

text: qiita_sid_1198:1198.NOR18.STA2.CORE3.2of3

text: TRUE

text: marine sediment metagenome

characteristic: common name

text: GAZ:Norway

characteristic: country

characteristic: depth

text: marine sediment metagenome

characteristic: description

text: TRUE

characteristic: elevation

text: marine benthic biome

characteristic: env biome

text: contaminated sediment

characteristic: env feature

text: marine sediment

characteristic: env matter

text: sediment

characteristic: env package

text: marine sediment

text: TRUE

characteristic: extracted DNA avail now

text: Norway

characteristic: geo loc name

characteristic: host subject id

text: marine sediment metagenome

text: LBNL

text: TRUE

text: TRUE

text: completed

text: marine sediment

characteristic: sample type

text: Sequenced (16S)

text: marine sediment metagenome

characteristic: title

text: Polluted Polar Coastal Sediments


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_1198:1198.NOR19.STA2.CORE3.3of3

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: TRUE

text: marine sediment metagenome

text: GAZ:Norway

text: marine sediment metagenome

text: TRUE

text: marine benthic biome

text: contaminated sediment

text: marine sediment

text: sediment

text: marine sediment

text: TRUE

text: Norway

characteristic: latitude

text: marine sediment metagenome

characteristic: organism

text: LBNL

text: TRUE

text: TRUE

text: completed

text: marine sediment

text: Sequenced (16S)

text: marine sediment metagenome

text: Polluted Polar Coastal Sediments


text: UCSDMI

text: public

text: TRUE

text: marine sediment metagenome

characteristic: common name

text: GAZ:Sweden

characteristic: country

characteristic: depth

text: marine sediment metagenome

characteristic: description

text: TRUE

characteristic: elevation

text: marine benthic biome

characteristic: env biome

text: contaminated sediment

characteristic: env feature

text: marine sediment

characteristic: env matter

text: sediment

characteristic: env package

text: marine sediment

text: TRUE

characteristic: extracted DNA avail now

text: Sweden

characteristic: geo loc name

characteristic: host subject id

characteristic: longitude

text: marine sediment metagenome

text: LBNL

text: TRUE

text: TRUE

characteristic: public

text: completed

text: marine sediment

text: Sequenced (16S)

text: marine sediment metagenome

text: Polluted Polar Coastal Sediments


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

characteristic: anonymized name

text: TRUE

text: marine sediment metagenome

text: GAZ:Sweden

text: marine sediment metagenome

text: TRUE

text: marine benthic biome

text: contaminated sediment

text: marine sediment

text: sediment

text: marine sediment

text: TRUE

text: Sweden

text: marine sediment metagenome

text: LBNL

text: TRUE

text: TRUE

text: completed

text: marine sediment

characteristic: sample type

text: Sequenced (16S)

text: marine sediment metagenome

text: Polluted Polar Coastal Sediments

characteristic: title


text: UNIVERSITY OF GLASGOW

text: public

tag: Namespace:UNIVERSITY OF GLASGOW

text: [Eubacterium] rectale

characteristic: organism

text: [Eubacterium] rectale


text: public

characteristic: collection date

characteristic: depth

text: the HSOS impacted sediments

characteristic: description

text: coast

characteristic: environment (biome)

text: harbor

characteristic: environment (feature)

text: sediment

characteristic: environment (material)

text: South Korea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: metagenome

text: Oil spill impacted sediments

characteristic: project name

text: metagenome

text: sediment

characteristic: sediment environmental package

text: Ion proton

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: BIOCANT

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Bursaphelenchus mucronatus

text: Bursaphelenchus mucronatus

text: Bursaphelenchus mucronatus whole transcriptome


text: UNIVERSITY OF BAYREUTH

text: public

tag: Namespace:UNIVERSITY OF BAYREUTH

characteristic: collection date

text: soil

characteristic: environment (biome)

text: agricultural soil

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: miscellaneous natural or artificial environment

