text: EMBL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

characteristic: broker name

text: fruit fly

text: Protocols: Embryos were collected from 4 large cylindrical population cages, each seeded with ~70 g of newly eclosed flies (representing ~70000 flies). After performing three 1 h pre-lays, 3 h embryo collections using 3 standard molasses plates (3g agar, 3g sugar, 30mL apple juice, 100mL water, 1mL propionic acid) streaked with yeast paste) by cages typically yielded 3-5 g dry weight of tightly staged embryos. Cages were maintained at 25C and 60% of hygrometry. Embryos were washed and transfer into large sieves. After dechorionation (2.5 min in 400 ml 3% NaOCl (50% bleach)) embryos were transferred to a Nitex membrane (5x5 cm) to be dried with a paper towel. Then they were placed into a 50 ml Falcon tube with 9.5ml Cross-linking solution (50 mM Hepes, 1 mM EDTA, 0.5 mM EGTA, 100 mM NaCl, pH 8), 485 microl 37% Formaldehyde and 30ml n-Heptane and shaked vigorously at room temperature (20-25C) for 15 min. They were washed once with 30 ml PBS/Glycin/Triton (125 mM glycine, 0.1% Triton in PBS), once with 50 ml ice-cold PBT and suspended in 10 ml PBT (PBS, 0.1% Triton). After drying, cross-linked embryos were freezed in liquid nitrogen and stored at -80C. Cells were mechanically and enzymatically dissociated and sorted using a FACS Aria II (Becton Dickinson) equipped with a 488 nm laser. 50 mg of staged embryos typically retrieved 2 x 104 sorted (cardiac) cells and 50ng of total RNA (Trizol extracted). Then use Oligo-dT beads to extract mRNA. Total RNA (50 ng for each biological replicate) were amplified with Amino Allyl MessageAmp II kit (Applied Biosystems AM1753) and resulting amplified mRNA were used for library preparation.

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Drosophila melanogaster

characteristic: organism

text: Drosophila melanogaster

characteristic: replicate

text: Drosophila melanogaster

text: mixed sex

characteristic: sex

text: Tin-GFP

characteristic: title


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UPSC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Siberian spruce

characteristic: common name

text: Cultivated from germplasm collected in Tomsk Oblast in Russia

characteristic: description

text: Picea obovata

text: Picea obovata

text: Picea obovata cultivated at Mustila Arboretum Finland

type: has member


text: UPSC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Dragon spruce

text: Voucher Liujq-09xz-lzt-190 Lanzhou University Botanical Garden

text: Picea asperata

text: Picea asperata

text: Picea asperata collected from a natural population Sichuan China near 33N 103E


text: UPSC

text: public

characteristic: INSDC status

text: Dragon spruce

text: Voucher 19800139 The Arboretum at Horsholm; cultivated from germplasm collected at 31N 107E

text: Picea asperata

text: Picea asperata

text: Picea asperata cultivated at The Arboretum at Horsholm University of Copenhagen Denmark


text: UPSC

text: public

text: Sargent spruce

text: Voucher 19800139 The Arboretum at Horsholm; cultivated from germplasm collected in Hanyuan Sichuan China

text: Picea brachytyla

text: Picea brachytyla

text: Picea brachytyla cultivated at The Arboretum at Horsholm University of Copenhagen Denmark


text: Animal and Plant Health Agency

text: public

tag: Namespace:Animal and Plant Health Agency

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: healthy

characteristic: host health state

text: porcine

characteristic: host scientific name

characteristic: isolate

text: caecal contents

characteristic: isolation source

text: Moraxella osloensis

text: Moraxella osloensis

text: mcr-1 and mcr-2 variant genes identified in Moraxella species isolated from pigs.


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Animal and Plant Health Agency

text: public

text: Vela AI, Arroyo E, Aragon V et al. Moraxella pluranimalium sp. nov., isolated from animal specimens. International journal of systematic and evolutionary microbiology 2009; 59: 671-4.

text: United Kingdom

text: healthy

text: porcine

text: nasal turbinate

text: Moraxella pluranimalium DSM 22804

characteristic: organism

text: Moraxella pluranimalium DSM 22804

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Animal and Plant Health Agency

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Vela AI, Sanchez-Porro C, Aragon V et al. Moraxella porci sp. nov., isolated from pigs. International journal of systematic and evolutionary microbiology 2010; 60: 2446-50.

