characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: AAC

text: public

text: rumen

text: Rumen sample

text: temperate grassland biome

text: organism-associated habitat

text: rumen content

text: Ft. Macleod, AB

text: Canada Macleod AB

text: 950 m

characteristic: geographic location (longitude)

text: elk

characteristic: host common name

text: AWAN 3S

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: mature

characteristic: life stage

text: AAGGTTGG

characteristic: multiplex identifiers

text: see PMID:21774582

characteristic: nucleic acid extraction

text: gut metagenome

characteristic: organism

text: Wild Diversity-PRJEB4222

characteristic: project name

text: see PMID:21774582

characteristic: sample material processing

characteristic: sample storage temperature

text: gut metagenome

text: 454 FLEX Titanium

characteristic: sequencing method

text: SSU rRNA

characteristic: target subfragment

text: Rumen sample from wild ungalates


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

text: AAC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: rumen

characteristic: body site

characteristic: collection date

text: Rumen sample

characteristic: description

text: temperate grassland biome

characteristic: environment (biome)

text: organism-associated habitat

characteristic: environment (feature)

text: rumen content

characteristic: environment (material)

text: Ft. Macleod, AB

text: Canada Macleod AB

text: 950 m

unit: m

characteristic: geographic location (elevation)

unit: DD

characteristic: geographic location (latitude)

text: elk

text: AWAN 3S

text: host-associated

text: mimarks-survey

text: mature

text: AATACCGC

text: see PMID:21774582

text: gut metagenome

text: Wild Diversity-PRJEB4222

text: see PMID:21774582

unit: ºC

text: gut metagenome

text: 454 FLEX Titanium

text: SSU rRNA

characteristic: target gene

text: Rumen sample from wild ungalates

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: AAC

text: public

text: rumen

text: Rumen sample

text: temperate grassland biome

text: organism-associated habitat

text: rumen content

text: Ft. Macleod, AB

text: Canada Macleod AB

text: 950 m

characteristic: geographic location (longitude)

text: elk

characteristic: host common name

text: ARAN 728T

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: mature

characteristic: life stage

text: AATACGCC

characteristic: multiplex identifiers

text: see PMID:21774582

characteristic: nucleic acid extraction

text: gut metagenome

characteristic: organism

text: Wild Diversity-PRJEB4222

characteristic: project name

text: see PMID:21774582

characteristic: sample material processing

characteristic: sample storage temperature

text: gut metagenome

text: 454 FLEX Titanium

characteristic: sequencing method

text: SSU rRNA

characteristic: target subfragment

text: Rumen sample from wild ungalates


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

text: AAC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: rumen

characteristic: body site

characteristic: collection date

text: Rumen sample

characteristic: description

text: temperate grassland biome

characteristic: environment (biome)

text: organism-associated habitat

characteristic: environment (feature)

text: rumen content

characteristic: environment (material)

text: Ft. Macleod, AB

text: Canada Macleod AB

text: 950 m

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

text: elk

text: ARAN 728T

text: host-associated

text: mimarks-survey

text: mature

text: AATAGCGG

text: see PMID:21774582

text: gut metagenome

text: Wild Diversity-PRJEB4222

text: see PMID:21774582

text: gut metagenome

text: 454 FLEX Titanium

text: SSU rRNA

characteristic: target gene

text: Rumen sample from wild ungalates

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: AAC

text: public

text: rumen

text: Rumen sample

text: temperate grassland biome

text: organism-associated habitat

text: rumen content

text: Ft. Macleod, AB

text: Canada Macleod AB

text: 950 m

characteristic: geographic location (longitude)

text: elk

characteristic: host common name

text: ARAN 15D

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: mature

characteristic: life stage

text: AATAGGCG

characteristic: multiplex identifiers

text: see PMID:21774582

characteristic: nucleic acid extraction

text: gut metagenome

characteristic: organism

text: Wild Diversity-PRJEB4222

characteristic: project name

text: see PMID:21774582

characteristic: sample material processing

characteristic: sample storage temperature

text: gut metagenome

text: 454 FLEX Titanium

characteristic: sequencing method

text: SSU rRNA

characteristic: target subfragment

text: Rumen sample from wild ungalates


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

text: AAC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: rumen

characteristic: body site

characteristic: collection date

text: Rumen sample

characteristic: description

text: temperate grassland biome

characteristic: environment (biome)

text: organism-associated habitat

characteristic: environment (feature)

text: rumen content

characteristic: environment (material)

text: Ft. Macleod, AB

text: Canada Macleod AB

text: 950 m

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

text: elk

text: ARAN 15D

text: host-associated

text: mimarks-survey

text: mature

text: AATTCCGG

text: see PMID:21774582

text: gut metagenome

text: Wild Diversity-PRJEB4222

text: see PMID:21774582

text: gut metagenome

text: 454 FLEX Titanium

text: SSU rRNA

characteristic: target gene

text: Rumen sample from wild ungalates

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: AAC

text: public

text: rumen

text: Rumen sample

text: temperate grassland biome

text: organism-associated habitat

text: rumen content

text: Ft. Macleod, AB

text: Canada Macleod AB

text: 950 m

characteristic: geographic location (longitude)

text: elk

characteristic: host common name

text: ARAN 21S

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: mature

characteristic: life stage

text: AATTCGCG

characteristic: multiplex identifiers

text: see PMID:21774582

characteristic: nucleic acid extraction

text: gut metagenome

characteristic: organism

text: Wild Diversity-PRJEB4222

characteristic: project name

text: see PMID:21774582

characteristic: sample material processing

characteristic: sample storage temperature

text: gut metagenome

text: 454 FLEX Titanium

characteristic: sequencing method

text: SSU rRNA

characteristic: target subfragment

text: Rumen sample from wild ungalates


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

text: AAC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: rumen

characteristic: body site

characteristic: collection date

text: Rumen sample

characteristic: description

text: temperate grassland biome

characteristic: environment (biome)

text: organism-associated habitat

characteristic: environment (feature)

text: rumen content

characteristic: environment (material)

text: Ft. Macleod, AB

text: Canada Macleod AB

text: 950 m

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

text: elk

text: ARAN 21S

text: host-associated

text: mimarks-survey

text: mature

text: AATTCGGC

text: see PMID:21774582

text: gut metagenome

text: Wild Diversity-PRJEB4222

text: see PMID:21774582

text: gut metagenome

text: 454 FLEX Titanium

text: SSU rRNA

characteristic: target gene

text: Rumen sample from wild ungalates

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: AAC

text: public

text: rumen

text: Rumen sample

text: temperate grassland biome

text: organism-associated habitat

text: rumen content

text: Ft. Macleod, AB

text: Canada Macleod AB

text: 950 m

characteristic: geographic location (longitude)

text: elk

characteristic: host common name

text: ARAN 9R

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: mature

characteristic: life stage

text: AATTGCCG

characteristic: multiplex identifiers

text: see PMID:21774582

characteristic: nucleic acid extraction

text: gut metagenome

characteristic: organism

text: Wild Diversity-PRJEB4222

characteristic: project name

text: see PMID:21774582

characteristic: sample material processing

characteristic: sample storage temperature

text: gut metagenome

text: 454 FLEX Titanium

characteristic: sequencing method

text: SSU rRNA

characteristic: target subfragment

text: Rumen sample from wild ungalates


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

text: AAC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: rumen

characteristic: body site

characteristic: collection date

text: Rumen sample

characteristic: description

text: temperate grassland biome

characteristic: environment (biome)

text: organism-associated habitat

characteristic: environment (feature)

text: rumen content

characteristic: environment (material)

