characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: ANAND

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: description

text: Terrestrial

text: Animal house

text: Organic Material

text: India

text: ceacum

text: Chicken

text: host-associated

text: mimarks-survey

text: metagenome

characteristic: organism

text: Tamilnadu organized study

text: metagenome

text: Illumina

text: Chicken Ceacal microbiome

characteristic: title


status: PUBLIC

tag: attribute

characteristic: External Id

text: ANAND

characteristic: INSDC center name

text: public

characteristic: collection date

text: Cecal microbiome of Aseel breed using 16s rRNA, V5-V6 region

text: Terrestrial

characteristic: environment (biome)

text: Animal house

characteristic: environment (feature)

text: Organic Material

characteristic: environment (material)

text: India

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: ceacum

characteristic: host body site

text: Chicken

characteristic: host common name

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: metagenome

text: Tamilnadu unorganized farm study

characteristic: project name

text: metagenome

text: Illumina

characteristic: sequencing method

text: Chicken Ceacal microbiome


E-MTAB-5718:Sample 1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: unspecified

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5718:Sample 1

characteristic: Submitter Id

unit: nanogram

characteristic: amount of dna template

text: ArrayExpress

characteristic: broker name

text: human

characteristic: common name

text: Protocols: The relevant PNA clamps were added at a concentration of 10 µM per PNA clamp, before the initial multiplex PCR amplification with the primer pool. Library generation followed the protocol described in the Ion AmpliSeq Library Kit 2.0 User Guide using the Ion AmpliSeq Cancer Hotspot Panel v2 primer pool, comprising 207 amplicons covering approximately 2,800 COSMIC mutations from 50 oncogenes and tumor suppressor genes.

characteristic: description

text: normal

characteristic: disease

unit: percent

characteristic: kras g12d allelic frequency by ddpcr

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: with peptide nucleic acid clamp

characteristic: presence of peptide nucleic acid clamp

text: Homo sapiens

text: Sample 1

characteristic: title

type: has member


E-MTAB-5718:Sample 2

characteristic: ENA-CHECKLIST

characteristic: External Id

text: unspecified

characteristic: INSDC center name

text: public

text: E-MTAB-5718:Sample 2

text: ArrayExpress

text: human

text: normal

text: Homo sapiens

text: Homo sapiens

text: with peptide nucleic acid clamp

text: Homo sapiens

text: Sample 2


E-MTAB-5718:Sample 3

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: unspecified

characteristic: INSDC first public

text: public

text: E-MTAB-5718:Sample 3

text: ArrayExpress

text: human

text: normal

text: Homo sapiens

text: Homo sapiens

text: with peptide nucleic acid clamp

text: Homo sapiens

text: Sample 3


E-MTAB-5718:Sample 4

text: unspecified

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5718:Sample 4

text: ArrayExpress

text: human

text: normal

text: Homo sapiens

text: Homo sapiens

text: with peptide nucleic acid clamp

text: Homo sapiens

text: Sample 4


E-MTAB-5718:Sample 5

text: unspecified

text: public

text: E-MTAB-5718:Sample 5

characteristic: Submitter Id

characteristic: amount of dna template

text: ArrayExpress

characteristic: broker name

text: human

text: normal

text: Homo sapiens

text: Homo sapiens

text: with peptide nucleic acid clamp

text: Homo sapiens

text: Sample 5


E-MTAB-5718:Sample 6

text: unspecified

text: public

text: E-MTAB-5718:Sample 6

text: ArrayExpress

text: human

characteristic: common name

characteristic: description

text: normal

characteristic: disease

text: Homo sapiens

text: Homo sapiens

text: with peptide nucleic acid clamp

text: Homo sapiens

text: Sample 6


E-MTAB-5718:Sample 7

text: unspecified

text: public

text: E-MTAB-5718:Sample 7

text: ArrayExpress

text: human

text: normal

characteristic: kras g12d allelic frequency by ddpcr

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: with peptide nucleic acid clamp

characteristic: presence of peptide nucleic acid clamp

text: Homo sapiens

text: Sample 7


E-MTAB-5718:Sample 8

characteristic: ENA-CHECKLIST

characteristic: External Id

text: unspecified

text: public

text: E-MTAB-5718:Sample 8

text: ArrayExpress

text: human

text: normal

text: Homo sapiens

text: Homo sapiens

text: with peptide nucleic acid clamp

text: Homo sapiens

text: Sample 8

characteristic: title


E-MTAB-5718:Sample 9

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: unspecified

characteristic: INSDC center name

text: public

text: E-MTAB-5718:Sample 9

text: ArrayExpress

text: human

text: normal

text: Homo sapiens

text: Homo sapiens

text: with peptide nucleic acid clamp

text: Homo sapiens

text: Sample 9


E-MTAB-5718:Sample 10

text: unspecified

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5718:Sample 10

text: ArrayExpress

text: human

text: normal

text: Homo sapiens

text: Homo sapiens

text: without peptide nucleic acid clamp

text: Homo sapiens

text: Sample 10


E-MTAB-5718:Sample 11

text: unspecified

text: public

characteristic: SRA accession

text: E-MTAB-5718:Sample 11

characteristic: Submitter Id

characteristic: amount of dna template

text: ArrayExpress

text: human

text: normal

text: Homo sapiens

text: Homo sapiens

text: without peptide nucleic acid clamp

text: Homo sapiens

text: Sample 11


E-MTAB-5718:Sample 12

text: unspecified

text: public

text: E-MTAB-5718:Sample 12

text: ArrayExpress

characteristic: broker name

text: human

characteristic: common name

characteristic: description

text: normal

text: Homo sapiens

text: Homo sapiens

text: without peptide nucleic acid clamp

text: Homo sapiens

text: Sample 12


E-MTAB-5718:Sample 13

text: unspecified

text: public

text: E-MTAB-5718:Sample 13

text: ArrayExpress

text: human

text: normal

characteristic: disease

characteristic: kras g12d allelic frequency by ddpcr

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: without peptide nucleic acid clamp

text: Homo sapiens

text: Sample 13


E-MTAB-5718:Sample 14

characteristic: ENA-CHECKLIST

characteristic: External Id

text: unspecified

text: public

text: E-MTAB-5718:Sample 14

text: ArrayExpress

text: human

text: normal

text: Homo sapiens

text: Homo sapiens

text: without peptide nucleic acid clamp

characteristic: presence of peptide nucleic acid clamp

text: Homo sapiens

text: Sample 14


E-MTAB-5718:Sample 15

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: unspecified

text: public

text: E-MTAB-5718:Sample 15

text: ArrayExpress

text: human

text: normal

text: Homo sapiens

text: Homo sapiens

text: without peptide nucleic acid clamp

text: Homo sapiens

text: Sample 15

characteristic: title


E-MTAB-5718:Sample 16

text: unspecified

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-5718:Sample 16

text: ArrayExpress

text: human

text: normal

text: Homo sapiens

text: Homo sapiens

text: without peptide nucleic acid clamp

text: Homo sapiens

text: Sample 16


E-MTAB-5718:Sample 17

text: unspecified

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5718:Sample 17

characteristic: Submitter Id

text: ArrayExpress

text: human

text: normal

text: Homo sapiens

text: Homo sapiens

text: without peptide nucleic acid clamp

text: Homo sapiens

text: Sample 17


E-MTAB-5718:Sample 18

text: unspecified

text: public

text: E-MTAB-5718:Sample 18

characteristic: amount of dna template

text: ArrayExpress

characteristic: broker name

text: human

characteristic: common name

text: normal

text: Homo sapiens

text: Homo sapiens

text: without peptide nucleic acid clamp

text: Homo sapiens

text: Sample 18


E-MTAB-5718:Sample 19

text: unspecified

text: public

text: E-MTAB-5718:Sample 19

text: ArrayExpress

text: human

characteristic: description

text: lung cancer

characteristic: disease

characteristic: kras g12d allelic frequency by ddpcr

text: Homo sapiens

text: Homo sapiens

text: with peptide nucleic acid clamp

text: Homo sapiens

text: Sample 19


E-MTAB-5718:Sample 20

characteristic: ENA-CHECKLIST

characteristic: External Id

text: unspecified

text: public

text: E-MTAB-5718:Sample 20

text: ArrayExpress

text: human

text: lung cancer

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: with peptide nucleic acid clamp

