characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF NOTTINGHAM

text: public

text: three-spined stickleback

text: Canada

text: British Columbia, Vancouver Island, Lake Sproat

text: Gasterosteus aculeatus

text: Gasterosteus aculeatus


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UNIVERSITY OF NOTTINGHAM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:UNIVERSITY OF NOTTINGHAM

characteristic: Submitter Id

characteristic: collection date

text: three-spined stickleback

characteristic: common name

text: Canada

characteristic: geographic location (country and/or sea)

text: British Columbia, Saltspring Island, Lake Stowell

characteristic: geographic location (region and locality)

characteristic: isolate

text: Gasterosteus aculeatus

characteristic: organism

text: Gasterosteus aculeatus

characteristic: title


characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF NOTTINGHAM

text: public

text: three-spined stickleback

text: Canada

text: British Columbia, Sechelt Peninsula, Lake Trout

text: Gasterosteus aculeatus

text: Gasterosteus aculeatus


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF NOTTINGHAM

text: public

text: three-spined stickleback

text: USA

text: Alaska, Kenai Peninsula: Lake Arness

text: Gasterosteus aculeatus

text: Gasterosteus aculeatus


characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF NOTTINGHAM

text: public

text: three-spined stickleback

text: USA

text: Alaska, Kenai Peninsula: Lake Arrow

text: Gasterosteus aculeatus

text: Gasterosteus aculeatus


characteristic: External Id

text: UNIVERSITY OF NOTTINGHAM

text: public

text: three-spined stickleback

text: USA

text: Alaska, Mat-Su Valley: Lake Barley

text: Gasterosteus aculeatus

text: Gasterosteus aculeatus


text: UNIVERSITY OF NOTTINGHAM

characteristic: INSDC center name

text: public

text: three-spined stickleback

text: USA

text: Alaska, Mat-Su Valley: Lake Bear Paw

text: Gasterosteus aculeatus

text: Gasterosteus aculeatus


text: UNIVERSITY OF NOTTINGHAM

characteristic: INSDC first public

text: public

text: three-spined stickleback

text: USA

text: Alaska, Mat-Su Valley: Lake Big

text: Gasterosteus aculeatus

text: Gasterosteus aculeatus


text: UNIVERSITY OF NOTTINGHAM

characteristic: INSDC last update

text: public

text: three-spined stickleback

text: USA

text: Alaska, Mat-Su Valley: Lake Bruce

text: Gasterosteus aculeatus

text: Gasterosteus aculeatus


text: UNIVERSITY OF NOTTINGHAM

text: public

characteristic: INSDC status

text: three-spined stickleback

text: USA

text: Alaska, Kenai Peninsula: Lake Community

text: Gasterosteus aculeatus

text: Gasterosteus aculeatus


text: UNIVERSITY OF NOTTINGHAM

text: public

characteristic: SRA accession

text: three-spined stickleback

text: USA

text: Alaska, Mat-Su Valley: Lake Corcoran

text: Gasterosteus aculeatus

text: Gasterosteus aculeatus


text: UNIVERSITY OF NOTTINGHAM

text: public

characteristic: Submitter Id

text: three-spined stickleback

text: USA

text: Alaska, Kenai Peninsula: Daniels Lake

text: Gasterosteus aculeatus

text: Gasterosteus aculeatus


text: UNIVERSITY OF NOTTINGHAM

text: public

characteristic: collection date

text: three-spined stickleback

text: USA

text: Alaska, Kenai Peninsula: Lake Duck

text: Gasterosteus aculeatus

text: Gasterosteus aculeatus


text: UNIVERSITY OF NOTTINGHAM

text: public

text: three-spined stickleback

characteristic: common name

text: USA

text: Alaska, Mat-Su Valley: Lake Jade

text: Gasterosteus aculeatus

text: Gasterosteus aculeatus


text: UNIVERSITY OF NOTTINGHAM

text: public

text: three-spined stickleback

text: USA

characteristic: geographic location (country and/or sea)

text: Alaska, Mat-Su Valley: Lake Long

text: Gasterosteus aculeatus

text: Gasterosteus aculeatus


text: UNIVERSITY OF NOTTINGHAM

text: public

text: three-spined stickleback

text: USA

text: Alaska, Mat-Su Valley: Lake Lucille

characteristic: geographic location (region and locality)

