characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: I do not have this condition

text: false

characteristic: acne medication

text: false

text: I do not have this condition

characteristic: age cat

characteristic: age years

text: true

characteristic: alcohol consumption

text: Rarely (a few times/month)

text: Not provided

text: Yes

text: false

text: false

text: false

text: false

text: false

text: false

characteristic: allergic to i have no food allergies that i know of

text: Not provided

text: true

text: false

text: false

text: false

text: false

text: I do not have this condition

characteristic: alzheimers

characteristic: anonymized name

text: Year

text: false

text: Never

text: I do not have this condition

characteristic: asd

characteristic: autoimmune

characteristic: birth year

text: Normal

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: Less than one

text: I tend to have normal formed stool - Type 3 and 4

text: false

text: I do not have this condition

text: Not provided

text: I do not have this condition

text: false

text: I do not have this condition

text: West

text: Yes

text: I do not have this condition

text: July

text: Summer

text: 2016-07-18 09:30

text: Not sure

text: No

text: Never

text: USA

characteristic: country

text: Singapore

text: United States

text: false

text: I do not use deodorant or an antiperspirant

text: Not provided

text: American Gut Project Stool Sample

text: I do not have this condition

text: Not provided

text: Omnivore

text: true

text: false

text: I am right handed

text: Filtered

text: Not provided

text: Far West

text: dense settlement biome

text: human-associated habitat

text: human-gut

text: feces

text: I do not have this condition

text: Occasionally (1-2 times/week)

text: Both

text: Primarily infant formula

text: Rarely (less than once/week)

text: Daily

text: Year

text: Rarely (less than once/week)

text: Occasionally (1-2 times/week)

text: I do not have this condition

text: USA:WA

text: No

text: true

text: centimeters

text: Rarely (less than once/week)

text: Regularly (3-5 times/week)

text: human

text: 0d99de4a69485577a74c02fe0a74e1381bc8cfc0ebc16afe05770d655cb123d6f0a55e8da54fdc77df60594828a7c616a649f8fc304113051bb8c35c9d440d36

text: I do not have this condition

text: Not provided

text: Not provided

text: I do not have this condition

text: I do not have this condition

text: true

text: Graduate or Professional degree

text: I do not have this condition

text: Not sure

text: false

text: I do not have this condition

text: Occasionally (1-2 times/week)

text: false

text: Not provided

text: false

text: false

text: false

text: false

text: false

text: false

text: false

text: true

text: I do not have this condition

text: Rarely (less than once/week)

text: Rarely (less than once/week)

text: false

text: false

text: Not provided

text: false

text: false

text: true

text: false

text: false

text: false

text: Rarely (less than once/week)

text: Daily

text: human gut metagenome

text: false

text: false

text: UCSDMI

text: true

text: I do not have this condition

text: Rarely (a few times/month)

text: Regularly (3-5 times/week)

text: false

text: Occasionally (1-2 times/week)

text: Rarely (a few times/month)

text: true

text: Asian or Pacific Islander

text: Rarely (less than once/week)

text: Rarely (less than once/week)

text: No

text: Rarely (less than once/week)

text: Stool

text: human gut metagenome

text: Regularly (3-5 times/week)

text: Yes

text: male

text: I do not have this condition

text: I do not have this condition

text: 6-7 hours

text: Never

text: Yes

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: WA

text: True

text: False

text: True

text: True

text: False

text: True

text: Rarely (less than once/week)

text: Rarely (less than once/week)

text: Daily

text: Not provided

text: American Gut Project

text: false

text: Less than 5

text: Occasionally (1-2 times/week)

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

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text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Rarely (a few times/month)

text: Daily

text: Rarely (a few times/month)

text: Remained stable

text: kilograms

text: Occasionally (1-2 times/week)

text: Occasionally (1-2 times/week)


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

text: Not provided

text: false

text: false

text: Diagnosed by a medical professional (doctor, physician assistant)

text: false

text: Never

text: Not provided

text: No

text: false

text: false

text: false

text: true

text: false

text: true

text: Not provided

text: false

text: false

text: false

text: false

text: false

text: I do not have this condition

text: I have not taken antibiotics in the past year.

text: true

text: Not provided

text: Self-diagnosed

text: I do not have this condition

characteristic: bmi

text: Normal

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: One

text: false

text: Not provided

characteristic: cancer

text: Not provided

characteristic: cancer treatment

text: I do not have this condition

text: false

characteristic: cat

text: I do not have this condition

characteristic: cdiff

text: Northeast

text: Yes

characteristic: chickenpox

text: Not provided

characteristic: clinical condition

characteristic: collection date

text: July

characteristic: collection month

text: Summer

characteristic: collection season

characteristic: collection time

text: 2016-07-13 12:20

text: No

text: No

characteristic: contraceptive

text: Never

text: USA

text: United States

characteristic: country of birth

text: Not provided

text: false

text: I do not have this condition

text: American Gut Project Stool Sample

text: I do not have this condition

text: Not provided

text: Omnivore

text: true

text: false

text: I am right handed

text: Filtered

text: Not provided

text: New England

text: dense settlement biome

text: human-associated habitat

text: human-gut

text: feces

text: I do not have this condition

text: Regularly (3-5 times/week)

text: Outdoors

text: Primarily infant formula

text: Regularly (3-5 times/week)

text: Regularly (3-5 times/week)

text: I have not gotten the flu vaccine in the past year.

text: Never

text: Rarely (less than once/week)

text: Self-diagnosed

text: USA:MA

text: No

text: true

text: centimeters

text: Never

text: Daily

text: human

text: 9c1c05d3dd7bf38a80185ff97b53070fa771e3841f68386ed48a0aa1eb15c45cd4ab78e1f9721613a8b6988a814cbe280c30c1ddb8ac4424db24a95d4e9c39e5

text: I do not have this condition

text: Not provided

text: Not provided

text: I do not have this condition

text: I do not have this condition

text: false

text: I have lived in my current state of residence for more than a year.

text: I have not been outside of my country of residence in the past year.

text: Graduate or Professional degree

text: I do not have this condition

text: No

text: true

text: I do not have this condition

text: Regularly (3-5 times/week)

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: I do not have this condition

text: Never

text: Never

text: false

text: true

text: Not provided

text: false

text: false

text: false

text: false

text: false

text: true

text: Regularly (3-5 times/week)

text: Daily

text: human gut metagenome

text: true

text: Not provided

text: UCSDMI

text: true

text: I do not have this condition

text: Never

text: Rarely (less than once/week)

text: false

text: Rarely (less than once/week)

text: Regularly (3-5 times/week)

text: true

text: Caucasian

text: Never

text: Rarely (less than once/week)

text: No

text: Never

text: Stool

text: human gut metagenome

text: Rarely (less than once/week)

text: No

text: male

text: I do not have this condition

text: I do not have this condition

text: 8 or more hours

text: Never

text: No

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: MA

text: True

text: True

text: True

text: True

text: True

text: True

text: Never

text: Rarely (less than once/week)

text: Not provided

text: I do not have this condition

text: American Gut Project

text: false

text: Not provided

text: Daily

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

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text: Not provided

text: Occasionally (1-2 times/week)

text: Regularly (3-5 times/week)

text: Not provided

text: Increased more than 10 pounds

text: kilograms

text: Regularly (3-5 times/week)

text: Rarely (less than once/week)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: American Gut control

characteristic: description

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: misc environment

characteristic: env package

text: sterile water

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host subject id

text: metagenome

characteristic: organism

text: UCSDMI

text: true

characteristic: public

text: control blank

characteristic: sample type

text: metagenome

text: American Gut Project

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

text: American Gut control

text: urban biome

text: research facility

text: misc environment

text: sterile water

text: USA:CA:San Diego

text: metagenome

text: UCSDMI

text: true

text: control blank

text: metagenome

text: American Gut Project


text: NIOZ

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: depth

text: artificial minimal coastal microbial mats at dilution 0, replicate 1

text: Microbial Mat Material

characteristic: environment (biome)

