E-MTAB-5806:Sample 1

text: public

text: E-MTAB-5806:Sample 1

text: 8 to 12

text: ArrayExpress

characteristic: broker name

text: group 2 innate lymphoid cell

characteristic: cell type

text: house mouse

characteristic: common name

text: Protocols: Single cell suspensions from pooled mesenteric, para-aortic and inguinal lymph nodes, and the lung were stained with CD127 (A7R34), ICOS (C398.4A), ST2 (RMST2-33), NK1.1 (PK136), CD3 (17A2), CD19 (6D5), GR-1 (RB6-8C5), TER-119 (TER-119), CD11c (HL3), CD8a (53-6.7), CD90.2 (53-2.1), CD45 (30-F11), CD11b (M1/70). All antibodies were purchased from Biolegend or BD bioscience. Viable cells were discriminated by using fixable viability dye ef450 from BD bioscience After sorting, uILC2 pellet were collected into fresh TRI Reagent (Sigma). RNA extraction was carried out by following TRI Reagent manufacture instructions. Transparent part containing mRNA was then purified with RNAeasy mini kit (Quiagen), gDNA contamination was eliminated with Turbo DNAse (Ambion) and we then clean up ILC2 mRNA with RNAeasy micro kit (Quiagen). C57BL/6 (B6) WT mice were used at 8-12 weeks. Single cell suspensions from Virgin and pregnant uteri were stained with CD127 (A7R34), ICOS (C398.4A), ST2 (RMST2-33), NK1.1 (PK136), CD3 (17A2), CD19 (6D5), GR-1 (RB6-8C5), TER-119 (TER-119), CD11c (HL3), CD8a (53-6.7), CD90.2 (53-2.1), CD45 (30-F11), CD11b (M1/70). Viable cells were discriminated by using fixable viability dye ef450 from BD bioscience. Live, single cells, CD45+ve CD11b-ve NK1.1-ve, CD3-ve, CD19-ve, GR-1-ve, Ter119-ve, CD11c-ve, CD8a-ve, ST2+ve, CD90+ve were sorted with BD FACSAria III into PBS 2% FCS. After sorting, uILC2 pellet were collected into fresh TRI Reagent (Sigma). RNA extraction was carried out by following TRI Reagent manufacture instructions. Transparent part containing mRNA was then purified with RNAeasy mini kit (Quiagen), gDNA contamination was eliminated with Turbo DNAse (Ambion) and we then clean up ILC2 mRNA with RNAeasy micro kit (Quiagen).

characteristic: description

text: wild type genotype

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: lymph node

text: Mus musculus

text: Sample 1


E-MTAB-5806:Sample 2

status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5806:Sample 2

tag: Namespace:Centre for Trophoblast Research, University of Cambridge

characteristic: Submitter Id

text: 8 to 12

unit: week

characteristic: age

text: ArrayExpress

text: group 2 innate lymphoid cell

text: house mouse

text: wild type genotype

text: Mus musculus

characteristic: organism

text: Mus musculus

text: lung

characteristic: organism part

text: Mus musculus

characteristic: strain

text: Sample 2

characteristic: title


E-MTAB-5806:Sample 3

text: Centre for Trophoblast Research, University of Cambridge

text: public

text: E-MTAB-5806:Sample 3

text: 8 to 12

text: ArrayExpress

characteristic: broker name

text: group 2 innate lymphoid cell

characteristic: cell type

text: house mouse

characteristic: common name

characteristic: description

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: lymph node

text: Mus musculus

text: Sample 3


E-MTAB-5806:Sample 4

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-5806:Sample 4

text: 8 to 12

text: ArrayExpress

text: group 2 innate lymphoid cell

text: house mouse

text: wild type genotype

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: lung

text: Mus musculus

text: Sample 4


E-MTAB-5806:Sample 5

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-5806:Sample 5

text: 8 to 12

text: ArrayExpress

text: group 2 innate lymphoid cell

text: house mouse

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: lymph node

text: Mus musculus

text: Sample 5


E-MTAB-5806:Sample 6

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5806:Sample 6

characteristic: Submitter Id

text: 8 to 12

characteristic: age

text: ArrayExpress

text: group 2 innate lymphoid cell

text: house mouse

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: lung

text: Mus musculus

text: Sample 6


text: CENTER FOR AGRICULTURAL BIOTECHNOLOGY

text: public

tag: Namespace:CENTER FOR AGRICULTURAL BIOTECHNOLOGY

text: 10 years

text: African oil palm

text: Univanich Tenera

characteristic: cultivar

text: Tenera

text: Elaeis guineensis

characteristic: organism

text: emerging leaf L0-L1

characteristic: organism part

characteristic: ploidy

text: Elaeis guineensis

text: African oil palm Tenera Eg03

characteristic: title


characteristic: ENA-CHECKLIST

text: CENTER FOR AGRICULTURAL BIOTECHNOLOGY

text: public

text: 10 years

text: African oil palm

characteristic: common name

text: Univanich Tenera

text: Tenera

text: Elaeis guineensis

text: emerging leaf L0-L1

text: Elaeis guineensis

text: African oil palm Tenera Eg04


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CENTER FOR AGRICULTURAL BIOTECHNOLOGY

text: public

text: 10 years

text: African oil palm

text: Univanich Tenera

text: Tenera

text: Elaeis guineensis

text: emerging leaf L0-L1

text: Elaeis guineensis

text: African oil palm Tenera Eg05


characteristic: External Id

text: CENTER FOR AGRICULTURAL BIOTECHNOLOGY

text: public

text: 10 years

text: African oil palm

text: Univanich Tenera

text: Tenera

characteristic: genotype

text: Elaeis guineensis

text: emerging leaf L0-L1

text: Elaeis guineensis

text: African oil palm Tenera Eg06


text: CENTER FOR AGRICULTURAL BIOTECHNOLOGY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: 10 years

text: African oil palm

text: Univanich Tenera

text: Tenera

text: Elaeis guineensis

text: emerging leaf L0-L1

text: Elaeis guineensis

text: African oil palm Tenera Eg07


text: CENTER FOR AGRICULTURAL BIOTECHNOLOGY

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: 10 years

text: African oil palm

text: Univanich Tenera

text: Tenera

text: Elaeis guineensis

text: emerging leaf L0-L1

text: Elaeis guineensis

text: African oil palm Tenera Eg08


text: CENTER FOR AGRICULTURAL BIOTECHNOLOGY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: 10 years

text: African oil palm

text: Univanich Tenera

text: Tenera

text: Elaeis guineensis

text: emerging leaf L0-L1

text: Elaeis guineensis

text: African oil palm Tenera Eg09


text: CENTER FOR AGRICULTURAL BIOTECHNOLOGY

text: public

text: 10 years

characteristic: age

text: African oil palm

text: Univanich Tenera

characteristic: cultivar

text: Tenera

text: Elaeis guineensis

text: emerging leaf L0-L1

text: Elaeis guineensis

text: African oil palm Tenera Eg10


text: CENTER FOR AGRICULTURAL BIOTECHNOLOGY

text: public

text: 10 years

text: African oil palm

text: Univanich Tenera

text: Tenera

text: Elaeis guineensis

characteristic: organism

text: emerging leaf L0-L1

characteristic: organism part

text: Elaeis guineensis

text: African oil palm Tenera Eg11


text: CENTER FOR AGRICULTURAL BIOTECHNOLOGY

text: public

text: 10 years

text: African oil palm

text: Univanich Tenera

text: Tenera

text: Elaeis guineensis

text: emerging leaf L0-L1

characteristic: ploidy

text: Elaeis guineensis

text: African oil palm Tenera Eg12

characteristic: title


characteristic: ENA-CHECKLIST

text: CENTER FOR AGRICULTURAL BIOTECHNOLOGY

text: public

text: 10 years

text: African oil palm

characteristic: common name

text: Univanich Tenera

text: Tenera

text: Elaeis guineensis

text: emerging leaf L0-L1

text: Elaeis guineensis

text: African oil palm Tenera Eg13


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CENTER FOR AGRICULTURAL BIOTECHNOLOGY

text: public

text: 10 years

text: African oil palm

text: Univanich Tenera

text: Tenera

text: Elaeis guineensis

text: emerging leaf L0-L1

text: Elaeis guineensis

text: African oil palm Tenera Eg14


characteristic: External Id

text: CENTER FOR AGRICULTURAL BIOTECHNOLOGY

text: public

text: 10 years

text: African oil palm

text: Univanich Tenera

text: Tenera

characteristic: genotype

text: Elaeis guineensis

text: emerging leaf L0-L1

text: Elaeis guineensis

text: African oil palm Tenera Eg15


text: CENTER FOR AGRICULTURAL BIOTECHNOLOGY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: 10 years

text: African oil palm

text: Univanich Tenera

text: Tenera

text: Elaeis guineensis

text: emerging leaf L0-L1

text: Elaeis guineensis

text: African oil palm Tenera Eg16


text: CENTER FOR AGRICULTURAL BIOTECHNOLOGY

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: 10 years

text: African oil palm

text: Univanich Tenera

text: Tenera

text: Elaeis guineensis

text: emerging leaf L0-L1

text: Elaeis guineensis

text: African oil palm Tenera Eg17


text: CENTER FOR AGRICULTURAL BIOTECHNOLOGY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: 10 years

text: African oil palm

text: Univanich Tenera

text: Tenera

text: Elaeis guineensis

text: emerging leaf L0-L1

text: Elaeis guineensis

text: African oil palm Tenera Eg18


text: CENTER FOR AGRICULTURAL BIOTECHNOLOGY

text: public

text: 10 years

characteristic: age

text: African oil palm

text: Univanich Tenera

characteristic: cultivar

text: Tenera

text: Elaeis guineensis

text: emerging leaf L0-L1

text: Elaeis guineensis

text: African oil palm Tenera Eg23


text: CENTER FOR AGRICULTURAL BIOTECHNOLOGY

text: public

text: 10 years

text: African oil palm

text: Univanich Tenera

text: Tenera

text: Elaeis guineensis

characteristic: organism

text: emerging leaf L0-L1

characteristic: organism part

text: Elaeis guineensis

text: African oil palm Tenera Eg24


text: CENTER FOR AGRICULTURAL BIOTECHNOLOGY

text: public

text: 10 years

text: African oil palm

text: Univanich Tenera

text: Tenera

text: Elaeis guineensis

text: emerging leaf L0-L1

characteristic: ploidy

text: Elaeis guineensis

text: African oil palm Tenera Eg25

characteristic: title


characteristic: ENA-CHECKLIST

text: CENTER FOR AGRICULTURAL BIOTECHNOLOGY

text: public

text: 10 years

text: African oil palm

characteristic: common name

text: Univanich Tenera

text: Tenera

text: Elaeis guineensis

text: emerging leaf L0-L1

text: Elaeis guineensis

text: African oil palm Tenera Eg26


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CENTER FOR AGRICULTURAL BIOTECHNOLOGY