text: Ft. Macleod, AB

text: Canada Macleod AB

text: 950 m

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

text: elk

text: ARAN 9R

text: host-associated

text: mimarks-survey

text: mature

text: AATTGCGC

text: see PMID:21774582

text: gut metagenome

text: Wild Diversity-PRJEB4222

text: see PMID:21774582

text: gut metagenome

text: 454 FLEX Titanium

text: SSU rRNA

characteristic: target gene

text: Rumen sample from wild ungalates

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: AAC

text: public

text: rumen

text: Rumen sample

text: temperate grassland biome

text: organism-associated habitat

text: rumen content

text: Ft. Macleod, AB

text: Canada Macleod AB

text: 950 m

characteristic: geographic location (longitude)

text: elk

characteristic: host common name

text: ASEC 1J

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: mature

characteristic: life stage

text: AATTGGCC

characteristic: multiplex identifiers

text: see PMID:21774582

characteristic: nucleic acid extraction

text: gut metagenome

characteristic: organism

text: Wild Diversity-PRJEB4222

characteristic: project name

text: see PMID:21774582

characteristic: sample material processing

characteristic: sample storage temperature

text: gut metagenome

text: 454 FLEX Titanium

characteristic: sequencing method

text: SSU rRNA

characteristic: target subfragment

text: Rumen sample from wild ungalates


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

text: AAC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: rumen

characteristic: body site

characteristic: collection date

text: Rumen sample

characteristic: description

text: temperate grassland biome

characteristic: environment (biome)

text: organism-associated habitat

characteristic: environment (feature)

text: rumen content

characteristic: environment (material)

text: Ft. Macleod, AB

text: Canada Macleod AB

text: 950 m

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

text: elk

text: ASEC 1J

text: host-associated

text: mimarks-survey

text: mature

text: ACACACAC

text: see PMID:21774582

text: gut metagenome

text: Wild Diversity-PRJEB4222

text: see PMID:21774582

text: gut metagenome

text: 454 FLEX Titanium

text: SSU rRNA

characteristic: target gene

text: Rumen sample from wild ungalates

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: Sanger Institute/Cambridge University

characteristic: biomaterial provider

text: Primary Cell

characteristic: biomaterial type

text: mature B cell

characteristic: cell type

text: house mouse

characteristic: common name

text: mature resting B cell from BM_B cell_oxWGBS2 (mouse strain C57BL/6J) oxBisulfite-Seq

text: 6 - 8 weeks

characteristic: donor age

text: Male

characteristic: donor sex

text: genomic DNA

characteristic: molecule

text: Mus musculus

characteristic: organism

characteristic: phenotype

characteristic: pool id

text: Mus musculus

characteristic: strain

characteristic: subject id

text: Spleen

characteristic: tissue type


characteristic: ENA-CHECKLIST

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Sanger Institute/Cambridge University

text: Primary Cell

text: mature B cell

text: house mouse

text: mature resting B cell from BF_B cell_oxWGBS1 (mouse strain C57BL/6J) oxBisulfite-Seq

characteristic: description

text: 6 - 8 weeks

text: Female

text: genomic DNA

text: Mus musculus

text: Mus musculus

text: Spleen

characteristic: title


Orosius albicinctus bacteria1

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: ARO-NYRC

text: public

text: Orosius albicinctus bacteria1

characteristic: collection date

characteristic: depth

text: 454 of 16S rRNA gene of bacteria associated with the insect- Orosius albicinctus

text: leafhopper

characteristic: environment (biome)

text: Insect

characteristic: environment (feature)

text: Insect

characteristic: environment (material)

text: Israel

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: microbial mat/biofilm

characteristic: microbial mat/biofilm environmental package

text: Orosius

text: Orosius albicinctus bacteria

characteristic: project name

text: Orosius

characteristic: sequencing method

text: Bacteria associated with the insect- Orosius albicinctus

type: has member


characteristic: ENA-CHECKLIST

text: SRA-Webin

text: EESC/USP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: TCAG

characteristic: adapters

unit: mg/L (over 5 days at 20C)

characteristic: chemical oxygen demand

text: biomass from sludge blanket in reactor RL1

characteristic: description

text: suspended biomass from biological reactor treating wastewater

text: Brazil

text: metagenome

text: CGACGTGACT

characteristic: multiplex identifiers

text: wastewater metagenome

characteristic: organism

text: Removal of surfactant from synthetic and laundry wastewater

text: UASB

characteristic: reactor type

text: Freezer

characteristic: sample storage location

characteristic: sample storage temperature

text: wastewater metagenome

text: 16S RNAr V3

characteristic: target subfragment

characteristic: temperature

characteristic: title

text: wastewater/sludge

characteristic: wastewater/sludge environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: EESC/USP

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: TCAG

characteristic: collection date

text: biomass from phase separator in reactor RL1

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: Brazil

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: TACACACACT

text: wastewater metagenome

characteristic: project name

text: UASB

text: Freezer

text: wastewater metagenome

characteristic: sequencing method

text: 16S RNAr V3

text: wastewater/sludge


text: SRA-Webin

text: EESC/USP

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: TCAG

characteristic: adapters

characteristic: chemical oxygen demand

text: biomass from sludge blanket in reactor RS1

characteristic: description

text: Brazil

text: metagenome

text: TACACGTGAT

characteristic: multiplex identifiers

text: wastewater metagenome

characteristic: organism

text: UASB

characteristic: reactor type

text: Freezer

characteristic: sample storage location

characteristic: sample storage temperature

text: wastewater metagenome

text: 16S RNAr V3

characteristic: target subfragment

characteristic: temperature

characteristic: title

text: wastewater/sludge

characteristic: wastewater/sludge environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: EESC/USP

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: TCAG

characteristic: collection date

text: biomass from phase separator in reactor RS1

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: Brazil

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: TACAGATCGT

text: wastewater metagenome

characteristic: project name

text: UASB

text: Freezer

text: wastewater metagenome

characteristic: sequencing method

text: 16S RNAr V3

text: wastewater/sludge


MHH 2009 colon mouse 1

text: SRA-Webin

text: MHH

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MHH 2009 colon mouse 1

characteristic: Submitter Id

text: 5'-GCCTTGCCAGCCCGCTCAG-multiplex_idendifier-CA; 5'-GCCTTGCCAGCCCGCTCAGTC-3'

characteristic: adapters

unit: day

characteristic: age

text: colon

characteristic: body habitat

text: colon

characteristic: body site

text: Animal facility

text: specific pathogen-free

text: air

characteristic: genotype

text: Germany

text: mouse

characteristic: host common name

text: MHH2009 mouse1

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: mouse batch

text: ACGAGTGCGT

characteristic: multiplex identifiers

text: mouse gut metagenome

characteristic: organism

text: 50 µl reaction containing 30-50 ng DNA, 0.3 µM of each primer, 2.5 mM Mg2+, 0.2 mM of each dNTP, 2.5 U HotMaster Taq Polymerase (5PRIME). Initial denaturation: 95degC_ 2 min; denaturation: 95degC_20 s; annealing: 52degC_20s; elongation: 65degC_1min; 30 cycles.

characteristic: pcr conditions

text: 8F (5'-AGAGTTTGATCCTGGCTCAG-3'), 338R (5'-TGCTGCCTCCCGTAGGAGT-3'); sequencing primer: 338R

characteristic: pcr primers

text: Molecular Determinants of Helicobacter hepaticus pathogenesis

text: mouse gut metagenome

text: pyrosequencing

text: female

characteristic: sex

text: 16S rDNA

characteristic: target gene

text: V1 - V2

characteristic: target subfragment

text: Intestinal microbiota of interleukin-10 deficient C57BL/6J mice.

