E-MTAB-5802:Sample 204

characteristic: External Id

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 204

text: 8 to 10

text: ArrayExpress

text: house mouse

characteristic: common name

characteristic: description

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

characteristic: strain

text: Sample 204


E-MTAB-5802:Sample 208

status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EPFL SV IBI-SV UPDEPLA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5802:Sample 208

tag: Namespace:EPFL SV IBI-SV UPDEPLA

characteristic: Submitter Id

text: 8 to 10

unit: week

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

text: Protocols: Subcutaneous and visceral adipose tissue depots were dissected from male and female 8-12-week-old Pref1-RFP mice into ice cold PBS. The tissue was finely minced using scissors, transferred into collagenase (Sigma-Aldrich #C6885-1G, 2 mg/ml of collagenase buffer (25 mM NaHCO3, 12 mM KH2PO4, 1.2 m MgSO4, 4.8 mM KCl, 120 mM NaCl, 1.4 mM CaCl2, 5 mM Glucose, 2.5% BSA, pH = 7.4)) and incubated for 1 hour at 37_C under agitation. Following a 1 min centrifugation at 400g, at room temperature (RT), floating mature lipid-filled adipocytes were aspirated and the suspension was filtered through a 40 µm cell strainer to ensure a single cell preparation. Next, a red blood cell (RBC) lysis was performed by incubating the pelleted cells in the RBC lysis buffer (154 mM NH4Cl, 10 mM KHCO3, 0.1 mM EDTA) for 5 min, followed by two washes (5 min centrifugations at 400g, RT) with FACS buffer (PBS with 3% foetal bovine serum (FBS) (Gibco #10270-106), 1mM EDTA, 1 % penicillin/streptavidin (P/S) (Gibco #15140122)). The isolated single cell suspension was diluted to 0.75 or 1 * 107 cells/ml with FACS buffer (PBS with 3% FBS, 1mM EDTA, 1% P/S and the following fluorophore-conjugated antibodies were added (in titration-determined quantities): anti-mouse CD31-AF488, anti-mouse CD45-AF488, anti-mouse TER119-AF488 (all BioLegend #303110, #304017 and #116215 respectively) for selecting the Lin- population, anti-mouse SCA1-PE-Cy7 (BioLegend #122513), anti-mouse CD34-BV421 (BioLegend #119321) and anti-mouse CD29- PerCP-efluor710 (eBiosciences #46-0291) to enrich the Lin- population with ASPCs. 1,100 cells (550 RFP+ and 550 RFP-) at the concentration of 200 cells/µl were sorted by FACS directly into the C1 Single-Cell Auto Prep Array IFC 10-17µm chip (Fluidigm #100-5760) for 96 cells with the efficiency of ~10%. The presence of the cells was validated by microscopy visualisation (Olympus Cell Xcellence, objective: UPLFLN 10x/0.30). Single cell capture, lysis, reverse transcription and cDNA amplification were performed using the SMARTer cDNA synthesis kit (Clonetech) and Advantage2PCR kit (Clonetech) with addition of spike in (Ambion), within the IFC inside the the C1 Single-Cell Auto Prep system (Fluidigm) according to manufacturer's specifications. Harvested cDNA from single cells after C1-Autoprep system run were used to make single cell libraries using Nextera XT DNA sample preparation kit (Illumina) utilising 96 dual barcoded indices. Library poolup was performed using AMPure XP beads (Agencourt Biosciences) and single cell libraries were sent for paired end sequencing at the Lausanne Genomics Technology Facility (GTF).