text: public

text: 10 years

text: African oil palm

text: Univanich Tenera

text: Tenera

text: Elaeis guineensis

text: emerging leaf L0-L1

text: Elaeis guineensis

text: African oil palm Tenera Eg27


characteristic: External Id

text: CENTER FOR AGRICULTURAL BIOTECHNOLOGY

text: public

text: 10 years

text: African oil palm

text: Univanich Tenera

text: Tenera

characteristic: genotype

text: Elaeis guineensis

text: emerging leaf L0-L1

text: Elaeis guineensis

text: African oil palm Tenera Eg28


text: CENTER FOR AGRICULTURAL BIOTECHNOLOGY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: 10 years

text: African oil palm

text: Univanich Tenera

text: Tenera

text: Elaeis guineensis

text: emerging leaf L0-L1

text: Elaeis guineensis

text: African oil palm Tenera Eg29


text: CENTER FOR AGRICULTURAL BIOTECHNOLOGY

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: 10 years

text: African oil palm

text: Univanich Tenera

text: Tenera

text: Elaeis guineensis

text: emerging leaf L0-L1

text: Elaeis guineensis

text: African oil palm Tenera Eg30


text: NATIONAL CENTRE FOR BIOLOGICAL SCIENCES

text: public

characteristic: SRA accession

tag: Namespace:NATIONAL CENTRE FOR BIOLOGICAL SCIENCES

characteristic: Submitter Id

characteristic: collection date

text: EnvO

characteristic: environment (biome)

text: EnvO

characteristic: environment (feature)

text: EnvO

characteristic: environment (material)

text: India

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: insect gut metagenome

text: Bacterial communities associated with butterflies

characteristic: project name

text: insect gut metagenome

text: Illumina

characteristic: sequencing method

text: Pieris brassicae (Large Cabbage White butterfly)Pupa1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NATIONAL CENTRE FOR BIOLOGICAL SCIENCES

characteristic: INSDC center name

text: public

text: EnvO

text: EnvO

text: EnvO

text: India

text: host-associated

text: metagenome

text: insect gut metagenome

characteristic: organism

text: insect gut metagenome

text: Illumina

text: Pieris brassicae (Large Cabbage White butterfly)Pupa2

characteristic: title


text: NATIONAL CENTRE FOR BIOLOGICAL SCIENCES

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: EnvO

characteristic: environment (biome)

text: EnvO

text: EnvO

text: India

text: host-associated

text: metagenome

text: insect gut metagenome

text: insect gut metagenome

text: Illumina

text: Pieris brassicae (Large Cabbage White butterfly)Pupa3


text: NATIONAL CENTRE FOR BIOLOGICAL SCIENCES

text: public

text: EnvO

text: EnvO

characteristic: environment (feature)

text: EnvO

characteristic: environment (material)

text: India

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: insect gut metagenome

text: insect gut metagenome

text: Illumina

text: Pieris brassicae (Large Cabbage White butterfly)Pupa4


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NATIONAL CENTRE FOR BIOLOGICAL SCIENCES

characteristic: INSDC center name

text: public

text: EnvO

text: EnvO

text: EnvO

text: India

text: host-associated

text: metagenome

text: insect gut metagenome

characteristic: project name

text: insect gut metagenome

text: Illumina

characteristic: sequencing method

text: Pieris brassicae (Large Cabbage White butterfly)Pupa5


text: NATIONAL CENTRE FOR BIOLOGICAL SCIENCES

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Adult 1

characteristic: description

text: EnvO

text: EnvO

text: EnvO

text: India

text: host-associated

text: metagenome

text: insect gut metagenome

characteristic: organism

text: insect gut metagenome

text: Illumina

text: Pieris brassicae (Adult1)

characteristic: title


text: NATIONAL CENTRE FOR BIOLOGICAL SCIENCES

text: public

characteristic: collection date

text: Adult 2

text: EnvO

characteristic: environment (biome)

text: EnvO

characteristic: environment (feature)

text: EnvO

characteristic: environment (material)

text: India

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

text: insect gut metagenome

text: insect gut metagenome

text: Illumina

text: Pieris brassicae (Adult 2)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NATIONAL CENTRE FOR BIOLOGICAL SCIENCES

characteristic: INSDC center name

text: public

text: Adult 3

text: EnvO

text: EnvO

text: EnvO

text: India

text: host-associated

text: metagenome

characteristic: investigation type

text: insect gut metagenome

characteristic: project name

text: insect gut metagenome

text: Illumina

characteristic: sequencing method

text: Pieris brassicae (Adult 3)


text: NATIONAL CENTRE FOR BIOLOGICAL SCIENCES

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Adult 4

characteristic: description

text: EnvO

text: EnvO

text: EnvO

text: India

text: host-associated

text: metagenome

text: insect gut metagenome

characteristic: organism

text: insect gut metagenome

text: Illumina

text: Pieris brassicae (Adult 4)

characteristic: title


text: NATIONAL CENTRE FOR BIOLOGICAL SCIENCES

text: public

characteristic: collection date

text: Adult 5

text: EnvO

characteristic: environment (biome)

text: EnvO

characteristic: environment (feature)

text: EnvO

characteristic: environment (material)

text: India

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

text: insect gut metagenome

text: insect gut metagenome

text: Illumina

text: Pieris brassicae (Adult 5)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NATIONAL CENTRE FOR BIOLOGICAL SCIENCES

characteristic: INSDC center name

text: public

text: Larva 1

text: EnvO

text: EnvO

text: EnvO

text: India

text: host-associated

text: metagenome

characteristic: investigation type

text: insect gut metagenome

characteristic: project name

text: insect gut metagenome

text: Illumina

characteristic: sequencing method

text: Pieris brassicae (larva1)


text: NATIONAL CENTRE FOR BIOLOGICAL SCIENCES

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Larva 2

characteristic: description

text: EnvO

text: EnvO

text: EnvO

text: India

text: host-associated

text: metagenome

text: insect gut metagenome

characteristic: organism

text: insect gut metagenome

text: Illumina

text: Pieris brassicae (larva2)

characteristic: title


text: NATIONAL CENTRE FOR BIOLOGICAL SCIENCES

text: public

characteristic: collection date

text: Larva 3

text: EnvO

characteristic: environment (biome)

text: EnvO

characteristic: environment (feature)

text: EnvO

characteristic: environment (material)

text: India

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

text: insect gut metagenome

text: insect gut metagenome

text: Illumina

text: Pieris brassicae (larva3)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NATIONAL CENTRE FOR BIOLOGICAL SCIENCES

characteristic: INSDC center name

text: public

text: Larva 4

text: EnvO

text: EnvO

text: EnvO

text: India

text: host-associated

text: metagenome

characteristic: investigation type

text: insect gut metagenome

characteristic: project name

text: insect gut metagenome

text: Illumina

characteristic: sequencing method

text: Pieris brassicae (larva4)


text: NATIONAL CENTRE FOR BIOLOGICAL SCIENCES

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Larva 5

characteristic: description

text: EnvO

text: EnvO

text: EnvO

text: India

text: host-associated

text: metagenome

text: insect gut metagenome

characteristic: organism

text: insect gut metagenome

text: Illumina

text: Pieris brassicae (larva5)

characteristic: title


text: public

tag: Namespace:Consiglio per la ricerca in agricoltura e l'analisi dell'economia agraria

characteristic: collection date

text: tomato

characteristic: common name

text: Italy

characteristic: geographic location (country and/or sea)

text: 40°36'4284 N

characteristic: geographic location (latitude)

text: 14°59'960 E

characteristic: geographic location (longitude)

text: growth chamber

characteristic: growth facility

text: Solanum lycopersicum (cv. Corbarino) plants were grown in a climatic chamber for three weeks with a photoperiod of 16h/8h (light/dark), under a temperature of 25 °C/21 °C (day/night), with 80% of relative humidity.

characteristic: isolation and growth condition

text: Solanum lycopersicum

text: tomato

characteristic: organism common name

text: after 14 days from transplanting

characteristic: plant developmental stage

text: hydroponic

characteristic: plant growth medium

text: root

characteristic: plant structure

text: Solanum lycopersicum

text: RNA-seq analysis of tomato roots interacting with the plant growth-promoting fungus Trichoderma harzianum strain T22 at 24h replicate 1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Consiglio per la ricerca in agricoltura e l'analisi dell'economia agraria

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: tomato

text: Italy

text: 40°36'4284 N

text: 14°59'960 E

text: growth chamber

text: Solanum lycopersicum

text: tomato

text: after 14 days from transplanting

text: hydroponic

text: root

text: Solanum lycopersicum

text: RNA-seq analysis of tomato roots interacting with the plant growth-promoting fungus Trichoderma harzianum strain T22 at 24h replicate 2


text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: tomato

characteristic: common name

text: Italy

characteristic: geographic location (country and/or sea)

text: 40°36'4284 N

text: 14°59'960 E

text: growth chamber

text: Solanum lycopersicum

characteristic: organism

text: tomato

text: after 14 days from transplanting

text: hydroponic

text: root

text: Solanum lycopersicum

text: RNA-seq analysis of tomato roots interacting with the plant growth-promoting fungus Trichoderma harzianum strain T22 at 24h replicate 3

characteristic: title


text: public

text: tomato

text: Italy

text: 40°36'4284 N

characteristic: geographic location (latitude)

text: 14°59'960 E

characteristic: geographic location (longitude)

text: growth chamber

characteristic: growth facility

characteristic: isolation and growth condition

text: Solanum lycopersicum

text: tomato

characteristic: organism common name

text: after 14 days from transplanting

characteristic: plant developmental stage

text: hydroponic

characteristic: plant growth medium

text: root

text: Solanum lycopersicum

text: RNA-seq analysis of tomato roots interacting with the plant growth-promoting fungus Trichoderma harzianum strain T22 at 48h replicate 1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: tomato

text: Italy

text: 40°36'4284 N

text: 14°59'960 E

text: growth chamber

text: Solanum lycopersicum

text: tomato

text: after 14 days from transplanting

text: hydroponic

text: root

characteristic: plant structure

text: Solanum lycopersicum

text: RNA-seq analysis of tomato roots interacting with the plant growth-promoting fungus Trichoderma harzianum strain T22 at 48h replicate 2


