E-MTAB-4639:Sample 2

characteristic: ENA-FIRST-PUBLIC

text: Laboratory of Molecular Medicine and Genomics Department of Medicine and Surgery University of Salerno

text: public

text: E-MTAB-4639:Sample 2

text: ArrayExpress

text: human

text: breast carcinoma

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Sample 2


E-MTAB-4639:Sample 3

status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-4639:Sample 3

tag: Namespace:Laboratory of Molecular Medicine and Genomics Department of Medicine and Surgery University of Salerno

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: human

characteristic: common name

text: Protocols: C-TAP-ERβ and MCF7 Tet-Off control cells were hormone-deprived for 5 days as previously described, collected and lysed with Polysome lysis buffer following the procedure reported in Keene et al (Keene et al., 2006). An aliquot of whole-cell extract (10% of total) was taken as input while each assay of immunoprecipitation was performed starting from 2mg of total protein lysate. For ERβ immunoprecipitation, samples were incubated at 4°C for 3 hours with 50μl of IgG Sepharose 6 fast Flow (GE Healthcare Bio-Science AB) pre-treated with NT2 buffer supplemented with 5% BSA. After bound, the isolation of RNA immunoprecipitated with ERβ was carried out by adding TRIzol (Life Technologies) directly to the washed beads, following the manufacturer’s instructions C-TAP-ERβ and MCF7 Tet-Off control cells were hormone-deprived for 5 days as previously described, collected and lysed with Polysome lysis buffer following the procedure reported in Keene et al (Keene et al., 2006). An aliquot of whole-cell extract (10% of total) was taken as input while each assay of immunoprecipitation was performed starting from 2mg of total protein lysate. For ERβ immunoprecipitation, samples were incubated at 4°C for 3 hours with 50μl of IgG Sepharose 6 fast Flow (GE Healthcare Bio-Science AB) pre-treated with NT2 buffer supplemented with 5% BSA. After bound, the isolation of RNA immunoprecipitated with ERβ was carried out by adding TRIzol (Life Technologies) directly to the washed beads, following the manufacturer’s instructions libraries were generated from 120ng of the same pooled RNA using TruSeq Small RNA Sample Prep Kits (Illumina Inc.)

characteristic: description

text: breast carcinoma

characteristic: disease

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Homo sapiens

text: Sample 3

characteristic: title

type: has member


E-MTAB-4639:Sample 4

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-4639:Sample 4

text: ArrayExpress

text: human

text: breast carcinoma

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Sample 4


E-MTAB-4639:Sample 5

characteristic: ENA-CHECKLIST

text: public

text: E-MTAB-4639:Sample 5

text: ArrayExpress

text: human

text: breast carcinoma

text: expression of estrogen receptor fused to C terminus tandem affinity purification tag

characteristic: genotype

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Sample 5


E-MTAB-4639:Sample 6

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-4639:Sample 6

text: ArrayExpress

text: human

text: breast carcinoma

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Sample 6


E-MTAB-4639:Sample 7

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-4639:Sample 7

text: ArrayExpress

text: human

text: breast carcinoma

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Sample 7


E-MTAB-4639:Sample 8

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-4639:Sample 8

text: ArrayExpress

text: human

text: breast carcinoma

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Sample 8


E-MTAB-4638:Sample 1

text: public

characteristic: SRA accession

text: E-MTAB-4638:Sample 1

tag: Namespace:Laboratory of Molecular Medicine and Genomics Department of Medicine  and Surgery, University of Salerno

characteristic: Submitter Id

text: ArrayExpress

text: human

text: Protocols: C-TAP-ERβ and MCF7 Tet-Off control cells were hormone-deprived for 5 days as previously described, collected and lysed with Polysome lysis buffer following the procedure reported in Keene et al (Keene et al., 2006). An aliquot of whole-cell extract (10% of total) was taken as input while each assay of immunoprecipitation was performed starting from 2mg of total protein lysate. For ERβ immunoprecipitation, samples were incubated at 4°C for 3 hours with 50μl of IgG Sepharose 6 fast Flow (GE Healthcare Bio-Science AB) pre-treated with NT2 buffer supplemented with 5% BSA. After bound, the isolation of RNA immunoprecipitated with ERβ was carried out by adding TRIzol (Life Technologies) directly to the washed beads, following the manufacturer’s instructions indexed sequencing libraries were preparated starting from 1μg of RNA input and 300 ng of RNA immunoprecipitated, pooling three indipendent experiments (biological replicates) and using TruSeq Stranded Total RNA

text: breast carcinoma

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Sample 1


E-MTAB-4638:Sample 10

text: Laboratory of Molecular Medicine and Genomics Department of Medicine and Surgery, University of Salerno

text: public

text: E-MTAB-4638:Sample 10

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: human

text: breast carcinoma

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Sample 10


E-MTAB-4638:Sample 11

text: public

text: E-MTAB-4638:Sample 11

text: ArrayExpress

text: human

characteristic: common name

characteristic: description

text: breast carcinoma

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Sample 11


E-MTAB-4638:Sample 12

text: public

text: E-MTAB-4638:Sample 12

text: ArrayExpress

text: human

text: breast carcinoma

characteristic: disease

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Homo sapiens

text: Sample 12


E-MTAB-4638:Sample 2

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-4638:Sample 2

text: ArrayExpress

text: human

text: breast carcinoma

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Sample 2

characteristic: title


E-MTAB-4638:Sample 3

characteristic: ENA-CHECKLIST

text: public

text: E-MTAB-4638:Sample 3

text: ArrayExpress

text: human

text: breast carcinoma

characteristic: genotype

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Sample 3


E-MTAB-4638:Sample 4

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-4638:Sample 4

text: ArrayExpress

text: human

text: breast carcinoma

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Sample 4


E-MTAB-4638:Sample 5

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-4638:Sample 5

text: ArrayExpress

text: human

text: breast carcinoma

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Sample 5


E-MTAB-4638:Sample 6

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-4638:Sample 6

text: ArrayExpress

text: human

text: breast carcinoma

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Sample 6


E-MTAB-4638:Sample 7

text: public

characteristic: SRA accession

text: E-MTAB-4638:Sample 7

characteristic: Submitter Id

text: ArrayExpress

text: human

text: breast carcinoma

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Sample 7


E-MTAB-4638:Sample 8

text: public

text: E-MTAB-4638:Sample 8

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: human

text: breast carcinoma

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Sample 8


E-MTAB-4638:Sample 9

text: public

text: E-MTAB-4638:Sample 9

text: ArrayExpress

text: human

characteristic: common name

characteristic: description

text: breast carcinoma

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Sample 9


text: UCSDMI

text: public

characteristic: age

text: years

characteristic: age unit

characteristic: anonymized name

text: UBERON:feces

characteristic: body habitat

characteristic: body mass index

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: human gut metagenome

text: USA:OK

characteristic: country

text: True

characteristic: elevation

text: dense settlement biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: ENVO:feces

characteristic: env matter

text: human-gut

characteristic: env package

text: feces

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: human gut metagenome

characteristic: organism

text: Lewis lab OU

text: True

text: stool

characteristic: sample type

text: human gut metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Research Centre for Natural Sciences

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Research Centre for Natural Sciences

characteristic: Submitter Id

text: chicken

characteristic: common name

text: Starting clone of the homozygous BRCA1 mutant (DT40 cell line)

characteristic: description

text: Gallus gallus

unit: bp

characteristic: read length

text: Gallus gallus

text: Homozygous BRCA1 mutant starting clone

characteristic: title


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Starting clone of the heterozygous BRCA1 mutant (DT40 cell line)

text: Gallus gallus

text: Gallus gallus

text: Heterozygous BRCA1 mutant starting clone


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single heterozygous BRCA1 mutant DT40 cell clone isolated following a methyl methanesulfonate treatment regime

text: Gallus gallus

text: Gallus gallus

text: MMS treated heterozygous BRCA1 mutant clone 1


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single homozygous BRCA1 mutant DT40 cell clone isolated following a mock treatment regime

text: Gallus gallus

text: Gallus gallus

text: Mock treated homozygous BRCA1 mutant clone 1


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: Mock treated homozygous BRCA1 mutant clone 2


