characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E17L.feces.42w.HFD.CD4HeMup.3.8

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 17

text: MupHe-HFD (10-11M)

text: HFD

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: D

characteristic: experiment group

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: normal

characteristic: immune status

text: adult

characteristic: life stage

text: Group 3-MupHe-HFD (10-11M)

characteristic: mice group

text: sample 37

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: NASH, obesity, HCC

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 11 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E17L.feces.42w.HFD.CD4HeMup.4.13

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 18

characteristic: cage

text: MupHe-HFD (10-11M)

characteristic: description

text: HFD

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: D

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: normal

characteristic: latitude

text: adult

characteristic: longitude

text: Group 3-MupHe-HFD (10-11M)

text: sample 38

text: mouse gut metagenome

text: NASH, obesity, HCC

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 11 months

text: Steatohepatitis progresses to cancer via immunosuppression of HCC directed by CD8+Tcells

text: grams

type: has member


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E17L.feces.43w.ANB.HFD.IgAkMup.1.14

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: Yes (Ampicillin, Vancomycin, Neomycin sulfate and Metronidazole )

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 169

text: Antibiotic-IgAkMup-HFD (10-11M)

text: HFD

characteristic: diet

text: not yet

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: D

characteristic: experiment group

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: no IgA - some susceptibility

characteristic: immune status

text: adult

characteristic: life stage

text: Group61-Antibiotic-IgAkMup-HFD (10-11M)

characteristic: mice group

text: sample 440

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: NASH, obesity, HCC, no IgA, ABX

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 11 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E17L.feces.44w.HFD.CD4HeMup.1.4

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 16

characteristic: cage

text: MupHe-HFD (10-11M)

characteristic: description

text: HFD

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: D

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: normal

characteristic: latitude

text: adult

characteristic: longitude

text: Group 3-MupHe-HFD (10-11M)

text: sample 35

text: mouse gut metagenome

text: NASH, obesity, HCC

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 11 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E17L.feces.44w.HFD.CD4HeMup.2.5

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 16

text: MupHe-HFD (10-11M)

text: HFD

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: D

characteristic: experiment group

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: normal

characteristic: immune status

text: adult

characteristic: life stage

text: Group 3-MupHe-HFD (10-11M)

characteristic: mice group

text: sample 36

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: NASH, obesity, HCC

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 11 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E18L.feces.23w.NC.IgAkMup.3.27

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 52

characteristic: cage

text: IgAkMup-NC (6M)

characteristic: description

text: NC

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: C

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: no IgA - some susceptibility

characteristic: latitude

text: adult

characteristic: longitude

text: Group 10-IgAkMup-NC (6M)

text: sample 105

text: mouse gut metagenome

text: NASH, no IgA

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 6 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E18L.feces.23w.NC.IgAkMup.4.28

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 52

text: IgAkMup-NC (6M)

text: NC

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: C

characteristic: experiment group

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: no IgA - some susceptibility

characteristic: immune status

text: adult

characteristic: life stage

text: Group 10-IgAkMup-NC (6M)

characteristic: mice group

text: sample 106

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: NASH, no IgA

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 6 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E18L.feces.23w.NC.IgAkMup.5.29

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 80

characteristic: cage

text: IgAk-NC (6M)

characteristic: description

text: NC

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: A

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: no IgA - some susceptibility

characteristic: latitude

text: adult

characteristic: longitude

text: Group14-IgAk-NC (6M)

text: sample 152

text: mouse gut metagenome

text: no IgA

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 6 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E18L.feces.25w.NC.IgAkCLM.5.26

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 52

text: IgAkMup-NC (6M)

text: NC

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: C

characteristic: experiment group

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: no IgA - some susceptibility

characteristic: immune status

text: adult

characteristic: life stage

text: Group 10-IgAkMup-NC (6M)

characteristic: mice group

text: sample 104

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: NASH, no IgA

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 6 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E18L.feces.25w.NC.IgAkMup.1.24