text: Homo sapiens

text: Sample 20


E-MTAB-5718:Sample 21

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: unspecified

text: public

text: E-MTAB-5718:Sample 21

text: ArrayExpress

text: human

text: lung cancer

text: Homo sapiens

text: Homo sapiens

text: with peptide nucleic acid clamp

characteristic: presence of peptide nucleic acid clamp

text: Homo sapiens

text: Sample 21


E-MTAB-5718:Sample 22

text: unspecified

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-5718:Sample 22

text: ArrayExpress

text: human

text: lung cancer

text: Homo sapiens

text: Homo sapiens

text: with peptide nucleic acid clamp

text: Homo sapiens

text: Sample 22

characteristic: title


E-MTAB-5718:Sample 23

text: unspecified

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5718:Sample 23

text: ArrayExpress

text: human

text: lung cancer

text: Homo sapiens

text: Homo sapiens

text: with peptide nucleic acid clamp

text: Homo sapiens

text: Sample 23


E-MTAB-5718:Sample 24

text: unspecified

text: public

text: E-MTAB-5718:Sample 24

characteristic: Submitter Id

characteristic: amount of dna template

text: ArrayExpress

characteristic: broker name

text: human

text: lung cancer

text: Homo sapiens

text: Homo sapiens

text: with peptide nucleic acid clamp

text: Homo sapiens

text: Sample 24


E-MTAB-5718:Sample 25

text: unspecified

text: public

text: E-MTAB-5718:Sample 25

text: ArrayExpress

text: human

characteristic: common name

characteristic: description

text: lung cancer

characteristic: disease

text: Homo sapiens

text: Homo sapiens

text: with peptide nucleic acid clamp

text: Homo sapiens

text: Sample 25


E-MTAB-5718:Sample 26

characteristic: ENA-CHECKLIST

characteristic: External Id

text: unspecified

text: public

text: E-MTAB-5718:Sample 26

text: ArrayExpress

text: human

text: lung cancer

characteristic: kras g12d allelic frequency by ddpcr

text: Homo sapiens

text: Homo sapiens

text: with peptide nucleic acid clamp

text: Homo sapiens

text: Sample 26


E-MTAB-5718:Sample 27

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: unspecified

text: public

text: E-MTAB-5718:Sample 27

text: ArrayExpress

text: human

text: lung cancer

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: with peptide nucleic acid clamp

text: Homo sapiens

text: Sample 27


E-MTAB-5718:Sample 28

text: unspecified

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-5718:Sample 28

text: ArrayExpress

text: human

text: lung cancer

text: Homo sapiens

text: Homo sapiens

text: without peptide nucleic acid clamp

characteristic: presence of peptide nucleic acid clamp

text: Homo sapiens

text: Sample 28


E-MTAB-5718:Sample 29

text: unspecified

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5718:Sample 29

text: ArrayExpress

text: human

text: lung cancer

text: Homo sapiens

text: Homo sapiens

text: without peptide nucleic acid clamp

text: Homo sapiens

text: Sample 29

characteristic: title


E-MTAB-5718:Sample 30

text: unspecified

text: public

characteristic: SRA accession

text: E-MTAB-5718:Sample 30

characteristic: Submitter Id

characteristic: amount of dna template

text: ArrayExpress

text: human

text: lung cancer

text: Homo sapiens

text: Homo sapiens

text: without peptide nucleic acid clamp

text: Homo sapiens

text: Sample 30


E-MTAB-5718:Sample 31

text: unspecified

text: public

text: E-MTAB-5718:Sample 31

text: ArrayExpress

characteristic: broker name

text: human

characteristic: common name

characteristic: description

text: lung cancer

text: Homo sapiens

text: Homo sapiens

text: without peptide nucleic acid clamp

text: Homo sapiens

text: Sample 31


E-MTAB-5718:Sample 32

characteristic: ENA-CHECKLIST

characteristic: External Id

text: unspecified

text: public

text: E-MTAB-5718:Sample 32

text: ArrayExpress

text: human

text: lung cancer

characteristic: disease

text: Homo sapiens

text: Homo sapiens

text: without peptide nucleic acid clamp

text: Homo sapiens

text: Sample 32


E-MTAB-5718:Sample 33

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: unspecified

text: public

text: E-MTAB-5718:Sample 33

text: ArrayExpress

text: human

text: lung cancer

characteristic: kras g12d allelic frequency by ddpcr

text: Homo sapiens

text: Homo sapiens

text: without peptide nucleic acid clamp

text: Homo sapiens

text: Sample 33


E-MTAB-5718:Sample 34

text: unspecified

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-5718:Sample 34

text: ArrayExpress

text: human

text: lung cancer

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: without peptide nucleic acid clamp

text: Homo sapiens

text: Sample 34


E-MTAB-5718:Sample 35

text: unspecified

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5718:Sample 35

text: ArrayExpress

text: human

text: lung cancer

text: Homo sapiens

text: Homo sapiens

text: without peptide nucleic acid clamp

characteristic: presence of peptide nucleic acid clamp

text: Homo sapiens

text: Sample 35


E-MTAB-5718:Sample 36

text: unspecified

text: public

characteristic: SRA accession

text: E-MTAB-5718:Sample 36

characteristic: Submitter Id

text: ArrayExpress

text: human

text: lung cancer

text: Homo sapiens

text: Homo sapiens

text: without peptide nucleic acid clamp

text: Homo sapiens

text: Sample 36

characteristic: title


text: BILS

text: public

text: enrichment culture

text: enrichment culture

text: Sample of an oilsands enrichment cultures


text: MPI Tuebingen

text: public

tag: Namespace:MPI Tuebingen

text: maize

characteristic: common name

text: Zea mays subsp. mays

text: Zea mays subsp. mays

text: Archaeological cob from Turkey Pen Shelter, Utah


LB

text: MPI Tuebingen

text: public

text: LB

text: maize

text: Zea mays subsp. mays

text: Zea mays subsp. mays

text: Library blank


EB

text: MPI Tuebingen

text: public

text: EB

text: maize

text: Zea mays subsp. mays

text: Zea mays subsp. mays

text: Extraction blank


text: LIMM

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Liver resection sample


text: unspecified

text: public

text: ArrayExpress

characteristic: broker name

text: neuron

characteristic: cell type

text: house mouse

text: Protocols: Neurons and astrocytes were cultured as described in Bell et al., \Neuronal development is promoted by weakened intrinsic antioxidant defences due to epigenetic repression of Nrf2\, Nature Communications 6: 7066 (2015). Pure neuronal cultures or mixed astrocyte/neuronal cultures were treated ± tBHQ (10 µM) for 8h. At this point RNA was extracted and subject to RNA-seq analysis. RNA-seq libraries were prepared by Edinburgh Genomics using the Illumina TruSeq stranded mRNA-seq kit, according to the manufacturer’s protocol (Illumina).

