characteristic: External Id

characteristic: INSDC first public

text: public

tag: Namespace:GFZ German Research Centre for Geosciences

characteristic: collection date

text: Towuti shallow site sediment

unit: m

characteristic: depth

text: Intracellular DNA extract of a sediment short core from Lake Towuti at water depth 60 m, 0.5 m core depth, replicate A

text: freshwater lake biome

characteristic: environment (biome)

text: lake sediment

characteristic: environment (feature)

text: lake sediment

characteristic: environment (material)

text: Indonesia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Sulawesi Island, Malili Lake System

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: sediment metagenome

text: 515F (5'- GTG CCA GCM GCC GCG GTA A -3') 806R (5'- GGA CTA CHV GGG TWT CTA AT -3')

characteristic: pcr primers

text: Towuti Drilling Project pilot campaign 2013

characteristic: project name

text: sediment metagenome

text: sediment

characteristic: sediment environmental package

text: Illumina MiSeq 2x250bp

characteristic: sequencing method

text: bacteria and archaea

characteristic: subspecific genetic lineage

text: 16S rDNA

characteristic: target gene

text: 16S V4

characteristic: target subfragment

text: short core sediment sample


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFZ German Research Centre for Geosciences

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Towuti shallow site sediment

characteristic: common name

characteristic: depth

text: Intracellular DNA extract of a sediment short core from Lake Towuti at water depth 60 m, 7.5 m core depth, replicate A

characteristic: description

text: freshwater lake biome

text: lake sediment

text: lake sediment

text: Indonesia

text: Sulawesi Island, Malili Lake System

text: mimarks-survey

text: sediment metagenome

characteristic: organism

text: sediment metagenome

text: sediment

text: Illumina MiSeq 2x250bp

text: bacteria and archaea

text: 16S rDNA

text: 16S V4

text: short core sediment sample

characteristic: title


text: public

text: Towuti shallow site sediment

text: Intracellular DNA extract of a sediment short core from Lake Towuti at water depth 60 m, 15.0 m core depth, replicate A

text: freshwater lake biome

characteristic: environment (biome)

text: lake sediment

characteristic: environment (feature)

text: lake sediment

characteristic: environment (material)

text: Indonesia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Sulawesi Island, Malili Lake System

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: sediment metagenome

characteristic: pcr primers

characteristic: project name

text: sediment metagenome

text: sediment

characteristic: sediment environmental package

text: Illumina MiSeq 2x250bp

characteristic: sequencing method

text: bacteria and archaea

characteristic: subspecific genetic lineage

text: 16S rDNA

characteristic: target gene

text: 16S V4

characteristic: target subfragment

text: short core sediment sample


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Towuti shallow site sediment

characteristic: common name

characteristic: depth

text: Intracellular DNA extract of a sediment short core from Lake Towuti at water depth 60 m, 27.5 m core depth, replicate A

characteristic: description

text: freshwater lake biome

text: lake sediment

text: lake sediment

text: Indonesia

text: Sulawesi Island, Malili Lake System

text: mimarks-survey

text: sediment metagenome

characteristic: organism

text: sediment metagenome

text: sediment

text: Illumina MiSeq 2x250bp

text: bacteria and archaea

text: 16S rDNA

text: 16S V4

text: short core sediment sample

characteristic: title


text: public

text: Towuti shallow site sediment

text: Intracellular DNA extract of a sediment short core from Lake Towuti at water depth 60 m, 0.5 m core depth, replicate B

text: freshwater lake biome

characteristic: environment (biome)

text: lake sediment

characteristic: environment (feature)

text: lake sediment

characteristic: environment (material)

text: Indonesia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Sulawesi Island, Malili Lake System

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: sediment metagenome

characteristic: pcr primers

characteristic: project name

text: sediment metagenome

text: sediment

characteristic: sediment environmental package

text: Illumina MiSeq 2x250bp

characteristic: sequencing method

text: bacteria and archaea

characteristic: subspecific genetic lineage

text: 16S rDNA

characteristic: target gene

text: 16S V4

characteristic: target subfragment

text: short core sediment sample


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Towuti shallow site sediment

characteristic: common name

characteristic: depth

text: Intracellular DNA extract of a sediment short core from Lake Towuti at water depth 60 m, 7.5 m core depth, replicate B

characteristic: description

text: freshwater lake biome

text: lake sediment

text: lake sediment

text: Indonesia

text: Sulawesi Island, Malili Lake System

text: mimarks-survey

text: sediment metagenome

characteristic: organism

text: sediment metagenome

text: sediment

text: Illumina MiSeq 2x250bp

text: bacteria and archaea

text: 16S rDNA

text: 16S V4

text: short core sediment sample

characteristic: title


text: public

text: Towuti shallow site sediment

text: Intracellular DNA extract of a sediment short core from Lake Towuti at water depth 60 m, 15.0 m core depth, replicate B

text: freshwater lake biome

characteristic: environment (biome)

text: lake sediment

characteristic: environment (feature)

text: lake sediment

characteristic: environment (material)

text: Indonesia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Sulawesi Island, Malili Lake System

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: sediment metagenome

characteristic: pcr primers

characteristic: project name

text: sediment metagenome

text: sediment

characteristic: sediment environmental package

text: Illumina MiSeq 2x250bp

characteristic: sequencing method

text: bacteria and archaea

characteristic: subspecific genetic lineage

text: 16S rDNA

characteristic: target gene

text: 16S V4

characteristic: target subfragment

text: short core sediment sample


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Towuti shallow site sediment

characteristic: common name

characteristic: depth

text: Intracellular DNA extract of a sediment short core from Lake Towuti at water depth 60 m, 27.5 m core depth, replicate B

characteristic: description

text: freshwater lake biome

text: lake sediment

text: lake sediment

text: Indonesia

text: Sulawesi Island, Malili Lake System

text: mimarks-survey

text: sediment metagenome

characteristic: organism

text: sediment metagenome

text: sediment

text: Illumina MiSeq 2x250bp

text: bacteria and archaea

text: 16S rDNA

text: 16S V4

text: short core sediment sample

characteristic: title


text: public

text: Towuti intermediate site sediment

text: Intracellular DNA extract of a sediment short core from Lake Towuti at water depth 153 m, 1.5 m core depth, replicate A

text: freshwater lake biome

characteristic: environment (biome)

text: lake sediment

characteristic: environment (feature)

text: lake sediment

characteristic: environment (material)

text: Indonesia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Sulawesi Island, Malili Lake System

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: sediment metagenome

characteristic: pcr primers

characteristic: project name

text: sediment metagenome

text: sediment

characteristic: sediment environmental package

text: Illumina MiSeq 2x250bp

characteristic: sequencing method

text: bacteria and archaea

characteristic: subspecific genetic lineage

text: 16S rDNA

characteristic: target gene

text: 16S V4

characteristic: target subfragment

text: short core sediment sample


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Towuti intermediate site sediment

characteristic: common name

characteristic: depth

text: Intracellular DNA extract of a sediment short core from Lake Towuti at water depth 153 m, 7.5 m core depth, replicate A

characteristic: description

text: freshwater lake biome

text: lake sediment

text: lake sediment

text: Indonesia

text: Sulawesi Island, Malili Lake System

text: mimarks-survey

text: sediment metagenome

characteristic: organism

text: sediment metagenome

text: sediment

text: Illumina MiSeq 2x250bp

text: bacteria and archaea

text: 16S rDNA

text: 16S V4

text: short core sediment sample

characteristic: title


text: public

text: Towuti intermediate site sediment

text: Intracellular DNA extract of a sediment short core from Lake Towuti at water depth 153 m, 15.0 m core depth, replicate A

text: freshwater lake biome

characteristic: environment (biome)

text: lake sediment

characteristic: environment (feature)

text: lake sediment

characteristic: environment (material)

text: Indonesia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Sulawesi Island, Malili Lake System