characteristic: genotype

text: pool 3

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

characteristic: phenotype

text: Mus musculus

text: Sample 208

characteristic: title


E-MTAB-5802:Sample 205

characteristic: External Id

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 205

text: 8 to 10

text: ArrayExpress

text: house mouse

characteristic: common name

characteristic: description

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

characteristic: strain

text: Sample 205


E-MTAB-5802:Sample 206

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EPFL SV IBI-SV UPDEPLA

characteristic: INSDC center name

text: public

text: E-MTAB-5802:Sample 206

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 206


E-MTAB-5802:Sample 207

text: EPFL SV IBI-SV UPDEPLA

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5802:Sample 207

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 207


E-MTAB-5802:Sample 209

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 209

characteristic: Submitter Id

text: 8 to 10

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: genotype

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 209


E-MTAB-5802:Sample 210

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 210

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

characteristic: phenotype

text: Mus musculus

text: Sample 210

characteristic: title


E-MTAB-5802:Sample 211

characteristic: External Id

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 211

text: 8 to 10

text: ArrayExpress

text: house mouse

characteristic: common name

characteristic: description

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

characteristic: strain

text: Sample 211


E-MTAB-5802:Sample 212

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EPFL SV IBI-SV UPDEPLA

characteristic: INSDC center name

text: public

text: E-MTAB-5802:Sample 212

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 212


E-MTAB-5802:Sample 213

text: EPFL SV IBI-SV UPDEPLA

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5802:Sample 213

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 213


E-MTAB-5802:Sample 214

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 214

characteristic: Submitter Id

text: 8 to 10

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: genotype

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 214


E-MTAB-5802:Sample 215

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 215

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

characteristic: phenotype

text: Mus musculus

text: Sample 215

characteristic: title


E-MTAB-5802:Sample 216

characteristic: External Id

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 216

text: 8 to 10

text: ArrayExpress

text: house mouse

characteristic: common name

characteristic: description

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

characteristic: strain

text: Sample 216


E-MTAB-5802:Sample 220

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EPFL SV IBI-SV UPDEPLA

characteristic: INSDC center name

text: public

text: E-MTAB-5802:Sample 220

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 220


E-MTAB-5802:Sample 217

text: EPFL SV IBI-SV UPDEPLA

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5802:Sample 217

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 217


E-MTAB-5802:Sample 218

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 218

characteristic: Submitter Id

text: 8 to 10

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: genotype

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 218


E-MTAB-5802:Sample 219

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 219

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

characteristic: phenotype

text: Mus musculus

text: Sample 219

characteristic: title


E-MTAB-5802:Sample 221

characteristic: External Id

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 221

text: 8 to 10

text: ArrayExpress

text: house mouse

characteristic: common name

characteristic: description

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

characteristic: strain

text: Sample 221


E-MTAB-5802:Sample 222

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EPFL SV IBI-SV UPDEPLA

characteristic: INSDC center name

text: public

text: E-MTAB-5802:Sample 222

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 222


E-MTAB-5802:Sample 223

text: EPFL SV IBI-SV UPDEPLA

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5802:Sample 223

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 223


E-MTAB-5802:Sample 224

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 224

characteristic: Submitter Id

text: 8 to 10

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: genotype

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 224


E-MTAB-5802:Sample 225

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 225

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

characteristic: phenotype

text: Mus musculus

text: Sample 225

characteristic: title


E-MTAB-5802:Sample 226

characteristic: External Id

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 226

text: 8 to 10

text: ArrayExpress

text: house mouse

characteristic: common name

characteristic: description

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

characteristic: strain

text: Sample 226


E-MTAB-5802:Sample 227

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EPFL SV IBI-SV UPDEPLA

characteristic: INSDC center name

text: public

text: E-MTAB-5802:Sample 227

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 227


E-MTAB-5802:Sample 228

text: EPFL SV IBI-SV UPDEPLA

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5802:Sample 228

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 228


E-MTAB-5802:Sample 232

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 232

characteristic: Submitter Id

text: 8 to 10

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: genotype

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 232


E-MTAB-5802:Sample 229

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 229

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

characteristic: phenotype

text: Mus musculus

text: Sample 229

characteristic: title


E-MTAB-5802:Sample 230

characteristic: External Id

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 230

text: 8 to 10

text: ArrayExpress

text: house mouse

characteristic: common name

characteristic: description

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

characteristic: strain

text: Sample 230


E-MTAB-5802:Sample 231

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EPFL SV IBI-SV UPDEPLA

characteristic: INSDC center name

text: public

text: E-MTAB-5802:Sample 231

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 231


E-MTAB-5802:Sample 233

text: EPFL SV IBI-SV UPDEPLA

