Kocuria Marina TRE1509021

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: Kocuria Marina TRE1509021

tag: Namespace:Tropical Infectious Diseases Research and Education Centre

characteristic: collection date

text: Kocuria Marina TRE150902

text: Malaysia

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: host health state

text: Rattus rattus diardii

characteristic: host scientific name

text: Kocuria Marina TRE150902

characteristic: isolate

text: Rat

characteristic: isolation source

text: Kocuria marina

text: Kocuria marina

text: Kocuria Marina TRE150902


status: PUBLIC

tag: attribute

text: Tropical Infectious Diseases Research and Education Centre

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: University Malaya Medical Centre

characteristic: collecting institution

characteristic: description

text: Malaysia

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

unit: centuries

characteristic: host age

text: Human

characteristic: host common name

text: Homo sapiens

characteristic: host subject id

text: Dengue virus 3

characteristic: organism

characteristic: receipt date

text: active surveillance not initiated by an outbreak

characteristic: sample capture status

text: Dengue virus 3

characteristic: title

characteristic: virus identifier


BTB 08-75-lux

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Kalmar county hospital

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: BTB 08-75-lux

tag: Namespace:Kalmar county hospital

text: IonXpress_024_rawlib.basecaller.bam [XTB 16-231] (single) (single) trimmed (Reads)

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis


BTB 08-76-lux

text: Kalmar county hospital

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: BTB 08-76-lux

characteristic: Submitter Id

text: IonXpress_025_rawlib.basecaller.bam [XTB 16-232] (single) (single) trimmed (Reads)

characteristic: description

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis


text: Kalmar county hospital

text: public

text: IonXpress_026_rawlib.basecaller.bam [XTB 16-233] (single) (single) trimmed (Reads)

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis


text: Kalmar county hospital

text: public

text: IonXpress_027_rawlib.basecaller.bam [XTB 16-234] (single) (single) trimmed (Reads)

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis


BTB 02-134-lux

text: Kalmar county hospital

text: public

text: BTB 02-134-lux

text: IonXpress_028_rawlib.basecaller.bam [XTB 16-235] (single) (single) trimmed (Reads)

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis


BTB 02-141-lux

text: Kalmar county hospital

text: public

text: BTB 02-141-lux

text: IonXpress_029_rawlib.basecaller.bam [XTB 16-236] (single) (single) trimmed (Reads)

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis


text: Kalmar county hospital

text: public

text: IonXpress_030_rawlib.basecaller.bam [XTB 16-237] (single) (single) trimmed (Reads)

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis


text: Kalmar county hospital

text: public

text: IonXpress_031_rawlib.basecaller.bam [XTB 16-238] (single) (single) trimmed (Reads)

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis


CDC 1551-lux

text: Kalmar county hospital

text: public

text: CDC 1551-lux

text: IonXpress_033_rawlib.basecaller.bam [XTB 16-239] (single) (single) trimmed (Reads)

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis


Wild type MG1665 exponential

text: public

text: Wild type MG1665 exponential

tag: Namespace:Division of Biosciences, Brunel University

text: Wild type exponential sample

text: Escherichia coli str. K-12 substr. MG1655

text: oriC+ oriZ rep samples

type: has member


Wild type MG1655 stationary

text: Division of Biosciences, Brunel University

text: public

text: Wild type MG1655 stationary

text: Wild type stationary sample

text: oriC+ oriZ rep samples


oriC+ oriZ rep

text: public

text: oriC+ oriZ rep

text: oriC+ oriZ rep exponential sample

text: oriC+ oriZ rep samples


oriC+ oriZ dinG

text: public

text: oriC+ oriZ dinG

text: oriC+ oriZ dinG exponential sample

text: oriC+ oriZ rep samples


oriC+ oriZ

text: public

text: oriC+ oriZ

text: oriC+ oriZ exponential sample

text: oriC+ oriZ rep samples


oriC+ oriZ rep rpoB*35

text: public

text: oriC+ oriZ rep rpoB*35

text: oriC+ oriZ rpo* exponential sample

text: oriC+ oriZ rep samples


text: URMITE

text: public

text: Kocuria sp. Marseille-P3598

text: Kocuria sp. Marseille-P3598

characteristic: strain

text: Kocuria massiliensis genome


text: URMITE

text: public

text: Pseudoflavonifractor sp. Marseille-P3106

characteristic: organism

text: Pseudoflavonifractor caccae genome


name: E-MTAB-5482:mouse single cells from E14 ES cell line

text: Wellcome Trust Sanger Institute

text: public

tag: Namespace:Wellcome Trust Sanger Institute

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: mouse embryonic stem cell

characteristic: cell type

text: house mouse

characteristic: common name

text: Protocols: Wildtype E14 mESC were cultured under standard culture conditions in Knockout DMEM containing 15% Fetal Calf Serum, 1x Penicillin-Streptomycin-Glutamine, 1x NEAA 2-mercaptoethanol and 1000U Leukemia Inhibitory Factor. Trypisnised single mESC suspension is passed through 30micron filter to remove and clumps. Scripts with different method workflows were downloaded from Fluidigm Script Hub. Approx 3000 single mESC are loaded onto 5-10 micron Fluidigm C1 Single-Cell Auto Prep IFC and cell capture was performed as per manufacturers protocol. Two kinds of spike-ins (ERCC-#4456740 and SIRV-E2 #SKU025.03) were mixed (0.5ul 1:500 diluted ERCCs + 0.6ul 1:500 diluted SIRVs) and added to respective Lysis buffer. The subsequent steps are performed as per manufacturers protocol or described on Fluidigm Script hub. The STRT-Seq libraries were made and sequenced as previously described by Islam et al and Zeisel et al.

text: Serum + LIF condition

characteristic: growth condition

text: Mus musculus

text: Mus musculus

text: Mus musculus


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: MPI-EVA

text: public

text: sediment metagenome

text: Shotgun library

text: Caune de l'Arago (France)

characteristic: geographic location (region and locality)

text: sediment metagenome

text: sediment metagenome

characteristic: specimen voucher

text: Sediment from archaeological site

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPI-EVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: sediment metagenome

text: Shotgun library

text: Chagyrskaya Cave (Russia)

text: sediment metagenome

text: sediment metagenome

text: Sediment from archaeological site


text: MPI-EVA

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: sediment metagenome

text: Shotgun library

characteristic: description

text: Denisova Cave (Russia) East Gallery

text: sediment metagenome

text: sediment metagenome

text: Sediment from archaeological site


text: MPI-EVA

text: public

text: sediment metagenome

text: Shotgun library

text: Denisova Cave (Russia) Main Gallery

text: sediment metagenome

characteristic: organism

text: sediment metagenome

text: Sediment from archaeological site


text: MPI-EVA

text: public

text: sediment metagenome

characteristic: common name

text: Shotgun library

text: Les Cott�s (France)

text: sediment metagenome

text: sediment metagenome

text: Sediment from archaeological site


text: MPI-EVA

text: public

text: sediment metagenome

text: Shotgun library

text: Trou Al'Wesse (Belgium)

text: sediment metagenome

text: sediment metagenome

text: Sediment from archaeological site


text: MPI-EVA

text: public

text: sediment metagenome

text: Shotgun library

text: Vindija Cave (Croatia)

text: sediment metagenome

text: sediment metagenome

text: Sediment from archaeological site


text: MPI-EVA

text: public

text: sediment metagenome

text: Shotgun library

text: El Sidr�n (Spain)

text: sediment metagenome

text: sediment metagenome

text: Sediment from archaeological site


text: MPI-EVA

text: public

text: sediment metagenome

text: Shotgun library

text: sediment metagenome

text: sediment metagenome

text: Extraction negative control

text: Sediment from archaeological site


text: MPI-EVA

text: public

text: sediment metagenome

text: Shotgun library

text: sediment metagenome

text: sediment metagenome

text: Library preparation negative control

text: Sediment from archaeological site


text: MPI-EVA

text: public

text: sediment metagenome

text: Captured library mammalian MT

text: Caune de l'Arago (France)

text: sediment metagenome

text: sediment metagenome

text: Sediment from archaeological site


text: MPI-EVA

text: public

text: sediment metagenome

text: Captured library mammalian MT

text: Chagyrskaya Cave (Russia)

