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text: Characterization of gut microbes in mice on soybean oil diets. Mice were fed either a 16% by calorie soybean oil diet (LF) or 44% by calorie soybean oil diet (HF) at weaning. After 10 weeks, the mice were gavaged with PBS/saline, linoleic acid (18:2), or alpha-linolenic acid (18:3). 1.5 hours later, the mice were sacrificed and small intestine contents were removed for sampling. In one set of mice (set 2), the small intestine contents were split in half and one aliquot was treated with PMA. Pour order refers to which aliquot received PMA.

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text: 16S rRNA gene sequencing of mouse gut microbiome on soybean oil diets

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text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

characteristic: litter

characteristic: miseq run

characteristic: mouse

characteristic: mouse set

text: AGGCTAGCAGAG

characteristic: multiplex identifiers

text: Mus musculus

characteristic: pcr concentration (ng/ul)

text: no

characteristic: pma

characteristic: pour order (for pma samples)

text: Linoleic acid resistant Lactobacilli

text: Mus musculus

characteristic: sequence counts

text: Illumina MiSeq 2x250 bp

characteristic: starting weight (grams)

characteristic: study

text: 16S rRNA V4 region

characteristic: target gene

text: Jax

characteristic: vendor


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

characteristic: environment (feature)

text: material entity in digestive tract

characteristic: environment (material)

characteristic: fat pad weight (grams)

text: NaCl

characteristic: gavage

text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Jejunum

characteristic: host body site

text: mouse

characteristic: host common name

text: LF

characteristic: host diet

text: male

characteristic: host sex

characteristic: host subject id

text: host-associated

text: metagenome

text: GGAATTATCGGT

text: Mus musculus

characteristic: organism

text: yes

text: Linoleic acid resistant Lactobacilli

characteristic: project name

text: Mus musculus

text: Illumina MiSeq 2x250 bp

characteristic: sequencing method

text: 16S rRNA V4 region

characteristic: title

text: Jax


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

text: material entity in digestive tract

text: USA

text: 42.4534° N

text: 76.4735° W

text: Jejunum

text: mouse

text: LF

text: male

characteristic: host total mass

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

characteristic: litter

characteristic: miseq run

characteristic: mouse

characteristic: mouse set

text: GTGTGCTAACGT

characteristic: multiplex identifiers

text: Mus musculus

characteristic: pcr concentration (ng/ul)

text: yes

characteristic: pma

characteristic: pour order (for pma samples)

text: Linoleic acid resistant Lactobacilli

text: Mus musculus

characteristic: sequence counts

text: Illumina MiSeq 2x250 bp

characteristic: starting weight (grams)

characteristic: study

text: 16S rRNA V4 region

characteristic: target gene

text: Jax

characteristic: vendor


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

characteristic: environment (feature)

text: material entity in digestive tract

characteristic: environment (material)

characteristic: fat pad weight (grams)

characteristic: gavage

text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Jejunum

characteristic: host body site

text: mouse

characteristic: host common name

text: LF

characteristic: host diet

text: male

characteristic: host sex

characteristic: host subject id

text: host-associated

text: metagenome

text: CCGACTCTAGGT

text: Mus musculus

characteristic: organism

text: yes

text: Linoleic acid resistant Lactobacilli

characteristic: project name

text: Mus musculus

text: Illumina MiSeq 2x250 bp

characteristic: sequencing method

text: 16S rRNA V4 region

characteristic: title

text: Jax


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

text: material entity in digestive tract

text: USA

text: 42.4534° N

text: 76.4735° W

text: Jejunum

text: mouse

text: HF

text: male

characteristic: host total mass

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

characteristic: litter

characteristic: miseq run

characteristic: mouse

characteristic: mouse set

text: CCACCCAGTAAC

characteristic: multiplex identifiers

text: Mus musculus

text: PCRconcentration

characteristic: pcr concentration (ng/ul)

text: yes

characteristic: pma

characteristic: pour order (for pma samples)

text: Linoleic acid resistant Lactobacilli

text: Mus musculus

characteristic: sequence counts

text: Illumina MiSeq 2x250 bp

characteristic: starting weight (grams)

characteristic: study

text: 16S rRNA V4 region

characteristic: target gene

text: Jax

characteristic: vendor


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

characteristic: environment (feature)

