text: UPSC

text: public

text: Korean spruce

text: Voucher ZR09040 Lanzhou University Botanical Garden

text: Picea koraiensis

text: Picea koraiensis

text: Picea koraiensis collected from a natural population in Jilin China near 42N 127E


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UPSC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Korean spruce

characteristic: common name

text: Voucher 19921086 Royal Botanic Garden Edinburgh; cultivated from germplasm collected in Inner Mongolia China

characteristic: description

text: Picea koraiensis

characteristic: organism

text: Picea koraiensis

text: Picea koraiensis cultivated at Royal Botanic Garden Endinburgh UK

characteristic: title

type: has member


Daphnia Iridovirus 1

text: University of Bael

text: public

text: Daphnia Iridovirus 1

tag: Namespace:University of Bael

text: Daphnia iridovirus 1

text: Daphnia iridovirus 1

text: Daphnia Iridovirus 1


text: UPSC

text: public

text: Mexican spruce

text: Voucher 1991052 Bedgebury National Pinetum; cultivated from germplasm collected from Cerro Mohinora Chihuahua Mexico

text: Picea mexicana

text: Picea mexicana

text: Picea mexicana cultivated at Bedgebury National Pinetum UK


text: UPSC

text: public

text: Mexican spruce

text: Voucher 19880558 The Arboretum at Horsholm; cultivated from germplasm collected from Cerro Mohinora Chihuahua Mexico

text: Picea mexicana

text: Picea mexicana

text: Picea mexicana cultivated at The Arboretum at Horsholm University of Copenhagen Denmark


text: UPSC

text: public

text: Colorado spruce

text: Voucher 19780256 The Arboretum at Horsholm; cultivated from germplasm collected at White Mountains Arizona USA

text: Picea pungens

text: Picea pungens

text: Picea pungens cultivated at The Arboretum at Horsholm University of Copenhagen Denmark; Voucher 19780256


text: UPSC

text: public

text: Colorado spruce

text: Voucher 19780259 The Arboretum at Horsholm; cultivated from germplasm collected in Buford Colorado USA

text: Picea pungens

text: Picea pungens

text: Picea pungens cultivated at The Arboretum at Horsholm University of Copenhagen Denmark; Voucher 19780259


text: UPSC

text: public

text: Black spruce

text: Voucher 19680218 The Arboretum at Horsholm; cultivated from germplasm collected from Mount Washington New Hampshire USA

text: Picea mariana

text: Picea mariana

text: Picea mariana cultivated at The Arboretum at Horsholm University of Copenhagen Denmark; Voucher 19680218


text: UPSC

text: public

text: Black spruce

text: Voucher 19930565 The Arboretum at Horsholm; cultivated from germplasm collected from Badger Newfoundland Canada

text: Picea mariana

text: Picea mariana

text: Picea mariana cultivated at The Arboretum at Horsholm University of Copenhagen Denmark; Voucher 19930565


text: UPSC

text: public

text: Meyers spruce

text: Voucher O60923 Lanzhou University Botanical Garden

text: Picea meyeri

text: Picea meyeri

text: Picea meyeri collected from a natural population Inner Mongolia China near 43N 117E


text: UPSC

text: public

text: Meyers spruce

text: Voucher 19860107 The Arboretum at Horsholm; cultivated from germplasm collected in Shuo Xian Shanxi China

text: Picea meyeri

text: Picea meyeri

text: Picea meyeri cultivated at The Arboretum at Horsholm University of Copenhagen Denmark


text: UPSC

text: public

text: Picea neoveitchii

text: Voucher lzt-111 Lanzhou University Botanical Garden

text: Picea neoveitchii

text: Picea neoveitchii

text: Picea neoveitchii collected from a natural population Gansu China 33N 104E


text: UPSC

text: public

text: Picea neoveitchii

text: Voucher TaiBai Lanzhou University Botanical Garden

text: Picea neoveitchii

text: Picea neoveitchii

text: Picea neoveitchii collected from a natural population Shaanxi China near 33N 104E


text: UPSC

text: public

text: Caucasian spruce

text: Voucher 19830568 The Arboretum at Horsholm; cultivated from germplasm collected at Ordu Tekmazar Turkey

text: Picea orientalis

text: Picea orientalis

text: Picea orientalis cultivated at The Arboretum at Horsholm University of Copenhagen Denmark;Voucher 19830568


text: UPSC

text: public

text: Caucasian spruce

text: Voucher 19870081 The Arboretum at Horsholm; cultivated from germplasm collected in Borjomi Georgia

text: Picea orientalis

text: Picea orientalis

text: Picea orientalis cultivated at The Arboretum at Horsholm University of Copenhagen Denmark;Voucher 19870081


text: UPSC

text: public

text: Green dragon spruce

text: Voucher 2004 Lanzhou University Botanical Garden

text: Picea retroflexa

text: Picea retroflexa

text: Picea retroflexa collected from a natural population Sichuan China near 31N 101E; Voucher 2004


text: UPSC

text: public

text: Green dragon spruce

text: Voucher 1872 Lanzhou University Botanical Garden

text: Picea retroflexa

text: Picea retroflexa

text: Picea retroflexa collected from a natural population Sichuan China near 33N 104E; Voucher 1872


text: UPSC

text: public

text: Red spruce

text: Cultivated from material collected at Mount Pisgah North Carolina USA

text: Picea rubens

text: Picea rubens

text: Picea rubens cultivated at Charles Keith Arboretum USA


text: UPSC

text: public

text: Red spruce

text: Voucher 6169 Rogow Arboretum; cultivated from germplasm from Lac-Edouard Quebec Canada

text: Picea rubens

text: Picea rubens

text: Picea rubens cultivated at Rogow Arboretum Poland


text: UPSC

text: public

text: West Himalayan spruce

text: Voucher 19840137 The Arboretum at Horsholm; cultivated from germplasm collected at Naltar Valley Pakistan

text: Picea smithiana

text: Picea smithiana

text: Picea smithiana cultivated at The Arboretum at Horsholm University of Copenhagen Denmark; Voucher 19840137


text: UPSC

text: public

text: Shrenks spruce

text: Voucher 15702 Rogow Arboretum; cultivated from germplasm from Dzungarski Altau Kazakhstan

text: Picea schrenkiana

text: Picea schrenkiana

text: Picea schrenkiana cultivated at Rogow Arboretum Poland


text: UPSC

text: public

text: West Himalayan spruce

text: Voucher 19860408 The Arboretum at Horsholm; cultivated from germplasm collected at Paktia Afghanistan

text: Picea smithiana

text: Picea smithiana

text: Picea smithiana cultivated at The Arboretum at Horsholm University of Copenhagen Denmark; Voucher 19860408


text: UPSC

text: public

text: Shrenks spruce

text: Voucher 1990060 The Arboretum at Horsholm; cultivated from germplasm collected in Tian Shan Krygyzstan

text: Picea schrenkiana

text: Picea schrenkiana

text: Picea schrenkiana cultivated at The Arboretum at Horsholm University of Copenhagen Denmark; Voucher 1990060


text: UPSC

text: public

text: Shrenks spruce

text: Voucher 19860197 The Arboretum at Horsholm; cultivated from germplasm collected from Xinjiang China near 44N 89E

text: Picea schrenkiana

text: Picea schrenkiana

text: Picea schrenkiana cultivated at The Arboretum at Horsholm University of Copenhagen Denmark; Voucher 19860197


text: UPSC

text: public

text: Alcock spruce

text: Voucher 19770679 The Arboretum at Horsholm; cultivated from germplasm collected at Nishidake Nagano Japan

text: Picea alcoquiana

text: Picea alcoquiana

text: Picea alcoquiana cultivated at The Arboretum at Horsholm University of Copenhagen Denmark


text: UPSC

text: public

text: Sargent spruce

text: Voucher 19800139 The Arboretum at Horsholm; cultivated from germplasm collected in Hanyuan Sichuan China

text: Picea brachytyla

text: Picea brachytyla

text: Picea brachytyla cultivated at The Arboretum at Horsholm University of Copenhagen Denmark


text: UPSC

text: public

text: Brewers spruce

text: Voucher 19760302 The Arboretum at Horsholm; cultivated from germplasm collected in Siskiyou Mountains California USA

text: Picea breweriana

text: Picea breweriana

text: Picea breweriana cultivated at The Arboretum at Horsholm University of Copenhagen Denmark


text: UPSC

text: public

text: Chihuahua spruce

text: Voucher 19880553 The Arboretum at Horsholm; cultivated from germplasm collected in Creel Chihuahua Mexico

text: Picea chihuahuana

text: Picea chihuahuana

text: Picea chihuahuana cultivated at The Arboretum at Horsholm University of Copenhagen Denmark


Xanthomonas retroflexus Sp953 XW-A

text: Universitetsparken 15

text: public

text: Xanthomonas retroflexus Sp953 XW-A

tag: Namespace:Universitetsparken 15

text: DNA was extracted from overnight cultures of Xanthomonas retroflexus Sp953 XW-A using the Qiagen DNeasy Blood & Tissue kit (Qiagen, cat. no. 69504). The whole-genome sequencing library was prepared using the Nextera XT DNA library preparation kit (Illumina,USA) and subsequently quantified by fragment analyser ™ (Advanced Analytical Technologies Co.). Sequencing was done as 2 X 250-base paired-end reads using the Illumina MiSeq platform (Illumina). Standard protocols were used for all of the above kits as provided by the manufacturer.