text: United Kingdom

text: diseased

text: porcine

text: brain

text: Moraxella porci DSM 25326

text: Moraxella porci DSM 25326


text: Micrococcus luteus

characteristic: ArrayExpress-Species

characteristic: ArrayExpress-StrainOrLine

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Micrococcus luteus

characteristic: common name

text: Micrococcus luteus

text: Micrococcus luteus

characteristic: strain


text: Bacteroides fragilis

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Bacteroides fragilis

text: Bacteroides fragilis

text: Bacteroides fragilis


text: Streptomyces hominis

text: SC

text: public

text: Streptomyces hominis

text: Streptomyces hominis

text: Streptomyces hominis


text: Bacillus mycoides

text: SC

text: public

text: Bacillus mycoides

text: Bacillus mycoides

text: Bacillus mycoides


text: Clostridium novyi

text: SC

text: public

text: Clostridium novyi

text: Clostridium novyi

text: Clostridium novyi


text: Listeria seeligeri

text: SC

text: public

text: Listeria seeligeri

text: Listeria seeligeri

text: Listeria seeligeri


text: Filifactor villosus

text: SC

text: public

text: Filifactor villosus

text: Filifactor villosus

text: Filifactor villosus


name: Illumina sequencing of Elizabethkingia anophelis CIP111067

text: INSTITUT PASTEUR

text: public

tag: Namespace:INSTITUT PASTEUR

text: Elizabethkingia anophelis

text: Elizabethkingia anophelis

text: Illumina sequencing of Elizabethkingia strains


name: Illumina sequencing of Elizabethkingia anophelis CIP60.58

text: INSTITUT PASTEUR

text: public

text: Elizabethkingia anophelis

text: Elizabethkingia anophelis


text: PDRA bioinformatician

text: public

tag: Namespace:PDRA bioinformatician

text: ArrayExpress

characteristic: broker name

text: thale cress

text: Protocols: unopened buds Trizol reagent, Ribo-Zero magnetic kit (MRZPL116) ScriptSeq v2 RNA-seq Library Preparation Kit (SSV21124)

characteristic: description

characteristic: genotype

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Arabidopsis thaliana


name: Illumina sequencing of Elizabethkingia anophelis CIP111046

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: INSTITUT PASTEUR

text: public

text: Elizabethkingia anophelis

characteristic: organism

text: Elizabethkingia anophelis


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: PDRA bioinformatician

text: public

text: ArrayExpress

text: thale cress

text: wild type genotype

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Arabidopsis thaliana

characteristic: title


name: Illumina sequencing of Elizabethkingia meningoseptica CIP111048

text: INSTITUT PASTEUR

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Elizabethkingia meningoseptica

text: Elizabethkingia meningoseptica


name: Illumina sequencing of Elizabethkingia miricola CIP111047

text: INSTITUT PASTEUR

characteristic: INSDC center name

text: public

text: Elizabethkingia miricola

text: Elizabethkingia miricola


text: UNIVERSITY OF VETERINARY MEDICINE

characteristic: INSDC first public

text: public

text: Histomonas meleagridis/Turkey/Austria/2922-C6/04-10x/DH5α

tag: Namespace:UNIVERSITY OF VETERINARY MEDICINE

text: mono-eukryotic Histomonas meleagridis culture. Propagated in vitro as a monoxenic culture with Escherichia coli DH5α.

text: Histomonas meleagridis

text: Histomonas meleagridis

text: Histomonas meleagridis

text: virulent strain

text: Histomonas meleagridis monoxenic mono-eukaryotic culture


text: UNIVERSITY OF VETERINARY MEDICINE

text: public

text: Histomonas meleagridis/Turkey/Austria/2922-C6/04-290x/DH5α

text: Histomonas meleagridis

text: Histomonas meleagridis

text: Histomonas meleagridis

text: attenuated strain


text: UPSC

text: public

text: Brewer spruce

characteristic: common name

text: Voucher 19760302 The Arboretum at Horsholm; cultivated from germplasm collected in Siskiyou Mountains California USA

text: Picea breweriana

text: Picea breweriana

text: Picea breweriana cultivated at The Arboretum at Horsholm University of Copenhagen Denmark


text: UPSC

text: public

text: Chihuahua spruce

text: Voucher 19880553 The Arboretum at Horsholm; cultivated from germplasm collected in Creel Chihuahua Mexico

text: Picea chihuahuana

text: Picea chihuahuana

text: Picea chihuahuana cultivated at The Arboretum at Horsholm University of Copenhagen Denmark


text: UPSC

text: public

text: Qinghai spruce

text: Voucher 827 Lanzhou University Botanical Garden

text: Picea crassifolia

text: Picea crassifolia

text: Picea crassifolia collected from a natural population Inner Mongolia China near 39N 106E


text: UPSC

text: public

text: Qinghai spruce

text: Voucher 818 Lanzhou University Botanical Garden

text: Picea crassifolia

text: Picea crassifolia

text: Picea crassifolia collected from a natural population Qinghai China near 34N 98E


text: UDS

text: public

text: 67-588 parental isolate

text: Lachancea kluyveri

text: Lachancea kluyveri


text: UDS

text: public

text: NBRC10955 parental isolate

text: Lachancea kluyveri

text: Lachancea kluyveri


text: IDIBAPS

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: DNA extracted from CLL tumor cells purified from fresh or cryopreserved mononuclear cells using a cocktail of magnetically-labeled antibodies


text: UPSC

text: public

text: Engelmann's spruce

text: Voucher 5915 Rogow Arboretum; cultivated from germplasm from British Columbia Canada near 49N 115W

text: Picea engelmannii

text: Picea engelmannii

text: Picea engelmannii cultivated at Rogow Arboretum Poland


text: UPSC

text: public

text: Engelmann's spruce

text: Voucher 19780230 The Arboretum at Horsholm; cultivated from germplasm collected in Stanley Idaho USA