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: Mock treated homozygous BRCA1 mutant clone 3


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single homozygous BRCA1 mutant DT40 cell clone isolated following a methyl methanesulfonate treatment regime

text: Gallus gallus

text: Gallus gallus

text: MMS treated homozygous BRCA1 mutant clone 1


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: MMS treated homozygous BRCA1 mutant clone 2


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: MMS treated homozygous BRCA1 mutant clone 3


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single heterozygous BRCA1 mutant DT40 cell clone isolated following a mock treatment regime

text: Gallus gallus

text: Gallus gallus

text: Mock treated heterozygous BRCA1 mutant clone 2


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: MMS treated heterozygous BRCA1 mutant clone 2


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: MMS treated heterozygous BRCA1 mutant clone 3


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Starting clone of the PCNAK164R mutant (DT40 cell line)

text: Gallus gallus

text: Gallus gallus

text: PCNAK164R mutant starting clone


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single PCNAK164R mutant DT40 cell clone isolated following a mock treatment regime

text: Gallus gallus

text: Gallus gallus

text: Mock treated PCNAK164R mutant clone 1


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single PCNAK164R mutant DT40 cell clone isolated following a methyl methanesulfonate treatment regime

text: Gallus gallus

text: Gallus gallus

text: MMS treated PCNAK164R mutant clone 1


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: Mock treated heterozygous BRCA1 mutant clone 3


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Starting clone of the homozygous BRCA2 mutant (DT40 cell line)

text: Gallus gallus

text: Gallus gallus

text: Homozygous BRCA2 mutant starting clone


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single homozygous BRCA2 mutant DT40 cell clone isolated following a mock treatment regime

text: Gallus gallus

text: Gallus gallus

text: Mock treated homozygous BRCA2 mutant clone 1


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: Mock treated homozygous BRCA2 mutant clone 2


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: Mock treated homozygous BRCA2 mutant clone 3


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single homozygous BRCA2 mutant DT40 cell clone isolated following a methyl methanesulfonate treatment regime

text: Gallus gallus

text: Gallus gallus

text: MMS treated homozygous BRCA2 mutant clone 1


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: MMS treated homozygous BRCA2 mutant clone 2


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: MMS treated homozygous BRCA2 mutant clone 3


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Starting clone of the heterozygous BRCA2 mutant (DT40 cell line)

text: Gallus gallus

text: Gallus gallus

text: Heterozygous BRCA2 mutant starting clone


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single heterozygous BRCA2 mutant DT40 cell clone isolated following a mock treatment regime

text: Gallus gallus

text: Gallus gallus

text: Mock treated heterozygous BRCA2 mutant clone 1


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: Mock treated heterozygous BRCA2 mutant clone 2


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: Mock treated heterozygous BRCA2 mutant clone 3


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single heterozygous BRCA2 mutant DT40 cell clone isolated following a methyl methanesulfonate treatment regime

text: Gallus gallus

text: Gallus gallus

text: MMS treated heterozygous BRCA2 mutant clone 1


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: MMS treated heterozygous BRCA2 mutant clone 2


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Starting clone of the wild type DT40 cell line

text: Gallus gallus

text: Gallus gallus

text: Wild type starting clone


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single wild type DT40 cell clone isolated following a mock treatment regime

text: Gallus gallus

text: Gallus gallus

text: Mock treated wild type clone 1


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single wild type DT40 cell clone isolated following a methyl methanesulfonate treatment regime

text: Gallus gallus

text: Gallus gallus

text: MMS treated wild type clone 1


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: Mock treated wild type clone 2


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: Mock treated wild type clone 3


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: MMS treated wild type clone 2


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: MMS treated wild type clone 3


text: MU

text: public

unit: day

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Protocols: Uniformly sized seeds were selected, surface-sterilised, and grown under control (nutrient medium without additional NaCl) and salt-treated (nutrient medium supplemented with 100 mM NaCl) conditions as described in (Shelden et al. 2013). After three days of germination, seminal roots were dissected, collected into 1.5 mL tubes, immediately snap-frozen in liquid nitrogen, and then stored at -80°C. Samples were dissected in the following steps: A 1.5 mm long section marked Zone 1 (meristematic zone) was taken from the root tip. The second section (Zone 2) was dissected from the elongation zone up to the third section, Zone 3 (maturation zone), which was excised at the point of visible root hair elongation up to 3/4 of the entire root. Total RNA was isolated from 50 mg root tissue using the Qiagen RNeasy kit following the manufacturer’s protocol. The RNA was analyzed for quality and concentration using a DeNovix DS-11 spectrophotometer (Wilmington, DE, USA) and an Agilent Technologies 2100 Bioanalyzer. Libraries were amplified through 13 cycles of PCR using Illumina guidelines. The Illumina TruSeq RNA Sample preparation kit v2 (Illumina Inc.) was used according to the manufacturer’s protocol. Poly(A) enrichment was used.

text: 0 seed germination stage

characteristic: developmental stage

text: Clipper

characteristic: genotype

text: Hordeum vulgare

text: Hordeum vulgare

text: Root meristematic zone

characteristic: organism part

text: Hordeum vulgare


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: MU

text: public

text: ArrayExpress

text: 0 seed germination stage

text: Clipper

text: Hordeum vulgare

characteristic: organism

text: Hordeum vulgare

text: Root elongation zone

text: Hordeum vulgare


characteristic: External Id

text: MU

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ArrayExpress

text: 0 seed germination stage

text: Clipper

text: Hordeum vulgare

text: Hordeum vulgare

text: Root maturation zone

text: Hordeum vulgare


text: MU

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: 0 seed germination stage

text: Sahara

text: Hordeum vulgare

text: Hordeum vulgare

text: Root meristematic zone

text: Hordeum vulgare


text: MU

text: public

text: ArrayExpress

characteristic: description

text: 0 seed germination stage

text: Sahara

text: Hordeum vulgare

text: Hordeum vulgare

text: Root elongation zone

text: Hordeum vulgare

characteristic: title


text: MU

text: public

characteristic: age

text: ArrayExpress

characteristic: broker name

text: 0 seed germination stage

text: Sahara

text: Hordeum vulgare

text: Hordeum vulgare

text: Root maturation zone

text: Hordeum vulgare


text: BANG

text: public

text: James Hutton Institute PCN collection

characteristic: bio material

text: Globodera rostochiensis pathotype Ro1

text: Solanum tuberosum

characteristic: lab host

text: Globodera rostochiensis

text: Globodera rostochiensis

characteristic: strain

text: Globodera rostochiensis Ro1


Clinical isolate1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ANIMAL AND PLANT HEALTH AGENCY

text: public

text: Clinical isolate1

tag: Namespace:ANIMAL AND PLANT HEALTH AGENCY

text: Escherichia coli

text: Escherichia coli

text: Clinical isolate


characteristic: ENA-LAST-UPDATE

text: public

tag: Namespace:Centrum Medyczne Ksztalcenia Podyplomowego

characteristic: collection date

text: intestine environment

characteristic: environment (biome)

text: organ

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Poland

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: SFP

characteristic: host diet

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: mouse gut metagenome

characteristic: organism

characteristic: project name

text: mouse gut metagenome

text: Ion Torrent PGM

characteristic: sequencing method

characteristic: time


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: Centrum Medyczne Ksztalcenia Podyplomowego