text: Gasterosteus aculeatus

text: Gasterosteus aculeatus


text: UNIVERSITY OF NOTTINGHAM

text: public

text: three-spined stickleback

text: USA

text: Alaska, Mat-Su Valley: Lake Lynda

characteristic: isolate

text: Gasterosteus aculeatus

text: Gasterosteus aculeatus


text: UNIVERSITY OF NOTTINGHAM

text: public

text: three-spined stickleback

text: USA

text: Alaska, Mat-Su Valley: Lake Seymour

text: Gasterosteus aculeatus

characteristic: organism

text: Gasterosteus aculeatus


text: UNIVERSITY OF NOTTINGHAM

text: public

text: three-spined stickleback

text: USA

text: Alaska, Kenai Peninsula: Lake Tern

text: Gasterosteus aculeatus

text: Gasterosteus aculeatus

characteristic: title


characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF NOTTINGHAM

text: public

text: three-spined stickleback

text: USA

text: Alaska, Mat-Su Valley: Lake Toad

text: Gasterosteus aculeatus

text: Gasterosteus aculeatus


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF NOTTINGHAM

text: public

text: three-spined stickleback

text: USA

text: Alaska, Mat-Su Valley: Lake Walby

text: Gasterosteus aculeatus

text: Gasterosteus aculeatus


characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF NOTTINGHAM

text: public

text: three-spined stickleback

text: USA

text: Alaska, Mat-Su Valley: Lake Y

text: Gasterosteus aculeatus

text: Gasterosteus aculeatus


characteristic: External Id

text: INSTITUT DE GENETIQUE ET MICROBIOLOGIE

text: public

tag: Namespace:INSTITUT DE GENETIQUE ET MICROBIOLOGIE

text: wastewater sample collected on november 1st 2016

characteristic: description

text: France

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: Orsay, France

characteristic: name of the sampling site

text: metagenome

text: metagenome

text: wastewater, sewage in

characteristic: sewage type


ICMP 18942

text: MURDOCH UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ICMP 18942

tag: Namespace:MURDOCH UNIVERSITY

characteristic: Submitter Id

text: Mesorhizobium sp. ICMP 18942

text: Mesorhizobium sp. ICMP 18942

text: Mesorhizobium carmichaelineae


Acetobacterium bakii genome

text: public

text: Acetobacterium bakii genome

tag: Namespace:Korea Advanced Institute of Science and technology

text: Acetobacterium bakii

characteristic: organism

text: Acetobacterium bakii

text: Acetobacterium bakii genome

characteristic: title


text: whole organism

text: egg-laying adult

text: no

characteristic: ArrayExpress-IMMUNOPRECIPITATE

text: whole organism

text: wild type

characteristic: ArrayExpress-PHENOTYPE

text: hermaphrodite

characteristic: ArrayExpress-SEX

text: Caenorhabditis elegans

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: Caenorhabditis elegans

characteristic: common name

text: Hermaphrodite

characteristic: gender

text: Caenorhabditis elegans

text: wild type

characteristic: phenotype

text: Caenorhabditis elegans

characteristic: subject id

text: Caenorhabditis elegans


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UNIVERSITY OF TARTU

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:UNIVERSITY OF TARTU

characteristic: collection date

text: peatland

characteristic: environment (biome)

text: peat soil

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: French Guiana

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: miscellaneous natural or artificial environment

characteristic: miscellaneous environmental package

text: soil metagenome

text: Microbial community structure in response to the drainage in a tropical peatland soil

characteristic: project name

text: soil metagenome

text: NextSeq 500 Illumina

characteristic: sequencing method


text: mus musculus

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: house mouse

characteristic: common name

text: Mus musculus

characteristic: organism

text: Mus musculus

text: EB real d2 clone 48

characteristic: title


text: mus musculus

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

characteristic: subject id

text: EB real d2 clone 37


text: mus musculus

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: EB real d2 clone 43


text: mus musculus

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: EB real d2 clone 58


text: mus musculus

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: EB real d4 clone 37


text: mus musculus

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: EB real d4 clone 43


text: mus musculus

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: EB real d9 clone 58


text: mus musculus

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: EB real d9 clone 48


text: mus musculus

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: EB real d4 clone 48


text: mus musculus

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: EB real d9 clone 43


text: mus musculus

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: EB real d4 clone 58


text: mus musculus

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: EB real d9 clone 37


text: mouse NS cells

text: male

characteristic: ArrayExpress-SEX

text: Mus musculus

text: NS

text: SC

text: public

text: house mouse

text: Male

characteristic: gender

text: Mus musculus

text: Mus musculus


text: Chlamydia pecorum

characteristic: ArrayExpress-SPECIES

text: SC

text: public

text: Chlamydia pecorum

text: Chlamydia pecorum

text: Chlamydia pecorum


characteristic: ENA-CHECKLIST

text: IMPERIAL COLLEGE

text: public

tag: Namespace:IMPERIAL COLLEGE

text: human

text: Homo sapiens

text: Homo sapiens

text: Patient sample


characteristic: ENA-LAST-UPDATE

text: DALHOUSIE UNIVERSITY

text: public

tag: Namespace:DALHOUSIE UNIVERSITY

text: Control

characteristic: disease state

text: human gut metagenome

text: human gut metagenome

text: Human gut biopsy sample microbiome

text: Control

characteristic: treatment response

type: has member


text: DALHOUSIE UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Crohn's disease

text: human gut metagenome

text: human gut metagenome

text: Human gut biopsy sample microbiome

text: Non-responder


text: DALHOUSIE UNIVERSITY

text: public

characteristic: Submitter Id

text: Crohn's disease

text: human gut metagenome

characteristic: organism

text: human gut metagenome

text: Human gut biopsy sample microbiome

text: Responder


characteristic: ENA-FIRST-PUBLIC

text: Department of Surgery

text: public

tag: Namespace:Department of Surgery

characteristic: collection date

characteristic: description

text: city

characteristic: environment (biome)

text: turf-grass

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

unit: m

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: uncultured bacterium

text: Bacterial diversity associated with population density

characteristic: project name

text: uncultured bacterium

text: Miseq

characteristic: sequencing method

text: soil

characteristic: soil environmental package

characteristic: title


ssRNA-seq, 20'C Heterotrophic growth -1

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Korea Advanced Institute of Science and technology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ssRNA-seq, 20'C Heterotrophic growth -1