characteristic: description

text: Co-culture

characteristic: growth condition

text: Mus musculus

text: Mus musculus

text: Mus musculus


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: unspecified

text: public

text: ArrayExpress

text: neuron

text: house mouse

text: Monoculture

text: Mus musculus

text: Mus musculus

text: Mus musculus


characteristic: ENA-LAST-UPDATE

text: Genoscope CEA

characteristic: INSDC center name

text: public

tag: Namespace:Genoscope CEA

text: southern root-knot nematode

text: Meloidogyne incognita

text: Meloidogyne incognita


characteristic: INSDC first public

text: public

tag: Namespace:Centre national de la recherche scientifique

text: Anse Bertrand

text: Guadeloupe

characteristic: locality

text: Aedes aegypti aegypti

characteristic: organism

text: Aedes aegypti aegypti

text: Caribbean invasive population


text: Centre national de la recherche scientifique

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Anse Bertrand

text: Guadeloupe

text: Aedes aegypti aegypti

text: Aedes aegypti aegypti

text: Caribbean invasive population


text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Baie Mahault

text: Guadeloupe

text: Aedes aegypti aegypti

text: Aedes aegypti aegypti

text: Caribbean invasive population


text: public

text: Desirade

text: Guadeloupe

text: Aedes aegypti aegypti

text: Aedes aegypti aegypti

text: Caribbean invasive population

characteristic: title


text: public

text: Saint Francois

text: Guadeloupe

text: Aedes aegypti aegypti

text: Aedes aegypti aegypti

text: Caribbean invasive population


text: public

text: St Barthelemy

text: St Barthelemy

text: Aedes aegypti aegypti

text: Aedes aegypti aegypti

text: Caribbean invasive population


text: public

text: Sandy Ground

text: St Martin

text: Aedes aegypti aegypti

text: Aedes aegypti aegypti

text: Caribbean invasive population


text: public

text: Oyster Pond

text: St Martin

text: Aedes aegypti aegypti

text: Aedes aegypti aegypti

text: Caribbean invasive population


text: public

text: Cayenne

text: Guyane

text: Aedes aegypti aegypti

text: Aedes aegypti aegypti

text: Caribbean invasive population


text: public

text: St Georges

text: Guyane

text: Aedes aegypti aegypti

text: Aedes aegypti aegypti

text: Caribbean invasive population


text: public

text: Ilot Long

text: Martinique

text: Aedes aegypti aegypti

text: Aedes aegypti aegypti

text: Caribbean invasive population


text: public

text: Lamentin

text: Martinique

text: Aedes aegypti aegypti

text: Aedes aegypti aegypti

text: Caribbean invasive population


text: public

text: Riviere Salee

text: Martinique

text: Aedes aegypti aegypti

text: Aedes aegypti aegypti

text: Caribbean invasive population


text: public

text: St Anne

text: Martinique

text: Aedes aegypti aegypti

text: Aedes aegypti aegypti

text: Caribbean invasive population


text: public

text: St Pierre

text: Martinique

text: Aedes aegypti aegypti

text: Aedes aegypti aegypti

text: Caribbean invasive population


text: public

text: Benin

text: Afrique

text: Aedes aegypti aegypti

text: Aedes aegypti aegypti

text: African native population


text: Brain

characteristic: ArrayExpress-PHENOTYPE

text: Mus musculus

characteristic: ArrayExpress-SPECIES

text: SC

text: public

text: house mouse

characteristic: common name

text: Mus musculus

text: Brain

characteristic: phenotype

text: Mus musculus

characteristic: subject id


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: unspecified

text: public

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: epithelial cell

characteristic: cell type

text: human

text: Protocols: HEK293T cells were cultured in Dulbecco’s modified Eagle Medium (DMEM) (Life Technologies) containing 10% fetal bovine serum (Life Technologies), 2 mM glutamine (Life Technologies), 7mM MEM Non-Essential Amino Acids (Life Technologies), 1mM Sodium Pyruvate (Life Technologies), 10mM HEPES,100 units/ml penicillin streptomycin, and 100 μg/ml streptomycin (Life Technologies). Cells were co-transfected with constructs expressing 5’ and 3’ sgRNAs and pBABE-Puro in Opti-MEM® Reduced Serum Medium (Life Technologies) using the Lipofectamine® 3000 Reagent (Life Technologies). Cells were co-transfected in 48 well plates with either 0.75 μg of 5’sgRNA, 0.75 μg, 3’ sgRNA and 0.5 μg pBABE-Puro or 1.5 μg of empty PHI74 vector and 0.5 μg pBABE-Puro. 48 hours after transfection HEK293T cells were cultured for 14 days in the presence of Puromycin (0.75 μg/ml). 72 hours after transfection cells were split onto 10 cm dishes to ensure clonal growth. 10-14 days after splitting, clones were picked, amplified and tested for CRISPR-CaS11-mediated deletion by PCR. Homozygous clones were further amplified. Clones were harvested on different dates and pellets were frozen; however, all samples were processed simultaneously for DNA and RNA extraction (ATAC-seq and RNA-seq), library generation and sequencing. Nuclei were isolated from 50,000 cells and incubated with 2.2 uL Tn5 Transposase (Illumina) for 30 minutes at 37°C DNA was immediately purified using Qiagen MinElute columns Library amplification required 10 cycles and was performed using KAPA Biosystems Real-Time Library Amplification Kit

characteristic: description

text: empty vector

characteristic: genotype

text: Homo sapiens

text: Homo sapiens

text: kidney

characteristic: organism part

text: Homo sapiens


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: unspecified

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: epithelial cell

text: human

text: chr8:579137-581436 deletion

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: kidney

text: Homo sapiens


text: unspecified

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: epithelial cell

text: human

characteristic: common name

text: Protocols: HEK293T cells were cultured in Dulbecco’s modified Eagle Medium (DMEM) (Life Technologies) containing 10% fetal bovine serum (Life Technologies), 2 mM glutamine (Life Technologies), 7mM MEM Non-Essential Amino Acids (Life Technologies), 1mM Sodium Pyruvate (Life Technologies), 10mM HEPES,100 units/ml penicillin streptomycin, and 100 μg/ml streptomycin (Life Technologies). Cells were co-transfected with constructs expressing 5’ and 3’ sgRNAs and pBABE-Puro in Opti-MEM® Reduced Serum Medium (Life Technologies) using the Lipofectamine® 3000 Reagent (Life Technologies). Cells were co-transfected in 48 well plates with either 0.75 μg of 5’sgRNA, 0.75 μg, 3’ sgRNA and 0.5 μg pBABE-Puro or 1.5 μg of empty PHI74 vector and 0.5 μg pBABE-Puro. 48 hours after transfection HEK293T cells were cultured for 14 days in the presence of Puromycin (0.75 μg/ml). 72 hours after transfection cells were split onto 10 cm dishes to ensure clonal growth. 10-14 days after splitting, clones were picked, amplified and tested for CRISPR-CaS11-mediated deletion by PCR. Homozygous clones were further amplified. Clones were harvested on different dates and pellets were frozen; however, all samples were processed simultaneously for DNA and RNA extraction (ATAC-seq and RNA-seq), library generation and sequencing. Total RNA was assessed for quality using an Agilent Tapestation Samples determined to have an RNA Integrity Number (RIN) of 7 or greater were used to generate RNA libraries using Illumina’s TruSeq Stranded Total RNA Sample Prep Kit

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: kidney

text: Homo sapiens

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: unspecified

text: public

text: ArrayExpress

characteristic: broker name

text: epithelial cell

text: human

text: chr8:579137-581436 deletion

text: Homo sapiens

text: Homo sapiens

text: kidney

text: Homo sapiens


text: unspecified

text: public

text: ArrayExpress

characteristic: cell line

text: epithelial cell

characteristic: cell type

text: human

characteristic: description

text: chr20:62115827-62119284 deletion

text: Homo sapiens

text: Homo sapiens

text: kidney

text: Homo sapiens


P + D 1

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF WARWICK

text: public

text: P + D 1

tag: Namespace:UNIVERSITY OF WARWICK

characteristic: collection date

text: Aquatic

characteristic: environment (biome)

text: River

characteristic: environment (feature)

text: Sediment

characteristic: environment (material)

text: India

characteristic: geographic location (country and/or sea)

unit: m

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

text: N 21° 37’17.83’’

characteristic: geographic location (latitude)

text: E 72°58 57.38’’

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sediment metagenome

text: 2189_LIB26299_LDI23538_CGATGT_L007_R2.fastq.gz.md5

characteristic: project name

text: sediment metagenome

text: sediment

characteristic: sediment environmental package

text: Illumina HiSeq

characteristic: sequencing method

text: Lab-enriched river sediments communitites


P + D 2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UNIVERSITY OF WARWICK

