characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E5La.feces.27wAntibiotic.HFD.MupHe.8

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 164

characteristic: cage

text: Antibiotic-MupHe-HFD (6M)

characteristic: description

text: HFD

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: D

characteristic: experiment group

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: normal

characteristic: latitude

text: adult

characteristic: longitude

text: Group58-Antibiotic-MupHe-HFD (6M)

text: sample 427

text: mouse gut metagenome

text: NASH, obesity, ABX

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 6 months

text: grams


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E5La.feces.27wAntibiotic.HFD.MupHe.9

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: Yes (Ampicillin, Vancomycin, Neomycin sulfate and Metronidazole )

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 164

text: Antibiotic-MupHe-HFD (6M)

text: HFD

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: D

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: normal

characteristic: immune status

text: adult

characteristic: life stage

text: Group58-Antibiotic-MupHe-HFD (6M)

characteristic: mice group

text: sample 428

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: NASH, obesity, ABX

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 6 months

characteristic: timepoint

text: Steatohepatitis progresses to cancer via immunosuppression of HCC directed by CD8+Tcells

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit

type: has member


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E9L.feces.HFD.IgMk.Mup.1

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 121

characteristic: cage

text: IgMkMup-HFD (10-11M)

characteristic: description

text: HFD

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: D

characteristic: experiment group

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: no Ig M - some susceptibility

characteristic: latitude

text: adult

characteristic: longitude

text: Group27-IgMkMup-HFD (10-11M)

text: sample 273

text: mouse gut metagenome

text: NASH, obese, HCC, no IgM

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 11 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E9L.feces.HFD.IgMk.Mup.2

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 121

text: IgMkMup-HFD (10-11M)

text: HFD

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: D

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: no Ig M - some susceptibility

characteristic: immune status

text: adult

characteristic: life stage

text: Group27-IgMkMup-HFD (10-11M)

characteristic: mice group

text: sample 274

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: NASH, obese, HCC, no IgM

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 11 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E9L.feces.NC.CLM.Mup.6

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 31

characteristic: cage

text: MupHe-NC (10-11M)

characteristic: description

text: NC

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: C

characteristic: experiment group

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: normal

characteristic: latitude

text: adult

characteristic: longitude

text: Group 4-MupHe-NC (10-11M)

text: sample 58

text: mouse gut metagenome

text: NASH,lean, adenomas

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 11 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.E9L.feces.NC.MupHe.4

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 30

text: MupHe-NC (10-11M)

text: NC

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: C

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: normal

characteristic: immune status

text: adult

characteristic: life stage

text: Group 4-MupHe-NC (10-11M)

characteristic: mice group

text: sample 57

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: NASH,lean, adenomas

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 11 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.Ex3.HFD.10.feces.MupHe.1

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 6

characteristic: cage

text: MupHe-HFD (10-11M)

characteristic: description

text: HFD

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: D

characteristic: experiment group

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: normal

characteristic: latitude

text: adult

characteristic: longitude

text: Group 3-MupHe-HFD (10-11M)

text: sample 14

text: mouse gut metagenome

text: NASH, obesity, HCC

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 11 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.Ex3.HFD.10.feces.MupHe.2

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 6

text: MupHe-HFD (10-11M)

text: HFD

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: D

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: normal

characteristic: immune status

text: adult

characteristic: life stage

text: Group 3-MupHe-HFD (10-11M)

characteristic: mice group

text: sample 15

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: NASH, obesity, HCC

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 11 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.Ex3.HFD.10.feces.MupHe.3

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 6

characteristic: cage

text: MupHe-HFD (10-11M)

characteristic: description

text: HFD

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: D

characteristic: experiment group

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: normal

characteristic: latitude

text: adult

characteristic: longitude

text: Group 3-MupHe-HFD (10-11M)

text: sample 16

text: mouse gut metagenome

text: NASH, obesity, HCC

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 11 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.Ex3.HFD.10.feces.MupHe.4

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 6

text: MupHe-HFD (10-11M)

text: HFD

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: D

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: normal

characteristic: immune status

text: adult

characteristic: life stage

text: Group 3-MupHe-HFD (10-11M)

characteristic: mice group

text: sample 17

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: NASH, obesity, HCC

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 11 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.Ex3.HFD.10.feces.MupHe.5

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 6

characteristic: cage

text: MupHe-HFD (10-11M)

characteristic: description

text: HFD

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: D

characteristic: experiment group

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: normal

characteristic: latitude

text: adult

characteristic: longitude

text: Group 3-MupHe-HFD (10-11M)

text: sample 18

text: mouse gut metagenome

text: NASH, obesity, HCC

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 11 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.Ex3.HFD.11.feces.Mup.IgA..7

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 62

text: IgAk-HFD (10-11M)

text: HFD

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: B

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: no IgA - some susceptibility

characteristic: immune status

text: adult

characteristic: life stage

text: Group15-IgAk-HFD (10-11M)

characteristic: mice group

text: sample 153

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: obese no IgA

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 11 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.Ex3.HFD.11.feces.MupplusIgA..10

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 63

characteristic: cage

text: IgAkMup-HFD (10-11M)

characteristic: description

text: HFD

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: D

characteristic: experiment group

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: no IgA - some susceptibility

characteristic: latitude

text: adult

characteristic: longitude

text: Group11-IgAkMup-HFD (10-11M)

text: sample 123

text: mouse gut metagenome

text: NASH, HCC, no IgA

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 11 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.Ex3.HFD.11.feces.MupplusIgA..11

