characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: J CRAIG VENTER INSTITUTE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: ammonia

characteristic: collection date

text: marine metagenome

characteristic: common name

text: Sample 88B, Bulk 0.2µm fraction

characteristic: description

characteristic: dissolved organic carbon

text: epipelagic layer

characteristic: environment (biome)

text: research facility

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: marine metagenome

characteristic: organism

text: marine metagenome

text: illumina hiseq

characteristic: title


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: J CRAIG VENTER INSTITUTE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:J CRAIG VENTER INSTITUTE

unit: µmol/L

text: marine metagenome

text: Sample 88B, Bulk-sludge 3µm - 0.2µm fraction

unit: mg/L

unit: µmol/kg

characteristic: dissolved oxygen

text: epipelagic layer

text: research facility

text: sludge

unit: nM/h

characteristic: enzymatic activity (chitenase)

characteristic: enzymatic activity (oleate lipase)

characteristic: enzymatic activity (phosphatase)

characteristic: enzymatic activity (protease)

characteristic: enzymatic activity (stearate lipase)

text: USA

unit: DD

text: Hydraulics Lab, Scripps Institute of Oceanography, La Jolla, CA, USA

text: miscellaneous natural or artificial environment

characteristic: miscellaneous environmental package

characteristic: nitrate

characteristic: nitrite

text: marine metagenome

unit: µg/L

characteristic: particulate organic carbon

characteristic: particulate organic nitrogen

characteristic: phosphate

text: marine metagenome

text: illumina hiseq

characteristic: sequencing method

characteristic: silicate

unit: µm

characteristic: size fraction lower threshold

unit: ºC

characteristic: temperature


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: J CRAIG VENTER INSTITUTE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: marine metagenome

characteristic: common name

text: negative control

characteristic: description

text: control

characteristic: environment (biome)

text: research facility

characteristic: environment (feature)

text: control

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: marine metagenome

characteristic: organism

text: marine metagenome

text: illumina hiseq

text: mbla

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: J CRAIG VENTER INSTITUTE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Merged set of all CAICE aerosolization project samples

text: marine metagenome

text: marine metagenome

text: Combined CAICE aerosolization project samples


ChIP-Seq, MG1655_Mock

text: KAIST

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ChIP-Seq, MG1655_Mock

characteristic: Submitter Id

text: Chromatin-immunoprecipitation sequencing of Sigma factor 70 in MG1655 and eMS57.

text: Escherichia coli str. K-12 substr. MG1655

text: ChIP-Seq of RpoD, MG1655_Mock


ChIP-Seq, MG1655_Rep1

text: KAIST

text: public

text: ChIP-Seq, MG1655_Rep1

characteristic: description

text: ChIP-Seq of RpoD, MG1655_Rep1


ChIP-Seq, MG1655_Rep2

text: KAIST

text: public

text: ChIP-Seq, MG1655_Rep2

text: ChIP-Seq of RpoD, MG1655_Rep2


ChIP-Seq, eMS57_Mock

text: KAIST

text: public

text: ChIP-Seq, eMS57_Mock

text: ChIP-Seq of RpoD, eMS57_Mock


ChIP-Seq, eMS57_Rep1

text: KAIST

text: public

text: ChIP-Seq, eMS57_Rep1

text: ChIP-Seq of RpoD, eMS57_Rep1


ChIP-Seq, eMS57_Rep2

text: KAIST

text: public

text: ChIP-Seq, eMS57_Rep2

text: ChIP-Seq of RpoD, eMS57_Rep2


text: Homo sapiens

characteristic: ArrayExpress-SPECIES

text: Human Cell line (HEK293)

text: SC

text: public

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

characteristic: subject id


text: public

tag: Namespace:DST/NRF Centre of Excellence for Biomedical TB research, SAMRC Centre for TB Research

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis LAM


text: DST/NRF Centre of Excellence for Biomedical TB research, SAMRC Centre for TB Research

text: public

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis LAM


E-MTAB-5807:DMSO treated cells_control

text: INSERM U910 Marseille

text: public

text: E-MTAB-5807:DMSO treated cells_control

tag: Namespace:INSERM U910  Marseille

text: ArrayExpress

characteristic: broker name

text: fibroblast derived cell line

characteristic: cell line

text: human

text: Protocols: DMEM (15% FBS, 1% glutamin) medium, 37°C, 5% CO2 HGPS fibroblasts treated with DMSO (vehicle control) or with MG132 for 6 hours rneasy mini kit TruSeq Stranded mRNA

text: Hutchinson-Gilford progeria syndrome

characteristic: disease

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: male

characteristic: sex

text: DMSO treated cells_control

type: has member


E-MTAB-5807:MG132 treated cells

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: INSERM U910 Marseille

text: public

text: E-MTAB-5807:MG132 treated cells

text: ArrayExpress

text: fibroblast derived cell line

text: human

text: Hutchinson-Gilford progeria syndrome

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Homo sapiens

text: male

text: MG132 treated cells

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:Wolfson Centre for Age-Related Diseases, King's College London

unit: day

characteristic: age

text: ArrayExpress

text: house mouse

text: Protocols: 4-day old pups from heterozygote x heterozygote matings were collected and culled by decapitation. The head was bisected and the brain removed. Half heads were put in RNAlater and the organs of Corti dissected out, separated from modiolus and lateral wall, and put in fresh RNAlater on ice. RNA was extracted using the QIAgen RNeasy kit with QIAshredder columns or the Lexogen SPLIT kit. Strand-specific libraries were prepared using the NuGEN Ovation Mouse RNA-Seq System 1-16 kit.