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: sediment metagenome

characteristic: pcr primers

characteristic: project name

text: sediment metagenome

text: sediment

characteristic: sediment environmental package

text: Illumina MiSeq 2x250bp

characteristic: sequencing method

text: bacteria and archaea

characteristic: subspecific genetic lineage

text: 16S rDNA

characteristic: target gene

text: 16S V4

characteristic: target subfragment

text: short core sediment sample


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Towuti intermediate site sediment

characteristic: common name

characteristic: depth

text: Intracellular DNA extract of a sediment short core from Lake Towuti at water depth 153 m, 32.5 m core depth, replicate A

characteristic: description

text: freshwater lake biome

text: lake sediment

text: lake sediment

text: Indonesia

text: Sulawesi Island, Malili Lake System

text: mimarks-survey

text: sediment metagenome

characteristic: organism

text: sediment metagenome

text: sediment

text: Illumina MiSeq 2x250bp

text: bacteria and archaea

text: 16S rDNA

text: 16S V4

text: short core sediment sample

characteristic: title


text: public

text: Towuti intermediate site sediment

text: Intracellular DNA extract of a sediment short core from Lake Towuti at water depth 153 m, 1.5 m core depth, replicate B

text: freshwater lake biome

characteristic: environment (biome)

text: lake sediment

characteristic: environment (feature)

text: lake sediment

characteristic: environment (material)

text: Indonesia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Sulawesi Island, Malili Lake System

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: sediment metagenome

characteristic: pcr primers

characteristic: project name

text: sediment metagenome

text: sediment

characteristic: sediment environmental package

text: Illumina MiSeq 2x250bp

characteristic: sequencing method

text: bacteria and archaea

characteristic: subspecific genetic lineage

text: 16S rDNA

characteristic: target gene

text: 16S V4

characteristic: target subfragment

text: short core sediment sample


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Towuti intermediate site sediment

characteristic: common name

characteristic: depth

text: Intracellular DNA extract of a sediment short core from Lake Towuti at water depth 153 m, 7.5 m core depth, replicate B

characteristic: description

text: freshwater lake biome

text: lake sediment

text: lake sediment

text: Indonesia

text: Sulawesi Island, Malili Lake System

text: mimarks-survey

text: sediment metagenome

characteristic: organism

text: sediment metagenome

text: sediment

text: Illumina MiSeq 2x250bp

text: bacteria and archaea

text: 16S rDNA

text: 16S V4

text: short core sediment sample

characteristic: title


text: public

text: Towuti intermediate site sediment

text: Intracellular DNA extract of a sediment short core from Lake Towuti at water depth 153 m, 15.0 m core depth, replicate B

text: freshwater lake biome

characteristic: environment (biome)

text: lake sediment

characteristic: environment (feature)

text: lake sediment

characteristic: environment (material)

text: Indonesia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Sulawesi Island, Malili Lake System

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: sediment metagenome

characteristic: pcr primers

characteristic: project name

text: sediment metagenome

text: sediment

characteristic: sediment environmental package

text: Illumina MiSeq 2x250bp

characteristic: sequencing method

text: bacteria and archaea

characteristic: subspecific genetic lineage

text: 16S rDNA

characteristic: target gene

text: 16S V4

characteristic: target subfragment

text: short core sediment sample


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Towuti intermediate site sediment

characteristic: common name

characteristic: depth

text: Intracellular DNA extract of a sediment short core from Lake Towuti at water depth 153 m, 32.5 m core depth, replicate B

characteristic: description

text: freshwater lake biome

text: lake sediment

text: lake sediment

text: Indonesia

text: Sulawesi Island, Malili Lake System

text: mimarks-survey

text: sediment metagenome

characteristic: organism

text: 515F (5'- GTG CCA GCM GCC GCG GTA A -3') 806R (5'- GGA CTA CHV GGG TWT CTA AT -3')

text: sediment metagenome

text: sediment

text: Illumina MiSeq 2x250bp

text: bacteria and archaea

text: 16S rDNA

text: 16S V4

text: short core sediment sample

characteristic: title


text: GFZ German Research Centre for Geosciences

text: public

text: Towuti deep site sediment

text: Intracellular DNA extract of a sediment short core from Lake Towuti at water depth 200 m, 1.5 m core depth, replicate A

text: freshwater lake biome

characteristic: environment (biome)

text: lake sediment

characteristic: environment (feature)

text: lake sediment

characteristic: environment (material)

text: Indonesia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Sulawesi Island, Malili Lake System

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: sediment metagenome

characteristic: pcr primers

text: Towuti Drilling Project pilot campaign 2013

characteristic: project name

text: sediment metagenome

text: sediment

characteristic: sediment environmental package

text: Illumina MiSeq 2x250bp

characteristic: sequencing method

text: bacteria and archaea

characteristic: subspecific genetic lineage

text: 16S rDNA

characteristic: target gene

text: 16S V4

characteristic: target subfragment

text: short core sediment sample


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Towuti deep site sediment

characteristic: common name

characteristic: depth

text: Intracellular DNA extract of a sediment short core from Lake Towuti at water depth 200 m, 7.5 m core depth, replicate A

characteristic: description

text: freshwater lake biome

text: lake sediment

text: lake sediment

text: Indonesia

text: Sulawesi Island, Malili Lake System

text: mimarks-survey

text: sediment metagenome

characteristic: organism

text: sediment metagenome

text: sediment

text: Illumina MiSeq 2x250bp

text: bacteria and archaea

text: 16S rDNA

text: 16S V4

text: short core sediment sample

characteristic: title


text: public

text: Towuti deep site sediment

text: Intracellular DNA extract of a sediment short core from Lake Towuti at water depth 200 m, 15.0 m core depth, replicate A

text: freshwater lake biome

characteristic: environment (biome)

text: lake sediment

characteristic: environment (feature)

text: lake sediment

characteristic: environment (material)

text: Indonesia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Sulawesi Island, Malili Lake System

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: sediment metagenome

characteristic: pcr primers

characteristic: project name

text: sediment metagenome

text: sediment

characteristic: sediment environmental package

text: Illumina MiSeq 2x250bp

characteristic: sequencing method

text: bacteria and archaea

characteristic: subspecific genetic lineage

text: 16S rDNA

characteristic: target gene

text: 16S V4

characteristic: target subfragment

text: short core sediment sample


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Towuti deep site sediment

characteristic: common name

characteristic: depth

text: Intracellular DNA extract of a sediment short core from Lake Towuti at water depth 200 m, 32.5 m core depth, replicate A

characteristic: description

text: freshwater lake biome

text: lake sediment

text: lake sediment

text: Indonesia

text: Sulawesi Island, Malili Lake System

text: mimarks-survey

text: sediment metagenome

characteristic: organism

text: sediment metagenome

text: sediment

text: Illumina MiSeq 2x250bp

text: bacteria and archaea

text: 16S rDNA

text: 16S V4

text: short core sediment sample

characteristic: title


text: public

text: Towuti deep site sediment

text: Intracellular DNA extract of a sediment short core from Lake Towuti at water depth 200 m, 1.5 m core depth, replicate B

text: freshwater lake biome

characteristic: environment (biome)

text: lake sediment

characteristic: environment (feature)

text: lake sediment

characteristic: environment (material)

text: Indonesia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Sulawesi Island, Malili Lake System

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: sediment metagenome

characteristic: pcr primers

characteristic: project name

text: sediment metagenome

text: sediment

characteristic: sediment environmental package

text: Illumina MiSeq 2x250bp

characteristic: sequencing method

text: bacteria and archaea

characteristic: subspecific genetic lineage

text: 16S rDNA

characteristic: target gene

text: 16S V4

characteristic: target subfragment

text: short core sediment sample


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Towuti deep site sediment

characteristic: common name

characteristic: depth

text: Intracellular DNA extract of a sediment short core from Lake Towuti at water depth 200 m, 7.5 m core depth, replicate B

characteristic: description

text: freshwater lake biome

text: lake sediment

text: lake sediment

text: Indonesia

text: Sulawesi Island, Malili Lake System

text: mimarks-survey

text: sediment metagenome

characteristic: organism

text: sediment metagenome

text: sediment

text: Illumina MiSeq 2x250bp

text: bacteria and archaea

text: 16S rDNA

text: 16S V4

text: short core sediment sample

characteristic: title


text: public

text: Towuti deep site sediment

text: Intracellular DNA extract of a sediment short core from Lake Towuti at water depth 200 m, 15.0 m core depth, replicate B

text: freshwater lake biome

characteristic: environment (biome)

text: lake sediment

characteristic: environment (feature)

text: lake sediment

characteristic: environment (material)

text: Indonesia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Sulawesi Island, Malili Lake System