characteristic: miscellaneous environmental package

text: uncultured archaeon

characteristic: organism

text: CAGCMGCCGCGGTAA, GGCCATGCACCWCCTCTC

characteristic: pcr primers

text: Oxygen shapes trophic interactions of a chitin-degrading soil microbiome

text: uncultured archaeon

text: Illuminasequencing

characteristic: title


Arc-AnOxic-tEnd

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF BAYREUTH

text: public

text: Arc-AnOxic-tEnd

text: soil

text: agricultural soil

text: soil

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: uncultured archaeon

text: CAGCMGCCGCGGTAA, GGCCATGCACCWCCTCTC

characteristic: project name

text: uncultured archaeon

text: Illuminasequencing

characteristic: sequencing method

text: Arc-AnOxic-tEnd


Arc-Oxic-tEnd

characteristic: External Id

text: UNIVERSITY OF BAYREUTH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Arc-Oxic-tEnd

characteristic: Submitter Id

characteristic: collection date

text: soil

text: agricultural soil

text: soil

text: Germany

text: mimarks-survey

text: uncultured archaeon

text: CAGCMGCCGCGGTAA, GGCCATGCACCWCCTCTC

text: uncultured archaeon

text: Illuminasequencing

text: Arc-Oxic-tEnd


text: STATENS SERUM INSTITUT

text: public

tag: Namespace:STATENS SERUM INSTITUT

text: Isolate extracted from patient sample S_110

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: human

characteristic: host scientific name

text: Escherichia coli

characteristic: isolate

text: faeces

characteristic: isolation source

text: 55.6425 N, 12.4754 E

characteristic: lat lon

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: Escherichia coli isolate

characteristic: title


Escherichia_coli-S_110 isolate 2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: STATENS SERUM INSTITUT

text: public

text: Escherichia_coli-S_110 isolate 2

text: Denmark

text: diseased

text: human

text: Escherichia coli

text: faeces

text: 55.6425 N, 12.4754 E

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli isolate


text: STATENS SERUM INSTITUT

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Isolate extracted from patient sample S_130

text: Denmark

text: diseased

text: human

text: Escherichia coli

text: faeces

text: 55.6425 N, 12.4754 E

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli isolate


text: STATENS SERUM INSTITUT

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Isolate extracted from patient sample S_132

characteristic: description

text: Denmark

text: diseased

text: human

text: Escherichia coli

text: faeces

text: 55.6425 N, 12.4754 E

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli isolate


text: STATENS SERUM INSTITUT

text: public

text: Isolate extracted from patient sample S_140

text: Denmark

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: human

characteristic: host scientific name

text: Escherichia coli

characteristic: isolate

text: faeces

text: 55.6425 N, 12.4754 E

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli isolate


text: STATENS SERUM INSTITUT

text: public

text: Isolate extracted from patient sample S_141

text: Denmark

text: diseased

text: human

text: Escherichia coli

text: faeces

characteristic: isolation source

text: 55.6425 N, 12.4754 E

characteristic: lat lon

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: Escherichia coli isolate

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: STATENS SERUM INSTITUT

text: public

text: Isolate extracted from patient sample S_142

text: Denmark

text: diseased

text: human

text: Escherichia coli

text: faeces

text: 55.6425 N, 12.4754 E

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli isolate


text: STATENS SERUM INSTITUT

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Isolate extracted from patient sample S_145

text: Denmark

text: diseased

text: human

text: Escherichia coli

text: faeces

text: 55.6425 N, 12.4754 E

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli isolate


text: STATENS SERUM INSTITUT

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Isolate extracted from patient sample S_148

characteristic: description

text: Denmark

text: diseased

text: human

text: Escherichia coli

text: faeces

text: 55.6425 N, 12.4754 E

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli isolate


text: STATENS SERUM INSTITUT

text: public

text: Isolate extracted from patient sample S_151

text: Denmark

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: human

characteristic: host scientific name

text: Escherichia coli

characteristic: isolate

text: faeces

text: 55.6425 N, 12.4754 E

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli isolate


text: STATENS SERUM INSTITUT

text: public

text: Isolate extracted from patient sample S_153

text: Denmark

text: diseased

text: human

text: Escherichia coli

text: faeces

characteristic: isolation source

text: 55.6425 N, 12.4754 E

characteristic: lat lon

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: Escherichia coli isolate

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: STATENS SERUM INSTITUT

text: public

text: Isolate extracted from patient sample S_154

text: Denmark

text: diseased

text: human

text: Escherichia coli

text: faeces

text: 55.6425 N, 12.4754 E

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli isolate


Escherichia_coli-S_154 isolate 2

text: STATENS SERUM INSTITUT

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Escherichia_coli-S_154 isolate 2