characteristic: Submitter Id

text: Acetobacterium bakii

characteristic: organism

text: Acetobacterium bakii

text: ssRNA-seq data


ssRNA-seq, 20'C Heterotrophic growth -2

characteristic: ENA-FIRST-PUBLIC

text: public

text: ssRNA-seq, 20'C Heterotrophic growth -2

text: Acetobacterium bakii

text: Acetobacterium bakii

text: ssRNA-seq data


ssRNA-seq, 20'C Autotrophic growth -1

text: public

text: ssRNA-seq, 20'C Autotrophic growth -1

text: Acetobacterium bakii

text: Acetobacterium bakii

text: ssRNA-seq data


ssRNA-seq, 20'C Autotrophic growth -2

text: public

text: ssRNA-seq, 20'C Autotrophic growth -2

text: Acetobacterium bakii

text: Acetobacterium bakii

text: ssRNA-seq data


ssRNA-seq, 10'C Heterotrophic growth -1

text: public

text: ssRNA-seq, 10'C Heterotrophic growth -1

text: Acetobacterium bakii

text: Acetobacterium bakii

text: ssRNA-seq data


ssRNA-seq, 10'C Heterotrophic growth -2

text: public

text: ssRNA-seq, 10'C Heterotrophic growth -2

text: Acetobacterium bakii

text: Acetobacterium bakii

text: ssRNA-seq data


ssRNA-seq, 10'C Autotrophic growth -1

text: public

text: ssRNA-seq, 10'C Autotrophic growth -1

text: Acetobacterium bakii

text: Acetobacterium bakii

text: ssRNA-seq data


ssRNA-seq, 10'C Autotrophic growth -2

text: public

text: ssRNA-seq, 10'C Autotrophic growth -2

text: Acetobacterium bakii

text: Acetobacterium bakii

text: ssRNA-seq data


20'C Heterotrophic growth-1_RPP

text: public

text: 20'C Heterotrophic growth-1_RPP

text: Acetobacterium bakii

text: Acetobacterium bakii

text: dRNA-seq data


20'C Heterotrophic growth-1_N

text: public

text: 20'C Heterotrophic growth-1_N

text: Acetobacterium bakii

text: Acetobacterium bakii

text: dRNA-seq data


20'C Heterotrophic growth-2_RPP

text: public

text: 20'C Heterotrophic growth-2_RPP

text: Acetobacterium bakii

text: Acetobacterium bakii

text: dRNA-seq data


20'C Heterotrophic growth-2_N

text: public

text: 20'C Heterotrophic growth-2_N

text: Acetobacterium bakii

text: Acetobacterium bakii

text: dRNA-seq data


20'C Autotrophic growth-1_RPP

text: public

text: 20'C Autotrophic growth-1_RPP

text: Acetobacterium bakii

text: Acetobacterium bakii

text: dRNA-seq data


20'C Autotrophic growth-1_N

text: public

text: 20'C Autotrophic growth-1_N

text: Acetobacterium bakii

text: Acetobacterium bakii

text: dRNA-seq data


20'C Autotrophic growth-2_RPP

text: public

text: 20'C Autotrophic growth-2_RPP

text: Acetobacterium bakii

text: Acetobacterium bakii

text: dRNA-seq data


20'C Autotrophic growth-2_N

text: public

text: 20'C Autotrophic growth-2_N

text: Acetobacterium bakii

text: Acetobacterium bakii

text: dRNA-seq data


10'C Heterotrophic growth-1_RPP

text: public

text: 10'C Heterotrophic growth-1_RPP

text: Acetobacterium bakii

text: Acetobacterium bakii

text: dRNA-seq data


10'C Heterotrophic growth-1_N

text: public

text: 10'C Heterotrophic growth-1_N

text: Acetobacterium bakii

text: Acetobacterium bakii

text: dRNA-seq data


10'C Heterotrophic growth-2_RPP

text: public

text: 10'C Heterotrophic growth-2_RPP

text: Acetobacterium bakii

text: Acetobacterium bakii

text: dRNA-seq data


10'C Heterotrophic growth-2_N

text: public

text: 10'C Heterotrophic growth-2_N

text: Acetobacterium bakii

text: Acetobacterium bakii

text: dRNA-seq data


10'C Autotrophic growth-1_RPP

text: public

text: 10'C Autotrophic growth-1_RPP

text: Acetobacterium bakii

text: Acetobacterium bakii

text: dRNA-seq data


10'C Autotrophic growth-1_N

text: public

text: 10'C Autotrophic growth-1_N

text: Acetobacterium bakii

text: Acetobacterium bakii

text: dRNA-seq data


10'C Autotrophic growth-2_RPP

text: public

text: 10'C Autotrophic growth-2_RPP

text: Acetobacterium bakii

text: Acetobacterium bakii

text: dRNA-seq data


10'C Autotrophic growth-2_N

text: public

text: 10'C Autotrophic growth-2_N

text: Acetobacterium bakii

text: Acetobacterium bakii

text: dRNA-seq data


text: Plasmodium ovale

characteristic: ArrayExpress-SPECIES

text: SC

text: public

text: malaria parasite P. ovale

characteristic: common name

text: Plasmodium ovale

text: Plasmodium ovale

characteristic: subject id


text: Plasmodium malariae

text: SC

text: public

text: Plasmodium malariae

text: Plasmodium malariae

text: Plasmodium malariae


text: Plasmodium relictum

text: SC

text: public

text: Plasmodium relictum

text: Plasmodium relictum

text: Plasmodium relictum


text: SSI

text: public

text: DNK

text: SSI

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Escherichia

characteristic: genus

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Homo sapiens

characteristic: host

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Escherichia coli

text: VTEC

characteristic: pathotype

text: Escherichia coli

text: Orough:H-

characteristic: serovar

characteristic: strain

text: Danish VTEC AMR

type: AMR curated data - CABBAGE

value: chloramphenicol

value: EUCAST

value: broth dilution

value: mg/L

value: susceptible

value: Escherichia coli

value: trimethoprim

value: cefotaxime

value: nalidixic acid

value: ampicillin

value: ceftazidime

value: sulfamethoxazole

value: tigecycline

value: gentamicin

value: azithromycin


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

text: No

text: Escherichia

text: Denmark

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

text: Escherichia coli

characteristic: organism

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

characteristic: title

value: tetracycline

value: colistin

value: resistant

value: ciprofloxacin

value: meropenem


text: SSI

text: public

text: DNK

text: SSI

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Escherichia

characteristic: genus

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Homo sapiens

characteristic: host

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Escherichia coli

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

value: EUCAST

value: broth dilution

value: mg/L


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: DNK

text: SSI

text: No

text: Escherichia

text: Denmark

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

characteristic: isolate

text: Escherichia coli

text: VTEC

characteristic: pathotype

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: Danish VTEC AMR

value: susceptible

value: Escherichia coli

value: chloramphenicol

value: trimethoprim


text: SSI

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Escherichia

characteristic: genus

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

text: Escherichia coli

characteristic: organism

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

characteristic: title

value: cefotaxime

value: ceftazidime

value: nalidixic acid


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

text: Escherichia

text: Denmark

characteristic: geographic location (longitude)