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 63

text: IgAkMup-HFD (10-11M)

text: HFD

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: D

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: no IgA - some susceptibility

characteristic: immune status

text: adult

characteristic: life stage

text: Group11-IgAkMup-HFD (10-11M)

characteristic: mice group

text: sample 124

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: NASH, HCC, no IgA

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 11 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.Ex3.HFD.11.feces.MupplusIgA..6

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 62

characteristic: cage

text: IgAkMup-HFD (10-11M)

characteristic: description

text: HFD

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: D

characteristic: experiment group

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: no IgA - some susceptibility

characteristic: latitude

text: adult

characteristic: longitude

text: Group11-IgAkMup-HFD (10-11M)

text: sample 120

text: mouse gut metagenome

text: NASH, HCC, no IgA

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 11 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.Ex3.HFD.11.feces.MupplusIgA..8

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 62

text: IgAkMup-HFD (10-11M)

text: HFD

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: D

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: no IgA - some susceptibility

characteristic: immune status

text: adult

characteristic: life stage

text: Group11-IgAkMup-HFD (10-11M)

characteristic: mice group

text: sample 121

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: NASH, HCC, no IgA

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 11 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.Ex3.HFD.11.feces.MupplusIgA..9

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 63

characteristic: cage

text: IgAkMup-HFD (10-11M)

characteristic: description

text: HFD

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: D

characteristic: experiment group

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: no IgA - some susceptibility

characteristic: latitude

text: adult

characteristic: longitude

text: Group11-IgAkMup-HFD (10-11M)

text: sample 122

text: mouse gut metagenome

text: NASH, HCC, no IgA

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 11 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.Ex3.NoHFD.10.feces.MupHe.12

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 27

text: MupHe-NC (10-11M)

text: NC

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: C

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: normal

characteristic: immune status

text: adult

characteristic: life stage

text: Group 4-MupHe-NC (10-11M)

characteristic: mice group

text: sample 50

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: NASH,lean, adenomas

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 11 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.Ex3.NoHFD.10.feces.MupHe.13

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 27

characteristic: cage

text: MupHe-NC (10-11M)

characteristic: description

text: NC

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: C

characteristic: experiment group

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: normal

characteristic: latitude

text: adult

characteristic: longitude

text: Group 4-MupHe-NC (10-11M)

text: sample 51

text: mouse gut metagenome

text: NASH,lean, adenomas

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: 11 months

text: Steatohepatitis progresses to cancer via immunosuppression of HCC directed by CD8+Tcells

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.Ex3.NoHFD.10.feces.MupHe.14

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 27

text: MupHe-NC (10-11M)

text: NC

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: C

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: normal

characteristic: immune status

text: adult

characteristic: life stage

text: Group 4-MupHe-NC (10-11M)

characteristic: mice group

text: sample 52

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: NASH,lean, adenomas

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: strain

text: 11 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.FVB.B.TGFbR.Feces.10w.NC.1.37

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 152

characteristic: cage

text: NC-FVB-B-TGFbR

characteristic: description

text: NC

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: F

characteristic: experiment group

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: B cell signaling

characteristic: latitude

text: adult

characteristic: longitude

text: Group46-NC-FVB-B-TGFbR (2-3M)

text: sample 382

text: mouse gut metagenome

text: TGFbrko

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: FVB

text: 2-3 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.FVB.B.TGFbR.Feces.10w.NC.2.38

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 152

text: NC-FVB-B-TGFbR

text: NC

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: F

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: B cell signaling

characteristic: immune status

text: adult

characteristic: life stage

text: Group46-NC-FVB-B-TGFbR (2-3M)

characteristic: mice group

text: sample 383

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: TGFbrko

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

text: FVB

characteristic: strain

text: 2-3 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.FVB.B.TGFbR.Feces.10w.NC.3.39

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 152

characteristic: cage

text: NC-FVB-B-TGFbR

characteristic: description

text: NC

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: F

characteristic: experiment group

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: B cell signaling

characteristic: latitude

text: adult

characteristic: longitude

text: Group46-NC-FVB-B-TGFbR (2-3M)

text: sample 384

text: mouse gut metagenome

text: TGFbrko

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: FVB

text: 2-3 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.FVB.B.TGFbR.Feces.11w.NC.4.41

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 153

text: NC-FVB-B-TGFbR

text: NC

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: F

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: B cell signaling

characteristic: immune status

text: adult

characteristic: life stage

text: Group46-NC-FVB-B-TGFbR (2-3M)

characteristic: mice group

text: sample 385

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: TGFbrko

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

text: FVB

characteristic: strain

text: 2-3 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.FVB.B.TGFbR.Feces.11w.NC.5.42

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 153

characteristic: cage

text: NC-FVB-B-TGFbR

characteristic: description

text: NC

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: F

characteristic: experiment group

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: B cell signaling

characteristic: latitude

text: adult

characteristic: longitude

text: Group46-NC-FVB-B-TGFbR (2-3M)

text: sample 386

text: mouse gut metagenome

text: TGFbrko

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: FVB

text: 2-3 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.FVB.B.TGFbR.Feces.11w.NC.6.43

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 153

text: NC-FVB-B-TGFbR

text: NC

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: F

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: B cell signaling

characteristic: immune status

text: adult

characteristic: life stage

text: Group46-NC-FVB-B-TGFbR (2-3M)

characteristic: mice group

text: sample 387

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: TGFbrko

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

text: FVB

characteristic: strain

text: 2-3 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.FVB.CD8k.Feces.20w.NC.1.56

