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characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: chemical administration

characteristic: collection date

text: Pacific oyster

characteristic: common name

characteristic: description

text: aquatic marine benthic coastal

characteristic: environment (biome)

text: organic

characteristic: environment (feature)

text: organic material

characteristic: environment (material)

text: North Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: mantle

characteristic: host body habitat

text: mantle

characteristic: host body site

text: Pacific oyster

text: adult

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: f: CCATCGAA; r: TCTCGTCA

text: Crassostrea gigas

characteristic: project name

text: scalpel

text: Crassostrea gigas

characteristic: sequencing method

text: 16s rRNA

text: Pacific oyster mantle microbiota antibiotic treated not translocated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Pacific oyster

text: aquatic marine benthic coastal

text: organic

text: organic material

text: North Sea

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text: mantle

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characteristic: host common name

text: adult

characteristic: host life stage

characteristic: host subject id

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characteristic: host-associated environmental package

text: mimarks-survey

text: f: CCATCGAA; r: ACAGCTCA

characteristic: multiplex identifiers

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characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

characteristic: perturbation

text: scalpel

characteristic: sample collection device or method

characteristic: sample volume or weight for DNA extraction

text: Crassostrea gigas

text: 16s rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: temperature

text: Pacific oyster mantle microbiota treated with None translocated

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: chemical administration

characteristic: collection date

text: Pacific oyster

characteristic: common name

text: Pacific oyster (Crassostrea gigas) mantle microbiota; collected 06-Jun-2012; antibiotic treated not translocated (Sylt D); samples taken 5 days after deployment

characteristic: description

text: aquatic marine benthic coastal

characteristic: environment (biome)

text: organic

characteristic: environment (feature)

text: organic material

characteristic: environment (material)

text: North Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: mantle

characteristic: host body habitat

text: mantle

characteristic: host body site

text: Pacific oyster

text: adult

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: f: GACTTCAG; r: CGTTGGAT

text: Crassostrea gigas

characteristic: project name

text: scalpel

text: Crassostrea gigas

characteristic: sequencing method

text: 16s rRNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Pacific oyster

text: Pacific oyster (Crassostrea gigas) mantle microbiota; collected 06-Jun-2012; antibiotic treated translocated from Texel (NL) to Sylt (D); samples taken 5 days after deployment

text: aquatic marine benthic coastal

text: organic

text: organic material

text: North Sea

text: mantle

text: mantle

text: Pacific oyster

characteristic: host common name

text: adult

characteristic: host life stage

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: f: GACTTCAG; r: CGTTAAGC

characteristic: multiplex identifiers

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characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

characteristic: perturbation

text: scalpel

characteristic: sample collection device or method

characteristic: sample volume or weight for DNA extraction

text: Crassostrea gigas

text: 16s rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: temperature

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: chemical administration

characteristic: collection date

text: Pacific oyster

characteristic: common name

characteristic: description

text: aquatic marine benthic coastal

characteristic: environment (biome)

text: organic

characteristic: environment (feature)

text: organic material

characteristic: environment (material)

text: North Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: mantle

characteristic: host body habitat

text: mantle

characteristic: host body site

text: Pacific oyster

text: adult

text: host-associated

text: mimarks-survey

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characteristic: project name

text: scalpel

text: Crassostrea gigas

characteristic: sequencing method

text: 16s rRNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

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text: Pacific oyster

text: aquatic marine benthic coastal

text: organic

text: organic material

text: North Sea

text: mantle

text: mantle

text: Pacific oyster

characteristic: host common name

text: adult

characteristic: host life stage

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

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characteristic: multiplex identifiers

text: Crassostrea gigas

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

characteristic: perturbation

text: scalpel

characteristic: sample collection device or method

characteristic: sample volume or weight for DNA extraction

text: Crassostrea gigas

text: 16s rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: temperature

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: chemical administration

characteristic: collection date

text: Pacific oyster

characteristic: common name

characteristic: description

text: aquatic marine benthic coastal

characteristic: environment (biome)

text: organic

characteristic: environment (feature)

text: organic material

characteristic: environment (material)

text: North Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: mantle

characteristic: host body habitat

text: mantle

characteristic: host body site

text: Pacific oyster

text: adult

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: f: GACTTCAG; r: GCATTAGC

text: Crassostrea gigas

characteristic: project name

text: scalpel

text: Crassostrea gigas

characteristic: sequencing method

text: 16s rRNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Pacific oyster

text: aquatic marine benthic coastal

text: organic

text: organic material

text: North Sea

text: mantle

text: mantle

text: Pacific oyster

characteristic: host common name

text: adult

characteristic: host life stage

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

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text: f: GACTTCAG; r: TGTGGACT