text: Homo sapiens

characteristic: host

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Escherichia coli

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

value: ampicillin

value: tigecycline


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Escherichia

text: Denmark

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

characteristic: isolate

text: Escherichia coli

text: VTEC

characteristic: pathotype

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: Danish VTEC AMR

value: sulfamethoxazole

value: azithromycin


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

text: Escherichia

characteristic: genus

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

text: Escherichia coli

characteristic: organism

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

characteristic: title

value: gentamicin

value: colistin


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

text: Escherichia

text: Denmark

characteristic: geographic location (longitude)

text: Homo sapiens

characteristic: host

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Escherichia coli

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

value: ciprofloxacin

value: resistant

value: tetracycline


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

characteristic: environmental sample

text: Escherichia

text: Denmark

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

characteristic: isolate

text: Escherichia coli

text: VTEC

characteristic: pathotype

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: Danish VTEC AMR

value: EUCAST

value: broth dilution

value: mg/L

value: meropenem


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

text: Escherichia

characteristic: genus

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

text: Escherichia coli

characteristic: organism

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

characteristic: title

value: susceptible

value: Escherichia coli

value: trimethoprim


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

text: Escherichia

text: Denmark

characteristic: geographic location (longitude)

text: Homo sapiens

characteristic: host

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Escherichia coli

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

value: chloramphenicol

value: cefotaxime

value: ceftazidime


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Escherichia

text: Denmark

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

characteristic: isolate

text: Escherichia coli

text: VTEC

characteristic: pathotype

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: Danish VTEC AMR

value: tigecycline

value: ampicillin


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

text: Escherichia

characteristic: genus

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

text: Escherichia coli

characteristic: organism

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

characteristic: title

value: nalidixic acid

value: azithromycin


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

text: Escherichia

text: Denmark

characteristic: geographic location (longitude)

text: Homo sapiens

characteristic: host

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Escherichia coli

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

value: ciprofloxacin

value: gentamicin

value: sulfamethoxazole

value: colistin


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

characteristic: environmental sample

text: Escherichia

text: Denmark

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

characteristic: isolate

text: Escherichia coli

text: VTEC

characteristic: pathotype

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: Danish VTEC AMR

value: EUCAST

value: broth dilution

value: tetracycline

value: resistant


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

text: Escherichia

characteristic: genus

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

text: Escherichia coli

characteristic: organism

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

characteristic: title

value: mg/L

value: susceptible

value: Escherichia coli


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

text: Escherichia

text: Denmark

characteristic: geographic location (longitude)

text: Homo sapiens

characteristic: host

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Escherichia coli

text: VTEC

text: Escherichia coli

text: Orough:H-

text: Danish VTEC AMR

value: meropenem

value: trimethoprim

value: chloramphenicol


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Escherichia

text: Denmark

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

characteristic: isolate

text: Escherichia coli

text: VTEC

characteristic: pathotype

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: Danish VTEC AMR

value: ampicillin

value: tigecycline

value: cefotaxime


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

text: Escherichia

characteristic: genus

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

text: Escherichia coli

characteristic: organism

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

characteristic: title

value: ceftazidime

value: nalidixic acid

value: azithromycin

value: ciprofloxacin


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

text: Escherichia

text: Denmark

characteristic: geographic location (longitude)

text: Homo sapiens

characteristic: host

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Escherichia coli

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

value: EUCAST

value: gentamicin

value: sulfamethoxazole

value: colistin


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

characteristic: environmental sample

text: Escherichia

text: Denmark

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

characteristic: isolate

text: Escherichia coli

text: VTEC

characteristic: pathotype

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: Danish VTEC AMR

value: broth dilution

value: mg/L

value: tetracycline


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

text: Escherichia

characteristic: genus

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

text: Escherichia coli

characteristic: organism

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

characteristic: title

value: susceptible

value: Escherichia coli


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

text: Escherichia

text: Denmark

characteristic: geographic location (longitude)

text: Homo sapiens

characteristic: host

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Escherichia coli

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

value: meropenem

value: trimethoprim

value: chloramphenicol


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Escherichia

text: Denmark

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

characteristic: isolate

text: Escherichia coli

text: VTEC

characteristic: pathotype

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: Danish VTEC AMR

value: cefotaxime

value: tigecycline

value: ampicillin


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

text: Escherichia

characteristic: genus

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

text: Escherichia coli

characteristic: organism

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

characteristic: title

value: azithromycin

value: ceftazidime

value: nalidixic acid


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

text: Escherichia

text: Denmark

characteristic: geographic location (longitude)

text: Homo sapiens

characteristic: host

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Escherichia coli

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

value: EUCAST


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

characteristic: environmental sample

text: Escherichia

text: Denmark

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

characteristic: isolate

text: Escherichia coli

text: VTEC

characteristic: pathotype

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: Danish VTEC AMR

value: ciprofloxacin

value: gentamicin

value: resistant


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

text: Escherichia

characteristic: genus

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

text: Escherichia coli

characteristic: organism

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

characteristic: title

value: broth dilution

value: mg/L

value: colistin

value: sulfamethoxazole


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

text: Escherichia

text: Denmark

characteristic: geographic location (longitude)

text: Homo sapiens

characteristic: host

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Escherichia coli

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

value: susceptible

value: Escherichia coli

value: meropenem


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Escherichia

text: Denmark

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

characteristic: isolate

text: Escherichia coli

text: VTEC

characteristic: pathotype

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: Danish VTEC AMR

value: chloramphenicol

value: tetracycline

value: cefotaxime


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

text: Escherichia

characteristic: genus

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

text: Escherichia coli

characteristic: organism

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

characteristic: title

value: azithromycin

value: ampicillin

value: tigecycline

value: trimethoprim


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

text: Escherichia

text: Denmark

characteristic: geographic location (longitude)