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 159

characteristic: cage

characteristic: description

text: NC

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: F

characteristic: experiment group

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: CD8KO - some susceptibility

characteristic: latitude

text: adult

characteristic: longitude

text: Group54-NC-FVB-CD8k (2-4M)

text: sample 409

text: mouse gut metagenome

text: FVB, CD8ko

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: FVB

text: 2-4 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.FVB.CD8k.Feces.20w.NC.2.57

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 159

text: NC

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: F

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: CD8KO - some susceptibility

characteristic: immune status

text: adult

characteristic: life stage

text: Group54-NC-FVB-CD8k (2-4M)

characteristic: mice group

text: sample 410

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: FVB, CD8ko

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

text: FVB

characteristic: strain

text: 2-4 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.FVB.CD8k.Feces.7w.NC.3.58

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 160

characteristic: cage

characteristic: description

text: NC

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: F

characteristic: experiment group

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: CD8KO - some susceptibility

characteristic: latitude

text: adult

characteristic: longitude

text: Group54-NC-FVB-CD8k (2-4M)

text: sample 411

text: mouse gut metagenome

text: FVB, CD8ko

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: FVB

text: 2-4 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.FVB.CD8k.Feces.7w.NC.4.59

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 160

text: NC

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: F

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: CD8KO - some susceptibility

characteristic: immune status

text: adult

characteristic: life stage

text: Group54-NC-FVB-CD8k (2-4M)

characteristic: mice group

text: sample 412

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: FVB, CD8ko

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

text: FVB

characteristic: strain

text: 2-4 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.FVB.Feces.25w.NC.1.54

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 157

characteristic: cage

text: NC-FVB

characteristic: description

text: NC

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: F

characteristic: experiment group

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: normal

characteristic: latitude

text: adult

characteristic: longitude

text: Group53-NC-FVB (6M)

text: sample 407

text: mouse gut metagenome

text: FVB lean

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: FVB

text: 5 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.FVB.Feces.25w.NC.2.55

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 158

text: NC-FVB

text: NC

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: F

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: normal

characteristic: immune status

text: adult

characteristic: life stage

text: Group53-NC-FVB (6M)

characteristic: mice group

text: sample 408

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: FVB lean

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

text: FVB

characteristic: strain

text: 5 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.FVB.IgAK.Feces.16w.NC.1.30

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 151

characteristic: cage

text: NC-FVB-IgAk

characteristic: description

text: NC

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: F

characteristic: experiment group

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: no IgA - some susceptibility

characteristic: latitude

text: adult

characteristic: longitude

text: Group45-NC-FVB-IgAk (4M)

text: sample 377

text: mouse gut metagenome

text: no IgA

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: FVB

text: 4 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.FVB.IgAK.Feces.16w.NC.2.31

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 151

text: NC-FVB-IgAk

text: NC

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: F

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: no IgA - some susceptibility

characteristic: immune status

text: adult

characteristic: life stage

text: Group45-NC-FVB-IgAk (4M)

characteristic: mice group

text: sample 378

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: no IgA

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

text: FVB

characteristic: strain

text: 4 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.FVB.IgAK.Feces.16w.NC.3.32

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 151

characteristic: cage

text: NC-FVB-IgAk

characteristic: description

text: NC

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: F

characteristic: experiment group

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: no IgA - some susceptibility

characteristic: latitude

text: adult

characteristic: longitude

text: Group45-NC-FVB-IgAk (4M)

text: sample 379

text: mouse gut metagenome

text: no IgA

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: FVB

text: 4 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.FVB.IgAK.Feces.16w.NC.4.33

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 151

text: NC-FVB-IgAk

text: NC

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: F

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: no IgA - some susceptibility

characteristic: immune status

text: adult

characteristic: life stage

text: Group45-NC-FVB-IgAk (4M)

characteristic: mice group

text: sample 380

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: no IgA

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

text: FVB

characteristic: strain

text: 4 months

characteristic: timepoint

text: Steatohepatitis progresses to cancer via immunosuppression of HCC directed by CD8+Tcells

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.FVB.IgAK.Feces.16w.NC.5.34

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 151

characteristic: cage

text: NC-FVB-IgAk

characteristic: description

text: NC

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: F

characteristic: experiment group

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: no IgA - some susceptibility

characteristic: latitude

text: adult

characteristic: longitude

text: Group45-NC-FVB-IgAk (4M)

text: sample 381

text: mouse gut metagenome

text: no IgA

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: FVB

text: 4 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.FVB.JH.Feces.11w.NC.1.22

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 149

text: NC-JH

text: NC

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: F

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: no B cells

characteristic: immune status

text: adult

characteristic: life stage

text: Group44-NC-JH (2-3M)

characteristic: mice group

text: sample 371

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: no B cell

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

text: FVB

characteristic: strain

text: 2-3 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.FVB.JH.Feces.11w.NC.2.23

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 149

characteristic: cage

text: NC-JH

characteristic: description

text: NC

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: F

characteristic: experiment group

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: no B cells

characteristic: latitude

text: adult

characteristic: longitude

text: Group44-NC-JH (2-3M)

text: sample 372

text: mouse gut metagenome

text: no B cell

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: FVB

text: 2-3 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.FVB.JH.Feces.11w.NC.3.24

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 149

text: NC-JH

text: NC

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: F

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: no B cells

characteristic: immune status

text: adult

characteristic: life stage

text: Group44-NC-JH (2-3M)

characteristic: mice group

text: sample 373

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: no B cell

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

text: FVB

characteristic: strain

text: 2-3 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.FVB.JH.Feces.9w.NC.4.25