text: material entity in digestive tract

characteristic: environment (material)

characteristic: fat pad weight (grams)

text: NaCl

characteristic: gavage

text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Jejunum

characteristic: host body site

text: mouse

characteristic: host common name

text: HF

characteristic: host diet

text: male

characteristic: host sex

characteristic: host subject id

text: host-associated

text: metagenome

text: GATGACCCAAAT

text: Mus musculus

characteristic: organism

text: yes

text: Linoleic acid resistant Lactobacilli

characteristic: project name

text: Mus musculus

text: Illumina MiSeq 2x250 bp

characteristic: sequencing method

text: 16S rRNA V4 region

characteristic: title

text: Jax


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

text: material entity in digestive tract

text: USA

text: 42.4534° N

text: 76.4735° W

text: Jejunum

text: mouse

text: HF

text: male

characteristic: host total mass

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

characteristic: litter

characteristic: miseq run

characteristic: mouse

characteristic: mouse set

text: TGGAAGAACGGC

characteristic: multiplex identifiers

text: Mus musculus

characteristic: pcr concentration (ng/ul)

text: no

characteristic: pma

characteristic: pour order (for pma samples)

text: Linoleic acid resistant Lactobacilli

text: Mus musculus

characteristic: sequence counts

text: Illumina MiSeq 2x250 bp

characteristic: starting weight (grams)

characteristic: study

text: 16S rRNA V4 region

characteristic: target gene

text: Jax

characteristic: vendor


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

characteristic: environment (feature)

text: material entity in digestive tract

characteristic: environment (material)

characteristic: fat pad weight (grams)

text: NaCl

characteristic: gavage

text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Jejunum

characteristic: host body site

text: mouse

characteristic: host common name

text: HF

characteristic: host diet

text: male

characteristic: host sex

characteristic: host subject id

text: host-associated

text: metagenome

text: TCAGGTTGCCCA

text: Mus musculus

characteristic: organism

text: no

text: Linoleic acid resistant Lactobacilli

characteristic: project name

text: Mus musculus

text: Illumina MiSeq 2x250 bp

characteristic: sequencing method

text: 16S rRNA V4 region

characteristic: title

text: Jax


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

text: material entity in digestive tract

text: USA

text: 42.4534° N

text: 76.4735° W

text: Jejunum

text: mouse

text: HF

text: male

characteristic: host total mass

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

characteristic: litter

characteristic: miseq run

characteristic: mouse

characteristic: mouse set

text: GCTTAGATGTAG

characteristic: multiplex identifiers

text: Mus musculus

characteristic: pcr concentration (ng/ul)

text: yes

characteristic: pma

characteristic: pour order (for pma samples)

text: Linoleic acid resistant Lactobacilli

text: Mus musculus

characteristic: sequence counts

text: Illumina MiSeq 2x250 bp

characteristic: starting weight (grams)

characteristic: study

text: 16S rRNA V4 region

characteristic: target gene

text: Jax

characteristic: vendor


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

characteristic: environment (feature)

text: material entity in digestive tract

characteristic: environment (material)

characteristic: fat pad weight (grams)

text: NaCl

characteristic: gavage

text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Jejunum

characteristic: host body site

text: mouse

characteristic: host common name

text: HF

characteristic: host diet

text: male

characteristic: host sex

characteristic: host subject id

text: host-associated

text: metagenome

text: GGCCTATAAGTC

text: Mus musculus

characteristic: organism

text: no

text: Linoleic acid resistant Lactobacilli

characteristic: project name

text: Mus musculus

text: Illumina MiSeq 2x250 bp

characteristic: sequencing method

text: 16S rRNA V4 region

characteristic: title

text: Jax


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

text: material entity in digestive tract

text: NaCl

text: USA

text: 42.4534° N

text: 76.4735° W

text: Jejunum

text: mouse

text: HF

text: male

characteristic: host total mass

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

characteristic: litter

characteristic: miseq run

characteristic: mouse

characteristic: mouse set

text: TACGCAGCACTA

characteristic: multiplex identifiers

text: Mus musculus

characteristic: pcr concentration (ng/ul)

text: yes

characteristic: pma

characteristic: pour order (for pma samples)