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5802:Sample 233

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 233


E-MTAB-5802:Sample 234

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 234

characteristic: Submitter Id

text: 8 to 10

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: genotype

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 234


E-MTAB-5802:Sample 235

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 235

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

characteristic: phenotype

text: Mus musculus

text: Sample 235

characteristic: title


E-MTAB-5802:Sample 236

characteristic: External Id

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 236

text: 8 to 10

text: ArrayExpress

text: house mouse

characteristic: common name

characteristic: description

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

characteristic: strain

text: Sample 236


E-MTAB-5802:Sample 237

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EPFL SV IBI-SV UPDEPLA

characteristic: INSDC center name

text: public

text: E-MTAB-5802:Sample 237

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 237


E-MTAB-5802:Sample 238

text: EPFL SV IBI-SV UPDEPLA

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5802:Sample 238

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 238


E-MTAB-5802:Sample 239

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 239

characteristic: Submitter Id

text: 8 to 10

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: genotype

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 239


E-MTAB-5802:Sample 240

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 240

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

characteristic: phenotype

text: Mus musculus

text: Sample 240

characteristic: title


E-MTAB-5802:Sample 244

characteristic: External Id

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 244

text: 8 to 10

text: ArrayExpress

text: house mouse

characteristic: common name

characteristic: description

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

characteristic: strain

text: Sample 244


E-MTAB-5802:Sample 241

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EPFL SV IBI-SV UPDEPLA

characteristic: INSDC center name

text: public

text: E-MTAB-5802:Sample 241

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 241


E-MTAB-5802:Sample 242

text: EPFL SV IBI-SV UPDEPLA

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5802:Sample 242

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 242


E-MTAB-5802:Sample 243

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 243

characteristic: Submitter Id

text: 8 to 10

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: genotype

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 243


E-MTAB-5802:Sample 245

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 245

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

characteristic: phenotype

text: Mus musculus

text: Sample 245

characteristic: title


E-MTAB-5802:Sample 246

characteristic: External Id

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 246

text: 8 to 10

text: ArrayExpress

text: house mouse

characteristic: common name

characteristic: description

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

characteristic: strain

text: Sample 246


E-MTAB-5802:Sample 247

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EPFL SV IBI-SV UPDEPLA

characteristic: INSDC center name

text: public

text: E-MTAB-5802:Sample 247

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 247


E-MTAB-5802:Sample 248

text: EPFL SV IBI-SV UPDEPLA

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5802:Sample 248

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 248


E-MTAB-5802:Sample 249

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 249

characteristic: Submitter Id

text: 8 to 10

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: genotype

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 249


E-MTAB-5802:Sample 250

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 250

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

characteristic: phenotype

text: Mus musculus

text: Sample 250

characteristic: title


E-MTAB-5802:Sample 251

characteristic: External Id

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 251

text: 8 to 10

text: ArrayExpress

text: house mouse

characteristic: common name

characteristic: description

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

characteristic: strain

text: Sample 251


E-MTAB-5802:Sample 252

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EPFL SV IBI-SV UPDEPLA

characteristic: INSDC center name

text: public

text: E-MTAB-5802:Sample 252

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 252


E-MTAB-5802:Sample 256

text: EPFL SV IBI-SV UPDEPLA

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5802:Sample 256

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 256


E-MTAB-5802:Sample 253

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 253

characteristic: Submitter Id

text: 8 to 10

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: genotype

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 253


E-MTAB-5802:Sample 254

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 254

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

characteristic: phenotype

text: Mus musculus

text: Sample 254

characteristic: title


E-MTAB-5802:Sample 255

characteristic: External Id

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 255

text: 8 to 10

text: ArrayExpress

text: house mouse

characteristic: common name

characteristic: description

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

characteristic: strain

text: Sample 255


E-MTAB-5802:Sample 257

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EPFL SV IBI-SV UPDEPLA

characteristic: INSDC center name

text: public

text: E-MTAB-5802:Sample 257

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 257


E-MTAB-5802:Sample 258

text: EPFL SV IBI-SV UPDEPLA

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5802:Sample 258

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 258


E-MTAB-5802:Sample 259

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 259

characteristic: Submitter Id

text: 8 to 10

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: genotype

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 259


E-MTAB-5802:Sample 260

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 260

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

characteristic: phenotype

text: Mus musculus

text: Sample 260

characteristic: title


E-MTAB-5802:Sample 261

characteristic: External Id

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 261

text: 8 to 10

text: ArrayExpress

text: house mouse

characteristic: common name