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 51

characteristic: cage

text: IgAkMup-NC (6M)

characteristic: description

text: NC

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: C

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: no IgA - some susceptibility

characteristic: latitude

text: adult

characteristic: longitude

text: Group 10-IgAkMup-NC (6M)

text: sample 103

text: mouse gut metagenome

text: NASH, no IgA

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 6 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E18L.feces.25w.NC.IgAkMup.2.25

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 79

text: IgAk-NC (6M)

text: NC

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: A

characteristic: experiment group

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: no IgA - some susceptibility

characteristic: immune status

text: adult

characteristic: life stage

text: Group14-IgAk-NC (6M)

characteristic: mice group

text: sample 151

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: no IgA

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 6 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E18L.feces.26w.HFD.IgAkCLM.1.18

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 77

characteristic: cage

text: IgAk-HFD (6M)

characteristic: description

text: HFD

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: B

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: no IgA - some susceptibility

characteristic: latitude

text: adult

characteristic: longitude

text: Group13-IgAk-HFD (6M)

text: sample 146

text: mouse gut metagenome

text: obese no IgA

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 6 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E18L.feces.26w.HFD.IgAkCLM.2.19

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 77

text: IgAk-HFD (6M)

text: HFD

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: B

characteristic: experiment group

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: no IgA - some susceptibility

characteristic: immune status

text: adult

characteristic: life stage

text: Group13-IgAk-HFD (6M)

characteristic: mice group

text: sample 147

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: obese no IgA

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 6 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E18L.feces.27w.NC.B6WT.1.30

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 37

characteristic: cage

text: B6-NC (6M)

characteristic: description

text: NC

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: A

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: normal

characteristic: latitude

text: adult

characteristic: longitude

text: Group 6-B6-NC (6M)

text: sample 73

text: mouse gut metagenome

text: lean

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 6 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E18L.feces.27w.NC.B6WT.2.31

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 37

text: B6-NC (6M)

text: NC

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: A

characteristic: experiment group

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: normal

characteristic: immune status

text: adult

characteristic: life stage

text: Group 6-B6-NC (6M)

characteristic: mice group

text: sample 74

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: lean

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 6 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E18L.feces.27w.NC.IgAkCLM.2.21

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 78

characteristic: cage

text: IgAk-NC (6M)

characteristic: description

text: NC

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: A

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: no IgA - some susceptibility

characteristic: latitude

text: adult

characteristic: longitude

text: Group14-IgAk-NC (6M)

text: sample 148

text: mouse gut metagenome

text: no IgA

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 6 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E18L.feces.27w.NC.IgAkCLM.3.22

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 78

text: IgAk-NC (6M)

text: NC

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: A

characteristic: experiment group

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: no IgA - some susceptibility

characteristic: immune status

text: adult

characteristic: life stage

text: Group14-IgAk-NC (6M)

characteristic: mice group

text: sample 149

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: no IgA

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 6 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E18L.feces.27w.NC.IgAkCLM.4.23

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 78

characteristic: cage

text: IgAk-NC (6M)

characteristic: description

text: NC

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: A

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: no IgA - some susceptibility

characteristic: latitude

text: adult

characteristic: longitude

text: Group14-IgAk-NC (6M)

text: sample 150

text: mouse gut metagenome

text: no IgA

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 6 months

text: Steatohepatitis progresses to cancer via immunosuppression of HCC directed by CD8+Tcells

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E18L.feces.51w.ANB.HFD.IgAkMup.2.5

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: Yes (Ampicillin, Vancomycin, Neomycin sulfate and Metronidazole )

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 170

text: Antibiotic-IgAkMup-HFD (10-11M)

text: HFD

characteristic: diet

text: not yet

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: D

characteristic: experiment group

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: no IgA - some susceptibility

characteristic: immune status

text: adult

characteristic: life stage

text: Group61-Antibiotic-IgAkMup-HFD (10-11M)

characteristic: mice group

text: sample 441

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: NASH, obesity, HCC, no IgA, ABX

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 11 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E18L.feces.51w.ANB.HFD.IgAkMup.3.7