text: Xanthomonas retroflexus

text: Xanthomonas retroflexus

text: Xanthomonas retroflexus Sp953 XW-A


Xanthomonas retroflexus Sp953 XW-B

text: Universitetsparken 15

text: public

text: Xanthomonas retroflexus Sp953 XW-B

text: DNA was extracted from overnight cultures of Xanthomonas retroflexus Sp953 XW-B using the Qiagen DNeasy Blood & Tissue kit (Qiagen, cat. no. 69504). The whole-genome sequencing library was prepared using the Nextera XT DNA library preparation kit (Illumina,USA) and subsequently quantified by fragment analyser ™ (Advanced Analytical Technologies Co.). Sequencing was done as 2 X 250-base paired-end reads using the Illumina MiSeq platform (Illumina). Standard protocols were used for all of the above kits as provided by the manufacturer.

text: Xanthomonas retroflexus

text: Xanthomonas retroflexus

text: Xanthomonas retroflexus Sp953 XW-B


Xanthomonas retroflexus Sp953 XW-C

text: Universitetsparken 15

text: public

text: Xanthomonas retroflexus Sp953 XW-C

text: DNA was extracted from overnight cultures of Xanthomonas retroflexus Sp953 XW-C using the Qiagen DNeasy Blood & Tissue kit (Qiagen, cat. no. 69504). The whole-genome sequencing library was prepared using the Nextera XT DNA library preparation kit (Illumina,USA) and subsequently quantified by fragment analyser ™ (Advanced Analytical Technologies Co.). Sequencing was done as 2 X 250-base paired-end reads using the Illumina MiSeq platform (Illumina). Standard protocols were used for all of the above kits as provided by the manufacturer.

text: Xanthomonas retroflexus

text: Xanthomonas retroflexus

text: Xanthomonas retroflexus Sp953 XW-C


Xanthomonas retroflexus Sp953 XW-D

text: Universitetsparken 15

text: public

text: Xanthomonas retroflexus Sp953 XW-D

text: DNA was extracted from overnight cultures of Xanthomonas retroflexus Sp953 XW-D using the Qiagen DNeasy Blood & Tissue kit (Qiagen, cat. no. 69504). The whole-genome sequencing library was prepared using the Nextera XT DNA library preparation kit (Illumina,USA) and subsequently quantified by fragment analyser ™ (Advanced Analytical Technologies Co.). Sequencing was done as 2 X 250-base paired-end reads using the Illumina MiSeq platform (Illumina). Standard protocols were used for all of the above kits as provided by the manufacturer.

text: Xanthomonas retroflexus

text: Xanthomonas retroflexus

text: Xanthomonas retroflexus Sp953 XW-D


Xanthomonas retroflexus Sp953 XW-E

text: Universitetsparken 15

text: public

text: Xanthomonas retroflexus Sp953 XW-E

text: DNA was extracted from overnight cultures of Xanthomonas retroflexus Sp953 XW-E using the Qiagen DNeasy Blood & Tissue kit (Qiagen, cat. no. 69504). The whole-genome sequencing library was prepared using the Nextera XT DNA library preparation kit (Illumina,USA) and subsequently quantified by fragment analyser ™ (Advanced Analytical Technologies Co.). Sequencing was done as 2 X 250-base paired-end reads using the Illumina MiSeq platform (Illumina). Standard protocols were used for all of the above kits as provided by the manufacturer.

text: Xanthomonas retroflexus

text: Xanthomonas retroflexus

text: Xanthomonas retroflexus Sp953 XW-E


Xanthomonas retroflexus Sp953 XW-F

text: Universitetsparken 15

text: public

text: Xanthomonas retroflexus Sp953 XW-F

text: DNA was extracted from overnight cultures of Xanthomonas retroflexus Sp953 XW-F using the Qiagen DNeasy Blood & Tissue kit (Qiagen, cat. no. 69504). The whole-genome sequencing library was prepared using the Nextera XT DNA library preparation kit (Illumina,USA) and subsequently quantified by fragment analyser ™ (Advanced Analytical Technologies Co.). Sequencing was done as 2 X 250-base paired-end reads using the Illumina MiSeq platform (Illumina). Standard protocols were used for all of the above kits as provided by the manufacturer.

text: Xanthomonas retroflexus

text: Xanthomonas retroflexus

text: Xanthomonas retroflexus Sp953 XW-F


Paenibacillus amylolyticus Sp949 PF-A

text: Universitetsparken 15

text: public

text: Paenibacillus amylolyticus Sp949 PF-A

text: DNA was extracted from overnight cultures of Paenibacillus amylolyticus Sp949 PF-A using the Qiagen DNeasy Blood & Tissue kit (Qiagen, cat. no. 69504). The whole-genome sequencing library was prepared using the Nextera XT DNA library preparation kit (Illumina,USA) and subsequently quantified by fragment analyser ™ (Advanced Analytical Technologies Co.). Sequencing was done as 2 X 250-base paired-end reads using the Illumina MiSeq platform (Illumina). Standard protocols were used for all of the above kits as provided by the manufacturer.

text: Paenibacillus amylolyticus

text: Paenibacillus amylolyticus

text: Paenibacillus amylolyticus Sp949 PF-A


Paenibacillus amylolyticus Sp949 PF-B

text: Universitetsparken 15

text: public

text: Paenibacillus amylolyticus Sp949 PF-B

text: DNA was extracted from overnight cultures of Paenibacillus amylolyticus Sp949 PF-B using the Qiagen DNeasy Blood & Tissue kit (Qiagen, cat. no. 69504). The whole-genome sequencing library was prepared using the Nextera XT DNA library preparation kit (Illumina,USA) and subsequently quantified by fragment analyser ™ (Advanced Analytical Technologies Co.). Sequencing was done as 2 X 250-base paired-end reads using the Illumina MiSeq platform (Illumina). Standard protocols were used for all of the above kits as provided by the manufacturer.

text: Paenibacillus amylolyticus

text: Paenibacillus amylolyticus

text: Paenibacillus amylolyticus Sp949 PF-B


Paenibacillus amylolyticus Sp949 PF-C

text: Universitetsparken 15

text: public

text: Paenibacillus amylolyticus Sp949 PF-C

text: DNA was extracted from overnight cultures of Paenibacillus amylolyticus Sp949 PF-C using the Qiagen DNeasy Blood & Tissue kit (Qiagen, cat. no. 69504). The whole-genome sequencing library was prepared using the Nextera XT DNA library preparation kit (Illumina,USA) and subsequently quantified by fragment analyser ™ (Advanced Analytical Technologies Co.). Sequencing was done as 2 X 250-base paired-end reads using the Illumina MiSeq platform (Illumina). Standard protocols were used for all of the above kits as provided by the manufacturer.

text: Paenibacillus amylolyticus

text: Paenibacillus amylolyticus

text: Paenibacillus amylolyticus Sp949 PF-C


text: UNIVERSITY CENTER IN SVALBARD

text: public

unit: DD

characteristic: Latitude End

characteristic: Longitude End

tag: Namespace:UNIVERSITY CENTER IN SVALBARD

unit: m

characteristic: depth

text: metatranscriptome and 18S rDNA pyrotags

text: marine

characteristic: environment (biome)

text: Arctic

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: water

characteristic: environmental package

characteristic: event date/time

characteristic: latitude start

characteristic: longitude start

text: Arctic Ocean

characteristic: marine region

text: marine metagenome

text: Billefjorden spring 2011

characteristic: project name

text: filtration and preservation

characteristic: protocol label

unit: practical salinity unit

characteristic: salinity

text: Billefjorden spring 2011

characteristic: sampling campaign

text: research vessel Viking explorer

characteristic: sampling platform

text: BAB station

characteristic: sampling site

text: marine metagenome

unit: ºC

characteristic: temperature

text: BAB metatranscriptome


Oxford Nanopore MinION 2D pass reads

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Earlham Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Oxford Nanopore MinION 2D pass reads

tag: Namespace:Earlham Institute

characteristic: Submitter Id

text: 2D pass read data of 4 Oxford Nanopore MinION flow cells.

characteristic: description

text: Solanum americanum

characteristic: organism

text: Solanum americanum

text: Oxford Nanopore MinION RenSeq data of Solanum americanum clone 954750186

characteristic: title


Bg

text: CLM

text: public

text: Bg

text: microbiota in water of Buguk mine

text: microbial mat metagenome

text: microbial mat metagenome


Cs

text: CLM

text: public

text: Cs

text: microbiota in water of Chungsan mine

text: microbial mat metagenome

text: microbial mat metagenome


Db

text: CLM

text: public

text: Db

text: microbiota in water of Danbong mine

text: microbial mat metagenome

text: microbial mat metagenome


Gj

text: CLM

text: public

text: Gj

text: microbiota in water of Gapjeong mine

text: microbial mat metagenome

text: microbial mat metagenome


Ik

text: CLM

text: public

text: Ik

text: microbiota in water of Ilkwang mine

text: microbial mat metagenome

text: microbial mat metagenome


Sb

text: CLM

text: public

text: Sb

text: microbiota in water of Samcheck mine

text: microbial mat metagenome

text: microbial mat metagenome


text: Streptococcus equi strain 4047

characteristic: ArrayExpress-Species

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: Streptococcus equi strain 4047

characteristic: common name

text: Streptococcus equi

characteristic: sample description

text: Streptococcus equi

characteristic: strain


text: Streptococcus equi strain 4048

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: Streptococcus equi strain 4048

text: Streptococcus equi

text: Streptococcus equi


text: Streptococcus equi strain 4049

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: Streptococcus equi strain 4049

text: Streptococcus equi

text: Streptococcus equi


text: Streptococcus equi strain 4050

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Streptococcus equi strain 4050

text: Streptococcus equi

text: Streptococcus equi


text: Streptococcus equi strain 4051

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Streptococcus equi strain 4051

text: Streptococcus equi

text: Streptococcus equi


text: Streptococcus equi strain 4052

text: SC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Streptococcus equi strain 4052