text: Mir182 knockout allele

characteristic: genetic modification

text: homozygous knockout of miR-183

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: spiral organ of cochlea

characteristic: organism part

text: Mus musculus

text: male

characteristic: strain


text: Wolfson Centre for Age-Related Diseases, King's College London

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

characteristic: description

text: Mir182 knockout allele

text: homozygous knockout of miR-183

text: Mus musculus

text: Mus musculus

text: spiral organ of cochlea

text: Mus musculus

text: male


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: ArrayExpress

text: house mouse

text: Mir182 knockout allele

text: homozygous knockout of miR-183

text: Mus musculus

characteristic: organism

text: Mus musculus

text: spiral organ of cochlea

text: Mus musculus

text: female

characteristic: sex

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: age

text: ArrayExpress

text: house mouse

text: Mir182 knockout allele

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: spiral organ of cochlea

text: Mus musculus

text: male


characteristic: INSDC last update

text: public

text: ArrayExpress

text: house mouse

text: Mir182 knockout allele

characteristic: genetic modification

text: wild type genotype

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: spiral organ of cochlea

characteristic: organism part

text: Mus musculus

text: female

characteristic: strain


text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: knockout of miR-183 and miR-96

text: homozygous knockout of miR-183 and miR-96

text: Mus musculus

text: Mus musculus

text: spiral organ of cochlea

text: Mus musculus

text: male


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: ArrayExpress

text: house mouse

characteristic: description

text: knockout of miR-183 and miR-96

text: Mus musculus

characteristic: organism

text: Mus musculus

text: spiral organ of cochlea

text: Mus musculus

text: female

characteristic: sex


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ArrayExpress

text: house mouse

text: knockout of miR-183 and miR-96

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: spiral organ of cochlea

text: Mus musculus

text: male

characteristic: title


characteristic: INSDC last update

text: public

characteristic: age

text: ArrayExpress

text: house mouse

text: knockout of miR-183 and miR-96

characteristic: genetic modification

text: wild type genotype

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: spiral organ of cochlea

characteristic: organism part

text: Mus musculus

text: female


text: APC Microbiome Institute

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:APC Microbiome Institute

characteristic: Submitter Id

characteristic: collection date

text: Norway rat

text: material anatomical entity

characteristic: environment (biome)

text: organism substance

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: Rattus norvegicus

text: Fecal microbiota variation across the lifespan of the healthy laboratory rat

characteristic: project name

text: Rattus norvegicus

text: MiSeq

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CRI-FEM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Illumina MiSeq samples of Potentilla micrantha genome

characteristic: description

text: Serbia

text: Potentilla micrantha

characteristic: organism

text: Potentilla micrantha

text: young life

characteristic: tissue type

text: Potentilla micrantha genome sequencing

characteristic: title


text: CBMSO

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: chicken

characteristic: common name

text: Identify molecules that can differentially participate in the formation of rostral placodes

text: Gallus gallus

text: Gallus gallus

text: Chicken rostral placodes


text: TUM

text: public

characteristic: collection date

text: human

text: Normal

characteristic: delivery

text: Feces from 1 month old infant

text: feces

characteristic: environment (biome)

text: feces

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: F

characteristic: feeding

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: group

unit: month

characteristic: host age

text: feces

characteristic: host body product

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: Homo sapiens

characteristic: project name

text: Homo sapiens

text: Illumina


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: TUM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: Caesarean

text: Feces from 1 month old infant

characteristic: description

text: feces

text: feces

text: feces

text: F

text: Germany

text: feces

text: human-gut

text: metagenome

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Illumina

characteristic: sequencing method

characteristic: title


text: TUM

text: public

characteristic: collection date

text: human

text: Normal

characteristic: delivery

text: Feces from 1 month old infant

text: feces

characteristic: environment (biome)

text: feces

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: B

characteristic: feeding

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: group

characteristic: host age

text: feces

characteristic: host body product

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: Homo sapiens

text: Homo sapiens

text: Illumina


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: TUM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: Caesarean

text: Feces from 1 month old infant

characteristic: description

text: feces

text: feces

text: feces

text: B

text: Germany

text: feces

text: human-gut

text: metagenome

text: Homo sapiens

characteristic: organism

characteristic: project name

text: Homo sapiens

text: Illumina

characteristic: sequencing method


text: TUM

text: public

characteristic: collection date

text: human

text: Normal

characteristic: delivery

text: Feces from 3 month old infant

text: feces

characteristic: environment (biome)

text: feces

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: F

characteristic: feeding

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: group

characteristic: host age

text: feces

characteristic: host body product

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: Homo sapiens

text: Homo sapiens

text: Illumina

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: TUM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: Caesarean

text: Feces from 3 month old infant

characteristic: description

text: feces

text: feces

text: feces

text: F

text: Germany

text: feces

text: human-gut

text: metagenome

characteristic: investigation type

text: Homo sapiens

characteristic: organism

characteristic: project name

text: Homo sapiens

text: Illumina


text: TUM

text: public

characteristic: collection date

text: human

text: Normal

characteristic: delivery

text: Feces from 3 month old infant

text: feces

characteristic: environment (biome)

text: feces

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: B

characteristic: feeding

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: group

characteristic: host age

text: feces

characteristic: host body product

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: Homo sapiens

text: Homo sapiens

text: Illumina

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: TUM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: Caesarean

text: Feces from 3 month old infant

characteristic: description

text: feces

text: feces

text: feces

text: B

text: Germany

text: feces

text: human-gut

text: metagenome

characteristic: investigation type

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Illumina

characteristic: title


text: TUM

text: public

characteristic: collection date

text: human

text: Normal

characteristic: delivery

text: Feces from 5 month old infant

text: feces

characteristic: environment (biome)

text: feces

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: F

characteristic: feeding

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: group

characteristic: host age

text: feces

characteristic: host body product

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: Homo sapiens

characteristic: project name

text: Homo sapiens

text: Illumina


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: TUM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: Caesarean

text: Feces from 5 month old infant

characteristic: description

text: feces

text: feces

text: feces

text: F

text: Germany

text: feces

text: human-gut

text: metagenome

characteristic: investigation type

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Illumina

characteristic: sequencing method


text: TUM

text: public

characteristic: collection date

text: human

text: Normal

characteristic: delivery

text: Feces from 5 month old infant

text: feces

characteristic: environment (biome)

text: feces

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: B

characteristic: feeding

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: group

characteristic: host age

text: feces

characteristic: host body product

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: Homo sapiens

text: Homo sapiens

text: Illumina

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: TUM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: Caesarean

text: Feces from 5 month old infant

characteristic: description

text: feces

text: feces

text: feces

text: B

text: Germany

text: feces

text: human-gut

text: metagenome

characteristic: investigation type

text: Homo sapiens

characteristic: organism

characteristic: project name

text: Homo sapiens

text: Illumina


text: TUM

text: public

characteristic: collection date

text: human

text: Normal

characteristic: delivery

text: Feces from 7 month old infant

text: feces

characteristic: environment (biome)