characteristic: title


MHH 2009 colon mouse 2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MHH 2009 colon mouse 2

characteristic: Submitter Id

characteristic: adapters

characteristic: age

text: colon

text: colon

characteristic: collection date

text: Animal facility

characteristic: environment (biome)

text: specific pathogen-free

characteristic: environment (feature)

text: air

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

text: MHH2009 mouse2

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: ACGCTCGACA

text: mouse gut metagenome

characteristic: project name

text: mouse gut metagenome

text: pyrosequencing

characteristic: sequencing method

text: female

text: 16S rDNA

text: V1 - V2


MHH 2009 colon mouse 3

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC center name

text: public

text: MHH 2009 colon mouse 3

text: colon

characteristic: body habitat

text: colon

characteristic: body site

text: Animal facility

text: specific pathogen-free

text: air

characteristic: genotype

text: Germany

text: mouse

characteristic: host common name

text: MHH2009 mouse3

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: mouse batch

text: AGACGCACTC

characteristic: multiplex identifiers

text: mouse gut metagenome

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: mouse gut metagenome

text: pyrosequencing

text: male

characteristic: sex

text: 16S rDNA

characteristic: target gene

text: V1 - V2

characteristic: target subfragment

characteristic: title


MHH 2009 colon mouse 4

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MHH 2009 colon mouse 4

characteristic: Submitter Id

characteristic: adapters

characteristic: age

text: colon

text: colon

characteristic: collection date

text: Animal facility

characteristic: environment (biome)

text: specific pathogen-free

characteristic: environment (feature)

text: air

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

text: MHH2009 mouse4

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: AGCACTGTAG

text: mouse gut metagenome

characteristic: project name

text: mouse gut metagenome

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rDNA

text: V1 - V2


MHH 2009 colon mouse 5

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC center name

text: public

text: MHH 2009 colon mouse 5

text: colon

characteristic: body habitat

text: colon

characteristic: body site

text: Animal facility

text: specific pathogen-free

text: air

characteristic: genotype

text: Germany

text: mouse

characteristic: host common name

text: MHH2009 mouse5

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: mouse batch

text: ATCAGACACG

characteristic: multiplex identifiers

text: mouse gut metagenome

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: mouse gut metagenome

text: pyrosequencing

text: female

characteristic: sex

text: 16S rDNA

characteristic: target gene

text: V1 - V2

characteristic: target subfragment

characteristic: title


MHH 2009 colon mouse 6

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MHH 2009 colon mouse 6

characteristic: Submitter Id

characteristic: adapters

characteristic: age

text: colon

text: colon

characteristic: collection date

text: Animal facility

characteristic: environment (biome)

text: specific pathogen-free

characteristic: environment (feature)

text: air

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

text: MHH2009 mouse6

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: ATATCGCGAG

text: mouse gut metagenome

characteristic: project name

text: mouse gut metagenome

text: pyrosequencing

characteristic: sequencing method

text: female

text: 16S rDNA

text: V1 - V2


MHH 2009 colon mouse 7

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC center name

text: public

text: MHH 2009 colon mouse 7

text: colon

characteristic: body habitat

text: colon

characteristic: body site

text: Animal facility

text: specific pathogen-free

text: air

characteristic: genotype

text: Germany

text: mouse

characteristic: host common name

text: MHH2009 mouse7

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: mouse batch

text: CGTGTCTCTA

characteristic: multiplex identifiers

text: mouse gut metagenome

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: mouse gut metagenome

text: pyrosequencing

text: male

characteristic: sex

text: 16S rDNA

characteristic: target gene

text: V1 - V2

characteristic: target subfragment

characteristic: title


MIT colon mouse 1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MIT colon mouse 1

characteristic: Submitter Id

characteristic: adapters

characteristic: age

text: colon

text: colon

characteristic: collection date

text: Animal facility

characteristic: environment (biome)

text: specific pathogen-free

characteristic: environment (feature)

text: air

characteristic: environment (material)

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

text: MIT mouse1

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: MIT

text: ACGAGTGCGT

text: mouse gut metagenome

characteristic: project name

text: mouse gut metagenome

text: pyrosequencing

characteristic: sequencing method

text: female

text: 16S rDNA

text: V1 - V2


MIT colon mouse 2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC center name

text: public

text: MIT colon mouse 2

text: colon

characteristic: body habitat

text: colon

characteristic: body site

text: Animal facility

text: specific pathogen-free

text: air

characteristic: genotype

text: USA

text: mouse

characteristic: host common name

text: MIT mouse2

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: MIT

characteristic: mouse batch

text: ACGCTCGACA

characteristic: multiplex identifiers

text: mouse gut metagenome

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: mouse gut metagenome

text: pyrosequencing

text: female

characteristic: sex

text: 16S rDNA

characteristic: target gene

text: V1 - V2

characteristic: target subfragment

characteristic: title


MIT colon mouse 3

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MIT colon mouse 3

characteristic: Submitter Id

characteristic: adapters

characteristic: age

text: colon

text: colon

characteristic: collection date

text: Animal facility

characteristic: environment (biome)

text: specific pathogen-free

characteristic: environment (feature)

text: air

characteristic: environment (material)

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

text: MIT mouse3

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: MIT

text: AGACGCACTC

text: mouse gut metagenome

characteristic: project name

text: mouse gut metagenome

text: pyrosequencing

characteristic: sequencing method

text: female

text: 16S rDNA

text: V1 - V2


MIT colon mouse 4

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC center name

text: public

text: MIT colon mouse 4

text: colon

characteristic: body habitat

text: colon

characteristic: body site

text: Animal facility

text: specific pathogen-free

text: air

characteristic: genotype

text: USA

text: mouse

characteristic: host common name

text: MIT mouse4

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: MIT

characteristic: mouse batch

text: AGCACTGTAG

characteristic: multiplex identifiers

text: mouse gut metagenome

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: mouse gut metagenome

text: pyrosequencing

text: female

characteristic: sex

text: 16S rDNA

characteristic: target gene

text: V1 - V2

characteristic: target subfragment

characteristic: title


MIT colon mouse 5

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MIT colon mouse 5

characteristic: Submitter Id

characteristic: adapters

characteristic: age

text: colon

text: colon

characteristic: collection date

text: Animal facility

characteristic: environment (biome)

text: specific pathogen-free

characteristic: environment (feature)

text: air

characteristic: environment (material)

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

text: MIT mouse5

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: MIT

text: ATCAGACACG

text: mouse gut metagenome

characteristic: project name

text: mouse gut metagenome

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rDNA

text: V1 - V2


MIT colon mouse 6

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC center name

text: public

text: MIT colon mouse 6

text: colon

characteristic: body habitat

text: colon

characteristic: body site

text: Animal facility

text: specific pathogen-free

text: air

characteristic: genotype

text: USA

text: mouse

characteristic: host common name

text: MIT mouse6

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: MIT

characteristic: mouse batch

text: ATATCGCGAG

characteristic: multiplex identifiers

text: mouse gut metagenome

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: mouse gut metagenome

text: pyrosequencing

text: male

characteristic: sex

text: 16S rDNA

characteristic: target gene

text: V1 - V2

characteristic: target subfragment

characteristic: title


MIT colon mouse 7

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MIT colon mouse 7

characteristic: Submitter Id

characteristic: adapters

characteristic: age

text: colon

text: colon

characteristic: collection date

text: Animal facility

characteristic: environment (biome)

text: specific pathogen-free

characteristic: environment (feature)

text: air

characteristic: environment (material)