text: Streptococcus equi

text: Streptococcus equi


text: Streptococcus equi strain 4053

text: SC

text: public

text: Streptococcus equi strain 4053

text: Streptococcus equi

characteristic: organism

text: Streptococcus equi


text: Streptococcus equi strain 4054

text: SC

text: public

text: Streptococcus equi strain 4054

text: Streptococcus equi

text: Streptococcus equi

characteristic: title


text: Streptococcus equi strain 4055

characteristic: ArrayExpress-Species

text: SC

text: public

text: Streptococcus equi strain 4055

text: Streptococcus equi

text: Streptococcus equi


text: Streptococcus equi strain 4056

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: Streptococcus equi strain 4056

text: Streptococcus equi

text: Streptococcus equi


text: Streptococcus equi strain 4057

text: SC

text: public

text: Streptococcus equi strain 4057

characteristic: common name

text: Streptococcus equi

text: Streptococcus equi


text: Streptococcus equi strain 4058

text: SC

text: public

text: Streptococcus equi strain 4058

text: Streptococcus equi

characteristic: sample description

text: Streptococcus equi


text: Streptococcus equi strain 4059

text: SC

text: public

text: Streptococcus equi strain 4059

text: Streptococcus equi

text: Streptococcus equi

characteristic: strain


text: Streptococcus equi strain 4060

characteristic: ENA-CHECKLIST

text: SC

text: public

text: Streptococcus equi strain 4060

text: Streptococcus equi

text: Streptococcus equi


text: Streptococcus equi strain 4061

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: Streptococcus equi strain 4061

text: Streptococcus equi

text: Streptococcus equi


text: Streptococcus equi strain 4062

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: Streptococcus equi strain 4062

text: Streptococcus equi

text: Streptococcus equi


text: Streptococcus equi strain 4063

characteristic: External Id

text: SC

text: public

text: Streptococcus equi strain 4063

text: Streptococcus equi

text: Streptococcus equi


text: Streptococcus equi strain 4064

text: SC

characteristic: INSDC center name

text: public

text: Streptococcus equi strain 4064

text: Streptococcus equi

text: Streptococcus equi


text: Streptococcus equi strain 4065

text: SC

characteristic: INSDC first public

text: public

text: Streptococcus equi strain 4065

text: Streptococcus equi

text: Streptococcus equi


text: Streptococcus equi strain 4066

text: SC

characteristic: INSDC last update

text: public

text: Streptococcus equi strain 4066

text: Streptococcus equi

text: Streptococcus equi


text: Streptococcus equi strain 4067

text: SC

text: public

characteristic: INSDC status

text: Streptococcus equi strain 4067

text: Streptococcus equi

text: Streptococcus equi


text: Streptococcus equi strain 4068

text: SC

text: public

characteristic: SRA accession

text: Streptococcus equi strain 4068

text: Streptococcus equi

text: Streptococcus equi


text: Streptococcus equi strain 4069

text: SC

text: public

characteristic: Submitter Id

text: Streptococcus equi strain 4069

text: Streptococcus equi

text: Streptococcus equi


text: Streptococcus equi strain 4070

text: SC

text: public

text: Streptococcus equi strain 4070

text: Streptococcus equi

characteristic: organism

text: Streptococcus equi


text: Streptococcus equi strain 4071

text: SC

text: public

text: Streptococcus equi strain 4071

text: Streptococcus equi

text: Streptococcus equi

characteristic: title


text: Streptococcus equi strain 4072

characteristic: ArrayExpress-Species

text: SC

text: public

text: Streptococcus equi strain 4072

text: Streptococcus equi

text: Streptococcus equi


text: Streptococcus equi strain 4073

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: Streptococcus equi strain 4073

text: Streptococcus equi

text: Streptococcus equi


text: Streptococcus equi strain 4074

text: SC

text: public

text: Streptococcus equi strain 4074

characteristic: common name

text: Streptococcus equi

text: Streptococcus equi


text: Streptococcus equi strain 4075

text: SC

text: public

text: Streptococcus equi strain 4075

text: Streptococcus equi

characteristic: sample description

text: Streptococcus equi


text: Streptococcus equi strain 4076

text: SC

text: public

text: Streptococcus equi strain 4076

text: Streptococcus equi

text: Streptococcus equi

characteristic: strain


text: Streptococcus equi strain 4077

text: INPUT _2

characteristic: ENA-CHECKLIST

text: SC

text: public

text: Streptococcus equi strain 4077

text: Streptococcus equi

text: INPUT _2

text: Streptococcus equi

text: INPUT _2

text: INPUT _2


text: Streptococcus equi strain 4078

text: INPUT _3

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: Streptococcus equi strain 4078

text: Streptococcus equi

text: INPUT _3

text: Streptococcus equi

text: INPUT _3

text: INPUT _3


text: Streptococcus equi strain 4079

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: Streptococcus equi strain 4079

text: Streptococcus equi

text: Streptococcus equi


text: Streptococcus equi strain 4080

characteristic: External Id

text: SC

text: public

text: Streptococcus equi strain 4080

text: Streptococcus equi

text: Streptococcus equi


text: Streptococcus equi strain 4081

text: INPUT _1

text: SC

characteristic: INSDC center name

text: public

text: Streptococcus equi strain 4081

text: Streptococcus equi

text: INPUT _1

text: Streptococcus equi

text: INPUT _1

text: INPUT _1


text: UPSC

characteristic: INSDC first public

text: public

text: Picea farreri

text: Clone of the type specimen

characteristic: description

text: Picea farreri

text: Picea farreri

text: Picea farreri cultivated at Westinbirt The National Arboretum UK


text: Centre of Biological Engeneering

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:Centre of Biological Engeneering

text: bioreactor sludge metagenome

text: bioreactor sludge metagenome


text: EMBL

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: human

text: Protocols: Huh-7 cells were treated with DMSO for 90 min. Cells were washed twice with PBS, UV-crosslinked at 254nm and lysed in lysis buffer (100mM NaCl, 50 mM TRIS-HCl pH7.5, 1mM MgCl2, 0.1 mM CaCl2, 1% NP40, 0.1% SDS, 0.5% Na-deoxycholate, protease inhibitors cocktail). iCLIP protocol was then followed (Koenig et al, 2010). Shortly, lysates were sonicated, cleared and treated with RNase I and DNAse I. Immunoprecipitation was performed with antibodies coupled to Protein G Dynabeads for 1 hour at 4 C. Beads were washed twice with lysis buffer, twice with high salt buffer (1M NaCl, 1mM EDTA, 1% NP40, 0.1% SDS, 0.5% Na-deoxycholate, protease inhibitors cocktail) and twice with low salt buffer (50mM NaCl, 50mM TRIS-HCl pH7.5, 10 mM MgCl2, 0.5% NP40). For linker ligation, beads were incubated at 16 C overnight, washed twice with low salt buffer, radioactively labeled with T4 polynucleotide kinase and eluted by boiling. Complexes were resolved on PAGE, RNAs isolated and used for cDNA production. Libraries were generated as described in Koenig et al, 2010 [PMID: 20601959].

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens


text: UPSC

text: public

text: Yeddo spruce

text: Voucher 14247 Rogow Arboretum; cultivated from germplasm from Jilin China 42N 127E

text: Picea jezoensis

characteristic: organism

text: Picea jezoensis

text: Picea jezoensis cultivated at Rogow Arboretum Poland

characteristic: title


text: UPSC

text: public

text: yatsugatake-to-hi

characteristic: common name

text: Voucher 24-670 Bedgebury National Pinetum; cultivated from germplasm collected from Yamaguchi Japan

text: Picea koyamae

text: Picea koyamae

text: Picea koyamae cultivated at Bedgebury National Pinetum UK


text: UPSC

text: public

text: Picea maximowiczii

text: Voucher 18064 Royal Botanic Gardens Kew cultivated from germplasm collected in Japan

text: Picea maximowiczii

text: Picea maximowiczii

text: Picea maximowiczii cultivated at Royal Botanic Gardens Kew UK


text: UPSC

text: public

text: Picea purpurea

text: Voucher LiuJQ-QTP-2011-294 Lanzhou University Botanical Garden

text: Picea purpurea

text: Picea purpurea

text: Picea purpurea collected from natural population in Gansu China near 34N 102E


text: UPSC

text: public

text: Picea spinulosa

text: Voucher F022 Lanzhou University Botanical Garden

text: Picea spinulosa

text: Picea spinulosa

text: Picea spinulosa cultivated at Lazhou University Botanical Garden


text: UPSC

text: public

text: tigertail spruce

text: Voucher 99251086 The Arboretum at Horsholm; cultivated from germplasm collected in Honshu Japan

text: Picea torano

text: Picea torano

text: Picea torano cultivated at The Arboretum at Horsholm University of Copenhagen Denmark


text: UPSC

text: public

text: Picea wilsonii

text: Voucher 19800115 The Arboretum at Horsholm; cultivated from germplasm collected in Luliang Shan Shanxi China

text: Picea wilsonii

text: Picea wilsonii

text: Picea wilsonii cultivated at The Arboretum at Horsholm University of Copenhagen Denmark


text: UPSC

text: public

text: Norway spruce

text: Voucher 19540267 The Arboretum at Horsholm; cultivated from germplasm collected at 43N 20E

text: Picea abies

text: Picea abies

text: Picea abies cultivated at The Arboretum at Horsholm University of Copenhagen Denmark; Voucher 19540267


text: UPSC

text: public

text: Norway spruce

text: Voucher 19830406 The Arboretum at Horsholm; cultivated from germplasm collected at 60N 7E

text: Picea abies

text: Picea abies

text: Picea abies cultivated at The Arboretum at Horsholm University of Copenhagen Denmark; Voucher 19830406