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 150

characteristic: cage

text: NC-JH

characteristic: description

text: NC

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: F

characteristic: experiment group

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: no B cells

characteristic: latitude

text: adult

characteristic: longitude

text: Group44-NC-JH (2-3M)

text: sample 374

text: mouse gut metagenome

text: no B cell

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: FVB

text: 2-3 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.FVB.JH.Feces.9w.NC.5.26

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 150

text: NC-JH

text: NC

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: F

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: no B cells

characteristic: immune status

text: adult

characteristic: life stage

text: Group44-NC-JH (2-3M)

characteristic: mice group

text: sample 375

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: no B cell

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

text: FVB

characteristic: strain

text: 2-3 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.FVB.JH.Feces.9w.NC.6.27

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 150

characteristic: cage

text: NC-JH

characteristic: description

text: NC

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: F

characteristic: experiment group

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: no B cells

characteristic: latitude

text: adult

characteristic: longitude

text: Group44-NC-JH (2-3M)

text: sample 376

text: mouse gut metagenome

text: no B cell

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: FVB

text: 2-3 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.FVB.TGFbRff.Feces.10w.NC.1.35

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 152

text: NC-FVB-TGFbRff

text: NC

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: F

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: normal

characteristic: immune status

text: adult

characteristic: life stage

text: Group47-NC-FVB-TGFbRff (2-3M)

characteristic: mice group

text: sample 388

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: TGFbRflox/flox

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

text: FVB

characteristic: strain

text: 2-3 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.FVB.TGFbRff.Feces.10w.NC.2.36

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 152

characteristic: cage

text: NC-FVB-TGFbRff

characteristic: description

text: NC

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: F

characteristic: experiment group

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: normal

characteristic: latitude

text: adult

characteristic: longitude

text: Group47-NC-FVB-TGFbRff (2-3M)

text: sample 389

text: mouse gut metagenome

text: TGFbRflox/flox

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: FVB

text: 2-3 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.FVB.TGFbRff.Feces.11w.NC.3.40

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

characteristic: age units

text: No

text: UBERON:gastro-intestinal system

text: UBERON:feces

text: UBERON:colon

text: Cage 153

text: NC-FVB-TGFbRff

text: NC

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: F

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: normal

characteristic: immune status

text: adult

characteristic: life stage

text: Group47-NC-FVB-TGFbRff (2-3M)

characteristic: mice group

text: sample 390

characteristic: number

text: mouse gut metagenome

characteristic: organism

text: TGFbRflox/flox

characteristic: phenotype

text: UCSD

text: FALSE

text: colon content

text: mouse gut metagenome

text: male

characteristic: sex

text: FVB

characteristic: strain

text: 2-3 months

characteristic: timepoint

characteristic: title

characteristic: weight

text: grams

characteristic: weight unit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10856:10856.FVB.TGFbRff.Feces.11w.NC.4.44

characteristic: Submitter Id

characteristic: age

characteristic: age bin

text: weeks

text: No

characteristic: antibiotics

text: UBERON:gastro-intestinal system

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:colon

characteristic: body site

text: Cage 153

characteristic: cage

text: NC-FVB-TGFbRff

characteristic: description

text: NC

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: F

characteristic: experiment group

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

characteristic: host subject id

text: normal

characteristic: latitude

text: adult

characteristic: longitude

text: Group47-NC-FVB-TGFbRff (2-3M)

text: sample 391

text: mouse gut metagenome

text: TGFbRflox/flox

text: UCSD

text: FALSE

text: colon content

characteristic: sample type

text: mouse gut metagenome

text: male

text: FVB

text: 2-3 months

text: grams


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GATECH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Sandy site. Samples include 0-5 and 20-30 cm depths

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

unit: m

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: metagenome

characteristic: organism

text: Havana

characteristic: project name

text: metagenome

text: Illumina HighSeq

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: Havana site

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NORTHERN ARIZONA UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:NORTHERN ARIZONA UNIVERSITY

text: human

characteristic: common name

text: Sinus

text: nasal cavity mucosa

text: nasal cavity mucosa

text: USA

unit: year

characteristic: host age

text: sinus

characteristic: host body site

text: disease

characteristic: host disease status

characteristic: host subject id

text: human-associated

characteristic: human associated environmental package

text: metagenome

text: chronic rhinosinusitis

characteristic: lung/nose-throat disorder

text: CRS

characteristic: lung/pulmonary disorder

text: Homo sapiens

text: Bacterial microbiota of the sinuses in CRS

text: Homo sapiens

text: Illumina


characteristic: ENA-CHECKLIST

text: NORTHERN ARIZONA UNIVERSITY

text: public

characteristic: Submitter Id

characteristic: collection date

text: human

text: Sinus

characteristic: environment (biome)

text: nasal cavity mucosa

characteristic: environment (feature)

text: nasal cavity mucosa

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sinus

text: disease

text: human-associated

text: metagenome

characteristic: investigation type

text: chronic rhinosinusitis

text: asthma

text: Homo sapiens

characteristic: organism

characteristic: project name

text: Homo sapiens

text: Illumina

characteristic: sequencing method

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NORTHERN ARIZONA UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: human

characteristic: common name

text: Sinus

text: nasal cavity mucosa

text: nasal cavity mucosa

text: USA

characteristic: host age

text: sinus

characteristic: host body site

text: disease

characteristic: host disease status

characteristic: host subject id

text: human-associated

characteristic: human associated environmental package

text: metagenome

text: chronic rhinosinusitis

text: CF

text: Homo sapiens

text: Homo sapiens

text: Illumina


characteristic: ENA-CHECKLIST

text: NORTHERN ARIZONA UNIVERSITY

text: public

characteristic: Submitter Id

characteristic: collection date

text: human

text: Sinus

characteristic: environment (biome)