text: Beach

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Netherlands

characteristic: geographic location (country and/or sea)

unit: m

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: microbial mat/biofilm

characteristic: microbial mat/biofilm environmental package

text: metagenome

text: Minimal Mat

characteristic: project name

unit: hour

characteristic: sample storage duration

unit: °C

characteristic: sample storage temperature

text: metagenome

text: illumina PE100

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NIOZ

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: artificial minimal coastal microbial mats at dilution 0, replicate 2

characteristic: description

text: Microbial Mat Material

text: Beach

text: soil

text: Netherlands

text: metagenome

text: microbial mat/biofilm

text: metagenome

characteristic: organism

text: Minimal Mat

text: metagenome

text: illumina PE100

characteristic: title


text: NIOZ

text: public

characteristic: collection date

characteristic: depth

text: artificial minimal coastal microbial mats at dilution 0, replicate 3

text: Microbial Mat Material

characteristic: environment (biome)

text: Beach

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Netherlands

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: microbial mat/biofilm

characteristic: microbial mat/biofilm environmental package

text: metagenome

text: Minimal Mat

characteristic: project name

text: metagenome

text: illumina PE100


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NIOZ

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: artificial minimal coastal microbial mats at dilution 3, replicate 1

text: Microbial Mat Material

text: Beach

text: soil

text: Netherlands

text: metagenome

text: microbial mat/biofilm

text: metagenome

text: Minimal Mat

characteristic: sample storage duration

characteristic: sample storage temperature

text: metagenome

text: illumina PE100

characteristic: sequencing method


text: NIOZ

text: public

characteristic: collection date

characteristic: depth

text: artificial minimal coastal microbial mats at dilution 3, replicate 2

characteristic: description

text: Microbial Mat Material

characteristic: environment (biome)

text: Beach

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Netherlands

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: microbial mat/biofilm

text: metagenome

characteristic: organism

text: Minimal Mat

text: metagenome

text: illumina PE100

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NIOZ

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: artificial minimal coastal microbial mats at dilution 3, replicate 3

text: Microbial Mat Material

text: Beach

text: soil

text: Netherlands

text: metagenome

characteristic: investigation type

text: microbial mat/biofilm

characteristic: microbial mat/biofilm environmental package

text: metagenome

text: Minimal Mat

characteristic: project name

text: metagenome

text: illumina PE100


text: NIOZ

text: public

characteristic: collection date

characteristic: depth

text: artificial minimal coastal microbial mats at dilution 5, replicate 1

characteristic: description

text: Microbial Mat Material

characteristic: environment (biome)

text: Beach

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Netherlands

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

text: metagenome

text: microbial mat/biofilm

text: metagenome

text: Minimal Mat

characteristic: sample storage duration

characteristic: sample storage temperature

text: metagenome

text: illumina PE100

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NIOZ

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: artificial minimal coastal microbial mats at dilution 5, replicate 2

text: Microbial Mat Material

text: Beach

text: soil

text: Netherlands

characteristic: geographic location (longitude)

text: metagenome

text: microbial mat/biofilm

text: metagenome

characteristic: organism

text: Minimal Mat

text: metagenome

text: illumina PE100

characteristic: title


text: NIOZ

text: public

characteristic: collection date

characteristic: depth

text: artificial minimal coastal microbial mats at dilution 5, replicate 3

characteristic: description

text: Microbial Mat Material

characteristic: environment (biome)

text: Beach

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Netherlands

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

text: metagenome

characteristic: investigation type

text: microbial mat/biofilm

characteristic: microbial mat/biofilm environmental package

text: metagenome

text: Minimal Mat

characteristic: project name

text: metagenome

text: illumina PE100


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF WASHINGOTN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Latitude End

characteristic: Longitude End

characteristic: SRA accession

tag: Namespace:UNIVERSITY OF WASHINGOTN

characteristic: Submitter Id

text: KM Cruise chlorophyll max

text: marine

text: marine

text: marine

text: water

characteristic: environmental package

characteristic: event date/time

characteristic: latitude start

characteristic: longitude start

text: Pacific Ocean

characteristic: marine region

text: bacterium

text: Variable influence of light

text: sterivex filter

characteristic: protocol label

unit: practical salinity unit

characteristic: salinity

text: KM cruise 2013

characteristic: sampling campaign

text: RV Kilo Mano

characteristic: sampling platform

text: Coastal Pacific Ocean

characteristic: sampling site

text: bacterium

unit: ºC

characteristic: temperature

text: KM Cruise chlorophyll max


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF WASHINGOTN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: depth

text: Variable influence of light

characteristic: description

text: marine

characteristic: environment (biome)

text: marine

characteristic: environment (feature)

text: marine

characteristic: environment (material)

text: water

text: Pacific Coast

text: bacterium

characteristic: organism

text: Variable influence of light on thaumarchaea

characteristic: project name

text: RV Kilo Manoa

text: Pacific Ocean

text: bacterium

text: Station 1, Nitrite Max, 16S rRNA gene V1V3 amplicon

characteristic: title


text: UNIVERSITY OF WASHINGOTN

text: public

characteristic: INSDC status

characteristic: Latitude End

characteristic: Longitude End

characteristic: SRA accession

characteristic: Submitter Id

text: Variable influence of light

text: marine

text: marine

text: marine

text: water

characteristic: environmental package

characteristic: event date/time

characteristic: latitude start

characteristic: longitude start

text: Coastal Pacific

characteristic: marine region

text: bacterium

text: variable influence of light on thaumarchaea

characteristic: protocol label

characteristic: salinity

characteristic: sampling campaign

text: RV Kilo Manoa

characteristic: sampling platform

text: Coastal Pacific

characteristic: sampling site

text: bacterium

text: KM Cruise, Station 1, surface


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF CONNECTICUT

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:UNIVERSITY OF CONNECTICUT

text: Maintained in lab for 2.5 months

characteristic: description

text: Euprymna scolopes

characteristic: organism

text: Euprymna scolopes

text: egg jelly coat

characteristic: tissue type

text: E. scolopes lab-maintained ANG


text: UNIVERSITY OF CONNECTICUT

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Maintained in lab for 4 months

text: Euprymna scolopes

text: Euprymna scolopes

text: egg jelly coat

text: E. scolopes lab-maintained ANG

characteristic: title


text: UNIVERSITY OF CONNECTICUT

text: public

text: Euprymna scolopes

text: Euprymna scolopes

text: egg jelly coat

text: E. scolopes egg jelly coat, 0 days post-deposit


text: UNIVERSITY OF CONNECTICUT

text: public

text: Euprymna scolopes

text: Euprymna scolopes

text: egg jelly coat

text: E. scolopes egg jelly coat, 10 days post-deposit


text: UNIVERSITY OF CONNECTICUT

text: public

text: Euprymna scolopes

text: Euprymna scolopes

text: egg jelly coat

text: E. scolopes egg jelly coat, 18 days post-deposit


text: UNIVERSITY OF CONNECTICUT

text: public

text: Euprymna scolopes

text: Euprymna scolopes

text: egg jelly coat

text: E. scolopes egg jelly coat, 17 days post-deposit


text: UNIVERSITY OF WASHINGOTN

text: public

characteristic: Latitude End

characteristic: Longitude End

characteristic: depth

text: marine

characteristic: environment (biome)

text: marine

characteristic: environment (feature)

text: marine

characteristic: environment (material)

text: water

characteristic: environmental package

characteristic: event date/time

characteristic: latitude start

characteristic: longitude start

text: Pacific

characteristic: marine region

text: bacterium

text: variable influence of light on thaumarchaaea

characteristic: project name

characteristic: protocol label

characteristic: salinity

characteristic: sampling campaign

text: Pacific Ocean

text: Pacific Ocean

text: bacterium

characteristic: temperature

text: Station 3, surface


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF WASHINGOTN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: description