text: Linoleic acid resistant Lactobacilli

text: Mus musculus

characteristic: sequence counts

text: Illumina MiSeq 2x250 bp

characteristic: starting weight (grams)

characteristic: study

text: 16S rRNA V4 region

characteristic: target gene

text: Jax

characteristic: vendor


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

characteristic: environment (feature)

text: material entity in digestive tract

characteristic: environment (material)

characteristic: fat pad weight (grams)

characteristic: gavage

text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Jejunum

characteristic: host body site

text: mouse

characteristic: host common name

text: HF

characteristic: host diet

text: male

characteristic: host sex

characteristic: host subject id

text: host-associated

text: metagenome

text: AGAGAGACAGGT

text: Mus musculus

characteristic: organism

text: no

text: Linoleic acid resistant Lactobacilli

characteristic: project name

text: Mus musculus

text: Illumina MiSeq 2x250 bp

characteristic: sequencing method

text: 16S rRNA V4 region

characteristic: title

text: Jax


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

text: material entity in digestive tract

text: USA

text: 42.4534° N

text: 76.4735° W

text: Jejunum

text: mouse

text: LF

text: male

characteristic: host total mass

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

characteristic: litter

characteristic: miseq run

characteristic: mouse

characteristic: mouse set

text: AGTGGCACTATC

characteristic: multiplex identifiers

text: Mus musculus

characteristic: pcr concentration (ng/ul)

text: no

characteristic: pma

characteristic: pour order (for pma samples)

text: Linoleic acid resistant Lactobacilli

text: Mus musculus

characteristic: sequence counts

text: Illumina MiSeq 2x250 bp

characteristic: starting weight (grams)

characteristic: study

text: 16S rRNA V4 region

characteristic: target gene

text: Jax

characteristic: vendor


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

characteristic: environment (feature)

text: material entity in digestive tract

characteristic: environment (material)

characteristic: fat pad weight (grams)

text: NaCl

characteristic: gavage

text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Jejunum

characteristic: host body site

text: mouse

characteristic: host common name

text: LF

characteristic: host diet

text: male

characteristic: host sex

characteristic: host subject id

text: host-associated

text: metagenome

text: CCGATGCCTTGA

text: Mus musculus

characteristic: organism

text: yes

text: Linoleic acid resistant Lactobacilli

characteristic: project name

text: Mus musculus

text: Illumina MiSeq 2x250 bp

characteristic: sequencing method

text: 16S rRNA V4 region

characteristic: title

text: Jax


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

text: material entity in digestive tract

text: USA

text: 42.4534° N

text: 76.4735° W

text: Jejunum

text: mouse

text: LF

text: male

characteristic: host total mass

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

characteristic: litter

characteristic: miseq run

characteristic: mouse

characteristic: mouse set

text: CGTAGAGCTCTC

characteristic: multiplex identifiers

text: Mus musculus

characteristic: pcr concentration (ng/ul)

text: yes

characteristic: pma

characteristic: pour order (for pma samples)

text: Linoleic acid resistant Lactobacilli

text: Mus musculus

characteristic: sequence counts

text: Illumina MiSeq 2x250 bp

characteristic: starting weight (grams)

characteristic: study

text: 16S rRNA V4 region

characteristic: target gene

text: Jax

characteristic: vendor


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

characteristic: environment (feature)

text: material entity in digestive tract

characteristic: environment (material)

characteristic: fat pad weight (grams)

text: NaCl

characteristic: gavage

text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Jejunum

characteristic: host body site

text: mouse

characteristic: host common name

text: LF

characteristic: host diet

text: male

characteristic: host sex

characteristic: host subject id

text: host-associated

text: metagenome

text: CTCATCATGTTC

text: Mus musculus

characteristic: organism

text: no

text: Linoleic acid resistant Lactobacilli

characteristic: project name

text: Mus musculus

text: Illumina MiSeq 2x250 bp

characteristic: sequencing method

text: 16S rRNA V4 region

characteristic: title

text: Jax


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

text: material entity in digestive tract

text: NaCl

text: USA

text: 42.4534° N

text: 76.4735° W

text: Jejunum

text: mouse

text: LF

text: male

characteristic: host total mass

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

characteristic: litter

characteristic: miseq run

characteristic: mouse

characteristic: mouse set

text: CGCTTAGTGCTG

characteristic: multiplex identifiers

text: Mus musculus

characteristic: pcr concentration (ng/ul)