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: sediment metagenome

characteristic: pcr primers

characteristic: project name

text: sediment metagenome

text: sediment

characteristic: sediment environmental package

text: Illumina MiSeq 2x250bp

characteristic: sequencing method

text: bacteria and archaea

characteristic: subspecific genetic lineage

text: 16S rDNA

characteristic: target gene

text: 16S V4

characteristic: target subfragment

text: short core sediment sample


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Towuti deep site sediment

characteristic: common name

characteristic: depth

text: Intracellular DNA extract of a sediment short core from Lake Towuti at water depth 200 m, 32.5 m core depth, replicate B

characteristic: description

text: freshwater lake biome

text: lake sediment

text: lake sediment

text: Indonesia

text: Sulawesi Island, Malili Lake System

text: mimarks-survey

text: sediment metagenome

characteristic: organism

text: sediment metagenome

text: sediment

text: Illumina MiSeq 2x250bp

text: bacteria and archaea

text: 16S rDNA

text: 16S V4

text: short core sediment sample

characteristic: title


text: Department of Animal Biotechnology

text: public

tag: Namespace:Department of Animal Biotechnology

text: chicken

text: gut

characteristic: environment (biome)

text: gut

characteristic: environment (feature)

text: content

characteristic: environment (material)

text: India

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: Gallus gallus

text: DBT-BBSRC

characteristic: project name

text: Gallus gallus

text: Miseq Shotgun

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: AUTH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Greece

text: Thessaloniki

characteristic: geographic location (region and locality)

text: Daucus carota, wild carrot

characteristic: host

characteristic: isolate

text: Wild carrot red leaf virus

text: Wild carrot red leaf virus

text: Wild carrot red leaf virus isolate RL1, complete genome


text: AUTH

text: public

characteristic: collection date

text: Greece

characteristic: geographic location (country and/or sea)

text: Thessaloniki

text: Daucus carota, wild carrot

text: Wild carrot mottle virus

characteristic: organism

text: Wild carrot mottle virus

text: Wild carrot mottle virus isolate RL1-Um, complete genome

characteristic: title


characteristic: ENA-CHECKLIST

text: AUTH

text: public

text: Greece

text: Thessaloniki

text: Daucus carota, wild carrot

text: Carrot red leaf virus associated RNA

text: Carrot red leaf virus associated RNA

text: CtRLVaRNA RL1-a, complete genome


characteristic: ENA-FIRST-PUBLIC

text: AUTH

text: public

text: Greece

text: Imathia-Naousa

text: Torilis arvensis subsp. arvensis

text: Torilis crimson leaf virus

text: Torilis crimson leaf virus

text: Torilis crimson leaf virus isolate RL5, complete genome


characteristic: ENA-LAST-UPDATE

text: AUTH

text: public

text: Greece

text: Imathia-Naousa

text: Torilis arvensis subsp. arvensis

text: Carrot thin leaf virus

text: Carrot thin leaf virus

text: Carrot thin leaf virus isolate RL5-Pot, complete genome


characteristic: External Id

text: AUTH

text: public

text: Greece

text: Imathia-Naousa

text: Torilis arvensis subsp. arvensis

text: Carrot torradovirus 1

text: Carrot torradovirus 1

text: Carrot torradovirus 1 isolate RL5-Tor, RNA2 complete sequence


Phages 3P1

text: INSTITUT DE GENETIQUE ET MICROBIOLOGIE

characteristic: INSDC center name

text: public

text: Phages 3P1

tag: Namespace:INSTITUT DE GENETIQUE ET MICROBIOLOGIE

text: aborted deposit

characteristic: description

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa

text: unused


text: Reich Lab

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:Reich Lab

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: Ancient Near East

type: has member


text: Reich Lab

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

text: Natufian

text: Homo sapiens

text: Homo sapiens

text: Ancient Near East


text: FZB

text: public

text: M. chimaera

text: Mycobacterium chimaera

text: Mycobacterium chimaera

text: WGS of M. chimaera isolates


text: FZB

text: public

text: M. intracellulare

text: Mycobacterium intracellulare

text: Mycobacterium intracellulare

text: WGS of M. intracellulare isolates


text: INSTITUT DE GENETIQUE ET MICROBIOLOGIE

text: public

text: aborted deposit

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa

text: unused


text: public

tag: Namespace:MRC Clinical Sciences Centre. Imperial College London

characteristic: biological repeat

text: ArrayExpress

characteristic: broker name

text: fission yeast

text: Protocols: S. pombe cells were grown in EMM medium supplemented with 20 ug/ml Thiamine at 30C for 10 hours (final OD600: 0.5-0.6). ChIP experiments were performed as described in (Larochelle et al. NAR 2012, 40:10240). For ChIP-seq experiments, chromatin immunoprecipitation was done as described above with the following modifications. We scaled up the reactions to obtain larger amount of chromatin for library preparation. Chromatin was immunoprecipitated with Pan mouse IgG Dynabeads (Invitrogen) antibody against Rpb1 (8WG16, Convance). The 8WG16 antibody is known to recognize the C-terminal domain (CTD) of Rpb1 and measures total RNAPII along genes in yeast. Total RNA was isolated from S. pombe cells using a hot phenol method followed by phenol-chloroform extractions, and precipitation as described (Lyne et al., 2003, BMC Genomics 4, 27.). 10ug total RNA was used as starting material for strand-specific RNA-seq library preparation using an unreleased early version provided by Illumina of the Illumina TruSeq Small RNA Sample Prep Kit. Briefly: poly(A)+ RNA was enriched by two rounds of poly(dT) Sera-Mag magnetic beads purification. Enriched poly(A)+ RNA was then fragmented to an average size of ~200nt. Fragmented RNA was 3' de-phosphorylated with Antartic phosphatase and 5' phosphorylated with polynucleotide kinase this treatment prepares RNA fragments for subsequent ligation of Illumina RNA adaptors to their 5' and 3' ends using a 3' RNA ligase and a T4 RNA ligase, respectively. First strand cDNA was produced using a primer specific for the Illumina 3' adaptor. The library was finally amplified with 15 cycles of PCR using primers specific for the Illumina adaptors and purified using SPRI-beads (Agencourt, Beckman Coulter). Libraries size distributions and concentrations were determined on an Agilent Bioanalyzer

text: h+ ade6? leu1-32 ura4-D18 his3-D1 P41nmt1-seb1::kanMX6

characteristic: genotype

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe

characteristic: strain


text: MRC Clinical Sciences Centre. Imperial College London

text: public

text: ArrayExpress

text: fission yeast

text: Schizosaccharomyces pombe

characteristic: organism

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: ArrayExpress

text: fission yeast

text: Protocols: S. pombe cells were grown in EMM medium supplemented with 20 ug/ml Thiamine at 30C for 10 hours (final OD600: 0.5-0.6). ChIP experiments were performed as described in (Larochelle et al. NAR 2012, 40:10240). For ChIP-seq experiments, chromatin immunoprecipitation was done as described above with the following modifications. We scaled up the reactions to obtain larger amount of chromatin for library preparation. Chromatin was immunoprecipitated with Pan mouse IgG Dynabeads (Invitrogen) antibody against Rpb1 (8WG16, Convance). The 8WG16 antibody is known to recognize the C-terminal domain (CTD) of Rpb1 and measures total RNAPII along genes in yeast. Whole cell extract from fixed cells was prepared as described in (Larochelle et al. NAR 2012, 40:10240) Libraries were prepared using the NEBNext ChIP-Seq Library Prep Master Mix Set for Illumina kit (New England BioLabs) according to the manufacturer instructions.