text: marine

text: marine

text: marine

text: water

text: Pacifc

text: bacterium

characteristic: organism

text: RV Kilo Mano

characteristic: sampling platform

text: Pacific

characteristic: sampling site

text: bacterium

text: Station 3, nitrite max

characteristic: title


text: public

text: not provided

characteristic: collection date

text: Germany

characteristic: country

text: Homo sapiens

characteristic: host

text: Yes

characteristic: host associated

text: Citrobacter freundii

text: Citrobacter freundii

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF WASHINGOTN

text: public

characteristic: Latitude End

characteristic: Longitude End

characteristic: depth

text: marine

characteristic: environment (biome)

text: marine

characteristic: environment (feature)

text: marine

characteristic: environment (material)

text: water

characteristic: environmental package

characteristic: event date/time

characteristic: latitude start

characteristic: longitude start

text: Pacific Ocean

characteristic: marine region

text: bacterium

text: variable influence of light

characteristic: project name

characteristic: protocol label

characteristic: salinity

characteristic: sampling campaign

text: RV Kilo Manoa

text: Pacific Ocean

text: bacterium

characteristic: temperature

text: Station 16, surface


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF WASHINGOTN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: description

text: marine

text: marine

text: marine

text: water

text: Pacific

text: bacterium

characteristic: organism

text: RV Kilo Manoa

characteristic: sampling platform

text: Pacific

characteristic: sampling site

text: bacterium

text: Station 16, nitrite max

characteristic: title


text: UNIVERSITY OF WASHINGOTN

text: public

characteristic: Latitude End

characteristic: Longitude End

characteristic: depth

text: marine

characteristic: environment (biome)

text: marine

characteristic: environment (feature)

text: marine

characteristic: environment (material)

text: water

characteristic: environmental package

characteristic: event date/time

characteristic: latitude start

characteristic: longitude start

text: Pacific

characteristic: marine region

text: bacterium

text: variabel influence of light

characteristic: project name

characteristic: protocol label

characteristic: salinity

characteristic: sampling campaign

text: RV Kilo Manoa

text: Pacific

text: bacterium

text: Station 16, chlorophyll max


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: not provided

characteristic: collection date

text: Germany

characteristic: country

text: Homo sapiens

characteristic: host

text: Yes

characteristic: host associated

text: urine

characteristic: isolation source host associated

text: Citrobacter freundii

characteristic: organism

text: Citrobacter freundii

characteristic: strain


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF WASHINGOTN

text: public

characteristic: Latitude End

characteristic: Longitude End

characteristic: depth

characteristic: description

text: marine

characteristic: environment (biome)

text: marine

characteristic: environment (feature)

text: marine

characteristic: environment (material)

text: water

characteristic: environmental package

characteristic: event date/time

characteristic: latitude start

characteristic: longitude start

text: Pacific

characteristic: marine region

text: bacterium

characteristic: project name

characteristic: protocol label

characteristic: salinity

characteristic: sampling campaign

text: Kilo Manoa

characteristic: sampling platform

text: Pacific

characteristic: sampling site

text: bacterium

characteristic: temperature

text: Station 15, surface

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF WASHINGOTN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Latitude End

characteristic: Longitude End

characteristic: SRA accession

characteristic: Submitter Id

characteristic: depth

characteristic: description

text: marine

text: marine

text: marine

text: water

text: Pacific

text: bacterium

characteristic: organism

text: variable influence of light

text: RV Kilo Manoa

text: Pacific

text: bacterium

text: station 15, nitrite max


text: UNIVERSITY OF WASHINGOTN

text: public

text: marine

characteristic: environment (biome)

text: marine

characteristic: environment (feature)

text: marine

characteristic: environment (material)

text: water

characteristic: environmental package

characteristic: event date/time

characteristic: latitude start

characteristic: longitude start

text: Pacific

characteristic: marine region

text: bacterium

characteristic: project name

characteristic: protocol label

characteristic: salinity

characteristic: sampling campaign

text: RV Kilo Manoa

characteristic: sampling platform

text: Pacific

characteristic: sampling site

text: bacterium

characteristic: temperature

text: Station 15, chlorophyll max


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF WASHINGOTN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Latitude End

characteristic: Longitude End

characteristic: SRA accession

characteristic: Submitter Id

characteristic: depth

text: variable influence of light on thaumarhcaea

characteristic: description

text: marine

text: marine

text: marine

text: water

text: Pacific

text: bacterium

text: Pacific

text: RV Kilo Manoa

text: Pacific

text: bacterium

text: Station 8, near surface, 15 meters (0.2 micron fraction)

characteristic: title


text: UNIVERSITY OF WASHINGOTN

text: public

text: - 144.48241

text: marine

characteristic: environment (biome)

text: marine

characteristic: environment (feature)

text: marine

characteristic: environment (material)

text: water

characteristic: environmental package

characteristic: event date/time

characteristic: latitude start

text: - 144.48241

characteristic: longitude start

text: Pacific

characteristic: marine region

text: bacterium

characteristic: organism

characteristic: project name

characteristic: protocol label

characteristic: salinity

characteristic: sampling campaign

text: Kilo Manoa

characteristic: sampling platform

text: Pacific

characteristic: sampling site

text: bacterium

text: Station 8, 300m


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF WASHINGOTN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Latitude End

characteristic: Longitude End

characteristic: SRA accession

characteristic: Submitter Id

characteristic: depth

characteristic: description

text: marine

text: marine

text: marine

text: water

text: Pacific

text: bacterium

text: RV Kilo Manoa

text: Pacific

text: bacterium

characteristic: temperature

text: Station 8, chlorophyll max


text: UNIVERSITY OF WASHINGOTN

text: public

text: influence of light on thaumarchaea

text: marine

characteristic: environment (biome)

text: marine

characteristic: environment (feature)

text: marine

characteristic: environment (material)

text: water

characteristic: environmental package

characteristic: event date/time

characteristic: latitude start

characteristic: longitude start

text: Pacific

characteristic: marine region

text: bacterium

characteristic: organism

characteristic: project name

characteristic: protocol label

characteristic: salinity

characteristic: sampling campaign

text: Kilo Manoa

characteristic: sampling platform

text: Pacific

text: bacterium

text: Station 8, nitrite max

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:MAX PLANCK INSTITUTE FOR PLANT BREEDING RESEARCH

characteristic: Submitter Id

text: Conringia planisiliqua whole genomic DNA sample for PacBio Sequencing

characteristic: description

text: Conringia planisiliqua

text: Conringia planisiliqua


text: UNIVERSITY OF WASHINGOTN

text: public

characteristic: Latitude End

characteristic: Longitude End

characteristic: depth

text: marine

characteristic: environment (biome)

text: marine

characteristic: environment (feature)

text: marine

characteristic: environment (material)

text: water

characteristic: environmental package

characteristic: event date/time

characteristic: latitude start

characteristic: longitude start

text: Pacific

characteristic: marine region

text: bacterium

characteristic: organism

text: variable influence of light

characteristic: project name

text: RV Kilo Mano

text: Pacific

characteristic: sampling site

text: bacterium

characteristic: temperature

text: Station 8, surface


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:LABORATORIO NACIONAL DE CIENCIA E TECNOLOGIA DO BI

characteristic: Submitter Id

text: Edimar Moreira

characteristic: collected by

text: Cornitermes

text: Brazil

characteristic: geographic location (region and locality)

text: metagenome

text: metagenome

characteristic: title


text: LABORATORIO NACIONAL DE CIENCIA E TECNOLOGIA DO BI

text: public

text: Edimar Moreira

text: Brazil

text: metagenome

characteristic: organism

text: metagenome


text: public

text: Edimar Moreira

characteristic: collection date

text: Termites associated microbial community

characteristic: description

text: Brazil

text: metagenome

text: metagenome


text: UNIVERSITY OF WASHINGOTN

text: public

characteristic: Latitude End

characteristic: Longitude End

characteristic: depth

text: marine

characteristic: environment (biome)