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: intestine environment

text: organ

text: feces

text: Poland

text: SFP

text: host-associated

text: metagenome

text: mouse gut metagenome

text: mouse gut metagenome

text: Ion Torrent PGM

characteristic: title


characteristic: ENA-LAST-UPDATE

text: public

characteristic: collection date

text: intestine environment

characteristic: environment (biome)

text: organ

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Poland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: HFDS

characteristic: host diet

characteristic: host subject id

text: host-associated

text: metagenome

text: mouse gut metagenome

text: mouse gut metagenome

text: Ion Torrent PGM


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

characteristic: INSDC center name

text: public

text: intestine environment

text: organ

text: feces

text: Poland

text: HFD

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: mouse gut metagenome

characteristic: organism

characteristic: project name

text: mouse gut metagenome

text: Ion Torrent PGM

characteristic: sequencing method

characteristic: time


characteristic: ENA-LAST-UPDATE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: intestine environment

characteristic: environment (biome)

text: organ

characteristic: environment (feature)

text: feces

text: Poland

text: ND

text: host-associated

text: metagenome

text: mouse gut metagenome

text: mouse gut metagenome

text: Ion Torrent PGM

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: JUSTUS LIEBIG UNIVERSITAT

characteristic: INSDC center name

text: public

tag: Namespace:JUSTUS LIEBIG UNIVERSITAT

text: Escherichia coli

text: Escherichia coli

text: Sequencing of ESBL-producing E. coli from humans in Tanzania


Isolate 12

text: UNIVERSITY OF WARWICK

text: public

text: Isolate 12

tag: Namespace:UNIVERSITY OF WARWICK

text: Enterococcus faecium

characteristic: description

text: Germany

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: Human

characteristic: host scientific name

text: Isolate 12

characteristic: isolate

text: blood culture

characteristic: isolation source

text: 50.936 N 6.952 E

characteristic: lat lon

text: Enterococcus faecium

characteristic: organism

text: Enterococcus faecium

text: Enterococcus faecium


Isolate 17

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF WARWICK

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Isolate 17

characteristic: Submitter Id

text: Enterococcus faecium

text: Germany

text: diseased

text: Human

text: Isolate 17

text: blood culture

text: 50.936 N 6.952 E

text: Enterococcus faecium

text: Enterococcus faecium

text: Enterococcus faecium


Isolate 18

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF WARWICK

text: public

text: Isolate 18

characteristic: collection date

text: Enterococcus faecium

text: Germany

text: diseased

text: Human

text: Isolate 18

text: blood culture

text: 50.936 N 6.952 E

text: Enterococcus faecium

text: Enterococcus faecium

text: Enterococcus faecium

characteristic: title


Isolate 19

characteristic: External Id

text: UNIVERSITY OF WARWICK

characteristic: INSDC center name

text: public

text: Isolate 19

text: Enterococcus faecium

characteristic: description

text: Germany

characteristic: geographic location (country and/or sea)

text: diseased

text: Human

text: Isolate 19

text: blood culture

text: 50.936 N 6.952 E

text: Enterococcus faecium

text: Enterococcus faecium

text: Enterococcus faecium


Isolate 20

text: UNIVERSITY OF WARWICK

text: public

text: Isolate 20

text: Enterococcus faecium

text: Germany

text: diseased

characteristic: host health state

text: Human

characteristic: host scientific name

text: Isolate 20

characteristic: isolate

text: blood culture

characteristic: isolation source

text: 50.936 N 6.952 E

text: Enterococcus faecium

text: Enterococcus faecium

text: Enterococcus faecium


Isolate 21

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF WARWICK

characteristic: INSDC first public

text: public

text: Isolate 21

text: Enterococcus faecium

text: Germany

text: diseased

text: Human

text: Isolate 21

text: blood culture

text: 50.936 N 6.952 E

characteristic: lat lon

text: Enterococcus faecium

characteristic: organism

text: Enterococcus faecium

text: Enterococcus faecium


Isolate 22

text: UNIVERSITY OF WARWICK

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Isolate 22

characteristic: Submitter Id

text: Enterococcus faecium

text: Germany

text: diseased

text: Human

text: Isolate 22

text: blood culture

text: 50.936 N 6.952 E

text: Enterococcus faecium

text: Enterococcus faecium

text: Enterococcus faecium


Isolate 23

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF WARWICK

text: public

text: Isolate 23

characteristic: collection date

text: Enterococcus faecium

text: Germany

text: diseased

text: Human

text: Isolate 23

text: blood culture

text: 50.936 N 6.952 E

text: Enterococcus faecium

text: Enterococcus faecium

text: Enterococcus faecium

characteristic: title


Isolate 24

characteristic: External Id

text: UNIVERSITY OF WARWICK

characteristic: INSDC center name

text: public

text: Isolate 24

text: Enterococcus faecium

characteristic: description

text: Germany

characteristic: geographic location (country and/or sea)

text: diseased

text: Human

text: Isolate 24

text: blood culture

text: 50.936 N 6.952 E

text: Enterococcus faecium

text: Enterococcus faecium

text: Enterococcus faecium


Isolate 25

text: UNIVERSITY OF WARWICK

text: public

text: Isolate 25

text: Enterococcus faecium

text: Germany

text: diseased

characteristic: host health state

text: Human

characteristic: host scientific name

text: Isolate 25

characteristic: isolate

text: blood culture

characteristic: isolation source

text: 50.936 N 6.952 E

text: Enterococcus faecium

text: Enterococcus faecium

text: Enterococcus faecium


Isolate 3

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF WARWICK

characteristic: INSDC first public

text: public

text: Isolate 3

text: Enterococcus faecium

text: Germany

text: diseased

text: Human

text: Isolate 3

text: stool

text: 50.936 N 6.952 E

characteristic: lat lon

text: Enterococcus faecium

characteristic: organism

text: Enterococcus faecium

text: Enterococcus faecium


Isolate 30

text: UNIVERSITY OF WARWICK

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Isolate 30

characteristic: Submitter Id

text: Enterococcus faecium

text: Germany

text: diseased

text: Human

text: Isolate 30

text: stool

text: 50.936 N 6.952 E

text: Enterococcus faecium

text: Enterococcus faecium

text: Enterococcus faecium


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: IP

text: public

characteristic: collection date

text: Sweden

text: Human

text: Lymph node

text: Yersinia enterocolitica

text: Yersinia enterocolitica

characteristic: serovar

characteristic: title


characteristic: External Id

text: IP

characteristic: INSDC center name

text: public

text: Cote d'Ivoire

characteristic: geographic location (country and/or sea)

text: Pig

text: Stool

text: Yersinia enterocolitica

text: Yersinia enterocolitica


text: IP

text: public

text: Cote d'Ivoire

text: Human

characteristic: host scientific name

characteristic: isolate

text: Stool

characteristic: isolation source

text: Yersinia enterocolitica

text: Yersinia enterocolitica


characteristic: ENA-LAST-UPDATE

text: TEXAS A AND M UNIVERSITY

characteristic: INSDC first public

text: public

tag: Namespace:TEXAS A AND M UNIVERSITY

text: house mouse

characteristic: common name

text: Mouse attempt 602 take 1

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: organic feature

characteristic: environment (feature)

text: organic material

characteristic: environment (material)

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: Mus musculus

characteristic: project name

text: Mus musculus

text: Illumina

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: TECHNICAL UNIVERISTY OF DENMARK

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:TECHNICAL UNIVERISTY OF DENMARK

characteristic: Submitter Id

text: FACS sorted transconjugants and FACS sorted whole community for each condition

text: Transconjugants

characteristic: facs sorted community

text: soil metagenome

characteristic: organism

text: soil metagenome

text: Sorted community

characteristic: title


characteristic: ENA-LAST-UPDATE

text: TECHNICAL UNIVERISTY OF DENMARK

characteristic: INSDC first public

text: public

characteristic: description

text: Transconjugants

characteristic: metal stressor & inhibition level

text: soil metagenome

text: soil metagenome

text: Sorted community


text: TECHNICAL UNIVERISTY OF DENMARK

text: public

text: Community

text: soil metagenome

text: soil metagenome

text: Sorted community


text: TECHNICAL UNIVERISTY OF DENMARK

text: public

text: Community

text: soil metagenome

text: soil metagenome

text: Sorted community


text: INSTITUT PASTEUR

text: public

tag: Namespace:INSTITUT PASTEUR

text: Mice infected by Listeria monocytogenes

text: mouse microbiota

characteristic: host

text: mouse gut metagenome

text: mouse gut metagenome

text: listeria metagenomic


text: INSTITUT PASTEUR

text: public

text: Mice infected by Listeria monocytogenes

text: mouse microbiota

text: mouse metagenome

text: mouse metagenome

text: listeria metagenomic


Chicken NPHS1 reads

text: ARO

text: public

text: Chicken NPHS1 reads

text: chicken

characteristic: common name

text: Reads assembled from SRX316902 (mRNA-seq of female red jungle fowl kidney)