characteristic: description

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

characteristic: strain

text: Sample 261


E-MTAB-5802:Sample 262

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EPFL SV IBI-SV UPDEPLA

characteristic: INSDC center name

text: public

text: E-MTAB-5802:Sample 262

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 262


E-MTAB-5802:Sample 263

text: EPFL SV IBI-SV UPDEPLA

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5802:Sample 263

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 263


E-MTAB-5802:Sample 264

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 264

characteristic: Submitter Id

text: 8 to 10

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: genotype

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 264


E-MTAB-5802:Sample 268

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 268

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

characteristic: phenotype

text: Mus musculus

text: Sample 268

characteristic: title


E-MTAB-5802:Sample 265

characteristic: External Id

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 265

text: 8 to 10

text: ArrayExpress

text: house mouse

characteristic: common name

characteristic: description

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

characteristic: strain

text: Sample 265


E-MTAB-5802:Sample 266

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EPFL SV IBI-SV UPDEPLA

characteristic: INSDC center name

text: public

text: E-MTAB-5802:Sample 266

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 266


E-MTAB-5802:Sample 267

text: EPFL SV IBI-SV UPDEPLA

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5802:Sample 267

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 267


E-MTAB-5802:Sample 269

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 269

characteristic: Submitter Id

text: 8 to 10

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: genotype

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 269


E-MTAB-5802:Sample 270

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 270

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

characteristic: phenotype

text: Mus musculus

text: Sample 270

characteristic: title


E-MTAB-5802:Sample 271

characteristic: External Id

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 271

text: 8 to 10

text: ArrayExpress

text: house mouse

characteristic: common name

characteristic: description

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

characteristic: strain

text: Sample 271


E-MTAB-5802:Sample 272

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EPFL SV IBI-SV UPDEPLA

characteristic: INSDC center name

text: public

text: E-MTAB-5802:Sample 272

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 272


E-MTAB-5802:Sample 273

text: EPFL SV IBI-SV UPDEPLA

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5802:Sample 273

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 273


E-MTAB-5802:Sample 274

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 274

characteristic: Submitter Id

text: 8 to 10

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: genotype

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 274


E-MTAB-5802:Sample 275

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 275

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

characteristic: phenotype

text: Mus musculus

text: Sample 275

characteristic: title


E-MTAB-5802:Sample 276

characteristic: External Id

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 276

text: 8 to 10

text: ArrayExpress

text: house mouse

characteristic: common name

characteristic: description

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

characteristic: strain

text: Sample 276


E-MTAB-5802:Sample 280

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EPFL SV IBI-SV UPDEPLA

characteristic: INSDC center name

text: public

text: E-MTAB-5802:Sample 280

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 280


E-MTAB-5802:Sample 277

text: EPFL SV IBI-SV UPDEPLA

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5802:Sample 277

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 277


E-MTAB-5802:Sample 278

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 278

characteristic: Submitter Id

text: 8 to 10

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: genotype

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 278


E-MTAB-5802:Sample 279

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 279

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

characteristic: phenotype

text: Mus musculus

text: Sample 279

characteristic: title


E-MTAB-5802:Sample 281

characteristic: External Id

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 281

text: 8 to 10

text: ArrayExpress

text: house mouse

characteristic: common name

characteristic: description

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

characteristic: strain

text: Sample 281


E-MTAB-5802:Sample 282

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EPFL SV IBI-SV UPDEPLA

characteristic: INSDC center name

text: public

text: E-MTAB-5802:Sample 282

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 282


E-MTAB-5802:Sample 283

text: EPFL SV IBI-SV UPDEPLA

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5802:Sample 283

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 283


E-MTAB-5802:Sample 284

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 284

characteristic: Submitter Id

text: 8 to 10

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: genotype

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 284


E-MTAB-5802:Sample 285

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 285

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

characteristic: phenotype

text: Mus musculus

text: Sample 285

characteristic: title


E-MTAB-5802:Sample 286

characteristic: External Id

text: EPFL SV IBI-SV UPDEPLA

text: public

text: E-MTAB-5802:Sample 286

text: 8 to 10

text: ArrayExpress

text: house mouse

characteristic: common name

characteristic: description

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

characteristic: strain

text: Sample 286


E-MTAB-5802:Sample 287

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EPFL SV IBI-SV UPDEPLA

characteristic: INSDC center name

text: public

text: E-MTAB-5802:Sample 287

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 287


E-MTAB-5802:Sample 288

text: EPFL SV IBI-SV UPDEPLA

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5802:Sample 288

text: 8 to 10

text: ArrayExpress

text: house mouse

text: pool 3

text: Mus musculus

text: Mus musculus

text: CD45- CD31- TER119- CD34+ CD29+ SCA1+

text: Mus musculus

text: Sample 288


text: Animal and Plant Health Agency (APHA)

text: public

tag: Namespace:Animal and Plant Health Agency (APHA)