text: nasal cavity mucosa

characteristic: environment (feature)

text: nasal cavity mucosa

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sinus

text: healthy

text: human-associated

text: metagenome

characteristic: investigation type

text: healthy

characteristic: lung/nose-throat disorder

text: nonCRS

characteristic: lung/pulmonary disorder

text: Homo sapiens

characteristic: organism

characteristic: project name

text: Homo sapiens

text: Illumina


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NORTHERN ARIZONA UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: human

characteristic: common name

text: USA

characteristic: host age

text: Mock

text: human-associated

text: metagenome

text: Homo sapiens

text: Homo sapiens

text: Illumina

characteristic: sequencing method

characteristic: title


characteristic: ENA-CHECKLIST

text: NORTHERN ARIZONA UNIVERSITY

text: public

characteristic: Submitter Id

characteristic: collection date

text: human

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: hmp.mock

characteristic: host subject id

text: human-associated

characteristic: human associated environmental package

text: metagenome

characteristic: investigation type

text: Homo sapiens

text: Homo sapiens

text: Illumina


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NORTHERN ARIZONA UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: human

text: USA

text: human-associated

text: metagenome

text: Homo sapiens

characteristic: organism

characteristic: project name

text: Homo sapiens

text: Illumina


text: NORTHERN ARIZONA UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: human

characteristic: common name

text: USA

characteristic: host age

text: neg.ext

text: human-associated

text: metagenome

text: Homo sapiens

text: Homo sapiens

text: Illumina

characteristic: sequencing method

characteristic: title


characteristic: ENA-CHECKLIST

text: GATECH

text: public

characteristic: Submitter Id

characteristic: collection date

text: silt loam site

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: metagenome

text: Urbana

text: metagenome

text: Illumina HighSeq

text: soil

characteristic: soil environmental package

text: Urbana site


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: OX

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: broker name

text: Neisseria meningitidis

characteristic: organism

text: Neisseria meningitidis


characteristic: ENA-CHECKLIST

text: OX

text: public

characteristic: Submitter Id

characteristic: description

text: Neisseria lactamica

text: Neisseria lactamica

characteristic: title


text: INSTITUTE OF CANCER RESEARCH

text: public

tag: Namespace:INSTITUTE OF CANCER RESEARCH

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens


text: INSTITUTE OF CANCER RESEARCH

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: HurthleAdenoma


text: UNIBE-IG

text: public

text: horse

text: Phenotype:Control - male

text: Equus caballus

text: Equus caballus

text: Control


text: UNIBE-IG

text: public

text: horse

text: Phenotype:Control - female

text: Equus caballus

text: Equus caballus

text: Control


text: UNIBE-IG

text: public

text: horse

text: Phenotype:RAO - female

text: Equus caballus

text: Equus caballus

text: RAO


text: UNIBE-IG

text: public

text: horse

text: Phenotype:RAO -female

text: Equus caballus

text: Equus caballus

text: RAO


text: UNIBE-IG

text: public

text: horse

text: Phenotype:RAO - male

text: Equus caballus

text: Equus caballus

text: RAO


text: UNIBE-IG

text: public

text: horse

text: Phenotype: RAO - male

text: Equus caballus

text: Equus caballus

text: RAO


text: public

tag: Namespace:Freie Universitat Berlin Institut fur Biologie-Mikrobiologie

text: ArrayExpress

text: Protocols: To monitor the global changes in gene expression of Staphylococcus aureus USA300 TCH1516 under hypochlorite stress by RNA-seq, cultivation was performed in Luria Bertani (LB) medium in triplicate at 37°C until cells have reached an optical density at 540 nm of 2.0. Cells were harvested by centrifugation, washed with Belitsky minimal medium (BMM) and adapted to BMM for one hour before exposure to 150 µM NaOCl stress. S. aureus cells of 3 replicate experiments were harvested before and 30 min after exposure to 150 µM NaOCl S. aureus cells were harvested before and 30 min after exposure to 150 µM NaOCl and disrupted in 3 mM EDTA/ 200 mM NaCl lysis buffer with a Precellys24 Ribolyzer. RNA isolation was performed using the phenol-chloroform-isoamylalcohol approach. After precipitation with 3 M sodium acetate and isopropanol, the total RNA was washed with cold ethanol and the pellet was solved in sterile water. Initially RNA quality was checked by Trinean Xpose (Gentbrugge,Belgium) and Agilent RNA Nano 6000 kit on Agilent 2100 Bioanalyzer (Agilent Technologies, Böblingen, Germany). Samples contaminated with DNA were treated with DNase (Qiagen), cleaned as described above and rechecked by Xpose and Agilent Bioanalyzer. Finally RNA was free of DNA with an RNA Integrity Number (RIN) > 9 and rRNA Ratio [23s / 16s] > 1.5. Ribo-Zero rRNA Removal Kit (Bacteria) from Illumina (San Diego, CA, USA) was used to remove the ribosomal RNA molecules from the isolated total RNA. Removal of rRNA was checked by Agilent RNA Pico 6000 kit on Agilent 2100 Bioanalyzer (Agilent Technologies, Böblingen, Germany). RNA was free of detectable rRNA. TruSeq Stranded mRNA Library Prep Kit from Illumina (San Diego, CA, USA) was used to prepare cDNA libraries.