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: P + D 2

characteristic: Submitter Id

text: Aquatic

text: River

text: Sediment

text: India

text: N 21° 37’17.83’’

text: E 72°58 57.38’’

text: metagenome

text: sediment metagenome

characteristic: organism

text: sediment metagenome

text: sediment

text: Illumina HiSeq

characteristic: title


P + D 3

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF WARWICK

text: public

text: P + D 3

characteristic: collection date

text: Aquatic

characteristic: environment (biome)

text: River

characteristic: environment (feature)

text: Sediment

characteristic: environment (material)

text: India

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

text: N 21° 37’17.83’’

characteristic: geographic location (latitude)

text: E 72°58 57.38’’

text: metagenome

text: sediment metagenome

text: sediment metagenome

text: sediment

text: Illumina HiSeq


P - D 1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UNIVERSITY OF WARWICK

characteristic: INSDC center name

text: public

text: P - D 1

text: Aquatic

text: River

text: Sediment

text: India

text: N 21° 37’17.83’’

text: E 72°58 57.38’’

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sediment metagenome

characteristic: project name

text: sediment metagenome

text: sediment

characteristic: sediment environmental package

text: Illumina HiSeq

characteristic: sequencing method


P - D 2

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF WARWICK

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: P - D 2

characteristic: Submitter Id

characteristic: collection date

text: Aquatic

text: River

text: Sediment

text: India

text: N 21° 37’17.83’’

text: E 72°58 57.38’’

text: metagenome

text: sediment metagenome

characteristic: organism

text: sediment metagenome

text: sediment

text: Illumina HiSeq

characteristic: title


P - D 3

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF WARWICK

text: public

text: P - D 3

text: Aquatic

characteristic: environment (biome)

text: River

characteristic: environment (feature)

text: Sediment

characteristic: environment (material)

text: India

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

text: N 21° 37’17.83’’

characteristic: geographic location (latitude)

text: E 72°58 57.38’’

text: metagenome

text: sediment metagenome

text: sediment metagenome

text: sediment

text: Illumina HiSeq


C - D 1

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF WARWICK

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: C - D 1

text: Aquatic

text: River

text: Sediment

text: India

text: N 21° 37’17.83’’

text: E 72°58 57.38’’

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sediment metagenome

characteristic: project name

text: sediment metagenome

text: sediment

characteristic: sediment environmental package

text: Illumina HiSeq

characteristic: sequencing method


C - D 2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF WARWICK

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: C - D 2

characteristic: Submitter Id

characteristic: collection date

text: Aquatic

text: River

text: Sediment

text: India

text: N 21° 37’17.83’’

text: E 72°58 57.38’’

text: metagenome

text: sediment metagenome

characteristic: organism

text: sediment metagenome

text: sediment

text: Illumina HiSeq

characteristic: title


C - D 3

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF WARWICK

text: public

text: C - D 3

text: Aquatic

characteristic: environment (biome)

text: River

characteristic: environment (feature)

text: Sediment

characteristic: environment (material)

text: India

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

text: N 21° 37’17.83’’

characteristic: geographic location (latitude)

text: E 72°58 57.38’’

text: metagenome

text: sediment metagenome

text: sediment metagenome

text: sediment

text: Illumina HiSeq


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ILLUMINA, INC.

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:ILLUMINA, INC.

text: human

characteristic: common name

text: CEPH/UTAH PEDIGREE 1341; INTERNATIONAL HAPMAP PROJECT - CEPH (PLATE I) [UTAH RESIDENTS WITH ANCESTRY FROM NORTHERN AND WESTERN EUROPE]; INTERNATIONAL HAPMAP PROJECT - CEPH [UTAH RESIDENTS WITH ANCESTRY FROM NORTHERN AND WESTERN EUROPE]

characteristic: description

text: CEU

characteristic: ethnicity

text: *1 / *1

characteristic: get-rm consensus: cyp1a1

characteristic: get-rm consensus: cyp1a2

characteristic: get-rm consensus: cyp2a6

characteristic: get-rm consensus: cyp2b6

characteristic: get-rm consensus: cyp2c19

characteristic: get-rm consensus: cyp2c8

characteristic: get-rm consensus: cyp2c9

characteristic: get-rm consensus: cyp2d6

text: *1 / *1

characteristic: get-rm consensus: cyp2e1

characteristic: get-rm consensus: cyp3a4

characteristic: get-rm consensus: cyp3a5

characteristic: get-rm consensus: cyp4f2

characteristic: get-rm consensus: dpyd

text: *A / *B

characteristic: get-rm consensus: gstm1

text: *B/*B

characteristic: get-rm consensus: gstp1

characteristic: get-rm consensus: gstt1

text: *4 / *11

characteristic: get-rm consensus: nat1

text: *4/*5 or *5/*6

characteristic: get-rm consensus: nat2

text: *1 / *1

characteristic: get-rm consensus: slc15a2

characteristic: get-rm consensus: slc22a2

characteristic: get-rm consensus: slco1b1

text: WT / WT

characteristic: get-rm consensus: slco2b1

characteristic: get-rm consensus: tpmt

characteristic: get-rm consensus: ugt1a1

characteristic: get-rm consensus: ugt2b15

text: *1 / *2

characteristic: get-rm consensus: ugt2b7

text: AA

characteristic: get-rm consensus: vkorc1 rs9923231 only

text: Homo sapiens

text: NIGMS

characteristic: repository

text: Homo sapiens

text: F

characteristic: sex


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ILLUMINA, INC.

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: CEPH/UTAH PEDIGREE 1340; INTERNATIONAL HAPMAP PROJECT - CEPH (PLATE I) [UTAH RESIDENTS WITH ANCESTRY FROM NORTHERN AND WESTERN EUROPE]; INTERNATIONAL HAPMAP PROJECT - CEPH [UTAH RESIDENTS WITH ANCESTRY FROM NORTHERN AND WESTERN EUROPE]

characteristic: description

text: CEU

characteristic: ethnicity

characteristic: get-rm consensus: cyp2b6

characteristic: get-rm consensus: cyp2c19

text: *1 / *1

characteristic: get-rm consensus: cyp2c8

characteristic: get-rm consensus: cyp2c9

text: *9/*2 (*35)

characteristic: get-rm consensus: cyp2d6

characteristic: get-rm consensus: cyp3a4

characteristic: get-rm consensus: cyp3a5

text: *1 / *1

characteristic: get-rm consensus: dpyd

text: GA

text: Homo sapiens

characteristic: organism

text: NIGMS

text: Homo sapiens

text: F

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ILLUMINA, INC.

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: human

text: CEPH/UTAH PEDIGREE 1340; HUMAN VARIATION PANEL - EUROPEAN CAUCASIAN PANEL OF 16; HUMAN VARIATION PANEL - EUROPEAN CAUCASIAN PANEL OF 24; HUMAN VARIATION PANEL - EUROPEAN CAUCASIAN PANEL OF 8; INTERNATIONAL HAPMAP PROJECT - CEPH (PLATE I) [UTAH RESIDENTS WITH ANCESTRY FROM NORTHERN AND WESTERN EUROPE]; INTERNATIONAL HAPMAP PROJECT - CEPH [UTAH RESIDENTS WITH ANCESTRY FROM NORTHERN AND WESTERN EUROPE]

text: CEU

text: *1 / *4

characteristic: get-rm consensus: cyp1a1

characteristic: get-rm consensus: cyp1a2

characteristic: get-rm consensus: cyp2a6

text: *1 / *1

characteristic: get-rm consensus: cyp2e1

characteristic: get-rm consensus: cyp4f2

text: DEL/DEL

characteristic: get-rm consensus: gstm1

text: *B/*B

characteristic: get-rm consensus: gstp1

characteristic: get-rm consensus: gstt1

text: *4 / *4

characteristic: get-rm consensus: nat1

characteristic: get-rm consensus: nat2

text: *1 / *1

characteristic: get-rm consensus: slc15a2

characteristic: get-rm consensus: slc22a2

characteristic: get-rm consensus: slco1b1

text: WT / WT

characteristic: get-rm consensus: slco2b1

characteristic: get-rm consensus: tpmt

characteristic: get-rm consensus: ugt1a1

characteristic: get-rm consensus: ugt2b15

text: *2 / *2

characteristic: get-rm consensus: ugt2b7

text: GG

characteristic: get-rm consensus: vkorc1 rs9923231 only

text: Homo sapiens

text: NIGMS

characteristic: repository

text: Homo sapiens

text: F

characteristic: sex


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ILLUMINA, INC.