text: Denmark

text: diseased

text: human

text: Escherichia coli

text: faeces

text: 55.6425 N, 12.4754 E

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli isolate


text: STATENS SERUM INSTITUT

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Isolate extracted from patient sample S_156

characteristic: description

text: Denmark

text: diseased

text: human

text: Escherichia coli

text: faeces

text: 55.6425 N, 12.4754 E

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli isolate


Escherichia_coli-S_156 isolate 2

text: STATENS SERUM INSTITUT

text: public

text: Escherichia_coli-S_156 isolate 2

text: Denmark

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: human

characteristic: host scientific name

text: Escherichia coli

characteristic: isolate

text: faeces

text: 55.6425 N, 12.4754 E

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli isolate


text: STATENS SERUM INSTITUT

text: public

text: Isolate extracted from patient sample S_157

text: Denmark

text: diseased

text: human

text: Escherichia coli

text: faeces

characteristic: isolation source

text: 55.6425 N, 12.4754 E

characteristic: lat lon

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: Escherichia coli isolate

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: STATENS SERUM INSTITUT

text: public

text: Isolate extracted from patient sample S_158

text: Denmark

text: diseased

text: human

text: Escherichia coli

text: faeces

text: 55.6425 N, 12.4754 E

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli isolate


text: STATENS SERUM INSTITUT

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Isolate extracted from patient sample S_159

text: Denmark

text: diseased

text: human

text: Escherichia coli

text: faeces

text: 55.6425 N, 12.4754 E

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli isolate


text: STATENS SERUM INSTITUT

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: Denmark

text: diseased

text: human

text: Escherichia albertii

text: faeces

text: 55.6425 N, 12.4754 E

text: Escherichia albertii

text: Escherichia albertii

text: Escherichia albertii isolate


text: STATENS SERUM INSTITUT

text: public

text: Isolate extracted from patient sample S_149

text: Denmark

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: human

characteristic: host scientific name

text: Providencia alcalifaciens

characteristic: isolate

text: faeces

text: 55.6425 N, 12.4754 E

text: Providencia alcalifaciens

text: Providencia alcalifaciens

text: Providencia alcalifaciens isolate


text: STATENS SERUM INSTITUT

text: public

text: Salmonella_enterica_serovar_Enteritidis-S_127

text: Isolate extracted from patient sample S_127

text: Denmark

text: diseased

text: human

text: Salmonella Enteritidis

text: faeces

characteristic: isolation source

text: 55.6425 N, 12.4754 E

characteristic: lat lon

text: Salmonella enterica subsp. enterica serovar Enteritidis

characteristic: organism

text: Enteritidis

characteristic: serovar

text: Salmonella Enteritidis isolate

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: STATENS SERUM INSTITUT

characteristic: INSDC center name

text: public

text: Salmonella_enterica_serovar_Enteritidis-S_128

text: Isolate extracted from patient sample S_128

text: Denmark

text: diseased

text: human

text: Salmonella Enteritidis

text: faeces

text: 55.6425 N, 12.4754 E

text: Enteritidis

text: Salmonella Enteritidis isolate


text: STATENS SERUM INSTITUT

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Salmonella_enterica_serovar_Enteritidis-S_153