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: ArrayExpress

text: fission yeast

text: Protocols: S. pombe cells were grown in EMM medium supplemented with 20 ug/ml Thiamine at 30C for 10 hours (final OD600: 0.5-0.6). Cells were harvested and fixed for 20 minutes with 1% formaldehyde (Larochelle et al. NAR 2012, 40:10240) ChIP experiments were performed as described in (Larochelle et al. NAR 2012, 40:10240). For ChIP-seq experiments, chromatin immunoprecipitation was done as described above with the following modifications. We scaled up the reactions to obtain larger amount of chromatin for library preparation. Chromatin was immunoprecipitated with Pan mouse IgG Dynabeads (Invitrogen) antibody against Rpb1 (8WG16, Convance). The 8WG16 antibody is known to recognize the C-terminal domain (CTD) of Rpb1 and measures total RNAPII along genes in yeast. Whole cell extract from fixed cells was prepared as described in (Larochelle et al. NAR 2012, 40:10240) Libraries were prepared using the NEBNext ChIP-Seq Library Prep Master Mix Set for Illumina kit (New England BioLabs) according to the manufacturer instructions.

text: h+ ade6-M210 leu1-32 ura4-D18 his3-D1 Seb1-HTP::kanMX6

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe


characteristic: INSDC center name

text: public

tag: Namespace:Center for Biotechnology (CeBiTec), Universitat Bielefeld, Universitatsstr. 25, 33615 Bielefeld, Germany

text: ArrayExpress

text: Protocols: To obtain well-grown mycelia, spores (109) of S. coelicolor (WT and ∆hsr mutant) were inoculated in 10 ml R2 medium and grown as standing culture at 30°C for 16 h and afterwards on a rotary shaker for 16 h after the addition of 90 ml R2 medium. The cultures were washed four times in minimal medium without supplement. The mycelia were suspended in 50 ml R2 medium and divided in two 25 ml-portions, one of which contained H2O2 (0.15 mM). Cultivation was continued at 30 °C on a rotary shaker for two hours. Mycelia were harvested by centrifugation and the mycelia pellets were store at -80 °C. Total RNA was isolated from two biological replicates using in part a previously reported protocol Ortiz de Orue Lucana and Schrempf (2000) and the RNeasy Mini Kit along with a DNase Kit (both from Qiagen). Briefly, mycelia were washed with 25 mM Tris, pH 7.5. 1 g mycelia was resuspended in a 3 ml-solution of 4 M guanidinthiocyanate, 25 mM sodium citrate, pH 7, 0.5 % laurylsarcosine and 0.1 M 2-mercaptoethanol, and treated with 1 vol. glass beads by vortexing for 3 min. The glass beads and the cell debris were removed by centrifugation. 500 μl of the supernatant were used for isolation according to the protocols described in the RNeasy Mini and DNase Kit. The quality of the RNA was controlled on a 2 % agarose gel, and it was tested for possible DNA contaminations by PCR. RNA concentrations and quality were determined using Trinean Xpose (Gentbrugge, Belgium) and Agilent RNA Nano 6000 kit on Agilent 2100 Bioanalyzer (Agilent Technologies, Boblingen, Germany). Ribo-Zero rRNA Removal Kit (Bacteria) from Illumina (San Diego, CA, USA) was used to deplete ribosomal RNA. The quality of rRNA-depleted RNA samples was checked on Agilent 2100 Bioanalyzer. TruSeq® Stranded mRNA low sample protocolILLUMINA PROPRIETARYPart # 15031047 Rev. DSample Preparation Guide

characteristic: description

text: hbpSc-senSc-senRc disruption

characteristic: genetic modification

text: hsr

text: Streptomyces coelicolor

text: Streptomyces coelicolor

text: Streptomyces coelicolor


text: Center for Biotechnology (CeBiTec), Universitat Bielefeld, Universitatsstr. 25, 33615 Bielefeld, Germany

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ArrayExpress

text: hbpSc-senSc-senRc disruption

text: hsr

text: Streptomyces coelicolor

text: Streptomyces coelicolor

text: Streptomyces coelicolor

text: 2 hr Hydrogen Peroxide (0.15 mM)

characteristic: stimulus


text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: wild type genotype

text: Streptomyces coelicolor

text: Streptomyces coelicolor

text: Streptomyces coelicolor


text: public

text: ArrayExpress

characteristic: broker name

text: wild type genotype

characteristic: genotype

text: Streptomyces coelicolor

text: Streptomyces coelicolor

text: Streptomyces coelicolor

text: 2 hr Hydrogen Peroxide (0.15 mM)


text: public

tag: Namespace:Novo Nordisk Foundation Center for Biosustainability Technical University of Denmark

text: ArrayExpress

text: baker's yeast

characteristic: common name

text: Protocols: 24h cultivation, cells pelleted by centrifugation RNeasy based extraction TruSeq Stranded mRNA Sample Preparation protocol - low throughput (Illumina Inc., USA)

text: BenM absent

text: Saccharomyces cerevisiae

characteristic: organism

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: CEN.PK102-5B - MeLS0138

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Novo Nordisk Foundation Center for Biosustainability Technical University of Denmark

text: public

text: ArrayExpress

text: baker's yeast

text: BenM absent

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: CEN.PK102-5B - MeLS0138

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: ArrayExpress

text: baker's yeast

text: BenM present

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: CEN.PK102-5B - MeLS0284


characteristic: INSDC first public

text: public

tag: Namespace:WASHINGTON UNIVERSITY  SCHOOL OF MEDICINE

text: human

text: Homo sapiens

text: Homo sapiens

text: 7564.Household control.Con.A


text: WASHINGTON UNIVERSITY SCHOOL OF MEDICINE

characteristic: INSDC last update

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 7547.Household control.Con.B


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 14918.Household control.Con.C


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 7556.Household control.Con.D


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 7552.Household control.Con.E


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 10615.Household control.Con.F


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 13520.Household control.Con.G


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 7634.Household control.Con.I


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 7577.Household control.Con.J


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 7614.Household control.Con.L


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 7562.Ulcerative colitis.F.A


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 7605.Ulcerative colitis.er.A


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 10586.Ulcerative colitis.lr.A:


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 10618.Ulcerative colitis.F.A


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 12274.Ulcerative colitis.er.A


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 15027.Ulcerative colitis.lr.A


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 7544.Ulcerative colitis.F.B


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 7589.Ulcerative colitis.er.B


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 10569.Ulcerative colitis.lr.B


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 14894.Ulcerative colitis.F.C


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 15078.Ulcerative colitis.er.C


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 14950.Ulcerative colitis.lr.C


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 10578.Ulcerative colitis.er.D


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 7550.Ulcerative colitis.F.E


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 10613.Ulcerative colitis.F.F


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 10568.Ulcerative colitis.Imp.F.4


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 13519.Ulcerative colitis.F.G


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 7631.Crohn's disease.F.I


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 7632.Crohn's disease.er.I


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 7652.Crohn's disease.lr.I


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 7560.Crohn's disease.F.J


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 10571.Crohn's disease.lr.J


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 14898.Crohn's disease.F.K


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 15019.Crohn's disease.er.K


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 7612.Crohn's disease.F.L


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 13527.Crohn's disease.F.M


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 10579.Household control.Con.M.1


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 14986.Household control.Con.N.1


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 14999.Household control.Con.O.1


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 15789.Household control.Con.Q.1


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 15800.Household control.Con.Q.2


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 15830.Household control.Con.Q.3


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 15839.Household control.Con.Q.4


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 15841.Household control.Con.P.1


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 10577.Ulcerative colitis.F.M.2


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 10587.Ulcerative colitis.F.M.3


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 10599.Ulcerative colitis.ER.M.4


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 14978.Ulcerative colitis.F.N.2


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 15105.Ulcerative colitis.F.N.3


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 14998.Ulcerative colitis.F.O.2


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 15763.Ulcerative colitis.F.P.2


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 15767.Ulcerative colitis.ER.P.3


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 15783.Ulcerative colitis.LR.P.4


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 15787.Ulcerative colitis.LR.P.5


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 15804.Ulcerative colitis.LR.P.6


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 15821.Ulcerative colitis.LR.P.7


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 15825.Ulcerative colitis.LR.P.8


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 15828.Ulcerative colitis.LR.P.9


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 15831.Ulcerative colitis.LR.P.10


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 15834.Ulcerative colitis.LR.P.11


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 15837.Ulcerative colitis.LR.P.12


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 15777.Crohn's disease.F.Q.5


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 15785.Crohn's disease.Imp.Q.6


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 15791.Crohn's disease.Imp.Q.7


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 15802.Crohn's disease.ER.Q.8


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 15819.Crohn's disease.LR.Q.9


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 15829.Crohn's disease.LR.Q.10


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 15832.Crohn's disease.LR.Q.11


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 15838.Crohn's disease.LR.Q


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 2412.Crohn's disease.Chi


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 2414.Crohn's disease.Chi


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 2415.Crohn's disease.Chi


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 2409.Crohn's disease.Chi


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 2410.Crohn's disease.Chi


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 2411.Crohn's disease.Chi


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 2424.Ulcerative colitis.Chi