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

characteristic: description

text: CEU

characteristic: ethnicity

text: *1 / *1

characteristic: get-rm consensus: cyp1a1

characteristic: get-rm consensus: cyp1a2

characteristic: get-rm consensus: cyp2a6

characteristic: get-rm consensus: cyp2b6

characteristic: get-rm consensus: cyp2c19

characteristic: get-rm consensus: cyp2c8

characteristic: get-rm consensus: cyp2c9

characteristic: get-rm consensus: cyp2d6

text: *1 / *1

characteristic: get-rm consensus: cyp2e1

characteristic: get-rm consensus: cyp3a4

characteristic: get-rm consensus: cyp3a5

characteristic: get-rm consensus: cyp4f2

characteristic: get-rm consensus: dpyd

text: *A / *A

text: *A/*A

text: *4 / *4

text: *4/*5 or *5/*6

text: *1 / *2

text: WT / WT

text: *2 / *2

text: GA

text: Homo sapiens

characteristic: organism

text: NIGMS

text: Homo sapiens

text: M

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ILLUMINA, INC.

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

characteristic: description

text: CEU

text: *1 / *5

text: *1 / *1

text: *A / *A

characteristic: get-rm consensus: gstm1

text: *A/*A

characteristic: get-rm consensus: gstp1

text: (*A/*A)

characteristic: get-rm consensus: gstt1

text: *4 / *17

characteristic: get-rm consensus: nat1

characteristic: get-rm consensus: nat2

text: *1 / *2

characteristic: get-rm consensus: slc15a2

characteristic: get-rm consensus: slc22a2

characteristic: get-rm consensus: slco1b1

text: WT / WT

characteristic: get-rm consensus: slco2b1

characteristic: get-rm consensus: tpmt

characteristic: get-rm consensus: ugt1a1

characteristic: get-rm consensus: ugt2b15

text: *1 / *1

characteristic: get-rm consensus: ugt2b7

text: AA

characteristic: get-rm consensus: vkorc1 rs9923231 only

text: Homo sapiens

text: NIGMS

characteristic: repository

text: Homo sapiens

text: F

characteristic: sex


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ILLUMINA, INC.

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

characteristic: description

text: CEU

characteristic: ethnicity

text: *1 / *1

characteristic: get-rm consensus: cyp1a1

characteristic: get-rm consensus: cyp1a2

characteristic: get-rm consensus: cyp2a6

characteristic: get-rm consensus: cyp2b6

characteristic: get-rm consensus: cyp2c19

characteristic: get-rm consensus: cyp2c8

characteristic: get-rm consensus: cyp2c9

characteristic: get-rm consensus: cyp2d6

text: *1 / *1

characteristic: get-rm consensus: cyp2e1

characteristic: get-rm consensus: cyp3a4

characteristic: get-rm consensus: cyp3a5

characteristic: get-rm consensus: cyp4f2

characteristic: get-rm consensus: dpyd

text: DEL/DEL

text: *A/*B

text: *4 / *4

text: *1 / *2

text: WT / WT

text: *2 / *2

text: GA

text: Homo sapiens

characteristic: organism

text: NIGMS

text: Homo sapiens

text: F

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ILLUMINA, INC.

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: CEPH/UTAH PEDIGREE 1345; HUMAN VARIATION PANEL - EUROPEAN CAUCASIAN PANEL OF 16; HUMAN VARIATION PANEL - EUROPEAN CAUCASIAN PANEL OF 24; HUMAN VARIATION PANEL - EUROPEAN CAUCASIAN PANEL OF 8; INTERNATIONAL HAPMAP PROJECT - CEPH (PLATE I) [UTAH RESIDENTS WITH ANCESTRY FROM NORTHERN AND WESTERN EUROPE]; INTERNATIONAL HAPMAP PROJECT - CEPH [UTAH RESIDENTS WITH ANCESTRY FROM NORTHERN AND WESTERN EUROPE]; SNP500 PANEL

characteristic: description

text: CEU

text: *1 / *1

text: *1 / *7

text: *1 / *9

text: *A / *A

characteristic: get-rm consensus: gstm1

text: *A/*A

characteristic: get-rm consensus: gstp1

text: (*A/*A)

characteristic: get-rm consensus: gstt1

text: *4 / *4

characteristic: get-rm consensus: nat1

characteristic: get-rm consensus: nat2

text: *1 / *2

characteristic: get-rm consensus: slc15a2

characteristic: get-rm consensus: slc22a2

characteristic: get-rm consensus: slco1b1

text: WT / WT

characteristic: get-rm consensus: slco2b1

characteristic: get-rm consensus: tpmt

characteristic: get-rm consensus: ugt1a1

characteristic: get-rm consensus: ugt2b15

text: *1 / *2

characteristic: get-rm consensus: ugt2b7

text: GG

characteristic: get-rm consensus: vkorc1 rs9923231 only

text: Homo sapiens

text: NIGMS

characteristic: repository

text: Homo sapiens

text: F

characteristic: sex


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ILLUMINA, INC.

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: CEPH/UTAH PEDIGREE 1345; INTERNATIONAL HAPMAP PROJECT - CEPH (PLATE I) [UTAH RESIDENTS WITH ANCESTRY FROM NORTHERN AND WESTERN EUROPE]; INTERNATIONAL HAPMAP PROJECT - CEPH [UTAH RESIDENTS WITH ANCESTRY FROM NORTHERN AND WESTERN EUROPE]

characteristic: description

text: CEU

characteristic: ethnicity

text: *1 / *1

characteristic: get-rm consensus: cyp1a1

characteristic: get-rm consensus: cyp1a2

characteristic: get-rm consensus: cyp2a6

characteristic: get-rm consensus: cyp2b6

characteristic: get-rm consensus: cyp2c19

characteristic: get-rm consensus: cyp2c8

characteristic: get-rm consensus: cyp2c9

characteristic: get-rm consensus: cyp2d6

text: (*7) / *7

characteristic: get-rm consensus: cyp2e1

characteristic: get-rm consensus: cyp3a4

characteristic: get-rm consensus: cyp3a5

characteristic: get-rm consensus: cyp4f2

text: *1 / *9

characteristic: get-rm consensus: dpyd

text: DEL/DEL

text: *A/*A

text: *4 / *4

text: *1 / *1

text: WT / WT

text: *1 / *2

text: GG

text: Homo sapiens

characteristic: organism

text: NIGMS

text: Homo sapiens

text: M

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ILLUMINA, INC.

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: CEPH/UTAH PEDIGREE 1408; HUMAN VARIATION PANEL - EUROPEAN CAUCASIAN PANEL OF 16; HUMAN VARIATION PANEL - EUROPEAN CAUCASIAN PANEL OF 24; HUMAN VARIATION PANEL - EUROPEAN CAUCASIAN PANEL OF 8; INTERNATIONAL HAPMAP PROJECT - CEPH (PLATE I) [UTAH RESIDENTS WITH ANCESTRY FROM NORTHERN AND WESTERN EUROPE]; INTERNATIONAL HAPMAP PROJECT - CEPH [UTAH RESIDENTS WITH ANCESTRY FROM NORTHERN AND WESTERN EUROPE]; SNP500 PANEL

characteristic: description

text: CEU

text: *1 / *1

text: *1 / *7

text: DEL/DEL

characteristic: get-rm consensus: gstm1

text: *A/*A

characteristic: get-rm consensus: gstp1

text: (*A/*A)

characteristic: get-rm consensus: gstt1

text: *4 / *4

characteristic: get-rm consensus: nat1

characteristic: get-rm consensus: nat2

text: *1 / *2

characteristic: get-rm consensus: slc15a2

characteristic: get-rm consensus: slc22a2

characteristic: get-rm consensus: slco1b1

text: WT / WT

characteristic: get-rm consensus: slco2b1

characteristic: get-rm consensus: tpmt

characteristic: get-rm consensus: ugt1a1

characteristic: get-rm consensus: ugt2b15

characteristic: get-rm consensus: ugt2b17

text: *1 / *2

characteristic: get-rm consensus: ugt2b7

text: AA

characteristic: get-rm consensus: vkorc1 rs9923231 only

text: Homo sapiens

text: NIGMS

characteristic: repository

text: Homo sapiens

text: F

characteristic: sex


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ILLUMINA, INC.

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: CEPH/UTAH PEDIGREE 1334; INTERNATIONAL HAPMAP PROJECT - CEPH (PLATE I) [UTAH RESIDENTS WITH ANCESTRY FROM NORTHERN AND WESTERN EUROPE]; INTERNATIONAL HAPMAP PROJECT - CEPH [UTAH RESIDENTS WITH ANCESTRY FROM NORTHERN AND WESTERN EUROPE]

characteristic: description

text: CEU

characteristic: ethnicity

text: *1 / *1

characteristic: get-rm consensus: cyp1a1

characteristic: get-rm consensus: cyp1a2

characteristic: get-rm consensus: cyp2a6

characteristic: get-rm consensus: cyp2b6

characteristic: get-rm consensus: cyp2c19

characteristic: get-rm consensus: cyp2c8

characteristic: get-rm consensus: cyp2c9

characteristic: get-rm consensus: cyp2d6

text: *1 / *1

characteristic: get-rm consensus: cyp2e1

characteristic: get-rm consensus: cyp3a4

characteristic: get-rm consensus: cyp3a5

characteristic: get-rm consensus: cyp4f2

text: *1 / *9

characteristic: get-rm consensus: dpyd

text: *A / *A

characteristic: get-rm consensus: gstm1

text: *A/*B

text: *4 / *4

text: *1 / *2

text: WT / WT

text: *1 / *2

text: GG

text: Homo sapiens

characteristic: organism

text: NIGMS

text: Homo sapiens

text: F

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ILLUMINA, INC.

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: CEPH/UTAH PEDIGREE 1344; HUMAN VARIATION PANEL - EUROPEAN CAUCASIAN PANEL OF 16; HUMAN VARIATION PANEL - EUROPEAN CAUCASIAN PANEL OF 24; INTERNATIONAL HAPMAP PROJECT - CEPH (PLATE I) [UTAH RESIDENTS WITH ANCESTRY FROM NORTHERN AND WESTERN EUROPE]; INTERNATIONAL HAPMAP PROJECT - CEPH [UTAH RESIDENTS WITH ANCESTRY FROM NORTHERN AND WESTERN EUROPE]

characteristic: description

text: CEU

characteristic: ethnicity

text: *1 / *1

text: *1/*1 (*27)

text: *1 / *1

text: DEL/DEL

text: *A/*C;*B/*D

characteristic: get-rm consensus: gstp1

characteristic: get-rm consensus: gstt1

text: *4 / *4

characteristic: get-rm consensus: nat1

characteristic: get-rm consensus: nat2

text: *1 / *2

characteristic: get-rm consensus: slc15a2

characteristic: get-rm consensus: slc22a2

characteristic: get-rm consensus: slco1b1

text: WT / WT

characteristic: get-rm consensus: slco2b1

characteristic: get-rm consensus: tpmt

characteristic: get-rm consensus: ugt1a1

characteristic: get-rm consensus: ugt2b15

characteristic: get-rm consensus: ugt2b17

text: *2 / *2

characteristic: get-rm consensus: ugt2b7

text: GA

characteristic: get-rm consensus: vkorc1 rs9923231 only

text: Homo sapiens

text: NIGMS

characteristic: repository

text: Homo sapiens

text: M

characteristic: sex


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ILLUMINA, INC.

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: CEPH/UTAH PEDIGREE 1349; CYTOCHROME P450, SUBFAMILY IIC, POLYPEPTIDE 19; CYP2C19; HUMAN VARIATION PANEL - EUROPEAN CAUCASIAN PANEL OF 24; INTERNATIONAL HAPMAP PROJECT - CEPH (PLATE I) [UTAH RESIDENTS WITH ANCESTRY FROM NORTHERN AND WESTERN EUROPE]; INTERNATIONAL HAPMAP PROJECT - CEPH [UTAH RESIDENTS WITH ANCESTRY FROM NORTHERN AND WESTERN EUROPE]

characteristic: description

text: CEU

characteristic: ethnicity

text: *1 / *1

characteristic: get-rm consensus: cyp1a1

characteristic: get-rm consensus: cyp1a2

characteristic: get-rm consensus: cyp2a6

characteristic: get-rm consensus: cyp2b6

characteristic: get-rm consensus: cyp2c19

characteristic: get-rm consensus: cyp2c8

characteristic: get-rm consensus: cyp2c9

characteristic: get-rm consensus: cyp2d6

text: *1 / *1

characteristic: get-rm consensus: cyp2e1

characteristic: get-rm consensus: cyp3a4

characteristic: get-rm consensus: cyp3a5

characteristic: get-rm consensus: cyp4f2

characteristic: get-rm consensus: dpyd

text: DEL/DEL

characteristic: get-rm consensus: gstm1

text: *A/*C;*B/*D

text: (*A/*A)

text: *4 / *17

text: *2 / *2

text: WT / WT

text: *1 / *1

text: GA

text: Homo sapiens

characteristic: organism

text: NIGMS

text: Homo sapiens

text: F

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ILLUMINA, INC.

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: CEPH/UTAH PEDIGREE 1350; INTERNATIONAL HAPMAP PROJECT - CEPH (PLATE I) [UTAH RESIDENTS WITH ANCESTRY FROM NORTHERN AND WESTERN EUROPE]; INTERNATIONAL HAPMAP PROJECT - CEPH [UTAH RESIDENTS WITH ANCESTRY FROM NORTHERN AND WESTERN EUROPE]

characteristic: description

text: CEU

characteristic: ethnicity

text: *1 / *1

text: *1/*3 (*18)

text: *1 / *1

text: DEL/DEL

text: *A/*B

characteristic: get-rm consensus: gstp1

characteristic: get-rm consensus: gstt1

text: *4 / *4

characteristic: get-rm consensus: nat1

characteristic: get-rm consensus: nat2

text: *1 / *2

characteristic: get-rm consensus: slc15a2

characteristic: get-rm consensus: slc22a2

characteristic: get-rm consensus: slco1b1

text: WT / WT

characteristic: get-rm consensus: slco2b1

characteristic: get-rm consensus: tpmt

characteristic: get-rm consensus: ugt1a1

characteristic: get-rm consensus: ugt2b15

text: *1 / *2

characteristic: get-rm consensus: ugt2b7

text: GG

characteristic: get-rm consensus: vkorc1 rs9923231 only

text: Homo sapiens

text: NIGMS

characteristic: repository

text: Homo sapiens

text: F

characteristic: sex


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ILLUMINA, INC.

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: CEPH/UTAH PEDIGREE 1349; INTERNATIONAL HAPMAP PROJECT - CEPH (PLATE I) [UTAH RESIDENTS WITH ANCESTRY FROM NORTHERN AND WESTERN EUROPE]; INTERNATIONAL HAPMAP PROJECT - CEPH [UTAH RESIDENTS WITH ANCESTRY FROM NORTHERN AND WESTERN EUROPE]

characteristic: description

text: CEU

text: *1 / *1

characteristic: get-rm consensus: cyp1a1

characteristic: get-rm consensus: cyp1a2

characteristic: get-rm consensus: cyp2a6

text: *1/*1 (*15)

characteristic: get-rm consensus: cyp2b6

characteristic: get-rm consensus: cyp2c19

characteristic: get-rm consensus: cyp2c8

text: *2/*3 (*18)

characteristic: get-rm consensus: cyp2c9

characteristic: get-rm consensus: cyp2d6

text: (*5 )/ *7

characteristic: get-rm consensus: cyp2e1

characteristic: get-rm consensus: cyp3a4

characteristic: get-rm consensus: cyp3a5

characteristic: get-rm consensus: cyp4f2

text: *1 / *1

characteristic: get-rm consensus: dpyd

text: DEL/DEL

characteristic: get-rm consensus: gstm1

text: *A/*B

text: *4 / *4

text: *1 / *2

text: WT / WT

text: *1 / *2

text: GA

text: Homo sapiens

characteristic: organism

text: NIGMS

text: Homo sapiens

text: M

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ILLUMINA, INC.

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: CEPH/UTAH PEDIGREE 1362; INTERNATIONAL HAPMAP PROJECT - CEPH (PLATE I) [UTAH RESIDENTS WITH ANCESTRY FROM NORTHERN AND WESTERN EUROPE]; INTERNATIONAL HAPMAP PROJECT - CEPH [UTAH RESIDENTS WITH ANCESTRY FROM NORTHERN AND WESTERN EUROPE]; SNP500 PANEL

characteristic: description

text: CEU

characteristic: ethnicity

text: *1 / *1

text: *1 / *1

text: DEL/DEL

text: *A/*B

characteristic: get-rm consensus: gstp1

characteristic: get-rm consensus: gstt1

text: *4 / *4

characteristic: get-rm consensus: nat1

characteristic: get-rm consensus: nat2

text: *2 / *2

characteristic: get-rm consensus: slc15a2

characteristic: get-rm consensus: slc22a2

characteristic: get-rm consensus: slco1b1

text: WT / WT

characteristic: get-rm consensus: slco2b1

characteristic: get-rm consensus: tpmt

characteristic: get-rm consensus: ugt1a1

characteristic: get-rm consensus: ugt2b15

text: *1 / *2

characteristic: get-rm consensus: ugt2b7

text: GA

characteristic: get-rm consensus: vkorc1 rs9923231 only

text: Homo sapiens

text: NIGMS

characteristic: repository

text: Homo sapiens

text: F

characteristic: sex


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ILLUMINA, INC.

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: CEPH/UTAH PEDIGREE 1420; INTERNATIONAL HAPMAP PROJECT - CEPH (PLATE I) [UTAH RESIDENTS WITH ANCESTRY FROM NORTHERN AND WESTERN EUROPE]; INTERNATIONAL HAPMAP PROJECT - CEPH [UTAH RESIDENTS WITH ANCESTRY FROM NORTHERN AND WESTERN EUROPE]

characteristic: description

text: CEU

text: *1 / *1

characteristic: get-rm consensus: cyp1a1

characteristic: get-rm consensus: cyp1a2

characteristic: get-rm consensus: cyp2a6

characteristic: get-rm consensus: cyp2b6

characteristic: get-rm consensus: cyp2c19

characteristic: get-rm consensus: cyp2c8

characteristic: get-rm consensus: cyp2c9

characteristic: get-rm consensus: cyp2d6

text: *1 / *1

characteristic: get-rm consensus: cyp2e1

characteristic: get-rm consensus: cyp3a4

characteristic: get-rm consensus: cyp3a5

characteristic: get-rm consensus: cyp4f2

characteristic: get-rm consensus: dpyd

text: DEL/DEL

characteristic: get-rm consensus: gstm1

text: *A/*A

text: (*A/*A)

text: *4 / *4

text: *1 / *1

text: WT / WT

text: *1 / *2

text: AA

text: Homo sapiens

characteristic: organism

text: NIGMS

text: Homo sapiens

text: M

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ILLUMINA, INC.

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

characteristic: description

text: CEU

characteristic: ethnicity

text: *1 / *4

text: *1/*1 (*5)

text: *1 / *1

text: *A / *A

text: *A/*A

characteristic: get-rm consensus: gstp1

text: (*A/*A)

characteristic: get-rm consensus: gstt1

text: *4 / *11

characteristic: get-rm consensus: nat1

characteristic: get-rm consensus: nat2

text: *1 / *2

characteristic: get-rm consensus: slc15a2

characteristic: get-rm consensus: slc22a2

characteristic: get-rm consensus: slco1b1

text: WT / WT

characteristic: get-rm consensus: slco2b1

characteristic: get-rm consensus: tpmt

characteristic: get-rm consensus: ugt1a1

characteristic: get-rm consensus: ugt2b15

text: *1 / *1

characteristic: get-rm consensus: ugt2b7

text: GA

characteristic: get-rm consensus: vkorc1 rs9923231 only

text: Homo sapiens

text: NIGMS

characteristic: repository

text: Homo sapiens

text: F

characteristic: sex


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ILLUMINA, INC.

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

characteristic: description

text: CEU

text: *1 / *1

characteristic: get-rm consensus: cyp1a1

characteristic: get-rm consensus: cyp1a2

characteristic: get-rm consensus: cyp2a6

characteristic: get-rm consensus: cyp2b6

characteristic: get-rm consensus: cyp2c19

characteristic: get-rm consensus: cyp2c8

characteristic: get-rm consensus: cyp2c9

characteristic: get-rm consensus: cyp2d6

text: *1 / *1

characteristic: get-rm consensus: cyp2e1

characteristic: get-rm consensus: cyp3a4

characteristic: get-rm consensus: cyp3a5

characteristic: get-rm consensus: cyp4f2

text: *1 / *9

characteristic: get-rm consensus: dpyd

text: DEL/DEL

characteristic: get-rm consensus: gstm1

text: *A/*C;*B/*D

text: *4 / *14

text: *1 / *2

text: WT / WT

text: *1 / *2

text: GA

text: Homo sapiens

characteristic: organism

text: NIGMS

text: Homo sapiens

text: F

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ILLUMINA, INC.

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: CEPH/UTAH PEDIGREE 1408; INTERNATIONAL HAPMAP PROJECT - CEPH (PLATE I) [UTAH RESIDENTS WITH ANCESTRY FROM NORTHERN AND WESTERN EUROPE]; INTERNATIONAL HAPMAP PROJECT - CEPH [UTAH RESIDENTS WITH ANCESTRY FROM NORTHERN AND WESTERN EUROPE]

characteristic: description

text: CEU

characteristic: ethnicity

text: *1 / *2

text: *1 / *1

text: DEL/DEL

text: *A/*B

characteristic: get-rm consensus: gstp1

text: (*A/*A)

characteristic: get-rm consensus: gstt1

text: *4 / *4

characteristic: get-rm consensus: nat1

characteristic: get-rm consensus: nat2

text: *2 / *2

characteristic: get-rm consensus: slc15a2

characteristic: get-rm consensus: slc22a2

characteristic: get-rm consensus: slco1b1

text: WT / WT

characteristic: get-rm consensus: slco2b1

characteristic: get-rm consensus: tpmt

characteristic: get-rm consensus: ugt1a1

characteristic: get-rm consensus: ugt2b15

text: *1 / *2

characteristic: get-rm consensus: ugt2b7

text: GA

characteristic: get-rm consensus: vkorc1 rs9923231 only

text: Homo sapiens

text: NIGMS

characteristic: repository

text: Homo sapiens

text: F

characteristic: sex


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ILLUMINA, INC.

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: CEPH/UTAH PEDIGREE 1358; INTERNATIONAL HAPMAP PROJECT - CEPH (PLATE I) [UTAH RESIDENTS WITH ANCESTRY FROM NORTHERN AND WESTERN EUROPE]; INTERNATIONAL HAPMAP PROJECT - CEPH [UTAH RESIDENTS WITH ANCESTRY FROM NORTHERN AND WESTERN EUROPE]

characteristic: description

text: CEU

text: *1 / *1

characteristic: get-rm consensus: cyp1a1

characteristic: get-rm consensus: cyp1a2

characteristic: get-rm consensus: cyp2a6

characteristic: get-rm consensus: cyp2b6

characteristic: get-rm consensus: cyp2c19

characteristic: get-rm consensus: cyp2c8

characteristic: get-rm consensus: cyp2c9

characteristic: get-rm consensus: cyp2d6

text: *1 / *1

characteristic: get-rm consensus: cyp2e1

characteristic: get-rm consensus: cyp3a4

characteristic: get-rm consensus: cyp3a5

characteristic: get-rm consensus: cyp4f2

text: *1 / *1

characteristic: get-rm consensus: dpyd

text: *A / *A

characteristic: get-rm consensus: gstm1

text: *A/*B

text: (*A/*A)

text: *4 / *4

text: *2 / *2

text: *1 / *2

text: GG

text: Homo sapiens

characteristic: organism

text: NIGMS

text: Homo sapiens

text: F

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ILLUMINA, INC.