text: Staphylococcus aureus subsp. aureus USA300


text: Freie Universitat Berlin Institut fur Biologie-Mikrobiologie

text: public

text: ArrayExpress


text: NATIONAL VETERINARY INSTITUTE (SVA)

text: public

tag: Namespace:NATIONAL VETERINARY INSTITUTE (SVA)

text: Paenibacillus larvae

text: Paenibacillus larvae


text: public

text: ArrayExpress

text: Protocols: To monitor the global changes in gene expression of Staphylococcus aureus USA300 TCH1516 under Allicin stress by RNA-seq, cultivation was performed in Luria Bertani (LB) medium in triplicate at 37°C until cells have reached an optical density at 540 nm of 2.0. Cells were harvested by centrifugation, washed with Belitsky minimal medium (BMM) and adapted to BMM for one hour before exposure to 300 µM Allicin stress. S. aureus cells of 3 replicate experiments were harvested before and 30 min after exposure to 300 µM Allicin S. aureus cells were harvested before and 30 min after exposure to 300 µM Allicin and disrupted in 3 mM EDTA/ 200 mM NaCl lysis buffer with a Precellys24 Ribolyzer. RNA isolation was performed using the phenol-chloroform-isoamylalcohol approach. After precipitation with 3 M sodium acetate and isopropanol, the total RNA was washed with cold ethanol and the pellet was solved in sterile water. Initially RNA quality was checked by Trinean Xpose (Gentbrugge,Belgium) and Agilent RNA Nano 6000 kit on Agilent 2100 Bioanalyzer (Agilent Technologies, Böblingen, Germany). Samples contaminated with DNA were treated with DNase (Qiagen), cleaned as described above and rechecked by Xpose and Agilent Bioanalyzer. Finally RNA was free of DNA with an RNA Integrity Number (RIN) > 9 and rRNA Ratio [23s / 16s] > 1.5. Ribo-Zero rRNA Removal Kit (Bacteria) from Illumina (San Diego, CA, USA) was used to remove the ribosomal RNA molecules from the isolated total RNA. Removal of rRNA was checked by Agilent RNA Pico 6000 kit on Agilent 2100 Bioanalyzer (Agilent Technologies, Böblingen, Germany). RNA was free of detectable rRNA. TruSeq Stranded mRNA Library Prep Kit from Illumina (San Diego, CA, USA) was used to prepare cDNA libraries.


E-MTAB-5661:Sample 100

text: EMBL-EBI

text: public

text: E-MTAB-5661:Sample 100

text: ArrayExpress

characteristic: cell line

text: embryonic stem cell

characteristic: cell type

text: house mouse

text: Protocols: Ring1A/B double knockout cells with constitutive Ring1A knockout and tamoxifen-inducible conditional Ring1B knockout were cultured on mitomycin-inactivated feeders in DMEM (lacking pyruvate; Gibco), supplemented with 10% batch-tested FCS (Labtech), 50mM ß-mercaptoethanol, L-glutamine (Gibco), Sodium Pyruvate (Gibco), Non-essential amino acids (Gibco), Penicillin/Streptomycin (Gibco) supplemented with 1000U per ml LIF (Milipore). These cell lines have been tested and were found to have no mycoplasma contamination. Feeders in Ring1AB dKO mES cells (untreated and tamoxifen-treated) are depleted using Feeder removal MicroBeads (Miltenyi Biotec). To induce Ring1b knockout, cells are cultured in media containing 800nM 4-hydroxytamoxifen (Sigma) for 48 hours and confirmed using genomic DNA isolation and PCR across Cre-excised region. OS25 cells were captured by loading the cell suspension on 10-17 micron C1 Single-Cell Auto Prep IFC, Fluidigm (without ERCC spike-ins). Ring1A knockout (untreated) and Ring1A/B double knockout cells are processed on C1 Single Cell Auto Prep System (Fluidigm; 100-7000 and 100-6209) using medium sized C1 mRNA-Seq chips (10-17 μm; 100-5670) with ERCC spike-ins (Ambion; AM1780) following the manufacturers protocol (100-5950 B1) requiring SMARTer kit for Illumina Sequencing (Clonetech; 634936). Single cell libraries were prepared using Illumina Nextera XT DNA sample preparation kit (Illumina; FC-131-1096) after cleanup and pooling using AMPure XP beads (Agencourt Biosciences; A63880).

text: embryo

characteristic: developmental stage

characteristic: genotype

text: DMEM, 10% FCS, -mercaptoethanol, L-glutamine, Sodium Pyruvate, Non-essential amino acids, Penicillin/Streptomycin, LIF

characteristic: growth condition

text: Mus musculus

text: Mus musculus

text: Ring1A knockout

characteristic: phenotype

text: Mus musculus

text: not available

characteristic: strain

text: Sample 100


E-MTAB-5661:Sample 101

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMBL-EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-5661:Sample 101