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

text: MIT mouse7

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: MIT

text: CGTGTCTCTA

text: mouse gut metagenome

characteristic: project name

text: mouse gut metagenome

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rDNA

text: V1 - V2


MHH 2009 colon mouse 8

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC center name

text: public

text: MHH 2009 colon mouse 8

text: colon

characteristic: body habitat

text: colon

characteristic: body site

text: Animal facility

text: specific pathogen-free

text: air

characteristic: genotype

text: Germany

text: mouse

characteristic: host common name

text: MHH2009 mouse8

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: mouse batch

text: CTCGCGTGTC

characteristic: multiplex identifiers

text: mouse gut metagenome

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: mouse gut metagenome

text: pyrosequencing

text: male

characteristic: sex

text: 16S rDNA

characteristic: target gene

text: V1 - V2

characteristic: target subfragment

characteristic: title


MHH 2009 cecum mouse 1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MHH 2009 cecum mouse 1

characteristic: Submitter Id

characteristic: adapters

characteristic: age

text: cecum

text: cecum

characteristic: collection date

text: Animal facility

characteristic: environment (biome)

text: specific pathogen-free

characteristic: environment (feature)

text: air

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

text: MHH2009 mouse1

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: ACGAGTGCGT

text: mouse gut metagenome

characteristic: project name

text: mouse gut metagenome

text: pyrosequencing

characteristic: sequencing method

text: female

text: 16S rDNA

text: V1 - V2


MHH 2009 cecum mouse 2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC center name

text: public

text: MHH 2009 cecum mouse 2

text: cecum

characteristic: body habitat

text: cecum

characteristic: body site

text: Animal facility

text: specific pathogen-free

text: air

characteristic: genotype

text: Germany

text: mouse

characteristic: host common name

text: MHH2009 mouse2

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: mouse batch

text: ACGCTCGACA

characteristic: multiplex identifiers

text: mouse gut metagenome

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: mouse gut metagenome

text: pyrosequencing

text: female

characteristic: sex

text: 16S rDNA

characteristic: target gene

text: V1 - V2

characteristic: target subfragment

characteristic: title


MHH 2009 cecum mouse 3

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MHH 2009 cecum mouse 3

characteristic: Submitter Id

characteristic: adapters

characteristic: age

text: cecum

text: cecum

characteristic: collection date

text: Animal facility

characteristic: environment (biome)

text: specific pathogen-free

characteristic: environment (feature)

text: air

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

text: MHH2009 mouse3

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: AGACGCACTC

text: mouse gut metagenome

characteristic: project name

text: mouse gut metagenome

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rDNA

text: V1 - V2


MHH 2009 cecum mouse 4

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC center name

text: public

text: MHH 2009 cecum mouse 4

text: cecum

characteristic: body habitat

text: cecum

characteristic: body site

text: Animal facility

text: specific pathogen-free

text: air

characteristic: genotype

text: Germany

text: mouse

characteristic: host common name

text: MHH2009 mouse4

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: mouse batch

text: AGCACTGTAG

characteristic: multiplex identifiers

text: mouse gut metagenome

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: mouse gut metagenome

text: pyrosequencing

text: male

characteristic: sex

text: 16S rDNA

characteristic: target gene

text: V1 - V2

characteristic: target subfragment

characteristic: title


MHH 2009 cecum mouse 5

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MHH 2009 cecum mouse 5

characteristic: Submitter Id

characteristic: adapters

characteristic: age

text: cecum

text: cecum

characteristic: collection date

text: Animal facility

characteristic: environment (biome)

text: specific pathogen-free

characteristic: environment (feature)

text: air

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

text: MHH2009 mouse5

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: ATCAGACACG

text: mouse gut metagenome

characteristic: project name

text: mouse gut metagenome

text: pyrosequencing

characteristic: sequencing method

text: female

text: 16S rDNA

text: V1 - V2


MHH 2009 cecum mouse 6

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC center name

text: public

text: MHH 2009 cecum mouse 6

text: cecum

characteristic: body habitat

text: cecum

characteristic: body site

text: Animal facility

text: specific pathogen-free

text: air

characteristic: genotype

text: Germany

text: mouse

characteristic: host common name

text: MHH2009 mouse6

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: mouse batch

text: ATATCGCGAG

characteristic: multiplex identifiers

text: mouse gut metagenome

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: mouse gut metagenome

text: pyrosequencing

text: female

characteristic: sex

text: 16S rDNA

characteristic: target gene

text: V1 - V2

characteristic: target subfragment

characteristic: title


MIT colon mouse 8

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MIT colon mouse 8

characteristic: Submitter Id

characteristic: adapters

characteristic: age

text: colon

text: colon

characteristic: collection date

text: Animal facility

characteristic: environment (biome)

text: specific pathogen-free

characteristic: environment (feature)

text: air

characteristic: environment (material)

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

text: MIT mouse8

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: MIT

text: CTCGCGTGTC

text: mouse gut metagenome

characteristic: project name

text: mouse gut metagenome

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rDNA

text: V1 - V2


MHH 2009 cecum mouse 7

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC center name

text: public

text: MHH 2009 cecum mouse 7

text: cecum

characteristic: body habitat

text: cecum

characteristic: body site

text: Animal facility

text: specific pathogen-free

text: air

characteristic: genotype

text: Germany

text: mouse

characteristic: host common name

text: MHH2009 mouse7

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: mouse batch

text: CGTGTCTCTA

characteristic: multiplex identifiers

text: mouse gut metagenome

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: mouse gut metagenome

text: pyrosequencing

text: male

characteristic: sex

text: 16S rDNA

characteristic: target gene

text: V1 - V2

characteristic: target subfragment

characteristic: title


MHH 2009 cecum mouse 8

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MHH 2009 cecum mouse 8

characteristic: Submitter Id

characteristic: adapters

characteristic: age

text: cecum

text: cecum

characteristic: collection date

text: Animal facility

characteristic: environment (biome)

text: specific pathogen-free

characteristic: environment (feature)

text: air

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

text: MHH2009 mouse8

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: CTCGCGTGTC

text: mouse gut metagenome

characteristic: project name

text: mouse gut metagenome

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rDNA

text: V1 - V2


MHH 2011 cecum mouse 4

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC center name

text: public

text: MHH 2011 cecum mouse 4

text: 5'-CCATCTCATCCCTGCGTGTCTCCGACTCAG-multiplex_idendifier-AC; 5'-CCTATCCCCTGTGTGCCTTGGCAGTCTCAG-TC-3'

text: cecum

characteristic: body habitat

text: cecum

characteristic: body site

text: Animal facility

text: specific pathogen-free

text: air

characteristic: genotype

text: Germany

text: mouse

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: human-associated

characteristic: human associated environmental package

text: mimarks-survey

text: AGCACTGTAG

characteristic: multiplex identifiers

text: mouse gut metagenome

characteristic: organism

text: 50 µl reaction containing 30 ng DNA, 0.3 µM of each primer, 2.5 mM Mg2+, 0.2 mM of each dNTP, 2.5 U HotMaster Taq Polymerase (5PRIME). Initial denaturation: 95degC_ 2 min; denaturation: 94degC_30 s; annealing: 60degC_30s; elongation: 72degC_80 s; 30 cycles.