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 2413.Crohn's disease.Chi


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16089.Ulcerative colitis.Chi


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 2422.Ulcerative colitis.Chi


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 2423.Ulcerative colitis.Chi


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16092.Ulcerative colitis.Chi


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 2426.Ulcerative colitis.Chi


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 2419.Ulcerative colitis.Chi


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 13463.Ulcerative colitis.Chi


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 2417.Ulcerative colitis.Chi


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16093.Ulcerative colitis.Chi


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 13481.Ulcerative colitis.Chi


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 13484.Ulcerative colitis.Chi


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16090.Ulcerative colitis.Chi


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16095.Ulcerative colitis.Chi


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16097.Ulcerative colitis.Chi


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 13475.Ulcerative colitis.Chi


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 13478.Ulcerative colitis.Chi


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 13487.Ulcerative colitis.Chi


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 13490.Ulcerative colitis.Chi


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16094.Ulcerative colitis.Chi


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 2420.Ulcerative colitis.Chi


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 2448.Ulcerative colitis.Chi


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16096.Household control.Chi


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16098.Household control.Chi


text: public

text: human

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16047.Ulcerative colitis.Bos


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16065.Ulcerative colitis.Bos


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16058.Ulcerative colitis.Bos


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16083.Ulcerative colitis.Bos


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16069.Ulcerative colitis.Bos


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16050.Ulcerative colitis.Bos


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16064.Ulcerative colitis.Bos


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16078.Ulcerative colitis.Bos


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16062.Ulcerative colitis.Bos


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16074.Ulcerative colitis.Bos


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16068.Ulcerative colitis.Bos


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16079.Ulcerative colitis.Bos


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16070.Ulcerative colitis.Bos


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16057.Ulcerative colitis.Bos


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16067.Ulcerative colitis.Bos


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16081.Crohn's disease.Bos


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16049.Crohn's disease.Bos


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16087.Crohn's disease.Bos


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16076.Crohn's disease.Bos


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16075.Crohn's disease.Bos


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16056.Crohn's disease.Bos


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16053.Crohn's disease.Bos


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16063.Crohn's disease.Bos


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16048.Crohn's disease.Bos


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16072.Crohn's disease.Bos


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16044.Crohn's disease.Bos


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16061.Crohn's disease.Bos


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16084.Crohn's disease.Bos


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16066.Crohn's disease.Bos


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16080.Crohn's disease.Bos


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16054.Crohn's disease.Bos


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16059.Crohn's disease.Bos


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16071.Crohn's disease.Bos


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16086.Crohn's disease.Bos


text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: 16055.Crohn's disease.Bos


text: public

text: human

text: Homo sapiens

text: Homo sapiens


text: public

tag: Namespace:RIKEN Yokohama Center for Sustainable Resource Science (CSRS) Gene Discovery Research Group Cell Function Research Team

text: ArrayExpress

text: thale cress

text: Protocols: About 5 mm root tips of 7 day old plants were collected using a razor blade and flash frozen in liquid nitrogen. Plants were grown on plates containing Murashige and Skoog (MS) salts, 1% sucrose (w/v), and 0.6% phytagel (w/v) at 22°C under the photoperiod of 16 h light and 8 h dark. RNA was extracted using the plant RNeasy kit (Qiagen) according to the manufacturers guidelines RNA samples were reverse transcribed and their libraries were constructed with the TruSeq kit (Illumina) according to manufacturers instructions

characteristic: description

text: dexamethasone

characteristic: growth condition

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: root tip

characteristic: organism part

text: Arabidopsis thaliana

unit: hour

characteristic: time


text: RIKEN Yokohama Center for Sustainable Resource Science (CSRS) Gene Discovery Research Group Cell Function Research Team

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: thale cress

text: dexamethasone

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: root tip

text: Arabidopsis thaliana


text: public

text: ArrayExpress

text: thale cress

characteristic: common name

characteristic: genotype

text: 12 h ethanol

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: root tip

text: Arabidopsis thaliana


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: ArrayExpress

text: thale cress

text: 24 h ethanol

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: root tip

text: Arabidopsis thaliana

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPI-EVA

characteristic: INSDC center name

text: public

text: Homo sapiens neanderthalensis

text: Homo sapiens neanderthalensis

text: Mitochondrial DNA sequences of hominins from Grotte du Renne


text: UNIVERSITY OF BASEL

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:UNIVERSITY OF BASEL

text: Clinical Isolate

characteristic: description

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis


text: public

tag: Namespace:Vesalius Research Center, VIB Laboratory of Translational Genetics Department of Oncology, KU Leuven

text: ArrayExpress

text: endothelial cell

characteristic: cell type

text: house mouse

text: Protocols: Mouse endothelial cells were isolated from perfused healthy liver (for normal endothelial cells, NECs) or liver containing B16-F10 tumors (tumor endothelial cells, TECs). Since the tumor-infested liver consisted for 60-80% of tumor tissue, the EC population isolated from these livers was highly enriched in TECs (therefore referred to as “eTECs”). The purity of cultured endothelial cells was determined by morphological analysis (by phase-contrast microscopy) and by PCR amplification for the EC-enriched surface markers Pecam1 and Eng, and genes enriched in pericytes (Pdgfrb), smooth muscle cells and fibroblasts (A, Pdgfra) and leukocytes (Ptprc). In addition, FACS analysis confirmed that >95% of cultured cells were CD31+ CD102+ CD11b- ECs. Potential contamination of cancer cells was evaluated by FACS using mCherry+ B16 cells (<2% of the total EC population). RNA extraction was performed using the Trizol reagent. RNA libraries were created using the Illumina TruSeq RNA sample preparation kit V2 according to the manufacturer’s instructions.

text: normal

characteristic: disease

text: Mus musculus

text: Mus musculus

text: liver

characteristic: organism part

text: Mus musculus


text: Vesalius Research Center, VIB Laboratory of Translational Genetics Department of Oncology, KU Leuven

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: endothelial cell

text: house mouse

text: normal

text: Mus musculus

text: Mus musculus

text: liver

text: Mus musculus


text: public

text: ArrayExpress

characteristic: broker name

text: endothelial cell

text: house mouse

characteristic: common name

text: cancer

text: Mus musculus

text: Mus musculus

text: liver

text: Mus musculus


ERCC cDNA PacBio RS II

characteristic: ENA-CHECKLIST

text: public

text: ERCC cDNA PacBio RS II

tag: Namespace:McGill University and Genome Quebec Innovation Centre

text: ERCC cDNA PacBio RS II

text: synthetic construct

characteristic: organism

text: synthetic construct

text: ERCC cDNA PacBio RS II


characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

characteristic: altitude

text: False

text: 12/4/14 12:00

text: bioreactor metagenome

text: GAZ:United States of America

characteristic: country

characteristic: depth

text: True

text: Inoculum

characteristic: elevation

text: ENVO:urban biome

characteristic: env biome

text: ENVO:anaerobic bioreactor

characteristic: env feature

text: ENVO:anaerobic sludge

characteristic: env matter

text: True

text: True

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: bioreactor metagenome

text: Inoculum

characteristic: phase

text: Ithaca

text: Cornell

text: True

text: completed

characteristic: sample size

text: anaerobic reactor biomass

characteristic: sample type

text: sequenced (16S)

text: bioreactor metagenome

text: Wine waste resource recovery with a reactor microbiome: n-caprylate and n-caproate production from wine lees