text: Adult

characteristic: dev stage

text: Gallus gallus

text: Gallus gallus

text: female

characteristic: sex

characteristic: strain

text: Kidney

characteristic: tissue type

text: avian NPHS1 reads


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: CSIRO ANIMAL FOOD & HEALTH SCIENCES

characteristic: INSDC center name

characteristic: INSDC last update

text: public

tag: Namespace:CSIRO ANIMAL FOOD & HEALTH SCIENCES

characteristic: collection date

text: Rumen microbiome

text: Rumen sample from cattle (Brahman) fed with hay

text: anatomical entity environment

characteristic: environment (biome)

text: microbial feature

characteristic: environment (feature)

text: microbial mat material

characteristic: environment (material)

text: Australia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: metagenome

text: Energy pathway_1

characteristic: project name

text: metagenome

text: Illumina MiSeq

characteristic: sequencing method


characteristic: ENA-LAST-UPDATE

text: CSIRO ANIMAL FOOD & HEALTH SCIENCES

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Rumen microbiome

characteristic: common name

text: Rumen sample from cattle (Brahman) fed with hay and treated with chloroform

characteristic: description

text: anatomical entity environment

text: microbial feature

text: microbial mat material

text: Australia

text: host-associated

text: metagenome

text: metagenome

characteristic: organism

text: Energy pathway_1

text: metagenome

text: Illumina MiSeq

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: CSIRO ANIMAL FOOD & HEALTH SCIENCES

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: collection date

text: Rumen microbiome

text: Rumen sample from cattle (Brahman) fed with hay:concentrate (60:40)

text: anatomical entity environment

characteristic: environment (biome)

text: microbial feature

characteristic: environment (feature)

text: microbial mat material

characteristic: environment (material)

text: Australia

text: host-associated

text: metagenome

text: metagenome

text: Energy pathway_1

text: metagenome

text: Illumina MiSeq


characteristic: ENA-LAST-UPDATE

text: CSIRO ANIMAL FOOD & HEALTH SCIENCES

characteristic: INSDC first public

text: public

text: Rumen microbiome

text: Rumen sample from cattle (Brahman) fed with hay:concentrate (60:40) and treated with chloroform

text: anatomical entity environment

text: microbial feature

text: microbial mat material

text: Australia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: metagenome

text: Energy pathway_1

characteristic: project name

text: metagenome

text: Illumina MiSeq

characteristic: sequencing method


Turkey TNF mRNA

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ARO

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Turkey TNF mRNA

characteristic: Submitter Id

text: turkey

characteristic: common name

text: Adult

characteristic: dev stage

text: Meleagris gallopavo

characteristic: organism

text: Meleagris gallopavo

text: Spleen

characteristic: tissue type

text: Turkey TNF reads

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:UNIVERSITY OF COPENHAGEN

text: Ophiocordyceps bispora

text: Ophiocordyceps bispora

text: O. bispora draft genome


text: public

tag: Namespace:UPPSALA UNIVERSITY, UPPSALA, SWEDEN AND BROAD INSTITUTE, BOSTON, MA

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: CMT dog


text: UPPSALA UNIVERSITY, UPPSALA, SWEDEN AND BROAD INSTITUTE, BOSTON, MA

text: public

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: CMT dog


TREMTM

text: public

text: TREMTM

tag: Namespace:Division of Microbial Ecology Department of Microbiology and Ecosystem Science University of Vienna

text: Candidatus Tremblaya princeps

text: Candidatus Tremblaya princeps

text: Tremblaya princeps from the mealybug Trabutina mannipara


TRABTM

text: Division of Microbial Ecology Department of Microbiology and Ecosystem Science University of Vienna

text: public

text: TRABTM

text: secondary endosymbiont of Trabutina mannipara


TMANN

text: public

text: TMANN

text: Trabutina mannipara

text: Trabutina mannipara

text: Trabutina mannipara whole genome shotgun sequence


text: public

tag: Namespace:UNIVERSITY OF NORTH CAROLINA AT CHAPEL HILL

characteristic: collection date

text: lung

characteristic: environment (biome)

text: lung

characteristic: environment (feature)

text: lung

characteristic: environment (material)

text: Australia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-associated

characteristic: human associated environmental package

text: metagenome

characteristic: investigation type

text: lung metagenome

text: AusAcil

characteristic: project name

text: lung metagenome

text: Illumina MiSeq


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF NORTH CAROLINA AT CHAPEL HILL

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: lung

text: lung

text: lung

text: Australia

text: human-associated

text: metagenome

text: lung metagenome

characteristic: organism

text: AusAcil

text: lung metagenome

text: Illumina MiSeq

characteristic: sequencing method


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:SCIENCE FOR LIFE LABORATORY, KTH ROYAL INSTITUTE OF TECHNOLOGY

text: V3-V4 region, 341F-805R

characteristic: description

text: metagenome

text: metagenome

characteristic: title


text: Whole olfactory mucosa

tag: attribute

characteristic: ArrayExpress-OrganismPart

text: wildtype

characteristic: ArrayExpress-Phenotype

text: male

characteristic: ArrayExpress-Sex

text: Mus musculus

characteristic: ArrayExpress-Species

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: house mouse

characteristic: common name

text: Mus musculus

text: RNA from MOE

characteristic: sample description

text: Mus musculus

characteristic: strain


text: Whole olfactory mucosa

text: mutant

text: male

text: Mus musculus

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: house mouse

text: Mus musculus

characteristic: organism

text: RNA from MOE

text: Mus musculus


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IMPERIAL COLLEGE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:IMPERIAL COLLEGE

characteristic: collection date

text: laboratory

characteristic: environment (biome)

text: mosquito colony

characteristic: environment (feature)

text: midgut

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: Anopheles gambiae M

text: antibiotics mosquito microbiota

characteristic: project name

text: Anopheles gambiae M

text: pyrosequencing

characteristic: sequencing method

text: 16S mosquito midgut


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF DUISBURG-ESSEN

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:UNIVERSITY OF DUISBURG-ESSEN

characteristic: Submitter Id

text: New Zealand

text: Canterbury, Lake Aviemore

characteristic: geographic location (region and locality)

text: Jens Boenigk

characteristic: identified by

text: Lake water

characteristic: isolation source

text: Spumella-like flagellate JBNZ41

characteristic: organism

text: Spumella-like flagellate JBNZ41

characteristic: strain

text: Poteriospumella lacustris strain JBNZ41 mRNA

characteristic: title

text: heterotroph

characteristic: trophy


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF DUISBURG-ESSEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Tanzania

characteristic: geographic location (country and/or sea)

text: Dar es Salaam, Msimbazi River

text: Jens Boenigk

text: Lake water

text: Spumella-like flagellate JBAF33

text: Spumella-like flagellate JBAF33

text: Acrispumella msimbaziensis strain JBAF33 mRNA

text: heterotroph


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF DUISBURG-ESSEN

text: public

text: China

text: Yanqing, Badaling

text: Jens Boenigk

text: Soil

text: Spumella-like flagellate JBC/S23

text: Spumella-like flagellate JBC/S23

text: Pedospumella sinomuralis strain JBC/S23 mRNA

text: heterotroph


text: UNIVERSITY OF DUISBURG-ESSEN

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Austria

text: Lower Austria, Lunz

text: Jens Boenigk

text: Puddle

text: Spumella-like flagellate JBL14

text: Spumella-like flagellate JBL14

text: Spumella bureschii strain JBL14 mRNA

text: heterotroph


text: UNIVERSITY OF DUISBURG-ESSEN

text: public

characteristic: Submitter Id

text: New Zealand

text: Westland District, Karangarua

characteristic: geographic location (region and locality)