text: sediment metagenome

text: sediment metagenome

text: Sediment from archaeological site


text: MPI-EVA

text: public

text: sediment metagenome

text: Captured library mammalian MT

text: Denisova Cave (Russia) East Gallery

text: sediment metagenome

text: sediment metagenome

text: Sediment from archaeological site


text: MPI-EVA

text: public

text: sediment metagenome

text: Captured library mammalian MT

text: Denisova Cave (Russia) Main Gallery

text: sediment metagenome

text: sediment metagenome

text: Sediment from archaeological site


text: MPI-EVA

text: public

text: sediment metagenome

text: Captured library mammalian MT

text: Les Cott�s (France)

text: sediment metagenome

text: sediment metagenome

text: Sediment from archaeological site


text: MPI-EVA

text: public

text: sediment metagenome

text: Captured library mammalian MT

text: Trou Al'Wesse (Belgium)

text: sediment metagenome

text: sediment metagenome

text: Sediment from archaeological site


text: MPI-EVA

text: public

text: sediment metagenome

text: Captured library mammalian MT

text: Vindija Cave (Croatia)

text: sediment metagenome

text: sediment metagenome

text: Sediment from archaeological site


text: MPI-EVA

text: public

text: sediment metagenome

text: Captured library mammalian MT

text: El Sidr�n (Spain)

text: sediment metagenome

text: sediment metagenome

text: Sediment from archaeological site


text: MPI-EVA

text: public

text: sediment metagenome

text: Captured library mammalian MT

text: sediment metagenome

text: sediment metagenome

text: Extraction negative control

text: Sediment from archaeological site


text: MPI-EVA

text: public

text: sediment metagenome

text: Captured library mammalian MT

text: sediment metagenome

text: sediment metagenome

text: Library preparation negative control

text: Sediment from archaeological site


text: MPI-EVA

text: public

text: sediment metagenome

text: Captured library human MT

text: Caune de l'Arago (France)

text: sediment metagenome

text: sediment metagenome

text: Sediment from archaeological site


text: MPI-EVA

text: public

text: sediment metagenome

text: Captured library human MT

text: Chagyrskaya Cave (Russia)

text: sediment metagenome

text: sediment metagenome

text: Sediment from archaeological site


text: MPI-EVA

text: public

text: sediment metagenome

text: Captured library human MT

text: Denisova Cave (Russia) East Gallery

text: sediment metagenome

text: sediment metagenome

text: Sediment from archaeological site


text: MPI-EVA

text: public

text: sediment metagenome

text: Captured library human MT

text: Denisova Cave (Russia) Main Gallery

text: sediment metagenome

text: sediment metagenome

text: Sediment from archaeological site


text: MPI-EVA

text: public

text: sediment metagenome

text: Captured library human MT

text: Les Cott�s (France)

text: sediment metagenome

text: sediment metagenome

text: Sediment from archaeological site


text: MPI-EVA

text: public

text: sediment metagenome

text: Captured library human MT

text: Trou Al'Wesse (Belgium)

text: sediment metagenome

text: sediment metagenome

text: Sediment from archaeological site


text: MPI-EVA

text: public

text: sediment metagenome

text: Captured library human MT

text: Vindija Cave (Croatia)

text: sediment metagenome

text: sediment metagenome

text: Sediment from archaeological site


text: MPI-EVA

text: public

text: sediment metagenome

text: Captured library human MT

text: El Sidr�n (Spain)

text: sediment metagenome

text: sediment metagenome

text: Sediment from archaeological site


text: MPI-EVA

text: public

text: sediment metagenome

text: Captured library human MT

text: sediment metagenome

text: sediment metagenome

text: Extraction negative control

text: Sediment from archaeological site


text: MPI-EVA

text: public

text: sediment metagenome

text: Captured library human MT

text: sediment metagenome

text: sediment metagenome

text: Library preparation negative control

text: Sediment from archaeological site


text: public

tag: Namespace:Laboratory for Translational Genetics  VIB Center for Cancer Biology (CCB) Department of Human Genetics, KULeuven

text: ArrayExpress

characteristic: broker name

text: house mouse

text: Protocols: The transgenic Tyr::CreERT2, BRafCA/+, LSL-BRafV600E/+, Ink4a-/-, Ptenfl/fl, Tyr::NRasQ61K, Trp53-/- , Trp53fl/fl, R26RLSL-eYFP mouse lines were described previously (Bosenberg M et al., 2006; Dankort D et al., 2007; Mercer et al., 2005, Krimpenfort P et al., 2001; Lesche R et al., 2002; Ackermann J et al., 2005; Jacks T et al., 1994; Jonkers, J. et al., 2001; Srinivas S et al., 2001) and were provided by Sheri Holmen and Lionel Larue. The characterization of Fes-/- mice has been reported previously and was genotyped and assayed for recombination using PCR (Zirngibl RA et al., 2002). The Tyr::CreERT2;BRafCA/+;Cdkn2a-/- tumors are described in Olvedy et al. , JCI, 2017. Whole-genome DNA libraries were prepared using the KAPA HTP Library preparation kit (Kapa Biosystems, Wilmington, MA, USA)

text: melanoma

characteristic: disease

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: Mus musculus

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Laboratory for Translational Genetics VIB Center for Cancer Biology (CCB) Department of Human Genetics, KULeuven

text: public

text: ArrayExpress

text: house mouse

text: melanoma

text: Mus musculus

text: Mus musculus

text: Mus musculus


sample_BNY_32644_SolA4 020715

characteristic: ENA-LAST-UPDATE

text: GSC

text: public

text: sample_BNY_32644_SolA4 020715

text: unidentified

text: Inoculated with 100,000 Bacillus atrophaeus cfu

text: Saclay, Essone, France

characteristic: geo loc name

text: unidentified

text: unidentified


sample_BNY_32644_SolA3 020715

characteristic: External Id

text: GSC

characteristic: INSDC center name

text: public

text: sample_BNY_32644_SolA3 020715

text: unidentified

text: Inoculated with 1,000 Bacillus atrophaeus cfu

text: Saclay, Essone, France

text: unidentified

text: unidentified


sample_BNY_32644_SolB3 070715

text: GSC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: sample_BNY_32644_SolB3 070715