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: False

text: 6/18/14 12:00

text: bioreactor metagenome

characteristic: common name

text: GAZ:United States of America

characteristic: description

text: True

text: Subtrate

text: ENVO:urban biome

text: ENVO:anaerobic bioreactor

text: ENVO:anaerobic sludge

text: True

text: True

text: bioreactor metagenome

characteristic: organism

text: Subtrate

text: Ithaca

text: Cornell

text: True

text: completed

text: anaerobic reactor biomass

text: sequenced (16S)

text: bioreactor metagenome


characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

characteristic: altitude

text: False

text: 3/23/15 12:00

text: bioreactor metagenome

text: GAZ:United States of America

characteristic: country

characteristic: depth

text: True

characteristic: elevation

text: ENVO:urban biome

characteristic: env biome

text: ENVO:anaerobic bioreactor

characteristic: env feature

text: ENVO:anaerobic sludge

characteristic: env matter

text: True

text: True

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: bioreactor metagenome

text: Batch

text: Ithaca

text: Cornell

text: True

text: completed

text: anaerobic reactor biomass

text: sequenced (16S)

text: bioreactor metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: False

text: 3/31/15 12:00

text: bioreactor metagenome

text: GAZ:United States of America

text: True

text: ENVO:urban biome

text: ENVO:anaerobic bioreactor

text: ENVO:anaerobic sludge

text: True

text: True

text: bioreactor metagenome

text: Batch

characteristic: phase

text: Ithaca

text: Cornell

text: True

text: completed

characteristic: sample size

text: anaerobic reactor biomass

characteristic: sample type

text: sequenced (16S)

text: bioreactor metagenome

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

characteristic: Submitter Id

characteristic: altitude

text: False

text: 4/8/15 12:00

text: bioreactor metagenome

characteristic: common name

text: GAZ:United States of America

characteristic: country

characteristic: depth

characteristic: description

text: True

characteristic: elevation

text: ENVO:urban biome

characteristic: env biome

text: ENVO:anaerobic bioreactor

characteristic: env feature

text: ENVO:anaerobic sludge

characteristic: env matter

text: True

text: True

text: bioreactor metagenome

characteristic: organism

text: Batch

text: Ithaca

text: Cornell

text: True

text: completed

text: anaerobic reactor biomass

text: sequenced (16S)

text: bioreactor metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: False

text: 4/16/15 12:00

text: bioreactor metagenome

text: GAZ:United States of America

text: True

text: ENVO:urban biome

text: ENVO:anaerobic bioreactor

text: ENVO:anaerobic sludge

text: True

text: True

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: bioreactor metagenome

text: Semi-continuous

text: Ithaca

text: Cornell

text: True

text: completed

text: anaerobic reactor biomass

text: sequenced (16S)

text: bioreactor metagenome


characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

characteristic: Submitter Id

characteristic: altitude

text: False

text: 4/24/15 12:00

text: bioreactor metagenome

characteristic: common name

text: GAZ:United States of America

characteristic: country

characteristic: depth

characteristic: description

text: True

characteristic: elevation

text: ENVO:urban biome

text: ENVO:anaerobic bioreactor

text: ENVO:anaerobic sludge

text: True

text: True

text: bioreactor metagenome

text: Semi-continuous

characteristic: phase

text: Ithaca

text: Cornell

text: True

text: completed

characteristic: sample size

text: anaerobic reactor biomass

characteristic: sample type

text: sequenced (16S)

text: bioreactor metagenome

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: False

text: 5/4/15 12:00

text: bioreactor metagenome

text: GAZ:United States of America

text: True

text: ENVO:urban biome

characteristic: env biome

text: ENVO:anaerobic bioreactor

characteristic: env feature

text: ENVO:anaerobic sludge

characteristic: env matter

text: True

text: True

text: bioreactor metagenome

characteristic: organism

text: Semi-continuous

text: Ithaca

text: Cornell

text: True

text: completed

text: anaerobic reactor biomass

text: sequenced (16S)

text: bioreactor metagenome


characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

characteristic: Submitter Id

characteristic: altitude

text: False

text: 5/14/15 12:00

text: bioreactor metagenome

characteristic: common name

text: GAZ:United States of America

characteristic: country

characteristic: depth

characteristic: description

text: True

characteristic: elevation

text: ENVO:urban biome

text: ENVO:anaerobic bioreactor

text: ENVO:anaerobic sludge

text: True

text: True

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: bioreactor metagenome

text: Semi-continuous

text: Ithaca

text: Cornell

text: True

text: completed

text: anaerobic reactor biomass

text: sequenced (16S)

text: bioreactor metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: False

text: 5/26/15 0:00

text: bioreactor metagenome

text: GAZ:United States of America

text: True

text: ENVO:urban biome

text: ENVO:anaerobic bioreactor

text: ENVO:anaerobic sludge

text: True

text: True

text: bioreactor metagenome

text: Semi-continuous

characteristic: phase

text: Ithaca

text: Cornell

text: True

text: completed

characteristic: sample size

text: anaerobic reactor biomass

characteristic: sample type

text: sequenced (16S)

text: bioreactor metagenome

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

characteristic: Submitter Id

characteristic: altitude

text: False

text: 6/5/15 12:00

text: bioreactor metagenome

characteristic: common name

text: GAZ:United States of America

characteristic: country

characteristic: depth

characteristic: description

text: True

characteristic: elevation

text: ENVO:urban biome

characteristic: env biome

text: ENVO:anaerobic bioreactor

characteristic: env feature

text: ENVO:anaerobic sludge

characteristic: env matter

text: True

text: True

text: bioreactor metagenome

characteristic: organism

text: Semi-continuous

text: Ithaca

text: Cornell

text: True

text: completed

text: anaerobic reactor biomass

text: sequenced (16S)

text: bioreactor metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: False

text: 6/15/15 12:00

text: bioreactor metagenome

text: GAZ:United States of America

text: True

text: ENVO:urban biome

text: ENVO:anaerobic bioreactor

text: ENVO:anaerobic sludge

text: True

text: True

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: bioreactor metagenome

text: Semi-continuous

text: Ithaca

text: Cornell

text: True

text: completed

text: anaerobic reactor biomass

text: sequenced (16S)

text: bioreactor metagenome


characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

characteristic: Submitter Id

text: n

characteristic: antiexposedall

characteristic: day of life

text: Vaginal

characteristic: delivery

characteristic: description

text: bd

characteristic: diet

text: bd

text: eb

text: True

characteristic: elevation

text: urban biome

text: human-associated habitat

text: USA:NY:NYC

characteristic: geo loc name

text: C

text: False

text: False

characteristic: month

text: human gut metagenome

text: NYUMC

text: True

characteristic: sample summary

characteristic: sample type

characteristic: sampletype

text: human gut metagenome

text: Female

characteristic: sex

characteristic: studyid

characteristic: title

text: ECAM: Antibiotics, birth mode, and diet shape microbiome maturation during early life