text: Jens Boenigk

text: Shallow tarn

text: Spumella-like flagellate JBNZ39

text: Spumella-like flagellate JBNZ39

text: Spumella lacusvadosi strain JBNZ39 mRNA

text: heterotroph


text: UNIVERSITY OF DUISBURG-ESSEN

text: public

text: China

text: Wuxi, Lake Tai Hu

text: Jens Boenigk

characteristic: identified by

text: Lake water

characteristic: isolation source

text: Spumella-like flagellate JBC07

text: Spumella-like flagellate JBC07

text: Poteriospumella lacustris strain JBC07 mRNA

text: heterotroph


text: UNIVERSITY OF DUISBURG-ESSEN

text: public

text: Austria

text: Salzkammergut, Lake Mondsee

text: Jens Boenigk

text: Lake water

text: Spumella-like flagellate JBM08

characteristic: organism

text: Spumella-like flagellate JBM08

characteristic: strain

text: Apoikiospumella mondseeiensis strain JBM08 mRNA

text: heterotroph


DS

text: UNIVERSITY OF DUISBURG-ESSEN

text: public

text: DS

text: Germany

text: Baden-Wuerttemberg, Lake Constance

text: Jens Boenigk

text: Lake water

text: Poterioochromonas sp. DS

text: Poterioochromonas sp. DS

text: DS

text: Poterioochromonas malhamensis strain DS mRNA

characteristic: title

text: mixotroph

characteristic: trophy


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF DUISBURG-ESSEN

text: public

text: Austria

text: Salzkammergut, Fuschler Ache

text: Jens Boenigk

text: Lake water

text: Spumella sp. AR4D6

text: Spumella sp. AR4D6

text: Cornospumella fuschlensis strain AR4D6 mRNA

text: heterotroph


text: UNIVERSITY OF DUISBURG-ESSEN

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Austria

text: Salzkammergut, Lake Mondsee

text: Jens Boenigk

text: Lake water

text: Poteriospumella lacustris

text: Poteriospumella lacustris

text: Poteriospumella lacustris strain JBM10 mRNA

text: heterotroph


text: UNIVERSITY OF DUISBURG-ESSEN

characteristic: INSDC last update

text: public

text: Austria

characteristic: geographic location (country and/or sea)

text: Salzkammergut, Mondsee

text: Jens Boenigk

text: Soil

text: Pedospumella encystans

text: Pedospumella encystans

text: Pedospumella encystans strain JBM/S11 mRNA

text: heterotroph


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF DUISBURG-ESSEN

text: public

text: Antarctica

text: Queen Elizabeth Land, Davis Valley pond

text: Jens Boenigk

text: Pond water

text: Spumella vulgaris

text: Spumella vulgaris

text: Spumella vulgaris strain 199hm mRNA

text: heterotroph


text: UNIVERSITY OF DUISBURG-ESSEN

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Austria

text: Burgenland, Loipersbacher Teich

text: Jens Boenigk

text: Pond water

text: Ochromonas sp. LO244K-D

text: Ochromonas sp. LO244K-D

text: Ochromonas spec. strain LO244K-D mRNA

text: heterotroph


text: UNIVERSITY OF DUISBURG-ESSEN

text: public

characteristic: Submitter Id

text: Austria

text: Salzkammergut, Lake Fuschl

characteristic: geographic location (region and locality)

text: Jens Boenigk

text: Lake water

text: Dinobryon sp. FU22KAK

text: Dinobryon sp. FU22KAK

text: Dinobryon spec. strain FU22KAK mRNA

text: mixotroph


text: UNIVERSITY OF DUISBURG-ESSEN

text: public

text: Austria

text: Burgenland, Loipersbacher Teich

text: Jens Boenigk

characteristic: identified by

text: Lake water

characteristic: isolation source

text: Dinobryon sp. LO226KS

text: Dinobryon sp. LO226KS

text: Dinobryon spec. strain LO226KS mRNA

text: mixotroph


text: UNIVERSITY OF DUISBURG-ESSEN

text: public

text: Austria

text: Burgenland, Loipersbacher Teich

text: Jens Boenigk

text: Lake water

text: Synura sp. LO234KE

characteristic: organism

text: Synura sp. LO234KE

characteristic: strain

text: Synura spec. strain LO234KE mRNA

text: phototroph


text: UNIVERSITY OF DUISBURG-ESSEN

text: public

text: Austria

text: Salzburg, Lake Prebersee

text: Jens Boenigk

text: Lake water

text: Epipyxis sp. PR26KG

text: Epipyxis sp. PR26KG

text: Epipyxis spec. strain PR26KG mRNA

characteristic: title

text: mixotroph

characteristic: trophy


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF DUISBURG-ESSEN

text: public

text: Austria

text: Salzburg, Lake Wallersee

text: Jens Boenigk

text: Lake water

text: Uroglena sp. WA34KE

text: Uroglena sp. WA34KE

text: Uroglena spec. strain WA34KE

text: mixotroph


text: department of environmental sciences

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:department of environmental sciences

text: Arabidopsis lyrata subsp. lyrata

text: Arabidopsis lyrata subsp. lyrata

text: leaf

characteristic: tissue type

text: Arabidopsis transcriptome


characteristic: ENA-CHECKLIST

text: department of environmental sciences

characteristic: INSDC last update

text: public

text: Arabidopsis lyrata subsp. lyrata

text: Arabidopsis lyrata subsp. lyrata

text: leaf

text: arabidopsis lyrata transcriptome


text: Neisseria meningitidis

characteristic: ArrayExpress-Species

text: MC58 spr:LacZ

characteristic: ArrayExpress-StrainOrLine

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

characteristic: INSDC status

text: Neisseria meningitidis

characteristic: common name

text: Neisseria meningitidis

text: Boilate of MC58 spr:LacZ

characteristic: sample description

text: Neisseria meningitidis

text: MC58 spr:LacZ


text: Neisseria meningitidis

text: MC58 ?siaD ?mutS PorA-ve

text: SC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Neisseria meningitidis

text: Neisseria meningitidis

characteristic: organism

text: Boilate of MC58 ?siaD ?mutS PorA-ve

text: Neisseria meningitidis

text: MC58 ?siaD ?mutS PorA-ve


text: Mus musculus

text: SC

text: public

text: house mouse

text: Mus musculus

text: Vehicle control

text: Mus musculus

characteristic: title


text: Mus musculus

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: house mouse

text: Mus musculus

text: Amoxicillin

text: Mus musculus


text: Mus musculus

characteristic: External Id

text: SC

text: public

text: house mouse

text: Mus musculus

text: Cefalexin

text: Mus musculus


text: Mus musculus

text: SC

characteristic: INSDC center name

text: public

text: house mouse

text: Mus musculus

text: Ciprofloxacin

text: Mus musculus


text: Mus musculus

text: SC

characteristic: INSDC first public

text: public

text: house mouse

text: Mus musculus

text: Clarithromycin

text: Mus musculus


text: Mus musculus

text: SC

text: public

text: house mouse

text: Mus musculus

text: Doxycycline

text: Mus musculus


text: Mus musculus

text: SC

text: public

text: house mouse

text: Mus musculus

text: Metronidazole

text: Mus musculus


text: Mus musculus

text: SC

text: public

text: house mouse

text: Mus musculus

text: Vancomycin

text: Mus musculus


text: Mus musculus

text: SC

text: public

text: house mouse

text: Mus musculus

text: Kanamycin Low

text: Mus musculus


text: mus musculus

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

characteristic: strain


text: male

characteristic: ArrayExpress-Sex

text: Mus musculus

characteristic: ENA-CHECKLIST

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus


text: UNIVERSITY OF OXFORD

characteristic: INSDC last update

text: public

tag: Namespace:UNIVERSITY OF OXFORD

text: amphioxus

text: Branchiostoma lanceolatum

text: Branchiostoma lanceolatum

text: Whole adult


text: CGR

text: public

text: metagenome

text: metagenome

text: Sample


text: Univ of Florida/Whitney Laboratory

text: public

tag: Namespace:Univ of Florida/Whitney Laboratory

text: starlet sea anemone

text: Nematostella vectensis

text: Nematostella vectensis

text: nematosomes

characteristic: tissue type

text: Nematostella vectensis transcriptome


characteristic: ENA-FIRST-PUBLIC

text: Univ of Florida/Whitney Laboratory

text: public

text: starlet sea anemone

text: Nematostella vectensis

text: Nematostella vectensis

text: mesenteries

text: Nematostella vectensis transcriptome


text: Univ of Florida/Whitney Laboratory

text: public

characteristic: INSDC status

text: starlet sea anemone

text: Nematostella vectensis

text: Nematostella vectensis

text: tentacles

text: Nematostella vectensis transcriptome


text: public

tag: Namespace:Max Planck Institute for the Science of Human History

text: Tooth sample that was positive for Y. pestis (3031) from the Black Death site in Barcelona