characteristic: multiplex identifiers

text: Crassostrea gigas

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

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text: scalpel

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text: Crassostrea gigas

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characteristic: target gene

characteristic: target subfragment

characteristic: temperature

characteristic: title


characteristic: ENA-CHECKLIST

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characteristic: External Id

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Pacific oyster

characteristic: common name

text: Pacific oyster (Crassostrea gigas) mantle microbiota; collected 06-Jun-2012; treated with None not translocated (Sylt D); samples taken 5 days after deployment

characteristic: description

text: aquatic marine benthic coastal

characteristic: environment (biome)

text: organic

characteristic: environment (feature)

text: organic material

characteristic: environment (material)

text: North Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: mantle

characteristic: host body habitat

text: mantle

characteristic: host body site

text: Pacific oyster

text: adult

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: f: GGCCATAT; r: TGTGGACT

text: Crassostrea gigas

characteristic: project name

text: scalpel

text: Crassostrea gigas

characteristic: sequencing method

text: 16s rRNA

text: Pacific oyster mantle microbiota treated with None not translocated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Pacific oyster

text: aquatic marine benthic coastal

text: organic

text: organic material

text: North Sea

text: mantle

text: mantle

text: Pacific oyster

characteristic: host common name

text: adult

characteristic: host life stage

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: f: ACGATCGT; r: TCTCGTCA

characteristic: multiplex identifiers

text: Crassostrea gigas

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: treated with None not translocated (Sylt D)

characteristic: perturbation

text: scalpel

characteristic: sample collection device or method

characteristic: sample volume or weight for DNA extraction

text: Crassostrea gigas

text: 16s rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: temperature

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Pacific oyster

characteristic: common name

characteristic: description

text: aquatic marine benthic coastal

characteristic: environment (biome)

text: organic

characteristic: environment (feature)

text: organic material

characteristic: environment (material)

text: North Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: mantle

characteristic: host body habitat

text: mantle

characteristic: host body site

text: Pacific oyster

text: adult

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: f: ACGATCGT; r: CGTTGGAT

text: Crassostrea gigas

characteristic: project name

text: scalpel

text: Crassostrea gigas

characteristic: sequencing method

text: 16s rRNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Pacific oyster

text: aquatic marine benthic coastal

text: organic

text: organic material

text: North Sea

text: mantle

text: mantle

text: Pacific oyster

characteristic: host common name

text: adult

characteristic: host life stage

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: f: ACGATCGT; r: ACAGCTCA

characteristic: multiplex identifiers

text: Crassostrea gigas

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

characteristic: perturbation

text: scalpel

characteristic: sample collection device or method

characteristic: sample volume or weight for DNA extraction

text: Crassostrea gigas

text: 16s rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: temperature

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Pacific oyster

characteristic: common name

text: Pacific oyster (Crassostrea gigas) mantle microbiota; collected 06-Jun-2012; treated with None translocated from Texel (NL) to Sylt (D); samples taken 5 days after deployment

characteristic: description

text: aquatic marine benthic coastal

characteristic: environment (biome)

text: organic

characteristic: environment (feature)

text: organic material

characteristic: environment (material)

text: North Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: mantle

characteristic: host body habitat

text: mantle

characteristic: host body site

text: Pacific oyster

text: adult

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: f: GGCCATAT; r: GACAAGTG

text: Crassostrea gigas

characteristic: project name

text: scalpel

text: Crassostrea gigas

characteristic: sequencing method

text: 16s rRNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Pacific oyster

text: aquatic marine benthic coastal

text: organic

text: organic material

text: North Sea

text: Germany Schleswig Holstein Sylt List Wadden Sea Odewatt

text: mantle

text: mantle

text: Pacific oyster

characteristic: host common name

text: adult

characteristic: host life stage

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: f: ACGATCGT; r: TTGGTACG

characteristic: multiplex identifiers

text: Crassostrea gigas

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: treated with None translocated from Texel (NL) to Sylt (D)

characteristic: perturbation

text: scalpel

characteristic: sample collection device or method

characteristic: sample volume or weight for DNA extraction

text: Crassostrea gigas

text: 16s rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: temperature

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Pacific oyster

characteristic: common name

characteristic: description

text: aquatic marine benthic coastal

characteristic: environment (biome)