text: yes

characteristic: pma

characteristic: pour order (for pma samples)

text: Linoleic acid resistant Lactobacilli

text: Mus musculus

characteristic: sequence counts

text: Illumina MiSeq 2x250 bp

characteristic: starting weight (grams)

characteristic: study

text: 16S rRNA V4 region

characteristic: target gene

text: Jax

characteristic: vendor


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

characteristic: environment (feature)

text: material entity in digestive tract

characteristic: environment (material)

characteristic: fat pad weight (grams)

text: NaCl

characteristic: gavage

text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Jejunum

characteristic: host body site

text: mouse

characteristic: host common name

text: LF

characteristic: host diet

text: male

characteristic: host sex

characteristic: host subject id

text: host-associated

text: metagenome

text: TAGCGCGAACTT

text: Mus musculus

characteristic: organism

text: no

text: Linoleic acid resistant Lactobacilli

characteristic: project name

text: Mus musculus

text: Illumina MiSeq 2x250 bp

characteristic: sequencing method

text: 16S rRNA V4 region

characteristic: title

text: Jax


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

text: material entity in digestive tract

text: USA

text: 42.4534° N

text: 76.4735° W

text: Jejunum

text: mouse

text: LF

text: male

characteristic: host total mass

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

characteristic: litter

characteristic: miseq run

characteristic: mouse

characteristic: mouse set

text: TGCTACAGACGT

characteristic: multiplex identifiers

text: Mus musculus

characteristic: pcr concentration (ng/ul)

text: no

characteristic: pma

characteristic: pour order (for pma samples)

text: Linoleic acid resistant Lactobacilli

text: Mus musculus

characteristic: sequence counts

text: Illumina MiSeq 2x250 bp

characteristic: starting weight (grams)

characteristic: study

text: 16S rRNA V4 region

characteristic: target gene

text: Jax

characteristic: vendor


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

characteristic: environment (feature)

text: material entity in digestive tract

characteristic: environment (material)

characteristic: fat pad weight (grams)

characteristic: gavage

text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Jejunum

characteristic: host body site

text: mouse

characteristic: host common name

text: LF

characteristic: host diet

text: male

characteristic: host sex

characteristic: host subject id

text: host-associated

text: metagenome

text: TGAGTGGTCTGT

text: Mus musculus

characteristic: organism

text: yes

text: Linoleic acid resistant Lactobacilli

characteristic: project name

text: Mus musculus

text: Illumina MiSeq 2x250 bp

characteristic: sequencing method

text: 16S rRNA V4 region

characteristic: title

text: Jax


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

text: material entity in digestive tract

text: USA

text: 42.4534° N

text: 76.4735° W

text: Jejunum

text: mouse

text: HF

text: male

characteristic: host total mass

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

characteristic: litter

characteristic: miseq run

characteristic: mouse

characteristic: mouse set

text: TCAACCCGTGAA

characteristic: multiplex identifiers

text: Mus musculus

characteristic: pcr concentration (ng/ul)

text: yes

characteristic: pma

characteristic: pour order (for pma samples)

text: Linoleic acid resistant Lactobacilli

text: Mus musculus

characteristic: sequence counts

text: Illumina MiSeq 2x250 bp

characteristic: starting weight (grams)

characteristic: study

text: 16S rRNA V4 region

characteristic: target gene

text: Jax

characteristic: vendor


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

characteristic: environment (feature)

text: material entity in digestive tract

characteristic: environment (material)

characteristic: fat pad weight (grams)

characteristic: gavage

text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Jejunum

characteristic: host body site

text: mouse

characteristic: host common name

text: HF

characteristic: host diet

text: male

characteristic: host sex

characteristic: host subject id

text: host-associated

text: metagenome

text: CCTCGATGCAGT

text: Mus musculus

characteristic: organism

text: yes

text: Linoleic acid resistant Lactobacilli

characteristic: project name

text: Mus musculus

text: Illumina MiSeq 2x250 bp

characteristic: sequencing method

text: 16S rRNA V4 region

characteristic: title

text: Jax


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

text: material entity in digestive tract

text: USA

text: 42.4534° N

text: 76.4735° W

text: Jejunum

text: mouse

text: HF

text: male

characteristic: host total mass

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

characteristic: litter

characteristic: miseq run

characteristic: mouse

characteristic: mouse set

text: AACTGTTCGCGC

characteristic: multiplex identifiers

text: Mus musculus

characteristic: pcr concentration (ng/ul)