E-MTAB-4850:PB-T cell 1

text: public

text: E-MTAB-4850:PB-T cell 1

tag: Namespace:Systems Medicine in Infectious Diseases, Inflammation and Infection Research Centre, School of Medical Sciences, University of New South Wales, Sydney, Australia

unit: year

characteristic: age

text: ArrayExpress

text: primary cell

text: CD8-Positive T-Lymphocytes

characteristic: cell type

text: human

text: Protocols: HCV-specific CD8+ T cells were stained with NS31073-Dextramer (Immudex; Copenhagen, Denmark). Live/Dead fixable blue dye (Invitrogen) was used to exclude non-viable cells from the analysis. Subsequently, cells were washed and surface stained with the following monoclonal antibodies (mAbs): CD3-APC- Cy7, CD8-Alexa Fluor700 and CD19-PE-Cy5 (BD Biosciences). After the final − wash the cells were resuspended in 500 μl of PBS, 2mM EDTA and 0.5% BSA (Sigma-Aldrich, Germany) solution kept in dark at 4 °C until data acquisition. After exclusion of non-viable/CD19+ cells, CD3+ CD8+ dextramer+ cells were sorted directly into 96-well PCR plates (Eppendorf) using a BD Influx cell sorter (BD Influx; BD Biosciences, Franklin Lakes, NJ) and stored at 80 °C for subsequent TCRαβ analysis. Single cell RNA sequencing was performed using Smart-seq2 as described by Picelli et al. (Picelli et al. Nature methods 2013) with the following modifications. Cell lysis buffer was prepared by adding 1 μlRNase inhibitor (Clontech, Mountain View, CA) to 19 μlTriton X-100 solution (0.2% v/v). Cells were sorted directly into tube containing 2 μl lysis buffer, 1 μl dNTP mix (10mM) and 1 μl oligo-dT primer at 5 μM. Tubes were stored at -80 °C until needed. Reverse-transcription and PCR amplification were performed as described with the exception of reducing the IS PCR primer to a 50 nM final concentration and increasing the number of cycles to 28. Sequencing libraries were prepared using the Nextera XT Library Preparation Kit (Illumina; San Diego, CA, USA) and sequencing was performed on Illumina MiSeq and NextSeq sequencing platforms.

text: hepatitis C infection

characteristic: disease

text: clearance

characteristic: disease staging

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

characteristic: sex

text: 1 cell

characteristic: single cell well quality

text: PB-T cell 1


E-MTAB-4850:PB-T cell 10

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Systems Medicine in Infectious Diseases, Inflammation and Infection Research Centre, School of Medical Sciences, University of New South Wales, Sydney, Australia

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-4850:PB-T cell 10

text: ArrayExpress

text: primary cell

text: CD8-Positive T-Lymphocytes

text: human

characteristic: description

text: hepatitis C infection

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: 1 cell

text: PB-T cell 10


E-MTAB-4850:PB-T cell 11

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-4850:PB-T cell 11

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: primary cell

characteristic: cell line

text: CD8-Positive T-Lymphocytes

text: human

text: hepatitis C infection

text: clearance

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: 1 cell

text: PB-T cell 11


E-MTAB-4850:PB-T cell 12

text: public

text: E-MTAB-4850:PB-T cell 12

characteristic: age

text: ArrayExpress

text: primary cell

text: CD8-Positive T-Lymphocytes

characteristic: cell type

text: human

characteristic: common name

text: hepatitis C infection

characteristic: disease

text: clearance

characteristic: disease staging

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

text: 1 cell

text: PB-T cell 12

characteristic: title


E-MTAB-4850:PB-T cell 13

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-4850:PB-T cell 13

text: ArrayExpress

text: primary cell

text: CD8-Positive T-Lymphocytes

text: human

text: hepatitis C infection

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

characteristic: sex

text: 1 cell

characteristic: single cell well quality

text: PB-T cell 13


E-MTAB-4850:PB-T cell 14

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-4850:PB-T cell 14

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: primary cell

text: CD8-Positive T-Lymphocytes

text: human

characteristic: description

text: hepatitis C infection

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: 1 cell

text: PB-T cell 14


E-MTAB-4850:PB-T cell 15

text: public

text: E-MTAB-4850:PB-T cell 15

characteristic: age

text: ArrayExpress

text: primary cell

characteristic: cell line

text: CD8-Positive T-Lymphocytes

characteristic: cell type

text: human

characteristic: common name

text: hepatitis C infection

characteristic: disease

text: clearance

characteristic: disease staging

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: 1 cell

text: PB-T cell 15


E-MTAB-4850:PB-T cell 16

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-4850:PB-T cell 16

text: ArrayExpress

text: primary cell

text: CD8-Positive T-Lymphocytes

text: human

text: hepatitis C infection

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

text: 1 cell

text: PB-T cell 16

characteristic: title


E-MTAB-4850:PB-T cell 17

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-4850:PB-T cell 17

characteristic: Submitter Id

text: ArrayExpress

text: primary cell

text: CD8-Positive T-Lymphocytes

text: human

text: hepatitis C infection

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

characteristic: sex

text: 1 cell

characteristic: single cell well quality

text: PB-T cell 17


E-MTAB-4850:PB-T cell 18

text: public

text: E-MTAB-4850:PB-T cell 18

characteristic: age

text: ArrayExpress

characteristic: broker name

text: primary cell

characteristic: cell line

text: CD8-Positive T-Lymphocytes

characteristic: cell type

text: human

characteristic: common name

characteristic: description

text: hepatitis C infection

characteristic: disease

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: 1 cell

text: PB-T cell 18


E-MTAB-4850:PB-T cell 2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-4850:PB-T cell 2