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 171

characteristic: cage

text: Antibiotic-IgAkMup-HFD (10-11M)

characteristic: description

text: HFD

text: not yet

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: D

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: no IgA - some susceptibility

characteristic: latitude

text: adult

characteristic: longitude

text: Group61-Antibiotic-IgAkMup-HFD (10-11M)

text: sample 442

text: mouse gut metagenome

text: NASH, obesity, HCC, no IgA, ABX

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 11 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E18L.feces.51w.ANB.HFD.IgAkMup.4.8

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 171

text: Antibiotic-IgAkMup-HFD (10-11M)

text: HFD

characteristic: diet

text: not yet

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: D

characteristic: experiment group

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: no IgA - some susceptibility

characteristic: immune status

text: adult

characteristic: life stage

text: Group61-Antibiotic-IgAkMup-HFD (10-11M)

characteristic: mice group

text: sample 443

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: NASH, obesity, HCC, no IgA, ABX

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 11 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E18L.feces.51w.ANB.HFD.IgAkMup.5.9

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 171 (DP)

characteristic: cage

text: Antibiotic-IgAkMup-HFD (10-11M)

characteristic: description

text: HFD

text: not yet

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: D

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: no IgA - some susceptibility

characteristic: latitude

text: adult

characteristic: longitude

text: Group61-Antibiotic-IgAkMup-HFD (10-11M)

text: sample 444

text: mouse gut metagenome

text: NASH, obesity, HCC, no IgA, ABX

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 11 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E19L.feces.45w.HFD.CD8kCLM.1.6

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 97

text: CD8k-HFD (10-11M)

text: HFD

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: B

characteristic: experiment group

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: CD8KO - some susceptibility

characteristic: immune status

text: adult

characteristic: life stage

text: Group23-CD8k-HFD (10-11M)

characteristic: mice group

text: sample 248

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: obese, CD8KO

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 11 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E19L.feces.45w.HFD.CD8kMup.3.4

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 97

characteristic: cage

text: CD8kMup-HFD (10-11M)

characteristic: description

text: HFD

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: D

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: CD8KO - some susceptibility

characteristic: latitude

text: adult

characteristic: longitude

text: Group19-CD8kMup-HFD (10-11M)

text: sample 204

text: mouse gut metagenome

text: NASH, HCC, CD8KO

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 11 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E19L.feces.45w.HFD.CD8kMup.4.5

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 97

text: CD8kMup-HFD (10-11M)

text: HFD

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: D

characteristic: experiment group

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: CD8KO - some susceptibility

characteristic: immune status

text: adult

characteristic: life stage

text: Group19-CD8kMup-HFD (10-11M)

characteristic: mice group

text: sample 205

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: NASH, HCC, CD8KO

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 11 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E19L.feces.45w.HFD.CD8kMup.6.8

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 98

characteristic: cage

text: CD8kMup-HFD (10-11M)

characteristic: description

text: HFD

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: D

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: CD8KO - some susceptibility

characteristic: latitude

text: adult

characteristic: longitude

text: Group19-CD8kMup-HFD (10-11M)

text: sample 206

text: mouse gut metagenome

text: NASH, HCC, CD8KO

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 11 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E19L.feces.47w.HFD.CD8HeMup.1.3

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 96

text: MupHe-HFD (10-11M)

text: HFD

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: D

characteristic: experiment group

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: normal

characteristic: immune status

text: adult

characteristic: life stage

text: Group 3-MupHe-HFD (10-11M)

characteristic: mice group

text: sample 47

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: NASH, obesity, HCC

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 11 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E19L.feces.47w.HFD.CD8kMup.1.1

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 96

characteristic: cage

text: CD8kMup-HFD (10-11M)

characteristic: description

text: HFD

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: D

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: CD8KO - some susceptibility

characteristic: latitude

text: adult

characteristic: longitude

text: Group19-CD8kMup-HFD (10-11M)

text: sample 202

text: mouse gut metagenome

text: NASH, HCC, CD8KO

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 11 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E19L.feces.47w.HFD.CD8kMup.2.2