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pre

text: n

text: Vaginal

text: bd

text: bd

text: eb

text: True

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: USA:NY:NYC

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: C

text: False

text: False

text: human gut metagenome

characteristic: organism

text: NYUMC

text: True

text: human gut metagenome

text: Female


characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

characteristic: Submitter Id

text: Cephalexin

text: post

text: y

characteristic: antiexposedall

characteristic: day of life

text: Vaginal

characteristic: delivery

characteristic: description

text: bd

characteristic: diet

text: bd

text: eb

text: True

characteristic: elevation

text: urban biome

text: human-associated habitat

text: USA:NY:NYC

characteristic: geo loc name

text: C

text: False

text: False

characteristic: month

text: human gut metagenome

text: NYUMC

text: True

characteristic: sample summary

characteristic: sample type

characteristic: sampletype

text: human gut metagenome

text: Female

characteristic: sex


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: post

text: y

text: Vaginal

text: bd

text: bd

text: eb

text: True

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: USA:NY:NYC

characteristic: host subject id

characteristic: latitude

text: C

text: False

text: False

text: human gut metagenome

text: NYUMC

text: True

text: human gut metagenome

text: Female

characteristic: studyid

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

characteristic: Submitter Id

text: y

characteristic: antiexposedall

characteristic: day of life

text: Vaginal

characteristic: delivery

characteristic: description

text: bd

characteristic: diet

text: bd

text: eb

text: True

characteristic: elevation

text: urban biome

text: human-associated habitat

text: USA:NY:NYC

characteristic: geo loc name

characteristic: longitude

text: C

text: False

text: False

characteristic: month

text: human gut metagenome

characteristic: organism

text: NYUMC

text: True

characteristic: sample summary

characteristic: sample type

text: human gut metagenome

text: Female


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Amoxicillin

text: pre

text: y

text: Vaginal

text: bd

text: bd

text: eb

text: True

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: USA:NY:NYC

characteristic: host subject id

characteristic: latitude

text: C

text: False

text: False

text: human gut metagenome

text: NYUMC

text: True

characteristic: sampletype

text: human gut metagenome

text: Female

characteristic: sex


characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

characteristic: Submitter Id

text: Amoxicillin

text: mid

text: y

characteristic: antiexposedall

characteristic: day of life

text: Vaginal

characteristic: delivery

characteristic: description

text: bd

characteristic: diet

text: bd

text: eb

text: True

characteristic: elevation

text: urban biome

text: human-associated habitat

text: USA:NY:NYC

characteristic: geo loc name

characteristic: longitude

text: C

text: False

text: False

characteristic: month

text: human gut metagenome

characteristic: organism

text: NYUMC

text: True

text: human gut metagenome

text: Female

characteristic: studyid

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Amoxicillin

text: post

text: y

text: Vaginal

text: bd

text: bd

text: eb

text: True

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: USA:NY:NYC

characteristic: host subject id

characteristic: latitude

text: C

text: False

text: False

text: human gut metagenome

text: NYUMC

text: True

characteristic: sample summary

characteristic: sample type

text: human gut metagenome

text: Female


characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

characteristic: Submitter Id

text: Metronidazole

text: mid

text: y

characteristic: antiexposedall

characteristic: day of life

text: Vaginal

characteristic: delivery

characteristic: description

text: bd

characteristic: diet

text: bd

text: eb

text: True

characteristic: elevation

text: urban biome

text: human-associated habitat

text: USA:NY:NYC

characteristic: geo loc name

characteristic: longitude

text: C

text: False

text: False

characteristic: month

text: human gut metagenome

characteristic: organism

text: NYUMC

text: True

characteristic: sampletype

text: human gut metagenome

text: Female

characteristic: sex


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Metronidazole

text: post

text: y

text: Vaginal

text: bd

text: bd

text: eb

text: True

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: USA:NY:NYC

characteristic: host subject id

characteristic: latitude

text: C

text: False

text: False

text: human gut metagenome

text: NYUMC

text: True

text: human gut metagenome

text: Female

characteristic: studyid

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

characteristic: Submitter Id

text: Augmentin

text: mid

text: y

characteristic: antiexposedall

characteristic: day of life

text: Vaginal

characteristic: delivery

characteristic: description

text: bd

characteristic: diet

text: bd

text: eb

text: True

characteristic: elevation

text: urban biome

text: human-associated habitat

text: USA:NY:NYC

characteristic: geo loc name

characteristic: longitude

text: C

text: False

text: False

characteristic: month

text: human gut metagenome

characteristic: organism

text: NYUMC

text: True

characteristic: sample summary

characteristic: sample type

text: human gut metagenome

text: Female


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Augmentin

text: post

text: y

text: Vaginal

text: bd

text: bd

text: eb

text: True

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: USA:NY:NYC

characteristic: host subject id

characteristic: latitude

text: C

text: False

text: False

text: human gut metagenome

text: NYUMC

text: True

characteristic: sampletype

text: human gut metagenome

text: Female

characteristic: sex


characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

characteristic: Submitter Id

text: Azithromycin

text: pre

text: y

characteristic: antiexposedall

characteristic: day of life

text: Vaginal

characteristic: delivery

characteristic: description

text: bd

characteristic: diet

text: bd

text: eb

text: True

characteristic: elevation

text: urban biome

text: human-associated habitat

text: USA:NY:NYC

characteristic: geo loc name

characteristic: longitude

text: C

text: False

text: False

characteristic: month

text: human gut metagenome

characteristic: organism

text: NYUMC

text: True

text: human gut metagenome

text: Female

characteristic: studyid

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Azithromycin

text: mid

text: y

text: Vaginal

text: bd

text: bd

text: eb

text: True

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: USA:NY:NYC

characteristic: host subject id

characteristic: latitude

text: C

text: False

text: False

text: human gut metagenome

text: NYUMC

text: True

characteristic: sample summary

characteristic: sample type

text: human gut metagenome

text: Female


characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

characteristic: Submitter Id

text: Azithromycin

text: post

text: y

characteristic: antiexposedall

characteristic: day of life

text: Vaginal

characteristic: delivery

characteristic: description

text: bd

characteristic: diet

text: bd

text: eb

text: True

characteristic: elevation

text: urban biome

text: human-associated habitat

text: USA:NY:NYC

characteristic: geo loc name

characteristic: longitude

text: C

text: False

text: False

characteristic: month

text: human gut metagenome

characteristic: organism

text: NYUMC

text: True

characteristic: sampletype

text: human gut metagenome

text: Female

characteristic: sex


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: n

text: Cesarean

text: bd

text: bd

text: eb

text: True

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: USA:NY:NYC

characteristic: host subject id

characteristic: latitude

text: C

text: True

text: True

text: nitrofuran

text: human gut metagenome

text: NYUMC

text: True

text: Repeats

text: Repeats

text: human gut metagenome

text: Male

characteristic: studyid

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

characteristic: Submitter Id

text: n

characteristic: antiexposedall

characteristic: day of life

text: Cesarean

characteristic: delivery

characteristic: description

text: bd

characteristic: diet

text: bd

text: eb

text: True

characteristic: elevation

text: urban biome

text: human-associated habitat

text: USA:NY:NYC

characteristic: geo loc name

characteristic: longitude

text: C

text: True

text: True

text: nitrofuran

characteristic: month

text: human gut metagenome

characteristic: organism

text: NYUMC

text: True

characteristic: sample summary

characteristic: sample type

text: human gut metagenome

text: Male


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: n

text: Cesarean

text: bd

text: bd

text: eb

text: True

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: USA:NY:NYC

characteristic: host subject id

characteristic: latitude

text: C

text: True

text: True

text: nitrofuran

text: human gut metagenome

text: NYUMC

text: True

characteristic: sampletype

text: human gut metagenome

text: Male

characteristic: sex


characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

characteristic: Submitter Id

text: n

characteristic: antiexposedall

characteristic: day of life

text: Cesarean

characteristic: delivery

characteristic: description

text: bd

characteristic: diet

text: bd

text: eb

text: True

characteristic: elevation

text: urban biome

text: human-associated habitat

text: USA:NY:NYC

characteristic: geo loc name

characteristic: longitude

text: C

text: True

text: True

text: beta-lactam

characteristic: month

text: human gut metagenome

characteristic: organism

text: NYUMC

text: True

text: human gut metagenome

text: Male

characteristic: studyid

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: n

text: Cesarean

text: bd

text: bd

text: eb

text: True

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: USA:NY:NYC

characteristic: host subject id

characteristic: latitude

text: C

text: True

text: True

text: beta-lactam

text: human gut metagenome

text: NYUMC

text: True

characteristic: sample summary

characteristic: sample type

text: human gut metagenome

text: Male


characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

characteristic: Submitter Id

text: pre

text: Clindamycin

text: pre

text: n

characteristic: antiexposedall

characteristic: day of life

text: Cesarean

characteristic: delivery

characteristic: description

text: bd

characteristic: diet

text: bd

text: eb

text: True

characteristic: elevation

text: urban biome

text: human-associated habitat

text: USA:NY:NYC

characteristic: geo loc name

characteristic: longitude

text: C

text: True

text: True

text: beta-lactam

characteristic: month

text: human gut metagenome

characteristic: organism

text: NYUMC

text: True

characteristic: sampletype

text: human gut metagenome

text: Male