text: unidentified

text: Reims, Marne, France

text: unidentified

text: unidentified


sample_BNY_32644_SolB2 070715

text: GSC

text: public

characteristic: INSDC status

characteristic: SRA accession

text: sample_BNY_32644_SolB2 070715

text: unidentified

text: Inoculated with 10 Bacillus atrophaeus cfu

text: Reims, Marne, France

text: unidentified

text: unidentified


sample_BNY_32644_SolB4 070715

text: GSC

text: public

text: sample_BNY_32644_SolB4 070715

characteristic: Submitter Id

text: unidentified

characteristic: description

text: Reims, Marne, France

text: unidentified

text: unidentified


sample_BNY_32644_SolA2 020715

text: GSC

text: public

text: sample_BNY_32644_SolA2 020715

text: unidentified

characteristic: common name

text: Saclay, Essone, France

text: unidentified

characteristic: organism

text: unidentified


sample_BNY_32644_SolA1 020715

text: GSC

text: public

text: sample_BNY_32644_SolA1 020715

text: unidentified

text: Control

text: Saclay, Essone, France

text: unidentified

text: unidentified


sample_BNY_32644_SolB1 070715

text: GSC

text: public

text: sample_BNY_32644_SolB1 070715

text: unidentified

text: Control

text: Reims, Marne, France

text: unidentified

text: unidentified


text: public

tag: Namespace:Department of Biochemistry University of Cambridge UK

text: ArrayExpress

characteristic: broker name

text: fission yeast

text: Protocols: Cells were grown at 32C in EMM2 (Moreno et al. Methods Enzymology 194: 795). Cells were grown in EMM2 (Moreno et al. Methods Enzymology 194: 795) in the presence of 10 mM 3-AT for 60 minutes at 32C. This treatment mimics histidine starvation. Cells were fixed by the addition of formaldehyde to a final concentration of 1%, followed by incubation for 30 minutes at 32°C. The reaction was stopped with 10 ml of 2.5 M glycine. Cells were washed extensively in phosphate-buffered saline solution (PBS), resuspended in lysis buffer (50 mM HEPES pH 7.6, 140 mM NaCl, 1 mM EDTA, 0.1% Triton X-100, 1 mM PMSF, and 1× complete protease inhibitor cocktail [Roche]), and lysed with a Fastprep 24 bead-beater (5 cycles of 20 seconds at level 6.5). Chromatin was sheared by sonication with a Bioruptor (Diagenode; 6 cycles of 5 minutes with 30 seconds on / 30 seconds off at high intensity). The lysates were cleared by centrifugation at 20,000 g for 10 minutes, and adjusted to 500 μl at 6 μg/μl total protein, as determined by the BCA assay. 100 µl of magnetic beads (Pan Mouse IgG or protein G, Life Technologies) were blocked with bovine serum albumin (BSA), and coated with 5 µg of mouse monoclonal antibodies against methylated H3K9 (H3K9me2, Abcam ab1120) or with anti-histone H3 rabbit polyclonal antibodies (Abcam ab1791), respectively. The extracts were incubated overnight with the coated beads at 4°C with rotation. Next, the beads were washed twice with 0.8 ml of 50 mM HEPES pH 7.6, 150 mM NaCl, 1 mM EDTA, 1% Triton X-100, and 0.1% sodium deoxycholate, twice in the same buffer containing 500 mM NaCl, twice in 10 mM Tris-HCl pH 8, 250 mM LiCl, 1 mM EDTA, 0.5% NP-40, and 0.5% sodium deoxycholate, and once in Tris-EDTA solution. Elution and crosslinking reversal were performed by incubating the beads in 200 μl of 10 mM Tris-HCl pH 8, 1 mM EDTA, and 1% SDS overnight at 65°C. DNA was purified with Qiagen's a MinElute PCR purification kit (Qiagen) following the manufacturer’s protocol, and eluted in 10 μl. Libraries were prepared using the Next ChIP-seq Library Prep Master Mix Set for Illumina (New England Biolabs) according to the manufacturer’s instructions

text: Fil1-TAP h+

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe

characteristic: title


text: Department of Biochemistry University of Cambridge UK

text: public

text: ArrayExpress

text: fission yeast

text: Fil1-TAP h+

characteristic: genotype

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe


characteristic: ENA-CHECKLIST

text: public

text: ArrayExpress

text: fission yeast

text: Protocols: Cells were grown at 32C in EMM2 (Moreno et al. Methods Enzymology 194: 795). Cells were fixed by the addition of formaldehyde to a final concentration of 1%, followed by incubation for 30 minutes at 32°C. The reaction was stopped with 10 ml of 2.5 M glycine. Cells were washed extensively in phosphate-buffered saline solution (PBS), resuspended in lysis buffer (50 mM HEPES pH 7.6, 140 mM NaCl, 1 mM EDTA, 0.1% Triton X-100, 1 mM PMSF, and 1× complete protease inhibitor cocktail [Roche]), and lysed with a Fastprep 24 bead-beater (5 cycles of 20 seconds at level 6.5). Chromatin was sheared by sonication with a Bioruptor (Diagenode; 6 cycles of 5 minutes with 30 seconds on / 30 seconds off at high intensity). The lysates were cleared by centrifugation at 20,000 g for 10 minutes, and adjusted to 500 μl at 6 μg/μl total protein, as determined by the BCA assay. 100 µl of magnetic beads (Pan Mouse IgG or protein G, Life Technologies) were blocked with bovine serum albumin (BSA), and coated with 5 µg of mouse monoclonal antibodies against methylated H3K9 (H3K9me2, Abcam ab1120) or with anti-histone H3 rabbit polyclonal antibodies (Abcam ab1791), respectively. The extracts were incubated overnight with the coated beads at 4°C with rotation. Next, the beads were washed twice with 0.8 ml of 50 mM HEPES pH 7.6, 150 mM NaCl, 1 mM EDTA, 1% Triton X-100, and 0.1% sodium deoxycholate, twice in the same buffer containing 500 mM NaCl, twice in 10 mM Tris-HCl pH 8, 250 mM LiCl, 1 mM EDTA, 0.5% NP-40, and 0.5% sodium deoxycholate, and once in Tris-EDTA solution. Elution and crosslinking reversal were performed by incubating the beads in 200 μl of 10 mM Tris-HCl pH 8, 1 mM EDTA, and 1% SDS overnight at 65°C. DNA was purified with Qiagen's a MinElute PCR purification kit (Qiagen) following the manufacturer’s protocol, and eluted in 10 μl. Libraries were prepared using the Next ChIP-seq Library Prep Master Mix Set for Illumina (New England Biolabs) according to the manufacturer’s instructions

text: Fil1-TAP h+

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe


characteristic: ENA-FIRST-PUBLIC

text: public

text: ArrayExpress

text: fission yeast

text: h+

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe


characteristic: ENA-LAST-UPDATE

text: OREGON STATE UNIVERS

text: public

tag: Namespace:OREGON STATE UNIVERS

text: ArrayExpress

text: long-grained rice

text: Protocols: A leaf punch of approximately 1 centimeter in diameter was collected from plants DNA Leaf tissue from each rice variety was extracted using a Qiagen DNeasy kit per manufacturer's protocols. DNA from each rice variety was added to Promega PCR Master Mix as per manufacturer's protocol for a 50 microliter reaction. Purification of PCR product was obtained by precipitating with a 9:1 ratio of 3M sodium acetate and 1:3 ratio of 100% ethanol. After 20 minute incubation at -20 Celsius, samples were centrifuged for 30 minutes. Ethanol was removed from the sample and the pellet containing purified PCR product was dried. PCR product was resuspended in double distilled water.

text: Oryza sativa Indica Group

text: Oryza sativa Indica Group

text: leaf

characteristic: organism part

text: Oryza sativa Indica Group

characteristic: strain


characteristic: External Id

text: OREGON STATE UNIVERS

characteristic: INSDC center name

text: public

text: ArrayExpress

text: long-grained rice

text: Oryza sativa Indica Group

text: Oryza sativa Indica Group

text: leaf

text: Oryza sativa Indica Group

text: IR29 PI 393986 OR06AR SD


text: OREGON STATE UNIVERS

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ArrayExpress

text: rice

text: Oryza sativa

text: Oryza sativa

text: leaf

text: Oryza sativa


text: OREGON STATE UNIVERS

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ArrayExpress

text: Japanese rice

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group

text: leaf

text: Oryza sativa Japonica Group

text: Nipponbare GSOR: 1000


E-MTAB-5583:Nona Bokra-RSS1-SSR

text: OREGON STATE UNIVERS

text: public

text: E-MTAB-5583:Nona Bokra-RSS1-SSR

characteristic: Submitter Id

text: ArrayExpress

text: rice

characteristic: description

text: Oryza sativa

text: Oryza sativa

text: leaf

text: Oryza sativa

text: Nona Bokra-RSS1-SSR


text: OREGON STATE UNIVERS

text: public

text: ArrayExpress

text: long-grained rice

characteristic: common name

text: Oryza sativa Indica Group

characteristic: organism

text: Oryza sativa Indica Group

text: leaf

text: Oryza sativa Indica Group

text: Pokkali GSOR: 312020


text: UNIVERSITY OF GLASGOW

text: public

tag: Namespace:UNIVERSITY OF GLASGOW

text: 16S DNA V4 Region Amplicons from granular sludge samples

text: anaerobic digester metagenome

text: anaerobic digester metagenome

text: EGSB

characteristic: title


name: 16S DNA V4 Region Amplicons from granular sludge samples

text: UNIVERSITY OF GLASGOW

text: public

text: anaerobic digester metagenome

text: anaerobic digester metagenome

text: EGSB


text: HANYANG UNIVERSITY

text: public

tag: Namespace:HANYANG UNIVERSITY

text: human

text: Homo sapiens

text: Homo sapiens

text: RGEN-treated sample


text: HANYANG UNIVERSITY

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Control sample


text: UNIVERSITY OF ABERDEEN

text: public

tag: Namespace:UNIVERSITY OF ABERDEEN

text: Campylobacter upsaliensis

text: Campylobacter upsaliensis

text: iCaMPS-4 study clinical/human isolate


text: UNIVERSITY OF ABERDEEN

text: public

text: Campylobacter coli

text: Campylobacter coli

text: iCaMPS-4 study clinical/human isolate


text: UNIVERSITY OF ABERDEEN

text: public

text: Campylobacter jejuni

text: Campylobacter jejuni

text: iCaMPS-4 study clinical/human isolate


text: UNIVERSITY OF ABERDEEN

text: public

text: Campylobacter jejuni

text: Campylobacter jejuni

text: iCaMPS-4 study chicken isolate


text: uBiome

text: public

characteristic: collection date

text: human-associated habitat

characteristic: environment (biome)

text: intestine environment

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

text: mimarks-survey

characteristic: investigation type

text: human gut metagenome

text: 16s RNA gene sequencing of clinically relevant microbial taxa from the human gut

characteristic: project name

text: human gut metagenome

text: Illumina

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Appreciate the Beauty of Life, Inc.