text: Picea engelmannii

text: Picea engelmannii

text: Picea engelmannii cultivated at The Arboretum at Horsholm University of Copenhagen Denmark; Voucher 19780230


text: UPSC

text: public

text: Engelmann's spruce

text: Voucher 19780241 The Arboretum at Horsholm; cultivated from germplasm collected from White Mountains Arizona USA

text: Picea engelmannii

text: Picea engelmannii

text: Picea engelmannii cultivated at The Arboretum at Horsholm University of Copenhagen Denmark; Voucher 19780241


text: UPSC

text: public

text: Picea farreri

text: Clone of the type specimen

text: Picea farreri

text: Picea farreri

text: Picea farreri cultivated at Westinbirt The National Arboretum UK


text: UPSC

text: public

text: White spruce

text: Voucher 10755 Rogow Arboretum; cultivated from germplasm from Michigan USA

text: Picea glauca

text: Picea glauca

text: Picea glauca cultivated at Rogow Arboretum Poland


text: UPSC

text: public

text: White spruce

text: Voucher 19490210 The Arboretum at Horsholm; cultivated from germplasm collected from Goose Bay Labrador Canada

text: Picea glauca

text: Picea glauca

text: Picea glauca cultivated at The Arboretum at Horsholm University of Copenhagen Denmark; Voucher 19490210


text: UPSC

text: public

text: White spruce

text: Voucher 19820049 The Arboretum at Horsholm; cultivated from germplasm collected in Valdez Alaska USA

text: Picea glauca

text: Picea glauca

text: Picea glauca cultivated at The Arboretum at Horsholm University of Copenhagen Denmark; Voucher 19820049


text: UPSC

text: public

text: Picea glehnii

text: Voucher 13988 Rogow Arboretum; cultivated from germplasm from Lake Busse Sakhalin Russia

text: Picea glehnii

text: Picea glehnii

text: Picea glehnii cultivated at Rogow Arboretum Poland


text: UPSC

text: public

text: Picea glehnii

text: Voucher 19760375 The Arboretum at Horsholm; cultivated from germplasm collected in Daisetsuzan National Park Hokkaido Japan

text: Picea glehnii

text: Picea glehnii

text: Picea glehnii cultivated at The Arboretum at Horsholm University of Copenhagen Denmark


text: University of Wisconsin Madison

text: public

tag: Namespace:University of Wisconsin Madison

characteristic: collection date

text: B6 microbiota transplant recipient

text: animal-associated habitat

characteristic: environment (biome)

text: mammalian-associated habitat

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: HFHS

characteristic: host diet

characteristic: host genotype

characteristic: host gut microbiota

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: mouse gut metagenome

text: Host genotype and gut microbiome modulate insulin secretion and diet-induced metabolic phenotypes

characteristic: project name

text: mouse gut metagenome

text: Illumina HiSeq Rapid 2000

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Wisconsin Madison

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: CAST microbiota transplant recipient

characteristic: description

text: animal-associated habitat

text: mammalian-associated habitat

text: feces

text: USA

text: HFHS

text: CAST/EiJ

text: host-associated

text: metagenome

text: mouse gut metagenome

characteristic: organism

text: mouse gut metagenome

text: Illumina HiSeq Rapid 2000

characteristic: title


text: University of Wisconsin Madison

characteristic: INSDC first public

text: public

characteristic: collection date

text: B6 gut microbiota donor for HF/HS transplant

text: animal-associated habitat

characteristic: environment (biome)

text: mammalian-associated habitat

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: HFHS

characteristic: host diet

characteristic: host genotype

characteristic: host gut microbiota

text: host-associated

text: metagenome

text: mouse gut metagenome

text: mouse gut metagenome

text: Illumina HiSeq Rapid 2000


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Wisconsin Madison

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: cast gut microbiota donor for HF/HS transplant

text: animal-associated habitat

text: mammalian-associated habitat

text: feces

text: USA

text: HFHS

text: CAST/EiJ

text: CAST/EiJ

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: mouse gut metagenome

characteristic: project name

text: mouse gut metagenome

text: Illumina HiSeq Rapid 2000

characteristic: sequencing method


characteristic: INSDC first public

text: public

characteristic: SRA accession

text: E-MTAB-5411:Corynebacterium glutamicum ATCC13032

tag: Namespace:Center for Biotechnology (CeBiTec), Universitat Bielefeld, Universitatsstr. 25, 33615 Bielefeld, Germany