characteristic: Submitter Id

characteristic: collection date

text: Salmonella enterica

text: monophasic S.Typhimurium

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: host health state

text: Sus domesticus

characteristic: host scientific name

characteristic: isolate

text: PIG

characteristic: isolation source

text: Salmonella enterica

text: Salmonella enterica

characteristic: serovar

text: Monophasic variant of S.Typhimurium

text: Salmonella isolate


characteristic: External Id

text: Animal and Plant Health Agency (APHA)

text: public

text: Salmonella enterica

characteristic: common name

text: monophasic S.Typhimurium

characteristic: description

text: United Kingdom

text: not provided

text: Bos taurus

text: CATTLE

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Monophasic variant of S.Typhimurium

characteristic: strain

text: Salmonella isolate

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Animal and Plant Health Agency (APHA)

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Salmonella enterica

text: monophasic S.Typhimurium

text: United Kingdom

text: not provided

text: Equus caballus

text: Salmonella enterica

text: Salmonella enterica

text: Monophasic variant of S.Typhimurium

text: Salmonella isolate


text: Animal and Plant Health Agency (APHA)

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Salmonella enterica

text: monophasic S.Typhimurium

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: host health state

text: Felis catus

text: CAT

text: Salmonella enterica

text: Salmonella enterica

text: Monophasic variant of S.Typhimurium

text: Salmonella isolate


characteristic: External Id

text: Animal and Plant Health Agency (APHA)

text: public

text: Salmonella enterica

characteristic: common name

text: monophasic S.Typhimurium

text: United Kingdom

text: not provided

text: Gallus Gallus

characteristic: host scientific name

characteristic: isolate

text: CHICKEN

characteristic: isolation source

text: Salmonella enterica

text: Salmonella enterica

characteristic: serovar

text: Monophasic variant of S.Typhimurium

text: Salmonella isolate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Animal and Plant Health Agency (APHA)

text: public

text: Salmonella enterica

text: monophasic S.Typhimurium

characteristic: description

text: United Kingdom

text: not provided

text: Meleagris

text: TURKEY

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Monophasic variant of S.Typhimurium

characteristic: strain

text: Salmonella isolate

characteristic: title


characteristic: ENA-LAST-UPDATE

text: Animal and Plant Health Agency (APHA)

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Salmonella enterica

text: monophasic S.Typhimurium

text: United Kingdom

text: not provided

text: Ovis aries

text: SHEEP

text: Salmonella enterica

text: Salmonella enterica

text: Monophasic variant of S.Typhimurium

text: Salmonella isolate


CECT 9192T

characteristic: External Id

text: UVEG

text: public

text: CECT 9192T

characteristic: Submitter Id

characteristic: collection date

text: redbanded seabream

characteristic: environment (biome)

text: internal organs of diseased redbanded seabream

characteristic: environment (feature)

text: internal organs of diseased fish

characteristic: environment (material)

text: Spain

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: Photobacterium sp. CECT 9192

text: Whole genome sequencing of Photobacterium andalusiensis CECT 9192, type strain

characteristic: project name

text: Photobacterium sp. CECT 9192

text: Illumina Miseq

characteristic: sequencing method

text: CECT 9192T


CECT 9190T

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UVEG

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: CECT 9190T

text: redbanded seabream

text: internal organs of diseased fish

text: Spain

text: host-associated

text: mimarks-survey

text: Photobacterium sp. CECT 9190

characteristic: organism

text: Whole genome sequencing of Photobacterium malacitana CECT 9190T

text: Photobacterium sp. CECT 9190

text: Illumina Miseq

text: CECT 9190T

characteristic: strain

text: Photobacterium malacitana CECT 9190, type strain

characteristic: title


characteristic: External Id

text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: lactate caproate experiment

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: anaerobic bioreactor

characteristic: env feature

text: misc environment

characteristic: env package

text: organic material

text: USA:NY:Ithaca

characteristic: geo loc name

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: anaerobic digester metagenome

text: 4/24/16 12:00

text: TRUE

text: FALSE

characteristic: public

characteristic: reactor

text: anaerobic fermenter

characteristic: sample type

text: anaerobic digester metagenome

text: lactate reactor experiment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: lactate caproate experiment

text: TRUE

text: urban biome

text: anaerobic bioreactor

text: misc environment

text: organic material

text: USA:NY:Ithaca

text: anaerobic digester metagenome

characteristic: organism

text: 8/29/16 12:00

text: TRUE

text: FALSE

text: anaerobic fermenter

text: anaerobic digester metagenome

characteristic: title

text: lactate reactor experiment


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: lactate caproate experiment