characteristic: description

text: Yersinia pestis

text: Yersinia pestis


text: Max Planck Institute for the Science of Human History

text: public

text: Y. pestis positive tooth sample of individual 2370 from the Ust’-Ierusalimsky tombs of Bolgar City

text: Yersinia pestis

text: Yersinia pestis


text: public

text: Yersinia pestis

text: Yersinia pestis


text: public

text: Tooth sample (molar) from individual 549_O, found positive for Y. pestis

text: Yersinia pestis

text: Yersinia pestis


text: KAUST

text: public

text: Burkholderia cenocepacia J2315

text: Burkholderia cenocepacia J2315


text: KAUST

text: public

text: Burkholderia pseudomallei

text: Burkholderia pseudomallei


text: UCSDMI

text: public

characteristic: age

text: years

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: false

characteristic: antibiotics

text: False

text: stool

characteristic: biopsy location

text: restricted access

characteristic: birthdate

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: OSCCAR

characteristic: collection

text: 1/1/59 0:00

text: human gut metagenome

characteristic: common name

text: GAZ:United States of America

characteristic: country

characteristic: depth

text: OR100001 stool

text: CD

characteristic: diagnosis

text: CD

characteristic: diseasesubtype

text: True

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: feces

characteristic: env matter

text: human-gut

characteristic: env package

text: CD

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

text: false

text: false

characteristic: immunosup

characteristic: latitude

characteristic: longitude

text: true

characteristic: mesalamine

text: human gut metagenome

characteristic: orig name

text: BI

text: False

text: True

characteristic: public

text: completed

text: stool

characteristic: sample type

text: human gut metagenome

text: male

characteristic: sex

text: Never

characteristic: smoking

text: false

characteristic: steroids

text: stool


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: years

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: false

characteristic: antibiotics

text: False

text: stool

characteristic: biopsy location

text: restricted access

characteristic: birthdate

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: OSCCAR

characteristic: collection

text: 1/1/59 0:00

text: human gut metagenome

characteristic: common name

text: GAZ:United States of America

characteristic: country

characteristic: depth

text: OR100003 stool

characteristic: description

text: CD

characteristic: diagnosis

text: CD

characteristic: diseasesubtype

text: True

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: feces

text: human-gut

text: CD

text: human

text: Homo sapiens

text: false

text: false

text: true

text: human gut metagenome

characteristic: organism

text: BI

text: False

text: True

text: completed

text: stool

text: human gut metagenome

text: male

text: Current

text: true

characteristic: title

text: stool


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: years

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: false

characteristic: antibiotics

text: False

text: stool

characteristic: biopsy location

text: restricted access

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: OSCCAR

text: 1/1/59 0:00

text: human gut metagenome

text: GAZ:United States of America

text: OR100009 stool

text: UC

text: UC

text: True

text: urban biome

text: human-associated habitat

text: feces

characteristic: env matter

text: human-gut

characteristic: env package

text: UC

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

text: false

text: false

characteristic: immunosup

characteristic: latitude

characteristic: longitude

text: true

characteristic: mesalamine

text: human gut metagenome

characteristic: orig name

text: BI

text: False

text: True

characteristic: public

text: completed

text: stool

characteristic: sample type

text: human gut metagenome

text: male

characteristic: sex

text: Never

characteristic: smoking

text: false

characteristic: steroids

text: stool


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: years

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: false

characteristic: antibiotics

text: False

text: stool

characteristic: biopsy location

text: restricted access

characteristic: birthdate

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: OSCCAR

characteristic: collection

text: 1/1/59 0:00

text: human gut metagenome

characteristic: common name

text: GAZ:United States of America

characteristic: country

characteristic: depth

text: OR100015 stool

characteristic: description

text: CD

characteristic: diagnosis

text: CD

characteristic: diseasesubtype

text: True

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: feces

text: human-gut

text: CD

text: human

text: Homo sapiens

text: false

text: false

text: false

text: human gut metagenome

characteristic: organism

text: BI

text: False

text: True

text: completed

text: stool

text: human gut metagenome

text: female

text: Current

text: false

characteristic: title

text: stool


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: years

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: false

characteristic: antibiotics

text: False

text: stool

characteristic: biopsy location

text: restricted access

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: OSCCAR

text: 1/1/59 0:00

text: human gut metagenome

text: GAZ:United States of America

text: OR100016 stool

text: IC

text: IC

text: True

text: urban biome

text: human-associated habitat

text: feces

characteristic: env matter

text: human-gut

characteristic: env package

text: IC

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

text: false

text: false

characteristic: immunosup

characteristic: latitude

characteristic: longitude

text: false

characteristic: mesalamine

text: human gut metagenome

characteristic: orig name

text: BI

text: False

text: True

characteristic: public

text: completed

text: stool

characteristic: sample type

text: human gut metagenome

text: male

characteristic: sex

text: Never

characteristic: smoking

text: true

characteristic: steroids

text: stool


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: years

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: false

characteristic: antibiotics

text: False

text: stool

characteristic: biopsy location

text: restricted access

characteristic: birthdate

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: OSCCAR

characteristic: collection

text: 1/1/59 0:00

text: human gut metagenome

characteristic: common name

text: GAZ:United States of America

characteristic: country

characteristic: depth

text: OR100043 stool

characteristic: description

text: IC

characteristic: diagnosis

text: IC

characteristic: diseasesubtype

text: True

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: feces

text: human-gut

text: IC

text: human

text: Homo sapiens

text: false

text: false

text: true

text: human gut metagenome

characteristic: organism

text: BI

text: False

text: True

text: completed

text: stool

text: human gut metagenome

text: male

text: Never

text: false

characteristic: title

text: stool


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: years

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: false

characteristic: antibiotics

text: False

text: stool

characteristic: biopsy location

text: restricted access

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: OSCCAR

text: 1/1/59 0:00

text: human gut metagenome

text: GAZ:United States of America

text: OR100046 stool

text: CD

text: CD

text: True

text: urban biome

text: human-associated habitat

text: feces

characteristic: env matter

text: human-gut

characteristic: env package

text: CD

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

text: false

text: false

characteristic: immunosup

characteristic: latitude

characteristic: longitude

text: true

characteristic: mesalamine

text: human gut metagenome

characteristic: orig name

text: BI

text: False

text: True

characteristic: public

text: completed

text: stool

characteristic: sample type

text: human gut metagenome

text: male

characteristic: sex

text: Current

characteristic: smoking

text: false

characteristic: steroids

text: stool


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: years

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: true

characteristic: antibiotics

text: False

text: stool

characteristic: biopsy location

text: restricted access

characteristic: birthdate

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: OSCCAR

characteristic: collection

text: 1/1/59 0:00

text: human gut metagenome

characteristic: common name

text: GAZ:United States of America

characteristic: country

characteristic: depth

text: OR100047 stool

characteristic: description

text: UC

characteristic: diagnosis

text: UC

characteristic: diseasesubtype

text: True

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: feces

text: human-gut

text: UC

text: human

text: Homo sapiens

text: false

text: false

text: true

text: human gut metagenome

characteristic: organism

text: BI

text: False

text: True

text: completed

text: stool

text: human gut metagenome

text: male

text: Never

text: true

characteristic: title

text: stool


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: years

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: false

characteristic: antibiotics

text: False

text: stool

characteristic: biopsy location

text: restricted access

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: OSCCAR

text: 1/1/59 0:00

text: human gut metagenome

text: GAZ:United States of America

text: OR100048 stool

text: UC

text: UC

text: True

text: urban biome

text: human-associated habitat

text: feces

characteristic: env matter

text: human-gut

characteristic: env package

text: UC

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

text: false

text: false

characteristic: immunosup

characteristic: latitude

characteristic: longitude

text: true

characteristic: mesalamine

text: human gut metagenome

characteristic: orig name

text: BI

text: False

text: True

characteristic: public

text: completed

text: stool

characteristic: sample type

text: human gut metagenome

text: female

characteristic: sex

text: Current

characteristic: smoking

text: false

characteristic: steroids

text: stool


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: years

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: false