characteristic: pcr conditions

text: 8F (5'-AGAGTTTGATCCTGGCTCAG-3'), 541R (5'-WTTACCGCGGCTGCTGG-3'); sequencing primer: 541R

characteristic: pcr primers

text: mouse gut metagenome

text: pyrosequencing

text: female

characteristic: sex

text: 16S rDNA

characteristic: target gene

text: V1 - V3

characteristic: target subfragment

characteristic: title


MHH 2011 cecum mouse 5

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MHH 2011 cecum mouse 5

characteristic: Submitter Id

characteristic: adapters

characteristic: age

text: cecum

text: cecum

characteristic: collection date

text: Animal facility

characteristic: environment (biome)

text: specific pathogen-free

characteristic: environment (feature)

text: air

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

text: human-associated

text: mimarks-survey

characteristic: investigation type

text: ATCAGACACG

text: mouse gut metagenome

characteristic: project name

text: mouse gut metagenome

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rDNA

text: V1 - V3


MHH 2011 cecum mouse 6

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC center name

text: public

text: MHH 2011 cecum mouse 6

text: cecum

characteristic: body habitat

text: cecum

characteristic: body site

text: Animal facility

text: specific pathogen-free

text: air

characteristic: genotype

text: Germany

text: mouse

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: human-associated

characteristic: human associated environmental package

text: mimarks-survey

text: ATATCGCGAG

characteristic: multiplex identifiers

text: mouse gut metagenome

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: mouse gut metagenome

text: pyrosequencing

text: male

characteristic: sex

text: 16S rDNA

characteristic: target gene

text: V1 - V3

characteristic: target subfragment

characteristic: title


MHH 2011 cecum mouse 7

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MHH 2011 cecum mouse 7

characteristic: Submitter Id

characteristic: adapters

characteristic: age

text: cecum

text: cecum

characteristic: collection date

text: Animal facility

characteristic: environment (biome)

text: specific pathogen-free

characteristic: environment (feature)

text: air

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

text: human-associated

text: mimarks-survey

characteristic: investigation type

text: CGTGTCTCTA

text: mouse gut metagenome

characteristic: project name

text: mouse gut metagenome

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rDNA

text: V1 - V3


MHH 2011 cecum mouse 8

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC center name

text: public

text: MHH 2011 cecum mouse 8

text: cecum

characteristic: body habitat

text: cecum

characteristic: body site

text: Animal facility

text: specific pathogen-free

text: air

characteristic: genotype

text: Germany

text: mouse

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: human-associated

characteristic: human associated environmental package

text: mimarks-survey

text: CTCGCGTGTC

characteristic: multiplex identifiers

text: mouse gut metagenome

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: mouse gut metagenome

text: pyrosequencing

text: male

characteristic: sex

text: 16S rDNA

characteristic: target gene

text: V1 - V3

characteristic: target subfragment

characteristic: title


MIT cecum mouse 1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MIT cecum mouse 1

characteristic: Submitter Id

characteristic: adapters

characteristic: age

text: cecum

text: cecum

characteristic: collection date

text: Animal facility

characteristic: environment (biome)

text: specific pathogen-free

characteristic: environment (feature)

text: air

characteristic: environment (material)

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

text: MIT mouse1

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: MIT

characteristic: mouse batch

text: ACGAGTGCGT

text: mouse gut metagenome

characteristic: project name

text: mouse gut metagenome

text: pyrosequencing

characteristic: sequencing method

text: female

text: 16S rDNA

text: V1 - V2


MIT cecum mouse 2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: MIT cecum mouse 2

text: cecum

characteristic: body habitat

text: cecum

characteristic: body site

text: Animal facility

text: specific pathogen-free

text: air

characteristic: genotype

text: USA

text: mouse

characteristic: host common name

text: MIT mouse2

characteristic: host subject id

characteristic: host taxid

text: host-associated

text: mimarks-survey

text: MIT

text: ACGCTCGACA

characteristic: multiplex identifiers

text: mouse gut metagenome

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: mouse gut metagenome

text: pyrosequencing

text: female

characteristic: sex

text: 16S rDNA

characteristic: target gene

text: V1 - V2

characteristic: target subfragment

characteristic: title


MIT cecum mouse 3

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MIT cecum mouse 3

characteristic: Submitter Id

characteristic: adapters

characteristic: age

text: cecum

text: cecum

characteristic: collection date

text: Animal facility

characteristic: environment (biome)

text: specific pathogen-free

characteristic: environment (feature)

text: air

characteristic: environment (material)

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

text: MIT mouse3

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: MIT

characteristic: mouse batch

text: AGACGCACTC

text: mouse gut metagenome

characteristic: project name

text: mouse gut metagenome

text: pyrosequencing

characteristic: sequencing method

text: female

text: 16S rDNA

text: V1 - V2


MIT cecum mouse 4

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: MIT cecum mouse 4

text: cecum

characteristic: body habitat

text: cecum

characteristic: body site

text: Animal facility

text: specific pathogen-free

text: air

characteristic: genotype

text: USA

text: mouse

characteristic: host common name

text: MIT mouse4

characteristic: host subject id

characteristic: host taxid

text: host-associated

text: mimarks-survey

text: MIT

text: AGCACTGTAG

characteristic: multiplex identifiers

text: mouse gut metagenome

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: mouse gut metagenome

text: pyrosequencing

text: female

characteristic: sex

text: 16S rDNA

characteristic: target gene

text: V1 - V2

characteristic: target subfragment

characteristic: title


MIT cecum mouse 5

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MIT cecum mouse 5

characteristic: Submitter Id

characteristic: adapters

characteristic: age

text: cecum

text: cecum

characteristic: collection date

text: Animal facility

characteristic: environment (biome)

text: specific pathogen-free

characteristic: environment (feature)

text: air

characteristic: environment (material)

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

text: MIT mouse5

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: MIT

characteristic: mouse batch

text: ATCAGACACG

text: mouse gut metagenome

characteristic: project name

text: mouse gut metagenome

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rDNA

text: V1 - V2


MIT cecum mouse 6

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: MIT cecum mouse 6

text: cecum

characteristic: body habitat

text: cecum

characteristic: body site

text: Animal facility

text: specific pathogen-free

text: air

characteristic: genotype

text: USA

text: mouse

characteristic: host common name

text: MIT mouse6

characteristic: host subject id

characteristic: host taxid

text: host-associated

text: mimarks-survey

text: MIT

text: ATATCGCGAG

characteristic: multiplex identifiers

text: mouse gut metagenome

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: mouse gut metagenome

text: pyrosequencing

text: male

characteristic: sex

text: 16S rDNA

characteristic: target gene

text: V1 - V2

characteristic: target subfragment

characteristic: title


MIT cecum mouse 7

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MIT cecum mouse 7

characteristic: Submitter Id

characteristic: adapters

characteristic: age

text: cecum

text: cecum

characteristic: collection date

text: Animal facility

characteristic: environment (biome)

text: specific pathogen-free

characteristic: environment (feature)

text: air

characteristic: environment (material)

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

text: MIT mouse7

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: MIT

characteristic: mouse batch

text: CGTGTCTCTA

text: mouse gut metagenome

characteristic: project name

text: mouse gut metagenome

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rDNA

text: V1 - V2


MIT cecum mouse 8

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: MIT cecum mouse 8

text: cecum

characteristic: body habitat

text: cecum

characteristic: body site

text: Animal facility

text: specific pathogen-free

text: air

characteristic: genotype

text: USA

text: mouse

characteristic: host common name

text: MIT mouse8

characteristic: host subject id

characteristic: host taxid

text: host-associated

text: mimarks-survey

text: MIT

text: CTCGCGTGTC

characteristic: multiplex identifiers

text: mouse gut metagenome

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: mouse gut metagenome

text: pyrosequencing

text: male

characteristic: sex

text: 16S rDNA

characteristic: target gene

text: V1 - V2

characteristic: target subfragment

characteristic: title


MHH 2011 cecum mouse 1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MHH 2011 cecum mouse 1

characteristic: Submitter Id

characteristic: adapters

characteristic: age

text: cecum

text: cecum

characteristic: collection date

text: Animal facility

characteristic: environment (biome)

text: specific pathogen-free

characteristic: environment (feature)

text: air

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

text: human-associated

characteristic: human associated environmental package

text: mimarks-survey

characteristic: investigation type

text: ACGAGTGCGT

text: mouse gut metagenome

characteristic: project name

text: mouse gut metagenome

text: pyrosequencing

characteristic: sequencing method

text: female

text: 16S rDNA

text: V1 - V3


MHH 2011 cecum mouse 2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: MHH 2011 cecum mouse 2