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: Protocols: As far as not specified, C. glutamicum was precultured in LB medium (Sambrook, 2001) supplemented with 56 mM of glucose overnight, washed once with CGXII medium (Eggeling and Bott, 2005) without carbon source and inoculated in CGXII with 222 mM of glucose at initial OD of 1 (600 nm). The OD was measured with UV-1202 spectrophotometer (Shimadzu, Duisburg, Germany) with suitable dilutions. When necessary, IPTG and 25 μg/mL of kanamycin were added. For the growth experiment in BioLector® cultivation system (m2pLabs, Baesweiler, Germany), cells were cultivated in 1 mL of CGXII with 222 mM of glucose using FlowerPlate® (m2pLabs, Baesweiler, Germany) at 30°C, 1,100 rpm. Cell growth was monitored online every 10 min, and the maximum growth rate (h-1) was determined from the growth rates μ (h-1) which were calculated with regression analysis from backscattering light intensity(wavelength of 620 nm) at 20 consecutive measuring points. Total RNA was isolated from two biological replicates using in part a previously reported protocol Ortiz de Orue Lucana and Schrempf (2000) and the RNeasy Mini Kit along with a DNase Kit (both from Qiagen). Briefly, mycelia were washed with 25 mM Tris, pH 7.5. 1 g mycelia was resuspended in a 3 ml-solution of 4 M guanidinthiocyanate, 25 mM sodium citrate, pH 7, 0.5 % laurylsarcosine and 0.1 M 2-mercaptoethanol, and treated with 1 vol. glass beads by vortexing for 3 min. The glass beads and the cell debris were removed by centrifugation. 500 µl of the supernatant were used for isolation according to the protocols described in the RNeasy Mini and DNase Kit. The quality of the RNA was controlled on a 2 % agarose gel, and it was tested for possible DNA contaminations by PCR. RNA concentrations and quality were determined using Trinean Xpose (Gentbrugge, Belgium) and Agilent RNA Nano 6000 kit on Agilent 2100 Bioanalyzer (Agilent Technologies, Böblingen, Germany). Ribo-Zero rRNA Removal Kit (Bacteria) from Illumina (San Diego, CA, USA) was used to deplete ribosomal RNA. The quality of rRNA-depleted RNA samples was checked on Agilent 2100 Bioanalyzer. TruSeq® Stranded mRNA low sample protocolILLUMINA PROPRIETARYPart # 15031047 Rev. DSample Preparation Guide

characteristic: description

text: wild type genotype

characteristic: genotype

text: Corynebacterium glutamicum ATCC 13032

characteristic: organism

text: Corynebacterium glutamicum ATCC 13032

text: Corynebacterium glutamicum ATCC 13032

text: Corynebacterium glutamicum ATCC13032

characteristic: title


name: E-MTAB-5411:Corynebacterium glutamicum DELTA SigD

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Center for Biotechnology (CeBiTec), Universitat Bielefeld, Universitatsstr. 25, 33615 Bielefeld, Germany

text: public

text: ArrayExpress

text: disruption sigD

characteristic: genetic modification

text: disruption sigD

text: Corynebacterium glutamicum ATCC 13032

text: Corynebacterium glutamicum ATCC 13032

text: Corynebacterium glutamicum ATCC 13032

text: Corynebacterium glutamicum DELTA SigD


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5411:Corynebacterium glutamicum pVWx-minus

text: ArrayExpress

text: pVWx::sigD

text: wild type containing pVWx::sigD

text: Corynebacterium glutamicum ATCC 13032

text: Corynebacterium glutamicum ATCC 13032

text: Corynebacterium glutamicum ATCC 13032

text: Corynebacterium glutamicum pVWx-minus


text: public

text: E-MTAB-5411:Corynebacterium glutamicum pVWx-plus

text: ArrayExpress

text: Protocols: As far as not specified, C. glutamicum was precultured in LB medium (Sambrook, 2001) supplemented with 56 mM of glucose overnight, washed once with CGXII medium (Eggeling and Bott, 2005) without carbon source and inoculated in CGXII with 222 mM of glucose at initial OD of 1 (600 nm). The OD was measured with UV-1202 spectrophotometer (Shimadzu, Duisburg, Germany) with suitable dilutions. When necessary, IPTG and 25 μg/mL of kanamycin were added. For the growth experiment in BioLector® cultivation system (m2pLabs, Baesweiler, Germany), cells were cultivated in 1 mL of CGXII with 222 mM of glucose using FlowerPlate® (m2pLabs, Baesweiler, Germany) at 30°C, 1,100 rpm. Cell growth was monitored online every 10 min, and the maximum growth rate (h-1) was determined from the growth rates μ (h-1) which were calculated with regression analysis from backscattering light intensity(wavelength of 620 nm) at 20 consecutive measuring points. 50 μM of IPTG Total RNA was isolated from two biological replicates using in part a previously reported protocol Ortiz de Orue Lucana and Schrempf (2000) and the RNeasy Mini Kit along with a DNase Kit (both from Qiagen). Briefly, mycelia were washed with 25 mM Tris, pH 7.5. 1 g mycelia was resuspended in a 3 ml-solution of 4 M guanidinthiocyanate, 25 mM sodium citrate, pH 7, 0.5 % laurylsarcosine and 0.1 M 2-mercaptoethanol, and treated with 1 vol. glass beads by vortexing for 3 min. The glass beads and the cell debris were removed by centrifugation. 500 µl of the supernatant were used for isolation according to the protocols described in the RNeasy Mini and DNase Kit. The quality of the RNA was controlled on a 2 % agarose gel, and it was tested for possible DNA contaminations by PCR. RNA concentrations and quality were determined using Trinean Xpose (Gentbrugge, Belgium) and Agilent RNA Nano 6000 kit on Agilent 2100 Bioanalyzer (Agilent Technologies, Böblingen, Germany). Ribo-Zero rRNA Removal Kit (Bacteria) from Illumina (San Diego, CA, USA) was used to deplete ribosomal RNA. The quality of rRNA-depleted RNA samples was checked on Agilent 2100 Bioanalyzer. TruSeq® Stranded mRNA low sample protocolILLUMINA PROPRIETARYPart # 15031047 Rev. DSample Preparation Guide