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: tomato

characteristic: common name

text: Italy

characteristic: geographic location (country and/or sea)

text: 40°36'4284 N

text: 14°59'960 E

text: growth chamber

text: Solanum lycopersicum

text: tomato

text: after 14 days from transplanting

text: hydroponic

text: root

text: Solanum lycopersicum

text: RNA-seq analysis of tomato roots interacting with the plant growth-promoting fungus Trichoderma harzianum strain T22 at 48h replicate 3


text: public

text: tomato

text: Italy

text: 40°36'4284 N

characteristic: geographic location (latitude)

text: 14°59'960 E

characteristic: geographic location (longitude)

text: growth chamber

characteristic: growth facility

characteristic: isolation and growth condition

text: Solanum lycopersicum

characteristic: organism

text: tomato

characteristic: organism common name

text: after 14 days from transplanting

text: hydroponic

text: root

text: Solanum lycopersicum

text: RNA-seq analysis of tomato roots interacting with the plant growth-promoting fungus Trichoderma harzianum strain T22 at 72h replicate 1

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: tomato

text: Italy

text: 40°36'4284 N

text: 14°59'960 E

text: growth chamber

text: Solanum lycopersicum

text: tomato

text: after 14 days from transplanting

characteristic: plant developmental stage

text: hydroponic

characteristic: plant growth medium

text: root

text: Solanum lycopersicum

text: RNA-seq analysis of tomato roots interacting with the plant growth-promoting fungus Trichoderma harzianum strain T22at 72h replicate 2


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: tomato

text: Italy

text: 40°36'4284 N

text: 14°59'960 E

text: growth chamber

text: Solanum lycopersicum

text: tomato

text: after 14 days from transplanting

text: hydroponic

text: root

characteristic: plant structure

text: Solanum lycopersicum

text: RNA-seq analysis of tomato roots interacting with the plant growth-promoting fungus Trichoderma harzianum strain T22 at 72h replicate 3


text: Plasmodium falciparum

characteristic: ArrayExpress-SPECIES

text: SC

text: public

text: malaria parasite P. falciparum

characteristic: common name

text: Plasmodium falciparum

characteristic: organism

text: Plasmodium falciparum

characteristic: subject id


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: URMITE

text: public

text: Cowpox virus

text: Cowpox virus

text: France Amiens 2016

characteristic: strain

text: Cowpox virus France Amiens 2016 genome

characteristic: title


text: metagenome

characteristic: ArrayExpress-Species

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: metagenome

text: metagenome

text: Metagenomic

characteristic: sample description

text: metagenome


text: Salmonella enterica

text: Salmonella spp.

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Salmonella enterica

text: Salmonella enterica

text: Salmonella enterica


01_ARK 24 HG1

text: public

text: 01_ARK 24 HG1

tag: Namespace:ALFRED WEGENER INSTITUTE FOR POLAR AND MARINE RESE

characteristic: Submitter Id

characteristic: collection date

text: 79°8.03 N _ 6°6.10 E

characteristic: lat lon

text: metagenomes

text: metagenomes

text: ARK 24 HG1


02_ARK 24 HG4

text: ALFRED WEGENER INSTITUTE FOR POLAR AND MARINE RESE

text: public

text: 02_ARK 24 HG4

text: 79°4.03'N _ 4°11.77'E

text: metagenomes

characteristic: organism

text: metagenomes

text: ARK 24 HG4


03_ARK 24 N4

characteristic: ENA-CHECKLIST

text: public

text: 03_ARK 24 N4

text: 79°43.76'N _ 4°28.70'E

text: metagenomes

text: metagenomes

text: ARK 24 N4


04_ARK 24 S3

characteristic: ENA-FIRST-PUBLIC

text: public

text: 04_ARK 24 S3

text: 78°36.45'N _ 5°4.23'E

text: metagenomes

text: metagenomes

text: ARK 24 S3


05_ARK 25 HG1

text: public

text: 05_ARK 25 HG1

text: 79°8.20´N _ 5°5.91´E

text: metagenomes

text: metagenomes

text: ARK 25 HG1


06_ARK 25 HG4

text: public

text: 06_ARK 25 HG4

text: metagenomes

text: metagenomes

text: ARK 25 HG4


07_ARK 25 HG9

text: public

text: 07_ARK 25 HG9

text: metagenomes

text: metagenomes

text: ARK 25 HG9


08_ARK 25 N4

text: public

text: 08_ARK 25 N4

text: metagenomes

text: metagenomes

text: ARK 25 N4


09_ARK 25 S3

text: public

text: 09_ARK 25 S3

text: metagenomes

text: metagenomes

text: ARK 25 S3


10_ARK 26 HG1

text: public

text: 10_ARK 26 HG1

text: metagenomes

text: metagenomes

text: ARK 26 HG1


12_ARK 26 HG9

text: public

text: 12_ARK 26 HG9

text: metagenomes

text: metagenomes

text: ARK 26 HG9


13_ARK 26 N4

text: public

text: 13_ARK 26 N4

text: metagenomes

text: metagenomes

text: ARK 26 N4


14_ARK 26 S3

text: public

text: 14_ARK 26 S3

text: metagenomes

text: metagenomes

text: ARK 26 S3


15_ARK 27 HG1

text: public

text: 15_ARK 27 HG1

text: metagenomes

text: metagenomes

text: ARK 27 HG1


16_ARK 27 HG4

text: public

text: 16_ARK 27 HG4

text: metagenomes

text: metagenomes

text: ARK 27 HG4


17_ARK 27 HG9

text: public

text: 17_ARK 27 HG9

text: metagenomes

text: metagenomes

text: ARK 27 HG9


18_ARK 27 N4

text: public

text: 18_ARK 27 N4

text: metagenomes

text: metagenomes

text: ARK 27 N4


19_ARK 27 S3

text: public

text: 19_ARK 27 S3

text: metagenomes

text: metagenomes

text: ARK 27 S3


20_ARK 28 HG

text: public

text: 20_ARK 28 HG

text: metagenomes

text: metagenomes

text: ARK 28 HG


21_ARK 28 HG4

text: public

text: 21_ARK 28 HG4

text: metagenomes

text: metagenomes

text: ARK 28 HG4


22_ARK 28 N4

text: public

text: 22_ARK 28 N4

text: metagenomes

text: metagenomes

text: ARK 28 N4


23_ARK 28 S3

text: public

text: 23_ARK 28 S3

text: metagenomes

text: metagenomes

text: ARK 28 S3


text: public

tag: Namespace:AARHUS UNIVERSITY, DEPARTMENT OF MOLECULAR BIOLOGY AND GENETICS

text: spectacled caiman

characteristic: common name

text: Liver sample

characteristic: description

text: Adult

characteristic: dev stage

text: Caiman crocodilus

text: Caiman crocodilus

text: Liver

characteristic: tissue type

text: Liver


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UDS

text: public

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis

text: Dekkera bruxellensis, UMY321 isolate

characteristic: title


text: UDS

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis

text: Dekkera bruxellensis, UMY315 isolate


text: UDS

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis

text: Dekkera bruxellensis, 133 isolate


text: AARHUS UNIVERSITY, DEPARTMENT OF MOLECULAR BIOLOGY AND GENETICS

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: spectacled caiman

text: Brain sample

text: Adult

text: Caiman crocodilus

text: Caiman crocodilus

text: Brain

text: Brain


text: public

text: spectacled caiman

text: Kidney sample

text: Adult

text: Caiman crocodilus

text: Caiman crocodilus

text: Kidney

text: Kidney


text: public

tag: Namespace:MRC-University of Glasgow Centre for Virus Research

text: horse

text: Equus caballus

text: Equus caballus


text: MRC-University of Glasgow Centre for Virus Research

text: public

text: horse

text: Equus caballus

text: Equus caballus


text: ERASMUS MC, UNIVERISTY MEDICAL CENTER

text: public

tag: Namespace:ERASMUS MC, UNIVERISTY MEDICAL CENTER

text: human

text: Homo sapiens

text: Homo sapiens


text: ERASMUS MC, UNIVERISTY MEDICAL CENTER

text: public

text: human

text: U2OS infected with C. jejuni Δcas9 Complimented with Cas9 GB11

text: Homo sapiens

text: Homo sapiens


text: ERASMUS MC, UNIVERISTY MEDICAL CENTER

text: public

text: human

text: U20S gamma irradiated

text: Homo sapiens

text: Homo sapiens


text: ERASMUS MC, UNIVERISTY MEDICAL CENTER

text: public

text: human

text: U2OS infectd with CjCas9

text: Homo sapiens

text: Homo sapiens


text: ERASMUS MC, UNIVERISTY MEDICAL CENTER

text: public

text: human

text: U2OS infected with eGFP-CjCas9 at 24h

text: Homo sapiens

text: Homo sapiens


text: ERASMUS MC, UNIVERISTY MEDICAL CENTER

text: public

text: human

text: U2OS infected with eGFP-CjdCas9 at 24h

text: Homo sapiens

text: Homo sapiens


text: ERASMUS MC, UNIVERISTY MEDICAL CENTER

text: public

text: human

text: U2OS infected with eGFP-CjCas9 at 48h

text: Homo sapiens

text: Homo sapiens


text: DUKE-NUS

text: public

text: house mouse

text: Mus musculus

text: HCC

characteristic: phenotype

text: Mus musculus

characteristic: subject id

text: AFB1 treated HbsAg mouse


characteristic: ENA-CHECKLIST

text: DUKE-NUS

text: public

text: house mouse

text: Mus musculus

characteristic: organism

text: HCC

text: Mus musculus

text: AFB1 treated mouse


characteristic: ENA-FIRST-PUBLIC

text: DUKE-NUS

text: public

text: human

characteristic: common name

text: Human cell line

text: Homo sapiens

text: HCC

text: Homo sapiens

text: AFB1 treated cell line


text: Appreciate the Beauty of Life, Inc.

text: public

tag: Namespace:Appreciate the Beauty of Life, Inc.

characteristic: collection date

text: Arch-A-metagenome

characteristic: description

text: microbe

characteristic: environment (biome)

text: hyper arid

characteristic: environment (feature)

text: Sand soil

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

unit: m

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: soil metagenome

text: Metagenomics-Metatranscriptomics of Tarim solis

characteristic: project name

text: soil metagenome

text: illumina next 500

characteristic: sequencing method

text: soil

characteristic: soil environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Appreciate the Beauty of Life, Inc.