characteristic: antibiotics

text: False

text: stool

characteristic: biopsy location

text: restricted access

characteristic: birthdate

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: OSCCAR

characteristic: collection

text: 1/1/59 0:00

text: human gut metagenome

characteristic: common name

text: GAZ:United States of America

characteristic: country

characteristic: depth

text: OR100049 stool

characteristic: description

text: UC

characteristic: diagnosis

text: UC

characteristic: diseasesubtype

text: True

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: feces

text: human-gut

text: UC

text: human

text: Homo sapiens

text: false

text: false

text: true

text: human gut metagenome

characteristic: organism

text: BI

text: False

text: True

text: completed

text: stool

text: human gut metagenome

text: female

text: Current

text: false

characteristic: title

text: stool


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: years

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: false

characteristic: antibiotics

text: False

text: stool

characteristic: biopsy location

text: restricted access

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: OSCCAR

text: 1/1/59 0:00

text: human gut metagenome

text: GAZ:United States of America

text: OR100051 stool

text: UC

text: UC

text: True

text: urban biome

text: human-associated habitat

text: feces

characteristic: env matter

text: human-gut

characteristic: env package

text: UC

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

text: false

text: false

characteristic: immunosup

characteristic: latitude

characteristic: longitude

text: true

characteristic: mesalamine

text: human gut metagenome

characteristic: orig name

text: BI

text: False

text: True

characteristic: public

text: completed

text: stool

characteristic: sample type

text: human gut metagenome

text: female

characteristic: sex

text: Never

characteristic: smoking

text: false

characteristic: steroids

text: stool


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: years

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: true

characteristic: antibiotics

text: False

text: stool

characteristic: biopsy location

text: restricted access

characteristic: birthdate

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: OSCCAR

characteristic: collection

text: 1/1/59 0:00

text: human gut metagenome

characteristic: common name

text: GAZ:United States of America

characteristic: country

characteristic: depth

text: OR100052 stool

characteristic: description

text: CD

characteristic: diagnosis

text: CD

characteristic: diseasesubtype

text: True

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: feces

text: human-gut

text: CD

text: human

text: Homo sapiens

text: false

text: false

text: true

text: human gut metagenome

characteristic: organism

text: BI

text: False

text: True

text: completed

text: stool

text: human gut metagenome

text: male

text: Never

text: true

characteristic: title

text: stool


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: years

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: false

characteristic: antibiotics

text: False

text: stool

characteristic: biopsy location

text: restricted access

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: OSCCAR

text: 1/1/59 0:00

text: human gut metagenome

text: GAZ:United States of America

text: OR100058 stool

text: CD

text: CD

text: True

text: urban biome

text: human-associated habitat

text: feces

characteristic: env matter

text: human-gut

characteristic: env package

text: CD

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

text: false

text: false

characteristic: immunosup

characteristic: latitude

characteristic: longitude

text: true

characteristic: mesalamine

text: human gut metagenome

characteristic: orig name

text: BI

text: False

text: True

characteristic: public

text: completed

text: stool

characteristic: sample type

text: human gut metagenome

text: male

characteristic: sex

text: Never

characteristic: smoking

text: true

characteristic: steroids

text: stool


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: years

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: false

characteristic: antibiotics

text: False

text: stool

characteristic: biopsy location

text: restricted access

characteristic: birthdate

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: OSCCAR

characteristic: collection

text: 1/1/59 0:00

text: human gut metagenome

characteristic: common name

text: GAZ:United States of America

characteristic: country

characteristic: depth

text: OR100060 stool

characteristic: description

text: CD

characteristic: diagnosis

text: CD

characteristic: diseasesubtype

text: True

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: feces

text: human-gut

text: CD

text: human

text: Homo sapiens

text: false

text: false

text: true

text: human gut metagenome

characteristic: organism

text: BI

text: False

text: True

text: completed

text: stool

text: human gut metagenome

text: male

text: false

characteristic: title

text: stool


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: years

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: false

characteristic: antibiotics

text: False

text: stool

characteristic: biopsy location

text: restricted access

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: OSCCAR

text: 1/1/59 0:00

text: human gut metagenome

text: GAZ:United States of America

text: OR100062 stool

text: IC

text: IC

text: True

text: urban biome

text: human-associated habitat

text: feces

characteristic: env matter

text: human-gut

characteristic: env package

text: IC

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

text: false

text: false

characteristic: immunosup

characteristic: latitude

characteristic: longitude

text: true

characteristic: mesalamine

text: human gut metagenome

characteristic: orig name

text: BI

text: False

text: True

characteristic: public

text: completed

text: stool

characteristic: sample type

text: human gut metagenome

text: male

characteristic: sex

text: Never

characteristic: smoking

text: false

characteristic: steroids

text: stool


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: years

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: true

characteristic: antibiotics

text: False

text: stool

characteristic: biopsy location

text: restricted access

characteristic: birthdate

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: OSCCAR

characteristic: collection

text: 1/1/59 0:00

text: human gut metagenome

characteristic: common name

text: GAZ:United States of America

characteristic: country

characteristic: depth

text: OR100065 stool

characteristic: description

text: CD

characteristic: diagnosis

text: CD

characteristic: diseasesubtype

text: True

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: feces

text: human-gut

text: CD

text: human

text: Homo sapiens

text: false

text: false

text: true

text: human gut metagenome

characteristic: organism

text: BI

text: False

text: True

text: completed

text: stool

text: human gut metagenome

text: female

text: Never

text: true

characteristic: title

text: stool


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: years

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: false

characteristic: antibiotics

text: False

text: stool

characteristic: biopsy location

text: restricted access

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: OSCCAR

text: 1/1/59 0:00

text: human gut metagenome

text: GAZ:United States of America

text: OR100068 stool

text: IC

text: IC

text: True

text: urban biome

text: human-associated habitat

text: feces

characteristic: env matter

text: human-gut

characteristic: env package

text: IC

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

text: false

text: false

characteristic: immunosup

characteristic: latitude

characteristic: longitude

text: true

characteristic: mesalamine

text: human gut metagenome

characteristic: orig name

text: BI

text: False

text: True

characteristic: public

text: completed

text: stool

characteristic: sample type

text: human gut metagenome

text: male

characteristic: sex

text: Current

characteristic: smoking

text: true

characteristic: steroids

text: stool


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: years

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: false

characteristic: antibiotics

text: False

text: stool

characteristic: biopsy location

text: restricted access

characteristic: birthdate

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: OSCCAR

characteristic: collection

text: 1/1/59 0:00

text: human gut metagenome

characteristic: common name

text: GAZ:United States of America

characteristic: country

characteristic: depth

text: OR100070 stool

characteristic: description

text: UC

characteristic: diagnosis

text: UC

characteristic: diseasesubtype

text: True

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: feces

text: human-gut

text: UC

text: human

text: Homo sapiens

text: false

text: false

text: true

text: human gut metagenome

characteristic: organism

text: BI

text: False

text: True

text: completed

text: stool

text: human gut metagenome

text: female

text: Never

text: false

characteristic: title

text: stool


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: years

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: false

characteristic: antibiotics

text: False

text: stool

characteristic: biopsy location

text: restricted access

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: OSCCAR

text: 1/1/59 0:00

text: human gut metagenome

text: GAZ:United States of America

text: OR100071 stool

text: UC

text: UC

text: True

text: urban biome

text: human-associated habitat

text: feces

characteristic: env matter

text: human-gut

characteristic: env package

text: UC

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

text: false

text: false

characteristic: immunosup

characteristic: latitude

characteristic: longitude

text: true

characteristic: mesalamine

text: human gut metagenome

characteristic: orig name

text: BI

text: False

text: True

characteristic: public

text: completed

text: stool

characteristic: sample type

text: human gut metagenome

text: female

characteristic: sex

text: Never

characteristic: smoking

text: false

characteristic: steroids

text: stool


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: years