text: ArrayExpress

text: primary cell

text: CD8-Positive T-Lymphocytes

text: human

text: hepatitis C infection

text: clearance

characteristic: disease staging

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: 1 cell

text: PB-T cell 2


E-MTAB-4850:PB-T cell 3

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-4850:PB-T cell 3

characteristic: Submitter Id

text: ArrayExpress

text: primary cell

text: CD8-Positive T-Lymphocytes

text: human

text: hepatitis C infection

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

text: 1 cell

text: PB-T cell 3

characteristic: title


E-MTAB-4850:PB-T cell 4

text: public

text: E-MTAB-4850:PB-T cell 4

characteristic: age

text: ArrayExpress

characteristic: broker name

text: primary cell

characteristic: cell line

text: CD8-Positive T-Lymphocytes

characteristic: cell type

text: human

characteristic: common name

text: hepatitis C infection

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

characteristic: sex

text: 1 cell

characteristic: single cell well quality

text: PB-T cell 4


E-MTAB-4850:PB-T cell 5

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-4850:PB-T cell 5

text: ArrayExpress

text: primary cell

text: CD8-Positive T-Lymphocytes

text: human

characteristic: description

text: hepatitis C infection

characteristic: disease

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: 1 cell

text: PB-T cell 5


E-MTAB-4850:PB-T cell 6

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-4850:PB-T cell 6

characteristic: Submitter Id

text: ArrayExpress

text: primary cell

text: CD8-Positive T-Lymphocytes

text: human

text: hepatitis C infection

text: clearance

characteristic: disease staging

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: 1 cell

text: PB-T cell 6


E-MTAB-4850:PB-T cell 7

text: public

text: E-MTAB-4850:PB-T cell 7

characteristic: age

text: ArrayExpress

characteristic: broker name

text: primary cell

characteristic: cell line

text: CD8-Positive T-Lymphocytes

characteristic: cell type

text: human

characteristic: common name

text: hepatitis C infection

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

text: 1 cell

text: PB-T cell 7

characteristic: title


E-MTAB-4850:PB-T cell 8

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-4850:PB-T cell 8

text: ArrayExpress

text: primary cell

text: CD8-Positive T-Lymphocytes

text: human

text: hepatitis C infection

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

characteristic: sex

text: 1 cell

characteristic: single cell well quality

text: PB-T cell 8


E-MTAB-4850:PB-T cell 9

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-4850:PB-T cell 9

characteristic: Submitter Id

text: ArrayExpress

text: primary cell

text: CD8-Positive T-Lymphocytes

text: human

characteristic: description

text: hepatitis C infection

characteristic: disease

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: 1 cell

text: PB-T cell 9


E-MTAB-4850:PB-T cell 19

text: public

text: E-MTAB-4850:PB-T cell 19

characteristic: age

text: ArrayExpress

characteristic: broker name

text: primary cell

characteristic: cell line

text: CD8-Positive T-Lymphocytes

characteristic: cell type

text: human

characteristic: common name

text: hepatitis C infection

text: clearance

characteristic: disease staging

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: 10 cells

text: PB-T cell 19


E-MTAB-4850:PB-T cell 20

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-4850:PB-T cell 20

text: ArrayExpress

text: primary cell

text: CD8-Positive T-Lymphocytes

text: human

text: hepatitis C infection

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

text: 10 cells

text: PB-T cell 20

characteristic: title


E-MTAB-4850:CL-Stim 1

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-4850:CL-Stim 1

characteristic: Submitter Id

text: ArrayExpress

text: immortal cell line cell

text: CD8-Positive T-Lymphocytes

text: human

text: Protocols: HCV-specific CD8+ T cells were stained with NS31073-Dextramer (Immudex; Copenhagen, Denmark). Live/Dead fixable blue dye (Invitrogen) was used to exclude non-viable cells from the analysis. Subsequently, cells were washed and surface stained with the following monoclonal antibodies (mAbs): CD3-APC- Cy7, CD8-Alexa Fluor700 and CD19-PE-Cy5 (BD Biosciences). After the final − wash the cells were resuspended in 500 μl of PBS, 2mM EDTA and 0.5% BSA (Sigma-Aldrich, Germany) solution kept in dark at 4 °C until data acquisition. After exclusion of non-viable/CD19+ cells, CD3+ CD8+ dextramer+ cells were sorted directly into 96-well PCR plates (Eppendorf) using a BD Influx cell sorter (BD Influx; BD Biosciences, Franklin Lakes, NJ) and stored at 80 °C for subsequent TCRαβ analysis. PBMC were separated from freshly collected whole blood by density gradient centrifugation, before 4 × 10^5 cells per well were cultured in medium (AIM-V with 1% Glutamax, 1% Penicillin-Streptomycin) supplemented with 10% heat inactivated human AB serum (Sigma, USA) in 96-well U-bottomed plates in presence of 10 μg ml− 1 of the CINGVCWTV peptide (aa 1073-1081 of HCV non-structural 3 protein). For the initial culture, the cytokines, IL-7 (10 ng ml− 1, Miltenyi Biotec), IL-12 (300 ρg ml− 1, Miltenyi Biotec) and IL-15 (10 ng ml− 1, Miltenyi Biotec) were added. Fresh AIM-V media and IL-2 (20 U ml− 1, Miltenyi Biotec) was added to the wells on days 4 and 7 post-stimulation. On day 10 post-stimulation, cells were re-stimulated with irradiated autologous monocytes supplemented with IL-2, IL-7, IL-12 and IL-15 in same concentrations as stated for day 1. On day 14 and 17 fresh AIM-V media containing IL-2 (U ml− 1) was added to the wells. The established cell line was harvested at day 20 and cryopreserved in RPMI with 20% DMSO. Re-stimulation of the cell line was performed with 10 μg ml− 1 of the CINGVCWTV peptide per well (2 x 10^5 cells in each well) for 24 h. Single cells were isolated from cell lines by flow cytometry Single cell RNA sequencing was performed using Smart-seq2 as described by Picelli et al. (Picelli et al. Nature methods 2013) with the following modifications. Cell lysis buffer was prepared by adding 1 μlRNase inhibitor (Clontech, Mountain View, CA) to 19 μlTriton X-100 solution (0.2% v/v). Cells were sorted directly into tube containing 2 μl lysis buffer, 1 μl dNTP mix (10mM) and 1 μl oligo-dT primer at 5 μM. Tubes were stored at -80 °C until needed. Reverse-transcription and PCR amplification were performed as described with the exception of reducing the IS PCR primer to a 50 nM final concentration and increasing the number of cycles to 28. Sequencing libraries were prepared using the Nextera XT Library Preparation Kit (Illumina; San Diego, CA, USA) and sequencing was performed on Illumina MiSeq and NextSeq sequencing platforms.