text: feces

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: F

characteristic: feeding

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: group

characteristic: host age

text: feces

characteristic: host body product

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: Homo sapiens

text: Homo sapiens

text: Illumina

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: TUM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: Caesarean

text: Feces from 7 month old infant

characteristic: description

text: feces

text: feces

text: feces

text: F

text: Germany

text: feces

text: human-gut

text: metagenome

characteristic: investigation type

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Illumina

characteristic: title


text: TUM

text: public

characteristic: collection date

text: human

text: Normal

characteristic: delivery

text: Feces from 7 month old infant

text: feces

characteristic: environment (biome)

text: feces

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: B

characteristic: feeding

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: group

characteristic: host age

text: feces

characteristic: host body product

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: Homo sapiens

characteristic: project name

text: Homo sapiens

text: Illumina


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: TUM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: Caesarean

text: Feces from 7 month old infant

characteristic: description

text: feces

text: feces

text: feces

text: B

text: Germany

text: feces

text: human-gut

text: metagenome

characteristic: investigation type

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Illumina

characteristic: sequencing method


text: TUM

text: public

characteristic: collection date

text: human

text: Normal

characteristic: delivery

text: Feces from 9 month old infant

text: feces

characteristic: environment (biome)

text: feces

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: F

characteristic: feeding

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: group

characteristic: host age

text: feces

characteristic: host body product

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: Homo sapiens

text: Homo sapiens

text: Illumina

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: TUM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: Caesarean

text: Feces from 9 month old infant

characteristic: description

text: feces

text: feces

text: feces

text: F

text: Germany

text: feces

text: human-gut

text: metagenome

characteristic: investigation type

text: Homo sapiens

characteristic: organism

characteristic: project name

text: Homo sapiens

text: Illumina


text: TUM

text: public

characteristic: collection date

text: human

text: Normal

characteristic: delivery

text: Feces from 9 month old infant

text: feces

characteristic: environment (biome)

text: feces

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: B

characteristic: feeding

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: group

characteristic: host age

text: feces

characteristic: host body product

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: Homo sapiens

text: Homo sapiens

text: Illumina

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: TUM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: Normal

text: Feces from 9 month old infant

characteristic: description

text: feces

text: feces

text: feces

text: BF

text: Germany

text: feces

text: human-gut

text: metagenome

characteristic: investigation type

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Illumina

characteristic: title


text: TUM

text: public

characteristic: collection date

text: human

text: Caesarean

characteristic: delivery

text: Feces from 9 month old infant

text: feces

characteristic: environment (biome)

text: feces

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: B

characteristic: feeding

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: group

characteristic: host age

text: feces

characteristic: host body product

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: Homo sapiens

characteristic: project name

text: Homo sapiens

text: Illumina


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: TUM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: Caesarean

text: Feces from 9 month old infant

characteristic: description

text: feces

text: feces

text: feces

text: BF

text: Germany

text: feces

text: human-gut

text: metagenome

characteristic: investigation type

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Illumina

characteristic: sequencing method


text: TUM

text: public

characteristic: collection date

text: human

text: Normal

characteristic: delivery

text: Feces from 12 month old infant

text: feces

characteristic: environment (biome)

text: feces

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: F

characteristic: feeding

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: group

characteristic: host age

text: feces

characteristic: host body product

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: Homo sapiens

text: Homo sapiens

text: Illumina

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: TUM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: Caesarean

text: Feces from 12 month old infant

characteristic: description

text: feces

text: feces

text: feces

text: F

text: Germany

text: feces

text: human-gut

text: metagenome

characteristic: investigation type

text: Homo sapiens

characteristic: organism

characteristic: project name

text: Homo sapiens

text: Illumina


text: TUM

text: public

characteristic: collection date

text: human

text: Normal

characteristic: delivery

text: Feces from 12 month old infant

text: feces

characteristic: environment (biome)

text: feces

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: B

characteristic: feeding

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: group

characteristic: host age

text: feces

characteristic: host body product

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: Homo sapiens

text: Homo sapiens

text: Illumina

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: TUM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: Normal

text: Feces from 12 month old infant

characteristic: description

text: feces

text: feces

text: feces

text: BF

text: Germany

text: feces

text: human-gut

text: metagenome

characteristic: investigation type

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Illumina

characteristic: title


text: TUM

text: public

characteristic: collection date

text: human

text: Caesarean

characteristic: delivery

text: Feces from 12 month old infant

text: feces

characteristic: environment (biome)

text: feces

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: B

characteristic: feeding

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: group

characteristic: host age

text: feces

characteristic: host body product

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: Homo sapiens

characteristic: project name

text: Homo sapiens

text: Illumina


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: TUM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: Caesarean

text: Feces from 12 month old infant

characteristic: description

text: feces

text: feces

text: feces

text: BF

text: Germany

text: feces

text: human-gut

text: metagenome

characteristic: investigation type

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Illumina

characteristic: sequencing method


text: NATIONAL CENTRE FOR BIOLOGICAL SCIENCES

text: public

tag: Namespace:NATIONAL CENTRE FOR BIOLOGICAL SCIENCES

characteristic: collection date

text: cw adult

text: Insect

characteristic: environment (biome)

text: EnvO

characteristic: environment (feature)

text: EnvO

characteristic: environment (material)

text: India

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

text: insect gut metagenome

text: insects bf

text: insect gut metagenome

text: Illumina miseq

text: cw

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: age (years)

text: human

text: The knowledge of species composition and functional aspects of the human microbiome is steadily increasing; but still limited information regarding its variation on a global scale is available. Due to the microbial involvement in inflammatory bowel diseases and their increase in global frequency; shared patterns across populations may hold important clinical relevance. In this study; we analyze a set of 89 mucosal biopsies sampled from individuals of German; Lithuanian and Indian origins; using bacterial community profiling of a roughly equal number of healthy controls; Crohn Disease and Ulcerative Colitis patients from each location. From each individual sample 16S rDNA and rRNA are analyzed as proxies for standing and active microbial community structure; respectively. We find pronounced regional as well as global disease patterns in the major phyla and patterns of diversity; which differ when investigated in the standing or active community. Geography appears to dominate patterns of beta diversity; with European samples being more similar to each other; which is more pronounced in the active microbial community. However; when geographic influence is accounted for; some universal patterns of disease become apparent. In particular; two genera belonging to the Clostridium leptum subgroup; Faecalibacteria and Papillibacter; display consistent patterns with respect to disease status and may thus serve as reliable ?microbiomarkers?. These analyses reveal the importance of the interaction of geography and disease in the interpretation of disease-associated changes in microbial communities and highlight the added value of analyzing communities on both the rDNA and rRNA level.