text: pVWx::sigD

text: wild type containing pVWx::sigD

text: Corynebacterium glutamicum ATCC 13032

text: Corynebacterium glutamicum ATCC 13032

text: Corynebacterium glutamicum ATCC 13032

text: Corynebacterium glutamicum pVWx-plus


text: UCSDMI

text: public

characteristic: anonymized name

text: ExtractionTest Plate1 28.3.16.15.KF1 C10

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: water

characteristic: env package

text: sea water

text: TRUE

characteristic: extracted DNA avail now

characteristic: extraction type

text: USA:CA

characteristic: geo loc name

text: TRUE

text: TRUE

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: marine metagenome

text: UCSDMI

text: TRUE

text: TRUE

characteristic: public

text: seawater

characteristic: sample type

text: marine metagenome

text: seawater

characteristic: source

text: Knight lab extraction comparison 2048


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ExtractionTest Plate2 28.3.16.15.KF2 C10

characteristic: description

text: TRUE

text: urban biome

text: research facility

text: water

text: sea water

text: TRUE

text: USA:CA

text: TRUE

text: TRUE

text: marine metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: TRUE

text: seawater

text: marine metagenome

text: seawater

text: Knight lab extraction comparison 2144

characteristic: title


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: anonymized name

text: ExtractionTest Plate3 28.3.16.15.STD C10

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: water

characteristic: env package

text: sea water

text: TRUE

characteristic: extracted DNA avail now

text: .STD

characteristic: extraction type

text: USA:CA

characteristic: geo loc name

text: TRUE

text: TRUE

characteristic: host subject id

text: marine metagenome

text: UCSDMI

text: TRUE

text: TRUE

text: seawater

text: marine metagenome

text: seawater

text: Knight lab extraction comparison 2240


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ExtractionTest Plate5 28.3.16.15.TEC C10

text: TRUE

text: urban biome

text: research facility

text: water

text: sea water

text: TRUE

text: .TEC

text: USA:CA

text: TRUE

text: TRUE

characteristic: latitude

characteristic: longitude

text: marine metagenome

text: UCSDMI

text: TRUE

text: TRUE

characteristic: public

text: seawater

characteristic: sample type

text: marine metagenome

text: seawater

characteristic: source

text: Knight lab extraction comparison 2432


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: ExtractionTest Plate4 28.3.16.15.TXM C10

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: water

text: sea water

text: TRUE

text: .TXM

text: USA:CA

text: TRUE

text: TRUE

text: marine metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: TRUE

text: seawater

text: marine metagenome

text: seawater

text: Knight lab extraction comparison 2336

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ExtractionTest Plate1 AM.Dust.1.KF1 E12

text: TRUE

text: urban biome

text: research facility

text: built environment

characteristic: env package

text: dust

text: TRUE

characteristic: extracted DNA avail now

characteristic: extraction type

text: USA:CA

characteristic: geo loc name

text: TRUE

text: TRUE

characteristic: host subject id

text: indoor metagenome

text: UCSDMI

text: TRUE

text: TRUE

text: dust

text: indoor metagenome

text: Dust

text: Knight lab extraction comparison 2074


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: ExtractionTest Plate2 AM.Dust.1.KF2 E12

characteristic: description

text: TRUE

text: urban biome

text: research facility

text: built environment

text: dust

text: TRUE

text: USA:CA

text: TRUE

text: TRUE

characteristic: latitude

characteristic: longitude

text: indoor metagenome

text: UCSDMI

text: TRUE

text: TRUE

characteristic: public

text: dust

characteristic: sample type

text: indoor metagenome

text: Dust

characteristic: source

text: Knight lab extraction comparison 2170


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ExtractionTest Plate3 AM.Dust.1.STD E12

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: built environment

text: dust

text: TRUE

text: .STD

text: USA:CA

text: TRUE

text: TRUE

text: indoor metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: TRUE

text: dust

text: indoor metagenome

text: Dust

characteristic: title

text: Knight lab extraction comparison 2266


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: ExtractionTest Plate5 AM.Dust.1.TEC E12

characteristic: description

text: TRUE

text: urban biome

text: research facility

text: built environment

characteristic: env package

text: dust

text: TRUE

characteristic: extracted DNA avail now

text: .TEC

characteristic: extraction type

text: USA:CA

characteristic: geo loc name

text: TRUE

text: TRUE

characteristic: host subject id

text: indoor metagenome

text: UCSDMI

text: TRUE

text: TRUE

text: dust

text: indoor metagenome

text: Dust

text: Knight lab extraction comparison 2458


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ExtractionTest Plate4 AM.Dust.1.TXM E12

text: TRUE

text: urban biome

text: research facility

text: built environment

text: dust

text: TRUE

text: .TXM

text: USA:CA

text: TRUE

text: TRUE

characteristic: latitude

characteristic: longitude

text: indoor metagenome

text: UCSDMI

text: TRUE

text: TRUE

characteristic: public

text: dust

characteristic: sample type

text: indoor metagenome

text: Dust

characteristic: source

text: Knight lab extraction comparison 2362


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: ExtractionTest Plate1 AM.Dust.2.KF1 F12

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: built environment

text: dust

text: TRUE

text: USA:CA

text: TRUE

text: TRUE

text: indoor metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: TRUE

text: dust

text: indoor metagenome

text: Dust

text: Knight lab extraction comparison 2086

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ExtractionTest Plate2 AM.Dust.2.KF2 F12

text: TRUE

text: urban biome

text: research facility

text: built environment

characteristic: env package

text: dust

text: TRUE

characteristic: extracted DNA avail now

characteristic: extraction type

text: USA:CA

characteristic: geo loc name

text: TRUE

text: TRUE

characteristic: host subject id

text: indoor metagenome

text: UCSDMI

text: TRUE

text: TRUE

text: dust

text: indoor metagenome

text: Dust

text: Knight lab extraction comparison 2182


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: ExtractionTest Plate3 AM.Dust.2.STD F12

characteristic: description

text: TRUE

text: urban biome

text: research facility

text: built environment

text: dust

text: TRUE

text: .STD

text: USA:CA

text: TRUE

text: TRUE

characteristic: latitude

characteristic: longitude

text: indoor metagenome

text: UCSDMI

text: TRUE

text: TRUE

characteristic: public

text: dust

characteristic: sample type

text: indoor metagenome

text: Dust

characteristic: source

text: Knight lab extraction comparison 2278


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ExtractionTest Plate5 AM.Dust.2.TEC F12

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: built environment

text: dust

text: TRUE

text: .TEC

text: USA:CA

text: TRUE

text: TRUE

text: indoor metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: TRUE

text: dust

text: indoor metagenome

text: Dust

text: Knight lab extraction comparison 2470

characteristic: title


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: ExtractionTest Plate4 AM.Dust.2.TXM F12

characteristic: description

text: TRUE

text: urban biome

text: research facility

text: built environment

characteristic: env package

text: dust

text: TRUE

characteristic: extracted DNA avail now

text: .TXM

characteristic: extraction type

text: USA:CA

characteristic: geo loc name

text: TRUE

text: TRUE

characteristic: host subject id

text: indoor metagenome

text: UCSDMI

text: TRUE

text: TRUE

text: dust

text: indoor metagenome

text: Dust

text: Knight lab extraction comparison 2374


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ExtractionTest Plate1 BA13-120.KF1 H9

text: TRUE

text: urban biome

text: research facility

text: sediment

text: marine sediment

text: TRUE

text: USA:CA

text: TRUE

text: TRUE

characteristic: latitude

characteristic: longitude

text: marine sediment metagenome

text: UCSDMI

text: TRUE

text: TRUE

characteristic: public

text: marine sediment

characteristic: sample type

text: marine sediment metagenome

text: marine sediment

characteristic: source

text: Knight lab extraction comparison 2107


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: ExtractionTest Plate2 BA13-120.KF2 H9

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: sediment

text: marine sediment

text: TRUE

text: USA:CA

text: TRUE

text: TRUE

text: marine sediment metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: TRUE

text: marine sediment

text: marine sediment metagenome

text: marine sediment

characteristic: title

text: Knight lab extraction comparison 2203


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ExtractionTest Plate3 BA13-120.STD H9

text: TRUE

text: urban biome

text: research facility

text: sediment

characteristic: env package

text: marine sediment

text: TRUE

characteristic: extracted DNA avail now

text: .STD

characteristic: extraction type

text: USA:CA

characteristic: geo loc name

text: TRUE

text: TRUE

characteristic: host subject id

text: marine sediment metagenome

text: UCSDMI

text: TRUE

text: TRUE

text: marine sediment

text: marine sediment metagenome

text: marine sediment

text: Knight lab extraction comparison 2299


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: ExtractionTest Plate5 BA13-120.TEC H9

characteristic: description

text: TRUE

text: urban biome

text: research facility

text: sediment

text: marine sediment

text: TRUE

text: .TEC

text: USA:CA

text: TRUE

text: TRUE

characteristic: latitude

characteristic: longitude

text: marine sediment metagenome

text: UCSDMI

text: TRUE

text: TRUE

characteristic: public

text: marine sediment

characteristic: sample type

text: marine sediment metagenome

text: marine sediment

characteristic: source

text: Knight lab extraction comparison 2491


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ExtractionTest Plate4 BA13-120.TXM H9