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Appreciate the Beauty of Life, Inc.

text: human

text: Homo sapiens

text: Homo sapiens


text: Kalmar county hospital

text: public

characteristic: Submitter Id

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: Assembly of Escherichia coli

characteristic: title


text: Kalmar county hospital

text: public

characteristic: description

text: Escherichia coli

text: Escherichia coli

text: Assembly of Escherichia coli


B

text: Nutricia Research

text: public

text: B

tag: Namespace:Nutricia Research

characteristic: collection date

text: human

characteristic: common name

text: Homo sapiens

characteristic: environment (biome)

text: intestine environment

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Netherlands

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: Homo sapiens

text: 8 Sample Infant Proteome

text: Homo sapiens

text: Pyrosequencing

text: Fecal Sample


C

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Nutricia Research

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: C

text: human

text: Homo sapiens

text: intestine environment

text: feces

text: Netherlands

text: human-gut

text: metagenome

characteristic: investigation type

text: Homo sapiens

text: 8 Sample Infant Proteome

characteristic: project name

text: Homo sapiens

text: Pyrosequencing

characteristic: sequencing method

text: Fecal Sample


E

text: Nutricia Research

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E

characteristic: Submitter Id

characteristic: collection date

text: human

characteristic: common name

text: Homo sapiens

text: intestine environment

text: feces

text: Netherlands

text: human-gut

text: metagenome

text: Homo sapiens

characteristic: organism

text: 8 Sample Infant Proteome

text: Homo sapiens

text: Pyrosequencing

text: Fecal Sample

characteristic: title


M

characteristic: ENA-CHECKLIST

text: Nutricia Research

text: public

text: M

text: human

text: Homo sapiens

characteristic: environment (biome)

text: intestine environment

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Netherlands

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: Homo sapiens

text: 8 Sample Infant Proteome

text: Homo sapiens

text: Pyrosequencing

text: Fecal Sample


N

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Nutricia Research

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: N

text: human

text: Homo sapiens

text: intestine environment

text: feces

text: Netherlands

text: human-gut

text: metagenome

characteristic: investigation type

text: Homo sapiens

text: 8 Sample Infant Proteome

characteristic: project name

text: Homo sapiens

text: Pyrosequencing

characteristic: sequencing method

text: Fecal Sample


P

text: Nutricia Research

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: P

characteristic: Submitter Id

characteristic: collection date

text: human

characteristic: common name

text: Homo sapiens

text: intestine environment

text: feces

text: Netherlands

text: human-gut

text: metagenome

text: Homo sapiens

characteristic: organism

text: 8 Sample Infant Proteome

text: Homo sapiens

text: Pyrosequencing

text: Fecal Sample

characteristic: title


R

characteristic: ENA-CHECKLIST

text: Nutricia Research

text: public

text: R

text: human

text: Homo sapiens

characteristic: environment (biome)

text: intestine environment

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Netherlands

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: Homo sapiens

text: 8 Sample Infant Proteome

text: Homo sapiens

text: Pyrosequencing

text: Fecal Sample


T

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Nutricia Research

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: T

text: human

text: Homo sapiens

text: intestine environment

text: feces

text: Netherlands

text: human-gut

text: metagenome

characteristic: investigation type

text: Homo sapiens

text: 8 Sample Infant Proteome

characteristic: project name

text: Homo sapiens

text: Pyrosequencing

characteristic: sequencing method

text: Fecal Sample


text: NETHERLANDS CANCER INSTITUTE

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:NETHERLANDS CANCER INSTITUTE

characteristic: Submitter Id

text: house mouse

characteristic: common name

text: Tumor tissue

characteristic: description

text: Mus musculus

characteristic: organism

text: Mus musculus

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF DELHI

text: public

tag: Namespace:UNIVERSITY OF DELHI

characteristic: collection date

text: Emticicia sp. MM was reconstructed from metagenome sequence data of water samples collected from a hot spring, Manikaran, India. This genotype includes one chromosome and its four plasmids.

text: Hot spring

characteristic: environment (biome)

text: Neutral hot spring

characteristic: environment (feature)

text: Water

characteristic: environment (material)

text: India

characteristic: geographic location (country and/or sea)

unit: m

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Emticicia oligotrophica

text: Manikaran hot spring metagenomics

text: Emticicia oligotrophica

text: Illumina GAII

text: Emticicia sp. MM pMM01

text: water

characteristic: water environmental package


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF DELHI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Hot spring

text: Neutral hot spring

text: Water

text: India

text: metagenome

characteristic: investigation type

text: Emticicia oligotrophica

text: Manikaran hot spring metagenomics

characteristic: project name

text: Emticicia oligotrophica

text: Illumina GAII

characteristic: sequencing method

text: Emticicia sp. MM pMM02

text: water


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF DELHI

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: Hot spring

characteristic: environment (biome)

text: Neutral hot spring

characteristic: environment (feature)

text: Water

text: India

text: metagenome

text: Emticicia oligotrophica

characteristic: organism

text: Manikaran hot spring metagenomics

text: Emticicia oligotrophica

text: Illumina GAII

text: Emticicia sp. MM pMM03

characteristic: title

text: water


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF DELHI

text: public

text: Hot spring

text: Neutral hot spring

text: Water

characteristic: environment (material)

text: India

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Emticicia oligotrophica

text: Manikaran hot spring metagenomics

text: Emticicia oligotrophica

text: Illumina GAII

text: Emticicia sp. MM pMM04

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

text: WTSI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Good annotation of plasmid genomes is essential to maximise the value of the rapidly increasing volume of plasmid sequences. This short review highlights some of the current issues and suggests some ways forward. Where a well-studied related plasmid system exists we recommend that new annotation adheres to the convention already established for that system, so long as it is based on sound principles and solid experimental evidence, even if some of the new genes are more similar to homologues in different systems. Where a well-established model does not exist we provide generic gene names that reflect likely biochemical activity rather than overall purpose particularly, for example, where genes clearly belong to a type IV secretion system but it is not known whether they function in conjugative transfer or virulence. We also recommend that annotators use a whole system naming approach to avoid ending up with an illogical mixture of names from other systems based on the highest scoring match from a BLAST search. In addition, where function has not been experimentally established we recommend using just the locus tag, rather than a function-related gene name, while recording possible functions as notes rather than in a provisional name.

text: Escherichia coli

text: Escherichia coli

text: K12 J53

characteristic: strain

text: Annotation of Plasmid Genes


text: Plasmodium falciparum

characteristic: ArrayExpress-SPECIES

text: SC

text: public

characteristic: Submitter Id

text: malaria parasite P. falciparum

characteristic: common name

text: Plasmodium falciparum

characteristic: organism

text: Plasmodium falciparum

characteristic: subject id

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: FUNCTIONAL GENOMICS CENTER ZURICH

text: public

tag: Namespace:FUNCTIONAL GENOMICS CENTER ZURICH

text: house mouse

characteristic: description

text: Mus musculus

text: Mus musculus


characteristic: ENA-CHECKLIST

text: public

tag: Namespace:Technical University Munich, Chair of Animal Breeding

text: cattle

text: Bos taurus

text: Bos taurus

text: Corpus Luteum

characteristic: tissue type

text: CL oestrous cycle


text: Technical University Munich, Chair of Animal Breeding

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: Corpus Luteum

text: CL oestrous cycle


characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:Centre for Genomic Epidemiology, National Food Institute, Technical University of Denmark (DTU), Denmark

text: DTU-GE

characteristic: broker name

text: DTU

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: not provided

characteristic: host health state

text: poultry meat

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Enterococcus faecium

characteristic: isolate

text: poultry meat

characteristic: isolation source host associated

text: Enterococcus faecium

text: Enterococcus faecium

text: ENTEROCOCCI


tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Centre for Genomic Epidemiology, National Food Institute, Technical University of Denmark (DTU), Denmark