text: no

characteristic: pma

characteristic: pour order (for pma samples)

text: Linoleic acid resistant Lactobacilli

text: Mus musculus

characteristic: sequence counts

text: Illumina MiSeq 2x250 bp

characteristic: starting weight (grams)

characteristic: study

text: 16S rRNA V4 region

characteristic: target gene

text: Jax

characteristic: vendor


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

characteristic: environment (feature)

text: material entity in digestive tract

characteristic: environment (material)

characteristic: fat pad weight (grams)

text: NaCl

characteristic: gavage

text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Jejunum

characteristic: host body site

text: mouse

characteristic: host common name

text: HF

characteristic: host diet

text: male

characteristic: host sex

characteristic: host subject id

text: host-associated

text: metagenome

text: GAACCTATGACA

text: Mus musculus

characteristic: organism

text: no

text: Linoleic acid resistant Lactobacilli

characteristic: project name

text: Mus musculus

text: Illumina MiSeq 2x250 bp

characteristic: sequencing method

text: 16S rRNA V4 region

characteristic: title

text: Jax


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

text: material entity in digestive tract

text: NaCl

text: USA

text: 42.4534° N

text: 76.4735° W

text: Jejunum

text: mouse

text: HF

text: male

characteristic: host total mass

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

characteristic: litter

characteristic: miseq run

characteristic: mouse

characteristic: mouse set

text: CAATCGGCTTGC

characteristic: multiplex identifiers

text: Mus musculus

characteristic: pcr concentration (ng/ul)

text: no

characteristic: pma

characteristic: pour order (for pma samples)

text: Linoleic acid resistant Lactobacilli

text: Mus musculus

characteristic: sequence counts

text: Illumina MiSeq 2x250 bp

characteristic: starting weight (grams)

characteristic: study

text: 16S rRNA V4 region

characteristic: target gene

text: Jax

characteristic: vendor


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

characteristic: environment (feature)

text: material entity in digestive tract

characteristic: environment (material)

characteristic: fat pad weight (grams)

text: NaCl

characteristic: gavage

text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Jejunum

characteristic: host body site

text: mouse

characteristic: host common name

text: HF

characteristic: host diet

text: male

characteristic: host sex

characteristic: host subject id

text: host-associated

text: metagenome

text: TTACCGACGAGT

text: Mus musculus

characteristic: organism

text: yes

text: Linoleic acid resistant Lactobacilli

characteristic: project name

text: Mus musculus

text: Illumina MiSeq 2x250 bp

characteristic: sequencing method

text: 16S rRNA V4 region

characteristic: title

text: Jax


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

text: material entity in digestive tract

text: USA

text: 42.4534° N

text: 76.4735° W

text: Jejunum

text: mouse

text: HF

text: male

characteristic: host total mass

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

characteristic: litter

characteristic: miseq run

characteristic: mouse

characteristic: mouse set

text: GTCATGCTCCAG

characteristic: multiplex identifiers

text: Mus musculus

characteristic: pcr concentration (ng/ul)

text: no

characteristic: pma

characteristic: pour order (for pma samples)

text: Linoleic acid resistant Lactobacilli

text: Mus musculus

characteristic: sequence counts

text: Illumina MiSeq 2x250 bp

characteristic: starting weight (grams)

characteristic: study

text: 16S rRNA V4 region

characteristic: target gene

text: Jax

characteristic: vendor


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

characteristic: environment (feature)

text: material entity in digestive tract

characteristic: environment (material)

characteristic: fat pad weight (grams)