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: sediment

text: marine sediment

text: TRUE

text: .TXM

text: USA:CA

text: TRUE

text: TRUE

text: marine sediment metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: TRUE

text: marine sediment

text: marine sediment metagenome

text: marine sediment

text: Knight lab extraction comparison 2395

characteristic: title


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: ExtractionTest Plate1 BA13-98.KF1 F9

characteristic: description

text: TRUE

text: urban biome

text: research facility

text: sediment

characteristic: env package

text: marine sediment

text: TRUE

characteristic: extracted DNA avail now

characteristic: extraction type

text: USA:CA

characteristic: geo loc name

text: TRUE

text: TRUE

characteristic: host subject id

text: marine sediment metagenome

text: UCSDMI

text: TRUE

text: TRUE

text: marine sediment

text: marine sediment metagenome

text: marine sediment

text: Knight lab extraction comparison 2083


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ExtractionTest Plate2 BA13-98.KF2 F9

text: TRUE

text: urban biome

text: research facility

text: sediment

text: marine sediment

text: TRUE

text: USA:CA

text: TRUE

text: TRUE

characteristic: latitude

characteristic: longitude

text: marine sediment metagenome

text: UCSDMI

text: TRUE

text: TRUE

characteristic: public

text: marine sediment

characteristic: sample type

text: marine sediment metagenome

text: marine sediment

characteristic: source

text: Knight lab extraction comparison 2179


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: ExtractionTest Plate3 BA13-98.STD F9

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: sediment

text: marine sediment

text: TRUE

text: .STD

text: USA:CA

text: TRUE

text: TRUE

text: marine sediment metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: TRUE

text: marine sediment

text: marine sediment metagenome

text: marine sediment

text: Knight lab extraction comparison 2275

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ExtractionTest Plate5 BA13-98.TEC F9

text: TRUE

text: urban biome

text: research facility

text: sediment

characteristic: env package

text: marine sediment

text: TRUE

characteristic: extracted DNA avail now

text: .TEC

characteristic: extraction type

text: USA:CA

characteristic: geo loc name

text: TRUE

text: TRUE

characteristic: host subject id

text: marine sediment metagenome

text: UCSDMI

text: TRUE

text: TRUE

text: marine sediment

text: marine sediment metagenome

text: marine sediment

text: Knight lab extraction comparison 2467


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: ExtractionTest Plate4 BA13-98.TXM F9

characteristic: description

text: TRUE

text: urban biome

text: research facility

text: sediment

text: marine sediment

text: TRUE

text: .TXM

text: USA:CA

text: TRUE

text: TRUE

characteristic: latitude

characteristic: longitude

text: marine sediment metagenome

text: UCSDMI

text: TRUE

text: TRUE

characteristic: public

text: marine sediment

characteristic: sample type

text: marine sediment metagenome

text: marine sediment

characteristic: source

text: Knight lab extraction comparison 2371


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ExtractionTest Plate1 BA13-99.KF1 G9

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: sediment

text: marine sediment

text: TRUE

text: USA:CA

text: TRUE

text: TRUE

text: marine sediment metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: TRUE

text: marine sediment

text: marine sediment metagenome

text: marine sediment

text: Knight lab extraction comparison 2095

characteristic: title


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: ExtractionTest Plate2 BA13-99.KF2 G9

characteristic: description

text: TRUE

text: urban biome

text: research facility

text: sediment

characteristic: env package

text: marine sediment

text: TRUE

characteristic: extracted DNA avail now

characteristic: extraction type

text: USA:CA

characteristic: geo loc name

text: TRUE

text: TRUE

characteristic: host subject id

text: marine sediment metagenome

text: UCSDMI

text: TRUE

text: TRUE

text: marine sediment

text: marine sediment metagenome

text: marine sediment

text: Knight lab extraction comparison 2191


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ExtractionTest Plate3 BA13-99.STD G9

text: TRUE

text: urban biome

text: research facility

text: sediment

text: marine sediment

text: TRUE

text: .STD

text: USA:CA

text: TRUE

text: TRUE

characteristic: latitude

characteristic: longitude

text: marine sediment metagenome

text: UCSDMI

text: TRUE

text: TRUE

characteristic: public

text: marine sediment

characteristic: sample type

text: marine sediment metagenome

text: marine sediment

characteristic: source

text: Knight lab extraction comparison 2287


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: ExtractionTest Plate5 BA13-99.TEC G9

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: sediment

text: marine sediment

text: TRUE

text: .TEC

text: USA:CA

text: TRUE

text: TRUE

text: marine sediment metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: TRUE

text: marine sediment

text: marine sediment metagenome

text: marine sediment

characteristic: title

text: Knight lab extraction comparison 2479


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ExtractionTest Plate4 BA13-99.TXM G9

text: TRUE

text: urban biome

text: research facility

text: sediment

characteristic: env package

text: marine sediment

text: TRUE

characteristic: extracted DNA avail now

text: .TXM

characteristic: extraction type

text: USA:CA

characteristic: geo loc name

text: TRUE

text: TRUE

characteristic: host subject id

text: marine sediment metagenome

text: UCSDMI

text: TRUE

text: TRUE

text: marine sediment

text: marine sediment metagenome

text: marine sediment

text: Knight lab extraction comparison 2383


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: ExtractionTest Plate1 BLANK.KF1 H12

characteristic: description

text: TRUE

text: urban biome

text: research facility

text: misc environment

text: sterile water

text: TRUE

text: USA:CA

text: TRUE

text: TRUE

characteristic: latitude

characteristic: longitude

text: metagenome

text: UCSDMI

text: TRUE

text: TRUE

characteristic: public

text: unclassified metagenome

characteristic: sample type

text: metagenome

text: BLANK

characteristic: source

text: Knight lab extraction comparison 2110


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ExtractionTest Plate2 BLANK.KF2 H12