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: DTU-GE

text: DTU

text: No

text: Denmark

text: not provided

text: poultry meat

text: Yes

text: Enterococcus faecium

text: poultry meat

text: Enterococcus faecium

characteristic: organism

text: Enterococcus faecium

text: ENTEROCOCCI

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DTU-GE

characteristic: broker name

text: DTU

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Denmark

text: not provided

text: veal

text: Yes

text: Enterococcus faecium

text: veal

text: Enterococcus faecalis

text: Enterococcus faecalis

text: ENTEROCOCCI


text: WUR

text: public

text: Akkermansia muciniphila grown on mucin, replicate 1

characteristic: description

text: Akkermansia muciniphila ATCC BAA-835

text: Akkermansia muciniphila ATCC BAA-835

text: Akkermansia pure culture, replicate 1


characteristic: ENA-CHECKLIST

text: WUR

text: public

text: Akkermansia muciniphila grown on mucin, replicate 2

text: Akkermansia muciniphila ATCC BAA-835

text: Akkermansia muciniphila ATCC BAA-835

text: Akkermansia pure culture, replicate 2


characteristic: ENA-FIRST-PUBLIC

text: WUR

text: public

text: Akkermansia muciniphila grown in coculture with Eubacterium hallii on mucin, replicate 1

text: synthetic metagenome

text: synthetic metagenome

text: Akkermansia coculture with Eubacterium hallii, replicate 1


characteristic: ENA-LAST-UPDATE

text: WUR

text: public

text: Akkermansia muciniphila grown in coculture with Eubacterium hallii on mucin, replicate 2

text: synthetic metagenome

text: synthetic metagenome

text: Akkermansia coculture with Eubacterium hallii, replicate 2


characteristic: External Id

text: WUR

text: public

text: Akkermansia muciniphila grown in coculture with Anaerostipes caccae on mucin, replicate 1

text: synthetic metagenome

text: synthetic metagenome

text: Akkermansia coculture with Anaerostipes caccae, replicate 1


text: WUR

text: public

characteristic: SRA accession

text: Akkermansia muciniphila grown in coculture with Anaerostipes caccae on mucin, replicate 2

text: synthetic metagenome

text: synthetic metagenome

text: Akkermansia coculture with Anaerostipes caccae, replicate 2


Sbecad

text: NETHERLANDS CANCER INSTITUTE

text: public

text: Sbecad

characteristic: Submitter Id

text: house mouse

characteristic: common name

text: Pooled DNA from tumor tissue

text: Mus musculus

text: Mus musculus

text: Sbecad


text: NETHERLANDS CANCER INSTITUTE

text: public

text: house mouse

text: Pooled DNA from tumor tissue

text: Mus musculus

characteristic: organism

text: Mus musculus

characteristic: title


text: UNIMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Listeria monocytogenes 5468

text: Listeria monocytogenes

text: Listeria monocytogenes


text: UNIMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Listeria monocytogenes 5471

text: Listeria monocytogenes

text: Listeria monocytogenes


text: UNIMI

text: public

text: Listeria monocytogenes 5476

text: Listeria monocytogenes

text: Listeria monocytogenes


text: UNIMI

text: public

text: Listeria monocytogenes 5477

text: Listeria monocytogenes

text: Listeria monocytogenes


text: UNIMI

text: public

text: Listeria monocytogenes 5478

text: Listeria monocytogenes

text: Listeria monocytogenes


text: UNIMI

text: public

text: Listeria monocytogenes 5479

text: Listeria monocytogenes

text: Listeria monocytogenes


text: UNIMI

text: public

text: Listeria monocytogenes 5482

text: Listeria monocytogenes

text: Listeria monocytogenes


text: UNIMI

text: public

text: Listeria monocytogenes 5483

text: Listeria monocytogenes

text: Listeria monocytogenes


text: UNIMI

text: public

text: Listeria monocytogenes 5485

text: Listeria monocytogenes

text: Listeria monocytogenes


text: London Institute of Medical Sciences

text: public

tag: Namespace:London Institute of Medical Sciences

text: white-tailed deer

text: Odocoileus virginianus

text: Odocoileus virginianus

text: Female

characteristic: sex

text: Blood

characteristic: tissue type


E-MTAB-5440:Sample 1

text: public

text: E-MTAB-5440:Sample 1

tag: Namespace:Faculty of Exact and Natural Sciences. University of Buenos Aires

text: ArrayExpress

characteristic: broker name

text: Protocols: Microaerobic growth 50 rpm in sealed bottles ScriptSeq v2RNA-Seq library preparation kit

text: low oxygen

characteristic: growth condition

text: Pseudomonas extremaustralis

text: Pseudomonas extremaustralis

text: Pseudomonas extremaustralis

text: Sample 1


E-MTAB-5440:Sample 2

characteristic: ENA-CHECKLIST

text: Faculty of Exact and Natural Sciences. University of Buenos Aires

text: public

text: E-MTAB-5440:Sample 2

text: ArrayExpress

characteristic: description

text: low oxygen

text: Pseudomonas extremaustralis

text: Pseudomonas extremaustralis

text: Pseudomonas extremaustralis

text: Sample 2


E-MTAB-5440:Sample 3

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-5440:Sample 3

text: ArrayExpress

text: Protocols: aerobic growth 250 rpm, shaken flask ScriptSeq v2RNA-Seq library preparation kit

text: high oxygen

text: Pseudomonas extremaustralis

text: Pseudomonas extremaustralis

text: Pseudomonas extremaustralis

text: Sample 3


E-MTAB-5440:Sample 4

characteristic: External Id

text: public

characteristic: SRA accession

text: E-MTAB-5440:Sample 4

text: ArrayExpress

text: high oxygen

text: Pseudomonas extremaustralis

text: Pseudomonas extremaustralis

text: Pseudomonas extremaustralis

text: Sample 4


text: HELMHOLTZ CENTER FOR INFECTION RESEARCH

text: public

tag: Namespace:HELMHOLTZ CENTER FOR INFECTION RESEARCH

characteristic: Submitter Id

text: metagenome

text: metagenome


text: public

tag: Namespace:Institute of Microbiology and Infection School of Biosciences University of Birmingham

text: ArrayExpress

text: Protocols: Prototypical enterotoxigenic Escherichia coli strain first isolated from a patient with cholera-like symptoms in Bangladesh prior to 1973 Cells were grown in liquid LB medium at 37 degrees with shaking Immunoprecipitations were done as described by Haycocks et al. (PLoS Pathog. 2015. 11:e1004605) using bacterial strain H10407 transformed with plasmids pAMNF or pAMNM encoding MarR N-terminally fused to 3xFLAG or 8xmyc respectively. After first growing cells to midlog phase, crosslinking, and sonication, protein DNA complexes were immunoprecipitated using anti-FLAG (Sigma). Libraries were prepared using immunoprecipited protein-DNA complexes immobilised with Protein A-sepharose. DNA fragments were then blunt ended, A-tailed and barcoded. This was done using an NEB quick blunting and ligation kit, the Klenow fragment (5’-3’ exo-, NEB) and NEXTflex ChIP-seq barcodes (Bioo Scientific). Following elution of complexes from the Protein-A sepharose, crosslinks were reversed and barcoded libraries were amplified by PCR. The number of PCR cycles was determined empirically for each library. After amplification, library concentration was quantified using Qubit analysis and real time PCR.

text: pAMNF

characteristic: genotype

text: anti-FLAG

characteristic: immunoprecipitate

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: expression of MarR-3xFLAG fusion protein

characteristic: phenotype

text: Escherichia coli

characteristic: strain


text: Institute of Microbiology and Infection School of Biosciences University of Birmingham

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: pAMNF

text: anti-FLAG

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: ArrayExpress

characteristic: broker name

text: pAMNM

text: anti-FLAG

text: Escherichia coli

text: Escherichia coli

text: expression of MarR-8xmyc fusion protein

text: Escherichia coli


characteristic: ENA-FIRST-PUBLIC

text: The James Hutton Institute

text: public

tag: Namespace:The James Hutton Institute

text: thale cress

characteristic: common name

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 1


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 2


text: The James Hutton Institute

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 3


text: The James Hutton Institute

text: public

text: thale cress

characteristic: genotype

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 4


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: Timepoint 5


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 6


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 7


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 8


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 9


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 10


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 11


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 12


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 13


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 14


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 15


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 16


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 17


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 18


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 19


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 20


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 21


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 22


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 23


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 24


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 25


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 26


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 1


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 2


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 3


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 4


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 5


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 6


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 7


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 8


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 9


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 10


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 11


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 12


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 13


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 14


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 15


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 16


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 17


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 18


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 19


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 20


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 21


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 22


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 23


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 24


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 25


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 26


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 1


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 2


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 3


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 4


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 5


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 6


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 7


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 8


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 9


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 10


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 11


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 12


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 13


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 14


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 15


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 16


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 17


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 19


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 18


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 20


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 22


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 24


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 25


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 21


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 23


text: The James Hutton Institute

text: public

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Timepoint 26


text: female

characteristic: ArrayExpress-SEX

text: Mus musculus

characteristic: ArrayExpress-SPECIES

text: SC

text: public

text: house mouse

text: Female

characteristic: gender

text: Mus musculus

text: Mus musculus

characteristic: subject id


text: Functional Genomics Genter Zurich

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:Functional Genomics Genter Zurich