text: marine

characteristic: environment (feature)

text: marine

characteristic: environment (material)

text: water

characteristic: environmental package

characteristic: event date/time

characteristic: latitude start

characteristic: longitude start

text: Pacific

characteristic: marine region

text: bacterium

text: variable influence of light

characteristic: project name

characteristic: protocol label

characteristic: salinity

characteristic: sampling campaign

text: RV Kilo Manoa

characteristic: sampling platform

text: Pacific

characteristic: sampling site

text: bacterium

characteristic: temperature

text: Station 5, surface


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF WASHINGOTN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Latitude End

characteristic: Longitude End

characteristic: SRA accession

characteristic: Submitter Id

characteristic: description

text: marine

text: marine

text: marine

text: water

text: Pacific

text: bacterium

characteristic: organism

text: RV Kilo Manoa

text: Pacific

text: bacterium

text: Station 5, nitrite max

characteristic: title


text: UNIVERSITY OF WASHINGOTN

text: public

characteristic: depth

text: marine

characteristic: environment (biome)

text: marine

characteristic: environment (feature)

text: marine

characteristic: environment (material)

text: water

characteristic: environmental package

characteristic: event date/time

characteristic: latitude start

characteristic: longitude start

text: Pacific

characteristic: marine region

text: bacterium

characteristic: project name

characteristic: protocol label

characteristic: salinity

characteristic: sampling campaign

text: RV Kilo Manoa

characteristic: sampling platform

text: Pacific

characteristic: sampling site

text: bacterium

text: Station 5, chlorophyll max


Escherichia coli RC2-0071

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INSTITUTO NACIONAL DE SALUD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Escherichia coli RC2-0071

tag: Namespace:INSTITUTO NACIONAL DE SALUD

characteristic: Submitter Id

characteristic: collection date

text: Escherichia coli RC2-007 colistine resistance

characteristic: description

text: Mexico

characteristic: geographic location (country and/or sea)

text: healthy

characteristic: host health state

text: Sus scrofa domestica

characteristic: host scientific name

characteristic: isolate

text: Pig Farm

characteristic: isolation source

text: Escherichia coli

characteristic: organism

text: Escherichia coli

characteristic: serovar


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF WASHINGOTN

text: public

characteristic: Latitude End

characteristic: Longitude End

characteristic: depth

text: marine

characteristic: environment (biome)

text: marine

characteristic: environment (feature)

text: marine

characteristic: environment (material)

text: water

characteristic: environmental package

characteristic: event date/time

characteristic: latitude start

characteristic: longitude start

text: Pacific

characteristic: marine region

text: bacterium

characteristic: project name

characteristic: protocol label

characteristic: salinity

characteristic: sampling campaign

text: RV Kilo Manoa

characteristic: sampling platform

text: Pacific

characteristic: sampling site

text: bacterium

characteristic: temperature

text: Station 10, surface

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF WASHINGOTN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Latitude End

characteristic: Longitude End

characteristic: SRA accession

characteristic: Submitter Id

characteristic: depth

characteristic: description

text: marine

text: marine

text: marine

text: water

text: Pacific

text: bacterium

characteristic: organism

text: RV Kilo Manoa

text: Pacific

text: bacterium

text: Station 10, nitrite max


text: UNIVERSITY OF WASHINGOTN

text: public

text: marine

characteristic: environment (biome)

text: marine

characteristic: environment (feature)

text: marine

characteristic: environment (material)

text: water

characteristic: environmental package

characteristic: event date/time

characteristic: latitude start

characteristic: longitude start

text: Pacific

characteristic: marine region

text: bacterium

characteristic: project name

characteristic: protocol label

characteristic: salinity

characteristic: sampling campaign

text: RV Kilo Manoa

characteristic: sampling platform

text: Pacific

characteristic: sampling site

text: bacterium

characteristic: temperature

text: Station 10, chorophyll max


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IFR

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: The complete genome sequence of Desulfovibrio piger FI11049.

characteristic: description

text: Desulfovibrio piger

text: Desulfovibrio piger

characteristic: strain

characteristic: title


text: MAX PLANCK INSTITUTE FOR PLANT BREEDING RESEARCH

text: public

text: E. syriacum seed material was obtained from Kew Millenium Seedbank databased with accession code KEW653912.

text: Euclidium syriacum

characteristic: organism

text: Euclidium syriacum

text: Euclidium syriacum genomic DNA sample for PacBio Sequencing


text: public

text: gray rockcress

characteristic: common name

text: For A. alpina, offspring of the reference accession Pajares were used

text: Arabis alpina

text: Arabis alpina

text: Arabis alpina whole genomic DNA for PacBio Sequencing


text: UNIVERSITY OF WASHINGOTN

text: public

characteristic: Latitude End

characteristic: Longitude End

characteristic: depth

text: variable influence of light on thaumarchaea

text: marine

characteristic: environment (biome)

text: marine

characteristic: environment (feature)

text: marine

characteristic: environment (material)

text: water

characteristic: environmental package

characteristic: event date/time

characteristic: latitude start

characteristic: longitude start

text: Pacific

characteristic: marine region

text: bacterium

characteristic: project name

characteristic: protocol label

characteristic: salinity

characteristic: sampling campaign

text: RV Kilo Manoa

characteristic: sampling platform

text: Pacific

characteristic: sampling site

text: bacterium

text: Station 11, chlorophyll max


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF WASHINGOTN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Latitude End

characteristic: SRA accession

characteristic: Submitter Id

characteristic: description

text: marine

text: marine

text: marine

text: water

text: Pacific

text: bacterium

characteristic: organism

text: Pacific

text: Pacific

text: bacterium

characteristic: temperature

text: Station 11, nitrite max

characteristic: title


text: UNIVERSITY OF WASHINGOTN

text: public

characteristic: Longitude End

characteristic: depth

text: marine

characteristic: environment (biome)

text: marine

characteristic: environment (feature)

text: marine

characteristic: environment (material)

text: water

characteristic: environmental package

characteristic: event date/time

characteristic: latitude start

characteristic: longitude start

text: Pacific

characteristic: marine region

text: bacterium

characteristic: project name

characteristic: protocol label

characteristic: salinity

characteristic: sampling campaign

text: Kilo Manoa

characteristic: sampling platform

text: Pacific

text: bacterium

text: Station 11, surface


activated sludge

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: activated sludge

tag: Namespace:SCHOOL OF ENVIRONMENTAL SCIENCE AND ENGINEERING, G

characteristic: Submitter Id

text: metagenome

characteristic: organism

text: metagenome

text: sludge 16s


E-MTAB-5313:Sample 1

text: public

text: E-MTAB-5313:Sample 1

tag: Namespace:Chalmers University of Technology, Department of Biology and Biological Engineering

text: ArrayExpress

characteristic: broker name

text: Protocols: Saccharomyces cerevisiae W303 was used throughout the study. Three replicate batch experiments were carried out on ethanol as the only carbon source. Osmostress (final concentration of 0.4 M NaCl) was applied when biomass concentration had increased higher then 1.2 g L-1. Samples for cell dry weight, extracellular metabolites, trehalose and transcriptome analysis were collected just before stress application and 15, 30, 60 and 90 min after. Culture were grown at 30oC in 1.2 L bioreactors (DASGIP, Germany) with working volume of 0.75 L. The temperature, agitation, gassing, pH, and composition of the off gas were monitored and/or controlled using a DasGip monitoring and control system (DasGip, Germany). The stirrer speed was set to 400 rpm, and the aeration rate was 1 volume of gas per volume of fermentation broth per minute (vvm).The pH was controlled at 5.00±0.05 with 2 M KOH and the dissolved oxygen was kept above 30%. The CO2 emission (and residual O2) was monitored from the exhaust gas using the off-gas analyzer GA4 (DASGIP, Germany) , based on zirconium dioxide and a two-beam infrared sensor. Cultivation medium contained 40 g of ethanol, 15 g of (NH4)2SO4, 3 g of KH2PO4, 1.5 g of MgSO4 x 7 H2O, 1 mL of vitamin solution (Usaite et al, 2008), 1 mL of trace metal solution (Usaite et al, 2008), and 50 µL of Antiform 204 (Sigma-Aldrich, USA). Sampling for transcriptome analysis was carried out as follows: biomass was withdrawn from bioreactors into pre-cooled Eppendorf tubes, centrifuged for 22 sec at 4oC at 14 000 rpm and biomass was snap-freezed after decantating the supernatant. The whole sampling process took less than 45 sec. Samples were stored at -80oC. The Illumina TruSeq sample preparation kit v2, with poly-A selection, was used to prepare RNA samples for sequencing.