text: NaCl

characteristic: gavage

text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Jejunum

characteristic: host body site

text: mouse

characteristic: host common name

text: HF

characteristic: host diet

text: male

characteristic: host sex

characteristic: host subject id

text: host-associated

text: metagenome

text: GTAGACATGTGT

text: Mus musculus

characteristic: organism

text: yes

text: Linoleic acid resistant Lactobacilli

characteristic: project name

text: Mus musculus

text: Illumina MiSeq 2x250 bp

characteristic: sequencing method

text: 16S rRNA V4 region

characteristic: title

text: Jax


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

text: material entity in digestive tract

text: USA

text: 42.4534° N

text: 76.4735° W

text: Jejunum

text: mouse

text: HF

text: male

characteristic: host total mass

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

characteristic: litter

characteristic: miseq run

characteristic: mouse

characteristic: mouse set

text: TCGGATCTGTGA

characteristic: multiplex identifiers

text: Mus musculus

characteristic: pcr concentration (ng/ul)

text: yes

characteristic: pma

characteristic: pour order (for pma samples)

text: Linoleic acid resistant Lactobacilli

text: Mus musculus

characteristic: sequence counts

text: Illumina MiSeq 2x250 bp

characteristic: starting weight (grams)

characteristic: study

text: 16S rRNA V4 region

characteristic: target gene

text: Jax

characteristic: vendor


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

characteristic: environment (feature)

text: material entity in digestive tract

characteristic: environment (material)

characteristic: fat pad weight (grams)

text: NaCl

characteristic: gavage

text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Jejunum

characteristic: host body site

text: mouse

characteristic: host common name

text: HF

characteristic: host diet

text: male

characteristic: host sex

characteristic: host subject id

text: host-associated

text: metagenome

text: GTTTGAAACACG

text: Mus musculus

characteristic: organism

text: yes

text: Linoleic acid resistant Lactobacilli

characteristic: project name

text: Mus musculus

text: Illumina MiSeq 2x250 bp

characteristic: sequencing method

text: 16S rRNA V4 region

characteristic: title

text: Jax


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

text: material entity in digestive tract

text: USA

text: 42.4534° N

text: 76.4735° W

text: Jejunum

text: mouse

text: HF

text: male

characteristic: host total mass

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

characteristic: litter

characteristic: miseq run

characteristic: mouse

characteristic: mouse set

text: GTCCGCAAGTTA

characteristic: multiplex identifiers

text: Mus musculus

characteristic: pcr concentration (ng/ul)

text: no

characteristic: pma

characteristic: pour order (for pma samples)

text: Linoleic acid resistant Lactobacilli

text: Mus musculus

characteristic: sequence counts

text: Illumina MiSeq 2x250 bp

characteristic: starting weight (grams)

characteristic: study

text: 16S rRNA V4 region

characteristic: target gene

text: Jax

characteristic: vendor


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

characteristic: environment (feature)

text: material entity in digestive tract

characteristic: environment (material)

characteristic: fat pad weight (grams)

text: NaCl

characteristic: gavage

text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Jejunum

characteristic: host body site

text: mouse

characteristic: host common name

text: HF

characteristic: host diet

text: male

characteristic: host sex

characteristic: host subject id

text: host-associated

text: metagenome

text: CTTCCCTAACTC

text: Mus musculus

characteristic: organism

text: yes

text: Linoleic acid resistant Lactobacilli

characteristic: project name

text: Mus musculus

text: Illumina MiSeq 2x250 bp

characteristic: sequencing method

text: 16S rRNA V4 region

characteristic: title

text: Jax


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

text: material entity in digestive tract

text: USA

text: 42.4534° N

text: 76.4735° W

text: Jejunum

text: mouse

text: HF

text: male

characteristic: host total mass

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

characteristic: litter

characteristic: miseq run

characteristic: mouse

characteristic: mouse set

text: CACTTTGGGTGC

characteristic: multiplex identifiers

text: Mus musculus

characteristic: pcr concentration (ng/ul)

text: no

characteristic: pma

characteristic: pour order (for pma samples)

text: Linoleic acid resistant Lactobacilli

text: Mus musculus

characteristic: sequence counts

text: Illumina MiSeq 2x250 bp

characteristic: starting weight (grams)

characteristic: study

text: 16S rRNA V4 region

characteristic: target gene

text: Jax

characteristic: vendor


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

characteristic: environment (feature)

text: material entity in digestive tract

characteristic: environment (material)

characteristic: fat pad weight (grams)