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: host health state

text: Atheris squamigera

characteristic: host scientific name

characteristic: isolate

text: Snake

characteristic: isolation source

text: Chlamydia sp. H15-1957-10C

text: Chlamydia sp. H15-1957-10C

text: Chlamydia sp. nov. H15-1957-10C


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Functional Genomics Genter Zurich

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Snake isolate of Chlamydia

characteristic: description

text: Switzerland

text: not provided

text: Pantherophis guttatus

text: Snake

text: Chlamydia sp. S15-834C

text: Chlamydia sp. S15-834C

text: Chlamydia sp. S15-834C

characteristic: title


text: Functional Genomics Genter Zurich

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: Snake Chlamydia isolate

text: Switzerland

text: not provided

text: Pantherophis guttatus

text: Snake

text: Chlamydia sp. H15-1957-10C

characteristic: organism

text: Chlamydia sp. H15-1957-10C

text: Chlamydia sp. H15-1947-3C


text: Functional Genomics Genter Zurich

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: collection date

text: Snake Chlamydia isolate

text: Switzerland

text: not provided

text: Pantherophis guttatus

text: Snake

text: Chlamydia sp. S15-834C

text: Chlamydia sp. S15-834C

text: Chlamydia sp. S15-834K


Steps 1-9 spermatids

text: UNIVERSITE DE SHERBROOKE

text: public

text: Steps 1-9 spermatids

tag: Namespace:UNIVERSITE DE SHERBROOKE

text: Steps 1-9 Spermatids

characteristic: cell type

text: house mouse

characteristic: common name

text: Double strand breaks captured by DBrIC (see PMID 27825743)

text: Mus musculus

text: Mus musculus

characteristic: strain

text: Testis

characteristic: tissue type

text: DSB Steps 1-9 Spermatids


Steps 10-14 Spermatids

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITE DE SHERBROOKE

text: public

text: Steps 10-14 Spermatids

text: Steps 10-14 Spermatids

text: house mouse

text: Mus musculus

text: Mus musculus

text: Testis

text: DSB Steps 1-9 Spermatids


Steps 15-16 Spermatids

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITE DE SHERBROOKE

text: public

text: Steps 15-16 Spermatids

text: Steps 15-16 Spermatids

text: house mouse

text: Mus musculus

text: Mus musculus

text: Testis

text: DSB Steps 15-16 Spermatids


text: UNIVERSITY OF COPENH

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:UNIVERSITY OF COPENH

text: gut metagenome

text: gut metagenome

text: Immunological Effects of Reduced Mucosal Integrity in the Early Life of BALB/c Mice


text: UNIVERSITY OF ABERDEEN

text: public

tag: Namespace:UNIVERSITY OF ABERDEEN

text: Campylobacter jejuni

text: Campylobacter jejuni

text: iCaMPS-4 study clinical/human isolate

characteristic: title


text: UNIVERSITY OF ABERDEEN

characteristic: INSDC center name

text: public

text: Campylobacter coli

text: Campylobacter coli

text: iCaMPS-4 study clinical/human isolate


text: UNIVERSITY OF ABERDEEN

text: public

characteristic: Submitter Id

text: Campylobacter jejuni

text: Campylobacter jejuni

text: iCaMPS-4 study chicken isolate


text: UNIVERSITY OF ABERDEEN

text: public

text: Campylobacter coli

characteristic: organism

text: Campylobacter coli

text: iCaMPS-4 study chicken isolate


text: UNIVERSITY OF ABERDEEN

characteristic: INSDC first public

text: public

text: Campylobacter lari

text: Campylobacter lari

text: iCaMPS-4 study clinical/human isolate


text: UNIVERSITY OF ABERDEEN

characteristic: INSDC last update

text: public

text: Campylobacter upsaliensis

text: Campylobacter upsaliensis

text: iCaMPS-4 study clinical/human isolate


text: UNIVERSITY OF ABERDEEN

text: public

text: Campylobacter jejuni

text: Campylobacter jejuni

text: iCaMPS-4 study wild bird isolate


text: CGR

text: public

text: Group A Streptococcus (GAS)

text: Streptococcus pyogenes sample from Liverpool, UK outbreak

characteristic: description

text: Streptococcus pyogenes

text: Streptococcus pyogenes

text: Streptococcus pyogenes


text: London Institute of Medical Sciences

text: public

text: Pere David's deer

text: Elaphurus davidianus

text: Elaphurus davidianus

text: Blood


text: public

tag: Namespace:Max Planck Institute for Evolutionary Biology

text: synthetic construct

text: synthetic construct


text: Max Planck Institute for Evolutionary Biology

text: public

text: synthetic construct

text: synthetic construct


text: Faculty of medecine and pharmacy RABAT

text: public

tag: Namespace:Faculty of medecine and pharmacy RABAT

text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: Whole-Genome Sequencing of Multidrug-Resistant Acinetobacter baumannii isolated from a Moroccan hospital carriage


text: public

tag: Namespace:Institute for Bioengeneering and Biosciences

text: Hospital Santa Maria

characteristic: collected by

characteristic: collection date

text: Portugal

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

characteristic: isolate

text: Cystic fibrosis patient

characteristic: isolation source

text: 38.72 N 9.14 W

characteristic: lat lon

text: Burkholderia cenocepacia

text: Burkholderia cenocepacia

text: Burkholderia clinical isolate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institute for Bioengeneering and Biosciences