text: hepatitis C infection

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

characteristic: sex

text: 1 cell

characteristic: single cell well quality

text: CL-Stim 1


E-MTAB-4850:CL-Stim 10

text: public

text: E-MTAB-4850:CL-Stim 10

characteristic: age

text: ArrayExpress

characteristic: broker name

text: immortal cell line cell

characteristic: cell line

text: CD8-Positive T-Lymphocytes

characteristic: cell type

text: human

characteristic: common name

characteristic: description

text: hepatitis C infection

characteristic: disease

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: 1 cell

text: CL-Stim 10


E-MTAB-4850:CL-Stim 11

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-4850:CL-Stim 11

text: ArrayExpress

text: immortal cell line cell

text: CD8-Positive T-Lymphocytes

text: human

text: hepatitis C infection

text: clearance

characteristic: disease staging

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: 1 cell

text: CL-Stim 11


E-MTAB-4850:CL-Stim 12

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-4850:CL-Stim 12

characteristic: Submitter Id

text: ArrayExpress

text: immortal cell line cell

text: CD8-Positive T-Lymphocytes

text: human

text: hepatitis C infection

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

text: 1 cell

text: CL-Stim 12

characteristic: title


E-MTAB-4850:CL-Stim 13

text: public

text: E-MTAB-4850:CL-Stim 13

characteristic: age

text: ArrayExpress

characteristic: broker name

text: immortal cell line cell

characteristic: cell line

text: CD8-Positive T-Lymphocytes

characteristic: cell type

text: human

characteristic: common name

text: hepatitis C infection

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

characteristic: sex

text: 1 cell

characteristic: single cell well quality

text: CL-Stim 13


E-MTAB-4850:CL-Stim 14

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-4850:CL-Stim 14

text: ArrayExpress

text: immortal cell line cell

text: CD8-Positive T-Lymphocytes

text: human

characteristic: description

text: hepatitis C infection

characteristic: disease

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: 1 cell

text: CL-Stim 14


E-MTAB-4850:CL-Stim 15

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-4850:CL-Stim 15

characteristic: Submitter Id

text: ArrayExpress

text: immortal cell line cell

text: CD8-Positive T-Lymphocytes

text: human

text: hepatitis C infection

text: clearance

characteristic: disease staging

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: 1 cell

text: CL-Stim 15


E-MTAB-4850:CL-Stim 16

text: public

text: E-MTAB-4850:CL-Stim 16

characteristic: age

text: ArrayExpress

characteristic: broker name

text: immortal cell line cell

characteristic: cell line

text: CD8-Positive T-Lymphocytes

characteristic: cell type

text: human

characteristic: common name

text: hepatitis C infection

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

text: 1 cell

text: CL-Stim 16

characteristic: title


E-MTAB-4850:CL-Stim 17

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-4850:CL-Stim 17

text: ArrayExpress

text: immortal cell line cell

text: CD8-Positive T-Lymphocytes

text: human

text: hepatitis C infection

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

characteristic: sex

text: 1 cell

characteristic: single cell well quality

text: CL-Stim 17


E-MTAB-4850:CL-Stim 18

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-4850:CL-Stim 18

characteristic: Submitter Id

text: ArrayExpress

text: immortal cell line cell

text: CD8-Positive T-Lymphocytes

text: human

characteristic: description

text: hepatitis C infection

characteristic: disease

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: 1 cell

text: CL-Stim 18


E-MTAB-4850:CL-Stim 2

text: public

text: E-MTAB-4850:CL-Stim 2

characteristic: age

text: ArrayExpress

characteristic: broker name

text: immortal cell line cell

characteristic: cell line

text: CD8-Positive T-Lymphocytes

characteristic: cell type

text: human

characteristic: common name

text: hepatitis C infection

text: clearance

characteristic: disease staging

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: 1 cell

text: CL-Stim 2


E-MTAB-4850:CL-Stim 3

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-4850:CL-Stim 3

text: ArrayExpress

text: immortal cell line cell

text: CD8-Positive T-Lymphocytes

text: human

text: hepatitis C infection

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

text: 1 cell

text: CL-Stim 3

characteristic: title


E-MTAB-4850:CL-Stim 4

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-4850:CL-Stim 4

characteristic: Submitter Id

text: ArrayExpress

text: immortal cell line cell

text: CD8-Positive T-Lymphocytes

text: human

text: hepatitis C infection

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

characteristic: sex

text: 1 cell

characteristic: single cell well quality

text: CL-Stim 4


E-MTAB-4850:CL-Stim 5

text: public

text: E-MTAB-4850:CL-Stim 5

characteristic: age

text: ArrayExpress

characteristic: broker name

text: immortal cell line cell

characteristic: cell line

text: CD8-Positive T-Lymphocytes

characteristic: cell type

text: human

characteristic: common name

characteristic: description

text: hepatitis C infection

characteristic: disease

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: 1 cell

text: CL-Stim 5


E-MTAB-4850:CL-Stim 6

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-4850:CL-Stim 6

text: ArrayExpress

text: immortal cell line cell

text: CD8-Positive T-Lymphocytes

text: human

text: hepatitis C infection

text: clearance

characteristic: disease staging

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: 1 cell

text: CL-Stim 6


E-MTAB-4850:CL-Stim 7

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-4850:CL-Stim 7

characteristic: Submitter Id

text: ArrayExpress

text: immortal cell line cell

text: CD8-Positive T-Lymphocytes

text: human

text: hepatitis C infection

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

text: 1 cell

text: CL-Stim 7

characteristic: title


E-MTAB-4850:CL-Stim 8

text: public

text: E-MTAB-4850:CL-Stim 8

characteristic: age

text: ArrayExpress

characteristic: broker name

text: immortal cell line cell

characteristic: cell line

text: CD8-Positive T-Lymphocytes

characteristic: cell type

text: human

characteristic: common name

text: hepatitis C infection

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

characteristic: sex

text: 1 cell

characteristic: single cell well quality

text: CL-Stim 8


E-MTAB-4850:CL-Stim 9

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-4850:CL-Stim 9

text: ArrayExpress

text: immortal cell line cell

text: CD8-Positive T-Lymphocytes

text: human

characteristic: description

text: hepatitis C infection

characteristic: disease

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: 1 cell

text: CL-Stim 9


E-MTAB-4850:CL-Unstim 1

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-4850:CL-Unstim 1

characteristic: Submitter Id

text: ArrayExpress

text: immortal cell line cell

text: CD8-Positive T-Lymphocytes

text: human

text: hepatitis C infection

text: clearance

characteristic: disease staging

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: 1 cell

text: CL-Unstim 1


E-MTAB-4850:CL-Unstim 10

text: public

text: E-MTAB-4850:CL-Unstim 10

characteristic: age

text: ArrayExpress

characteristic: broker name

text: immortal cell line cell

characteristic: cell line

text: CD8-Positive T-Lymphocytes

characteristic: cell type

text: human

characteristic: common name

text: hepatitis C infection

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

text: 1 cell

text: CL-Unstim 10

characteristic: title


E-MTAB-4850:CL-Unstim 11

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-4850:CL-Unstim 11

text: ArrayExpress

text: immortal cell line cell

text: CD8-Positive T-Lymphocytes

text: human

text: hepatitis C infection

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

characteristic: sex

text: 1 cell

characteristic: single cell well quality

text: CL-Unstim 11


E-MTAB-4850:CL-Unstim 12

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-4850:CL-Unstim 12

characteristic: Submitter Id

text: ArrayExpress

text: immortal cell line cell

text: CD8-Positive T-Lymphocytes

text: human

characteristic: description

text: hepatitis C infection

characteristic: disease

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: 1 cell

text: CL-Unstim 12


E-MTAB-4850:CL-Unstim 13

text: public

text: E-MTAB-4850:CL-Unstim 13

characteristic: age

text: ArrayExpress

characteristic: broker name

text: immortal cell line cell

characteristic: cell line

text: CD8-Positive T-Lymphocytes

characteristic: cell type

text: human

characteristic: common name

text: hepatitis C infection

text: clearance

characteristic: disease staging

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: 1 cell

text: CL-Unstim 13


E-MTAB-4850:CL-Unstim 14

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-4850:CL-Unstim 14

text: ArrayExpress

text: immortal cell line cell

text: CD8-Positive T-Lymphocytes

text: human

text: hepatitis C infection

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

text: 1 cell

text: CL-Unstim 14

characteristic: title


E-MTAB-4850:CL-Unstim 15

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-4850:CL-Unstim 15

characteristic: Submitter Id

text: ArrayExpress

text: immortal cell line cell

text: CD8-Positive T-Lymphocytes

text: human

text: hepatitis C infection

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

characteristic: sex

text: 1 cell

characteristic: single cell well quality

text: CL-Unstim 15


E-MTAB-4850:CL-Unstim 16

text: public

text: E-MTAB-4850:CL-Unstim 16

characteristic: age

text: ArrayExpress

characteristic: broker name

text: immortal cell line cell

characteristic: cell line

text: CD8-Positive T-Lymphocytes

characteristic: cell type

text: human

characteristic: common name

characteristic: description

text: hepatitis C infection

characteristic: disease

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: 1 cell

text: CL-Unstim 16


E-MTAB-4850:CL-Unstim 17

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-4850:CL-Unstim 17

text: ArrayExpress

text: immortal cell line cell

text: CD8-Positive T-Lymphocytes

text: human

text: hepatitis C infection

text: clearance

characteristic: disease staging

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: 1 cell

text: CL-Unstim 17


E-MTAB-4850:CL-Unstim 18

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-4850:CL-Unstim 18

characteristic: Submitter Id

text: ArrayExpress

text: immortal cell line cell

text: CD8-Positive T-Lymphocytes

text: human

text: hepatitis C infection

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

text: 1 cell

text: CL-Unstim 18

characteristic: title


E-MTAB-4850:CL-Unstim 2

text: public

text: E-MTAB-4850:CL-Unstim 2

characteristic: age

text: ArrayExpress

characteristic: broker name

text: immortal cell line cell

characteristic: cell line

text: CD8-Positive T-Lymphocytes

characteristic: cell type

text: human

characteristic: common name

text: hepatitis C infection

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

characteristic: sex

text: 1 cell

characteristic: single cell well quality

text: CL-Unstim 2


E-MTAB-4850:CL-Unstim 3

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-4850:CL-Unstim 3

text: ArrayExpress

text: immortal cell line cell

text: CD8-Positive T-Lymphocytes

text: human

characteristic: description

text: hepatitis C infection

characteristic: disease

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: 1 cell

text: CL-Unstim 3


E-MTAB-4850:CL-Unstim 4

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-4850:CL-Unstim 4

characteristic: Submitter Id

text: ArrayExpress

text: immortal cell line cell

text: CD8-Positive T-Lymphocytes

text: human

text: hepatitis C infection

text: clearance

characteristic: disease staging

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: 1 cell

text: CL-Unstim 4


E-MTAB-4850:CL-Unstim 5

text: public

text: E-MTAB-4850:CL-Unstim 5

characteristic: age

text: ArrayExpress

characteristic: broker name

text: immortal cell line cell

characteristic: cell line

text: CD8-Positive T-Lymphocytes

characteristic: cell type

text: human

characteristic: common name

text: hepatitis C infection

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

text: 1 cell

text: CL-Unstim 5

characteristic: title


E-MTAB-4850:CL-Unstim 6

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-4850:CL-Unstim 6

text: ArrayExpress

text: immortal cell line cell

text: CD8-Positive T-Lymphocytes

text: human

text: hepatitis C infection

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

characteristic: sex

text: 1 cell

characteristic: single cell well quality

text: CL-Unstim 6


E-MTAB-4850:CL-Unstim 7

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-4850:CL-Unstim 7

characteristic: Submitter Id

text: ArrayExpress

text: immortal cell line cell

text: CD8-Positive T-Lymphocytes

text: human

characteristic: description

text: hepatitis C infection

characteristic: disease

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: 1 cell

text: CL-Unstim 7


E-MTAB-4850:CL-Unstim 8

text: public

text: E-MTAB-4850:CL-Unstim 8

characteristic: age

text: ArrayExpress

characteristic: broker name

text: immortal cell line cell

characteristic: cell line

text: CD8-Positive T-Lymphocytes

characteristic: cell type

text: human

characteristic: common name

text: hepatitis C infection

text: clearance

characteristic: disease staging

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: 1 cell

text: CL-Unstim 8


E-MTAB-4850:CL-Unstim 9

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-4850:CL-Unstim 9

text: ArrayExpress

text: immortal cell line cell

text: CD8-Positive T-Lymphocytes

text: human

text: hepatitis C infection

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

text: 1 cell

text: CL-Unstim 9

characteristic: title


E-MTAB-4850:CL-Stim 19

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-4850:CL-Stim 19

characteristic: Submitter Id

text: ArrayExpress

text: immortal cell line cell

text: CD8-Positive T-Lymphocytes

text: human

text: hepatitis C infection

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

characteristic: sex

text: 10 cells

characteristic: single cell well quality

text: CL-Stim 19


E-MTAB-4850:CL-Stim 20

text: public

text: E-MTAB-4850:CL-Stim 20

characteristic: age

text: ArrayExpress

characteristic: broker name

text: immortal cell line cell

characteristic: cell line

text: CD8-Positive T-Lymphocytes

characteristic: cell type

text: human

characteristic: common name

characteristic: description

text: hepatitis C infection

characteristic: disease

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: 10 cells

text: CL-Stim 20


E-MTAB-4850:CL-Unstim 19

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-4850:CL-Unstim 19

text: ArrayExpress

text: immortal cell line cell

text: CD8-Positive T-Lymphocytes

text: human

text: hepatitis C infection

text: clearance

characteristic: disease staging

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: 10 cells

text: CL-Unstim 19


E-MTAB-4850:CL-Unstim 20

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-4850:CL-Unstim 20

characteristic: Submitter Id

text: ArrayExpress

text: immortal cell line cell

text: CD8-Positive T-Lymphocytes

text: human

text: hepatitis C infection

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

text: 10 cells

text: CL-Unstim 20

characteristic: title


E-MTAB-4850:PB-T cell 21

text: public

text: E-MTAB-4850:PB-T cell 21

characteristic: age

text: ArrayExpress

characteristic: broker name

text: primary cell

characteristic: cell line

text: CD8-Positive T-Lymphocytes

characteristic: cell type

text: human

characteristic: common name

text: hepatitis C infection

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

characteristic: sex

text: 1 cell

characteristic: single cell well quality

text: PB-T cell 21


E-MTAB-4850:PB-T cell 22

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-4850:PB-T cell 22

text: ArrayExpress

text: primary cell

text: CD8-Positive T-Lymphocytes

text: human

characteristic: description

text: hepatitis C infection

characteristic: disease

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: 1 cell

text: PB-T cell 22


E-MTAB-4850:PB-T cell 23

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-4850:PB-T cell 23

characteristic: Submitter Id

text: ArrayExpress

text: primary cell

text: CD8-Positive T-Lymphocytes

text: human

text: hepatitis C infection

text: clearance

characteristic: disease staging

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: 1 cell

text: PB-T cell 23


E-MTAB-4850:PB-T cell 24

text: public

text: E-MTAB-4850:PB-T cell 24

characteristic: age

text: ArrayExpress

characteristic: broker name

text: primary cell

characteristic: cell line

text: CD8-Positive T-Lymphocytes

characteristic: cell type

text: human

characteristic: common name

text: hepatitis C infection

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

text: 10 cells

text: PB-T cell 24

characteristic: title


E-MTAB-4850:CL-Stim 21

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-4850:CL-Stim 21

text: ArrayExpress

text: immortal cell line cell

text: CD8-Positive T-Lymphocytes

text: human

text: hepatitis C infection

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

characteristic: sex

text: 1 cell

characteristic: single cell well quality

text: CL-Stim 21


E-MTAB-4850:CL-Stim 22

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-4850:CL-Stim 22

characteristic: Submitter Id

text: ArrayExpress

text: immortal cell line cell

text: CD8-Positive T-Lymphocytes

text: human

characteristic: description

text: hepatitis C infection

characteristic: disease

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: 1 cell

text: CL-Stim 22


E-MTAB-4850:CL-Stim 23

text: public

text: E-MTAB-4850:CL-Stim 23

characteristic: age

text: ArrayExpress

characteristic: broker name

text: immortal cell line cell

characteristic: cell line

text: CD8-Positive T-Lymphocytes

characteristic: cell type

text: human

characteristic: common name

text: hepatitis C infection

text: clearance

characteristic: disease staging

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: 1 cell

text: CL-Stim 23


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: ArrayExpress

text: immortal cell line cell

text: CD8-Positive T-Lymphocytes

text: human

text: hepatitis C infection

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

text: 1 cell

characteristic: title


E-MTAB-4850:CL-Stim 24

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-4850:CL-Stim 24

characteristic: Submitter Id

text: ArrayExpress

text: immortal cell line cell

text: CD8-Positive T-Lymphocytes

text: human

text: hepatitis C infection

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

characteristic: sex

text: 10 cells

characteristic: single cell well quality

text: CL-Stim 24


text: public

characteristic: age

text: ArrayExpress

characteristic: broker name

text: immortal cell line cell

characteristic: cell line

text: CD8-Positive T-Lymphocytes

characteristic: cell type

text: human

characteristic: common name

characteristic: description

text: hepatitis C infection

characteristic: disease

text: clearance

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: 10 cells


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

tag: Namespace:Department of Molecular Microbiology John Innes Centre

text: ArrayExpress

text: Protocols: SBW25 WT and Δhfq cultures were grown at 28°C in M9 medium supplemented with 0.4% pyruvate and 0.4% casamino acids to the late exponential phase. Cells were harvested by rapid filtration as described in Oh et al. (2011) Cell 147(6):1295-1308. Collected cells were flash frozen in liquid nitrogen and cryogenically pulverized by mixer milling (Retsch). Pulverized cells were thawed and clarified by centrifugation. Resulting lysates were digested with MNase, quenched with EGTA and resolved by sucrose density gradient ultracentrifugation. Ribosome-protected mRNA footprints were processed as previously described in Becker et al.(2013) Nat Protoc 8(11):2212-2239. Sequencing library was prepared as described in Oh et al. (2011) Cell 147(6):1295-1308. Briefly, RNA extracted from monosome fractions was size selected for 28 to 42 nucleotides by running on a 15% TBE-urea gel using a 10 bp ladder as the standard. The 3′ ends of RNA were dephosphorylated by T4 PNK and then ligated to the linker 5′_App/CTGTAGGCACCATCAAT/3 ddC_3′. The ligated products were size selected for 45 to 60 nucleotides and reverse transcribed with no more than five molar excess of 5′_5phosCAAGCAGAAGACGGCATACGAATTGATGGTGCCTACAG_3′. The reverse transcribed cDNA was size selected for 125 to 150 bp and circularised. The circDNA was PCR amplified with 5′_AATGATACGGCGACCACCGA_3′ and 5′_CAAGCAGAAGACGGCATACGA_3′ for 7 to 10 cycles and the amplicons were resolved on an 8% polyacrylamide gel in 1x TBE to excise out a band between 125 to 150 bp. The PCR amplified DNA library was quantified using the Agilent BioAnalyzer kit.

text: hfq deletion strain

characteristic: genotype

text: Pseudomonas fluorescens

characteristic: organism

text: Pseudomonas fluorescens

text: Pseudomonas fluorescens


text: Department of Molecular Microbiology John Innes Centre

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: hfq deletion strain

text: Pseudomonas fluorescens

text: Pseudomonas fluorescens

text: Pseudomonas fluorescens

characteristic: title


text: public

text: ArrayExpress

characteristic: broker name

text: wild type gentoype

text: Pseudomonas fluorescens

text: Pseudomonas fluorescens

text: Pseudomonas fluorescens


text: public

text: ArrayExpress

text: wild type genotype

text: Pseudomonas fluorescens

text: Pseudomonas fluorescens

text: Pseudomonas fluorescens


text: Department of Molecular Microbiology

text: public

tag: Namespace:Department of Molecular Microbiology

text: ArrayExpress

text: Protocols: Bacterial cultures were grown at 28°C in defined M9 medium supplemented with 0.4% pyruvate and 0.4% casamino acids. Tetracycline was used at 12.5 μg/ml. Total RNA was extracted from 50ml cultures grown in M9 medium supplemented with 0.4% pyruvate and 0.4% casamino acids. 30 ml of 60% RNAlater (in PBS) was added to each tube, and sealed tubes were vortexed and centrifuged for 10 min at 4°C. The pellets were resuspended in 1x PBS and chilled β-mercaptoethanol RT solution, and lysed by mechanical disruption. Finally, RNA was purified from the lysate by column capture using an RNeasy Mini Kit (Qiagen). Purified RNA was subjected to an additional DNase treatment (TurboTM DNase, Ambion), and RNA quantification was performed with an ND-1000 Spectrophotometer. mRNA libraries were prepared by the sequencing contractor using the TruSeq Stranded mRNA Library Prep Kit from Illumina.

text: hfq deletion strain

text: Pseudomonas fluorescens

text: Pseudomonas fluorescens

text: Pseudomonas fluorescens

characteristic: strain


text: Department of Molecular Microbiology

text: public

text: ArrayExpress

characteristic: description

text: wild type genotype

text: Pseudomonas fluorescens

text: Pseudomonas fluorescens

text: Pseudomonas fluorescens


text: public

text: Enterobacter cloacae

text: Enterobacter cloacae


text: University Hospital Galway

text: public

tag: Namespace:University Hospital Galway

characteristic: collection date

text: Ireland

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: host scientific name

characteristic: isolate

text: Human

characteristic: isolation source

text: Salmonella enterica subsp. enterica serovar Typhimurium

text: Typhimurium

characteristic: serovar

text: Subsp. I

characteristic: sub species


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University Hospital Galway

characteristic: INSDC center name

text: public

text: Ireland

text: Homo sapiens

text: Human

text: Salmonella enterica subsp. enterica serovar Enteritidis

characteristic: organism

text: Enteritidis

text: Subsp. I


text: University Hospital Galway

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Ireland

text: Homo sapiens

text: Human

text: Salmonella enterica subsp. enterica serovar Typhi

text: Typhi

text: Subsp. I

characteristic: title


text: University Hospital Galway

text: public

characteristic: collection date

text: Ireland

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: host scientific name

text: Human

text: Salmonella enterica subsp. enterica serovar Newport

text: Newport

text: Subsp. I


text: University Hospital Galway

text: public

text: Ireland

text: Homo sapiens

characteristic: isolate

text: Human

characteristic: isolation source

text: Salmonella enterica subsp. enterica serovar Typhimurium var. monophasic 4,[5],12:i:-

characteristic: serovar

text: Subsp. I


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: University Hospital Galway

text: public

text: Ireland

text: Homo sapiens

text: Human

text: Salmonella enterica subsp. enterica serovar Kentucky

text: Kentucky

text: Subsp. I

characteristic: sub species


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University Hospital Galway

characteristic: INSDC center name

text: public

text: Ireland

text: Homo sapiens

text: Human

text: Salmonella enterica subsp. enterica serovar Heidelberg

text: Heidelberg

text: Subsp. I


text: BANG

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: squinting bush brown

characteristic: common name

text: PacBio data used in the Bicyclus anynana genome project

characteristic: description

text: Bicyclus anynana

characteristic: organism

text: Bicyclus anynana

text: Bicyclus anynana PacBio data


text: UOM

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: house mouse

text: Protocols: The preparation of the material was as described in Kutejova et al., 2008. Second branchial arches, and posterior branchial arches connected to OFT were dissected (the whole tissue), crosslinked and frozen in order to pool enough for ChIP. Kutejova E, Engist B, Self M, Oliver G, Kirilenko P, Bobola N. Six2 functions redundantly immediately downstream of Hoxa2. Development. 2008. 135(8):1463-70. PMID: 18321982. MinElute PCR purification kit (Qiagen) ChIP-seq was performed as described in Donaldson et al., 2012, using 20 ug of Gata6 antibody (Cell Signaling, D61E4 XP) and 20 ug of H3K27Ac antibody (Abcam, ab4729). Donaldson I, Amin S, Hensman J, Kutejova E, Rattray M, Lawrence N, Hayes A, Ward C and Bobola N. Genome-wide occupancy links Hoxa2 to Wnt-beta-catenin signaling in mouse embryonic development. Nucleic Acids Res. 2012. 40(9):3990-4001. 70 to 100 arches were used for each sample. Library preparation was performed using the TruSeq ChIP Sample Preparation kit (Illumina).