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: CEPH/UTAH PEDIGREE 1454; INTERNATIONAL HAPMAP PROJECT - CEPH (PLATE I) [UTAH RESIDENTS WITH ANCESTRY FROM NORTHERN AND WESTERN EUROPE]; INTERNATIONAL HAPMAP PROJECT - CEPH [UTAH RESIDENTS WITH ANCESTRY FROM NORTHERN AND WESTERN EUROPE]; SNP500 PANEL

characteristic: description

text: CEU

characteristic: ethnicity

text: *1 / *2

text: *1/*3 (*18)

text: *1 / *1

text: DEL/DEL

text: *A/*A

characteristic: get-rm consensus: gstp1

text: (*A/*A)

characteristic: get-rm consensus: gstt1

text: *4 / *4

characteristic: get-rm consensus: nat1

text: *4/*5 or *5/*6

characteristic: get-rm consensus: nat2

text: *1 / *2

characteristic: get-rm consensus: slc15a2

characteristic: get-rm consensus: slc22a2

characteristic: get-rm consensus: slco1b1

characteristic: get-rm consensus: slco2b1

characteristic: get-rm consensus: tpmt

characteristic: get-rm consensus: ugt1a1

characteristic: get-rm consensus: ugt2b15

characteristic: get-rm consensus: ugt2b17

text: *1 / *2

characteristic: get-rm consensus: ugt2b7

text: GG

characteristic: get-rm consensus: vkorc1 rs9923231 only

text: Homo sapiens

text: NIGMS

characteristic: repository

text: Homo sapiens

text: F

characteristic: sex


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ILLUMINA, INC.

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: CEPH/UTAH PEDIGREE 1459; INTERNATIONAL HAPMAP PROJECT - CEPH (PLATE I) [UTAH RESIDENTS WITH ANCESTRY FROM NORTHERN AND WESTERN EUROPE]; INTERNATIONAL HAPMAP PROJECT - CEPH [UTAH RESIDENTS WITH ANCESTRY FROM NORTHERN AND WESTERN EUROPE]

characteristic: description

text: CEU

characteristic: ethnicity

text: *1 / *1

characteristic: get-rm consensus: cyp1a1

characteristic: get-rm consensus: cyp1a2

characteristic: get-rm consensus: cyp2a6

characteristic: get-rm consensus: cyp2b6

characteristic: get-rm consensus: cyp2c19

characteristic: get-rm consensus: cyp2c8

characteristic: get-rm consensus: cyp2c9

characteristic: get-rm consensus: cyp2d6

text: *1 / *1

characteristic: get-rm consensus: cyp2e1

characteristic: get-rm consensus: cyp3a4

characteristic: get-rm consensus: cyp3a5

characteristic: get-rm consensus: cyp4f2

characteristic: get-rm consensus: dpyd

text: DEL/DEL

characteristic: get-rm consensus: gstm1

text: *A/*C;*B/*D

text: *4 / *4

text: *1 / *2

text: WT / WT

text: *1 / *2

text: GG

text: Homo sapiens

characteristic: organism

text: NIGMS

text: Homo sapiens

text: F

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ILLUMINA, INC.

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: APPARENTLY HEALTHY NON-FETAL TISSUE; PERSONAL GENOME PROJECT

characteristic: description

text: EUR

characteristic: ethnicity

text: *1 / *1

text: *1 / *1

characteristic: get-rm consensus: slco1b1

characteristic: get-rm consensus: tpmt

text: GA

characteristic: get-rm consensus: vkorc1 rs9923231 only

text: Homo sapiens

text: NIGMS

characteristic: repository

text: Homo sapiens

text: M

characteristic: sex


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Malaghan Institute of Medical Research

text: public

tag: Namespace:Malaghan Institute of Medical Research

text: Christophe Pellefigues

characteristic: collected by

text: house mouse

text: Ear tissue from C57BL/6J mice

text: Mus musculus

characteristic: organism

text: Mus musculus

characteristic: strain

text: Ear

characteristic: tissue type

text: Mmus-ear

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Malaghan Institute of Medical Research

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Christophe Pellefigues

text: house mouse

text: cDNA Extracted from mouse ear

text: Mus musculus

text: Mus musculus

text: Ear

text: Mmus-ear


text: Leishmania donovani

characteristic: ArrayExpress-SPECIES

text: SC

text: public

characteristic: Submitter Id

text: Leishmania donovani

characteristic: common name

text: Leishmania donovani

text: Leishmania donovani

characteristic: subject id


text: Leishmania infantum

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: Leishmania infantum

text: Leishmania infantum

text: Leishmania infantum


text: Plasmodium vivax

text: SC

text: public

text: malaria parasite P. vivax

text: Plasmodium vivax

characteristic: organism

text: Plasmodium vivax


text: ANAND

text: public

characteristic: collection date

text: Cecal microbiome of GCB breed using 16s rRNA, V1-V2 region

characteristic: description

text: Terrestrial

characteristic: environment (biome)

text: Animal house

characteristic: environment (feature)

text: Organic Material

characteristic: environment (material)

text: India

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: ceacum

characteristic: host body site

text: Chicken

characteristic: host common name

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: metagenome

text: Tamilnadu unorganized farm study

characteristic: project name

text: metagenome

text: Illumina

characteristic: sequencing method

text: Chicken Ceacal microbiome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ANAND

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Terrestrial

text: Animal house

text: Organic Material

text: India

text: ceacum

text: Chicken

text: host-associated

text: mimarks-survey

text: metagenome

text: Tamilnadu organized study

text: metagenome

text: Illumina

text: Chicken Ceacal microbiome

characteristic: title


text: ANAND

text: public

characteristic: collection date

text: Cecal microbiome of GCB breed using 16s rRNA, V3-V4 region

characteristic: description

text: Terrestrial

characteristic: environment (biome)

text: Animal house

characteristic: environment (feature)

text: Organic Material

characteristic: environment (material)

text: India

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: ceacum

characteristic: host body site

text: Chicken

characteristic: host common name

text: host-associated

text: mimarks-survey

text: metagenome

characteristic: organism

text: Tamilnadu unorganized farm study

text: metagenome

text: Illumina

text: Chicken Ceacal microbiome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ANAND

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Terrestrial

text: Animal house

text: Organic Material

text: India

text: ceacum

text: Chicken

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: metagenome

text: Tamilnadu organized study

characteristic: project name

text: metagenome

text: Illumina

characteristic: sequencing method

text: Chicken Ceacal microbiome


text: ANAND

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Cecal microbiome of GCB breed using 16s rRNA, V5-V6 region

characteristic: description

text: Terrestrial

characteristic: environment (biome)

text: Animal house

characteristic: environment (feature)

text: Organic Material

characteristic: environment (material)

text: India

characteristic: geographic location (country and/or sea)

text: ceacum

text: Chicken

text: host-associated

text: mimarks-survey

text: metagenome

text: Tamilnadu unorganized farm study

text: metagenome

text: Illumina

text: Chicken Ceacal microbiome

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ANAND

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Terrestrial

text: Animal house

text: Organic Material

text: India

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: ceacum

characteristic: host body site

text: Chicken

characteristic: host common name

text: host-associated

text: mimarks-survey

text: metagenome

characteristic: organism

text: Tamilnadu organized study

text: metagenome

text: Illumina

text: Chicken Ceacal microbiome


text: EMBL EUROPEAN BIOINFORMATICS INSTITUTE

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:EMBL EUROPEAN BIOINFORMATICS INSTITUTE

characteristic: Submitter Id

text: erythroblasts

characteristic: cell type

text: house mouse

characteristic: common name

text: Mus musculus

text: Mus musculus

characteristic: strain

text: Transcriptional profiling of erythroblasts


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EMBL EUROPEAN BIOINFORMATICS INSTITUTE

text: public

text: spermatogonial stem cell line

text: house mouse

text: Mus musculus

text: Mus musculus

text: Transcriptional profiling of spermatogonial stem cell line

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMBL EUROPEAN BIOINFORMATICS INSTITUTE

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