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Arch-A-metatranscriptome

text: microbe

text: hyper arid

text: Sand soil

text: China

text: metatranscriptome

text: soil metagenome

characteristic: organism

text: soil metagenome

text: illumina next 500

text: soil

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: public

tag: Namespace:NATIONAL INSTITUTE FOR HEALTH AND WELFARE

text: Salmonella enterica subsp. enterica serovar Enteritidis

text: S. Enteritidis


text: Brain

characteristic: ArrayExpress-PHENOTYPE

text: male

characteristic: ArrayExpress-SEX

text: Mus musculus

characteristic: ArrayExpress-SPECIES

text: SC

text: public

text: house mouse

characteristic: common name

text: Male

characteristic: gender

text: Mus musculus

text: Brain

characteristic: phenotype

text: Mus musculus

characteristic: subject id


text: Lung

text: male

text: Mus musculus

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: house mouse

text: Male

text: Mus musculus

text: Lung

text: Mus musculus


text: Spleen

text: male

text: Mus musculus

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: house mouse

text: Male

text: Mus musculus

text: Spleen

text: Mus musculus


text: Liver

text: male

text: Mus musculus

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: house mouse

text: Male

text: Mus musculus

text: Liver

text: Mus musculus


text: Thymus

text: male

text: Mus musculus

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: house mouse

text: Male

text: Mus musculus

characteristic: organism

text: Thymus

text: Mus musculus

characteristic: title


text: Kidney

characteristic: ArrayExpress-PHENOTYPE

text: male

characteristic: ArrayExpress-SEX

text: Mus musculus

characteristic: ArrayExpress-SPECIES

text: SC

text: public

text: house mouse

text: Male

text: Mus musculus

text: Kidney

text: Mus musculus


text: Campylobacter jejuni

characteristic: ArrayExpress-Species

text: SC

text: public

text: Campylobacter jejuni

characteristic: common name

text: Campylobacter jejuni

text: Campylobacter jejuni

text: MH 30 A


text: Campylobacter jejuni

characteristic: ENA-CHECKLIST

text: SC

text: public

text: Campylobacter jejuni

text: Campylobacter jejuni

text: Campylobacter jejuni

text: CP 30 A


text: Campylobacter jejuni

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: Campylobacter jejuni

text: Campylobacter jejuni

text: Campylobacter jejuni

text: HP1 30A


text: Campylobacter jejuni

characteristic: External Id

text: SC

text: public

text: Campylobacter jejuni

text: Campylobacter jejuni

text: Campylobacter jejuni

text: HP2 30 A


text: Campylobacter jejuni

text: SC

characteristic: INSDC center name

text: public

text: Campylobacter jejuni

text: Campylobacter jejuni

text: Campylobacter jejuni

text: HP3 30 A


text: Campylobacter jejuni

text: SC

characteristic: INSDC first public

text: public

text: Campylobacter jejuni

text: Campylobacter jejuni

text: Campylobacter jejuni

text: MH 5 A


text: Campylobacter jejuni

text: SC

characteristic: INSDC last update

text: public

text: Campylobacter jejuni

text: Campylobacter jejuni

text: Campylobacter jejuni

text: CP 5 A


text: Campylobacter jejuni

text: SC

text: public

characteristic: INSDC status

text: Campylobacter jejuni

text: Campylobacter jejuni

text: Campylobacter jejuni

text: HP1 5A


text: Campylobacter jejuni

text: SC

text: public

characteristic: SRA accession

text: Campylobacter jejuni

text: Campylobacter jejuni

text: Campylobacter jejuni

text: HP2 5 A


text: Campylobacter jejuni

text: SC

text: public

characteristic: Submitter Id

text: Campylobacter jejuni

text: Campylobacter jejuni

text: Campylobacter jejuni

text: HP3 5 A


text: Campylobacter jejuni

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: Campylobacter jejuni

text: Campylobacter jejuni

text: Campylobacter jejuni

text: CP 100 B


text: Campylobacter jejuni

text: SC

text: public

text: Campylobacter jejuni

text: Campylobacter jejuni

characteristic: organism

text: Campylobacter jejuni

text: HP1 100 B


text: Campylobacter jejuni

text: SC

text: public

text: Campylobacter jejuni

text: Campylobacter jejuni

text: Campylobacter jejuni

text: HP2 100 B

characteristic: title


text: Campylobacter jejuni

text: SC

text: public

text: Campylobacter jejuni

text: Campylobacter jejuni

text: Campylobacter jejuni

text: HP3 100 B


text: Campylobacter jejuni

text: SC

text: public

text: Campylobacter jejuni

text: Campylobacter jejuni

text: Campylobacter jejuni

text: MH 30 B


text: Campylobacter jejuni

text: SC

text: public

text: Campylobacter jejuni

text: Campylobacter jejuni

text: Campylobacter jejuni

text: CP 30 B


text: Campylobacter jejuni

text: SC

text: public

text: Campylobacter jejuni

text: Campylobacter jejuni

text: Campylobacter jejuni

text: HP1 30B


text: Campylobacter jejuni

text: SC

text: public

text: Campylobacter jejuni

text: Campylobacter jejuni

text: Campylobacter jejuni

text: HP2 30 B


text: Campylobacter jejuni

text: SC

text: public

text: Campylobacter jejuni

text: Campylobacter jejuni

text: Campylobacter jejuni

text: HP3 30 B


text: Campylobacter jejuni

text: SC

text: public

text: Campylobacter jejuni

text: Campylobacter jejuni

text: Campylobacter jejuni

text: MH 5 B


text: Campylobacter jejuni

text: SC

text: public

text: Campylobacter jejuni

text: Campylobacter jejuni

text: Campylobacter jejuni

text: CP 5 B


text: Campylobacter jejuni

text: SC

text: public

text: Campylobacter jejuni

text: Campylobacter jejuni

text: Campylobacter jejuni

text: HP1 5B


text: Campylobacter jejuni

text: SC

text: public

text: Campylobacter jejuni

text: Campylobacter jejuni

text: Campylobacter jejuni

text: HP2 5 B


text: Campylobacter jejuni

text: SC

text: public

text: Campylobacter jejuni

text: Campylobacter jejuni

text: Campylobacter jejuni

text: HP3 5 B


E-MTAB-5812:wa3-1 12 weeks fastq

text: public

text: E-MTAB-5812:wa3-1 12 weeks fastq

tag: Namespace:Faculty of medicine, Bar Ilan university.

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

text: Protocols: Mice raised under spf conditions Mice were injected with 5mg/kg body weight intra-peritoneal and sacrificed after 2 hr. rna was extracted using norgen total rna kit neb next ultra rna seq kit using multiplexed indexes

characteristic: description

text: mouse postnatal

characteristic: developmental stage

text: dilated cardiomyopathy

characteristic: disease

text: spontaneus mutation in ppp1r13l gene

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: heart

characteristic: organism part

text: Mus musculus

text: BALB/c

characteristic: strain

text: wa3-1 12 weeks fastq

type: has member


E-MTAB-5812:wa3-1 7 weeks fastq

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Faculty of medicine, Bar Ilan university.

characteristic: INSDC center name

text: public

text: E-MTAB-5812:wa3-1 7 weeks fastq

text: ArrayExpress

text: house mouse

characteristic: common name

text: mouse postnatal

text: dilated cardiomyopathy

text: spontaneus mutation in ppp1r13l gene

text: Mus musculus

text: Mus musculus

text: heart

text: Mus musculus

text: BALB/c

text: wa3-1 7 weeks fastq


E-MTAB-5812:wa3-2 12 weeks fastq

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5812:wa3-2 12 weeks fastq

characteristic: Submitter Id

text: ArrayExpress

text: house mouse

text: mouse postnatal

text: dilated cardiomyopathy

text: spontaneus mutation in ppp1r13l gene

text: Mus musculus

text: Mus musculus

text: heart

text: Mus musculus

text: BALB/c

text: wa3-2 12 weeks fastq


E-MTAB-5812:wa3-2 7 weeks fastq

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-5812:wa3-2 7 weeks fastq

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

text: mouse postnatal

text: dilated cardiomyopathy

text: spontaneus mutation in ppp1r13l gene

text: Mus musculus

characteristic: organism

text: Mus musculus

text: heart

text: Mus musculus

text: BALB/c

text: wa3-2 7 weeks fastq

characteristic: title


E-MTAB-5812:wa3_1 12w lps

text: public

text: E-MTAB-5812:wa3_1 12w lps

text: ArrayExpress

text: house mouse

characteristic: description

text: mouse postnatal

characteristic: developmental stage

text: dilated cardiomyopathy

characteristic: disease

text: spontaneus mutation in ppp1r13l gene

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: heart

characteristic: organism part

text: Mus musculus

text: BALB/c

text: wa3_1 12w lps


E-MTAB-5812:wa3_2 12w lps

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-5812:wa3_2 12w lps

text: ArrayExpress

text: house mouse

text: mouse postnatal

text: dilated cardiomyopathy

text: spontaneus mutation in ppp1r13l gene

text: Mus musculus

text: Mus musculus

text: heart

text: Mus musculus

text: BALB/c

characteristic: strain

text: wa3_2 12w lps


E-MTAB-5812:wt-1 7 weeks dastq

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5812:wt-1 7 weeks dastq

text: ArrayExpress

text: house mouse

characteristic: common name

text: mouse postnatal

text: normal

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: heart

text: Mus musculus

text: BALB/c

text: wt-1 7 weeks dastq


E-MTAB-5812:wt-1-12 weeks fastq

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-5812:wt-1-12 weeks fastq

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

text: mouse postnatal

text: normal

text: wild type genotype

text: Mus musculus

characteristic: organism

text: Mus musculus

text: heart

text: Mus musculus

text: BALB/c

text: wt-1-12 weeks fastq


E-MTAB-5812:wt-2 7 weeks fastq

text: public

text: E-MTAB-5812:wt-2 7 weeks fastq

text: ArrayExpress

text: house mouse

characteristic: description

text: mouse postnatal

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: heart

text: Mus musculus

text: BALB/c

text: wt-2 7 weeks fastq

characteristic: title


E-MTAB-5812:wt-2-12 weeks fastq

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-5812:wt-2-12 weeks fastq

text: ArrayExpress

text: house mouse

text: mouse postnatal

text: normal

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: heart

characteristic: organism part

text: Mus musculus

text: BALB/c

text: wt-2-12 weeks fastq


E-MTAB-5812:wt1 12w lps

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5812:wt1 12w lps

text: ArrayExpress

text: house mouse

text: mouse postnatal

text: normal

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: heart

text: Mus musculus

text: BALB/c

characteristic: strain

text: wt1 12w lps


E-MTAB-5812:wt2 12w lps

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-5812:wt2 12w lps

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: mouse postnatal

text: normal

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: heart

text: Mus musculus

text: BALB/c

text: wt2 12w lps


E-MTAB-5816:Hesx1 MUT C11

text: public

text: E-MTAB-5816:Hesx1 MUT C11

tag: Namespace:UCL Institute of Child Health Developmental Biology and Cancer Programme