characteristic: Submitter Id

text: Isolate extracted from patient sample S_129

text: Denmark

text: diseased

text: human

text: Salmonella Enteritidis

text: faeces

text: 55.6425 N, 12.4754 E

text: Enteritidis

text: Salmonella Enteritidis isolate


text: STATENS SERUM INSTITUT

text: public

text: Salmonella_enterica_serovar_Thompson-S_126

characteristic: collection date

text: Isolate extracted from patient sample S_130

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: human

characteristic: host scientific name

text: Salmonella Thompson

text: faeces

text: 55.6425 N, 12.4754 E

text: Salmonella enterica

text: Salmonella enterica

text: Thompson

text: Salmonella Thompson isolate


text: STATENS SERUM INSTITUT

text: public

text: Salmonella_enterica_serovar_Typhimurium-S_129

text: Isolate extracted from patient sample S_131

text: Denmark

text: diseased

text: human

text: Salmonella Typhimurium

characteristic: isolate

text: faeces

characteristic: isolation source

text: 55.6425 N, 12.4754 E

characteristic: lat lon

text: Salmonella enterica subsp. enterica serovar Typhimurium

characteristic: organism

text: Typhimurium

characteristic: serovar

text: Salmonella Typhimurium isolate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: STATENS SERUM INSTITUT

text: public

text: Isolate extracted from patient sample S_132

text: Denmark

text: diseased

text: human

text: Shigella flexneri

text: faeces

text: 55.6425 N, 12.4754 E

text: Shigella flexneri

text: Shigella flexneri

text: Shigella flexnerii isolate

characteristic: title


text: STATENS SERUM INSTITUT

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Isolate extracted from patient sample S_133

text: Denmark

text: diseased

text: human

text: Shigella sonnei

text: faeces

text: 55.6425 N, 12.4754 E

text: Shigella sonnei

text: Shigella sonnei

text: Shigella sonnei isolate


text: STATENS SERUM INSTITUT

text: public

characteristic: Submitter Id

characteristic: collection date

text: Isolate extracted from patient sample S_134

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: human

text: Shigella sonnei

text: faeces

text: 55.6425 N, 12.4754 E

text: Shigella sonnei

text: Shigella sonnei

text: Shigella sonnei isolate


text: STATENS SERUM INSTITUT

text: public

text: Isolate extracted from patient sample S_135

text: Denmark

text: diseased

text: human

characteristic: host scientific name

text: Yersinia enterocolitica

characteristic: isolate

text: faeces

characteristic: isolation source

text: 55.6425 N, 12.4754 E

characteristic: lat lon

text: Yersinia enterocolitica

characteristic: organism

text: Yersinia enterocolitica

text: Shigella sonnei isolate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: STATENS SERUM INSTITUT

text: public

text: Isolate extracted from patient sample S_136

text: Denmark

text: diseased

text: human

text: Aeromonas veronii

text: faeces

text: 55.6425 N, 12.4754 E

text: Aeromonas veronii

text: Aeromonas veronii

text: Aeromonas veronii isolate


text: STATENS SERUM INSTITUT

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Isolate extracted from patient sample S_137

text: Denmark

text: diseased

text: human

text: Campylobacter jejuni

text: faeces

text: 55.6425 N, 12.4754 E

text: Campylobacter jejuni

text: Campylobacter jejuni

text: Campylobacter jejuni isolate

characteristic: title


text: STATENS SERUM INSTITUT

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Isolate extracted from patient sample S_138

text: Denmark

text: diseased

text: human

text: Campylobacter jejuni

text: faeces

text: 55.6425 N, 12.4754 E

text: Campylobacter jejuni

text: Campylobacter jejuni

text: Campylobacter jejuni isolate


text: STATENS SERUM INSTITUT

text: public

text: Isolate extracted from patient sample S_139

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: human

characteristic: host scientific name

text: Campylobacter jejuni

text: faeces

text: 55.6425 N, 12.4754 E

text: Campylobacter jejuni

text: Campylobacter jejuni

text: Campylobacter jejuni isolate


text: STATENS SERUM INSTITUT

text: public

text: Isolate extracted from patient sample S_140

text: Denmark

text: diseased

text: human

text: Campylobacter jejuni

characteristic: isolate

text: faeces

characteristic: isolation source

text: 55.6425 N, 12.4754 E

characteristic: lat lon

text: Campylobacter jejuni

characteristic: organism

text: Campylobacter jejuni

text: Campylobacter jejuni isolate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: STATENS SERUM INSTITUT