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: misc environment

text: sterile water

text: TRUE

text: USA:CA

text: TRUE

text: TRUE

text: metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: TRUE

text: unclassified metagenome

text: metagenome

text: BLANK

characteristic: title

text: Knight lab extraction comparison 2206


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: BLANK.STDBLANK

characteristic: anonymized name

text: ExtractionTest Plate3 BLANK.STD H12

characteristic: description

text: TRUE

text: urban biome

text: research facility

text: misc environment

characteristic: env package

text: sterile water

text: TRUE

characteristic: extracted DNA avail now

text: .STD

characteristic: extraction type

text: USA:CA

characteristic: geo loc name

text: TRUE

text: TRUE

text: BLANK.STDBLANK

characteristic: host subject id

text: metagenome

text: UCSDMI

text: TRUE

text: TRUE

text: unclassified metagenome

text: metagenome

text: BLANK

text: Knight lab extraction comparison 2302


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: BLANK.TECBLANK

text: ExtractionTest Plate5 BLANK.TEC H12

text: TRUE

text: urban biome

text: research facility

text: misc environment

text: sterile water

text: TRUE

text: .TEC

text: USA:CA

text: TRUE

text: TRUE

text: BLANK.TECBLANK

characteristic: latitude

characteristic: longitude

text: metagenome

text: UCSDMI

text: TRUE

text: TRUE

characteristic: public

text: unclassified metagenome

characteristic: sample type

text: metagenome

text: BLANK

characteristic: source

text: Knight lab extraction comparison 2494


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: BLANK.TXMBLANK

characteristic: anonymized name

text: ExtractionTest Plate4 BLANK.TXM H12

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: misc environment

text: sterile water

text: TRUE

text: .TXM

text: USA:CA

text: TRUE

text: TRUE

text: BLANK.TXMBLANK

text: metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: TRUE

text: unclassified metagenome

text: metagenome

text: BLANK

characteristic: title

text: Knight lab extraction comparison 2398


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ExtractionTest Plate1 DZ15303.KF1 A5

text: TRUE

text: urban biome

text: research facility

text: host-associated

characteristic: env package

text: feces

text: TRUE

characteristic: extracted DNA avail now

characteristic: extraction type

text: USA:CA

characteristic: geo loc name

text: TRUE

text: TRUE

characteristic: host subject id

text: gut metagenome

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text: TRUE

text: TRUE

text: stool

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text: MBQC

text: Knight lab extraction comparison 2019


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: ExtractionTest Plate2 DZ15303.KF2 A5

characteristic: description

text: TRUE

text: urban biome

text: research facility

text: host-associated

text: feces

text: TRUE

text: USA:CA

text: TRUE

text: TRUE

characteristic: latitude

characteristic: longitude

text: gut metagenome

text: UCSDMI

text: TRUE

text: TRUE

characteristic: public

text: stool

characteristic: sample type

text: gut metagenome

text: MBQC

characteristic: source

text: Knight lab extraction comparison 2115


characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

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text: public

text: ExtractionTest Plate3 DZ15303.STD A5

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: host-associated

text: feces

text: TRUE

text: .STD

text: USA:CA

text: TRUE

text: TRUE

text: gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: TRUE

text: stool

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text: Knight lab extraction comparison 2211

characteristic: title


text: UCSDMI

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characteristic: anonymized name

text: ExtractionTest Plate5 DZ15303.TEC A5

characteristic: description

text: TRUE

text: urban biome

text: research facility

text: host-associated

characteristic: env package

text: feces

text: TRUE

characteristic: extracted DNA avail now

text: .TEC

characteristic: extraction type

text: USA:CA

characteristic: geo loc name

text: TRUE

text: TRUE

characteristic: host subject id

text: gut metagenome

text: UCSDMI

text: TRUE

text: TRUE

text: stool

text: gut metagenome

text: MBQC

text: Knight lab extraction comparison 2403


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ExtractionTest Plate4 DZ15303.TXM A5

text: TRUE

text: urban biome

text: research facility

text: host-associated

text: feces

text: TRUE

text: .TXM

text: USA:CA

text: TRUE

text: TRUE

characteristic: latitude

characteristic: longitude

text: gut metagenome

text: UCSDMI

text: TRUE

text: TRUE

characteristic: public

text: stool

characteristic: sample type

text: gut metagenome

text: MBQC

characteristic: source

text: Knight lab extraction comparison 2307


text: UCSDMI

characteristic: INSDC last update

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characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: ExtractionTest Plate1 DZ15305.0007.KF1 B1

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: host-associated

text: feces

text: TRUE

text: USA:CA

text: TRUE

text: TRUE

text: gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: TRUE

text: stool

text: gut metagenome

text: MBQC

text: Knight lab extraction comparison 2027

characteristic: title


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