text: Homo sapiens

characteristic: host

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Escherichia coli

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

value: ceftazidime

value: EUCAST

value: nalidixic acid


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

characteristic: environmental sample

text: Escherichia

text: Denmark

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

characteristic: isolate

text: Escherichia coli

text: VTEC

characteristic: pathotype

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: Danish VTEC AMR

value: broth dilution

value: ciprofloxacin


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

text: Escherichia

characteristic: genus

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

text: Escherichia coli

characteristic: organism

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

characteristic: title

value: mg/L

value: gentamicin

value: colistin


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

text: Escherichia

text: Denmark

characteristic: geographic location (longitude)

text: Homo sapiens

characteristic: host

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Escherichia coli

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

value: susceptible

value: Escherichia coli

value: sulfamethoxazole

value: resistant


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Escherichia

text: Denmark

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

characteristic: isolate

text: Escherichia coli

text: VTEC

characteristic: pathotype

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: Danish VTEC AMR

value: tetracycline

value: chloramphenicol

value: cefotaxime


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

text: Escherichia

characteristic: genus

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

text: Escherichia coli

characteristic: organism

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

characteristic: title

value: meropenem

value: azithromycin

value: tigecycline


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

text: Escherichia

text: Denmark

characteristic: geographic location (longitude)

text: Homo sapiens

characteristic: host

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Escherichia coli

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

value: EUCAST

value: ampicillin

value: ceftazidime


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

characteristic: environmental sample

text: Escherichia

text: Denmark

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

characteristic: isolate

text: Escherichia coli

text: VTEC

characteristic: pathotype

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: Danish VTEC AMR

value: broth dilution

value: nalidixic acid

value: trimethoprim

value: ciprofloxacin


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

text: Escherichia

characteristic: genus

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

text: Escherichia coli

characteristic: organism

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

characteristic: title

value: mg/L

value: susceptible

value: gentamicin


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

text: Escherichia

text: Denmark

characteristic: geographic location (longitude)

text: Homo sapiens

characteristic: host

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Escherichia coli

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

value: Escherichia coli

value: colistin

value: sulfamethoxazole


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Escherichia

text: Denmark

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

characteristic: isolate

text: Escherichia coli

text: VTEC

characteristic: pathotype

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: Danish VTEC AMR

value: cefotaxime

value: tetracycline


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

text: Escherichia

characteristic: genus

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

text: Escherichia coli

characteristic: organism

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

characteristic: title

value: azithromycin

value: resistant


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

text: Escherichia

text: Denmark

characteristic: geographic location (longitude)

text: Homo sapiens

characteristic: host

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Escherichia coli

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

value: EUCAST

value: tigecycline


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

characteristic: environmental sample

text: Escherichia

text: Denmark

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

characteristic: isolate

text: Escherichia coli

text: VTEC

characteristic: pathotype

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: Danish VTEC AMR

value: chloramphenicol

value: ceftazidime

value: ampicillin


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

text: Escherichia

characteristic: genus

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

text: Escherichia coli

characteristic: organism

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

characteristic: title

value: broth dilution

value: nalidixic acid

value: meropenem

value: trimethoprim


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

text: Escherichia

text: Denmark

characteristic: geographic location (longitude)

text: Homo sapiens

characteristic: host

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Escherichia coli

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

value: mg/L

value: susceptible

value: gentamicin

value: ciprofloxacin


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Escherichia

text: Denmark

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

characteristic: isolate

text: Escherichia coli

text: VTEC

characteristic: pathotype

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: Danish VTEC AMR

value: Escherichia coli

value: colistin

value: cefotaxime

value: sulfamethoxazole


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

text: Escherichia

characteristic: genus

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

text: Escherichia coli

characteristic: organism

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

characteristic: title

value: EUCAST

value: azithromycin

value: tetracycline


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

text: Escherichia

text: Denmark

characteristic: geographic location (longitude)

text: Homo sapiens

characteristic: host

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Escherichia coli

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

value: ceftazidime


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

characteristic: environmental sample

text: Escherichia

text: Denmark

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

characteristic: isolate

text: Escherichia coli

text: VTEC

characteristic: pathotype

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: Danish VTEC AMR

value: tigecycline


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

text: Escherichia

characteristic: genus

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

text: Escherichia coli

characteristic: organism

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

characteristic: title

value: broth dilution

value: ampicillin

value: chloramphenicol


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

text: Escherichia

text: Denmark

characteristic: geographic location (longitude)

text: Homo sapiens

characteristic: host

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Escherichia coli

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

value: meropenem

value: resistant


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Escherichia

text: Denmark

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

characteristic: isolate

text: Escherichia coli

text: VTEC

characteristic: pathotype

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: Danish VTEC AMR

value: mg/L

value: susceptible

value: trimethoprim

value: nalidixic acid


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

text: Escherichia

characteristic: genus

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

text: Escherichia coli

characteristic: organism

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

characteristic: title

value: Escherichia coli

value: colistin

value: ciprofloxacin

value: gentamicin


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

text: Escherichia

text: Denmark

characteristic: geographic location (longitude)

text: Homo sapiens

characteristic: host

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Escherichia coli

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

value: EUCAST

value: cefotaxime

value: azithromycin


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

characteristic: environmental sample

text: Escherichia

text: Denmark

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

characteristic: isolate

text: Escherichia coli

text: VTEC

characteristic: pathotype

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: Danish VTEC AMR

value: tigecycline

value: ceftazidime

value: tetracycline

value: sulfamethoxazole


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

text: Escherichia

characteristic: genus

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

text: Escherichia coli

characteristic: organism

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

characteristic: title

value: broth dilution

value: ampicillin

value: chloramphenicol

value: meropenem


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

text: Escherichia

text: Denmark

characteristic: geographic location (longitude)