text: organic

characteristic: environment (feature)

text: organic material

characteristic: environment (material)

text: North Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: mantle

characteristic: host body habitat

text: mantle

characteristic: host body site

text: Pacific oyster

text: adult

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: f: ACGATCGT; r: CGTTAAGC

text: Crassostrea gigas

text: initial denaturation:98degC_30s; denaturation:98degC_9s;annealing:55degC_1min; elongation:72degC_90s; final elongation:72degC_10min; 30 cycles

characteristic: project name

text: scalpel

text: Crassostrea gigas

text: Sequencing by synthesis Illumina paired-end

characteristic: sequencing method

text: 16s rRNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ALFRED WEGENER INSTITUTE FOR POLAR AND MARINE RESE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: chemical administration

text: Pacific oyster

text: aquatic marine benthic coastal

text: organic

text: organic material

text: North Sea

text: mantle

text: mantle

text: Pacific oyster

characteristic: host common name

text: adult

characteristic: host life stage

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: f: GGCCATAT; r: ACAGCTCA

characteristic: multiplex identifiers

text: Crassostrea gigas

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

characteristic: perturbation

text: scalpel

characteristic: sample collection device or method

characteristic: sample volume or weight for DNA extraction

text: Crassostrea gigas

text: 16s rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: temperature

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

unit: µM/L

characteristic: ammonium

unit: µg/L

characteristic: chlorophyll

characteristic: collection date

text: seawater sample taken near the oyster reef at low tide; nutrients, pH and salinity measured at a nearby site, around 300 m away on the same day

characteristic: description

characteristic: dissolved organic nitrogen

text: aquatic, marine, benthic, coastal

characteristic: environment (biome)

text: oyster reef

characteristic: environment (feature)

text: environmental material, water, seawater

characteristic: environment (material)

text: North Sea

characteristic: geographic location (country and/or sea)

unit: m

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: f: CAGTTGAC; r GCATTAGC

unit: µmol/L

characteristic: nitrate

characteristic: nitrite

characteristic: nitrogen

characteristic: organic nitrogen

text: seawater metagenome

text: 27F: TCAGAGTTTGATCMTGGCTCAG + 338r: CATGCTGCCTCCCGTAGGAGT

characteristic: ph

characteristic: phosphate

characteristic: project name

unit: practical salinity unit

characteristic: salinity

text: tube

text: filtering onto 0.2 um filter

characteristic: sample material processing

unit: mL

text: seawater metagenome

text: Sequencing by synthesis, Illumina paired-end

characteristic: sequencing method

characteristic: silicate

unit: mg/L

characteristic: suspended particulate matter

text: 16s rRNA

text: low

characteristic: tidal stage

text: Seawater sample 1

characteristic: total dissolved nitrogen

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: ammonium

characteristic: chlorophyll

characteristic: collection date

text: seawater sample taken near the oyster reef at low tide; nutrients, pH and salinity measured at a nearby site, around 300 m away day after

characteristic: description

characteristic: dissolved organic nitrogen

text: aquatic, marine, benthic, coastal

characteristic: environment (biome)

text: oyster reef

characteristic: environment (feature)

text: environmental material, water, seawater

characteristic: environment (material)

text: North Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: mimarks-survey

text: f: CAGTTGAC; r TTGGTACG

characteristic: multiplex identifiers

text: seawater metagenome

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: tube

characteristic: sample collection device or method

text: filtering onto 0.2 um filter

characteristic: sample volume or weight for DNA extraction

text: seawater metagenome

text: 16s rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: temperature

text: low

text: Seawater sample 2

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: ammonium

characteristic: chlorophyll

characteristic: collection date

characteristic: description

characteristic: dissolved organic nitrogen

text: aquatic, marine, benthic, coastal

text: oyster reef

text: environmental material, water, seawater

text: North Sea

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: f: CAGTTGAC; r TGTGGACT

characteristic: nitrate

characteristic: nitrite

characteristic: nitrogen

characteristic: organic nitrogen

text: seawater metagenome

characteristic: ph

characteristic: phosphate

characteristic: project name

characteristic: salinity

text: tube

text: filtering onto 0.2 um filter

characteristic: sample material processing

text: seawater metagenome

characteristic: sequencing method

characteristic: silicate

characteristic: suspended particulate matter

text: 16s rRNA

text: low

characteristic: tidal stage

text: Seawater sample 3

characteristic: total dissolved nitrogen

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Blank extraction with ddH2O; this was a single NTC with amplificiation