characteristic: description

text: batch growth on ethanol

characteristic: growth condition

text: Saccharomyces cerevisiae S288c

text: Saccharomyces cerevisiae S288c

text: Saccharomyces cerevisiae S288c

characteristic: strain

text: Sample 1

characteristic: title

type: has member


E-MTAB-5313:Sample 2

text: Chalmers University of Technology, Department of Biology and Biological Engineering

text: public

text: E-MTAB-5313:Sample 2

text: ArrayExpress

text: batch growth on ethanol

text: Saccharomyces cerevisiae S288c

text: Saccharomyces cerevisiae S288c

text: Saccharomyces cerevisiae S288c

text: Sample 2


E-MTAB-5313:Sample 3

text: public

text: E-MTAB-5313:Sample 3

text: ArrayExpress

text: batch growth on ethanol

text: Saccharomyces cerevisiae S288c

text: Saccharomyces cerevisiae S288c

text: Saccharomyces cerevisiae S288c

text: Sample 3


E-MTAB-5313:Sample 4

text: public

text: E-MTAB-5313:Sample 4

text: ArrayExpress

text: batch growth on ethanol

text: Saccharomyces cerevisiae S288c

text: Saccharomyces cerevisiae S288c

text: Saccharomyces cerevisiae S288c

text: Sample 4


E-MTAB-5313:Sample 5

text: public

text: E-MTAB-5313:Sample 5

text: ArrayExpress

text: batch growth on ethanol

text: Saccharomyces cerevisiae S288c

text: Saccharomyces cerevisiae S288c

text: Saccharomyces cerevisiae S288c

text: Sample 5


E-MTAB-5313:Sample 6

text: public

text: E-MTAB-5313:Sample 6

text: ArrayExpress

text: batch growth on ethanol

text: Saccharomyces cerevisiae S288c

text: Saccharomyces cerevisiae S288c

text: Saccharomyces cerevisiae S288c

text: Sample 6


E-MTAB-5313:Sample 7

text: public

text: E-MTAB-5313:Sample 7

text: ArrayExpress

text: batch growth on ethanol

text: Saccharomyces cerevisiae S288c

text: Saccharomyces cerevisiae S288c

text: Saccharomyces cerevisiae S288c

text: Sample 7


E-MTAB-5313:Sample 8

text: public

text: E-MTAB-5313:Sample 8

text: ArrayExpress

text: batch growth on ethanol

text: Saccharomyces cerevisiae S288c

text: Saccharomyces cerevisiae S288c

text: Saccharomyces cerevisiae S288c

text: Sample 8


E-MTAB-5313:Sample 9

text: public

text: E-MTAB-5313:Sample 9

text: ArrayExpress

text: batch growth on ethanol

text: Saccharomyces cerevisiae S288c

text: Saccharomyces cerevisiae S288c

text: Saccharomyces cerevisiae S288c

text: Sample 9


E-MTAB-5313:Sample 10

text: public

text: E-MTAB-5313:Sample 10

text: ArrayExpress

text: batch growth on ethanol

text: Saccharomyces cerevisiae S288c

text: Saccharomyces cerevisiae S288c

text: Saccharomyces cerevisiae S288c

text: Sample 10


E-MTAB-5313:Sample 11

text: public

text: E-MTAB-5313:Sample 11

text: ArrayExpress

text: batch growth on ethanol

text: Saccharomyces cerevisiae S288c

text: Saccharomyces cerevisiae S288c

text: Saccharomyces cerevisiae S288c

text: Sample 11


E-MTAB-5313:Sample 12

text: public

text: E-MTAB-5313:Sample 12

text: ArrayExpress

text: batch growth on ethanol

text: Saccharomyces cerevisiae S288c

text: Saccharomyces cerevisiae S288c

text: Saccharomyces cerevisiae S288c

text: Sample 12


E-MTAB-5313:Sample 13

text: public

text: E-MTAB-5313:Sample 13

text: ArrayExpress

text: batch growth on ethanol

text: Saccharomyces cerevisiae S288c

text: Saccharomyces cerevisiae S288c

text: Saccharomyces cerevisiae S288c

text: Sample 13


E-MTAB-5313:Sample 14

text: public

text: E-MTAB-5313:Sample 14

text: ArrayExpress

text: batch growth on ethanol

text: Saccharomyces cerevisiae S288c

text: Saccharomyces cerevisiae S288c

text: Saccharomyces cerevisiae S288c

text: Sample 14


E-MTAB-5313:Sample 15

text: public

text: E-MTAB-5313:Sample 15

text: ArrayExpress

text: batch growth on ethanol

text: Saccharomyces cerevisiae S288c

text: Saccharomyces cerevisiae S288c

text: Saccharomyces cerevisiae S288c

text: Sample 15


text: French

characteristic: IHMC ethnicity

text: 08=8=Antibiotics/(anti)-infectives, parasitics, microbials

characteristic: IHMC medication code

text: University of Luebeck

text: public

tag: Namespace:University of Luebeck

characteristic: collection date

text: negative

characteristic: elisa test for iga serum antibodies targetting chlamydia trachomatis

text: negative

characteristic: elisa test for igg serum antibodies targetting chlamydia trachomatis

text: human

characteristic: environment (biome)

text: urogenital tract

characteristic: environment (feature)

text: cervix

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

unit: year

characteristic: host age

text: cervix

characteristic: host body site

text: infections of the urogenital tract: Escherichia coli

characteristic: host disease status

text: female

characteristic: host sex

text: human-vaginal

characteristic: human vaginal environmental package

text: MOMP

characteristic: iga serum antibodies targetting specified epitopes of chlamydia trachomatis

text: MOMP; OMP2; HSP60

characteristic: igg serum antibodies targetting specified epitopes of chlamydia trachomatis

text: mimarks-survey

characteristic: investigation type

text: human vaginal metagenome

text: Microbiota in infectious infertility

characteristic: project name

text: human papillomavirus; Chlamydia; Herpes genitalis; fungi

characteristic: reported previous sexually transmitted infections

text: human vaginal metagenome

text: paired-end Miseq

characteristic: sequencing method

text: frequency of sexual intercourse/month: NA

characteristic: sexual activity

text: female sex worker

characteristic: study group

text: Microbiome in infectious infertility


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Luebeck

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: positive

characteristic: elisa test for iga serum antibodies targetting chlamydia trachomatis

text: positive

characteristic: elisa test for igg serum antibodies targetting chlamydia trachomatis

text: human

characteristic: environment (biome)

text: urogenital tract

characteristic: environment (feature)

text: cervical swab

characteristic: environment (material)

text: Germany

text: cervix

text: sexually transmitted infections: Neisseria gonorrhoeae; Mycoplasma genitalium; Mycoplasma hominis

text: female

text: human-vaginal

text: MOMP

text: mimarks-survey

text: human vaginal metagenome

characteristic: organism

text: Microbiota-based analysis reveals specific bacterial traits and a novel diagnostic strategy for infectious infertility