text: public

text: Isolate extracted from patient sample S_141

text: Denmark

text: diseased

text: human

text: Clostridium difficile

text: faeces

text: 55.6425 N, 12.4754 E

text: Clostridioides difficile

text: Clostridioides difficile

text: Clostridium difficile isolate


text: STATENS SERUM INSTITUT

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Isolate extracted from patient sample S_142

text: Denmark

text: diseased

text: human

text: Clostridium difficile

text: faeces

text: 55.6425 N, 12.4754 E

text: Clostridioides difficile

text: Clostridioides difficile

text: Clostridium difficile isolate

characteristic: title


text: STATENS SERUM INSTITUT

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Isolate extracted from patient sample S_143

text: Denmark

text: diseased

text: human

text: Clostridium difficile

text: faeces

text: 55.6425 N, 12.4754 E

text: Clostridioides difficile

text: Clostridioides difficile

text: Clostridium difficile isolate


text: STATENS SERUM INSTITUT

text: public

text: Isolate extracted from patient sample S_144

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: human

characteristic: host scientific name

text: Clostridium difficile

text: faeces

text: 55.6425 N, 12.4754 E

text: Clostridioides difficile

text: Clostridioides difficile

text: Clostridium difficile isolate


text: STATENS SERUM INSTITUT

text: public

text: Isolate extracted from patient sample S_145

text: Denmark

text: diseased

text: human

text: Clostridium difficile

characteristic: isolate

text: faeces

characteristic: isolation source

text: 55.6425 N, 12.4754 E

characteristic: lat lon

text: Clostridioides difficile

characteristic: organism

text: Clostridioides difficile

text: Clostridium difficile isolate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: STATENS SERUM INSTITUT

text: public

text: Isolate extracted from patient sample S_146

text: Denmark

text: diseased

text: human

text: Clostridium difficile

text: faeces

text: 55.6425 N, 12.4754 E

text: Clostridioides difficile

text: Clostridioides difficile

text: Clostridium difficile isolate


text: STATENS SERUM INSTITUT

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Isolate extracted from patient sample S_147

text: Denmark

text: diseased

text: human

text: Clostridium difficile

text: faeces

text: 55.6425 N, 12.4754 E

text: Clostridioides difficile

text: Clostridioides difficile

text: Clostridium difficile isolate

characteristic: title


text: STATENS SERUM INSTITUT

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Isolate extracted from patient sample S_148

text: Denmark

text: diseased

text: human

text: Clostridium difficile

text: faeces

text: 55.6425 N, 12.4754 E

text: Clostridioides difficile

text: Clostridioides difficile

text: Clostridium difficile isolate


text: STATENS SERUM INSTITUT

text: public

text: Isolate extracted from patient sample S_149

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: human

characteristic: host scientific name

text: Clostridium difficile

text: faeces

text: 55.6425 N, 12.4754 E

text: Clostridioides difficile

text: Clostridioides difficile

text: Clostridium difficile isolate


text: STATENS SERUM INSTITUT

text: public

text: Isolate extracted from patient sample S_150

text: Denmark

text: diseased

text: human

text: Clostridium difficile

characteristic: isolate

text: faeces

characteristic: isolation source

text: 55.6425 N, 12.4754 E

characteristic: lat lon

text: Clostridioides difficile

characteristic: organism

text: Clostridioides difficile

text: Clostridium difficile isolate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: STATENS SERUM INSTITUT

text: public

text: Isolate extracted from patient sample S_151

text: Denmark

text: diseased

text: human

text: Clostridium difficile

text: faeces

text: 55.6425 N, 12.4754 E

text: Clostridioides difficile

text: Clostridioides difficile

text: Clostridium difficile isolate


text: STATENS SERUM INSTITUT

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Isolate extracted from patient sample S_152

text: Denmark

text: diseased

text: human

text: Clostridium difficile

text: faeces

text: 55.6425 N, 12.4754 E

text: Clostridioides difficile

text: Clostridioides difficile

text: Clostridium difficile isolate

characteristic: title


text: STATENS SERUM INSTITUT

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Isolate extracted from patient sample S_153