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 96

text: CD8kMup-HFD (10-11M)

text: HFD

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: D

characteristic: experiment group

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: CD8KO - some susceptibility

characteristic: immune status

text: adult

characteristic: life stage

text: Group19-CD8kMup-HFD (10-11M)

characteristic: mice group

text: sample 203

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: NASH, HCC, CD8KO

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 11 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E20L.feces.45w.HFD.IgAkCLM.1.6

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 60

characteristic: cage

text: IgAk-HFD (10-11M)

characteristic: description

text: HFD

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: B

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: no IgA - some susceptibility

characteristic: latitude

text: adult

characteristic: longitude

text: Group15-IgAk-HFD (10-11M)

text: sample 163

text: mouse gut metagenome

text: obese no IgA

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 11 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E20L.feces.45w.HFD.IgAkCLM.2.7

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 61

text: IgAk-HFD (10-11M)

text: HFD

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: B

characteristic: experiment group

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: no IgA - some susceptibility

characteristic: immune status

text: adult

characteristic: life stage

text: Group15-IgAk-HFD (10-11M)

characteristic: mice group

text: sample 164

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: obese no IgA

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 11 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E20L.feces.45w.HFD.IgAkCLM.3.9

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 61

characteristic: cage

text: IgAk-HFD (10-11M)

characteristic: description

text: HFD

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: B

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: no IgA - some susceptibility

characteristic: latitude

text: adult

characteristic: longitude

text: Group15-IgAk-HFD (10-11M)

text: sample 165

text: mouse gut metagenome

text: obese no IgA

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 11 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E20L.feces.45w.HFD.IgAkMup.1.3

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 60

text: IgAkMup-HFD (10-11M)

text: HFD

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: D

characteristic: experiment group

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: no IgA - some susceptibility

characteristic: immune status

text: adult

characteristic: life stage

text: Group11-IgAkMup-HFD (10-11M)

characteristic: mice group

text: sample 116

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: NASH, HCC, no IgA

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 11 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E20L.feces.45w.HFD.IgAkMup.3.5

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 60

characteristic: cage

text: IgAkMup-HFD (10-11M)

characteristic: description

text: HFD

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: D

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: no IgA - some susceptibility

characteristic: latitude

text: adult

characteristic: longitude

text: Group11-IgAkMup-HFD (10-11M)

text: sample 117

text: mouse gut metagenome

text: NASH, HCC, no IgA

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 11 months

text: Steatohepatitis progresses to cancer via immunosuppression of HCC directed by CD8+Tcells

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E20L.feces.45w.HFD.IgAkMup.4.8

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 61

text: IgAkMup-HFD (10-11M)

text: HFD

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: D

characteristic: experiment group

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: no IgA - some susceptibility

characteristic: immune status

text: adult

characteristic: life stage

text: Group11-IgAkMup-HFD (10-11M)

characteristic: mice group

text: sample 118

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: NASH, HCC, no IgA

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 11 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E20L.feces.45w.HFD.IgAkMup.5.10

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 61

characteristic: cage

text: IgAkMup-HFD (10-11M)

characteristic: description

text: HFD

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: D

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: no IgA - some susceptibility

characteristic: latitude

text: adult

characteristic: longitude

text: Group11-IgAkMup-HFD (10-11M)

text: sample 119

text: mouse gut metagenome

text: NASH, HCC, no IgA

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 11 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E20L.feces.47w.NC.IgAkMup.1.15

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 74

text: IgAkMup-NC (10-11M)

text: NC

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: C

characteristic: experiment group

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: no IgA - some susceptibility

characteristic: immune status

text: adult

characteristic: life stage

text: Group12-IgAkMup-NC (10-11M)

characteristic: mice group

text: sample 140

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: NASH, adenomas, no IgA

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 11 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E20L.feces.47w.NC.IgAkMup.2.16