text: cecum

characteristic: body habitat

text: cecum

characteristic: body site

text: Animal facility

text: specific pathogen-free

text: air

characteristic: genotype

text: Germany

text: mouse

characteristic: host common name

characteristic: host subject id

characteristic: host taxid

text: human-associated

text: mimarks-survey

text: ACGCTCGACA

characteristic: multiplex identifiers

text: mouse gut metagenome

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

text: mouse gut metagenome

text: pyrosequencing

text: female

characteristic: sex

text: 16S rDNA

characteristic: target gene

text: V1 - V3

characteristic: target subfragment

characteristic: title


MHH 2011 cecum mouse 3

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: MHH

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MHH 2011 cecum mouse 3

characteristic: Submitter Id

characteristic: adapters

characteristic: age

text: cecum

text: cecum

characteristic: collection date

text: Animal facility

characteristic: environment (biome)

text: specific pathogen-free

characteristic: environment (feature)

text: air

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

text: human-associated

characteristic: human associated environmental package

text: mimarks-survey

characteristic: investigation type

text: AGACGCACTC

text: mouse gut metagenome

characteristic: project name

text: mouse gut metagenome

text: pyrosequencing

characteristic: sequencing method

text: female

text: 16S rDNA

text: V1 - V3


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPI-MM

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: depth

text: deep-sea

text: hydrothermal vent

text: water

text: Papua New Guinea

characteristic: geographic location (elevation)

text: mimarks-survey

text: uncultured marine microorganism

characteristic: organism

text: Sulfur cycling in marine benthic systems

text: uncultured marine microorganism

text: sediment

characteristic: sediment environmental package

text: pyrosequencing

text: Bottom water Manus Basin

characteristic: title


NS-Ia

text: MPI-MM

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: NS-Ia

characteristic: Submitter Id

characteristic: collection date

text: deep-sea

characteristic: environment (biome)

text: hydrothermal vent

characteristic: environment (feature)

text: rock

characteristic: environment (material)

text: Papua New Guinea

characteristic: geographic location (latitude)

text: mimarks-survey

text: uncultured marine microorganism

text: uncultured marine microorganism

text: sediment

text: pyrosequencing

text: Volcanogenic sulfur Manus Basin


NS-Ib

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPI-MM

text: public

text: NS-Ib

text: deep-sea

text: hydrothermal vent

text: rock

text: Papua New Guinea

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: uncultured marine microorganism

characteristic: project name

text: uncultured marine microorganism

text: sediment

text: pyrosequencing

characteristic: sequencing method

text: Volcanogenic sulfur Manus Basin


NS-II

text: MPI-MM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: NS-II

characteristic: depth

text: deep-sea

text: hydrothermal vent

text: rock

text: Papua New Guinea

characteristic: geographic location (elevation)

text: mimarks-survey

text: uncultured marine microorganism

characteristic: organism

text: uncultured marine microorganism

text: sediment

characteristic: sediment environmental package

text: pyrosequencing

text: Volcanogenic sulfur Manus Basin

characteristic: title


NS-III

text: MPI-MM

text: public

characteristic: INSDC status

characteristic: SRA accession

text: NS-III

characteristic: Submitter Id

characteristic: collection date

text: deep-sea

characteristic: environment (biome)

text: hydrothermal vent

characteristic: environment (feature)

text: rock

characteristic: environment (material)

text: Papua New Guinea

characteristic: geographic location (latitude)

text: mimarks-survey

text: uncultured marine microorganism

text: uncultured marine microorganism

text: sediment

text: pyrosequencing

text: Volcanogenic sulfur Manus Basin


Guaymas Basin_BM3b

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPI-MM

text: public

text: Guaymas Basin_BM3b

text: microbial mat

text: hydrothermal vent

text: sediment

text: Mexico

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: unidentified archaeon

text: Nitrification in Beggiatoa mats

characteristic: project name

text: unidentified archaeon

text: sediment

text: pyrosequencing

characteristic: sequencing method

text: Beggiatoa mat-Guaymas Basin


text: MPI-MM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: hydrothermal vent

text: deep-sea

text: sea water

text: Mexico

characteristic: geographic location (depth)

text: metagenome

text: unidentified archaeon

characteristic: organism

text: BM

text: unidentified archaeon

text: pyrosequencing

text: BM

characteristic: title

text: water

characteristic: water environmental package


text: MPI-MM

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: hydrothermal vent

characteristic: environment (biome)

text: deep-sea

characteristic: environment (feature)

text: sediment

characteristic: environment (material)

text: Mexico

text: metagenome

text: unidentified archaeon

text: BM

text: unidentified archaeon

text: pyrosequencing

text: BM

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VETMEDUNI

text: public

text: Gut Bos taurus

text: Bos taurus

text: Faeces

text: Austria

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: bovine gut metagenome

text: Faecal microbiota of Simmental dairy calves

text: bovine gut metagenome

text: Roche/454 pyrosequencing

text: faecal microbiota


text: VETMEDUNI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Bos taurus

text: Bos taurus

text: Faeces

text: Austria

text: host-associated

text: metagenome

text: bovine gut metagenome

characteristic: organism

characteristic: project name

text: bovine gut metagenome

text: Roche/454 pyrosequencing

characteristic: sequencing method

text: faecal microbiota

characteristic: title


text: VETMEDUNI

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Bos taurus

characteristic: environment (biome)

text: Gut Bos taurus

characteristic: environment (feature)

text: Faeces

text: Austria

text: host-associated

text: metagenome

text: bovine gut metagenome

text: bovine gut metagenome

text: Roche/454 pyrosequencing

text: faecal microbiota


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIM

text: public

unit: g

characteristic: amount or size of sample collected

text: ENA

characteristic: broker name

text: Mallard

characteristic: chimera check

characteristic: depth

text: temperate shelf and sea

text: cold seep

text: sediment

characteristic: environment (material)

text: Japan

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

text: mimarks-survey

text: p-GEM T-Easy

characteristic: library vector

text: <0.1 mM

characteristic: methane concentration range

text: PCR

characteristic: nucleic acid amplification

text: Zhou et al 1996 and Wizard clean-up (Promega)

characteristic: nucleic acid extraction

text: marine sediment metagenome

unit: bar

characteristic: pressure

text: Anaerobic methanotrophic community at 5346 m-deep vesicomyid clam colony in the Japan Trench

text: Pushcore

characteristic: sample collection device or method

unit: year

characteristic: sample storage duration

text: MPI Bremen

characteristic: sample storage location

characteristic: sample storage temperature

text: marine sediment metagenome

text: sediment

characteristic: sediment environmental package

text: manual

characteristic: sequence quality check

text: Sanger

text: 22-28 mM

characteristic: sulfate concentration range

characteristic: temperature

text: Japan Trench sediment sample from rim of clam patch


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: amount or size of sample collected

text: ENA

characteristic: broker name

text: Mallard

characteristic: chimera check

characteristic: collection date

characteristic: depth

text: temperate shelf and sea

characteristic: environment (biome)

text: cold seep

characteristic: environment (feature)

text: sediment

text: Japan

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: p-GEM T-Easy

text: PCR

text: marine sediment metagenome

characteristic: organism

characteristic: project name

text: Pushcore

text: MPI Bremen

text: marine sediment metagenome

text: sediment

text: manual

text: Sanger

characteristic: sequencing method

text: 1-16 mM

text: Japan Trench sediment sample from center of clam patch

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: BUGS

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: UK

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: Human

characteristic: host scientific name

text: Blood culture

characteristic: isolation source

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa

characteristic: strain

text: Patient A organism


text: BUGS

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Isolated from sink in room of Patient A