text: Denmark

text: diseased

text: human

text: Clostridium difficile

text: faeces

text: 55.6425 N, 12.4754 E

text: Clostridioides difficile

text: Clostridioides difficile

text: Clostridium difficile isolate


text: CBMSO

text: public

text: SCD6 and Rasputin are two RNA binding proteins of the parasite Leishmania braziliensis. The main interest is to know at which RNA they bind. To achieve this task, SCD6-RNA and Rasputin-SCD6 complexes were immunoprecipitated,using antibodies against each of these proteins, starting from a parasite extract (cells lysed by sonication). In parallel, immunoprecipitation with the pre-immune sera was carried out as control of non specific binding (there are two control, preRasputin and preSCD6). Once the complexes were obtained, proteins were removed and the RNA was concentrated by ethanol precipitation. As the amount of RNA was undetectable,the TransPlex® Whole Transcriptome Amplification Kit (Sigma-Aldrich) system1 were used to generate cDNA and then amplified by PCR to obtain enough mass of cDNA to perform further steps of NGS analysis. There is no accurate data on the nucleotide sequence that the kit incorporates in PCR stage

characteristic: description

text: Leishmania braziliensis MHOM/BR/75/M2904


text: CBMSO

text: public

text: SCD6 and Rasputin are two RNA binding proteins of the parasite Leishmania braziliensis. The main interest is to know at which RNA they bind.


text: Friedrich-Loeffler-Institute

text: public

text: National Diagnostic and Research Veterinary Medical Institute (NDRVMI), Exotic and Emerging Diseases, Sofia, Bulgaria

characteristic: collecting institution

text: Simona Tchakarova

characteristic: collector name

text: Aquatic bird bornavirus 1

characteristic: common name

text: 412-2 - Nr. 4

text: Bulgaria

characteristic: geographic location (country and/or sea)

text: Mute swan

characteristic: host common name

text: diseased

characteristic: host health state

text: Cygnus olor

characteristic: host scientific name

text: not collected

characteristic: host sex

text: 412-2 - Nr. 4

characteristic: host subject id

text: 412-2 - Nr. 4

characteristic: isolate

text: brain

characteristic: isolation source host associated

text: Aquatic bird bornavirus 1

text: Aquatic bird bornavirus 1

text: 412-2 - Nr. 4


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTER FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:HELMHOLTZ CENTER FOR INFECTION RESEARCH

text: metagenome

characteristic: organism

text: metagenome

characteristic: title


text: IPK-Gatersleben

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: thale cress

characteristic: common name

text: WT

characteristic: description

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: WT


text: IPK-Gatersleben

text: public

text: thale cress

text: et1 seedlings

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: et1-1 seedlings


text: IPK-Gatersleben

text: public

text: thale cress

text: et2 seedlings

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: et2-3 seedlings


text: IPK-Gatersleben

text: public

text: thale cress

text: et1-1/et2-3 seedlings

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: et1-1/et2-3 seedlings


text: public

tag: Namespace:Vesalius Research Center, VIB Department of Oncology, KU Leuven

text: ArrayExpress

characteristic: broker name

text: house mouse

text: Protocols: Subventricular zone (SVZ) tissue and meninges tissue was isolated from postnatal day 0 (P0) mice and processed for RNA preparation (SVZ-bulk and meninges-bulk, respectively). Prominin-positive cells were isolated from P0 SVZ tissue, grown to neurospheres in suspension culture (SVZ-prominin neurospheres) and used for RNA extraction. Similarly, PDGFRb-positive cells from meninges tissue were grown in suspension cultures to PDGFRb-neurospheres, which were then used for RNA extraction. RNA was extracted using TRIzol (Life Technologies). Starting from total RNA, poly-adenylated fragments were isolated, reverse transcribed and converted into indexed sequencing libraries using the KAPA stranded mRNA-seq kit (Sopachem, Eke, Belgium).