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 74

characteristic: cage

text: IgAkMup-NC (10-11M)

characteristic: description

text: NC

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: C

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: no IgA - some susceptibility

characteristic: latitude

text: adult

characteristic: longitude

text: Group12-IgAkMup-NC (10-11M)

text: sample 141

text: mouse gut metagenome

text: NASH, adenomas, no IgA

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 11 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E22L.feces.25w.HFD.CD8kMup.7.19

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 88

text: CD8kMup-HFD (6M)

text: HFD

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: D

characteristic: experiment group

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: CD8KO - some susceptibility

characteristic: immune status

text: adult

characteristic: life stage

text: Group17-CD8kMup-HFD (6M)

characteristic: mice group

text: sample 189

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: NASH, obesity, CD8KO

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 6 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E22L.feces.25w.HFD.MupHe.4.4

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 2

characteristic: cage

text: MupHe-HFD (6M)

characteristic: description

text: HFD

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: D

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: normal

characteristic: latitude

text: adult

characteristic: longitude

text: Group1-MupHe-HFD (6M)

text: sample 4

text: mouse gut metagenome

text: NASH, obesity

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 6 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E22L.feces.25w.HFD.MupHe.5.5

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 2

text: MupHe-HFD (6M)

text: HFD

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: D

characteristic: experiment group

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: normal

characteristic: immune status

text: adult

characteristic: life stage

text: Group1-MupHe-HFD (6M)

characteristic: mice group

text: sample 5

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: NASH, obesity

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 6 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E22L.feces.25w.HFD.MupHe.6.6

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 2

characteristic: cage

text: MupHe-HFD (6M)

characteristic: description

text: HFD

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: D

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: normal

characteristic: latitude

text: adult

characteristic: longitude

text: Group1-MupHe-HFD (6M)

text: sample 6

text: mouse gut metagenome

text: NASH, obesity

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 6 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E22L.feces.26w.HFD.CD8kMup.3.15

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 86

text: CD8kMup-HFD (6M)

text: HFD

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: D

characteristic: experiment group

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: CD8KO - some susceptibility

characteristic: immune status

text: adult

characteristic: life stage

text: Group17-CD8kMup-HFD (6M)

characteristic: mice group

text: sample 185

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: NASH, obesity, CD8KO

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 6 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E22L.feces.26w.HFD.CD8kMup.4.16

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 86

characteristic: cage

text: CD8kMup-HFD (6M)

characteristic: description

text: HFD

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: D

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: CD8KO - some susceptibility

characteristic: latitude

text: adult

characteristic: longitude

text: Group17-CD8kMup-HFD (6M)

text: sample 186

text: mouse gut metagenome

text: NASH, obesity, CD8KO

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 6 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E22L.feces.26w.HFD.CD8kMup.5.17

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 87

text: CD8kMup-HFD (6M)

text: HFD

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: D

characteristic: experiment group

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: CD8KO - some susceptibility

characteristic: immune status

text: adult

characteristic: life stage

text: Group17-CD8kMup-HFD (6M)

characteristic: mice group

text: sample 187

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: NASH, obesity, CD8KO

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 6 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E22L.feces.26w.HFD.CD8kMup.6.18

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 87

characteristic: cage

text: CD8kMup-HFD (6M)

characteristic: description

text: HFD

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: D

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: CD8KO - some susceptibility

characteristic: latitude

text: adult

characteristic: longitude

text: Group17-CD8kMup-HFD (6M)

text: sample 188

text: mouse gut metagenome

text: NASH, obesity, CD8KO

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 6 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E22L.feces.26w.HFD.IgAkMup.3.9

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 47

text: IgAkMup-HFD (6M)

text: HFD

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: D

characteristic: experiment group

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: no IgA - some susceptibility

characteristic: immune status

text: adult

characteristic: life stage

text: Group9-IgAkMup-HFD (6M)

characteristic: mice group

text: sample 95

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: NASH, obesity, no IgA

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 6 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E22L.feces.26w.HFD.IgAkMup.4.10