characteristic: sex


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: mid

text: Clindamycin

text: mid

text: y

text: Cesarean

text: bd

text: bd

text: eb

text: True

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: USA:NY:NYC

characteristic: host subject id

characteristic: latitude

text: C

text: True

text: True

text: beta-lactam

text: human gut metagenome

text: NYUMC

text: True

text: human gut metagenome

text: Male

characteristic: studyid

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

characteristic: Submitter Id

text: Clindamycin

text: post

text: y

characteristic: antiexposedall

characteristic: day of life

text: Cesarean

characteristic: delivery

characteristic: description

text: bd

characteristic: diet

text: bd

text: eb

text: True

characteristic: elevation

text: urban biome

text: human-associated habitat

text: USA:NY:NYC

characteristic: geo loc name

characteristic: longitude

text: C

text: True

text: True

text: beta-lactam

characteristic: month

text: human gut metagenome

characteristic: organism

text: NYUMC

text: True

characteristic: sample summary

characteristic: sample type

text: human gut metagenome

text: Male


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Amoxicillin

text: mid

text: y

text: Cesarean

text: bd

text: bd

text: eb

text: True

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: USA:NY:NYC

characteristic: host subject id

characteristic: latitude

text: C

text: True

text: True

text: beta-lactam

text: human gut metagenome

text: NYUMC

text: True

characteristic: sampletype

text: human gut metagenome

text: Male

characteristic: sex


characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

characteristic: Submitter Id

text: Amoxicillin

text: post

text: y

characteristic: antiexposedall

characteristic: day of life

text: Cesarean

characteristic: delivery

characteristic: description

text: bd

characteristic: diet

text: bd

text: eb

text: True

characteristic: elevation

text: urban biome

text: human-associated habitat

text: USA:NY:NYC

characteristic: geo loc name

characteristic: longitude

text: C

text: True

text: True

text: beta-lactam

characteristic: month

text: human gut metagenome

characteristic: organism

text: NYUMC

text: True

text: human gut metagenome

text: Male

characteristic: studyid

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: y

text: Cesarean

text: bd

text: bd

text: eb

text: True

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: USA:NY:NYC

characteristic: host subject id

characteristic: latitude

text: C

text: True

text: True

text: beta-lactam

text: human gut metagenome

text: NYUMC

text: True

characteristic: sample summary

characteristic: sample type

text: human gut metagenome

text: Male


characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

characteristic: Submitter Id

text: n

characteristic: antiexposedall

characteristic: day of life

text: Cesarean

characteristic: delivery

characteristic: description

text: fd

characteristic: diet

text: fd

text: fd

text: True

characteristic: elevation

text: urban biome

text: human-associated habitat

text: USA:NY:NYC

characteristic: geo loc name

characteristic: longitude

text: C

text: True

text: False

characteristic: month

text: human gut metagenome

characteristic: organism

text: NYUMC

text: True

text: Repeats

text: Repeats

characteristic: sampletype

text: human gut metagenome

text: Female

characteristic: sex


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: n

text: Cesarean

text: fd

text: fd

text: fd

text: True

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: USA:NY:NYC

characteristic: host subject id

characteristic: latitude

text: C

text: True

text: False

text: human gut metagenome

text: NYUMC

text: True

text: human gut metagenome

text: Female

characteristic: studyid

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

characteristic: Submitter Id

text: n

characteristic: antiexposedall

characteristic: day of life

text: Cesarean

characteristic: delivery

characteristic: description

text: bd

characteristic: diet

text: bd

text: eb

text: True

characteristic: elevation

text: urban biome

text: human-associated habitat

text: USA:NY:NYC

characteristic: geo loc name

characteristic: longitude

text: C

text: True

text: False

characteristic: month

text: human gut metagenome

characteristic: organism

text: NYUMC

text: True

characteristic: sample summary

characteristic: sample type

text: human gut metagenome

text: Male


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: n

text: Cesarean

text: bd

text: bd

text: eb

text: True

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: USA:NY:NYC

characteristic: host subject id

characteristic: latitude

text: C

text: True

text: False

text: human gut metagenome

text: NYUMC

text: True

characteristic: sampletype

text: human gut metagenome

text: Male

characteristic: sex


characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

characteristic: Submitter Id

text: pre

text: Cefdinir

text: pre

text: n

characteristic: antiexposedall

characteristic: day of life

text: Cesarean

characteristic: delivery

characteristic: description

text: bd

characteristic: diet

text: bd

text: eb

text: True

characteristic: elevation

text: urban biome

text: human-associated habitat

text: USA:NY:NYC

characteristic: geo loc name

characteristic: longitude

text: C

text: True

text: False

characteristic: month

text: human gut metagenome

characteristic: organism

text: NYUMC

text: True

text: human gut metagenome

text: Male

characteristic: studyid

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: mid

text: Cefdinir

text: mid

text: y

text: Cesarean

text: bd

text: bd

text: eb

text: True

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: USA:NY:NYC

characteristic: host subject id

characteristic: latitude

text: C

text: True

text: False

text: human gut metagenome

text: NYUMC

text: True

characteristic: sample summary

characteristic: sample type

text: human gut metagenome

text: Male


characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

characteristic: Submitter Id

text: Cefdinir

text: mid

text: y

characteristic: antiexposedall

characteristic: day of life

text: Cesarean

characteristic: delivery

characteristic: description

text: bd

characteristic: diet

text: bd

text: eb

text: True

characteristic: elevation

text: urban biome

text: human-associated habitat

text: USA:NY:NYC

characteristic: geo loc name

characteristic: longitude

text: C

text: True

text: False

characteristic: month

text: human gut metagenome

characteristic: organism

text: NYUMC

text: True

characteristic: sampletype

text: human gut metagenome

text: Male

characteristic: sex


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: post

text: Cefdinir

text: post

text: y

text: Cesarean

text: bd

text: bd

text: eb

text: True

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: USA:NY:NYC

characteristic: host subject id

characteristic: latitude

text: C

text: True

text: False

text: human gut metagenome

text: NYUMC

text: True

text: human gut metagenome

text: Male

characteristic: studyid

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

characteristic: Submitter Id

text: y

characteristic: antiexposedall

characteristic: day of life

text: Cesarean

characteristic: delivery

characteristic: description

text: bd

characteristic: diet

text: bd

text: eb

text: True

characteristic: elevation

text: urban biome

text: human-associated habitat

text: USA:NY:NYC

characteristic: geo loc name

characteristic: longitude

text: C

text: True

text: False

characteristic: month

text: human gut metagenome

characteristic: organism

text: NYUMC

text: True

characteristic: sample summary

characteristic: sample type

text: human gut metagenome

text: Male


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: y

text: Cesarean

text: bd

text: bd

text: eb

text: True

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: USA:NY:NYC

characteristic: host subject id

characteristic: latitude

text: C

text: True

text: False

text: human gut metagenome

text: NYUMC

text: True

characteristic: sampletype

text: human gut metagenome

text: Male

characteristic: sex


characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

characteristic: Submitter Id

text: n

characteristic: antiexposedall

characteristic: day of life

text: Vaginal

characteristic: delivery

characteristic: description

text: bd

characteristic: diet

text: bd

text: eb

text: True

characteristic: elevation

text: urban biome

text: human-associated habitat

text: USA:NY:NYC

characteristic: geo loc name

characteristic: longitude

text: C

text: False

text: False

characteristic: month

text: human gut metagenome

characteristic: organism

text: NYUMC

text: True

text: human gut metagenome

text: Male

characteristic: studyid

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: n

text: Vaginal

text: bd

text: bd

text: eb

text: True

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: USA:NY:NYC

characteristic: host subject id

characteristic: latitude

text: C

text: False

text: False

text: human gut metagenome

text: NYUMC

text: True

characteristic: sample summary

characteristic: sample type

text: human gut metagenome

text: Male


characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

characteristic: Submitter Id

text: pre

text: Azithromycin

text: pre

text: n

characteristic: antiexposedall

characteristic: day of life

text: Vaginal

characteristic: delivery

characteristic: description

text: bd

characteristic: diet

text: bd

text: eb

text: True

characteristic: elevation

text: urban biome

text: human-associated habitat

text: USA:NY:NYC

characteristic: geo loc name

characteristic: longitude

text: C

text: False

text: False

characteristic: month

text: human gut metagenome

characteristic: organism

text: NYUMC

text: True

characteristic: sampletype

text: human gut metagenome

text: Male

characteristic: sex


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: mid

text: Azithromycin

text: mid

text: y

text: Vaginal

text: bd

text: bd

text: eb

text: True

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: USA:NY:NYC

characteristic: host subject id

characteristic: latitude

text: C

text: False

text: False

text: human gut metagenome

text: NYUMC

text: True

text: human gut metagenome

text: Male

characteristic: studyid

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

characteristic: Submitter Id

text: Azithromycin

text: mid

text: y

characteristic: antiexposedall

characteristic: day of life

text: Vaginal

characteristic: delivery

characteristic: description

text: bd

characteristic: diet

text: bd

text: eb

text: True

characteristic: elevation

text: urban biome

text: human-associated habitat

text: USA:NY:NYC

characteristic: geo loc name

characteristic: longitude

text: C

text: False

text: False

characteristic: month

text: human gut metagenome

characteristic: organism

text: NYUMC

text: True

characteristic: sample summary

characteristic: sample type

text: human gut metagenome

text: Male