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: anaerobic bioreactor

characteristic: env feature

text: misc environment

text: organic material

text: USA:NY:Ithaca

text: anaerobic digester metagenome

text: 3/11/16 12:00

text: TRUE

text: FALSE

text: anaerobic fermenter

text: anaerobic digester metagenome

text: lactate reactor experiment


text: UCSDMI

text: public

text: lactate caproate experiment

text: TRUE

text: urban biome

text: anaerobic bioreactor

text: misc environment

characteristic: env package

text: organic material

text: USA:NY:Ithaca

characteristic: geo loc name

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: anaerobic digester metagenome

text: 11/22/16 12:00

text: TRUE

text: FALSE

characteristic: public

characteristic: reactor

text: anaerobic fermenter

characteristic: sample type

text: anaerobic digester metagenome

text: lactate reactor experiment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: lactate caproate experiment

text: TRUE

text: urban biome

text: anaerobic bioreactor

text: misc environment

text: organic material

text: USA:NY:Ithaca

text: anaerobic digester metagenome

characteristic: organism

text: 10/17/16 12:00

text: TRUE

text: FALSE

text: anaerobic fermenter

text: anaerobic digester metagenome

text: lactate reactor experiment

characteristic: title


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: lactate caproate experiment

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: anaerobic bioreactor

characteristic: env feature

text: misc environment

text: organic material

text: USA:NY:Ithaca

text: anaerobic digester metagenome

text: 10/3/16 12:00

text: TRUE

text: FALSE

text: anaerobic fermenter

text: anaerobic digester metagenome

text: lactate reactor experiment


text: UCSDMI

text: public

text: lactate caproate experiment

text: TRUE

text: urban biome

text: anaerobic bioreactor

text: misc environment

characteristic: env package

text: organic material

text: USA:NY:Ithaca

characteristic: geo loc name

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: anaerobic digester metagenome

text: 1/13/17 12:00

text: TRUE

text: FALSE

characteristic: public

characteristic: reactor

text: anaerobic fermenter

characteristic: sample type

text: anaerobic digester metagenome

text: lactate reactor experiment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: lactate caproate experiment

text: TRUE

text: urban biome

text: anaerobic bioreactor

text: misc environment

text: organic material

text: USA:NY:Ithaca

text: anaerobic digester metagenome

characteristic: organism

text: 1/7/17 12:00

text: TRUE

text: FALSE

text: anaerobic fermenter

text: anaerobic digester metagenome

text: lactate reactor experiment

characteristic: title


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: acid whey lactate experiment

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: anaerobic bioreactor

characteristic: env feature

text: misc environment

text: organic material

text: USA:NY:Ithaca

text: anaerobic digester metagenome

text: 4/24/16 12:00

text: TRUE

text: FALSE

text: anaerobic fermenter

text: anaerobic digester metagenome

text: lactate reactor experiment


text: UCSDMI

text: public

text: acid whey lactate experiment

text: TRUE

text: urban biome

text: anaerobic bioreactor

text: misc environment

characteristic: env package

text: organic material

text: USA:NY:Ithaca

characteristic: geo loc name

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: anaerobic digester metagenome

text: 12/6/16 12:00

text: TRUE

text: FALSE

characteristic: public

characteristic: reactor

text: anaerobic fermenter

characteristic: sample type

text: anaerobic digester metagenome

text: lactate reactor experiment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: acid whey lactate experiment

text: TRUE

text: urban biome

text: anaerobic bioreactor

text: misc environment

text: organic material

text: USA:NY:Ithaca

text: anaerobic digester metagenome

characteristic: organism

text: 3/17/16 12:00

text: TRUE

text: FALSE

text: anaerobic fermenter

text: anaerobic digester metagenome

characteristic: title

text: lactate reactor experiment


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: acid whey lactate experiment