characteristic: description

text: UK

text: Environment

text: Environment

text: Environment

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa

text: Patient A sink


characteristic: ENA-CHECKLIST

text: BUGS

text: public

text: 6 year old isolate

text: UK

text: diseased

text: Human

text: Blood culture

text: Pseudomonas aeruginosa

characteristic: organism

text: Pseudomonas aeruginosa

text: Patient B

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: BUGS

text: public

text: UK

text: diseased

text: Human

text: Blood culture

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa

text: Patient


text: BUGS

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: UK

text: Environment

text: Environment

text: Environment

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa

text: Shower


text: BUGS

text: public

text: UK

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: Human

characteristic: host scientific name

text: Blood culture

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa

text: Patient C


text: BUGS

text: public

characteristic: INSDC status

text: Isolated from sink in room of Patient A

text: UK

text: Environment

text: Environment

text: Environment

characteristic: isolation source

text: Pseudomonas putida

text: Pseudomonas putida

characteristic: strain

text: Patient A sink


PASwab

text: BUGS

text: public

characteristic: SRA accession

text: PASwab

characteristic: Submitter Id

characteristic: collection date

text: Moores swab isolate

text: UK

text: Environment

text: Environment

text: Environment

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa

text: PASwab

text: Sewer swab


AS-O

characteristic: ENA-CHECKLIST

text: NCKU

text: public

text: AS-O

text: dioxin-polluted site

characteristic: current land use

characteristic: depth

text: sample ID, AS_O

characteristic: description

text: subtropical grassland biome

characteristic: environment (biome)

text: dioxin contamination site

characteristic: environment (feature)

text: contaminated soil

characteristic: environment (material)

text: Taiwan

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: pentachlorophenol manufacturing

characteristic: history/previous land use

text: metagenome

characteristic: investigation type

text: PCR

characteristic: nucleic acid amplification

text: modified from Miller method

characteristic: nucleic acid extraction

text: soil metagenome

characteristic: organism

text: 40cycles of 94degC_15s, 50degC_45s, 72degC_1min

characteristic: pcr conditions

characteristic: pcr primers

characteristic: ph

text: Pyrosequencing of dioxin-contaiminated soil soil consortia

characteristic: project name

text: soil metagenome

text: 454 GS Junior pyrosequencing

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: 16S rRNA

characteristic: target gene

text: Dioxin-dgrading consortia

unit: g/kg

characteristic: total n

characteristic: total organic carbon


AS-G

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NCKU

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: AS-G

characteristic: Submitter Id

characteristic: collection date

text: dioxin-polluted site

characteristic: current land use

characteristic: depth

text: subtropical grassland biome

characteristic: environment (biome)

text: dioxin contamination site

characteristic: environment (feature)

text: contaminated soil

characteristic: environment (material)

text: Taiwan

characteristic: geographic location (elevation)

text: pentachlorophenol manufacturing

text: metagenome

text: PCR

text: modified from Miller method

text: soil metagenome

text: soil metagenome

text: 454 GS Junior pyrosequencing

text: soil

text: 16S rRNA

text: Dioxin-dgrading consortia

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: NCKU

text: public

text: dioxin-polluted site

text: subtropical grassland biome

text: dioxin contamination site

text: contaminated soil

text: Taiwan

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: pentachlorophenol manufacturing

characteristic: history/previous land use

text: metagenome

characteristic: investigation type

text: PCR

characteristic: nucleic acid amplification

text: modified from Miller method

characteristic: nucleic acid extraction

text: soil metagenome

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

characteristic: ph

characteristic: project name

text: soil metagenome

text: 454 GS Junior pyrosequencing

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: 16S rRNA

characteristic: target gene

text: Dioxin-dgrading consortia

characteristic: total n

characteristic: total organic carbon


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Sanger Institute/Cambridge University

characteristic: biomaterial provider

text: Primary Cell

characteristic: biomaterial type

text: mature B cell

characteristic: cell type

text: house mouse

characteristic: common name

text: mature resting B cell from BF_B cell_RNA1 (mouse strain C57BL/6J) RNA_Seq

characteristic: description

text: 6 - 8 weeks

characteristic: donor age

text: Female

characteristic: donor sex

text: total RNA

characteristic: molecule

text: Mus musculus

characteristic: phenotype

characteristic: pool id

text: Mus musculus

characteristic: strain

characteristic: subject id

text: Spleen

characteristic: tissue type

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Sanger Institute/Cambridge University

text: Primary Cell

text: mature B cell

text: house mouse

text: mature resting B cell from BF_B cell_RNA2 (mouse strain C57BL/6J) RNA_Seq

text: 6 - 8 weeks

text: Female

text: total RNA

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Spleen


text: SC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Sanger Institute/Cambridge University

characteristic: biomaterial provider

text: Primary Cell

characteristic: biomaterial type

text: mature B cell

characteristic: cell type

text: house mouse

characteristic: common name

text: mature resting B cell from BF_B cell_RNA3 (mouse strain C57BL/6J) RNA_Seq

characteristic: description

text: 6 - 8 weeks

characteristic: donor age

text: Female

characteristic: donor sex

text: total RNA

text: Mus musculus

text: Mus musculus

text: Spleen


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: AusCT_28-sc-2013-09-27T11:01:57Z-1694267

characteristic: anonymized name

characteristic: collection date

text: Chlamydia trachomatis L2b/UCH-1/proctitis

text: Australia

characteristic: country

text: diseased

characteristic: host status

text: Swab

characteristic: isolation source

text: Ba

characteristic: serovar

text: Homo sapiens

characteristic: specific host

characteristic: strain

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: AusCT_30-sc-2013-09-27T11:02:37Z-1694268

characteristic: Submitter Id

text: Australia

text: diseased

text: Swab

characteristic: organism

text: C

text: Homo sapiens


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: AusCT_33-sc-2013-09-27T11:03:06Z-1694269

characteristic: anonymized name

characteristic: collection date

characteristic: common name

text: Australia

text: diseased

text: Swab

text: C

text: Homo sapiens


text: SC

text: public

text: AusCT_36-sc-2013-09-27T11:03:42Z-1694270

text: Australia

characteristic: country

text: diseased

characteristic: host status

text: Swab

characteristic: isolation source

text: B

characteristic: serovar

text: Homo sapiens

characteristic: specific host


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: AusCT_25-sc-2013-09-27T11:07:49Z-1695616

text: Australia

text: diseased

text: Swab

text: Ba

text: Homo sapiens

characteristic: strain

characteristic: title


text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Sanger Institute/Cambridge University

characteristic: biomaterial provider

text: Primary Cell

characteristic: biomaterial type

text: mature B cell

characteristic: cell type

text: house mouse

text: mature resting B cell from BM_B cell_RNA1 (mouse strain C57BL/6J) RNA_Seq

characteristic: description

text: 6 - 8 weeks

characteristic: donor age

text: Male

characteristic: donor sex

text: total RNA

characteristic: molecule

text: Mus musculus

characteristic: phenotype

characteristic: pool id

text: Mus musculus

characteristic: subject id

text: Spleen

characteristic: tissue type


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: Sanger Institute/Cambridge University

text: Primary Cell

text: mature B cell

text: house mouse

characteristic: common name

text: mature resting B cell from BM_B cell_RNA2 (mouse strain C57BL/6J) RNA_Seq

text: 6 - 8 weeks

text: Male

text: total RNA

text: Mus musculus

characteristic: organism

text: Mus musculus

characteristic: strain

text: Spleen

characteristic: title


text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Sanger Institute/Cambridge University

characteristic: biomaterial provider

text: Primary Cell

characteristic: biomaterial type

text: mature B cell

characteristic: cell type

text: house mouse

text: mature resting B cell from BM_B cell_RNA3 (mouse strain C57BL/6J) RNA_Seq

characteristic: description

text: 6 - 8 weeks

text: Male

text: total RNA

text: Mus musculus

text: Mus musculus

text: Spleen


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: Sanger Institute/Cambridge University