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 47

characteristic: cage

text: IgAkMup-HFD (6M)

characteristic: description

text: HFD

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: D

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: no IgA - some susceptibility

characteristic: latitude

text: adult

characteristic: longitude

text: Group9-IgAkMup-HFD (6M)

text: sample 96

text: mouse gut metagenome

text: NASH, obesity, no IgA

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 6 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E22L.feces.26w.HFD.IgAkMup.5.11

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 48

text: IgAkMup-HFD (6M)

text: HFD

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: D

characteristic: experiment group

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: no IgA - some susceptibility

characteristic: immune status

text: adult

characteristic: life stage

text: Group9-IgAkMup-HFD (6M)

characteristic: mice group

text: sample 97

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: NASH, obesity, no IgA

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 6 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E22L.feces.26w.HFD.IgAkMup.6.12

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 48

characteristic: cage

text: IgAkMup-HFD (6M)

characteristic: description

text: HFD

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: D

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: no IgA - some susceptibility

characteristic: latitude

text: adult

characteristic: longitude

text: Group9-IgAkMup-HFD (6M)

text: sample 98

text: mouse gut metagenome

text: NASH, obesity, no IgA

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 6 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E22L.feces.27w.HFD.MupHe.1.1

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 1

text: MupHe-HFD (6M)

text: HFD

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: D

characteristic: experiment group

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: normal

characteristic: immune status

text: adult

characteristic: life stage

text: Group1-MupHe-HFD (6M)

characteristic: mice group

text: sample 1

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: NASH, obesity

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 6 months

characteristic: timepoint

characteristic: title

text: Steatohepatitis progresses to cancer via immunosuppression of HCC directed by CD8+Tcells

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E22L.feces.27w.HFD.MupHe.2.2

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 1

characteristic: cage

text: MupHe-HFD (6M)

characteristic: description

text: HFD

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: D

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: normal

characteristic: latitude

text: adult

characteristic: longitude

text: Group1-MupHe-HFD (6M)

text: sample 2

text: mouse gut metagenome

text: NASH, obesity

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 6 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E22L.feces.27w.HFD.MupHe.3.3

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 1

text: MupHe-HFD (6M)

text: HFD

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: D

characteristic: experiment group

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: normal

characteristic: immune status

text: adult

characteristic: life stage

text: Group1-MupHe-HFD (6M)

characteristic: mice group

text: sample 3

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: NASH, obesity

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 6 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E22L.feces.28w.HFD.CD8kMup.1.13

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 85

characteristic: cage

text: CD8kMup-HFD (6M)

characteristic: description

text: HFD

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: D

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: CD8KO - some susceptibility

characteristic: latitude

text: adult

characteristic: longitude

text: Group17-CD8kMup-HFD (6M)

text: sample 183

text: mouse gut metagenome

text: NASH, obesity, CD8KO

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 6 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E22L.feces.28w.HFD.CD8kMup.2.14

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 85

text: CD8kMup-HFD (6M)

text: HFD

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: D

characteristic: experiment group

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: CD8KO - some susceptibility

characteristic: immune status

text: adult

characteristic: life stage

text: Group17-CD8kMup-HFD (6M)

characteristic: mice group

text: sample 184

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: NASH, obesity, CD8KO

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 6 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E22L.feces.29w.HFD.IgAkMup.1.7

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 46

characteristic: cage

text: IgAkMup-HFD (6M)

characteristic: description

text: HFD

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: D

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: no IgA - some susceptibility

characteristic: latitude

text: adult

characteristic: longitude

text: Group9-IgAkMup-HFD (6M)

text: sample 93

text: mouse gut metagenome

text: NASH, obesity, no IgA

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 6 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E22L.feces.29w.HFD.IgAkMup.2.8

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 46

text: IgAkMup-HFD (6M)

text: HFD

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: D

characteristic: experiment group

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: no IgA - some susceptibility

characteristic: immune status

text: adult

characteristic: life stage

text: Group9-IgAkMup-HFD (6M)

characteristic: mice group

text: sample 94

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: NASH, obesity, no IgA

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 6 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E23La.feces.47w.ctrl.HFD.MupHe.CD4he.1.1