text: ArrayExpress

text: embryonic stem cell

text: house mouse

text: embryo

text: Mus musculus

text: Mus musculus

text: Ring1A knockout

text: Mus musculus

text: not available

text: Sample 101


E-MTAB-5661:Sample 102

characteristic: ENA-CHECKLIST

text: EMBL-EBI

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5661:Sample 102

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: embryonic stem cell

text: house mouse

text: embryo

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Ring1A knockout

text: Mus musculus

text: not available

text: Sample 102


E-MTAB-5661:Sample 103

text: EMBL-EBI

text: public

text: E-MTAB-5661:Sample 103

text: ArrayExpress

characteristic: cell line

text: embryonic stem cell

characteristic: cell type

text: house mouse

characteristic: common name

characteristic: description

text: embryo

characteristic: developmental stage

text: Mus musculus

text: Mus musculus

text: Ring1A knockout

text: Mus musculus

text: not available

text: Sample 103

characteristic: title


E-MTAB-5661:Sample 104

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMBL-EBI

text: public

text: E-MTAB-5661:Sample 104

text: ArrayExpress

text: embryonic stem cell

text: house mouse

text: embryo

characteristic: genotype

characteristic: growth condition

text: Mus musculus

text: Mus musculus

text: Ring1A knockout

characteristic: phenotype

text: Mus musculus

text: not available

characteristic: strain

text: Sample 104


E-MTAB-5661:Sample 105

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMBL-EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5661:Sample 105

text: ArrayExpress

text: embryonic stem cell

text: house mouse

text: embryo

text: Mus musculus

text: Mus musculus

text: Ring1A knockout

text: Mus musculus

text: not available

text: Sample 105


E-MTAB-5661:Sample 106

text: EMBL-EBI

text: public

characteristic: SRA accession

text: E-MTAB-5661:Sample 106

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: embryonic stem cell

characteristic: cell type

text: house mouse

text: embryo

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Ring1A knockout

text: Mus musculus

text: not available

text: Sample 106


E-MTAB-5661:Sample 107

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMBL-EBI

text: public

text: E-MTAB-5661:Sample 107

text: ArrayExpress

text: embryonic stem cell

text: house mouse

characteristic: common name

characteristic: description

text: embryo

characteristic: developmental stage

text: Mus musculus

text: Mus musculus

text: Ring1A knockout

text: Mus musculus

text: not available

text: Sample 107

characteristic: title


E-MTAB-5661:Sample 108

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMBL-EBI

text: public

text: E-MTAB-5661:Sample 108

text: ArrayExpress

text: embryonic stem cell

text: house mouse

text: embryo

characteristic: genotype

characteristic: growth condition

text: Mus musculus

text: Mus musculus

text: Ring1A knockout

characteristic: phenotype

text: Mus musculus

text: not available

characteristic: strain

text: Sample 108


E-MTAB-5661:Sample 109

text: EMBL-EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5661:Sample 109

characteristic: Submitter Id

text: ArrayExpress

text: embryonic stem cell

text: house mouse

text: embryo

text: Mus musculus

text: Mus musculus

text: Ring1A knockout

text: Mus musculus

text: not available

text: Sample 109


E-MTAB-5661:Sample 110

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMBL-EBI

text: public

text: E-MTAB-5661:Sample 110

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: embryonic stem cell

characteristic: cell type

text: house mouse

text: embryo

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Ring1A knockout

text: Mus musculus

text: not available

text: Sample 110


E-MTAB-5661:Sample 111

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMBL-EBI

text: public

text: E-MTAB-5661:Sample 111

text: ArrayExpress

text: embryonic stem cell

text: house mouse

characteristic: common name

characteristic: description

text: embryo

characteristic: developmental stage

text: Mus musculus

text: Mus musculus

text: Ring1A knockout

text: Mus musculus

text: not available

text: Sample 111

characteristic: title


E-MTAB-5661:Sample 112

text: EMBL-EBI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-5661:Sample 112

text: ArrayExpress

text: embryonic stem cell

text: house mouse

text: embryo

characteristic: genotype

characteristic: growth condition

text: Mus musculus

text: Mus musculus

text: Ring1A knockout

characteristic: phenotype

text: Mus musculus

text: not available

characteristic: strain

text: Sample 112


E-MTAB-5661:Sample 113

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMBL-EBI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5661:Sample 113

characteristic: Submitter Id

text: ArrayExpress

text: embryonic stem cell

text: house mouse

text: embryo

text: Mus musculus

text: Mus musculus

text: Ring1A knockout

text: Mus musculus

text: not available

text: Sample 113


E-MTAB-5661:Sample 114

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMBL-EBI

text: public

text: E-MTAB-5661:Sample 114

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: embryonic stem cell

characteristic: cell type

text: house mouse

text: embryo

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Ring1A knockout

text: Mus musculus

text: not available

text: Sample 114


E-MTAB-5661:Sample 115

text: EMBL-EBI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-5661:Sample 115

text: ArrayExpress

text: embryonic stem cell

text: house mouse

characteristic: common name

characteristic: description

text: embryo

characteristic: developmental stage

text: Mus musculus

text: Mus musculus

text: Ring1A knockout

text: Mus musculus

text: not available

text: Sample 115

characteristic: title


E-MTAB-5661:Sample 116

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMBL-EBI

text: public

text: E-MTAB-5661:Sample 116

text: ArrayExpress

text: embryonic stem cell

text: house mouse

text: embryo

characteristic: genotype

characteristic: growth condition

text: Mus musculus

text: Mus musculus

text: Ring1A knockout

characteristic: phenotype

text: Mus musculus

text: not available

characteristic: strain

text: Sample 116


E-MTAB-5661:Sample 117

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMBL-EBI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5661:Sample 117

characteristic: Submitter Id

text: ArrayExpress

text: embryonic stem cell

text: house mouse

text: embryo

text: Mus musculus

text: Mus musculus

text: Ring1A knockout

text: Mus musculus

text: not available

text: Sample 117


E-MTAB-5661:Sample 118

text: EMBL-EBI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-5661:Sample 118