text: Homo sapiens

characteristic: host

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Escherichia coli

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

value: mg/L

value: susceptible

value: resistant

value: trimethoprim


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Escherichia

text: Denmark

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

characteristic: isolate

text: Escherichia coli

text: VTEC

characteristic: pathotype

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: Danish VTEC AMR

value: Escherichia coli

value: ciprofloxacin


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

text: Escherichia

characteristic: genus

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

text: Escherichia coli

characteristic: organism

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

characteristic: title

value: EUCAST

value: colistin

value: nalidixic acid


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

text: Escherichia

text: Denmark

characteristic: geographic location (longitude)

text: Homo sapiens

characteristic: host

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Escherichia coli

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

value: gentamicin

value: tigecycline

value: azithromycin


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

characteristic: environmental sample

text: Escherichia

text: Denmark

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

characteristic: isolate

text: Escherichia coli

text: VTEC

characteristic: pathotype

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: Danish VTEC AMR

value: ceftazidime

value: cefotaxime

value: sulfamethoxazole


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

text: Escherichia

characteristic: genus

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

text: Escherichia coli

characteristic: organism

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

characteristic: title

value: broth dilution

value: tetracycline

value: ampicillin


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

text: Escherichia

text: Denmark

characteristic: geographic location (longitude)

text: Homo sapiens

characteristic: host

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Escherichia coli

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

value: mg/L

value: susceptible

value: meropenem


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Escherichia

text: Denmark

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

characteristic: isolate

text: Escherichia coli

text: VTEC

characteristic: pathotype

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: Danish VTEC AMR

value: Escherichia coli

value: chloramphenicol

value: trimethoprim


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

text: Escherichia

characteristic: genus

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

text: Escherichia coli

characteristic: organism

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

characteristic: title

value: EUCAST

value: ciprofloxacin


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

text: Escherichia

text: Denmark

characteristic: geographic location (longitude)

text: Homo sapiens

characteristic: host

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Escherichia coli

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

value: gentamicin

value: colistin


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

characteristic: environmental sample

text: Escherichia

text: Denmark

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

characteristic: isolate

text: Escherichia coli

text: VTEC

characteristic: pathotype

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: Danish VTEC AMR

value: nalidixic acid

value: azithromycin

value: tigecycline


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

text: Escherichia

characteristic: genus

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

text: Escherichia coli

characteristic: organism

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

characteristic: title

value: cefotaxime

value: ceftazidime


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

text: Escherichia

text: Denmark

characteristic: geographic location (longitude)

text: Homo sapiens

characteristic: host

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Escherichia coli

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

value: broth dilution

value: tetracycline


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Escherichia

text: Denmark

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

characteristic: isolate

text: Escherichia coli

text: VTEC

characteristic: pathotype

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: Danish VTEC AMR

value: mg/L

value: sulfamethoxazole

value: ampicillin


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

text: Escherichia

characteristic: genus

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

text: Escherichia coli

characteristic: organism

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

characteristic: title

value: susceptible

value: Escherichia coli

value: resistant

value: meropenem


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

text: Escherichia

text: Denmark

characteristic: geographic location (longitude)

text: Homo sapiens

characteristic: host

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Escherichia coli

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

value: EUCAST

value: ciprofloxacin


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

characteristic: environmental sample

text: Escherichia

text: Denmark

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

characteristic: isolate

text: Escherichia coli

text: VTEC

characteristic: pathotype

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: Danish VTEC AMR

value: gentamicin


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

text: Escherichia

characteristic: genus

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

text: Escherichia coli

characteristic: organism

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

characteristic: title

value: chloramphenicol

value: nalidixic acid

value: trimethoprim


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

text: Escherichia

text: Denmark

characteristic: geographic location (longitude)

text: Homo sapiens

characteristic: host

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Escherichia coli

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

value: tigecycline


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Escherichia

text: Denmark

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

characteristic: isolate

text: Escherichia coli

text: VTEC

characteristic: pathotype

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: Danish VTEC AMR

value: colistin

value: azithromycin


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

text: Escherichia

characteristic: genus

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

text: Escherichia coli

characteristic: organism

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

characteristic: title

value: broth dilution


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

text: Escherichia

text: Denmark

characteristic: geographic location (longitude)

text: Homo sapiens

characteristic: host

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Escherichia coli

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

value: mg/L

value: tetracycline

value: ceftazidime

value: cefotaxime


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

characteristic: environmental sample

text: Escherichia

text: Denmark

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

characteristic: isolate

text: Escherichia coli

text: VTEC

characteristic: pathotype

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: Danish VTEC AMR

value: susceptible

value: Escherichia coli

value: sulfamethoxazole

value: ampicillin


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

text: Escherichia

characteristic: genus

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

text: Escherichia coli

characteristic: organism

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

characteristic: title

value: EUCAST

value: resistant

value: meropenem

value: ciprofloxacin


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

text: Escherichia

text: Denmark

characteristic: geographic location (longitude)

text: Homo sapiens

characteristic: host

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Escherichia coli

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

value: gentamicin

value: chloramphenicol

value: trimethoprim


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Escherichia

text: Denmark

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

characteristic: isolate

text: Escherichia coli

text: VTEC

characteristic: pathotype

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: Danish VTEC AMR

value: azithromycin

value: tigecycline

value: nalidixic acid

value: colistin


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

text: Escherichia

characteristic: genus

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

text: Escherichia coli

characteristic: organism

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

characteristic: title

value: broth dilution

value: mg/L

value: tetracycline


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

text: Escherichia

text: Denmark

characteristic: geographic location (longitude)

text: Homo sapiens

characteristic: host

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Escherichia coli

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

value: susceptible

value: Escherichia coli

value: cefotaxime

value: ceftazidime


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

characteristic: environmental sample

text: Escherichia

text: Denmark

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

characteristic: isolate

text: Escherichia coli

text: VTEC

characteristic: pathotype

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: Danish VTEC AMR

value: sulfamethoxazole

value: EUCAST

value: ampicillin


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

text: Escherichia

characteristic: genus

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

text: Escherichia coli

characteristic: organism

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

characteristic: title

value: meropenem


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

text: Escherichia

text: Denmark

characteristic: geographic location (longitude)