text: organism-associated habitat

text: organism-associated habitat

text: mucus

text: sex,sampling site,inflammatory bowel disease,clinical treatment,population,human gut metagenome,health trait

characteristic: experimental factor

text: Ulcerative Colitis

characteristic: gastrointestinal tract disorder

text: India

characteristic: height (cm)

text: mucus

characteristic: host body product

text: sigmoid colon

characteristic: host body site

text: remission

characteristic: host disease status

text: male

characteristic: host sex

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: PCR

characteristic: library screening strategy

text: Probiotics,Antibiotics

characteristic: medication

text: TGATACGTCT

characteristic: multiplex identifiers

text: PMID: 22068912

characteristic: nucleic acid amplification

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

characteristic: nucleic acid extraction

text: Homo sapiens

text: initial denaturation: 98degC_0.5min;30cycles denaturation=98degC_9sec,annealing=55degC_0.5min,extension=72degC_0.5min;final extension:72degC_10min

characteristic: pcr conditions

characteristic: pcr primers

text: BMRP

characteristic: project name

text: biopsy

characteristic: sample collection device or method

text: Homo sapiens

text: pyrosequencing

text: DNA

characteristic: sequencing template

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: Regional patterns of the standing and active human gut microbiome in health and inflammatory bowel diseases

characteristic: weight (kg)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

characteristic: environment (biome)

text: organism-associated habitat

characteristic: environment (feature)

text: mucus

characteristic: environment (material)

characteristic: experimental factor

text: Crohn's Disease

characteristic: gastrointestinal tract disorder

text: India

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: height (cm)

text: mucus

characteristic: host body product

text: sigmoid colon

characteristic: host body site

text: remission

characteristic: host disease status

text: male

text: human-gut

text: metagenome

characteristic: investigation type

text: PCR

text: ASA

text: ACGCTCGACA

text: PMID: 22068912

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

text: Homo sapiens

characteristic: organism

text: BMRP

text: biopsy

text: Homo sapiens

text: pyrosequencing

characteristic: sequencing method

text: DNA

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

text: organism-associated habitat

text: mucus

text: Healthy

text: Germany

text: mucus

text: sigmoid colon

text: healthy

text: female

characteristic: host sex

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: PCR

characteristic: library screening strategy

text: Probiotics

characteristic: medication

text: TAGAGACGAG

characteristic: multiplex identifiers

text: PMID: 22068912

characteristic: nucleic acid amplification

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

characteristic: nucleic acid extraction

text: Homo sapiens

characteristic: pcr conditions

characteristic: pcr primers

text: BMRP

characteristic: project name

text: biopsy

characteristic: sample collection device or method

text: Homo sapiens

text: pyrosequencing

text: DNA

characteristic: sequencing template

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: weight (kg)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

characteristic: environment (biome)

text: organism-associated habitat

characteristic: environment (feature)

text: mucus

characteristic: environment (material)

characteristic: experimental factor

text: Crohn's Disease

characteristic: gastrointestinal tract disorder

text: India

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: not provided

characteristic: height (cm)

text: mucus

characteristic: host body product

text: sigmoid colon

characteristic: host body site

text: remission

characteristic: host disease status

text: male

text: human-gut

text: metagenome

characteristic: investigation type

text: PCR

text: ASA,Antibiotics,Cortisone,Probiotics

text: AGACGCACTC

text: PMID: 22068912

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

text: Homo sapiens

characteristic: organism

text: BMRP

text: biopsy

text: Homo sapiens

text: pyrosequencing

characteristic: sequencing method

text: DNA

text: 16S rRNA

characteristic: title

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

text: organism-associated habitat

text: mucus

text: Ulcerative Colitis

text: India

text: not provided

text: mucus

text: sigmoid colon

text: remission

text: male

characteristic: host sex

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: PCR

characteristic: library screening strategy

text: ASA,Cortisone

characteristic: medication

text: ATACGACGTA

characteristic: multiplex identifiers

text: PMID: 22068912

characteristic: nucleic acid amplification

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

characteristic: nucleic acid extraction

text: Homo sapiens

characteristic: pcr conditions

characteristic: pcr primers

text: BMRP

characteristic: project name

text: biopsy

characteristic: sample collection device or method

text: Homo sapiens

text: pyrosequencing

text: DNA

characteristic: sequencing template

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: not provided

characteristic: weight (kg)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

characteristic: environment (biome)

text: organism-associated habitat

characteristic: environment (feature)

text: mucus

characteristic: environment (material)

characteristic: experimental factor

text: Crohn's Disease

characteristic: gastrointestinal tract disorder

text: India

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: height (cm)

text: mucus

characteristic: host body product

text: sigmoid colon

characteristic: host body site

text: remission

characteristic: host disease status

text: female

text: human-gut

text: metagenome

characteristic: investigation type

text: PCR

text: ASA,Antibiotics

text: AGCACTGTAG

text: PMID: 22068912

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

text: Homo sapiens

characteristic: organism

text: BMRP

text: biopsy

text: Homo sapiens

text: pyrosequencing

characteristic: sequencing method

text: DNA

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

text: organism-associated habitat

text: mucus

text: Healthy

text: India

text: mucus

text: sigmoid colon

text: healthy

text: male

characteristic: host sex

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: PCR

characteristic: library screening strategy

text: no medication

characteristic: medication

text: AGACGCACTC

characteristic: multiplex identifiers

text: PMID: 22068912

characteristic: nucleic acid amplification

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

characteristic: nucleic acid extraction

text: Homo sapiens

characteristic: pcr conditions

characteristic: pcr primers

text: BMRP

characteristic: project name

text: biopsy

characteristic: sample collection device or method

text: Homo sapiens

text: pyrosequencing

text: DNA

characteristic: sequencing template

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: weight (kg)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