characteristic: description

text: water

characteristic: environment (biome)

text: water

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: mimarks-survey

text: miscellaneous natural or artificial environment

characteristic: miscellaneous environmental package

text: f: TGTCCAGA; r TGTGGACT

characteristic: multiplex identifiers

text: metagenome

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: metagenome

text: 16s rRNA

characteristic: target gene

characteristic: target subfragment

text: DNA blank extraction

characteristic: title


text: male

characteristic: ArrayExpress-Sex

text: Mus musculus

characteristic: ArrayExpress-Species

characteristic: ArrayExpress-StrainOrLine

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: house mouse

characteristic: common name

text: Mus musculus

text: Whole-genome sequencing of inbred laboratory mouse strain. DNA obtained from the Jackson laboratory, ME, USA.

characteristic: sample description

text: Mus musculus

characteristic: strain


DhMRE

text: No

characteristic: Definitive assembly

text: LUDWIG-MAXIMILIANS-UNIVERSIT*T M*NCHEN

text: public

text: DhMRE

characteristic: Submitter Id

characteristic: collection date

text: Soil

characteristic: environment (biome)

text: Soil

characteristic: environment (feature)

text: Soil

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Dentiscutata heterogama

characteristic: host common name

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

characteristic: number of replicons

text: symbiont

characteristic: observed biotic relationship

text: endosymbiont DhMRE of Dentiscutata heterogama

characteristic: organism

text: DhMRE genome

characteristic: project name

text: Illumina

characteristic: sequencing method

text: DhMRE

text: Mollicutes related bacteria of Dentiscutata heterogama


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DUNDEE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Barley assembled rhizosphere metagenome (200bp and longer contigs)

characteristic: description

text: terrestrial biome

text: plant-associated habitat

text: rhizosphere

text: Germany

text: metagenome

text: Hordeum vulgare

text: plant-associated

characteristic: plant-associated environmental package

text: Hordeum vulgare

text: Illumina

text: Barley assembled rhizosphere metagenome

characteristic: title


name: Hot spring microbial communities from Tulshi shyam1

text: Hem. North Gujarat University - India

text: public

tag: Namespace:Hem. North Gujarat University  - India

characteristic: collection date

text: A taxonomic description of bacteria was deduced from 5.78 MB metagenomic sequence retrived from Tulshi shyam Hot spring, India using bacterial tag-encoded FLX amplicon pyrosequencing (bTEFAP). Metagenome sequences represented the 98.2% bacteria origin, 1.5% of eukaryotic and 0.3% were unidentified. A total of 16 bacterial phyla demonstrating 97 families and 287 species were revealed in the hot spring metagenome.

text: Hot Spring

characteristic: environment (biome)

text: Water reservior

characteristic: environment (feature)

text: Hot water

characteristic: environment (material)

text: India

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: hot springs metagenome

text: Hot Spring Megagenome

text: hot springs metagenome

text: 454 GS-FLX Titanium

text: Bacterial diversity assessment of Tulshi shyam hot spring using metagenomic approach

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CNPEM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: depth

text: Anaerobic Reactors treating sugarcane stillage

text: anaerobic sludge

text: anaerobic sludge

text: anaerobic sludge

text: Brazil

characteristic: geographic location (elevation)

text: metagenome

text: microbial mat/biofilm

characteristic: microbial mat/biofilm environmental package

text: metagenome

characteristic: organism

text: Anaerobic reactors

characteristic: project name

text: metagenome

text: Illumina

characteristic: sequencing method

text: Vinasse

type: has member


text: CSIRO

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Nicholas Cooper

characteristic: collected by

text: Australia

characteristic: geographic location (country and/or sea)

text: Nicholas Cooper

characteristic: identified by

text: Termite mound

characteristic: isolation source

text: 33.7594 S 150.9902 E

characteristic: lat lon

text: Nasutitermes exitiosus

text: Nasutitermes exitiosus

text: Enrichment culture from

characteristic: title


name: Monash University Malaysia Genomics Facility, Soil amended with commercial soluble humate granules applied at 300 kg/ha, replicate 1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MONASH-CHEM

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: BRAEMBL

characteristic: broker name

text: UPARSE

characteristic: chimera check

characteristic: collection date

text: Amplicon sequencing of the metagenome of soil amended with commercial soluble humate granules applied at 300 kg/ha.