text: ArrayExpress

text: embryonic cell line

characteristic: cell line

text: embryonic stem cell

characteristic: cell type

text: house mouse

text: Protocols: 3X Hesx1+/+ and Hesx1-/- ES cell clones were cultured in 2i/LIF conditions for 5 passages. Subsequently, culture medium was deprived of 2i/LIF and cell pellets were collected 24 hours after removal. Cell pellets from Hesx1+/+ and Hesx1-/- ES cells were processed for total RNA extracion using Trizol reagent (Invitrogen) cDNA library preparation was performed using 250ng of total RNA using the Kapa mRNA library prep kit (Kapa Biosystems) with 12 cycles of PCR

characteristic: description

text: Hesx1 knockout

characteristic: genotype

text: serum/LIF deprived for 24 hours

characteristic: growth condition

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Mus musculus

text: Hesx1 MUT C11


E-MTAB-5816:Hesx1 MUT C16

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCL Institute of Child Health Developmental Biology and Cancer Programme

characteristic: INSDC center name

text: public

text: E-MTAB-5816:Hesx1 MUT C16

text: ArrayExpress

text: embryonic cell line

text: embryonic stem cell

text: house mouse

text: Hesx1 knockout

text: serum/LIF deprived for 24 hours

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Hesx1 MUT C16

characteristic: title


E-MTAB-5816:Hesx1 WT C13

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5816:Hesx1 WT C13

text: ArrayExpress

text: embryonic cell line

text: embryonic stem cell

text: house mouse

text: wild type genotype

text: serum/LIF deprived for 24 hours

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Hesx1 WT C13


E-MTAB-5816:Hesx1 WT C2

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-5816:Hesx1 WT C2

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: embryonic cell line

text: embryonic stem cell

text: house mouse

text: wild type genotype

text: serum/LIF deprived for 24 hours

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Hesx1 WT C2


E-MTAB-5816:Hesx1 WT C3

text: public

text: E-MTAB-5816:Hesx1 WT C3

text: ArrayExpress

text: embryonic cell line

characteristic: cell line

text: embryonic stem cell

characteristic: cell type

text: house mouse

characteristic: common name

text: wild type genotype

text: serum/LIF deprived for 24 hours

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Hesx1 WT C3


text: OX

text: public

characteristic: description

text: Escherichia coli

text: Escherichia coli


text: OX

text: public

text: Klebsiella pneumoniae

characteristic: organism

text: Klebsiella pneumoniae


characteristic: ENA-CHECKLIST

text: public

tag: Namespace:Faculty of medicine in safed, Bar-Ilan university

text: ArrayExpress

text: cardiac myocyte

text: house mouse

text: Protocols: Cardiomyocytes were isolated from neonatal mice and seeded on gelatin. In particular, Mouse neonatal cardiomyocytes were isolated using Worthington Rat neonatal isolation kit. Briefly, hearts were isolated from 1‐ to 4‐day‐old BALB/c mice, minced, and incubated overnight at 4°C. Trypsin inhibitor was added, and heart pieces were incubated for 35 min in the presence of collagenase at 37°C. Cells were passed through 100‐μm cell strainer, fibroblasts were removed by adhesion for 2 h, and non‐adhered cells were centrifuged (50 g/5 min) and seeded at concentration of 3 × 104 cells/well in gelatin‐coated 6‐well plates in a myocytes growth medium (promocell) for 5 days. ShRNA was delivered by lentiviruses and LPS stimulation was given after 72 hours. The results are of two biological replicates. 500 ng LPS stimulation for 2 and 4 hours RNA was extracted using Norgen RNA isolation kit. nebnext ultra rna seq kit, multiplexed

text: mouse postnatal

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: no stimulus

characteristic: stimulus

unit: hour

characteristic: time


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Faculty of medicine in safed, Bar-Ilan university

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ArrayExpress

text: cardiac myocyte

text: house mouse

text: mouse postnatal

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: no stimulus

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: cardiac myocyte

text: house mouse

text: mouse postnatal

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: lipopolysaccharide


text: University of Szeged

text: public

tag: Namespace:University of Szeged

text: human

characteristic: common name

text: tooth

characteristic: isolation source

text: Homo sapiens

text: Homo sapiens


Listeria sp. ILCC793

characteristic: ENA-CHECKLIST

text: JUSTUS LIEBIG UNIVERSITY

text: public

text: Listeria sp. ILCC793

tag: Namespace:JUSTUS LIEBIG UNIVERSITY

text: Listeria sp. ILCC801

characteristic: organism

text: Listeria sp. ILCC801

text: Listeria sp. ILCC793


Listeria sp. ILCC801

text: JUSTUS LIEBIG UNIVERSITY

text: public

text: Listeria sp. ILCC801

text: Listeria sp. ILCC801

text: Listeria sp. ILCC801

text: Listeria sp. ILCC801


text: University of Szeged

text: public

text: human

text: bone

text: Homo sapiens

text: Homo sapiens

text: Conq


CANPSY

text: public

text: CANPSY

tag: Namespace:Comenius University, Faculty of Mathematics, Physics and Informatics

text: Candida psychrophila is an Antarctic, obligate psychrophilic yeast classified into the family Debaryomycetaceae (Saccharomycotina). Here, we report the draft genome sequence of the type strain, NRRL Y-17665.

characteristic: description

text: Candida psychrophila

text: Candida psychrophila

text: Candida psychrophila NRRL Y-17665


name: E-MTAB-5701:DV92 24 Hour Cold Replicate 1

tag: attribute

text: OREGON STATE UNIVERS

text: public

tag: Namespace:OREGON STATE UNIVERS

text: ArrayExpress

characteristic: broker name

text: Protocols: Plants were grown in normal greenhouse growth conditions Control samples were maintained at normal conditions at 23 degrees Celsius for 24 hours. Cold samples were exposed to temperature of 4 degrees Celsius for 24 hours. Total RNA was extracted from frozen plant tissue. Invitrogen Plant RNA Reagent, chloroform, isopropanol, and DNAse were used to obtain RNA. Qiagen RNA cleanup kit was used to remove any enzymes used in extraction. Single-end libraries were quantified by qPCR and prepared using an Illumina TruSeq RNA prep kit