text: public

characteristic: INSDC status

text: Hospital Santa Maria

text: Portugal

text: diseased

text: Homo sapiens

text: Cystic fibrosis patient

text: 38.72 N 9.14 W

text: Burkholderia cenocepacia

text: Burkholderia cenocepacia

text: Burkholderia clinical isolate


characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Hospital Santa Maria

text: Portugal

text: diseased

text: Homo sapiens

text: Cystic fibrosis patient

text: 38.72 N 9.14 W

text: Burkholderia multivorans

characteristic: organism

text: Burkholderia multivorans

text: Burkholderia clinical isolate

characteristic: title


IST419 new

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: IST419 new

text: Hospital Santa Maria

characteristic: collected by

characteristic: collection date

text: Portugal

text: diseased

text: Homo sapiens

text: Cystic fibrosis patient

text: 38.72 N 9.14 W

text: Burkholderia multivorans

text: Burkholderia multivorans

text: Burkholderia clinical isolate


text: Vibrio cholerae

characteristic: ArrayExpress-SPECIES

text: Non O1

text: SC

text: public

text: Vibrio cholerae

characteristic: common name

text: Vibrio cholerae

text: Vibrio cholerae

characteristic: subject id


text: Vibrio cholerae

characteristic: ENA-CHECKLIST

text: SC

text: public

text: Vibrio cholerae

text: Vibrio cholerae

text: Vibrio cholerae


text: Vibrio cholerae

text: ElTor O1

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: Vibrio cholerae

text: Vibrio cholerae

text: Vibrio cholerae


text: Vibrio cholerae

text: Classical

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: Vibrio cholerae

text: Vibrio cholerae

text: Vibrio cholerae


characteristic: External Id

text: MMRI

text: public

text: human

text: L1 promoter methylation sequencing

characteristic: description

text: Homo sapiens

text: Homo sapiens


text: UCSDMI

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Missing: Not provided

characteristic: age

text: months

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

characteristic: body habitat

text: UBERON:mucus

characteristic: body product

text: UBERON:skin

characteristic: body site

text: pigeon biogeography, ctrl mouth

text: ominivorous

characteristic: diet

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-oral

characteristic: env package

text: saliva

text: USA:CO:Boulder

characteristic: geo loc name

text: JPS

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

text: adult

characteristic: life stage

characteristic: longitude

text: human oral metagenome

text: UCSDMI

text: TRUE

text: TRUE

characteristic: public

text: saliva

characteristic: sample type

text: human oral metagenome

text: male

characteristic: sex

text: Missing: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Not provided

characteristic: age

text: months

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

characteristic: body habitat

text: UBERON:mucus

text: UBERON:skin

text: iguana biogeography, ctrl mouth

characteristic: description

text: vegetarian

text: TRUE

text: urban biome

text: human-associated habitat

text: human-oral

text: saliva

text: USA:CO:Boulder

text: JPS

text: adult

text: human oral metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: TRUE

text: saliva

text: human oral metagenome

text: male

characteristic: title

text: Missing: Not provided


characteristic: ENA-CHECKLIST

text: UCSDMI

text: public

text: Missing: Not provided

text: months

text: UBERON:skin

text: UBERON:mucus

characteristic: body product

text: UBERON:skin

characteristic: body site

text: pigeon biogeography, ctrl bench paper

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: misc environment

characteristic: env package

text: paper product

text: USA:CO:Boulder

characteristic: geo loc name

text: CTRL.BENCH PAPER 1

characteristic: host subject id

characteristic: latitude

text: adult

characteristic: life stage

characteristic: longitude

text: indoor metagenome

text: UCSDMI

text: TRUE

text: TRUE

characteristic: public

text: control bench paper

characteristic: sample type

text: indoor metagenome

text: Missing: Not provided


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Not provided

characteristic: age

text: months

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

characteristic: body habitat

text: UBERON:mucus

text: UBERON:skin

text: iguana biogeography, ctrl bench paper

characteristic: description

text: vegetarian

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: misc environment

text: paper product

text: USA:CO:Boulder

text: CTRL.BENCH PAPER 2

text: adult

text: indoor metagenome

text: UCSDMI

text: TRUE

text: TRUE

text: control bench paper

text: indoor metagenome

text: Missing: Not provided


characteristic: ENA-CHECKLIST

text: UCSDMI

text: public

text: Missing: Not provided

text: months

text: UBERON:skin

text: UBERON:mucus

characteristic: body product

text: UBERON:skin

characteristic: body site

text: frog biogeography, dorsal right distal leg section

text: omnivorous

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: mucus

text: USA:CO:Boulder

characteristic: geo loc name

text: Rana Catesbiana 1

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

text: adult

characteristic: life stage

characteristic: longitude

text: frog metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: TRUE

characteristic: public

text: skin

text: frog metagenome

text: male

characteristic: sex

characteristic: title

text: Missing: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Not provided

characteristic: age

text: months

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

characteristic: body habitat

text: UBERON:mucus

text: UBERON:skin

text: frog biogeography, ventral right distal leg section

characteristic: description

text: omnivorous

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: mucus

text: USA:CO:Boulder

text: Rana Catesbiana 1

text: adult

text: frog metagenome

text: UCSDMI

text: TRUE

text: TRUE

text: skin

characteristic: sample type

text: frog metagenome

text: male

text: Missing: Not provided


characteristic: ENA-CHECKLIST

text: UCSDMI

text: public

text: Missing: Not provided

text: months

text: UBERON:skin

text: UBERON:mucus

characteristic: body product

text: UBERON:skin

characteristic: body site

text: frog biogeography, dorsal medial trunk

text: omnivorous

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: mucus

text: USA:CO:Boulder

characteristic: geo loc name

text: Rana Catesbiana 1

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

text: adult

characteristic: life stage

characteristic: longitude

text: frog metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: TRUE

characteristic: public

text: skin

text: frog metagenome

text: male

characteristic: sex

characteristic: title

text: Missing: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Not provided

characteristic: age

text: months

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

characteristic: body habitat

text: UBERON:mucus

text: UBERON:skin

text: frog biogeography, ventral medial trunk

characteristic: description

text: omnivorous

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: mucus

text: USA:CO:Boulder

text: Rana Catesbiana 1

text: adult

text: frog metagenome

text: UCSDMI

text: TRUE

text: TRUE

text: skin

characteristic: sample type

text: frog metagenome

text: male

text: Missing: Not provided


characteristic: ENA-CHECKLIST

text: UCSDMI

text: public

text: Missing: Not provided

text: months

text: UBERON:skin

text: UBERON:mucus

characteristic: body product

text: UBERON:skin

characteristic: body site

text: frog biogeography, dorsal right trunk side

text: omnivorous

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: mucus

text: USA:CO:Boulder

characteristic: geo loc name

text: Rana Catesbiana 1

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

text: adult

characteristic: life stage

characteristic: longitude

text: frog metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: TRUE

characteristic: public

text: skin

text: frog metagenome

text: male

characteristic: sex

characteristic: title

text: Missing: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Not provided

characteristic: age

text: months

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

characteristic: body habitat

text: UBERON:mucus

text: UBERON:skin

text: frog biogeography, ventral right trunk side

characteristic: description

text: omnivorous

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: mucus

text: USA:CO:Boulder

text: Rana Catesbiana 1

text: adult

text: frog metagenome

text: UCSDMI

text: TRUE

text: TRUE

text: skin

characteristic: sample type

text: frog metagenome

text: male

text: Missing: Not provided


characteristic: ENA-CHECKLIST

text: UCSDMI

text: public

text: Missing: Not provided

text: months

text: UBERON:skin

text: UBERON:mucus

characteristic: body product

text: UBERON:skin

characteristic: body site

text: frog biogeography, dorsal left arm

text: omnivorous

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: mucus

text: USA:CO:Boulder

characteristic: geo loc name

text: Rana Catesbiana 1

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

text: adult

characteristic: life stage

characteristic: longitude

text: frog metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: TRUE

characteristic: public

text: skin

text: frog metagenome

text: male

characteristic: sex

characteristic: title

text: Missing: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Not provided

characteristic: age

text: months

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

characteristic: body habitat

text: UBERON:mucus

text: UBERON:skin

text: frog biogeography, ventral left arm

characteristic: description

text: omnivorous

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: mucus

text: USA:CO:Boulder

text: Rana Catesbiana 1

text: adult

text: frog metagenome

text: UCSDMI

text: TRUE

text: TRUE

text: skin

characteristic: sample type

text: frog metagenome

text: male

text: Missing: Not provided


characteristic: ENA-CHECKLIST

text: UCSDMI

text: public

text: Missing: Not provided

text: months

text: UBERON:skin

text: UBERON:mucus

characteristic: body product

text: UBERON:skin

characteristic: body site

text: frog biogeography, dorsal left shoulder

text: omnivorous

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: mucus

text: USA:CO:Boulder

characteristic: geo loc name

text: Rana Catesbiana 1

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

text: adult

characteristic: life stage

characteristic: longitude

text: frog metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: TRUE

characteristic: public

text: skin

text: frog metagenome

text: male

characteristic: sex

characteristic: title

text: Missing: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Not provided

characteristic: age

text: months

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

characteristic: body habitat

text: UBERON:mucus

text: UBERON:skin

text: frog biogeography, ventral left shoulder

characteristic: description

text: omnivorous

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: mucus

text: USA:CO:Boulder

text: Rana Catesbiana 1

text: adult

text: frog metagenome

text: UCSDMI

text: TRUE

text: TRUE

text: skin

characteristic: sample type

text: frog metagenome

text: male

text: Missing: Not provided


characteristic: ENA-CHECKLIST

text: UCSDMI

text: public

text: Missing: Not provided

text: months

text: UBERON:skin

text: UBERON:mucus

characteristic: body product

text: UBERON:skin

characteristic: body site

text: frog biogeography, dorsal medial collarbone

text: omnivorous

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: mucus

text: USA:CO:Boulder