text: Primary Cell

text: CD4-positive, alpha-beta T cell

text: house mouse

text: naive CD4 positive T cells from BF_CD4_T cell_RNA1 (mouse strain C57BL/6J) RNA_Seq

text: 6 - 8 weeks

characteristic: donor age

text: Female

characteristic: donor sex

text: CD4-positive_CD62L-positive_CD44-low_CD25-negative

characteristic: markers

text: total RNA

characteristic: molecule

text: Mus musculus

characteristic: phenotype

characteristic: pool id

text: Mus musculus

characteristic: subject id

text: Spleen

characteristic: tissue type


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Sanger Institute/Cambridge University

text: Primary Cell

text: CD4-positive, alpha-beta T cell

text: house mouse

characteristic: common name

text: naive CD4 positive T cells from BF_CD4_T cell_RNA2 (mouse strain C57BL/6J) RNA_Seq

text: 6 - 8 weeks

text: Female

text: total RNA

text: Mus musculus

characteristic: organism

text: Mus musculus

characteristic: strain

text: Spleen

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Sanger Institute/Cambridge University

characteristic: biomaterial provider

text: Primary Cell

characteristic: biomaterial type

text: CD4-positive, alpha-beta T cell

characteristic: cell type

text: house mouse

text: naive CD4 positive T cells from BF_CD4_T cell_RNA3 (mouse strain C57BL/6J) RNA_Seq

characteristic: description

text: 6 - 8 weeks

characteristic: donor age

text: Female

characteristic: donor sex

text: total RNA

text: Mus musculus

text: Mus musculus

text: Spleen


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Sanger Institute/Cambridge University

text: Primary Cell

text: CD4-positive, alpha-beta T cell

text: house mouse

text: naive CD4 positive T cells from BM_CD4_T cell_RNA1 (mouse strain C57BL/6J) RNA_Seq

text: 6 - 8 weeks

text: Male

characteristic: markers

text: total RNA

characteristic: molecule

text: Mus musculus

characteristic: phenotype

characteristic: pool id

text: Mus musculus

characteristic: subject id

text: Spleen

characteristic: tissue type


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Sanger Institute/Cambridge University

text: Primary Cell

text: CD4-positive, alpha-beta T cell

text: house mouse

characteristic: common name

text: naive CD4 positive T cells from BM_CD4_T cell_RNA2 (mouse strain C57BL/6J) RNA_Seq

text: 6 - 8 weeks

text: Male

text: total RNA

text: Mus musculus

characteristic: organism

text: Mus musculus

characteristic: strain

text: Spleen

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Sanger Institute/Cambridge University

characteristic: biomaterial provider

text: Primary Cell

characteristic: biomaterial type

text: CD4-positive, alpha-beta T cell

characteristic: cell type

text: house mouse

text: naive CD4 positive T cells from BM_CD4_T cell_RNA3 (mouse strain C57BL/6J) RNA_Seq

characteristic: description

text: 6 - 8 weeks

characteristic: donor age

text: Male

characteristic: donor sex

text: total RNA

text: Mus musculus

text: Mus musculus

text: Spleen


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: CSISP

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Supragingival dental plaque

characteristic: bio material

characteristic: collection date

text: human

text: Spain

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: host

text: Total RNA

characteristic: note

text: Homo sapiens

text: Homo sapiens

text: human oral biofilm


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: FOI

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: strain derived from FSC074

text: Sweden

text: dead

characteristic: host health state

text: Hare

characteristic: host scientific name

text: Dalarna county

characteristic: isolation source

text: Francisella tularensis subsp. holarctica

characteristic: organism

characteristic: strain

text: holarctica

characteristic: sub species

text: Human clinical isolate

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: FOI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Sweden

text: diseased

text: Hare

text: Dalarna county

text: holarctica

text: Human clinical isolate


characteristic: ENA-LAST-UPDATE

text: FOI

text: public

characteristic: collection date

text: Sweden

characteristic: geographic location (country and/or sea)

text: diseased

text: Human

text: Dalarna county

text: holarctica

text: Human clinical isolate


characteristic: External Id

text: FOI

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: Finland

text: diseased

text: Human

text: Northern Ostrobothnia region

text: holarctica

text: Human clinical isolate


text: FOI

text: public

characteristic: Submitter Id

text: Sweden

text: diseased

characteristic: host health state

text: Human

characteristic: host scientific name

text: County of Uppland

text: holarctica

text: Human clinical isolate


text: FOI

text: public

text: Sweden

text: diseased

text: Human

text: County of Örebro

characteristic: isolation source

characteristic: organism

characteristic: strain

text: holarctica

text: Human clinical isolate


characteristic: ENA-CHECKLIST

text: FOI

text: public

text: Sweden

text: diseased

text: Human

text: Stockholm county

text: holarctica

characteristic: sub species

text: Human clinical isolate

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: FOI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Sweden

text: diseased

text: Human

text: Örebro county

text: holarctica

text: Human clinical isolate


characteristic: ENA-LAST-UPDATE

text: FOI

text: public

characteristic: INSDC status

characteristic: collection date

text: Sweden

text: diseased

text: Human

text: Örebro county

text: holarctica

text: Human clinical isolate


characteristic: External Id

text: FOI

characteristic: INSDC center name

text: public

text: Sweden

characteristic: geographic location (country and/or sea)

text: diseased

text: Human

text: Norrbotten county

text: holarctica

text: Human clinical isolate


text: FOI

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Sweden

text: diseased

characteristic: host health state

text: Human

text: Värmland county

text: holarctica

text: Human clinical isolate


text: FOI

text: public

text: Sweden

text: diseased

text: Human

characteristic: host scientific name

text: Jämtland county

characteristic: isolation source

characteristic: organism

text: holarctica

text: Human clinical isolate


characteristic: ENA-CHECKLIST

text: FOI

text: public

text: Sweden

text: diseased

text: Human

text: Västra Götaland county

characteristic: strain

text: holarctica

characteristic: sub species

text: Human clinical isolate


characteristic: ENA-FIRST-PUBLIC

text: IUBT

characteristic: INSDC first public

text: public

text: Sample is composed of 4 independent replicates that were pooled together in equimolar ratio prior to sequencing.

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: sphagnum bog

characteristic: environment (feature)

text: plants

characteristic: environment (material)

text: Austria

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: gametophyte

characteristic: life stage

text: plant metagenome

text: plant-associated

characteristic: plant-associated environmental package

text: Microbial diversity associated with Sphagnum mosses

characteristic: project name

text: plant metagenome

text: pyrosequencing

characteristic: sequencing method

text: S. magellanicum microbiome (Austria, Styria, Rotmoos)

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IUBT

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: terrestrial biome

text: sphagnum bog

text: plants

text: Austria

text: mimarks-survey

text: gametophyte

text: plant metagenome

characteristic: organism

text: plant-associated

text: plant metagenome

text: pyrosequencing

text: S. magellanicum microbiome (Austria, Salzburg, Wasenmoos)


characteristic: ENA-FIRST-PUBLIC

text: IUBT

characteristic: INSDC first public

text: public

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: sphagnum bog

characteristic: environment (feature)

text: plants

characteristic: environment (material)

text: Austria

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host taxid

text: mimarks-survey

text: gametophyte

text: plant metagenome

text: plant-associated

text: plant metagenome

text: pyrosequencing

text: S. magellanicum microbiome (Austria, Styria, Pürgschachen Moor)


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IUBT

characteristic: INSDC center name

text: public

text: terrestrial biome

text: sphagnum bog

text: plants

text: Austria

text: mimarks-survey

characteristic: investigation type

text: gametophyte

characteristic: life stage

text: plant metagenome

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

text: plant metagenome

text: pyrosequencing

characteristic: sequencing method

text: S. fallax microbiome (Austria, Styria, Rotmoos)

characteristic: title