text: homogenized meningeal tissue

characteristic: fraction

text: Mus musculus

text: Mus musculus

text: subventricular zone

characteristic: organism part

text: Mus musculus


characteristic: ENA-CHECKLIST

text: Vesalius Research Center, VIB Department of Oncology, KU Leuven

text: public

text: ArrayExpress

text: house mouse

text: neuronal cell types (heterogeneous)

text: Mus musculus

text: Mus musculus

text: subventricular zone

text: Mus musculus


characteristic: ENA-FIRST-PUBLIC

text: public

text: ArrayExpress

text: house mouse

text: homogenized meningeal tissue

text: Mus musculus

text: Mus musculus

text: subventricular zone

text: Mus musculus


characteristic: ENA-LAST-UPDATE

text: public

text: ArrayExpress

text: house mouse

text: homogenized subventricular zone tissue (mix of cell types)

text: Mus musculus

text: Mus musculus

text: subventricular zone

text: Mus musculus


characteristic: External Id

text: public

tag: Namespace:Center for Genome Sciences & Systems Biology

text: gut microbiota

text: metagenome

text: metagenome

text: Mouse fecal bacterial COPRO-Seq shotgun sequencing datasets


text: Center for Genome Sciences & Systems Biology

characteristic: INSDC center name

text: public

text: gut microbiota

text: metagenome

text: metagenome


text: LEIDEN UNIVERSITY MEDICAL CENTER

characteristic: INSDC first public

text: public

tag: Namespace:LEIDEN UNIVERSITY MEDICAL CENTER

characteristic: collection date

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: Netherlands

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-skin

characteristic: human skin environmental package

text: metagenome

characteristic: investigation type

text: synthetic metagenome

text: Artificial mix of real bacterial sequences

characteristic: project name

text: synthetic metagenome

text: MiSeq

characteristic: sequencing method

text: artificial mix, real sequences, even representation


characteristic: ENA-CHECKLIST

text: INSTITUTO DE INVESTIGACION LIGHTBOURN

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:INSTITUTO DE INVESTIGACION LIGHTBOURN

characteristic: Submitter Id

text: soil metagenome

characteristic: organism

text: soil metagenome

text: Muestra 1

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIBE-IG

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: horse

characteristic: common name

text: German Warmblood

characteristic: description

text: Equus caballus

text: Equus caballus

text: German WarmBlood


text: UNIVERSITY OF DELHI

text: public

characteristic: collection date

characteristic: depth

text: Terrestrial Biome

characteristic: environment (biome)

text: Habitat

characteristic: environment (feature)

text: Sediment

characteristic: environment (material)

text: India

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sediment metagenome

text: Metagenomic analysis of sediment (MNS3) of Manikaran hot springs

text: sediment metagenome

text: sediment

characteristic: sediment environmental package

text: Illumina


text: Mouse

characteristic: ArrayExpress-Phenotype

text: Mus musculus

characteristic: ArrayExpress-Species

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: house mouse

text: Mus musculus

characteristic: organism

text: Mus musculus

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:INSTITUTE OF SOIL SCIENCE, CHINESE ACADEMY OF SCIE

characteristic: collection date

characteristic: depth

text: soil

characteristic: environment (biome)

text: close to a large smelter and a fertilizer plant

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

text: 28° 19’ 44”

text: 117° 12’ 35”

text: metagenome

text: soil metagenome

characteristic: project name

text: soil metagenome

text: miseq

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: control


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: INSTITUTE OF SOIL SCIENCE, CHINESE ACADEMY OF SCIE

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: soil

text: soil

text: China

characteristic: geographic location (elevation)

text: 28° 19’ 44”

characteristic: geographic location (latitude)

text: 117° 12’ 35”

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: soil metagenome

text: soil metagenome

text: miseq

text: soil

text: control


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: depth

text: soil

text: soil

text: China

text: 28° 19’ 44”

text: 117° 12’ 35”

text: metagenome

text: soil metagenome

characteristic: organism

text: soil metagenome

text: miseq

text: soil

text: fungi control

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: soil

characteristic: environment (biome)

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

text: 28° 19’ 44”

text: 117° 12’ 35”

text: metagenome

text: soil metagenome

characteristic: project name

text: soil metagenome

text: miseq

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: alkali slag


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: soil

text: soil

text: China

characteristic: geographic location (elevation)

text: 28° 19’ 44”

characteristic: geographic location (latitude)

text: 117° 12’ 35”