text: seedling

characteristic: developmental stage

text: spring wheat, frost-sensitive

characteristic: genotype

text: germination

characteristic: initial time point

text: Triticum monococcum subsp. monococcum

text: Triticum monococcum subsp. monococcum

text: leaf

characteristic: organism part

unit: day

characteristic: sampling time point

text: Triticum monococcum subsp. monococcum

text: accession DV92

characteristic: strain

text: DV92 24 Hour Cold Replicate 1


name: E-MTAB-5701:DV92 24 Hour Cold Replicate 2

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: OREGON STATE UNIVERS

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ArrayExpress

text: seedling

text: spring wheat, frost-sensitive

text: germination

text: Triticum monococcum subsp. monococcum

text: Triticum monococcum subsp. monococcum

text: leaf

text: Triticum monococcum subsp. monococcum

text: accession DV92

text: DV92 24 Hour Cold Replicate 2

characteristic: title


name: E-MTAB-5701:DV92 24 Hour Cold Replicate 3

text: OREGON STATE UNIVERS

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: seedling

text: spring wheat, frost-sensitive

text: germination

text: Triticum monococcum subsp. monococcum

text: Triticum monococcum subsp. monococcum

text: leaf

text: Triticum monococcum subsp. monococcum

text: accession DV92

text: DV92 24 Hour Cold Replicate 3


E-MTAB-5701:DV92 Control Replicate 1

characteristic: ENA-CHECKLIST

text: OREGON STATE UNIVERS

text: public

text: E-MTAB-5701:DV92 Control Replicate 1

text: ArrayExpress

characteristic: broker name

characteristic: description

text: seedling

text: spring wheat, frost-sensitive

text: germination

text: Triticum monococcum subsp. monococcum

characteristic: organism

text: Triticum monococcum subsp. monococcum

text: leaf

text: Triticum monococcum subsp. monococcum

text: accession DV92

text: DV92 Control Replicate 1


E-MTAB-5701:DV92 Control Replicate 2

text: OREGON STATE UNIVERS

text: public

text: E-MTAB-5701:DV92 Control Replicate 2

text: ArrayExpress

text: seedling

characteristic: developmental stage

text: spring wheat, frost-sensitive

characteristic: genotype

text: germination

characteristic: initial time point

text: Triticum monococcum subsp. monococcum

text: Triticum monococcum subsp. monococcum

text: leaf

characteristic: organism part

text: Triticum monococcum subsp. monococcum

text: accession DV92

text: DV92 Control Replicate 2


E-MTAB-5701:DV92 Control Replicate 3

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: OREGON STATE UNIVERS

text: public

text: E-MTAB-5701:DV92 Control Replicate 3

text: ArrayExpress

text: seedling

text: spring wheat, frost-sensitive

text: germination

text: Triticum monococcum subsp. monococcum

text: Triticum monococcum subsp. monococcum

text: leaf

characteristic: sampling time point

text: Triticum monococcum subsp. monococcum

text: accession DV92

characteristic: strain

text: DV92 Control Replicate 3


name: E-MTAB-5701:G3116 24 Hour Cold Replicate 1

characteristic: External Id

text: OREGON STATE UNIVERS

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ArrayExpress

text: seedling

text: winter wheat, frost-tolerant

text: germination

text: Triticum monococcum subsp. aegilopoides

text: Triticum monococcum subsp. aegilopoides

text: leaf

text: Triticum monococcum subsp. aegilopoides

text: accession G3116

text: G3116 24 Hour Cold Replicate 1

characteristic: title


name: E-MTAB-5701:G3116 24 Hour Cold Replicate 2

text: OREGON STATE UNIVERS

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: seedling

text: winter wheat, frost-tolerant

text: germination

text: Triticum monococcum subsp. aegilopoides

text: Triticum monococcum subsp. aegilopoides

text: leaf

text: Triticum monococcum subsp. aegilopoides

text: accession G3116

text: G3116 24 Hour Cold Replicate 2


name: E-MTAB-5701:G3116 24 Hour Cold Replicate 3

characteristic: ENA-CHECKLIST

text: OREGON STATE UNIVERS

text: public

text: ArrayExpress

characteristic: broker name

characteristic: description

text: seedling

text: winter wheat, frost-tolerant

text: germination

text: Triticum monococcum subsp. aegilopoides

characteristic: organism

text: Triticum monococcum subsp. aegilopoides

text: leaf

text: Triticum monococcum subsp. aegilopoides

text: accession G3116

text: G3116 24 Hour Cold Replicate 3


E-MTAB-5701:G3116 Control Replicate 1

text: OREGON STATE UNIVERS

text: public

text: E-MTAB-5701:G3116 Control Replicate 1

text: ArrayExpress

text: seedling

characteristic: developmental stage

text: winter wheat, frost-tolerant

characteristic: genotype

text: germination

characteristic: initial time point

text: Triticum monococcum subsp. aegilopoides

text: Triticum monococcum subsp. aegilopoides

text: leaf

characteristic: organism part

text: Triticum monococcum subsp. aegilopoides

text: accession G3116

text: G3116 Control Replicate 1


E-MTAB-5701:G3116 Control Replicate 2

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: OREGON STATE UNIVERS

text: public

text: E-MTAB-5701:G3116 Control Replicate 2

text: ArrayExpress

text: seedling

text: winter wheat, frost-tolerant

text: germination

text: Triticum monococcum subsp. aegilopoides

text: Triticum monococcum subsp. aegilopoides

text: leaf

characteristic: sampling time point

text: Triticum monococcum subsp. aegilopoides

text: accession G3116

characteristic: strain

text: G3116 Control Replicate 2


E-MTAB-5701:G3116 Control Replicate 3

characteristic: External Id

text: OREGON STATE UNIVERS

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-5701:G3116 Control Replicate 3

text: ArrayExpress

text: seedling

text: winter wheat, frost-tolerant

text: germination

text: Triticum monococcum subsp. aegilopoides

text: Triticum monococcum subsp. aegilopoides

text: leaf

text: Triticum monococcum subsp. aegilopoides

text: accession G3116

text: G3116 Control Replicate 3

characteristic: title


E-MTAB-5737:Sample 1

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5737:Sample 1

tag: Namespace:1) Department of Mathematical and Statistical Methods, Poznan University of Life Sciences 2) Institute of Plant Genetics, Polish Academy of Sciences

characteristic: Submitter Id

text: ArrayExpress

text: thale cress

characteristic: common name

text: Protocols: Plants of the shoot-phloem-companion-cell-tagged INTACT reporter line (Transgenic SUC2::redNTF and UBQ10::BirA in Col-0 background) were cultivated in growth chambers, in short-day (SD) conditions (8 h light/16 h dark) for 21 days and then shifted to long-day (LD) conditions (16 h light/8 h dark) to induce flowering. The growth-chamber condition was at 23°C with 65% relative humidity, and with the light at a fluence rate of 125 to 175 μmol m−2 s−1. ChIP DNA was prepared from INTACT purified nuclei from the meristem, as described in Deal, R. B. & Henikoff, S. (2010) Nat. Protoc. 6, 56-68; and You et al. (2017): DOI: 10.1038/ncomms15120. Libraries were prepared from approximately 50 pg of ChIP DNA using the ThruPlex-FD Prep Kit (Rubicon Genomics)

text: short day

characteristic: growth condition

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot phloem companion cells

characteristic: replicate

text: Arabidopsis thaliana

text: Sample 1


E-MTAB-5737:Sample 2

characteristic: ENA-CHECKLIST

text: 1) Department of Mathematical and Statistical Methods, Poznan University of Life Sciences 2) Institute of Plant Genetics, Polish Academy of Sciences

text: public

text: E-MTAB-5737:Sample 2

text: ArrayExpress

characteristic: broker name

text: thale cress

characteristic: description

text: short day

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: shoot phloem companion cells

text: Arabidopsis thaliana

text: Sample 2


E-MTAB-5737:Sample 3

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-5737:Sample 3

text: ArrayExpress

text: thale cress

text: short day

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot phloem companion cells

characteristic: organism part

text: Arabidopsis thaliana

text: Sample 3


E-MTAB-5737:Sample 4

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-5737:Sample 4

text: ArrayExpress

text: thale cress

text: long day

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot phloem companion cells

text: Arabidopsis thaliana

text: Sample 4


E-MTAB-5737:Sample 5

characteristic: INSDC first public

text: public

text: E-MTAB-5737:Sample 5

text: ArrayExpress

text: thale cress

text: long day

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot phloem companion cells

text: Arabidopsis thaliana

text: Sample 5

characteristic: title


E-MTAB-5737:Sample 6

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5737:Sample 6

text: ArrayExpress

text: thale cress

text: long day

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot phloem companion cells

text: Arabidopsis thaliana

text: Sample 6


E-MTAB-5737:Sample 7

text: public

characteristic: SRA accession

text: E-MTAB-5737:Sample 7

characteristic: Submitter Id

text: ArrayExpress

text: thale cress

text: long day

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot phloem companion cells

text: Arabidopsis thaliana

text: Sample 7


E-MTAB-5737:Sample 8

text: public

text: E-MTAB-5737:Sample 8

text: ArrayExpress

text: thale cress

characteristic: common name

text: long day

characteristic: growth condition

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot phloem companion cells

text: Arabidopsis thaliana

text: Sample 8


E-MTAB-5737:Sample 9

characteristic: ENA-CHECKLIST

text: public

text: E-MTAB-5737:Sample 9

text: ArrayExpress

text: thale cress

text: long day

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot phloem companion cells

characteristic: replicate

text: Arabidopsis thaliana

text: Sample 9


E-MTAB-5737:Sample 10

text: public

text: E-MTAB-5737:Sample 10

text: ArrayExpress

characteristic: broker name

text: thale cress

characteristic: description

text: long day

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot phloem companion cells

text: Arabidopsis thaliana

text: Sample 10


E-MTAB-5737:Sample 11

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-5737:Sample 11

text: ArrayExpress

text: thale cress

text: long day

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: shoot phloem companion cells

text: Arabidopsis thaliana

text: Sample 11


E-MTAB-5737:Sample 12

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-5737:Sample 12

text: ArrayExpress

text: thale cress

text: long day

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot phloem companion cells

characteristic: organism part

text: Arabidopsis thaliana

text: Sample 12


E-MTAB-5737:Sample 13

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-5737:Sample 13

text: ArrayExpress

text: thale cress

text: short day

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot phloem companion cells

text: Arabidopsis thaliana

text: Sample 13


E-MTAB-5737:Sample 14

characteristic: INSDC first public

text: public

text: E-MTAB-5737:Sample 14

text: ArrayExpress

text: thale cress

text: short day

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot phloem companion cells

text: Arabidopsis thaliana

text: Sample 14

characteristic: title


E-MTAB-5737:Sample 15

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5737:Sample 15

text: ArrayExpress

text: thale cress

text: short day

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot phloem companion cells

text: Arabidopsis thaliana

text: Sample 15


E-MTAB-5737:Sample 16

text: public

characteristic: SRA accession

text: E-MTAB-5737:Sample 16

characteristic: Submitter Id

text: ArrayExpress

text: thale cress

text: long day

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot phloem companion cells

text: Arabidopsis thaliana

text: Sample 16


E-MTAB-5737:Sample 17

text: public

text: E-MTAB-5737:Sample 17

text: ArrayExpress

text: thale cress

characteristic: common name

text: long day

characteristic: growth condition

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot phloem companion cells

text: Arabidopsis thaliana

text: Sample 17


E-MTAB-5737:Sample 18

characteristic: ENA-CHECKLIST

text: public

text: E-MTAB-5737:Sample 18

text: ArrayExpress

text: thale cress

text: long day

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot phloem companion cells

characteristic: replicate

text: Arabidopsis thaliana

text: Sample 18


E-MTAB-5737:Sample 19

text: public

text: E-MTAB-5737:Sample 19

text: ArrayExpress

characteristic: broker name

text: thale cress

characteristic: description

text: long day

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot phloem companion cells

text: Arabidopsis thaliana

text: Sample 19


E-MTAB-5737:Sample 20

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-5737:Sample 20

text: ArrayExpress

text: thale cress

text: long day

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: shoot phloem companion cells

text: Arabidopsis thaliana

text: Sample 20


E-MTAB-5737:Sample 21

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-5737:Sample 21

text: ArrayExpress

text: thale cress

text: long day

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot phloem companion cells

characteristic: organism part

text: Arabidopsis thaliana

text: Sample 21


E-MTAB-5737:Sample 22

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-5737:Sample 22

text: ArrayExpress

text: thale cress

text: long day

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot phloem companion cells

text: Arabidopsis thaliana

text: Sample 22


E-MTAB-5737:Sample 23

characteristic: INSDC first public

text: public

text: E-MTAB-5737:Sample 23

text: ArrayExpress

text: thale cress

text: long day

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot phloem companion cells

text: Arabidopsis thaliana

text: Sample 23

characteristic: title


E-MTAB-5737:Sample 24

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5737:Sample 24

text: ArrayExpress

text: thale cress

text: long day

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot phloem companion cells

text: Arabidopsis thaliana

text: Sample 24


E-MTAB-5736:Sample 1

text: public

characteristic: SRA accession

text: E-MTAB-5736:Sample 1

characteristic: Submitter Id

text: ArrayExpress

text: thale cress

text: Protocols: For each biological replicate, approximately 500 INTACT reporter plants were grown in SDs for 21 days before shifting to LDs. The 0LD, 1LD, 2LD and 3LD samples were collected on the 21st day in SDs and 1, 2, and 3 days after the shift to LD. For each sample, the whole shoot material was collected from approximately 120 seedlings and frozen immediately in Eppendorf tubes suspended in liquid nitrogen. Plants of the shoot-phloem-companion-cell-tagged INTACT reporter line (Transgenic SUC2::redNTF and UBQ10::BirA in Col-0 background) were cultivated in growth chambers, in short-day (SD) conditions (8 h light/16 h dark) for 21 days and then shifted to long-day (LD) conditions (16 h light/8 h dark) to induce flowering. The growth-chamber condition was at 23°C with 65% relative humidity, and with the light at a fluence rate of 125 to 175 μmol m−2 s−1. Total nuclear RNA was extracted from approximately 10,000 nuclei of each sample using the RNeasy Micro Kit (Qiagen). Genomic DNA was removed by DNase I treatment (Thermo Scientific). Double-strand cDNA was synthesized and linearly amplified (Clontech SMARTer Ultra Low Input RNA for Illumina Sequencing-HV kit). Low Input Library Prep Kit (Clontech) was used for preparation of sequencing libraries