text: NaCl

characteristic: gavage

text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Jejunum

characteristic: host body site

text: mouse

characteristic: host common name

text: HF

characteristic: host diet

text: male

characteristic: host sex

characteristic: host subject id

text: host-associated

text: metagenome

text: CGAGGTTCTGAT

text: Mus musculus

characteristic: organism

text: no

text: Linoleic acid resistant Lactobacilli

characteristic: project name

text: Mus musculus

text: Illumina MiSeq 2x250 bp

characteristic: sequencing method

text: 16S rRNA V4 region

characteristic: title

text: Jax


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

text: material entity in digestive tract

text: USA

text: 42.4534° N

text: 76.4735° W

text: Jejunum

text: mouse

text: HF

text: male

characteristic: host total mass

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

characteristic: litter

characteristic: miseq run

characteristic: mouse

characteristic: mouse set

text: TCATTCCACTCA

characteristic: multiplex identifiers

text: Mus musculus

characteristic: pcr concentration (ng/ul)

text: yes

characteristic: pma

characteristic: pour order (for pma samples)

text: Linoleic acid resistant Lactobacilli

text: Mus musculus

characteristic: sequence counts

text: Illumina MiSeq 2x250 bp

characteristic: starting weight (grams)

characteristic: study

text: 16S rRNA V4 region

characteristic: target gene

text: Jax

characteristic: vendor


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

characteristic: environment (feature)

text: material entity in digestive tract

characteristic: environment (material)

characteristic: fat pad weight (grams)

text: NaCl

characteristic: gavage

text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Jejunum

characteristic: host body site

text: mouse

characteristic: host common name

text: HF

characteristic: host diet

text: male

characteristic: host sex

characteristic: host subject id

text: host-associated

text: metagenome

text: GATAGCACTCGT

text: Mus musculus

characteristic: organism

text: no

text: Linoleic acid resistant Lactobacilli

characteristic: project name

text: Mus musculus

text: Illumina MiSeq 2x250 bp

characteristic: sequencing method

text: 16S rRNA V4 region

characteristic: title

text: Jax


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

text: material entity in digestive tract

text: NaCl

text: USA

text: 42.4534° N

text: 76.4735° W

text: Jejunum

text: mouse

text: LF

text: male

characteristic: host total mass

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

characteristic: litter

characteristic: miseq run

characteristic: mouse

characteristic: mouse set

text: AACTTCACTTCC

characteristic: multiplex identifiers

text: Mus musculus

text: PCRconcentration

characteristic: pcr concentration (ng/ul)

text: no

characteristic: pma

characteristic: pour order (for pma samples)

text: Linoleic acid resistant Lactobacilli

text: Mus musculus

characteristic: sequence counts

text: Illumina MiSeq 2x250 bp

characteristic: starting weight (grams)

characteristic: study

text: 16S rRNA V4 region

characteristic: target gene

text: Jax

characteristic: vendor


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

characteristic: environment (feature)

text: material entity in digestive tract

characteristic: environment (material)

characteristic: fat pad weight (grams)

characteristic: gavage

text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Jejunum

characteristic: host body site

text: mouse

characteristic: host common name

text: LF

characteristic: host diet

text: male

characteristic: host sex

characteristic: host subject id

text: host-associated

text: metagenome

text: TCGACCAAACAC

text: Mus musculus

characteristic: organism

text: yes

text: Linoleic acid resistant Lactobacilli

characteristic: project name

text: Mus musculus

text: Illumina MiSeq 2x250 bp

characteristic: sequencing method

text: 16S rRNA V4 region

characteristic: title

text: Jax


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

text: material entity in digestive tract

text: USA

text: 42.4534° N

text: 76.4735° W

text: Jejunum

text: mouse

text: LF

text: male

characteristic: host total mass

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

characteristic: litter

characteristic: miseq run

characteristic: mouse

characteristic: mouse set

text: CACGTGACATGT

characteristic: multiplex identifiers

text: Mus musculus

characteristic: pcr concentration (ng/ul)

text: yes

characteristic: pma

characteristic: pour order (for pma samples)

text: Linoleic acid resistant Lactobacilli

text: Mus musculus

characteristic: sequence counts

text: Illumina MiSeq 2x250 bp

characteristic: starting weight (grams)