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 24

characteristic: cage

text: MupHe-HFD (10-11M)

characteristic: description

text: HFD

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: D

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: normal

characteristic: latitude

text: adult

characteristic: longitude

text: Group 3-MupHe-HFD (10-11M)

text: sample 39

text: mouse gut metagenome

text: NASH, obesity, HCC

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 11 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E23La.feces.49w.ctrl.HFD.MupHe.Cd4he.1.2

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 95

text: MupHe-HFD (10-11M)

text: HFD

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: D

characteristic: experiment group

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: normal

characteristic: immune status

text: adult

characteristic: life stage

text: Group 3-MupHe-HFD (10-11M)

characteristic: mice group

text: sample 40

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: NASH, obesity, HCC

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 11 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E23La.feces.51w.LALAPG.HFD.MupHe.1.9

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 12

characteristic: cage

text: MupHe-HFD-LALAPG (10-11M)

characteristic: description

text: HFD

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: normal

characteristic: latitude

text: adult

characteristic: longitude

text: Group49-MupHe-HFD-LALAPG (10-11M)

text: sample 395

text: mouse gut metagenome

text: HCC

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 11 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E23La.feces.51w.LALAPG.HFD.MupHe.2.10

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 12

text: MupHe-HFD-LALAPG (10-11M)

text: HFD

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: normal

characteristic: immune status

text: adult

characteristic: life stage

text: Group49-MupHe-HFD-LALAPG (10-11M)

characteristic: mice group

text: sample 396

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: HCC

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 11 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E23La.feces.51w.LALAPG.HFD.MupHe.3.11

characteristic: Submitter Id

characteristic: age

text: weeks

characteristic: age units

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 154

characteristic: cage

text: MupHe-HFD-LALAPG (10-11M)

characteristic: description

text: HFD

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: normal

characteristic: latitude

text: adult

characteristic: longitude

text: Group49-MupHe-HFD-LALAPG (10-11M)

text: sample 397

text: mouse gut metagenome

text: HCC

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 11 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E23La.feces.51w.aPDL1.HFD.MupHe.1.6

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 12

text: MupHe-HFD-aPD-L1 (10-11M)

text: HFD

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: D

characteristic: experiment group

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: normal

characteristic: immune status

text: adult

characteristic: life stage

text: Group48-MupHe-HFD-aPD-L1 (10-11M)

characteristic: mice group

text: sample 392

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: HCC

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 11 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E23La.feces.51w.aPDL1.HFD.MupHe.2.7

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 12

characteristic: cage

text: MupHe-HFD-aPD-L1 (10-11M)

characteristic: description

text: HFD

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: D

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: normal

characteristic: latitude

text: adult

characteristic: longitude

text: Group48-MupHe-HFD-aPD-L1 (10-11M)

text: sample 393

text: mouse gut metagenome

text: HCC

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 11 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E23La.feces.51w.aPDL1.HFD.MupHe.3.8

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 154

text: MupHe-HFD-aPD-L1 (10-11M)

text: HFD

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: D

characteristic: experiment group

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: normal

characteristic: immune status

text: adult

characteristic: life stage

text: Group48-MupHe-HFD-aPD-L1 (10-11M)

characteristic: mice group

text: sample 394

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: HCC

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 11 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E23La.feces.51w.ctrl.HFD.B6.1.12

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 39

characteristic: cage

text: B6-HFD (10-11M)

characteristic: description

text: HFD

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: B

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: normal

characteristic: latitude

text: adult

characteristic: longitude

text: Group 7-B6-HFD (10-11M)

text: sample 78

text: mouse gut metagenome

text: obese only

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 6 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E23La.feces.51w.ctrl.HFD.B6.2.13

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 39

text: B6-HFD (10-11M)

text: HFD

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: B

characteristic: experiment group

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: normal

characteristic: immune status

text: adult

characteristic: life stage

text: Group 7-B6-HFD (10-11M)

characteristic: mice group

text: sample 79

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: obese only

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 6 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit