characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

text: false

text: false

text: Self-diagnosed

text: Not provided

text: Not provided

text: Not provided

text: false

text: Never

text: Not provided

text: No

text: false

text: false

text: false

text: true

text: false

text: false

text: Not provided

text: true

text: true

text: false

text: true

text: false

text: I do not have this condition

text: Month

text: true

text: Never

text: I do not have this condition

text: Self-diagnosed

characteristic: autoimmune

text: Not provided

characteristic: birth year

characteristic: bmi

text: Normal

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: One

text: I tend to have diarrhea (watery stool) - Type 5, 6 and 7

text: false

text: I do not have this condition

characteristic: cancer

text: Not provided

characteristic: cancer treatment

text: I do not have this condition

text: false

characteristic: cat

text: I do not have this condition

characteristic: cdiff

text: West

text: Yes

characteristic: chickenpox

characteristic: clinical condition

characteristic: collection date

text: June

characteristic: collection month

text: Summer

text: 2016-06-09 03:15

text: No

text: No

text: Never

text: USA

characteristic: country

text: United States

characteristic: country of birth

text: United States

text: false

text: Not provided

text: American Gut Project Stool Sample

text: I do not have this condition

text: Not provided

text: Omnivore

text: true

text: false

text: I am right handed

text: Bottled

text: Not provided

text: Far West

text: dense settlement biome

text: human-associated habitat

text: human-gut

text: feces

text: I do not have this condition

text: Daily

text: Both

text: Primarily infant formula

text: Daily

text: Daily

text: Never

text: Regularly (3-5 times/week)

text: USA:CA

text: I do not eat gluten because it makes me feel bad

text: true

text: centimeters

text: Regularly (3-5 times/week)

text: Daily

text: human

text: 298c88aad6c2870f738a93efa8c3b5f9da7bcf6d5f5f08d6ca900ea37227e850773c6f40429f6747497241611ed07b0c7e61b18bc7bd368e33c43f9ee1eaf8bb

text: I do not have this condition

text: Not provided

text: Not provided

text: I do not have this condition

text: true

text: Graduate or Professional degree

text: I do not have this condition

text: No

text: true

text: Daily

text: false

text: Not provided

text: false

text: false

text: false

text: false

text: false

text: false

text: false

text: true

text: Daily

text: Never

text: true

text: false

text: Not provided

text: true

text: true

text: true

text: true

text: false

text: false

text: Occasionally (1-2 times/week)

text: Daily

text: human gut metagenome

text: true

text: false

text: UCSDMI

text: true

text: I do not have this condition

text: Never

text: Occasionally (1-2 times/week)

text: false

text: Never

text: Daily

text: true

text: Caucasian

text: Never

text: Regularly (3-5 times/week)

text: No

text: Never

text: Stool

text: human gut metagenome

text: Regularly (3-5 times/week)

text: Yes

text: female

text: I do not have this condition

text: 7-8 hours

text: Never

text: No

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: CA

text: False

text: False

text: True

text: True

text: False

text: True

text: Never

text: Never

text: Daily

text: American Gut Project

text: false

text: 11 to 20

text: Daily

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

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text: Not provided

text: Not provided

text: Not provided

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text: Not provided

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text: Not provided

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text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

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text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Daily

text: Daily

text: Rarely (a few times/month)

text: Remained stable

text: kilograms

text: Daily

text: Never


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: I do not have this condition

text: false

characteristic: acne medication

text: false

text: I do not have this condition

characteristic: age cat

characteristic: age years

text: true

characteristic: alcohol consumption

text: Rarely (a few times/month)

text: Not provided

text: No

text: false

text: false

text: false

text: false

text: true

text: true

characteristic: allergic to i have no food allergies that i know of

text: Not provided

text: false

text: false

text: false

text: false

text: false

text: I do not have this condition

characteristic: alzheimers

characteristic: anonymized name

text: I have not taken antibiotics in the past year.

text: false

text: Never

text: I do not have this condition

characteristic: asd

text: I do not have this condition

text: Obese

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: One

text: I tend to have normal formed stool - Type 3 and 4

text: false

text: I do not have this condition

text: Not provided

text: I do not have this condition

text: true

text: I do not have this condition

text: West

text: Yes

text: I do not have this condition

text: June

text: Summer

characteristic: collection season

characteristic: collection time

text: 2016-06-26 18:00

text: Yes

text: No

characteristic: contraceptive

text: Never

text: USA

text: United States

text: United States

text: false

text: Not sure, but I use some form of deodorant/antiperspirant

text: Not provided

text: American Gut Project Stool Sample

text: I do not have this condition

text: Not provided

text: Omnivore

text: true

text: false

text: I am right handed

text: Filtered

text: Not provided

text: Far West

text: dense settlement biome

text: human-associated habitat

text: human-gut

text: feces

text: I do not have this condition

text: Rarely (a few times/month)

text: Outdoors

text: A mixture of breast milk and formula

text: Never

text: Never

text: Not provided

text: Regularly (3-5 times/week)

text: Occasionally (1-2 times/week)

text: I do not have this condition

text: USA:CA

text: No

text: true

text: centimeters

text: Rarely (less than once/week)

text: Rarely (less than once/week)

text: human

text: f6514a3fec9f18f25e94f2c4975a47f73d109ac9cf3e792cd078cd93bc2e5348e7ad0b6c54576dcafe4e236e9c815d6094c6866204e1078156568072f679b8fb

text: I do not have this condition

text: Not provided

text: Not provided

text: I do not have this condition

text: I do not have this condition

text: false

text: I have lived in my current state of residence for more than a year.

text: I have not been outside of my country of residence in the past year.

text: High School or GED equilivant

text: I do not have this condition

text: Yes

text: false

text: I do not have this condition

text: Daily

text: false

text: Not provided

text: false

text: false

text: false

text: false

text: false

text: false

text: false

text: true

text: I do not have this condition

text: Daily

text: Never

text: false

text: false

text: Not provided

text: false

text: true

text: false

text: false

text: false

text: false

text: Rarely (less than once/week)

text: Daily

text: human gut metagenome

text: Not provided

text: false

text: UCSDMI

text: true

text: I do not have this condition

text: Rarely (a few times/month)

text: Regularly (3-5 times/week)

text: false

text: Daily

text: Daily

text: true

text: Caucasian

text: Rarely (less than once/week)

text: Occasionally (1-2 times/week)

text: No

text: Never

text: Stool

text: human gut metagenome

text: Rarely (less than once/week)

text: No

text: male

text: I do not have this condition

text: I do not have this condition

text: 5-6 hours

text: Daily

text: No

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: CA

text: True

text: True

text: False

text: True

text: False

text: True

text: Never

text: Daily

text: Daily

text: I do not have this condition

text: American Gut Project

text: false

text: 6 to 10

text: Occasionally (1-2 times/week)

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

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text: Not provided

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text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Never

text: Never

text: Rarely (a few times/month)

text: Remained stable

text: kilograms

text: Occasionally (1-2 times/week)

text: Occasionally (1-2 times/week)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

text: I do not have this condition

text: false

text: false

text: I do not have this condition

text: false

text: Never

text: Not provided

text: No

text: false

text: false

text: false

text: true

text: false

text: false

text: Not provided

text: false

text: false

text: false

text: false

text: true

text: I do not have this condition

text: Year

text: false

text: Daily

text: I do not have this condition

text: I do not have this condition

characteristic: autoimmune

characteristic: birth year

characteristic: bmi

text: Overweight

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: Two

text: false

text: I do not have this condition

characteristic: cancer

text: Not provided

characteristic: cancer treatment

text: I do not have this condition

text: true

characteristic: cat

text: I do not have this condition

characteristic: cdiff

text: West

text: Yes

characteristic: chickenpox

text: I do not have this condition

characteristic: clinical condition

characteristic: collection date

text: June

characteristic: collection month

text: Summer

text: 2016-06-26 11:50

text: Yes

text: No

text: Never

text: USA

characteristic: country

text: United States

characteristic: country of birth

text: United States

text: false

text: I use an antiperspirant

text: Not provided

text: American Gut Project Stool Sample

text: I do not have this condition

text: Not provided

text: Omnivore

text: true

text: false

text: I am right handed

text: Well

text: Not provided

text: Far West

text: dense settlement biome

text: human-associated habitat

text: human-gut

text: feces

text: I do not have this condition

text: Daily

text: Both

text: Primarily infant formula

text: Never

text: Daily

text: Year

text: Regularly (3-5 times/week)

text: Daily

text: I do not have this condition

text: USA:CA

text: No

text: true

text: centimeters

text: Rarely (less than once/week)

text: Regularly (3-5 times/week)

text: human

text: 55ce09b75534858ec2a1a76942c4f2be2aa858976c976be2b3e0a118c0ddc39433ee9cd40147bddf9a0b837bb9cfbddb301a361c906cdaafc45ed83bbd75524e

text: I do not have this condition

text: Not provided

text: Not provided

text: I do not have this condition

text: I do not have this condition

text: false

text: 6 months

text: Bachelor's degree

text: I do not have this condition

text: Yes

text: false

text: Diagnosed by a medical professional (doctor, physician assistant)

text: Regularly (3-5 times/week)

text: true

text: Not provided

text: false

text: false

text: false

text: true

text: false

text: false

text: false

text: false

text: I do not have this condition

text: Occasionally (1-2 times/week)

text: Never

text: false

text: true

text: Not provided

text: false

text: false

text: false

text: false

text: false

text: true

text: Occasionally (1-2 times/week)

text: Occasionally (1-2 times/week)

text: human gut metagenome

text: false

text: false

text: UCSDMI

text: true

text: I do not have this condition

text: Rarely (a few times/month)

text: Regularly (3-5 times/week)

text: false

text: Occasionally (1-2 times/week)

text: Rarely (a few times/month)

text: true

text: Caucasian

text: Occasionally (1-2 times/week)

text: Occasionally (1-2 times/week)

text: No

text: Occasionally (1-2 times/week)

text: Stool

text: human gut metagenome

text: Rarely (less than once/week)

text: No

text: female

text: I do not have this condition

text: I do not have this condition

text: 7-8 hours

text: Never

text: Yes

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: CA

text: True

text: False

text: True

text: True

text: False

text: True

text: Never

text: Daily

text: Daily

text: I do not have this condition

text: American Gut Project

text: true

text: 21 to 30

text: Regularly (3-5 times/week)

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

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text: Not provided

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text: Not provided

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text: Not provided

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text: Not provided

text: Not provided

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text: Not provided

text: Not provided

text: Not provided

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text: Not provided

text: Not provided

text: Not provided

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text: Not provided

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text: Not provided

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text: Not provided

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text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Never

text: Never

text: Occasionally (1-2 times/week)

text: Remained stable

text: kilograms

text: Occasionally (1-2 times/week)

text: Daily


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: I do not have this condition

text: false

characteristic: acne medication

text: true

text: I do not have this condition

characteristic: age cat

characteristic: age years

text: true

characteristic: alcohol consumption

text: Occasionally (1-2 times/week)

text: Not provided

text: Yes

text: true

text: true

text: true

text: false

text: true

text: false

characteristic: allergic to i have no food allergies that i know of

text: Not provided

text: true

text: false

text: false

text: false

text: false

text: I do not have this condition

characteristic: alzheimers

characteristic: anonymized name

text: false

text: Daily

text: I do not have this condition

characteristic: asd

text: I do not have this condition

text: Obese

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: Three

text: false

text: I do not have this condition

text: Not provided

text: I do not have this condition

text: false

text: I do not have this condition

text: Midwest

text: Yes

text: I do not have this condition

text: June

text: Summer

characteristic: collection season

characteristic: collection time

text: 2016-06-20 05:55

text: Not sure

text: No

characteristic: contraceptive

text: Never

text: USA

text: United States

text: United States

text: false

text: Not provided

text: American Gut Project Stool Sample

text: I do not have this condition

text: Not provided

text: Omnivore

text: true

text: false

text: I am right handed

text: Filtered

text: Not provided

text: Great Lakes

text: dense settlement biome

text: human-associated habitat

text: human-gut

text: feces

text: I do not have this condition

text: Occasionally (1-2 times/week)

text: Depends on the season

text: A mixture of breast milk and formula

text: Rarely (less than once/week)

text: Occasionally (1-2 times/week)

text: Year

text: Rarely (less than once/week)

text: Regularly (3-5 times/week)

text: I do not have this condition

text: USA:WI

text: No

text: true

text: centimeters

text: Regularly (3-5 times/week)

text: Occasionally (1-2 times/week)

text: human

text: 6b3f7141dac77ece43d56b8e3460b5ecd706304db4df0460800bd88fd704703a4b8bc742880aa4c05d4e9175aa71e8ca9eaf636830ddf9fdc97a5c35113f0f1b

text: I do not have this condition

text: Not provided

text: Not provided

text: I do not have this condition

text: I do not have this condition

text: false

text: Month

text: Graduate or Professional degree

text: I do not have this condition

text: No

text: false

text: I do not have this condition

text: Daily

text: false

text: Not provided

text: false

text: false

text: false

text: false

text: false

text: false

text: false

text: true

text: I do not have this condition

text: Regularly (3-5 times/week)

text: Rarely (less than once/week)

text: true

text: true

text: Not provided

text: false

text: true

text: false

text: false

text: false

text: false

text: Occasionally (1-2 times/week)

text: Regularly (3-5 times/week)

text: human gut metagenome

text: true

text: false

text: UCSDMI

text: true

text: I do not have this condition

text: Rarely (a few times/month)

text: Occasionally (1-2 times/week)

text: false

text: Occasionally (1-2 times/week)

text: Rarely (a few times/month)

text: true

text: Caucasian

text: Regularly (3-5 times/week)

text: Regularly (3-5 times/week)

text: No

text: Occasionally (1-2 times/week)

text: Stool

text: human gut metagenome

text: Occasionally (1-2 times/week)

text: Yes

text: male

text: I do not have this condition

text: 6-7 hours

text: Never

text: Yes

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: WI

text: True

text: True

text: False

text: True

text: False

text: True

text: Never

text: Rarely (less than once/week)

text: Regularly (3-5 times/week)

text: I do not have this condition

text: American Gut Project

text: false

text: 6 to 10

text: Regularly (3-5 times/week)

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

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text: Not provided

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text: Not provided

text: Not provided

text: Not provided

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text: Not provided

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text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

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text: Not provided

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text: Not provided

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text: Not provided

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text: Not provided

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text: Not provided

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text: Not provided

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text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Daily

text: Daily

text: Rarely (a few times/month)

text: Increased more than 10 pounds

text: kilograms

text: Occasionally (1-2 times/week)

text: Regularly (3-5 times/week)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

text: I do not have this condition

text: false

text: false

text: I do not have this condition

text: teen

text: false

text: Never

text: Not provided

text: No

text: false

text: false

text: false

text: true

text: false

text: false

text: Not provided

text: true

text: false

text: false

text: false

text: false

text: I do not have this condition

text: false

text: Rarely (a few times/month)

text: I do not have this condition

text: Not provided

characteristic: autoimmune

characteristic: birth year

characteristic: bmi

text: Normal

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: Not provided

text: false

text: I do not have this condition

characteristic: cancer

text: Not provided

characteristic: cancer treatment

text: I do not have this condition

text: false

characteristic: cat

text: I do not have this condition

characteristic: cdiff

text: West

text: No

characteristic: chickenpox

characteristic: clinical condition

characteristic: collection date

text: June

characteristic: collection month

text: Summer

text: 2016-06-19 14:15

text: No

text: No

text: Rarely (a few times/month)

text: USA

characteristic: country

text: United States

characteristic: country of birth

text: United States

text: false

text: I use deodorant

text: Not provided

text: American Gut Project Stool Sample

text: I do not have this condition

text: Not provided

text: Omnivore

text: true

text: true

text: I am left handed

text: Filtered

text: Not provided

text: Far West

text: dense settlement biome

text: human-associated habitat

text: human-gut

text: feces

text: I do not have this condition

text: Occasionally (1-2 times/week)

text: Outdoors

text: Primarily breast milk

text: Never

text: Rarely (a few times/month)

text: I have not gotten the flu vaccine in the past year.

text: Not provided

text: Daily

text: I do not have this condition

text: USA:CA

text: I was diagnosed with celiac disease

text: true

text: centimeters

text: Occasionally (1-2 times/week)

text: Regularly (3-5 times/week)

text: human

text: 3a0d3495940e561ae0d7cb29ce8be16282a425cbba22588fd3891425b013f73d9f3d6a15255a70548b48ede90e41624a080463a7ae9eb10a7545f89da5ad1d22

text: I do not have this condition

text: Not provided

text: Not provided

text: I do not have this condition

text: I do not have this condition

text: Not provided

text: Not provided

text: I do not have this condition

text: Yes

text: true

text: I do not have this condition

text: Daily

text: false

text: Not provided

text: false

text: false

text: false

text: false

text: false

text: false

text: false

text: true

text: I do not have this condition

text: Daily

text: Occasionally (1-2 times/week)

text: false

text: true

text: Not provided

text: false

text: false

text: false

text: false

text: false

text: true

text: Daily

text: Daily

text: human gut metagenome

text: false

text: false

text: UCSDMI

text: true

text: I do not have this condition

text: Occasionally (1-2 times/week)

text: Occasionally (1-2 times/week)

text: Not provided

text: Regularly (3-5 times/week)

text: Rarely (a few times/month)

text: true

text: Caucasian

text: Never

text: Occasionally (1-2 times/week)

text: No

text: Regularly (3-5 times/week)

text: Stool

text: human gut metagenome

text: Never

text: No

text: female

text: Diagnosed by an alternative medicine practitioner

text: I do not have this condition

text: 8 or more hours

text: Never

text: No

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: CA

text: False

text: True

text: True

text: True

text: False

text: True

text: Never

text: Regularly (3-5 times/week)

text: Daily

text: I do not have this condition

text: American Gut Project

text: false

text: Less than 5

text: Daily

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

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text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

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text: Not provided

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text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

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text: Not provided

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text: Not provided

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text: Not provided

text: Not provided

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text: Not provided

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text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Rarely (a few times/month)

text: Daily

text: Rarely (a few times/month)

text: Increased more than 10 pounds

text: kilograms

text: Regularly (3-5 times/week)

text: Rarely (less than once/week)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF CONNECTICUT

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:UNIVERSITY OF CONNECTICUT

characteristic: Submitter Id

text: Euprymna scolopes

characteristic: organism

text: Euprymna scolopes

text: egg jelly coat

characteristic: tissue type

text: E. scolopes egg jelly coat

characteristic: title


text: UCSDMI

text: public

text: I do not have this condition

text: false

characteristic: acne medication

text: false

text: I do not have this condition

text: child

characteristic: age cat

characteristic: age years

text: false

characteristic: alcohol consumption

text: Never

text: Not provided

text: No

text: false

text: false

text: false

text: true

text: false

text: true

characteristic: allergic to i have no food allergies that i know of

text: Not provided

text: false

text: false

text: false

text: false

text: false

text: I do not have this condition

characteristic: alzheimers

characteristic: anonymized name

text: false

text: Never

text: I do not have this condition

characteristic: asd

text: I do not have this condition

characteristic: autoimmune

characteristic: birth year

characteristic: bmi

text: Underweight

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: One

text: false

text: I do not have this condition

characteristic: cancer

text: Not provided

characteristic: cancer treatment

text: I do not have this condition

text: false

characteristic: cat

text: I do not have this condition

characteristic: cdiff

text: West

text: No

characteristic: chickenpox

text: I do not have this condition

characteristic: clinical condition

characteristic: collection date

text: June

text: Summer

characteristic: collection season

characteristic: collection time

text: 2016-06-19 18:00

text: No

text: No

characteristic: contraceptive

text: Rarely (a few times/month)

text: USA

text: United States

text: United States

text: true

text: I use deodorant

text: Not provided

text: American Gut Project Stool Sample

text: I do not have this condition

text: Not provided

text: Omnivore

text: true

text: true

text: I am right handed

text: Filtered

text: Not provided

text: Far West

text: dense settlement biome

text: human-associated habitat

text: human-gut

text: feces

text: I do not have this condition

text: Regularly (3-5 times/week)

text: Indoors

text: Primarily breast milk

text: Never

text: Daily

text: Never

text: Not provided

text: I do not have this condition

text: USA:CA

text: No

text: true

text: centimeters

text: Not provided

text: Regularly (3-5 times/week)

text: human

text: 1da7155c4e9348ddb2564405043c78e7163d4fb182f5dbc0e3101f555985c1a799552365759c85b39590a117ec813c0cb4242ef50bf1a935a76989b121afcdbd

text: I do not have this condition

text: Not provided

text: Not provided

text: I do not have this condition

text: I do not have this condition

text: false

text: Not provided

text: I do not have this condition

text: Yes

text: false

text: I do not have this condition

text: Regularly (3-5 times/week)

text: false

text: Not provided

text: false

text: false

text: false

text: false

text: false

text: false

text: false

text: true

text: I do not have this condition

text: Daily

text: Never

text: Not provided

text: false

text: Not provided

text: false

text: false

text: false

text: false

text: false

text: true

text: Regularly (3-5 times/week)

text: Never

text: human gut metagenome

text: false

text: false

text: UCSDMI

text: true

text: I do not have this condition

text: Occasionally (1-2 times/week)

text: Occasionally (1-2 times/week)

text: false

text: Regularly (3-5 times/week)

text: Rarely (a few times/month)

text: true

text: Caucasian

text: Occasionally (1-2 times/week)

text: Occasionally (1-2 times/week)

text: Yes

text: Regularly (3-5 times/week)

text: Stool

text: human gut metagenome

text: Never

text: No

text: female

text: I do not have this condition

text: 8 or more hours

text: Never

text: No

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: CA

text: False

text: True

text: False

text: True

text: False

text: True

text: Rarely (less than once/week)

text: Not provided

text: Not provided

text: I do not have this condition

text: American Gut Project

text: false

text: Less than 5

text: Regularly (3-5 times/week)

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

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text: Not provided

text: Not provided

text: Not provided

text: Not provided

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text: Not provided

text: Not provided

text: Not provided

text: Not provided

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text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

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text: Not provided

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text: Not provided

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text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Never

text: Occasionally (1-2 times/week)

text: Rarely (a few times/month)

text: Remained stable

text: kilograms

text: Never

text: Regularly (3-5 times/week)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: I do not have this condition

text: false

characteristic: acne medication

text: false

text: Self-diagnosed

characteristic: age cat

characteristic: age years

text: false

characteristic: alcohol consumption

text: Never

text: Not provided

text: No

text: false

text: false

text: true

text: false

text: false

text: false

characteristic: allergic to i have no food allergies that i know of

text: Not provided

text: true

text: false

text: false

text: false

text: false

text: I do not have this condition

characteristic: alzheimers

characteristic: anonymized name

text: 6 months

text: false

text: Never

text: I do not have this condition

characteristic: asd

text: Obese

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: Not provided

text: false

text: Surgery only

text: I do not have this condition

text: false

text: I do not have this condition

text: West

text: Yes

text: I do not have this condition

text: June

characteristic: collection month

text: Summer

text: 2016-06-19 08:00

text: No

text: No

text: Daily

text: USA

characteristic: country

text: United States

characteristic: country of birth

text: United States

text: false

text: I use deodorant

text: Not provided

text: American Gut Project Stool Sample

text: I do not have this condition

text: Not provided

text: Omnivore

text: true

text: true

text: I am right handed

text: Filtered

text: Not provided

text: Far West

text: dense settlement biome

text: human-associated habitat

text: human-gut

text: feces

text: I do not have this condition

text: Occasionally (1-2 times/week)

text: Outdoors

text: A mixture of breast milk and formula

text: Never

text: Rarely (a few times/month)

text: Never

text: Rarely (less than once/week)

text: USA:CA

text: I was diagnosed with celiac disease

text: true

text: centimeters

text: Not provided

text: Not provided

text: human

text: 37e98f5536de2a4bc80f07c0a6cec64d1d7dfab8424fa1d7fac055468d91d099378fc6410e3dfc437cac8fd4bbeacd27c3f3aeb4f98fb659c5895ea702a3b02c

text: I do not have this condition

text: Not provided

text: Not provided

text: I do not have this condition

text: I do not have this condition

text: true

text: 1 year

text: Bachelor's degree

text: I do not have this condition

text: No

text: true

text: I do not have this condition

text: Daily

text: false

text: Not provided

text: false

text: false

text: false

text: false

text: false

text: false

text: false

text: true

text: I do not have this condition

text: Rarely (less than once/week)

text: Regularly (3-5 times/week)

text: true

text: false

text: Not provided

text: false

text: false

text: true

text: false

text: true

text: false

text: Daily

text: Daily

text: human gut metagenome

text: true

text: false

text: UCSDMI

text: true

text: I do not have this condition

text: Rarely (a few times/month)

text: Regularly (3-5 times/week)

text: false

text: Regularly (3-5 times/week)

text: Regularly (3-5 times/week)

text: true

text: Caucasian

text: Never

text: Regularly (3-5 times/week)

text: Three

text: Yes

text: Rarely (less than once/week)

text: Stool

text: human gut metagenome

text: Never

text: No

text: female

text: 6-7 hours

text: Never

text: No

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: CA

text: True

text: False

text: False

text: True

text: False

text: True

text: Never

text: Never

text: Daily

text: I do not have this condition

text: American Gut Project

text: false

text: Less than 5

text: Regularly (3-5 times/week)

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

text: Not provided

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text: Not provided

text: Not provided

text: Not provided

text: Daily

text: Daily

text: Never

text: Increased more than 10 pounds

text: kilograms

text: Daily

text: Rarely (less than once/week)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

text: American Gut control

characteristic: description

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: misc environment

characteristic: env package

text: sterile water

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host subject id

text: metagenome

characteristic: organism

text: UCSDMI

text: true

characteristic: public

text: control blank

characteristic: sample type

text: metagenome

characteristic: title

text: American Gut Project


text: UCSDMI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: American Gut control

text: urban biome

text: research facility

text: misc environment

text: sterile water

text: USA:CA:San Diego

text: metagenome

text: UCSDMI

text: true

text: control blank

text: metagenome

text: American Gut Project


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF CONNECTICUT

characteristic: INSDC center name

text: public

text: Maintained in lab for 3 months

text: Euprymna scolopes

text: Euprymna scolopes

text: E. scolopes egg jelly coat

characteristic: tissue type

text: E. scolopes lab-maintained ANG


text: UNIVERSITY OF CONNECTICUT

text: public

text: Maintained in lab for 3.5 months

characteristic: description

text: Euprymna scolopes

text: Euprymna scolopes

text: E. scolopes egg jelly coat

text: E. scolopes lab-maintained ANG


text: UNIVERSITY OF CONNECTICUT

text: public

text: Euprymna scolopes

characteristic: organism

text: Euprymna scolopes

text: E. scolopes egg jelly coat

text: E. scolopes egg jelly coat, 0 day post-deposit


text: UNIVERSITY OF CONNECTICUT

text: public

text: Euprymna scolopes

text: Euprymna scolopes

text: E. scolopes egg jelly coat

text: E. scolopes egg jelly coat, 11 day post-deposit


text: UNIVERSITY OF CONNECTICUT

text: public

text: Euprymna scolopes

text: Euprymna scolopes

text: E. scolopes egg jelly coat

text: E. scolopes egg jelly coat, 9 day post-deposit


text: UNIVERSITY OF CONNECTICUT

text: public

text: Euprymna scolopes

text: Euprymna scolopes

text: E. scolopes egg jelly coat

text: E. scolopes egg jelly coat, 20 day post-deposit


text: UNIVERSITY OF CONNECTICUT

text: public

text: Euprymna scolopes

text: Euprymna scolopes

text: E. scolopes egg jelly coat

text: E. scolopes egg jelly coat, 1 day post-deposit


text: UNIVERSITY OF CONNECTICUT

text: public

text: Euprymna scolopes

text: Euprymna scolopes

text: E. scolopes egg jelly coat

text: E. scolopes egg jelly coat, 10 day post-deposit


text: UNIVERSITY OF CONNECTICUT

text: public

text: Euprymna scolopes

text: Euprymna scolopes

text: E. scolopes egg jelly coat

text: E. scolopes egg jelly coat, 21 day post-deposit


text: CNRS

text: public

text: BW25113 strain used to construct the hcha yhbO yajL derivative

text: BW25113 hchA yhbO yajL

characteristic: lab host

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: BW25113 (IJM)

type: has member


text: CNRS

text: public

text: hcha yhbO yajL derivative from BW25113

text: BW25113 hcha yhbO yajL (IJM)

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: BW25113 hchA yhbO yajL


text: UNSW

text: public

characteristic: cell line

text: Pancreatic

characteristic: cell type

text: APGI

characteristic: collected by

text: human

characteristic: common name

text: PDCL DNA from pancreatic cancer patient TKCC02

text: Homo sapiens

text: Homo sapiens


text: UNSW

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Pancreatic

text: APGI

text: human

text: Tumour DNA from pancreatic cancer patient TKCC02

text: Homo sapiens

text: Homo sapiens

characteristic: title


characteristic: ENA-CHECKLIST

text: UNSW

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Pancreatic

text: APGI

text: human

text: Normal DNA from pancreatic cancer patient TKCC02

text: Homo sapiens

text: Homo sapiens


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNSW

text: public

text: Pancreatic

text: APGI

text: human

text: PDCL DNA from pancreatic cancer patient TKCC03

text: Homo sapiens

text: Homo sapiens


text: UNSW

characteristic: INSDC center name

text: public

text: Pancreatic

text: APGI

text: human

characteristic: description

text: Homo sapiens

text: Homo sapiens


text: UNSW

text: public

text: Pancreatic

text: APGI

text: human

text: PDCL DNA from pancreatic cancer patient TKCC07

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: TKCC07_Cancer PDCL


text: UNSW

text: public

text: Pancreatic

text: APGI

text: human

text: Normal DNA from pancreatic cancer patient TKCC07

text: Homo sapiens

text: Homo sapiens


text: UNSW

text: public

characteristic: cell line

text: Pancreatic

text: APGI

text: human

text: PDCL DNA from pancreatic cancer patient TKCC09

text: Homo sapiens

text: Homo sapiens


text: UNSW

text: public

text: Pancreatic

characteristic: cell type

text: APGI

text: human

text: Tumour DNA from pancreatic cancer patient TKCC09

text: Homo sapiens

text: Homo sapiens


text: UNSW

text: public

text: Pancreatic

text: APGI

characteristic: collected by

text: human

text: Normal DNA from pancreatic cancer patient TKCC09

text: Homo sapiens

text: Homo sapiens


text: UNSW

text: public

text: Pancreatic

text: APGI

text: human

characteristic: common name

text: PDCL DNA from pancreatic cancer patient TKCC10

text: Homo sapiens

text: Homo sapiens


text: UNSW

characteristic: INSDC first public

text: public

text: Pancreatic

text: APGI

text: human

text: Tumour DNA from pancreatic cancer patient TKCC10

text: Homo sapiens

text: Homo sapiens


text: UNSW

characteristic: INSDC last update

text: public

text: Pancreatic

text: APGI

text: human

text: Normal DNA from pancreatic cancer patient TKCC10

text: Homo sapiens

text: Homo sapiens


text: UNSW

text: public

characteristic: INSDC status

text: Pancreatic

text: APGI

text: human

text: Tumour DNA from pancreatic cancer patient TKCC03

text: Homo sapiens

text: Homo sapiens


text: UNSW

text: public

text: Pancreatic

text: APGI

text: human

text: PDCL DNA from pancreatic cancer patient TKCC15LO

text: Homo sapiens

text: Homo sapiens

characteristic: title


characteristic: ENA-CHECKLIST

text: UNSW

text: public

text: Pancreatic

text: APGI

text: human

text: Normal DNA from pancreatic cancer patient TKCC15

text: Homo sapiens

text: Homo sapiens


text: UNSW

text: public

characteristic: SRA accession

text: Pancreatic

text: APGI

text: human

text: PDCL DNA from pancreatic cancer patient TKCC16LO

text: Homo sapiens

text: Homo sapiens


text: UNSW

text: public

characteristic: Submitter Id

text: Pancreatic

text: APGI

text: human

text: PDCL DNA from pancreatic cancer patient TKCC17LO

text: Homo sapiens

text: Homo sapiens


characteristic: ENA-FIRST-PUBLIC

text: UNSW

text: public

text: Pancreatic

text: APGI

text: human

text: Normal DNA from pancreatic cancer patient TKCC17LO

text: Homo sapiens

text: Homo sapiens


characteristic: ENA-LAST-UPDATE

text: UNSW

text: public

text: Pancreatic

text: APGI

text: human

text: PDCL DNA from pancreatic cancer patient TKCC18LO

text: Homo sapiens

text: Homo sapiens


characteristic: External Id

text: UNSW

text: public

text: Pancreatic

text: APGI

text: human

text: Normal DNA from pancreatic cancer patient TKCC18LO

text: Homo sapiens

text: Homo sapiens


text: UNSW

characteristic: INSDC center name

text: public

text: Pancreatic

text: APGI

text: human

text: PDCL DNA from pancreatic cancer patient TKCC19LO

text: Homo sapiens

text: Homo sapiens


text: UNSW

text: public

text: Pancreatic

text: APGI

text: human

text: Tumour DNA from pancreatic cancer patient TKCC19LO

characteristic: description

text: Homo sapiens

text: Homo sapiens


text: UNSW

text: public

text: Pancreatic

text: APGI

text: human

text: Normal DNA from pancreatic cancer patient TKCC19LO

text: Homo sapiens

characteristic: organism

text: Homo sapiens


text: UNSW

text: public

characteristic: cell line

text: Pancreatic

text: APGI

text: human

text: PDCL DNA from pancreatic cancer patient TKCC26LO

text: Homo sapiens

text: Homo sapiens


text: UNSW

text: public

text: Pancreatic

characteristic: cell type

text: APGI

text: human

text: Normal DNA from pancreatic cancer patient TKCC26LO

text: Homo sapiens

text: Homo sapiens


text: UNSW

text: public

text: Pancreatic

text: APGI

characteristic: collected by

text: human

text: PDCL DNA from pancreatic cancer patient TKCC04

text: Homo sapiens

text: Homo sapiens


text: UNSW

text: public

text: Pancreatic

text: APGI

text: human

characteristic: common name

text: Normal DNA from pancreatic cancer patient TKCC04

text: Homo sapiens

text: Homo sapiens


text: BGI

characteristic: INSDC first public

text: public

characteristic: collection date

text: biome

characteristic: environment (biome)

text: feature

characteristic: environment (feature)

text: material

characteristic: environment (material)

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: gut metagenome

characteristic: project name

text: gut metagenome

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Chryseobacterium sp. JV274

characteristic: organism

text: Chryseobacterium sp. JV274

characteristic: title


text: SC

characteristic: INSDC first public

text: public

text: Salmonella enterica

text: Salmonella enterica


text: UNIVERSITY OF BRISTOL

text: public

tag: Namespace:UNIVERSITY OF BRISTOL

text: Coprinopsis strossmayeri

text: Coprinopsis strossmayeri

text: Coprinopsis strossmayeri


text: public

tag: Namespace:Centre for Genomic Epidemiology, National Food Institute, Technical University of Denmark (DTU), Denmark

text: DTU-GE

characteristic: broker name

text: DTU

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Poland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Pig