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: anaerobic bioreactor

characteristic: env feature

text: misc environment

text: organic material

text: USA:NY:Ithaca

text: anaerobic digester metagenome

text: 3/31/16 12:00

text: TRUE

text: FALSE

text: anaerobic fermenter

text: anaerobic digester metagenome

text: lactate reactor experiment


text: UCSDMI

text: public

text: acid whey lactate experiment

text: TRUE

text: urban biome

text: anaerobic bioreactor

text: misc environment

characteristic: env package

text: organic material

text: USA:NY:Ithaca

characteristic: geo loc name

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: anaerobic digester metagenome

text: 11/22/16 12:00

text: TRUE

text: FALSE

characteristic: public

characteristic: reactor

text: anaerobic fermenter

characteristic: sample type

text: anaerobic digester metagenome

text: lactate reactor experiment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: acid whey lactate experiment

text: TRUE

text: urban biome

text: anaerobic bioreactor

text: misc environment

text: organic material

text: USA:NY:Ithaca

text: anaerobic digester metagenome

characteristic: organism

text: 10/17/16 12:00

text: TRUE

text: FALSE

text: anaerobic fermenter

text: anaerobic digester metagenome

text: lactate reactor experiment

characteristic: title


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: acid whey lactate experiment

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: anaerobic bioreactor

characteristic: env feature

text: misc environment

text: organic material

text: USA:NY:Ithaca

text: anaerobic digester metagenome

text: 10/3/16 12:00

text: TRUE

text: FALSE

text: anaerobic fermenter

text: anaerobic digester metagenome

text: lactate reactor experiment


text: UCSDMI

text: public

text: acid whey lactate experiment

text: TRUE

text: urban biome

text: anaerobic bioreactor

text: misc environment

characteristic: env package

text: organic material

text: USA:NY:Ithaca

characteristic: geo loc name

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: anaerobic digester metagenome

text: 1/13/17 12:00

text: TRUE

text: FALSE

characteristic: public

characteristic: reactor

text: anaerobic fermenter

characteristic: sample type

text: anaerobic digester metagenome

text: lactate reactor experiment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: acid whey lactate experiment

text: TRUE

text: urban biome

text: anaerobic bioreactor

text: misc environment

text: organic material

text: USA:NY:Ithaca

text: anaerobic digester metagenome

characteristic: organism

text: 1/7/17 12:00

text: TRUE

text: FALSE

text: anaerobic fermenter

text: anaerobic digester metagenome

characteristic: title

text: lactate reactor experiment


text: INRA Bordeaux

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:INRA Bordeaux

characteristic: Submitter Id

characteristic: description

text: Quercus sp. SW-2017

text: Quercus sp. SW-2017


text: Griffith University

text: public

tag: Namespace:Griffith University

text: Joseph Adelskov

characteristic: collected by

text: Draft genome sequence of isolate Clostridium sp. BSD9I1 produced via WGS sequencing.

text: Australia

characteristic: geographic location (country and/or sea)

text: Bundi, Queensland

characteristic: geographic location (region and locality)

text: Joseph Adelskov

characteristic: identified by

text: Corroded Artesian bore well

characteristic: isolation source

text: 26.075303 S 149.717572 E

characteristic: lat lon

text: Clostridium sp. BSD9I1

text: Clostridium sp. BSD9I1

text: BSD9I1 draft genome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Griffith University

text: public

text: Joseph Adelskov

text: Draft genome sequence of Sphingopyxis sp. P1IMeth2 produced from WGS sequencing.

text: Australia

text: Spring Gully water treatment facility, Roma, Queensland

text: Joseph Adelskov

text: Coal seam gas water treatment pond

text: 25.999488 S 149.0704 E

text: Sphingopyxis sp. P1IMeth2

text: Sphingopyxis sp. P1IMeth2

text: Sphingopyxis sp. P1IMeth2 Draft Genome


characteristic: External Id

text: Griffith University

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Joseph Adelskov

text: Draft genome sequence of Bosea sp. CS1GBMeth4 produced via WGS sequencing.

text: Australia

text: Bundi, Queensland

text: Joseph Adelskov

text: Corroded Artesian bore well

text: 26.075303 S 149.717572 E

text: Bosea sp. CS1GBMeth4

text: Bosea sp. CS1GBMeth4

text: CS1GBMeth4 draft genome


text: Griffith University

characteristic: INSDC last update

text: public

text: Joseph Adelskov

text: Draft genome sequence of Pannonibacter sp. CS1GBFMT1 produced via WGS sequencing.

text: Australia

text: Bundi, Queensland

text: Joseph Adelskov

text: Corroded Artesian bore well

text: 26.075303 S 149.717572 E

text: Pannonibacter sp. CS1GBFMT1

characteristic: organism

text: Pannonibacter sp. CS1GBFMT1

text: CS1GBFMT1 draft genome

characteristic: title


text: Griffith University

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Joseph Adelskov

text: Draft genome sequence of Pannonibacter sp. P2PFMT1 produced via WGS sequencing.