text: human vaginal metagenome

text: paired-end MiSeq

text: female sex workers

text: Microbiome in infectious infertility

characteristic: title

text: no

characteristic: use of antibiotics at the time of sampling


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Hungarian

characteristic: IHMC ethnicity

text: University of Luebeck

text: public

text: condom

characteristic: birth control

text: positive

text: negative

text: human

text: urogenital tract

text: cervical swab

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: cervix

characteristic: host body site

text: sexually transmitted infections: Group B Streptococcus; Escherichia coli; Ureaplasma urealyticum; Mycoplasma hominis

characteristic: host disease status

text: female

characteristic: host sex

text: human-vaginal

characteristic: human vaginal environmental package

text: MOMP; TARP; CPAF

characteristic: iga serum antibodies targetting specified epitopes of chlamydia trachomatis

text: MOMP; OMP2; TARP; CPAF; HSP60

characteristic: igg serum antibodies targetting specified epitopes of chlamydia trachomatis

text: mimarks-survey

characteristic: investigation type

text: human vaginal metagenome

characteristic: project name

text: Chlamydia

characteristic: reported previous sexually transmitted infections

text: human vaginal metagenome

text: paired-end MiSeq

characteristic: sequencing method

text: frequency of sexual intercourse/month: 130

characteristic: sexual activity

text: female sex worker

characteristic: study group

text: Microbiome in infectious infertility

text: no


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Bulgarian

characteristic: IHMC ethnicity

text: University of Luebeck

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: condom

characteristic: birth control

characteristic: collection date

text: negative

characteristic: elisa test for iga serum antibodies targetting chlamydia trachomatis

text: negative

characteristic: elisa test for igg serum antibodies targetting chlamydia trachomatis

text: human

characteristic: environment (biome)

text: urogenital tract

characteristic: environment (feature)

text: cervical swab

characteristic: environment (material)

text: Germany

text: cervix

text: sexually transmitted infections: Mycoplasma hominis

text: female

text: human-vaginal

text: CPAF

text: MOMP; OMP2; TARP; CPAF

text: mimarks-survey

text: human vaginal metagenome

characteristic: organism

text: human vaginal metagenome

text: paired-end MiSeq

text: frequency of sexual intercourse/month: 104

text: female sex worker

text: Microbiome in infectious infertility

characteristic: title

text: no

characteristic: use of antibiotics at the time of sampling


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: German

characteristic: IHMC ethnicity

text: University of Luebeck

text: public

text: condom; oral contraception

text: positive

text: negative

text: human

text: urogenital tract

text: cervical swab

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: cervix

characteristic: host body site

text: sexually transmitted infections: Candida albicans; Escherichia coli

characteristic: host disease status

text: female

characteristic: host sex

text: human-vaginal

characteristic: human vaginal environmental package

text: TARP

characteristic: iga serum antibodies targetting specified epitopes of chlamydia trachomatis

text: MOMP; OMP2; TARP; CPAF

characteristic: igg serum antibodies targetting specified epitopes of chlamydia trachomatis

text: mimarks-survey

characteristic: investigation type

text: human vaginal metagenome

characteristic: project name

text: Neisseria gonorrhoeae; fungi

characteristic: reported previous sexually transmitted infections

text: human vaginal metagenome

text: paired-end MiSeq

characteristic: sequencing method

text: frequency of sexual intercourse/month: 30

characteristic: sexual activity

text: female sex worker

characteristic: study group

text: Microbiome in infectious infertility

text: no


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: British

characteristic: IHMC ethnicity

text: University of Luebeck

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: oral contraception

characteristic: birth control

characteristic: collection date

text: negative

characteristic: elisa test for iga serum antibodies targetting chlamydia trachomatis

text: negative

characteristic: elisa test for igg serum antibodies targetting chlamydia trachomatis

text: human

characteristic: environment (biome)

text: urogenital tract

characteristic: environment (feature)

text: cervical swab

characteristic: environment (material)

text: Germany

text: cervix

text: female

text: human-vaginal

text: MOMP

text: mimarks-survey

text: human vaginal metagenome

characteristic: organism

text: fungi

text: human vaginal metagenome

text: paired-end MiSeq

text: frequency of sexual intercourse/month: 3.5

text: female sex worker

text: Microbiome in infectious infertility

characteristic: title

text: no

characteristic: use of antibiotics at the time of sampling


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Bulgarian

characteristic: IHMC ethnicity

text: University of Luebeck

text: public

text: condom

text: negative

text: positive

text: human

text: urogenital tract

text: cervical swab

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: cervix

characteristic: host body site

text: sexually transmitted infections: Ureaplasma urealyticum; Mycoplasma hominis

characteristic: host disease status

text: female

characteristic: host sex

text: human-vaginal

characteristic: human vaginal environmental package

text: mimarks-survey

characteristic: investigation type

text: human vaginal metagenome

characteristic: project name

text: human vaginal metagenome

text: paired-end MiSeq

characteristic: sequencing method

text: frequency of sexual intercourse/month: 156

characteristic: sexual activity

text: female sex worker

characteristic: study group

text: Microbiome in infectious infertility

text: no


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Bulgarian

text: University of Luebeck

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: condom

characteristic: birth control

characteristic: collection date

text: negative

characteristic: elisa test for iga serum antibodies targetting chlamydia trachomatis

text: positive

characteristic: elisa test for igg serum antibodies targetting chlamydia trachomatis

text: human

characteristic: environment (biome)

text: urogenital tract

characteristic: environment (feature)

text: cervical swab

characteristic: environment (material)

text: Germany

text: cervix

text: sexually transmitted infections: Candida albicans; Ureaplasma urealyticum

text: female

text: human-vaginal

text: mimarks-survey

text: human vaginal metagenome

characteristic: organism

text: Hepatitis B or C

characteristic: reported previous sexually transmitted infections

text: human vaginal metagenome

text: paired-end MiSeq

text: female sex worker

text: Microbiome in infectious infertility

characteristic: title

text: no

characteristic: use of antibiotics at the time of sampling


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Thai

characteristic: IHMC ethnicity

text: University of Luebeck

characteristic: INSDC center name

text: public

text: condom; oral contraception

text: positive

text: positive

text: human

text: urogenital tract

text: cervical swab

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: cervix

characteristic: host body site

text: sexually transmitted infections: Ureaplasma urealyticum

characteristic: host disease status

text: female

characteristic: host sex

text: human-vaginal

characteristic: human vaginal environmental package

text: MOMP; OMP2; TARP; CPAF

characteristic: igg serum antibodies targetting specified epitopes of chlamydia trachomatis

text: mimarks-survey

characteristic: investigation type

text: human vaginal metagenome

characteristic: project name

text: human vaginal metagenome

text: paired-end MiSeq

characteristic: sequencing method

characteristic: sexual activity

text: female sex worker

characteristic: study group

text: Microbiome in infectious infertility

text: no


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Thai

text: University of Luebeck

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: condom; oral contraception

characteristic: birth control

characteristic: collection date

text: negative

characteristic: elisa test for iga serum antibodies targetting chlamydia trachomatis

text: negative

characteristic: elisa test for igg serum antibodies targetting chlamydia trachomatis

text: human

characteristic: environment (biome)

text: urogenital tract

characteristic: environment (feature)

text: cervical swab

characteristic: environment (material)

text: Germany

text: cervix

text: female

text: human-vaginal

text: TARP; CPAF

text: mimarks-survey

text: human vaginal metagenome

characteristic: organism

text: human vaginal metagenome

text: paired-end MiSeq

text: female sex worker

text: Microbiome in infectious infertility

characteristic: title

text: no

characteristic: use of antibiotics at the time of sampling


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Thai

characteristic: IHMC ethnicity

text: University of Luebeck

characteristic: INSDC center name

text: public

text: condom; oral contraception

text: positive

text: positive

text: human

text: urogenital tract

text: cervical swab

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: cervix

characteristic: host body site

text: female

characteristic: host sex

text: human-vaginal

characteristic: human vaginal environmental package

text: CPAF

characteristic: iga serum antibodies targetting specified epitopes of chlamydia trachomatis

text: MOMP; OMP2; TARP; CPAF

characteristic: igg serum antibodies targetting specified epitopes of chlamydia trachomatis