characteristic: environment (biome)

text: organism-associated habitat

characteristic: environment (feature)

text: mucus

characteristic: environment (material)

characteristic: experimental factor

text: Healthy

characteristic: gastrointestinal tract disorder

text: India

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: not provided

characteristic: height (cm)

text: mucus

characteristic: host body product

text: sigmoid colon

characteristic: host body site

text: healthy

characteristic: host disease status

text: male

text: human-gut

text: metagenome

characteristic: investigation type

text: PCR

text: no medication

text: AGCACTGTAG

text: PMID: 22068912

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

text: Homo sapiens

characteristic: organism

text: BMRP

text: biopsy

text: Homo sapiens

text: pyrosequencing

characteristic: sequencing method

text: DNA

text: 16S rRNA

characteristic: title

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

text: organism-associated habitat

text: mucus

text: Ulcerative Colitis

text: India

text: not provided

text: mucus

text: sigmoid colon

text: remission

text: male

characteristic: host sex

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: PCR

characteristic: library screening strategy

text: ASA,Antibiotics,Probiotics

characteristic: medication

text: TCACGTACTA

characteristic: multiplex identifiers

text: PMID: 22068912

characteristic: nucleic acid amplification

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

characteristic: nucleic acid extraction

text: Homo sapiens

characteristic: pcr conditions

characteristic: pcr primers

text: BMRP

characteristic: project name

text: biopsy

characteristic: sample collection device or method

text: Homo sapiens

text: pyrosequencing

text: DNA

characteristic: sequencing template

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: not provided

characteristic: weight (kg)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

characteristic: environment (biome)

text: organism-associated habitat

characteristic: environment (feature)

text: mucus

characteristic: environment (material)

characteristic: experimental factor

text: Ulcerative Colitis

characteristic: gastrointestinal tract disorder

text: India

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: not provided

characteristic: height (cm)

text: mucus

characteristic: host body product

text: sigmoid colon

characteristic: host body site

text: remission

characteristic: host disease status

text: male

text: human-gut

text: metagenome

characteristic: investigation type

text: PCR

text: ASA,Probiotics

text: CGTCTAGTAC

text: PMID: 22068912

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

text: Homo sapiens

characteristic: organism

text: BMRP

text: biopsy

text: Homo sapiens

text: pyrosequencing

characteristic: sequencing method

text: DNA

text: 16S rRNA

characteristic: title

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

text: organism-associated habitat

text: mucus

text: Healthy

text: India

text: not provided

text: mucus

text: sigmoid colon

text: healthy

text: female

characteristic: host sex

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: PCR

characteristic: library screening strategy

text: no medication

characteristic: medication

text: ATCAGACACG

characteristic: multiplex identifiers

text: PMID: 22068912

characteristic: nucleic acid amplification

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

characteristic: nucleic acid extraction

text: Homo sapiens

characteristic: pcr conditions

characteristic: pcr primers

text: BMRP

characteristic: project name

text: biopsy

characteristic: sample collection device or method

text: Homo sapiens

text: pyrosequencing

text: DNA

characteristic: sequencing template

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: not provided

characteristic: weight (kg)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

characteristic: environment (biome)

text: organism-associated habitat

characteristic: environment (feature)

text: mucus

characteristic: environment (material)

characteristic: experimental factor

text: Healthy

characteristic: gastrointestinal tract disorder

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: height (cm)

text: mucus

characteristic: host body product

text: sigmoid colon

characteristic: host body site

text: healthy

characteristic: host disease status

text: female

text: human-gut

text: metagenome

characteristic: investigation type

text: PCR

text: no medication

text: TCGTCGCTCG

text: PMID: 22068912

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

text: Homo sapiens

characteristic: organism

text: BMRP

text: biopsy

text: Homo sapiens

text: pyrosequencing

characteristic: sequencing method

text: DNA

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

text: organism-associated habitat

text: mucus

text: Ulcerative Colitis

text: India

text: not provided

text: mucus

text: sigmoid colon

text: remission

text: male

characteristic: host sex

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: PCR

characteristic: library screening strategy

text: ASA,Antibiotics,Cortisone,AZA

characteristic: medication

text: TCTACGTAGC

characteristic: multiplex identifiers

text: PMID: 22068912

characteristic: nucleic acid amplification

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

characteristic: nucleic acid extraction

text: Homo sapiens

characteristic: pcr conditions

characteristic: pcr primers

text: BMRP

characteristic: project name

text: biopsy

characteristic: sample collection device or method

text: Homo sapiens

text: pyrosequencing

text: DNA

characteristic: sequencing template

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: not provided

characteristic: weight (kg)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

characteristic: environment (biome)

text: organism-associated habitat

characteristic: environment (feature)

text: mucus

characteristic: environment (material)

characteristic: experimental factor

text: Healthy

characteristic: gastrointestinal tract disorder

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: height (cm)

text: mucus

characteristic: host body product

text: sigmoid colon

characteristic: host body site

text: healthy

characteristic: host disease status

text: female

text: human-gut

text: metagenome

characteristic: investigation type

text: PCR

text: no medication

text: TCACGTACTA

text: PMID: 22068912

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

text: Homo sapiens

characteristic: organism

text: BMRP

text: biopsy

text: Homo sapiens

text: pyrosequencing

characteristic: sequencing method

text: DNA

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: not provided

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

text: organism-associated habitat

text: mucus

text: Crohn's Disease

text: India

text: mucus

text: sigmoid colon

text: remission

text: female

characteristic: host sex

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: PCR

characteristic: library screening strategy

text: Antibiotics

characteristic: medication

text: ACGAGTGCGT

characteristic: multiplex identifiers

text: PMID: 22068912

characteristic: nucleic acid amplification

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

characteristic: nucleic acid extraction

text: Homo sapiens

characteristic: pcr conditions

characteristic: pcr primers

text: BMRP

characteristic: project name

text: biopsy

characteristic: sample collection device or method

text: Homo sapiens

text: pyrosequencing

text: DNA

characteristic: sequencing template

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: weight (kg)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

characteristic: environment (biome)

text: organism-associated habitat

characteristic: environment (feature)

text: mucus

characteristic: environment (material)

characteristic: experimental factor

text: Ulcerative Colitis

characteristic: gastrointestinal tract disorder

text: India

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: height (cm)