text: Floral transition

characteristic: developmental stage

characteristic: ecotype

text: Shoot-phloem-companion-cell-tagged INTACT reporter line containing two transgenes: pSUC2::RedNTF, pUBQ10::BirA

characteristic: genotype

text: short day

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot phloem companion cells

text: Arabidopsis thaliana

text: Sample 1


E-MTAB-5736:Sample 2

characteristic: ENA-CHECKLIST

text: public

text: E-MTAB-5736:Sample 2

text: ArrayExpress

characteristic: broker name

text: thale cress

characteristic: common name

text: Floral transition

text: short day

characteristic: growth condition

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot phloem companion cells

characteristic: replicate

text: Arabidopsis thaliana

text: Sample 2


E-MTAB-5736:Sample 3

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-5736:Sample 3

text: ArrayExpress

text: thale cress

characteristic: description

text: Floral transition

text: short day

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: shoot phloem companion cells

characteristic: organism part

text: Arabidopsis thaliana

text: Sample 3


E-MTAB-5736:Sample 4

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-5736:Sample 4

text: ArrayExpress

text: thale cress

text: Floral transition

text: long day

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot phloem companion cells

text: Arabidopsis thaliana

text: Sample 4

characteristic: title


E-MTAB-5736:Sample 5

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5736:Sample 5

characteristic: Submitter Id

text: ArrayExpress

text: thale cress

text: Floral transition

characteristic: developmental stage

characteristic: ecotype

text: long day

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot phloem companion cells

text: Arabidopsis thaliana

text: Sample 5


E-MTAB-5736:Sample 6

characteristic: ENA-CHECKLIST

text: public

text: E-MTAB-5736:Sample 6

text: ArrayExpress

characteristic: broker name

text: thale cress

characteristic: common name

text: Floral transition

characteristic: genotype

text: long day

characteristic: growth condition

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot phloem companion cells

text: Arabidopsis thaliana

text: Sample 6


E-MTAB-5736:Sample 7

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-5736:Sample 7

text: ArrayExpress

text: thale cress

characteristic: description

text: Floral transition

text: long day

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: shoot phloem companion cells

characteristic: replicate

text: Arabidopsis thaliana

text: Sample 7


E-MTAB-5736:Sample 8

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-5736:Sample 8

text: ArrayExpress

text: thale cress

text: Floral transition

text: long day

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot phloem companion cells

characteristic: organism part

text: Arabidopsis thaliana

text: Sample 8


E-MTAB-5736:Sample 9

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5736:Sample 9

characteristic: Submitter Id

text: ArrayExpress

text: thale cress

text: Floral transition

characteristic: developmental stage

text: long day

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot phloem companion cells

text: Arabidopsis thaliana

text: Sample 9

characteristic: title


E-MTAB-5736:Sample 10

characteristic: ENA-CHECKLIST

text: public

text: E-MTAB-5736:Sample 10

text: ArrayExpress

characteristic: broker name

text: thale cress

characteristic: common name

text: Floral transition

characteristic: ecotype

characteristic: genotype

text: long day

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot phloem companion cells

text: Arabidopsis thaliana

text: Sample 10


E-MTAB-5736:Sample 11

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-5736:Sample 11

text: ArrayExpress

text: thale cress

characteristic: description

text: Floral transition

text: long day

characteristic: growth condition

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: shoot phloem companion cells

text: Arabidopsis thaliana

text: Sample 11


E-MTAB-5736:Sample 12

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-5736:Sample 12

text: ArrayExpress

text: thale cress

text: Floral transition

text: long day

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot phloem companion cells

characteristic: replicate

text: Arabidopsis thaliana

text: Sample 12


text: NATIONAL CENTRE FOR BIOLOGICAL SCIENCES

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:NATIONAL CENTRE FOR BIOLOGICAL SCIENCES

characteristic: Submitter Id

characteristic: collection date

text: EnvO

characteristic: environment (biome)

text: EnvO

characteristic: environment (feature)

text: EnvO

characteristic: environment (material)

text: India

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: insect gut metagenome

text: Bacterial communities associated with butterflies

characteristic: project name

text: insect gut metagenome

text: Illumina

characteristic: sequencing method

text: Leptotes pilinis (Adult1)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NATIONAL CENTRE FOR BIOLOGICAL SCIENCES

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: EnvO

text: EnvO

text: EnvO

text: India

text: host-associated

text: metagenome

text: insect gut metagenome

characteristic: organism

text: insect gut metagenome

text: Illumina

text: Leptotes pilinis (Adult2)

characteristic: title


text: NATIONAL CENTRE FOR BIOLOGICAL SCIENCES

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: EnvO

characteristic: environment (biome)

text: EnvO

characteristic: environment (feature)

text: EnvO

text: India

text: host-associated

text: metagenome

text: insect gut metagenome

text: insect gut metagenome

text: Illumina

text: Leptotes pilinis (Adult3)


text: NATIONAL CENTRE FOR BIOLOGICAL SCIENCES

text: public

text: EnvO

text: EnvO

text: EnvO

characteristic: environment (material)

text: India

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: insect gut metagenome

characteristic: project name

text: insect gut metagenome

text: Illumina

text: Leptotes pilinis (Adult4)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NATIONAL CENTRE FOR BIOLOGICAL SCIENCES

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: EnvO

text: EnvO

text: EnvO

text: India

text: host-associated

text: metagenome

text: insect gut metagenome

text: insect gut metagenome

text: Illumina

characteristic: sequencing method

text: Leptotes pilinis (Adult5)


text: NATIONAL CENTRE FOR BIOLOGICAL SCIENCES

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: EnvO

text: EnvO

text: EnvO

text: India

text: host-associated

text: metagenome

text: insect gut metagenome

characteristic: organism

text: insect gut metagenome

text: Illumina

text: Leptotes pilinis (Larva1)

characteristic: title


text: NATIONAL CENTRE FOR BIOLOGICAL SCIENCES

text: public

text: EnvO

characteristic: environment (biome)

text: EnvO

characteristic: environment (feature)

text: EnvO

characteristic: environment (material)

text: India

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

text: insect gut metagenome

text: insect gut metagenome

text: Illumina

text: Leptotes pilinis (Larva2)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NATIONAL CENTRE FOR BIOLOGICAL SCIENCES

characteristic: INSDC center name

text: public

text: EnvO

text: EnvO

text: EnvO

text: India

text: host-associated

text: metagenome

characteristic: investigation type

text: insect gut metagenome

characteristic: project name

text: insect gut metagenome

text: Illumina

text: Leptotes pilinis (Larva3)


text: NATIONAL CENTRE FOR BIOLOGICAL SCIENCES

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: EnvO

text: EnvO

text: EnvO

text: India

text: host-associated

text: metagenome

text: insect gut metagenome

text: insect gut metagenome

text: Illumina

characteristic: sequencing method

text: Leptotes pilinis (Larva4)


text: public

tag: Namespace:Universidad de Antioquia, Programa de Ofidismo y Escorpionismo

text: 2 venom glands

characteristic: amount or size of sample collected

text: BRAEMBL

characteristic: broker name

text: Nucleic acid sequences and peptide sequences from venom-gland preparations from the Colombian tarantula Pamphobeteus verdolaga

characteristic: description

text: Colombia

characteristic: geographic location (country and/or sea)

text: La Estrella, Antioquia

characteristic: geographic location (region and locality)

characteristic: lat lon

text: Pamphobeteus verdolaga

characteristic: organism

text: Aerobe

characteristic: relationship to oxygen

text: venom-gland dissection

characteristic: sample collection device or method

text: Pamphobeteus verdolaga

text: Pamphobeteus verdolaga

characteristic: title


hagfishtestis

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RIKEN CENTER FOR DEVELOPMENTAL BIOLOGY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: hagfishtestis

tag: Namespace:RIKEN CENTER FOR DEVELOPMENTAL BIOLOGY

text: inshore hagfish

characteristic: common name

text: Japan

text: Eptatretus burgeri

text: Eptatretus burgeri

text: male

characteristic: sex

text: Hagfish Genome: testis (germ line)


text: IOA

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: gray big-eared bat

text: Plecotus austriacus

text: Plecotus austriacus


text: RIVM

text: public

text: Klebsiella pneumoniae

text: Netherlands

characteristic: geographic location (country and/or sea)