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Salmonella Choleraesuis var. Kunzendorf

characteristic: isolate

text: Salmonella enterica subsp. enterica serovar Choleraesuis

text: Choleraesuis


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Centre for Genomic Epidemiology, National Food Institute, Technical University of Denmark (DTU), Denmark

characteristic: INSDC center name

characteristic: INSDC last update

text: public

text: DTU-GE

text: DTU

text: No

text: Germany

text: Wild Boar

text: Yes

text: Salmonella Choleraesuis var. Kunzendorf

text: Choleraesuis


characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: DTU-GE

text: DTU

text: No

text: Poland

text: Pig

text: Yes

text: Salmonella Choleraesuis var. Kunzendorf

characteristic: organism

text: Choleraesuis

characteristic: title


text: public

text: DTU-GE

characteristic: broker name

text: DTU

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Pig

text: Yes

text: Salmonella Choleraesuis var. Kunzendorf

text: Choleraesuis


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: DTU-GE

text: DTU

text: No

text: France

characteristic: geographic location (longitude)

text: Food

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Salmonella Choleraesuis var. Kunzendorf

characteristic: isolate

text: Choleraesuis


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DTU-GE

text: DTU

text: No

text: Czech Republic

text: pig

text: Yes

text: Salmonella Choleraesuis var. Kunzendorf

text: Choleraesuis


text: public

characteristic: SRA accession

characteristic: Submitter Id

text: DTU-GE

characteristic: broker name

text: DTU

characteristic: collected by

text: No

text: Czech Republic

text: swabs pork

text: Yes

text: Salmonella Choleraesuis var. Kunzendorf

characteristic: organism

text: Choleraesuis

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: DTU-GE

text: DTU

characteristic: collection date

text: No

characteristic: environmental sample

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Pig

text: Yes

text: Salmonella Choleraesuis var. Kunzendorf

text: Choleraesuis


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: DTU-GE

text: DTU

text: No

text: Lithuania

characteristic: geographic location (longitude)

text: Pig

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Salmonella Choleraesuis var. Kunzendorf

characteristic: isolate

text: Choleraesuis


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Pig

text: Yes

text: Salmonella Choleraesuis var. Kunzendorf

text: Choleraesuis


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: DTU-GE

characteristic: broker name

text: DTU

characteristic: collected by

text: No

text: USA

text: Pig

text: Yes

text: Salmonella Choleraesuis var. Kunzendorf

characteristic: organism

text: Choleraesuis

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: DTU-GE

text: DTU

characteristic: collection date

text: No

characteristic: environmental sample

text: Hungary

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Pig

text: Yes

text: Salmonella Choleraesuis var. Kunzendorf

text: Choleraesuis


characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DTU-GE

text: DTU

text: No

text: France

characteristic: geographic location (longitude)

text: Pig

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Salmonella Choleraesuis var. Kunzendorf

characteristic: isolate

text: Choleraesuis


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 9924281-1_Blindtarmsindhold_DK_18_11_1999

characteristic: Submitter Id

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Pig

text: Yes

text: Salmonella Choleraesuis var. Kunzendorf

text: Choleraesuis


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: 9924284-1_Blindtarmsindhold_DK_18_11_1999

text: DTU-GE

characteristic: broker name

text: DTU

characteristic: collected by

text: No

text: Denmark

text: Pig

text: Yes

text: Salmonella Choleraesuis var. Kunzendorf

characteristic: organism

text: Choleraesuis

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DTU-GE

text: DTU

characteristic: collection date

text: No

characteristic: environmental sample

text: Austria

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Wild boar

text: Yes

text: Salmonella Choleraesuis var. Kunzendorf

text: Choleraesuis


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: DTU-GE

text: DTU

text: No

text: Italy

characteristic: geographic location (longitude)

text: Pig

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Salmonella Choleraesuis var. Kunzendorf

characteristic: isolate

text: Choleraesuis


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: DTU-GE

text: DTU

text: No

text: Estonia

text: wild boar

text: Yes

text: Salmonella Choleraesuis var. Kunzendorf

text: Choleraesuis


characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DTU-GE

characteristic: broker name

text: DTU

characteristic: collected by

text: No

text: Estonia

text: pig

text: Yes

text: Salmonella Choleraesuis var. Kunzendorf

characteristic: organism

text: Choleraesuis

characteristic: title


text: Homo sapiens

characteristic: ArrayExpress-Species

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: human

characteristic: common name

text: Homo sapiens

text: Preterm faecal microbiota

characteristic: sample description

text: Homo sapiens


characteristic: ENA-LAST-UPDATE

text: Griffith University

text: public

tag: Namespace:Griffith University

text: Joseph Adelskov

text: Cellulosilyticum sp. strain I15G10I2 isolated from a coal seam gas produced water treatment pond at the Spring Gully water treatment facility north of Roma, Queensland, Australia.

characteristic: description

text: Australia

characteristic: geographic location (country and/or sea)

text: Spring Gully water treatment facility, Roma, Queensland

characteristic: geographic location (region and locality)

text: Joseph Adelskov

characteristic: identified by

characteristic: isolate

text: Coal seam gas water treatment pond

characteristic: isolation source

text: 25.999488 S 149.0704 E

characteristic: lat lon

characteristic: optimal ph

text: 37 degrees Celsius

characteristic: optimal temperature

text: Cellulosilyticum sp. I15G10I2

text: obligate anaerobe

characteristic: respiration

text: Cellulosilyticum sp. I15G10I2

text: Cellulosilyticum sp. I15G10I2


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: DTU-GE

characteristic: broker name

text: DTU

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Estonia

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: broiler

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: E.coli

text: caecum

characteristic: isolation source host associated

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: Ecoli

characteristic: title


text: Candida auris

characteristic: ArrayExpress-Species

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: Candida auris

characteristic: common name

text: [Candida] auris

text: [Candida] auris


text: University Hospital Galway

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:University Hospital Galway

characteristic: Submitter Id

text: Ireland

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: isolate

text: Faeces

characteristic: isolation source

text: Shigella sonnei

text: Shigella sonnei

text: Shigella sonnei

characteristic: serovar


text: University Hospital Galway

text: public

characteristic: collection date

text: Ireland

text: Homo sapiens

characteristic: host scientific name

text: Faeces

text: Shigella flexneri 1a

characteristic: organism

text: Shigella flexneri 1a

text: Shigella flexneri 1a

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University Hospital Galway

text: public

text: Ireland

text: Homo sapiens

text: Faeces

text: Shigella flexneri 2a

text: Shigella flexneri 2a

text: Shigella flexneri 2a


characteristic: External Id

text: QUEEN MARY UNIVERSITY OF LONDON

characteristic: INSDC center name

text: public

tag: Namespace:QUEEN MARY UNIVERSITY OF LONDON

text: Ephedra altissima

text: Ephedra altissima

text: whole genome skimming reads file 2


text: QUEEN MARY UNIVERSITY OF LONDON

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Gnetum montanum

text: Gnetum montanum

text: whole genome skimming reads


text: QUEEN MARY UNIVERSITY OF LONDON

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Welwitschia mirabilis

text: Welwitschia mirabilis

text: whole genome skimming reads file 2


text: public

tag: Namespace:Center for Cancer Biology, VIB, Leuven, Belgium Department of Oncology, KULeuven

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: HUVEC cell line

characteristic: cell line

text: HUVEC cell

characteristic: cell type

text: human

characteristic: common name

text: Protocols: Ctrl and PHGDHKD human ECs were grown in 10cm dishes and 4 days after transduction, RNA was collected to perform RNAsequencing RNA libraries were created using the KAPA mRNA stranded library prep kit according to the manufacturer’s instructions.

characteristic: description

text: Control

characteristic: genetic modification

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens


characteristic: ENA-CHECKLIST

text: Center for Cancer Biology, VIB, Leuven, Belgium Department of Oncology, KULeuven

text: public

text: ArrayExpress

text: HUVEC cell line

text: HUVEC cell

text: human

text: PHGDH Knock Down

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Homo sapiens

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: ArrayExpress

text: HUVEC cell line

text: HUVEC cell

text: human

text: Control

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens


E-MTAB-5316:HL-60 CD40L + DMSO1

text: University of Lubeck

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-5316:HL-60 CD40L + DMSO1

tag: Namespace:University of Lubeck

text: ArrayExpress

text: neutrophil progenitor cell

text: human

text: Protocols: Neutrophils from three patients with CD40L deficiency and three healthy controls were obtained from heparinized blood by dextran sedimentation followed by Ficoll-Hypaque centrifugation. After isolation, neutrophils were resuspended in RPMI 1640 medium, counted and cell viability was determined by Trypan blue exclusion and Annexin V-FITC staining. For the experiments with HL-60 cells, The HL-60 cell line was obtained from ATCC (HL-60 ATCC® CCL-240™) Neutrophils from three patients with CD40L deficiency and three healthy controls were obtained by dextran isolation method and cultured in RPMI 1640 medium in the presence or absence of (100U/mL) IFN-gamma for 2 hours. For the experiments with HL-60 cells, HL-60 cell line was cultured in RPMI + 20% FBS for 6 days in the presence or absence of 500 ng/mL sCD40L and/or 1,0 % dimethyl sulfoxide (DMSO) cDNA libraries were obtained using the Illumina CBot station, and HiScanSQ using the Illumina TruSeq RNA Sample Preparation Kit (Illumina Inc., San Diego, USA,) according to each manufacturer´s instructions.

text: acute promyelocytic leukemia

characteristic: disease

text: somatic genotype

characteristic: genotype

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: HL-60 CD40L + DMSO1


E-MTAB-5316:HL-60 CD40L + DMSO2

text: University of Lubeck

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5316:HL-60 CD40L + DMSO2

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: neutrophil progenitor cell

text: human

text: acute promyelocytic leukemia

text: somatic genotype

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: HL-60 CD40L + DMSO2


E-MTAB-5316:HL-60 CD40L + DMSO3

text: University of Lubeck

text: public

text: E-MTAB-5316:HL-60 CD40L + DMSO3

text: ArrayExpress

text: neutrophil progenitor cell

characteristic: cell type

text: human

characteristic: common name

characteristic: description

text: acute promyelocytic leukemia

text: somatic genotype

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: HL-60 CD40L + DMSO3


E-MTAB-5316:HL-60 CD40L1

characteristic: ENA-CHECKLIST

text: University of Lubeck

text: public

text: E-MTAB-5316:HL-60 CD40L1

text: ArrayExpress

text: neutrophil progenitor cell

text: human

text: acute promyelocytic leukemia

text: somatic genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Homo sapiens

text: HL-60 CD40L1

characteristic: title


E-MTAB-5316:HL-60 CD40L2

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Lubeck

text: public

text: E-MTAB-5316:HL-60 CD40L2

text: ArrayExpress

text: neutrophil progenitor cell

text: human

text: acute promyelocytic leukemia

text: somatic genotype

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: HL-60 CD40L2


E-MTAB-5316:HL-60 CD40L3

text: University of Lubeck

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-5316:HL-60 CD40L3

text: ArrayExpress

text: neutrophil progenitor cell

text: human

text: acute promyelocytic leukemia

text: somatic genotype

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: HL-60 CD40L3


E-MTAB-5316:HL-60 DMSO1

text: University of Lubeck

text: public

characteristic: INSDC status

text: E-MTAB-5316:HL-60 DMSO1

text: ArrayExpress

text: neutrophil progenitor cell

text: human

text: acute promyelocytic leukemia

characteristic: disease

text: somatic genotype

characteristic: genotype

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: HL-60 DMSO1


E-MTAB-5316:HL-60 DMSO2

text: University of Lubeck

text: public

characteristic: SRA accession

text: E-MTAB-5316:HL-60 DMSO2

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: neutrophil progenitor cell

text: human

text: acute promyelocytic leukemia

text: somatic genotype

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: HL-60 DMSO2


E-MTAB-5316:HL-60 DMSO3

text: University of Lubeck

text: public

text: E-MTAB-5316:HL-60 DMSO3

text: ArrayExpress

characteristic: cell line

text: neutrophil progenitor cell

characteristic: cell type

text: human

characteristic: common name

text: acute promyelocytic leukemia

text: somatic genotype

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: HL-60 DMSO3


E-MTAB-5316:HL-60 untreated1

characteristic: ENA-CHECKLIST

text: University of Lubeck

text: public

text: E-MTAB-5316:HL-60 untreated1

text: ArrayExpress

text: neutrophil progenitor cell

text: human

characteristic: description

text: acute promyelocytic leukemia

text: somatic genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Homo sapiens

text: HL-60 untreated1


E-MTAB-5316:HL-60 untreated2

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Lubeck

text: public

text: E-MTAB-5316:HL-60 untreated2

text: ArrayExpress

text: neutrophil progenitor cell

text: human

text: acute promyelocytic leukemia

text: somatic genotype

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: HL-60 untreated2

characteristic: title