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: false

characteristic: antibiotics

text: False

text: stool

characteristic: biopsy location

text: restricted access

characteristic: birthdate

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: OSCCAR

characteristic: collection

text: 1/1/59 0:00

text: human gut metagenome

characteristic: common name

text: GAZ:United States of America

characteristic: country

characteristic: depth

text: OR100072 stool

characteristic: description

text: CD

characteristic: diagnosis

text: CD

characteristic: diseasesubtype

text: True

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: feces

text: human-gut

text: CD

text: human

text: Homo sapiens

text: false

text: false

text: true

text: human gut metagenome

characteristic: organism

text: BI

text: False

text: True

text: completed

text: stool

text: human gut metagenome

text: female

text: Never

text: true

characteristic: title

text: stool


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: years

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: true

characteristic: antibiotics

text: False

text: stool

characteristic: biopsy location

text: restricted access

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: OSCCAR

text: 1/1/59 0:00

text: human gut metagenome

text: GAZ:United States of America

text: OR100074 stool

text: CD

text: CD

text: True

text: urban biome

text: human-associated habitat

text: feces

characteristic: env matter

text: human-gut

characteristic: env package

text: CD

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

text: false

text: false

characteristic: immunosup

characteristic: latitude

characteristic: longitude

text: false

characteristic: mesalamine

text: human gut metagenome

characteristic: orig name

text: BI

text: False

text: True

characteristic: public

text: completed

text: stool

characteristic: sample type

text: human gut metagenome

text: female

characteristic: sex

characteristic: smoking

text: false

characteristic: steroids

text: stool


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: years

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: true

characteristic: antibiotics

text: False

text: stool

characteristic: biopsy location

text: restricted access

characteristic: birthdate

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: OSCCAR

characteristic: collection

text: 1/1/59 0:00

text: human gut metagenome

characteristic: common name

text: GAZ:United States of America

characteristic: country

characteristic: depth

text: OR100075 stool

characteristic: description

text: CD

characteristic: diagnosis

text: CD

characteristic: diseasesubtype

text: True

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: feces

text: human-gut

text: CD

text: human

text: Homo sapiens

text: false

text: true

text: false

text: human gut metagenome

characteristic: organism

text: BI

text: False

text: True

text: completed

text: stool

text: human gut metagenome

text: female

text: Never

text: false

characteristic: title

text: stool


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: years

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: false

characteristic: antibiotics

text: False

text: stool

characteristic: biopsy location

text: restricted access

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: OSCCAR

text: 1/1/59 0:00

text: human gut metagenome

text: GAZ:United States of America

text: OR100077 stool

text: CD

text: CD

text: True

text: urban biome

text: human-associated habitat

text: feces

characteristic: env matter

text: human-gut

characteristic: env package

text: CD

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

text: false

text: false

characteristic: immunosup

characteristic: latitude

characteristic: longitude

text: true

characteristic: mesalamine

text: human gut metagenome

characteristic: orig name

text: BI

text: False

text: True

characteristic: public

text: completed

text: stool

characteristic: sample type

text: human gut metagenome

text: male

characteristic: sex

text: Never

characteristic: smoking

text: false

characteristic: steroids

text: stool


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: years

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: false

characteristic: antibiotics

text: False

text: stool

characteristic: biopsy location

text: restricted access

characteristic: birthdate

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: OSCCAR

characteristic: collection

text: 1/1/59 0:00

text: human gut metagenome

characteristic: common name

text: GAZ:United States of America

characteristic: country

characteristic: depth

text: OR100078 stool

characteristic: description

text: IC

characteristic: diagnosis

text: IC

characteristic: diseasesubtype

text: True

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: feces

text: human-gut

text: IC

text: human

text: Homo sapiens

text: false

text: false

text: false

text: human gut metagenome

characteristic: organism

text: BI

text: False

text: True

text: completed

text: stool

text: human gut metagenome

text: female

text: Never

text: true

characteristic: title

text: stool


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: years

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: false

characteristic: antibiotics

text: False

text: stool

characteristic: biopsy location

text: restricted access

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: OSCCAR

text: 1/1/59 0:00

text: human gut metagenome

text: GAZ:United States of America

text: OR100080 stool

text: UC

text: UC

text: True

text: urban biome

text: human-associated habitat

text: feces

characteristic: env matter

text: human-gut

characteristic: env package

text: UC

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

text: false

text: false

characteristic: immunosup

characteristic: latitude

characteristic: longitude

text: true

characteristic: mesalamine

text: human gut metagenome

characteristic: orig name

text: BI

text: False

text: True

characteristic: public

text: completed

text: stool

characteristic: sample type

text: human gut metagenome

text: male

characteristic: sex

text: Never

characteristic: smoking

text: false

characteristic: steroids

text: stool


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: years

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: false

characteristic: antibiotics

text: False

text: stool

characteristic: biopsy location

text: restricted access

characteristic: birthdate

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: OSCCAR

characteristic: collection

text: 1/1/59 0:00

text: human gut metagenome

characteristic: common name

text: GAZ:United States of America

characteristic: country

characteristic: depth

text: OR100083 stool

characteristic: description

text: CD

characteristic: diagnosis

text: CD

characteristic: diseasesubtype

text: True

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: feces

text: human-gut

text: CD

text: human

text: Homo sapiens

text: false

text: false

text: true

text: human gut metagenome

characteristic: organism

text: BI

text: False

text: True

text: completed

text: stool

text: human gut metagenome

text: male

text: Never

text: true

characteristic: title

text: stool


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: years

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: false

characteristic: antibiotics

text: False

text: stool

characteristic: biopsy location

text: restricted access

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: OSCCAR

text: 1/1/59 0:00

text: human gut metagenome

text: GAZ:United States of America

text: OR100085 stool

text: CD

text: CD

text: True

text: urban biome

text: human-associated habitat

text: feces

characteristic: env matter

text: human-gut

characteristic: env package

text: CD

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

text: false

text: false

characteristic: immunosup

characteristic: latitude

characteristic: longitude

text: true

characteristic: mesalamine

text: human gut metagenome

characteristic: orig name

text: BI

text: False

text: True

characteristic: public

text: completed

text: stool

characteristic: sample type

text: human gut metagenome

text: male

characteristic: sex

text: Current

characteristic: smoking

text: true

characteristic: steroids

text: stool


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: years

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: false

characteristic: antibiotics

text: False

text: stool

characteristic: biopsy location

text: restricted access

characteristic: birthdate

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: OSCCAR

characteristic: collection

text: 1/1/59 0:00

text: human gut metagenome

characteristic: common name

text: GAZ:United States of America

characteristic: country

characteristic: depth

text: OR100086 stool

characteristic: description

text: UC

characteristic: diagnosis

text: UC

characteristic: diseasesubtype

text: True

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: feces

text: human-gut

text: UC

text: human

text: Homo sapiens

text: false

text: false

text: true

text: human gut metagenome

characteristic: organism

text: BI

text: False

text: True

text: completed

text: stool

text: human gut metagenome

text: male

text: Current

text: true

characteristic: title

text: stool


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: years

characteristic: age unit

characteristic: altitude

characteristic: anonymized name

text: true

characteristic: antibiotics

text: False

text: stool

characteristic: biopsy location

text: restricted access

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: OSCCAR

text: 1/1/59 0:00

text: human gut metagenome

text: GAZ:United States of America

text: OR100087 stool

text: CD

text: CD

text: True

text: urban biome

text: human-associated habitat

text: feces

characteristic: env matter

text: human-gut

characteristic: env package

text: CD

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

text: false

text: false

characteristic: immunosup

characteristic: latitude

characteristic: longitude

text: true

characteristic: mesalamine

text: human gut metagenome

characteristic: orig name

text: BI

text: False

text: True

characteristic: public

text: completed

text: stool

characteristic: sample type

text: human gut metagenome

text: male

characteristic: sex

text: Never

characteristic: smoking

text: false

characteristic: steroids

text: stool