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: embryonic stem cell

characteristic: cell type

text: house mouse

text: embryo

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Ring1A knockout

text: Mus musculus

text: not available

text: Sample 118


E-MTAB-5661:Sample 119

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMBL-EBI

text: public

text: E-MTAB-5661:Sample 119

text: ArrayExpress

text: embryonic stem cell

text: house mouse

characteristic: common name

characteristic: description

text: embryo

characteristic: developmental stage

text: Mus musculus

text: Mus musculus

text: Ring1A knockout

text: Mus musculus

text: not available

text: Sample 119

characteristic: title


E-MTAB-5661:Sample 120

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMBL-EBI

text: public

text: E-MTAB-5661:Sample 120

text: ArrayExpress

text: embryonic stem cell

text: house mouse

text: embryo

characteristic: genotype

characteristic: growth condition

text: Mus musculus

text: Mus musculus

text: Ring1A knockout

characteristic: phenotype

text: Mus musculus

text: not available

characteristic: strain

text: Sample 120


E-MTAB-5661:Sample 121

text: EMBL-EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5661:Sample 121

characteristic: Submitter Id

text: ArrayExpress

text: embryonic stem cell

text: house mouse

text: embryo

text: Mus musculus

text: Mus musculus

text: Ring1A knockout

text: Mus musculus

text: not available

text: Sample 121


E-MTAB-5661:Sample 122

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMBL-EBI

text: public

text: E-MTAB-5661:Sample 122

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: embryonic stem cell

characteristic: cell type

text: house mouse

text: embryo

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Ring1A knockout

text: Mus musculus

text: not available

text: Sample 122


E-MTAB-5661:Sample 123

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMBL-EBI

text: public

text: E-MTAB-5661:Sample 123

text: ArrayExpress

text: embryonic stem cell

text: house mouse

characteristic: common name

characteristic: description

text: embryo

characteristic: developmental stage

text: Mus musculus

text: Mus musculus

text: Ring1A knockout

text: Mus musculus

text: not available

text: Sample 123

characteristic: title


E-MTAB-5661:Sample 124

text: EMBL-EBI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-5661:Sample 124

text: ArrayExpress

text: embryonic stem cell

text: house mouse

text: embryo

characteristic: genotype

characteristic: growth condition

text: Mus musculus

text: Mus musculus

text: Ring1A knockout

characteristic: phenotype

text: Mus musculus

text: not available

characteristic: strain

text: Sample 124


E-MTAB-5661:Sample 125

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMBL-EBI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5661:Sample 125

characteristic: Submitter Id

text: ArrayExpress

text: embryonic stem cell

text: house mouse

text: embryo

text: Mus musculus

text: Mus musculus

text: Ring1A knockout

text: Mus musculus

text: not available

text: Sample 125


E-MTAB-5661:Sample 126

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMBL-EBI

text: public

text: E-MTAB-5661:Sample 126

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: embryonic stem cell

characteristic: cell type

text: house mouse

text: embryo

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Ring1A knockout

text: Mus musculus

text: not available

text: Sample 126


E-MTAB-5661:Sample 127

text: EMBL-EBI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-5661:Sample 127

text: ArrayExpress

text: embryonic stem cell

text: house mouse

characteristic: common name

characteristic: description

text: embryo

characteristic: developmental stage

text: Mus musculus

text: Mus musculus

text: Ring1A knockout

text: Mus musculus

text: not available

text: Sample 127

characteristic: title


E-MTAB-5661:Sample 128

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMBL-EBI

text: public

text: E-MTAB-5661:Sample 128

text: ArrayExpress

text: embryonic stem cell

text: house mouse

text: embryo

characteristic: genotype

characteristic: growth condition

text: Mus musculus

text: Mus musculus

text: Ring1A knockout

characteristic: phenotype

text: Mus musculus

text: not available

characteristic: strain

text: Sample 128


E-MTAB-5661:Sample 129

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMBL-EBI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5661:Sample 129

characteristic: Submitter Id

text: ArrayExpress

text: embryonic stem cell

text: house mouse

text: embryo

text: Mus musculus

text: Mus musculus

text: Ring1A knockout

text: Mus musculus

text: not available

text: Sample 129


E-MTAB-5661:Sample 130

text: EMBL-EBI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-5661:Sample 130

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: embryonic stem cell

characteristic: cell type

text: house mouse

text: embryo

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Ring1A knockout

text: Mus musculus

text: not available

text: Sample 130


E-MTAB-5661:Sample 131

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMBL-EBI

text: public

text: E-MTAB-5661:Sample 131

text: ArrayExpress

text: embryonic stem cell

text: house mouse

characteristic: common name

characteristic: description

text: embryo

characteristic: developmental stage

text: Mus musculus

text: Mus musculus

text: Ring1A knockout

text: Mus musculus

text: not available

text: Sample 131

characteristic: title


E-MTAB-5661:Sample 132

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMBL-EBI

text: public

text: E-MTAB-5661:Sample 132

text: ArrayExpress

text: embryonic stem cell

text: house mouse

text: embryo

characteristic: genotype

characteristic: growth condition

text: Mus musculus

text: Mus musculus

text: Ring1A knockout

characteristic: phenotype

text: Mus musculus

text: not available

characteristic: strain

text: Sample 132


E-MTAB-5661:Sample 133

text: EMBL-EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5661:Sample 133

characteristic: Submitter Id

text: ArrayExpress

text: embryonic stem cell

text: house mouse

text: embryo

text: Mus musculus

text: Mus musculus

text: Ring1A knockout

text: Mus musculus

text: not available

text: Sample 133