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: RIVM

text: public

text: Escherichia coli

text: Netherlands

text: Escherichia coli

characteristic: organism

text: Escherichia coli


text: Life Sciences Research Unit

text: public

tag: Namespace:Life Sciences Research Unit

text: ST2 differentiated in adipocytes

characteristic: cell type

text: house mouse

text: ChIP DNA for ST2 cells differentiated into adipocytes for 1 day

characteristic: description

text: Life Sciences Research Unit, University of Luxembourg

characteristic: lab host

text: Mus musculus

text: Mus musculus

text: male


characteristic: ENA-CHECKLIST

text: Life Sciences Research Unit

text: public

text: ST2 differentiated in adipocytes

text: house mouse

text: ChIP DNA for ST2 cells differentiated into adipocytes for 3 days

text: Mus musculus

text: Mus musculus

text: male

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Life Sciences Research Unit

text: public

text: ST2 differentiated in adipocytes

text: house mouse

text: ChIP DNA for ST2 cells differentiated into adipocytes for 5 days

text: Mus musculus

text: Mus musculus

text: male


characteristic: External Id

text: Life Sciences Research Unit

characteristic: INSDC center name

text: public

text: ST2 differentiated in adipocytes

text: house mouse

text: ChIP DNA for ST2 cells differentiated into adipocytes for 9 days

text: Mus musculus

text: Mus musculus

text: male


text: Life Sciences Research Unit

characteristic: INSDC first public

text: public

text: ST2 differentiated in osteoblasts

text: house mouse

characteristic: common name

text: ChIP DNA for ST2 cells differentiated into osteoblasts for 1 day

text: Mus musculus

text: Mus musculus

text: male


text: Life Sciences Research Unit

characteristic: INSDC last update

text: public

text: ST2 differentiated in osteoblasts

text: house mouse

text: ChIP DNA for ST2 cells differentiated into osteoblasts for 3 days

text: Mus musculus

text: Mus musculus

text: male

characteristic: sex


text: Life Sciences Research Unit

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ST2 differentiated in osteoblasts

text: house mouse

text: ChIP DNA for ST2 cells differentiated into osteoblasts for 5 days

text: Mus musculus

text: Mus musculus

text: male


text: Life Sciences Research Unit

text: public

characteristic: Submitter Id

text: ST2 differentiated in osteoblasts

text: house mouse

text: ChIP DNA for ST2 cells differentiated into osteoblasts for 9 days

text: Mus musculus

text: Mus musculus

text: male


text: Hospital Universitari de Bellvitge

text: public

tag: Namespace:Hospital Universitari de Bellvitge

text: Jordi Càmara

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Enterococcus faecalis

characteristic: organism

text: Enterococcus faecalis

text: Enterococcus faecalis_optrA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Hospital Universitari de Bellvitge

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Jordi Càmara

text: No

text: Spain

text: healthy

text: Homo sapiens

text: No

text: Enterococcus faecalis

text: Enterococcus faecalis

text: Enterococcus faecalis_optrA

characteristic: title


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:ISTITUTO ZOOPROFILATTICO SPERIMENTALE DELLE VENEZIE

characteristic: Submitter Id

characteristic: collection date

text: Italy

text: not provided

text: Sus

text: Salmonella enterica subsp. Enterica 4,[5],12:i:-

text: Pig Meat

characteristic: isolation source

text: Salmonella enterica subsp. enterica

text: Salmonella enterica subsp. enterica

characteristic: serovar


text: ISTITUTO ZOOPROFILATTICO SPERIMENTALE DELLE VENEZIE

text: public

text: Italy

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: host health state

text: G.�gallus

characteristic: host scientific name

text: Chicken Meat

text: Salmonella enterica subsp. enterica

text: Salmonella enterica subsp. enterica


characteristic: ENA-CHECKLIST

text: public

text: Italy

text: not provided

text: Sus

characteristic: isolate

text: Pig Meat

text: Salmonella enterica subsp. enterica

characteristic: organism

text: Salmonella enterica subsp. enterica


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Italy

text: not provided

text: Sus

text: Pig Feaces

text: Salmonella enterica subsp. enterica

text: Salmonella enterica subsp. enterica


characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Italy

text: not provided

text: Bos

text: Cow Meat

text: Salmonella enterica subsp. enterica

text: Salmonella enterica subsp. enterica

characteristic: title


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Italy

text: not provided

text: G.�gallus

text: Chicken Feaces

text: Salmonella enterica subsp. enterica

text: Salmonella enterica subsp. enterica


text: public

characteristic: Submitter Id

characteristic: collection date

text: Italy

text: not provided

text: Bos

text: Cow Feaces

characteristic: isolation source

text: Salmonella enterica subsp. enterica

text: Salmonella enterica subsp. enterica


text: public

text: Italy

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: host health state

text: Meleagris

text: Turkey faeces

text: Salmonella enterica subsp. enterica

text: Salmonella enterica subsp. enterica

characteristic: serovar


characteristic: ENA-CHECKLIST

text: public

text: Italy

text: not provided

text: Bos

characteristic: host scientific name

text: Salmonella enterica subsp. Enterica serovar Typhimurium inconsistent variant

characteristic: isolate

text: Cow Organs

text: Salmonella enterica subsp. enterica

text: Salmonella enterica subsp. enterica


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: Italy

text: not provided

text: Sus

text: Pig Meat

text: Salmonella enterica subsp. enterica

characteristic: organism

text: Salmonella enterica subsp. enterica


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Italy

text: not provided

text: Sus

text: Pig Swab

text: Salmonella enterica subsp. enterica

text: Salmonella enterica subsp. enterica


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Italy

text: not provided

text: Bos

text: Cow Faeces

text: Salmonella enterica subsp. enterica

text: Salmonella enterica subsp. enterica

characteristic: title


text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Italy

text: not provided

text: Gallus

text: Poultry feces

text: Salmonella enterica subsp. enterica

text: Salmonella enterica subsp. enterica


text: public

text: Italy

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: host health state

text: Sus

text: Carcass Sponge

characteristic: isolation source

text: Salmonella enterica subsp. enterica

text: Salmonella enterica subsp. enterica


characteristic: ENA-CHECKLIST

text: public

text: Italy

text: not provided

text: Sus

characteristic: host scientific name

text: Fresh Cured Meat

text: Salmonella enterica subsp. enterica

text: Salmonella enterica subsp. enterica

characteristic: serovar


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: Italy

text: not provided

text: Sus

characteristic: isolate

text: Bacterial Strain

text: Salmonella enterica subsp. enterica

text: Salmonella enterica subsp. enterica


characteristic: External Id

characteristic: INSDC center name

text: public

text: Italy

text: not provided

text: Sus

text: Aged Cured Meat

text: Salmonella enterica subsp. enterica

characteristic: organism

text: Salmonella enterica subsp. enterica


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Italy

text: not provided

text: Sus

text: Pig Mechanically Separated Meat

text: Salmonella enterica subsp. enterica

text: Salmonella enterica subsp. enterica


text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Italy

text: not provided

text: Sus

text: Pig Meat Based Product

text: Salmonella enterica subsp. enterica

text: Salmonella enterica subsp. enterica

characteristic: title


text: public

characteristic: collection date

text: Italy

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: host health state

text: Ardea�

text: Bacterial Strain

text: Salmonella enterica subsp. enterica

text: Salmonella enterica subsp. enterica


characteristic: ENA-CHECKLIST

text: public

text: Italy

text: not provided

text: Bos

characteristic: host scientific name

text: Bacterial Strain

characteristic: isolation source

text: Salmonella enterica subsp. enterica

text: Salmonella enterica subsp. enterica


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: Italy

text: not provided

text: H.�sapiens

text: Bacterial Strain

text: Salmonella enterica subsp. enterica

text: Salmonella enterica subsp. enterica

characteristic: serovar


characteristic: External Id

characteristic: INSDC center name

text: public

text: Italy

text: not provided

text: Sus

characteristic: isolate

text: Bacterial Strain

text: Salmonella enterica subsp. enterica

text: Salmonella enterica subsp. enterica


characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Italy

text: not provided

text: Bacterial Strain

text: Salmonella enterica subsp. enterica

characteristic: organism

text: Salmonella enterica subsp. enterica


text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Italy

text: not provided

text: Meleagris

text: Bacterial Strain

text: Salmonella enterica subsp. enterica

text: Salmonella enterica subsp. enterica


Feces, T0, Caloric restricted 1

text: GUH

text: public

text: Feces, T0, Caloric restricted 1

characteristic: collection date

text: terrestrial biome

characteristic: environment (biome)

text: organic feature

characteristic: environment (feature)

text: organic material

characteristic: environment (material)

text: Switzerland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: metagenome

text: Microbiota of caloric restricted mice by 16S

characteristic: project name

text: metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: Feces, T0, Caloric restricted 1

characteristic: title


Feces, T0, Caloric restricted 2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GUH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Feces, T0, Caloric restricted 2

text: terrestrial biome

text: organic feature

text: organic material

text: Switzerland

text: host-associated

text: metagenome

text: metagenome

text: metagenome

text: Illumina MiSeq

text: Feces, T0, Caloric restricted 2


Feces, T0, Caloric restricted 3

text: GUH

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Feces, T0, Caloric restricted 3

characteristic: Submitter Id

characteristic: collection date

text: terrestrial biome

characteristic: environment (biome)

text: organic feature

characteristic: environment (feature)

text: organic material

text: Switzerland

text: host-associated

text: metagenome

text: metagenome

characteristic: organism

text: metagenome

text: Illumina MiSeq

text: Feces, T0, Caloric restricted 3


Feces, T0, Caloric restricted 4

text: GUH

text: public

text: Feces, T0, Caloric restricted 4

text: terrestrial biome

text: organic feature

text: organic material

characteristic: environment (material)

text: Switzerland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: metagenome

characteristic: project name

text: metagenome

text: Illumina MiSeq

text: Feces, T0, Caloric restricted 4


Feces, T0, Caloric restricted 5

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GUH

characteristic: INSDC center name

text: public

text: Feces, T0, Caloric restricted 5

text: terrestrial biome

text: organic feature

text: organic material

text: Switzerland

text: host-associated

text: metagenome

text: metagenome

text: metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: Feces, T0, Caloric restricted 5

characteristic: title


Feces, T0, Caloric restricted 6

text: GUH

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Feces, T0, Caloric restricted 6

characteristic: Submitter Id

characteristic: collection date

text: terrestrial biome

characteristic: environment (biome)

text: organic feature

text: organic material

text: Switzerland

text: host-associated

text: metagenome

text: metagenome

text: metagenome

text: Illumina MiSeq

text: Feces, T0, Caloric restricted 6


Feces, T3 weeks, Caloric restricted 1

text: GUH

text: public

text: Feces, T3 weeks, Caloric restricted 1

text: terrestrial biome

text: organic feature

characteristic: environment (feature)

text: organic material

characteristic: environment (material)

text: Switzerland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

text: metagenome

characteristic: organism

text: metagenome

text: Illumina MiSeq

text: Feces, T3 weeks, Caloric restricted 1


Feces, T3 weeks, Caloric restricted 2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GUH

characteristic: INSDC center name

text: public

text: Feces, T3 weeks, Caloric restricted 2

text: terrestrial biome

text: organic feature

text: organic material

text: Switzerland

text: host-associated

text: metagenome

characteristic: investigation type

text: metagenome

characteristic: project name

text: metagenome

text: Illumina MiSeq

text: Feces, T3 weeks, Caloric restricted 2