characteristic: geo loc name

text: Rana Catesbiana 1

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

text: adult

characteristic: life stage

characteristic: longitude

text: frog metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: TRUE

characteristic: public

text: skin

text: frog metagenome

text: male

characteristic: sex

characteristic: title

text: Missing: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Not provided

characteristic: age

text: months

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

characteristic: body habitat

text: UBERON:mucus

text: UBERON:skin

text: frog biogeography, ventral medial collarbone

characteristic: description

text: omnivorous

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: mucus

text: USA:CO:Boulder

text: Rana Catesbiana 1

text: adult

text: frog metagenome

text: UCSDMI

text: TRUE

text: TRUE

text: skin

characteristic: sample type

text: frog metagenome

text: male

text: Missing: Not provided


characteristic: ENA-CHECKLIST

text: UCSDMI

text: public

text: Missing: Not provided

text: months

text: UBERON:skin

text: UBERON:mucus

characteristic: body product

text: UBERON:skin

characteristic: body site

text: frog biogeography, dorsal right shoulder

text: omnivorous

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: mucus

text: USA:CO:Boulder

characteristic: geo loc name

text: Rana Catesbiana 1

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

text: adult

characteristic: life stage

characteristic: longitude

text: frog metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: TRUE

characteristic: public

text: skin

text: frog metagenome

text: male

characteristic: sex

characteristic: title

text: Missing: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Not provided

characteristic: age

text: months

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

characteristic: body habitat

text: UBERON:mucus

text: UBERON:skin

text: frog biogeography, ventral right shoulder

characteristic: description

text: omnivorous

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: mucus

text: USA:CO:Boulder

text: Rana Catesbiana 1

text: adult

text: frog metagenome

text: UCSDMI

text: TRUE

text: TRUE

text: skin

characteristic: sample type

text: frog metagenome

text: male

text: Missing: Not provided


characteristic: ENA-CHECKLIST

text: UCSDMI

text: public

text: Missing: Not provided

text: months

text: UBERON:skin

text: UBERON:mucus

characteristic: body product

text: UBERON:skin

characteristic: body site

text: frog biogeography, dorsal right arm

text: omnivorous

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: mucus

text: USA:CO:Boulder

characteristic: geo loc name

text: Rana Catesbiana 1

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

text: adult

characteristic: life stage

characteristic: longitude

text: frog metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: TRUE

characteristic: public

text: skin

text: frog metagenome

text: male

characteristic: sex

characteristic: title

text: Missing: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Not provided

characteristic: age

text: months

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

characteristic: body habitat

text: UBERON:mucus

text: UBERON:skin

text: frog biogeography, ventral right arm

characteristic: description

text: omnivorous

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: mucus

text: USA:CO:Boulder

text: Rana Catesbiana 1

text: adult

text: frog metagenome

text: UCSDMI

text: TRUE

text: TRUE

text: skin

characteristic: sample type

text: frog metagenome

text: male

text: Missing: Not provided


characteristic: ENA-CHECKLIST

text: UCSDMI

text: public

text: Missing: Not provided

text: months

text: UBERON:skin

text: UBERON:mucus

characteristic: body product

text: UBERON:skin

characteristic: body site

text: frog biogeography, dorsal medial head surface in between tympanums

text: omnivorous

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: mucus

text: USA:CO:Boulder

characteristic: geo loc name

text: Rana Catesbiana 1

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

text: adult

characteristic: life stage

characteristic: longitude

text: frog metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: TRUE

characteristic: public

text: skin

text: frog metagenome

text: male

characteristic: sex

characteristic: title

text: Missing: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Not provided

characteristic: age

text: months

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

characteristic: body habitat

text: UBERON:mucus

text: UBERON:skin

text: frog biogeography, ventral medial head surface in between tympanums

characteristic: description

text: omnivorous

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: mucus

text: USA:CO:Boulder

text: Rana Catesbiana 1

text: adult

text: frog metagenome

text: UCSDMI

text: TRUE

text: TRUE

text: skin

characteristic: sample type

text: frog metagenome

text: male

text: Missing: Not provided


characteristic: ENA-CHECKLIST

text: UCSDMI

text: public

text: Missing: Not provided

text: months

text: UBERON:skin

text: UBERON:mucus

characteristic: body product

text: UBERON:skin

characteristic: body site

text: frog biogeography, dorsal right side near tympanum

text: omnivorous

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: mucus

text: USA:CO:Boulder

characteristic: geo loc name

text: Rana Catesbiana 1

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

text: adult

characteristic: life stage

characteristic: longitude

text: frog metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: TRUE

characteristic: public

text: skin

text: frog metagenome

text: male

characteristic: sex

characteristic: title

text: Missing: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Not provided

characteristic: age

text: months

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

characteristic: body habitat

text: UBERON:mucus

text: UBERON:skin

text: frog biogeography, ventral right side near tympanum

characteristic: description

text: omnivorous

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: mucus

text: USA:CO:Boulder

text: Rana Catesbiana 1

text: adult

text: frog metagenome

text: UCSDMI

text: TRUE

text: TRUE

text: skin

characteristic: sample type

text: frog metagenome

text: male

text: Missing: Not provided


characteristic: ENA-CHECKLIST

text: UCSDMI

text: public

text: Missing: Not provided

text: months

text: UBERON:skin

text: UBERON:mucus

characteristic: body product

text: UBERON:skin

characteristic: body site

text: frog biogeography, dorsal left side near tympanum

text: omnivorous

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: mucus

text: USA:CO:Boulder

characteristic: geo loc name

text: Rana Catesbiana 1

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

text: adult

characteristic: life stage

characteristic: longitude

text: frog metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: TRUE

characteristic: public

text: skin

text: frog metagenome

text: male

characteristic: sex

characteristic: title

text: Missing: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Not provided

characteristic: age

text: months

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

characteristic: body habitat

text: UBERON:mucus

text: UBERON:skin

text: frog biogeography, ventral left side near tympanum

characteristic: description

text: omnivorous

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: mucus

text: USA:CO:Boulder

text: Rana Catesbiana 1

text: adult

text: frog metagenome

text: UCSDMI

text: TRUE

text: TRUE

text: skin

characteristic: sample type

text: frog metagenome

text: male

text: Missing: Not provided


characteristic: ENA-CHECKLIST

text: UCSDMI

text: public

text: Missing: Not provided

text: months

text: UBERON:skin

text: UBERON:mucus

characteristic: body product

text: UBERON:skin

characteristic: body site

text: frog biogeography, dorsal right mid-leg

text: omnivorous

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: mucus

text: USA:CO:Boulder

characteristic: geo loc name

text: Rana Catesbiana 1

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

text: adult

characteristic: life stage

characteristic: longitude

text: frog metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: TRUE

characteristic: public

text: skin

text: frog metagenome

text: male

characteristic: sex

characteristic: title

text: Missing: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Not provided

characteristic: age

text: months

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

characteristic: body habitat

text: UBERON:mucus

text: UBERON:skin

text: frog biogeography, ventral right mid-leg

characteristic: description

text: omnivorous

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: mucus

text: USA:CO:Boulder

text: Rana Catesbiana 1

text: adult

text: frog metagenome

text: UCSDMI

text: TRUE

text: TRUE

text: skin

characteristic: sample type

text: frog metagenome

text: male

text: Missing: Not provided


characteristic: ENA-CHECKLIST

text: UCSDMI

text: public

text: Missing: Not provided

text: months

text: UBERON:skin

text: UBERON:mucus

characteristic: body product

text: UBERON:skin

characteristic: body site

text: frog biogeography, dorsal right side near eye

text: omnivorous

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: mucus

text: USA:CO:Boulder

characteristic: geo loc name

text: Rana Catesbiana 1

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

text: adult

characteristic: life stage

characteristic: longitude

text: frog metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: TRUE

characteristic: public

text: skin

text: frog metagenome

text: male

characteristic: sex

characteristic: title

text: Missing: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Not provided

characteristic: age

text: months

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

characteristic: body habitat

text: UBERON:mucus

text: UBERON:skin

text: frog biogeography, ventral right side near eye

characteristic: description

text: omnivorous

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: mucus

text: USA:CO:Boulder

text: Rana Catesbiana 1

text: adult

text: frog metagenome

text: UCSDMI

text: TRUE

text: TRUE

text: skin

characteristic: sample type

text: frog metagenome

text: male

text: Missing: Not provided


characteristic: ENA-CHECKLIST

text: UCSDMI

text: public

text: Missing: Not provided

text: months

text: UBERON:skin

text: UBERON:mucus

characteristic: body product

text: UBERON:skin

characteristic: body site

text: frog biogeography, dorsal left side near eye

text: omnivorous

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: mucus

text: USA:CO:Boulder

characteristic: geo loc name

text: Rana Catesbiana 1

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

text: adult

characteristic: life stage

characteristic: longitude

text: frog metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: TRUE

characteristic: public

text: skin

text: frog metagenome

text: male

characteristic: sex

characteristic: title

text: Missing: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Not provided

characteristic: age

text: months

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

characteristic: body habitat

text: UBERON:mucus

text: UBERON:skin

text: frog biogeography, ventral left side near eye

characteristic: description

text: omnivorous

characteristic: diet

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: mucus

text: USA:CO:Boulder

text: Rana Catesbiana 1

text: adult

text: frog metagenome

text: UCSDMI

text: TRUE

text: TRUE

text: skin

characteristic: sample type

text: frog metagenome

text: male

text: Missing: Not provided