text: Homo sapiens

characteristic: host

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Escherichia coli

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

value: ciprofloxacin

value: chloramphenicol


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Escherichia

text: Denmark

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

characteristic: isolate

text: Escherichia coli

text: VTEC

characteristic: pathotype

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: Danish VTEC AMR

value: azithromycin

value: gentamicin


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

text: Escherichia

characteristic: genus

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

text: Escherichia coli

characteristic: organism

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

characteristic: title

value: tigecycline

value: nalidixic acid


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

text: Escherichia

text: Denmark

characteristic: geographic location (longitude)

text: Homo sapiens

characteristic: host

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Escherichia coli

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

value: broth dilution

value: colistin

value: trimethoprim


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

characteristic: environmental sample

text: Escherichia

text: Denmark

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

characteristic: isolate

text: Escherichia coli

text: VTEC

characteristic: pathotype

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: Danish VTEC AMR

value: mg/L

value: susceptible

value: tetracycline


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

text: Escherichia

characteristic: genus

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

text: Escherichia coli

characteristic: organism

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

characteristic: title

value: Escherichia coli

value: ceftazidime


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

text: Escherichia

text: Denmark

characteristic: geographic location (longitude)

text: Homo sapiens

characteristic: host

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Escherichia coli

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

value: EUCAST

value: resistant

value: sulfamethoxazole


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Escherichia

text: Denmark

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

characteristic: isolate

text: Escherichia coli

text: VTEC

characteristic: pathotype

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: Danish VTEC AMR

value: meropenem

value: cefotaxime

value: ciprofloxacin


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DNK

text: SSI

text: No

text: Escherichia

characteristic: genus

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Homo sapiens

text: not collected

text: Homo sapiens

text: Yes

text: Escherichia coli

characteristic: organism

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

characteristic: title

value: azithromycin

value: ampicillin

value: chloramphenicol


text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DNK

characteristic: SRA accession

characteristic: Submitter Id

text: SSI

characteristic: collected by

characteristic: collection date

text: No

text: Escherichia

text: Denmark

characteristic: geographic location (longitude)

text: Homo sapiens

characteristic: host

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Escherichia coli

text: VTEC

text: Escherichia coli

text: Danish VTEC AMR

value: broth dilution

value: nalidixic acid

value: tigecycline


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Scientific Insitute of Public Health

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:Scientific Insitute of Public Health

text: Belgium

text: Salmonella monophasic typhimurium

characteristic: isolate

text: Pork carcasses

characteristic: isolation source

text: Salmonella enterica subsp. enterica serovar Typhimurium var. monophasic 4,[5],12:i:-

text: Detection of plasmid mediated colistin resistance, mcr-1and mcr-2 genes, in Salmonella spp. isolated from food at retail in Belgium from 2012-2015


text: Scientific Insitute of Public Health

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Belgium

characteristic: geographic location (country and/or sea)

text: Salmonella Derby

text: Pork carcasses

text: Salmonella enterica subsp. enterica serovar Derby

characteristic: organism

characteristic: title


text: Scientific Insitute of Public Health

text: public

characteristic: Submitter Id

characteristic: collection date

text: Belgium

text: Salmonella autoagglutinable

text: Poultry meat

text: Salmonella enterica subsp. enterica

text: Salmonella enterica subsp. enterica


text: GUH

text: public

text: terrestrial biome

characteristic: environment (biome)

text: organic feature

characteristic: environment (feature)

text: organic material

characteristic: environment (material)

text: Switzerland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-associated

characteristic: human associated environmental package

text: metagenome

characteristic: investigation type

text: metagenome

text: Aortite

characteristic: project name

text: metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: Molzym


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: National Swine Fever Reference Center

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:National Swine Fever Reference Center

text: IZSUM

characteristic: collecting institution

text: M. Giammarioli

characteristic: collector name

text: We sequenced the complete genome of Bovine viral diarrhea virus (BVDV) strain MA/101/05. It belongs to the subgenotype 1e. The complete genome is 12225 nucleotides (nt); the open reading frame is 11694 nt, coding 3898 amino acids.

characteristic: description

text: Italy

text: Marche

characteristic: geographic location (region and locality)

text: Bos taurus

characteristic: host common name

text: diseased

characteristic: host health state

text: bos taurus

characteristic: host scientific name

text: female

characteristic: host sex

characteristic: host subject id

characteristic: isolate

text: Bovine viral diarrhea virus 1

text: Bovine viral diarrhea virus 1

text: Complete Genome Sequence of a Bovine Viral Diarrhea Virus Subgenotype 1e Strain MA/101/05 isolated in Italy


characteristic: ENA-CHECKLIST

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Key Laboratory of Environmental and Applied Microbiology, CAS

characteristic: Submitter Id

characteristic: collection date

text: pika

characteristic: environment (biome)

characteristic: environment (feature)

text: gut

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: gut metagenome

characteristic: organism

characteristic: project name

text: gut metagenome

text: MiSeq

characteristic: sequencing method

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Key Laboratory of Environmental and Applied Microbiology, CAS