characteristic: description

text: Agricultural land

characteristic: environment (biome)

text: Irrigated field

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Australia

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Cranbourne, Victoria

characteristic: geographic location (region and locality)

characteristic: history/agrochemical additions

text: metagenome

characteristic: investigation type

text: soil metagenome

characteristic: sample weight for DNA extraction

text: soil metagenome

text: Illumina

text: soil

characteristic: soil environmental package

text: Dermosol

characteristic: soil taxonomic/local classification

text: Isbell, 2002, The Australian Soil Classification, revised edn (CSIRO Publishing: Melbourne)

characteristic: soil taxonomic/local classification method

text: frozen at -20°C for 7 days

characteristic: storage conditions (fresh/frozen/other)

text: Metagenome of soil amended with commercial soluble humate granules applied at 300 kg/ha

characteristic: total nitrogen (percent)

text: Leco IR analyser

characteristic: total nitrogen method

text: Leco IR analyser

characteristic: total organic C method

characteristic: total organic carbon (percent)


name: Monash University Malaysia Genomics Facility, Unamended soil, replicate 1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MONASH-CHEM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: BRAEMBL

characteristic: broker name

text: UPARSE

characteristic: chimera check

characteristic: collection date

characteristic: depth

text: Amplicon sequencing of the metagenome of unamended soil.

characteristic: description

text: Agricultural land

characteristic: environment (biome)

text: Irrigated field

text: soil

text: Australia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

text: Cranbourne, Victoria

text: Unamended soil

text: metagenome

text: soil metagenome

characteristic: organism

text: Unamended soil

characteristic: project name

text: soil metagenome

text: Illumina

characteristic: sequencing method

text: soil

text: Dermosol

text: frozen at -20°C for 7 days

text: Metagenome of unamended soil

characteristic: title

text: Leco IR analyser

text: Leco IR analyser


name: Monash University Malaysia Genomics Facility, Unamended soil, replicate 5

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MONASH-CHEM

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: BRAEMBL

text: UPARSE

text: Agricultural land

text: Irrigated field

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Australia

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Cranbourne, Victoria

characteristic: geographic location (region and locality)

text: Unamended soil

characteristic: history/agrochemical additions

text: metagenome

characteristic: investigation type

text: soil metagenome

text: Unamended soil

characteristic: sample weight for DNA extraction

text: soil metagenome

text: Illumina

text: soil

characteristic: soil environmental package

text: Dermosol

characteristic: soil taxonomic/local classification

characteristic: soil taxonomic/local classification method

text: frozen at -20°C for 7 days

characteristic: storage conditions (fresh/frozen/other)

text: Metagenome of unamended soil

characteristic: total nitrogen (percent)

text: Leco IR analyser

characteristic: total nitrogen method

text: Leco IR analyser

characteristic: total organic C method

characteristic: total organic carbon (percent)


name: Monash University Malaysia Genomics Facility, Unamended soil, replicate 4

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MONASH-CHEM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: BRAEMBL

characteristic: broker name

text: UPARSE

characteristic: chimera check

characteristic: collection date

characteristic: depth

characteristic: description

text: Agricultural land

characteristic: environment (biome)

text: Irrigated field

text: soil

text: Australia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

text: Cranbourne, Victoria

text: Unamended soil

text: metagenome

text: soil metagenome

characteristic: organism

text: Unamended soil

characteristic: project name

text: soil metagenome

text: Illumina

characteristic: sequencing method

text: soil

text: Dermosol

text: frozen at -20°C for 7 days

text: Metagenome of unamended soil

characteristic: title

text: Leco IR analyser

text: Leco IR analyser


name: Monash University Malaysia Genomics Facility, Soil amended with commercial soluble humate granules applied at 300 kg/ha, replicate 2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MONASH-CHEM

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: BRAEMBL

text: UPARSE

text: Agricultural land

text: Irrigated field

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Australia

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Cranbourne, Victoria

characteristic: geographic location (region and locality)

characteristic: history/agrochemical additions

text: metagenome

characteristic: investigation type

text: soil metagenome

characteristic: sample weight for DNA extraction

text: soil metagenome

text: Illumina

text: soil

characteristic: soil environmental package

text: Dermosol

characteristic: soil taxonomic/local classification

characteristic: soil taxonomic/local classification method

text: frozen at -20°C for 7 days

characteristic: storage conditions (fresh/frozen/other)

characteristic: total nitrogen (percent)

text: Leco IR analyser

characteristic: total nitrogen method

text: Leco IR analyser

characteristic: total organic C method

characteristic: total organic carbon (percent)