text: mucus

characteristic: host body product

text: sigmoid colon

characteristic: host body site

text: remission

characteristic: host disease status

text: male

text: human-gut

text: metagenome

characteristic: investigation type

text: PCR

text: ASA,Antibiotics

text: TGTACTACTC

text: PMID: 22068912

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

text: Homo sapiens

characteristic: organism

text: BMRP

text: biopsy

text: Homo sapiens

text: pyrosequencing

characteristic: sequencing method

text: DNA

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

text: organism-associated habitat

text: mucus

text: Healthy

text: India

text: not provided

text: mucus

text: sigmoid colon

text: healthy

text: male

characteristic: host sex

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: PCR

characteristic: library screening strategy

text: Antibiotics

characteristic: medication

text: ATATCGCGAG

characteristic: multiplex identifiers

text: PMID: 22068912

characteristic: nucleic acid amplification

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

characteristic: nucleic acid extraction

text: Homo sapiens

characteristic: pcr conditions

characteristic: pcr primers

text: BMRP

characteristic: project name

text: biopsy

characteristic: sample collection device or method

text: Homo sapiens

text: pyrosequencing

text: DNA

characteristic: sequencing template

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: weight (kg)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

characteristic: environment (biome)

text: organism-associated habitat

characteristic: environment (feature)

text: mucus

characteristic: environment (material)

characteristic: experimental factor

text: Healthy

characteristic: gastrointestinal tract disorder

text: India

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: height (cm)

text: mucus

characteristic: host body product

text: sigmoid colon

characteristic: host body site

text: healthy

characteristic: host disease status

text: male

text: human-gut

text: metagenome

characteristic: investigation type

text: PCR

text: Antibiotics

text: CGTGTCTCTA

text: PMID: 22068912

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

text: Homo sapiens

characteristic: organism

text: BMRP

text: biopsy

text: Homo sapiens

text: pyrosequencing

characteristic: sequencing method

text: DNA

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

text: organism-associated habitat

text: mucus

text: Ulcerative Colitis

text: India

text: not provided

text: mucus

text: sigmoid colon

text: remission

text: male

characteristic: host sex

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: PCR

characteristic: library screening strategy

text: ASA,Cortisone

characteristic: medication

text: ACGACTACAG

characteristic: multiplex identifiers

text: PMID: 22068912

characteristic: nucleic acid amplification

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

characteristic: nucleic acid extraction

text: Homo sapiens

characteristic: pcr conditions

characteristic: pcr primers

text: BMRP

characteristic: project name

text: biopsy

characteristic: sample collection device or method

text: Homo sapiens

text: pyrosequencing

text: DNA

characteristic: sequencing template

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: not provided

characteristic: weight (kg)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

characteristic: environment (biome)

text: organism-associated habitat

characteristic: environment (feature)

text: mucus

characteristic: environment (material)

characteristic: experimental factor

text: Ulcerative Colitis

characteristic: gastrointestinal tract disorder

text: India

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: not provided

characteristic: height (cm)

text: mucus

characteristic: host body product

text: sigmoid colon

characteristic: host body site

text: remission

characteristic: host disease status

text: male

text: human-gut

text: metagenome

characteristic: investigation type

text: PCR

text: ASA,Antibiotics,Probiotics

text: CGTAGACTAG

text: PMID: 22068912

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

text: Homo sapiens

characteristic: organism

text: BMRP

text: biopsy

text: Homo sapiens

text: pyrosequencing

characteristic: sequencing method

text: DNA

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

text: organism-associated habitat

text: mucus

text: Crohn's Disease

text: India

text: not provided

text: mucus

text: sigmoid colon

text: remission

text: male

characteristic: host sex

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: PCR

characteristic: library screening strategy

text: ASA,Cortisone,Probiotics

characteristic: medication

text: ATCAGACACG

characteristic: multiplex identifiers

text: PMID: 22068912

characteristic: nucleic acid amplification

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

characteristic: nucleic acid extraction

text: Homo sapiens

characteristic: pcr conditions

characteristic: pcr primers

text: BMRP

characteristic: project name

text: biopsy

characteristic: sample collection device or method

text: Homo sapiens

text: pyrosequencing

text: DNA

characteristic: sequencing template

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: not provided

characteristic: weight (kg)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

characteristic: environment (biome)

text: organism-associated habitat

characteristic: environment (feature)

text: mucus

characteristic: environment (material)

characteristic: experimental factor

text: Crohn's Disease

characteristic: gastrointestinal tract disorder

text: India

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: height (cm)

text: mucus

characteristic: host body product

text: sigmoid colon

characteristic: host body site

text: remission

characteristic: host disease status

text: female

text: human-gut

text: metagenome

characteristic: investigation type

text: PCR

text: ASA,Cortisone

text: ATATCGCGAG

text: PMID: 22068912

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

text: Homo sapiens

characteristic: organism

text: BMRP

text: biopsy

text: Homo sapiens

text: pyrosequencing

characteristic: sequencing method

text: DNA

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

text: organism-associated habitat

text: mucus

text: Crohn's Disease

text: India

text: mucus

text: sigmoid colon

text: remission

text: female

characteristic: host sex

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: PCR

characteristic: library screening strategy

text: ASA,Cortisone,AZA,Infliximab

characteristic: medication

text: CGTGTCTCTA

characteristic: multiplex identifiers

text: PMID: 22068912

characteristic: nucleic acid amplification

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

characteristic: nucleic acid extraction

text: Homo sapiens

characteristic: pcr conditions

characteristic: pcr primers

text: BMRP

characteristic: project name

text: biopsy

characteristic: sample collection device or method

text: Homo sapiens

text: pyrosequencing

text: DNA

characteristic: sequencing template

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: weight (kg)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

characteristic: environment (biome)

text: organism-associated habitat

characteristic: environment (feature)

text: mucus

characteristic: environment (material)

characteristic: experimental factor

text: Healthy

characteristic: gastrointestinal tract disorder

text: India

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: height (cm)