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: pika

text: gut

text: China

text: host-associated

text: mimarks-survey

text: gut metagenome

text: gut metagenome

text: MiSeq


text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:IASMA RESEARCH CENTRE - FONDAZIONE EDMUND MACH

characteristic: Submitter Id

text: Bermuda grass

characteristic: common name

text: Shift and resilience dynamics in soil bacterial communities upon addition of different fertilizers

characteristic: description

text: Cynodon dactylon

text: Cynodon dactylon


text: IASMA RESEARCH CENTRE - FONDAZIONE EDMUND MACH

text: public

text: Bermuda grass

text: Assessing the response of microbial communities to nutrient inputs in man-managed soils is of primary importance in understanding elemental cycling in the environment as well as improving crop productivity. In this study a low-nutrient soil was supplemented with seven different fertilizers including matrixes of plant, animal, fungal or synthetic origin and dosed to deliver the same amount of nitrogen. Growth of a grass crop (Cynodon dactylon) was recorded and the fertilizers were scored by the plant yield obtained. Soil cores were sampled at 9 and 58 days after the addition and bacterial community composition was analyzed through pyrosequencing of 16S rRNA gene amplicons. Over 900 bacterial genera were detected, belonging to 21 described and 19 candidate phyla. Specific groups were fostered by given fertilizers, in particular marked effects on some phyla were displayed by a yeast-based fertilizer which was also most effective in plant productivity. The main shifts were observed shortly after the supplementation and followed by a gradual stabilization of the equilibria and by a rise in community evenness. In the two-month time a decrease in the abundances of Firmicutes and Bacteroidetes was observed in parallel to a rise of Acidobacteria, Actinobacteria and part of the Proteobacteria.

text: Cynodon dactylon

text: Cynodon dactylon


text: public

text: Bermuda grass

text: Cynodon dactylon

text: Cynodon dactylon


text: Fpertille

text: public

text: Red blood cells

characteristic: cell type

text: chicken

text: DNA methylation profiles in red blood cells of adult hens correlate to their previous rearing conditions

text: rearing in cages

characteristic: isolation source

text: Gallus gallus

text: Gallus gallus

text: Genotyping by Sequencing with the technique of Methylated DNA immunoprecipitation


text: Fpertille

text: public

text: Red blood cells

text: chicken

text: open aviaries

text: Gallus gallus

characteristic: organism

text: Gallus gallus


text: CGR

text: public

text: Calotropis procera

text: Calotropis procera

text: RNAseq data from leaves of C. procerra To study the plant response to drought and osmotic stress, we treated plants with polyethylene glycol or PEG and NaCl and carried out transcriptomic and metabolomics measurements across a time-course of five days.


text: IMPERIAL COLLEGE LONDON

text: public

tag: Namespace:IMPERIAL COLLEGE LONDON

characteristic: age (weeks)

characteristic: collection date

text: human gut 16S V4

characteristic: dose 1 rota shedding

text: ENVO:human-associated habitat

characteristic: environment (biome)

text: ENVO:human-associated habitat

characteristic: environment (feature)

text: ENVO:feces

characteristic: environment (material)

text: India

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: female

characteristic: host sex

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

characteristic: miseq run

text: human gut metagenome

characteristic: probiotic group

text: ZPS

characteristic: project name

characteristic: pv3 seroconversion

characteristic: rota seroconversion

text: human gut metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: C

characteristic: study arm

characteristic: zinc group


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IMPERIAL COLLEGE LONDON

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (weeks)

characteristic: collection date

text: human gut 16S V4

characteristic: description

characteristic: dose 1 rota shedding

text: ENVO:human-associated habitat

characteristic: environment (biome)

text: ENVO:human-associated habitat

characteristic: environment (feature)

text: ENVO:feces

text: India

text: female

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: organism

text: ZPS

text: human gut metagenome

text: Illumina MiSeq

text: D

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: IMPERIAL COLLEGE LONDON

text: public

text: human gut 16S V4

text: ENVO:human-associated habitat

text: ENVO:human-associated habitat

text: ENVO:feces

characteristic: environment (material)

text: India

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: male

characteristic: host sex

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

characteristic: miseq run

text: human gut metagenome

characteristic: probiotic group

text: ZPS

characteristic: project name

characteristic: pv3 seroconversion

characteristic: rota seroconversion

text: human gut metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: D

characteristic: study arm

characteristic: zinc group


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IMPERIAL COLLEGE LONDON

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (weeks)

characteristic: collection date

text: human gut 16S V4

characteristic: description

characteristic: dose 1 rota shedding

text: ENVO:human-associated habitat

characteristic: environment (biome)

text: ENVO:human-associated habitat

characteristic: environment (feature)

text: ENVO:feces

text: India

text: male

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: organism

text: ZPS

text: human gut metagenome

text: Illumina MiSeq

text: C

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: IMPERIAL COLLEGE LONDON

text: public

text: human gut 16S V4

text: ENVO:human-associated habitat

text: ENVO:human-associated habitat

text: ENVO:feces

characteristic: environment (material)

text: India

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: male

characteristic: host sex

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

characteristic: miseq run

text: human gut metagenome

characteristic: probiotic group

text: ZPS

characteristic: project name

characteristic: pv3 seroconversion

characteristic: rota seroconversion

text: human gut metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: A

characteristic: study arm

characteristic: zinc group


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IMPERIAL COLLEGE LONDON

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (weeks)

characteristic: collection date

text: human gut 16S V4

characteristic: description

characteristic: dose 1 rota shedding

text: ENVO:human-associated habitat

characteristic: environment (biome)

text: ENVO:human-associated habitat

characteristic: environment (feature)

text: ENVO:feces

text: India

text: female

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: organism

text: ZPS

text: human gut metagenome

text: Illumina MiSeq

text: A

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: IMPERIAL COLLEGE LONDON

text: public

text: human gut 16S V4

text: ENVO:human-associated habitat

text: ENVO:human-associated habitat

text: ENVO:feces

characteristic: environment (material)

text: India

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: female

characteristic: host sex

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

characteristic: miseq run

text: human gut metagenome

characteristic: probiotic group

text: ZPS

characteristic: project name

characteristic: pv3 seroconversion

characteristic: rota seroconversion

text: human gut metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: C

characteristic: study arm

characteristic: zinc group


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IMPERIAL COLLEGE LONDON

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (weeks)

characteristic: collection date

text: human gut 16S V4

characteristic: description

text: ENVO:human-associated habitat

characteristic: environment (biome)

text: ENVO:human-associated habitat

characteristic: environment (feature)

text: ENVO:feces

text: India

text: female

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: organism

text: ZPS

text: human gut metagenome

text: Illumina MiSeq

text: D

characteristic: title