characteristic: study

text: 16S rRNA V4 region

characteristic: target gene

text: Jax

characteristic: vendor


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

characteristic: environment (feature)

text: material entity in digestive tract

characteristic: environment (material)

characteristic: fat pad weight (grams)

characteristic: gavage

text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Jejunum

characteristic: host body site

text: mouse

characteristic: host common name

text: LF

characteristic: host diet

text: male

characteristic: host sex

characteristic: host subject id

text: host-associated

text: metagenome

text: AACACTCGATCG

text: Mus musculus

characteristic: organism

text: no

text: Linoleic acid resistant Lactobacilli

characteristic: project name

text: Mus musculus

text: Illumina MiSeq 2x250 bp

characteristic: sequencing method

text: 16S rRNA V4 region

characteristic: title

text: Jax


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

text: material entity in digestive tract

text: NaCl

text: USA

text: 42.4534° N

text: 76.4735° W

text: Jejunum

text: mouse

text: LF

text: male

characteristic: host total mass

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

characteristic: litter

characteristic: miseq run

characteristic: mouse

characteristic: mouse set

text: CTCTCTCACTTG

characteristic: multiplex identifiers

text: Mus musculus

characteristic: pcr concentration (ng/ul)

text: no

characteristic: pma

characteristic: pour order (for pma samples)

text: Linoleic acid resistant Lactobacilli

text: Mus musculus

characteristic: sequence counts

text: Illumina MiSeq 2x250 bp

characteristic: starting weight (grams)

characteristic: study

text: 16S rRNA V4 region

characteristic: target gene

text: Jax

characteristic: vendor


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

characteristic: environment (feature)

text: material entity in digestive tract

characteristic: environment (material)

characteristic: fat pad weight (grams)

text: NaCl

characteristic: gavage

text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Jejunum

characteristic: host body site

text: mouse

characteristic: host common name

text: LF

characteristic: host diet

text: male

characteristic: host sex

characteristic: host subject id

text: host-associated

text: metagenome

text: GACAACGAATCT

text: Mus musculus

characteristic: organism

text: yes

text: Linoleic acid resistant Lactobacilli

characteristic: project name

text: Mus musculus

text: Illumina MiSeq 2x250 bp

characteristic: sequencing method

text: 16S rRNA V4 region

characteristic: title

text: Jax


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

text: material entity in digestive tract

text: USA

text: 42.4534° N

text: 76.4735° W

text: Jejunum

text: mouse

text: LF

text: male

characteristic: host total mass

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

characteristic: litter

characteristic: miseq run

characteristic: mouse

characteristic: mouse set

text: TGTGTTACTCCT

characteristic: multiplex identifiers

text: Mus musculus

characteristic: pcr concentration (ng/ul)

text: no

characteristic: pma

characteristic: pour order (for pma samples)

text: Linoleic acid resistant Lactobacilli

text: Mus musculus

characteristic: sequence counts

text: Illumina MiSeq 2x250 bp

characteristic: starting weight (grams)

characteristic: study

text: 16S rRNA V4 region

characteristic: target gene

text: Jax

characteristic: vendor


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age (days)

characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extracted total (ng)

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: jejunum

characteristic: environment (feature)

text: material entity in digestive tract

characteristic: environment (material)

characteristic: fat pad weight (grams)

text: NaCl

characteristic: gavage

text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Jejunum

characteristic: host body site

text: mouse

characteristic: host common name

text: LF

characteristic: host diet

text: male

characteristic: host sex

characteristic: host subject id

text: host-associated

text: metagenome

text: ACAAGAACCTTG

text: Mus musculus

characteristic: organism

text: yes

text: Linoleic acid resistant Lactobacilli

characteristic: project name

text: Mus musculus

text: Illumina MiSeq 2x250 bp

characteristic: sequencing method

text: 16S rRNA V4 region

characteristic: title

text: Jax


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA GRIGNON

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:INRA GRIGNON

characteristic: Submitter Id

text: We report here the genome sequence of Brevibacterium antiquum P10, isolated from cheese. Sequencing was performed using Illumina MiSeq technology.

characteristic: description

text: Brevibacterium antiquum

text: Brevibacterium antiquum

characteristic: strain

text: Draft genome sequence of Brevibacterium antiquum P10