text: mimarks-survey

characteristic: investigation type

text: human vaginal metagenome

characteristic: project name

text: human vaginal metagenome

text: paired-end MiSeq

characteristic: sequencing method

text: frequency of sexual intercourse/month: 10

characteristic: sexual activity

text: female sex worker

characteristic: study group

text: Microbiome in infectious infertility

text: no


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Thai

text: University of Luebeck

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: condom

characteristic: birth control

characteristic: collection date

text: negative

characteristic: elisa test for iga serum antibodies targetting chlamydia trachomatis

text: negative

characteristic: elisa test for igg serum antibodies targetting chlamydia trachomatis

text: human

characteristic: environment (biome)

text: urogenital tract

characteristic: environment (feature)

text: cervical swab

characteristic: environment (material)

text: Germany

text: cervix

characteristic: host disease status

text: female

text: human-vaginal

text: CPAF

text: TARP; CPAF; HSP60

text: mimarks-survey

text: human vaginal metagenome

characteristic: organism

text: Neisseria gonorrhoeae; fungi

characteristic: reported previous sexually transmitted infections

text: human vaginal metagenome

text: paired-end MiSeq

text: frequency of sexual intercourse/month: 5.5

text: female sex worker

text: Microbiome in infectious infertility

characteristic: title

text: no

characteristic: use of antibiotics at the time of sampling


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Hungarian

characteristic: IHMC ethnicity

text: University of Luebeck

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: oral contraception

text: negative

text: positive

text: human

text: urogenital tract

text: cervical swab

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: cervix

characteristic: host body site

text: female

characteristic: host sex

text: human-vaginal

characteristic: human vaginal environmental package

text: mimarks-survey

characteristic: investigation type

text: human vaginal metagenome

characteristic: project name

text: fungi

text: human vaginal metagenome

text: paired-end MiSeq

characteristic: sequencing method

characteristic: sexual activity

text: female sex worker

characteristic: study group

text: Microbiome in infectious infertility

text: no


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Polish

text: University of Luebeck

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: condom; oral contraception

characteristic: birth control

characteristic: collection date

text: positive

characteristic: elisa test for iga serum antibodies targetting chlamydia trachomatis

text: positive

characteristic: elisa test for igg serum antibodies targetting chlamydia trachomatis

text: human

characteristic: environment (biome)

text: urogenital tract

characteristic: environment (feature)

text: cervical swab

characteristic: environment (material)

text: Germany

text: cervix

text: female

text: human-vaginal

text: OMP2; TARP; CPAF

characteristic: igg serum antibodies targetting specified epitopes of chlamydia trachomatis

text: mimarks-survey

text: human vaginal metagenome

characteristic: organism

text: Chlamydia; fungi

characteristic: reported previous sexually transmitted infections

text: human vaginal metagenome

text: paired-end MiSeq

text: female sex worker

text: Microbiome in infectious infertility

characteristic: title

text: no

characteristic: use of antibiotics at the time of sampling


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Bulgarian

characteristic: IHMC ethnicity

text: University of Luebeck

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: condom

text: negative

text: positive

text: human

text: urogenital tract

text: cervical swab

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: cervix

characteristic: host body site

text: sexually transmitted infections: Candida albicans; Mycoplasma hominis

characteristic: host disease status

text: female

characteristic: host sex

text: human-vaginal

characteristic: human vaginal environmental package

text: mimarks-survey

characteristic: investigation type

text: human vaginal metagenome

characteristic: project name

text: human vaginal metagenome

text: paired-end MiSeq

characteristic: sequencing method

text: frequency of sexual intercourse/month: 78

characteristic: sexual activity

text: female sex worker

characteristic: study group

text: Microbiome in infectious infertility

text: no


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Bulgarian

text: University of Luebeck

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: condom

characteristic: birth control

characteristic: collection date

text: positive

characteristic: elisa test for iga serum antibodies targetting chlamydia trachomatis

text: positive

characteristic: elisa test for igg serum antibodies targetting chlamydia trachomatis

text: human

characteristic: environment (biome)

text: urogenital tract

characteristic: environment (feature)

text: cervical swab

characteristic: environment (material)

text: Germany

text: cervix

text: sexually transmitted infections: Candida albicans; Ureaplasma urealyticum; Mycoplasma genitalium

text: female

text: human-vaginal

text: MOMP; TARP; CPAF

characteristic: iga serum antibodies targetting specified epitopes of chlamydia trachomatis

text: MOMP; OMP2; TARP; CPAF; HSP60

characteristic: igg serum antibodies targetting specified epitopes of chlamydia trachomatis

text: mimarks-survey

text: human vaginal metagenome

characteristic: organism

text: human vaginal metagenome

text: paired-end MiSeq

text: frequency of sexual intercourse/month: 65

text: female sex worker

text: Microbiome in infectious infertility

characteristic: title

text: no

characteristic: use of antibiotics at the time of sampling


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Portuguese

characteristic: IHMC ethnicity

text: University of Luebeck

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: condom

text: negative

text: negative

text: human

text: urogenital tract

text: cervical swab

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: cervix

characteristic: host body site

text: female

characteristic: host sex

text: human-vaginal

characteristic: human vaginal environmental package

text: mimarks-survey

characteristic: investigation type

text: human vaginal metagenome

text: Microbiota-based analysis reveals specific bacterial traits and a novel diagnostic strategy for infectious infertility

characteristic: project name

text: human vaginal metagenome

text: paired-end MiSeq

characteristic: sequencing method

text: frequency of sexual intercourse/month: 16

characteristic: sexual activity

text: female sex worker

characteristic: study group

text: Microbiome in infectious infertility

text: no


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Hungarian

text: University of Luebeck

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: condom

characteristic: birth control

characteristic: collection date

text: positive

characteristic: elisa test for iga serum antibodies targetting chlamydia trachomatis

text: positive

characteristic: elisa test for igg serum antibodies targetting chlamydia trachomatis

text: human

characteristic: environment (biome)

text: urogenital tract

characteristic: environment (feature)

text: cervical swab

characteristic: environment (material)

text: Germany

text: cervix

text: sexually transmitted infections: Gardnerella vaginalis; Neisseria gonorrhoeae; Ureaplasma urealyticum; Mycoplasma hominis

characteristic: host disease status

text: female

text: human-vaginal

text: TARP; CPAF

characteristic: igg serum antibodies targetting specified epitopes of chlamydia trachomatis

text: mimarks-survey

text: human vaginal metagenome

characteristic: organism

text: human vaginal metagenome

text: paired-end MiSeq

text: frequency of sexual intercourse/month: NA

text: female sex worker

text: Microbiome in infectious infertility

characteristic: title

text: no

characteristic: use of antibiotics at the time of sampling


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Hungarian

characteristic: IHMC ethnicity

text: University of Luebeck

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: condom

text: positive

text: positive

text: human

text: urogenital tract

text: cervical swab

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: cervix

characteristic: host body site

text: sexually transmitted infections: Chlamydia trachomatis; Mycoplasma hominis

text: female

characteristic: host sex

text: human-vaginal

characteristic: human vaginal environmental package

text: OMP2; CPAF

text: mimarks-survey

characteristic: investigation type

text: human vaginal metagenome

characteristic: project name

text: human vaginal metagenome

text: paired-end MiSeq

characteristic: sequencing method

characteristic: sexual activity

text: female sex worker

characteristic: study group

text: Microbiome in infectious infertility

text: no


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: German

text: University of Luebeck

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: positive

characteristic: elisa test for iga serum antibodies targetting chlamydia trachomatis

text: positive

characteristic: elisa test for igg serum antibodies targetting chlamydia trachomatis

text: human

characteristic: environment (biome)

text: urogenital tract

characteristic: environment (feature)

text: cervical swab

characteristic: environment (material)