text: mucus

characteristic: host body product

text: sigmoid colon

characteristic: host body site

text: healthy

characteristic: host disease status

text: female

text: human-gut

text: metagenome

characteristic: investigation type

text: PCR

text: ASA

text: CTCGCGTGTC

text: PMID: 22068912

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

text: Homo sapiens

characteristic: organism

text: BMRP

text: biopsy

text: Homo sapiens

text: pyrosequencing

characteristic: sequencing method

text: DNA

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

text: organism-associated habitat

text: mucus

text: Crohn's Disease

text: India

text: mucus

text: sigmoid colon

text: remission

text: male

characteristic: host sex

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: PCR

characteristic: library screening strategy

text: ASA,Cortisone,AZA

characteristic: medication

text: CTCGCGTGTC

characteristic: multiplex identifiers

text: PMID: 22068912

characteristic: nucleic acid amplification

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

characteristic: nucleic acid extraction

text: Homo sapiens

characteristic: pcr conditions

characteristic: pcr primers

text: BMRP

characteristic: project name

text: biopsy

characteristic: sample collection device or method

text: Homo sapiens

text: pyrosequencing

text: DNA

characteristic: sequencing template

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: weight (kg)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

characteristic: environment (biome)

text: organism-associated habitat

characteristic: environment (feature)

text: mucus

characteristic: environment (material)

characteristic: experimental factor

text: Healthy

characteristic: gastrointestinal tract disorder

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: height (cm)

text: mucus

characteristic: host body product

text: sigmoid colon

characteristic: host body site

text: healthy

characteristic: host disease status

text: female

text: human-gut

text: metagenome

characteristic: investigation type

text: PCR

text: Probiotics

text: CGTCTAGTAC

text: PMID: 22068912

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

text: Homo sapiens

characteristic: organism

text: BMRP

text: biopsy

text: Homo sapiens

text: pyrosequencing

characteristic: sequencing method

text: DNA

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

text: organism-associated habitat

text: mucus

text: Ulcerative Colitis

text: India

text: mucus

text: sigmoid colon

text: remission

text: male

characteristic: host sex

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: PCR

characteristic: library screening strategy

text: ASA,Antibiotics,Cortisone,AZA

characteristic: medication

text: CATAGTAGTG

characteristic: multiplex identifiers

text: PMID: 22068912

characteristic: nucleic acid amplification

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

characteristic: nucleic acid extraction

text: Homo sapiens

characteristic: pcr conditions

characteristic: pcr primers

text: BMRP

characteristic: project name

text: biopsy

characteristic: sample collection device or method

text: Homo sapiens

text: pyrosequencing

text: DNA

characteristic: sequencing template

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: weight (kg)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

characteristic: environment (biome)

text: organism-associated habitat

characteristic: environment (feature)

text: mucus

characteristic: environment (material)

characteristic: experimental factor

text: Crohn's Disease

characteristic: gastrointestinal tract disorder

text: India

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: height (cm)

text: mucus

characteristic: host body product

text: sigmoid colon

characteristic: host body site

text: remission

characteristic: host disease status

text: female

text: human-gut

text: metagenome

characteristic: investigation type

text: PCR

text: no medication

text: TCTCTATGCG

text: PMID: 22068912

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

text: Homo sapiens

characteristic: organism

text: BMRP

text: biopsy

text: Homo sapiens

text: pyrosequencing

characteristic: sequencing method

text: DNA

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

text: organism-associated habitat

text: mucus

text: Ulcerative Colitis

text: Germany

text: not provided

text: mucus

text: sigmoid colon

text: remission

text: female

characteristic: host sex

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: PCR

characteristic: library screening strategy

text: no medication

characteristic: medication

text: AGCACTGTAG

characteristic: multiplex identifiers

text: PMID: 22068912

characteristic: nucleic acid amplification

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

characteristic: nucleic acid extraction

text: Homo sapiens

characteristic: pcr conditions

characteristic: pcr primers

text: BMRP

characteristic: project name

text: biopsy

characteristic: sample collection device or method

text: Homo sapiens

text: pyrosequencing

text: DNA

characteristic: sequencing template

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: not provided

characteristic: weight (kg)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

characteristic: environment (biome)

text: organism-associated habitat

characteristic: environment (feature)

text: mucus

characteristic: environment (material)

characteristic: experimental factor

text: Ulcerative Colitis

characteristic: gastrointestinal tract disorder

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: not provided

characteristic: height (cm)

text: mucus

characteristic: host body product

text: sigmoid colon

characteristic: host body site

text: remission

characteristic: host disease status

text: male

text: human-gut

text: metagenome

characteristic: investigation type

text: PCR

text: Cortison,Antibiotika

text: ATCAGACACG

text: PMID: 22068912

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

text: Homo sapiens

characteristic: organism

text: BMRP

text: biopsy

text: Homo sapiens

text: pyrosequencing

characteristic: sequencing method

text: DNA

text: 16S rRNA

characteristic: title

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

text: organism-associated habitat

text: mucus

text: Ulcerative Colitis

text: Germany

text: not provided

text: mucus

text: sigmoid colon

text: remission

text: male

characteristic: host sex

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: PCR

characteristic: library screening strategy

text: no medication

characteristic: medication

text: ATATCGCGAG

characteristic: multiplex identifiers

text: PMID: 22068912

characteristic: nucleic acid amplification

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

characteristic: nucleic acid extraction

text: Homo sapiens

characteristic: pcr conditions

characteristic: pcr primers

text: BMRP

characteristic: project name

text: biopsy

characteristic: sample collection device or method

text: Homo sapiens

text: pyrosequencing

text: DNA

characteristic: sequencing template

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: not provided

characteristic: weight (kg)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

characteristic: environment (biome)

text: organism-associated habitat

characteristic: environment (feature)

text: mucus

characteristic: environment (material)

characteristic: experimental factor

text: Ulcerative Colitis

characteristic: gastrointestinal tract disorder

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: not provided

characteristic: height (cm)