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: soil metagenome

text: soil metagenome

text: miseq

text: soil

text: fungi alkali slag


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: depth

text: soil

text: soil

text: China

text: 28° 19’ 44”

text: 117° 12’ 35”

text: metagenome

text: soil metagenome

characteristic: organism

text: soil metagenome

text: miseq

text: soil

text: lime

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: soil

characteristic: environment (biome)

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

text: 28° 19’ 44”

text: 117° 12’ 35”

text: metagenome

text: soil metagenome

characteristic: project name

text: soil metagenome

text: miseq

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: fungi lime


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: soil

text: soil

text: China

characteristic: geographic location (elevation)

text: 28° 19’ 44”

characteristic: geographic location (latitude)

text: 117° 12’ 35”

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: soil metagenome

text: soil metagenome

text: miseq

text: soil

text: apatite


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: depth

text: soil

text: soil

text: China

text: 28° 19’ 44”

text: 117° 12’ 35”

text: metagenome

text: soil metagenome

characteristic: organism

text: soil metagenome

text: miseq

text: soil

text: fungi apatite

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: soil

characteristic: environment (biome)

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

text: 28° 19’ 44”

text: 117° 12’ 35”

text: metagenome

text: soil metagenome

characteristic: project name

text: soil metagenome

text: miseq

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: micro-hydroxapatite


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: soil

text: soil

text: China

characteristic: geographic location (elevation)

text: 28° 19’ 44”

characteristic: geographic location (latitude)

text: 117° 12’ 35”

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: soil metagenome

text: soil metagenome

text: miseq

text: soil

text: fungi micro-hydroxapatite


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: depth

text: soil

text: soil

text: China

text: 28° 19’ 44”

text: 117° 12’ 35”

text: metagenome

text: soil metagenome

characteristic: organism

text: soil metagenome

text: miseq

text: soil

text: nano-hydroxapatite

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: soil

characteristic: environment (biome)

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

text: 28° 19’ 44”

text: 117° 12’ 35”

text: metagenome

text: soil metagenome

characteristic: project name

text: soil metagenome

text: miseq

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: fungi nano-hydroxapatite


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: NTNU

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Latitude End

characteristic: Longitude End

text: Incubations of oil accommodated sea-water.

characteristic: description

text: Marine biome

text: Fjord

text: Water

text: water

characteristic: environmental package

text: 2014-07-20T08:00:00Z/2014-07-20T09:00:00Z

characteristic: event date/time

characteristic: latitude start

characteristic: longitude start

text: Norwegian sea

characteristic: marine region

text: marine metagenome

text: PETROMAKS

text: Incubation

characteristic: protocol label

unit: practical salinity unit

characteristic: salinity

characteristic: sampling campaign

text: Underwater pipeline

characteristic: sampling platform

characteristic: sampling site

text: marine metagenome

unit: ºC

characteristic: temperature


Ebola virus Makona isolate Frankfurt

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institute for Medical Microbiology

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: Ebola virus Makona isolate Frankfurt

tag: Namespace:Institute for Medical Microbiology

characteristic: Submitter Id

text: Department of Medicine, Infectious Diseases Unit, University Hospital Frankfurt, Frankfurt/Main, Germany

characteristic: collecting institution

characteristic: collection date

text: Infectious Diseases Unit

characteristic: collector name

text: Complete genome sequence of an Ebola virus isolate from an imported case in Germany ex Sierra Leone determined by circle sequencing (Cir-seq)

text: Germany

characteristic: geographic location (country and/or sea)

text: Frankfurt/Main

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: H. sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

characteristic: host subject id

text: Ebola virus Makona isolate Frankfurt

characteristic: isolate

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text: Metagenomics reveals sediment microbial community response to Deepwater Horizon oil spill

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text: UCSDMI

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text: UCSDMI

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characteristic: External Id

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text: qiita_sid_1197:1197.SE.20100926.GY.NF.010.BC.053

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text: marine sediment metagenome

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