text: Germany

text: cervix

text: sexually transmitted infections: Escherichia coli

characteristic: host disease status

text: female

text: human-vaginal

text: MOMP; OMP2; TARP; CPAF

characteristic: iga serum antibodies targetting specified epitopes of chlamydia trachomatis

text: MOMP; OMP2; TARP; CPAF

characteristic: igg serum antibodies targetting specified epitopes of chlamydia trachomatis

text: mimarks-survey

text: human vaginal metagenome

characteristic: organism

text: human vaginal metagenome

text: paired-end MiSeq

text: frequency of sexual intercourse/month: 8

text: female sex worker

text: Microbiome in infectious infertility

characteristic: title

text: no

characteristic: use of antibiotics at the time of sampling


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Russian

characteristic: IHMC ethnicity

text: University of Luebeck

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: condom

characteristic: birth control

text: negative

text: positive

text: human

text: urogenital tract

text: cervical swab

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: cervix

characteristic: host body site

text: female

characteristic: host sex

text: human-vaginal

characteristic: human vaginal environmental package

text: mimarks-survey

characteristic: investigation type

text: human vaginal metagenome

characteristic: project name

text: Neisseria gonorrhoeae; fungi; Hepatitis B or C

characteristic: reported previous sexually transmitted infections

text: human vaginal metagenome

text: paired-end MiSeq

characteristic: sequencing method

text: frequency of sexual intercourse/month: 7

characteristic: sexual activity

text: female sex worker

characteristic: study group

text: Microbiome in infectious infertility

text: no


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: German

characteristic: IHMC ethnicity

text: University of Luebeck

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: condom; oral contraception

characteristic: collection date

text: negative

characteristic: elisa test for iga serum antibodies targetting chlamydia trachomatis

text: positive

characteristic: elisa test for igg serum antibodies targetting chlamydia trachomatis

text: human

characteristic: environment (biome)

text: urogenital tract

characteristic: environment (feature)

text: cervical swab

characteristic: environment (material)

text: Germany

text: cervix

text: female

text: human-vaginal

text: MOMP; OMP2

characteristic: igg serum antibodies targetting specified epitopes of chlamydia trachomatis

text: mimarks-survey

text: human vaginal metagenome

characteristic: organism

text: Chlamydia; fungi

text: human vaginal metagenome

text: paired-end MiSeq

text: frequency of sexual intercourse/month: 0

text: female sex worker

text: Microbiome in infectious infertility

characteristic: title

text: no

characteristic: use of antibiotics at the time of sampling


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Hungarian

text: University of Luebeck

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: condom

characteristic: birth control

text: negative

text: positive

text: human

text: urogenital tract

text: cervical swab

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: cervix

characteristic: host body site

text: sexually transmitted infections: Chlamydia trachomatis; Ureaplasma urealyticum

characteristic: host disease status

text: female

characteristic: host sex

text: human-vaginal

characteristic: human vaginal environmental package

text: MOMP; OMP2

text: mimarks-survey

characteristic: investigation type

text: human vaginal metagenome

characteristic: project name

text: human vaginal metagenome

text: paired-end MiSeq

characteristic: sequencing method

characteristic: sexual activity

text: female sex worker

characteristic: study group

text: Microbiome in infectious infertility

text: no


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Thai

characteristic: IHMC ethnicity

text: University of Luebeck

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: condom

characteristic: collection date

text: positive

characteristic: elisa test for iga serum antibodies targetting chlamydia trachomatis

text: negative

characteristic: elisa test for igg serum antibodies targetting chlamydia trachomatis

text: human

characteristic: environment (biome)

text: urogenital tract

characteristic: environment (feature)

text: cervical swab

characteristic: environment (material)

text: Germany

text: cervix

text: sexually transmitted infections: Ureaplasma urealyticum

text: female

text: human-vaginal

text: TARP; CPAF; HSP60

characteristic: iga serum antibodies targetting specified epitopes of chlamydia trachomatis

text: MOMP; OMP2; TARP; CPAF; HSP60

characteristic: igg serum antibodies targetting specified epitopes of chlamydia trachomatis

text: mimarks-survey

text: human vaginal metagenome

characteristic: organism

text: human vaginal metagenome

text: paired-end MiSeq

text: frequency of sexual intercourse/month: 4

text: female sex worker

text: Microbiome in infectious infertility

characteristic: title

text: no

characteristic: use of antibiotics at the time of sampling


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: USA-American

text: University of Luebeck

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: condom

characteristic: birth control

text: negative

text: positive

text: human

text: urogenital tract

text: cervical swab

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: cervix

characteristic: host body site

text: sexually transmitted infections: Candida albicans

characteristic: host disease status

text: female

characteristic: host sex

text: human-vaginal

characteristic: human vaginal environmental package

text: mimarks-survey

characteristic: investigation type

text: human vaginal metagenome

characteristic: project name

text: human vaginal metagenome

text: paired-end MiSeq

characteristic: sequencing method

characteristic: sexual activity

text: female sex worker

characteristic: study group

text: Microbiome in infectious infertility

text: no


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Bulgarian

characteristic: IHMC ethnicity

text: University of Luebeck

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: condom

characteristic: collection date

text: negative

characteristic: elisa test for iga serum antibodies targetting chlamydia trachomatis

text: negative

characteristic: elisa test for igg serum antibodies targetting chlamydia trachomatis

text: human

characteristic: environment (biome)

text: urogenital tract

characteristic: environment (feature)

text: cervical swab

characteristic: environment (material)

text: Germany

text: cervix

text: sexually transmitted infections: Group B Streptococcus

text: female

text: human-vaginal

text: CPAF

characteristic: igg serum antibodies targetting specified epitopes of chlamydia trachomatis

text: mimarks-survey

text: human vaginal metagenome

characteristic: organism

text: human vaginal metagenome

text: paired-end MiSeq

text: frequency of sexual intercourse/month: 30

text: female sex worker

text: Microbiome in infectious infertility

characteristic: title

text: no

characteristic: use of antibiotics at the time of sampling


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Canadian

text: University of Luebeck

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: oral contraception

characteristic: birth control

text: negative

text: positive

text: human

text: urogenital tract

text: cervical swab

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: cervix

characteristic: host body site

characteristic: host disease status

text: female

characteristic: host sex

text: human-vaginal

characteristic: human vaginal environmental package

text: MOMP; OMP2

text: mimarks-survey

characteristic: investigation type

text: human vaginal metagenome

characteristic: project name

text: human papillomavirus; Chlamydia

characteristic: reported previous sexually transmitted infections

text: human vaginal metagenome

text: paired-end MiSeq

characteristic: sequencing method

text: frequency of sexual intercourse/month: 10

characteristic: sexual activity

text: female sex worker

characteristic: study group

text: Microbiome in infectious infertility

text: no


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Thai

characteristic: IHMC ethnicity

text: University of Luebeck

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: condom; oral contraception

characteristic: collection date

text: positive

characteristic: elisa test for iga serum antibodies targetting chlamydia trachomatis

text: positive

characteristic: elisa test for igg serum antibodies targetting chlamydia trachomatis

text: human

characteristic: environment (biome)

text: urogenital tract

characteristic: environment (feature)

text: cervical swab

characteristic: environment (material)

text: Germany

text: cervix

text: sexually transmitted infections: Gardnerella vaginalis; Chlamydia trachomatis; Ureaplasma urealyticum

text: female

text: human-vaginal

text: MOMP; TARP

characteristic: iga serum antibodies targetting specified epitopes of chlamydia trachomatis

text: MOMP; OMP2; TARP; CPAF

characteristic: igg serum antibodies targetting specified epitopes of chlamydia trachomatis

text: mimarks-survey

text: human vaginal metagenome

characteristic: organism

text: Microbiota-based analysis reveals specific bacterial traits and a novel diagnostic strategy for infectious infertility

text: human vaginal metagenome

text: paired-end MiSeq

text: female sex worker

text: Microbiome in infectious infertility

characteristic: title

text: no

characteristic: use of antibiotics at the time of sampling