text: mucus

characteristic: host body product

text: sigmoid colon

characteristic: host body site

text: remission

characteristic: host disease status

text: female

text: human-gut

text: metagenome

characteristic: investigation type

text: PCR

text: no medication

text: CGTGTCTCTA

text: PMID: 22068912

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

text: Homo sapiens

characteristic: organism

text: BMRP

text: biopsy

text: Homo sapiens

text: pyrosequencing

characteristic: sequencing method

text: DNA

text: 16S rRNA

characteristic: title

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

text: organism-associated habitat

text: mucus

text: Ulcerative Colitis

text: Germany

text: not provided

text: mucus

text: sigmoid colon

text: remission

text: male

characteristic: host sex

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: PCR

characteristic: library screening strategy

text: ASA,Cortison

characteristic: medication

text: CTCGCGTGTC

characteristic: multiplex identifiers

text: PMID: 22068912

characteristic: nucleic acid amplification

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

characteristic: nucleic acid extraction

text: Homo sapiens

characteristic: pcr conditions

characteristic: pcr primers

text: BMRP

characteristic: project name

text: biopsy

characteristic: sample collection device or method

text: Homo sapiens

text: pyrosequencing

text: DNA

characteristic: sequencing template

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: not provided

characteristic: weight (kg)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

characteristic: environment (biome)

text: organism-associated habitat

characteristic: environment (feature)

text: mucus

characteristic: environment (material)

characteristic: experimental factor

text: Ulcerative Colitis

characteristic: gastrointestinal tract disorder

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: not provided

characteristic: height (cm)

text: mucus

characteristic: host body product

text: sigmoid colon

characteristic: host body site

text: remission

characteristic: host disease status

text: male

text: human-gut

text: metagenome

characteristic: investigation type

text: PCR

text: no medication

text: TCTCTATGCG

text: PMID: 22068912

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

text: Homo sapiens

characteristic: organism

text: BMRP

text: biopsy

text: Homo sapiens

text: pyrosequencing

characteristic: sequencing method

text: DNA

text: 16S rRNA

characteristic: title

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

text: organism-associated habitat

text: mucus

text: Ulcerative Colitis

text: Germany

text: not provided

text: mucus

text: sigmoid colon

text: remission

text: female

characteristic: host sex

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: PCR

characteristic: library screening strategy

text: AZA,Cortison,Antibiotika

characteristic: medication

text: TGATACGTCT

characteristic: multiplex identifiers

text: PMID: 22068912

characteristic: nucleic acid amplification

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

characteristic: nucleic acid extraction

text: Homo sapiens

characteristic: pcr conditions

characteristic: pcr primers

text: BMRP

characteristic: project name

text: biopsy

characteristic: sample collection device or method

text: Homo sapiens

text: pyrosequencing

text: DNA

characteristic: sequencing template

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: not provided

characteristic: weight (kg)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

characteristic: environment (biome)

text: organism-associated habitat

characteristic: environment (feature)

text: mucus

characteristic: environment (material)

characteristic: experimental factor

text: Crohn's Disease

characteristic: gastrointestinal tract disorder

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: not provided

characteristic: height (cm)

text: mucus

characteristic: host body product

text: sigmoid colon

characteristic: host body site

text: remission

characteristic: host disease status

text: male

text: human-gut

text: metagenome

characteristic: investigation type

text: PCR

text: Cortison,MTX,AZA

text: TCTACGTAGC

text: PMID: 22068912

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

text: Homo sapiens

characteristic: organism

text: BMRP

text: biopsy

text: Homo sapiens

text: pyrosequencing

characteristic: sequencing method

text: DNA

text: 16S rRNA

characteristic: title

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

text: organism-associated habitat

text: mucus

text: Crohn's Disease

text: Germany

text: not provided

text: mucus

text: sigmoid colon

text: remission

text: female

characteristic: host sex

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: PCR

characteristic: library screening strategy

text: no medication

characteristic: medication

text: TGTACTACTC

characteristic: multiplex identifiers

text: PMID: 22068912

characteristic: nucleic acid amplification

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

characteristic: nucleic acid extraction

text: Homo sapiens

characteristic: pcr conditions

characteristic: pcr primers

text: BMRP

characteristic: project name

text: biopsy

characteristic: sample collection device or method

text: Homo sapiens

text: pyrosequencing

text: DNA

characteristic: sequencing template

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: not provided

characteristic: weight (kg)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

characteristic: environment (biome)

text: organism-associated habitat

characteristic: environment (feature)

text: mucus

characteristic: environment (material)

characteristic: experimental factor

text: Crohn's Disease

characteristic: gastrointestinal tract disorder

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: not provided

characteristic: height (cm)

text: mucus

characteristic: host body product

text: sigmoid colon

characteristic: host body site

text: remission

characteristic: host disease status

text: female

text: human-gut

text: metagenome

characteristic: investigation type

text: PCR

text: Infliximab,AZA

text: ACGACTACAG

text: PMID: 22068912

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

text: Homo sapiens

characteristic: organism

text: BMRP

text: biopsy

text: Homo sapiens

text: pyrosequencing

characteristic: sequencing method

text: DNA

text: 16S rRNA

characteristic: title

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

text: organism-associated habitat

text: mucus

text: Crohn's Disease

text: Germany

text: not provided

text: mucus

text: sigmoid colon

text: remission

text: male

characteristic: host sex

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: PCR

characteristic: library screening strategy

text: no medication

characteristic: medication

text: CGTAGACTAG

characteristic: multiplex identifiers

text: PMID: 22068912

characteristic: nucleic acid amplification

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

characteristic: nucleic acid extraction

text: Homo sapiens

characteristic: pcr conditions

characteristic: pcr primers

text: BMRP

characteristic: project name

text: biopsy

characteristic: sample collection device or method

text: Homo sapiens

text: pyrosequencing

text: DNA

characteristic: sequencing template

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: not provided

characteristic: weight (kg)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIEVB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (years)

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: organism-associated habitat

characteristic: environment (biome)

text: organism-associated habitat

characteristic: environment (feature)

text: mucus

characteristic: environment (material)

characteristic: experimental factor

text: Crohn's Disease

characteristic: gastrointestinal tract disorder

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: not provided

characteristic: height (cm)

text: mucus

characteristic: host body product

text: sigmoid colon

characteristic: host body site

text: remission

characteristic: host disease status

text: male

text: human-gut

text: metagenome

characteristic: investigation type

text: PCR

text: AZA

text: TACGAGTATG

text: PMID: 22068912

text: Qiagen Allprep DNA/RNA (PMID: 20522625)

text: Homo sapiens

characteristic: organism

text: BMRP

text: biopsy

text: Homo sapiens

text: pyrosequencing

characteristic: sequencing method

text: DNA

text: 16S rRNA

characteristic: title

text: not provided