characteristic: developmental stage

text: Mus musculus

text: Mus musculus

characteristic: organism part

text: Mus musculus

characteristic: strain

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UOM

text: public

text: ArrayExpress

text: house mouse

text: Mus musculus

text: Mus musculus

text: posterior branchial arches connected to OFT

text: Mus musculus


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UOM

text: public

text: ArrayExpress

text: house mouse

text: Mus musculus

text: Mus musculus

text: second branchial arch

text: Mus musculus


text: Fraunhofer IZI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:Fraunhofer IZI

text: human

text: Homo sapiens

text: Homo sapiens

text: Hearth Valve

characteristic: tissue type

text: 16S amplification of human hearth valve sample


text: University of Wisconsin Madison

characteristic: INSDC last update

text: public

tag: Namespace:University of Wisconsin Madison

characteristic: collection date

text: collaborative cross founder strains 16S V2

characteristic: description

text: highFat

characteristic: diet

text: animal-associated habitat

characteristic: environment (biome)

text: mammalian-associated habitat

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: mouse gut metagenome

text: Host genotype and gut microbiome modulate insulin secretion and diet-induced metabolic phenotypes

characteristic: project name

text: mouse gut metagenome

text: 454 GS Junior

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Wisconsin Madison

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: control

text: animal-associated habitat

text: mammalian-associated habitat

text: feces

text: USA

text: host-associated

text: mimarks-survey

text: mouse gut metagenome

characteristic: organism

text: mouse gut metagenome

text: 454 GS Junior

characteristic: strain

characteristic: title


text: University of Wisconsin Madison

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: collection date

characteristic: description

text: highFat

characteristic: diet

text: animal-associated habitat

characteristic: environment (biome)

text: mammalian-associated habitat

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: host-associated

text: mimarks-survey

text: mouse gut metagenome

text: mouse gut metagenome

text: 454 GS Junior

text: A/J


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Wisconsin Madison

characteristic: INSDC center name

text: public

text: control

text: animal-associated habitat

text: mammalian-associated habitat

text: feces

text: USA

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: mouse gut metagenome

characteristic: project name

text: mouse gut metagenome

text: 454 GS Junior

characteristic: sequencing method

text: A/J


text: University of Wisconsin Madison

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: highFat

text: animal-associated habitat

text: mammalian-associated habitat

text: feces

text: USA

text: host-associated

text: mimarks-survey

text: mouse gut metagenome

characteristic: organism

text: mouse gut metagenome

text: 454 GS Junior

text: CAST/EiJ

characteristic: strain

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Wisconsin Madison

text: public

text: control

characteristic: diet

text: animal-associated habitat

characteristic: environment (biome)

text: mammalian-associated habitat

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: host-associated

text: mimarks-survey

text: mouse gut metagenome

text: mouse gut metagenome

text: 454 GS Junior

text: CAST/EiJ


text: University of Wisconsin Madison

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: highFat

text: animal-associated habitat

text: mammalian-associated habitat

text: feces

text: USA

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: mouse gut metagenome

characteristic: project name

text: mouse gut metagenome

text: 454 GS Junior

characteristic: sequencing method

text: NOD/ShiLtJ


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Wisconsin Madison

text: public

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: control

text: animal-associated habitat

text: mammalian-associated habitat

text: feces

text: USA

text: host-associated

text: mimarks-survey

text: mouse gut metagenome

characteristic: organism

text: mouse gut metagenome

text: 454 GS Junior

text: NOD/ShiLtJ

characteristic: strain

characteristic: title


text: University of Wisconsin Madison

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: highFat

characteristic: diet

text: animal-associated habitat

characteristic: environment (biome)

text: mammalian-associated habitat

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: host-associated

text: mimarks-survey

text: mouse gut metagenome

text: mouse gut metagenome

text: 454 GS Junior

text: NZO/HILtJ


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Wisconsin Madison

text: public

characteristic: SRA accession

text: control

text: animal-associated habitat

text: mammalian-associated habitat

text: feces

text: USA

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: mouse gut metagenome

characteristic: project name

text: mouse gut metagenome

text: 454 GS Junior

characteristic: sequencing method

text: NZO/HILtJ


text: University of Wisconsin Madison

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: highFat

text: animal-associated habitat

text: mammalian-associated habitat

text: feces

text: USA

text: host-associated

text: mimarks-survey

text: mouse gut metagenome

characteristic: organism

text: mouse gut metagenome

text: 454 GS Junior

text: PWK/PhJ

characteristic: strain

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Wisconsin Madison

text: public

text: control

characteristic: diet

text: animal-associated habitat

characteristic: environment (biome)

text: mammalian-associated habitat

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: host-associated

text: mimarks-survey

text: mouse gut metagenome

text: mouse gut metagenome

text: 454 GS Junior

text: PWK/PhJ


text: University of Wisconsin Madison

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: highFat

text: animal-associated habitat

text: mammalian-associated habitat

text: feces

text: USA

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: mouse gut metagenome

characteristic: project name

text: mouse gut metagenome

text: 454 GS Junior

characteristic: sequencing method

text: WSB/EiJ


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Wisconsin Madison

text: public

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: control

text: animal-associated habitat

text: mammalian-associated habitat

text: feces

text: USA

text: host-associated

text: mimarks-survey

text: mouse gut metagenome

characteristic: organism

text: mouse gut metagenome

text: 454 GS Junior

text: WSB/EiJ

characteristic: strain

characteristic: title


text: UNIVERSITY CENTER IN SVALBARD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Latitude End

characteristic: Longitude End

characteristic: depth

text: sampled 5, 15, 35 and 150m at june 15th and july 12th 2011

text: marine

characteristic: environment (biome)

text: arctic

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: water

characteristic: environmental package

characteristic: event date/time

characteristic: latitude start

characteristic: longitude start

text: Arctic Ocean

characteristic: marine region

text: marine metagenome

text: BAB spring 2011

text: filtration and conservation

characteristic: protocol label

characteristic: salinity

text: Billefjorden spring 2011

characteristic: sampling campaign

text: research vessel Viking Explorer

characteristic: sampling platform

text: BAB

characteristic: sampling site

text: marine metagenome

characteristic: temperature

text: 18S rDNA amplicons


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: batch

text: beer-associated microbial community

characteristic: description

text: true

characteristic: elevation

text: urban biome

characteristic: env biome

text: building

characteristic: env feature

text: microbial mat/biofilm

characteristic: env package

text: beer

text: USA:CA

characteristic: geo loc name

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: food fermentation metagenome

characteristic: organism

text: UCDAES

text: false

text: TRUE

characteristic: public

text: beer-associated microbial community

characteristic: sample type

text: food fermentation metagenome

characteristic: title

text: Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: beer-associated microbial community

text: true

text: urban biome

text: building

text: microbial mat/biofilm

text: beer

text: USA:CA

text: food fermentation metagenome

text: UCDAES

text: false

text: TRUE

text: beer-associated microbial community

text: food fermentation metagenome


text: UCSDMI

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: batch

text: microbial community from wine

characteristic: day

characteristic: description

text: True

characteristic: elevation

text: urban biome

characteristic: env biome

text: anthropogenic environmental feature

characteristic: env feature

text: misc environment

characteristic: env package

text: wine

text: USA:CA

text: True

characteristic: inoculated

text: wine metagenome

text: UCDavis

text: False

text: TRUE

text: wine

text: wine metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

text: microbial community from wine

text: True

text: urban biome

text: anthropogenic environmental feature

text: misc environment

text: wine

text: USA:CA

characteristic: geo loc name

characteristic: host subject id

text: False

characteristic: latitude

characteristic: longitude

text: wine metagenome

characteristic: organism

text: UCDavis

text: False

text: TRUE

characteristic: public

text: wine

characteristic: sample type

text: wine metagenome

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: batch

text: microbial community from wine

characteristic: day

text: True

text: urban biome

text: anthropogenic environmental feature

text: misc environment

text: wine

text: USA:CA

text: True

text: wine metagenome

text: UCDavis

text: False

text: TRUE

text: wine

text: wine metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

text: microbial community from wine

characteristic: description

text: True

characteristic: elevation

text: urban biome

characteristic: env biome

text: anthropogenic environmental feature

characteristic: env feature

text: misc environment

characteristic: env package

text: wine

text: USA:CA

characteristic: geo loc name

characteristic: host subject id

text: False

characteristic: inoculated

text: wine metagenome

text: UCDavis

text: False

text: TRUE

text: wine

text: wine metagenome


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:Division of Microbial Ecology University of Vienna

text: Mucispirillum schaedleri ASF457

characteristic: organism

text: Mucispirillum schaedleri ASF457

text: Genome of Mucispirillum schaedleri ASF457

characteristic: title


text: UMC Utrecht

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:UMC Utrecht

characteristic: Submitter Id

characteristic: collection date

text: Netherlands

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: serum biological replicate 1

characteristic: isolate

text: organic material

characteristic: isolation source

text: 52.0833 N 5.1167 E

characteristic: lat lon

text: Enterococcus faecium

text: Enterococcus faecium

characteristic: strain

text: RNA-Seq reads of growth in serum, biological replicate 1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UMC Utrecht

text: public

text: Netherlands

text: not provided

text: Homo sapiens

text: serum biological replicate 2

text: organic material

text: 52.0833 N 5.1167 E

text: Enterococcus faecium

text: Enterococcus faecium

text: RNA-Seq reads of growth in serum, biological replicate 2


text: UMC Utrecht

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Netherlands

text: not provided

text: Homo sapiens

text: serum biological replicate 3

text: organic material

text: 52.0833 N 5.1167 E

text: Enterococcus faecium

characteristic: organism

text: Enterococcus faecium

text: RNA-Seq reads of growth in serum, biological replicate 3

characteristic: title


text: UMC Utrecht

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Netherlands

text: not provided

text: Homo sapiens

text: bhi/control biological replicate 1

text: organic material

text: 52.0833 N 5.1167 E

text: Enterococcus faecium

text: Enterococcus faecium

text: RNA-Seq reads of growth in BHI, biological replicate 1


text: UMC Utrecht

text: public

characteristic: collection date

text: Netherlands

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: bhi/control biological replicate 2

text: organic material

text: 52.0833 N 5.1167 E

text: Enterococcus faecium

text: Enterococcus faecium

text: RNA-Seq reads of growth in BHI, biological replicate 2


text: UMC Utrecht

text: public

text: Netherlands

text: not provided

text: Homo sapiens

text: bhi/control biological replicate 3

characteristic: isolate

text: organic material

characteristic: isolation source

text: 52.0833 N 5.1167 E

characteristic: lat lon

text: Enterococcus faecium

text: Enterococcus faecium

characteristic: strain

text: RNA-Seq reads of growth in BHI, biological replicate 3


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UPSC

text: public

text: Alcocks spruce

characteristic: common name

text: Voucher 19770679 The Arboretum at Horsholm; cultivated from germplasm collected at Nishidake Nagano Japan

characteristic: description

text: Picea alcoquiana

text: Picea alcoquiana

text: Picea alcoquiana cultivated at The Arboretum at Horsholm University of Copenhagen Denmark