text: Australia

text: Joseph Adelskov

text: Coal seam gas water treatment pond

text: 25.999488 S 149.0704 E

text: Pannonibacter sp. P2PFMT1

text: Pannonibacter sp. P2PFMT1

text: P2PFMT1 draft genome


text: Griffith University

text: public

text: Joseph Adelskov

characteristic: collected by

text: Draft genome sequence of Pannonibacter sp. I15F10I1 produced via WGS sequencing.

characteristic: description

text: Australia

characteristic: geographic location (country and/or sea)

text: Joseph Adelskov

text: Coal seam gas water treatment pond

text: 25.999488 S 149.0704 E

text: Pannonibacter sp. I15F10I1

text: Pannonibacter sp. I15F10I1

text: I15F10I1 draft genome


text: Griffith University

text: public

text: Joseph Adelskov

text: Draft genome sequence of Pannonibacter sp. TSB10GB1 produced via WGS sequencing.

text: Australia

text: Bundi, Queensland

characteristic: geographic location (region and locality)

text: Joseph Adelskov

characteristic: identified by

text: Corroded Artesian bore well

characteristic: isolation source

text: 26.075303 S 149.717572 E

text: Pannonibacter sp. TSB10GB1

text: Pannonibacter sp. TSB10GB1

text: TSB10GB1 draft genome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Griffith University

text: public

text: Joseph Adelskov

text: Draft genome sequence of Stappia sp. TSB10GB4 produced via WGS sequencing.

text: Australia

text: Bundi, Queensland

text: Joseph Adelskov

text: Corroded Artesian bore well

text: 26.075303 S 149.717572 E

characteristic: lat lon

text: Stappia sp. TSB10GB4

text: Stappia sp. TSB10GB4

text: TSB10GB4 draft genome


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Griffith University

characteristic: INSDC center name

text: public

text: Joseph Adelskov

text: Draft genome sequence of Stappia sp. P2PMeth1 produced via WGS sequencing.

text: Australia

text: Joseph Adelskov

text: Coal seam gas water treatment pond

text: 25.999488 S 149.0704 E

text: Stappia sp. P2PMeth1

text: Stappia sp. P2PMeth1

text: P2PMeth1 draft genome


text: Griffith University

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Joseph Adelskov

text: Draft genome sequence of Stappia sp. TSB10P1A produced via WGS sequencing.

text: Australia

text: Joseph Adelskov

text: Coal seam gas water treatment pond

text: 25.999488 S 149.0704 E

text: Stappia sp. TSB10P1A

characteristic: organism

text: Stappia sp. TSB10P1A

text: TSB10P1A draft genome


BcH-CHIPZ

text: Institute of Parasitology Zurich

text: public

characteristic: INSDC status

characteristic: SRA accession

text: BcH-CHIPZ

tag: Namespace:Institute of Parasitology Zurich

text: Babesia canis genome of a virulent Hungarian field isolate (strain BcH-CHIPZ)

text: Babesia canis canis

text: Babesia canis canis

text: BcH-CHIPZ

characteristic: title


text: public

tag: Namespace:Department of Clinical Research, University of Bern, Switzerland.

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: T-helper 1 cell

characteristic: cell type

text: human

characteristic: common name

text: Protocols: Human CD4+ T cells were isolated from PBMC by EasySep positive selection kit (Stemcell Technologies) according to the manufacturer’s instructions. Positively selected CD4+ T cells were stained for subsequent TH cell subset sorting. Total RNA was isolated from TH1, TH2, TH17, and TH9 clones in the resting state with RNAready-kit (AmpTec) according to manufacturer’s instruction. Peripheral Blood Mononuclear Cells (PBMC) were isolated by Ficoll-Plaque Plus (GE Healthcare, UK) density gradient centrifugation. Culture medium consisted of PRMI-1640 with Hepes (GIBCO) supplemented with 5% of heat-inactivated human serum (Swiss Red Cross, Basel, Switzerland), 2mM L-Glutamine (Biochrom), 50U/ml penicillin and 50μg/ml streptomycin (Bioconcept) and 50 IU/ml IL-2 (Roche). T cells were cultured at a density of 0.25-1x105cells/96 well plate in a total volume of 200μL cell culture medium. Illumina TruSeq Stranded mRNA protocol Illumina TruSeq Stranded mRNA protocol

characteristic: description

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: clonal culture

characteristic: growth condition

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: CXCR3+ CCR8- CCR6- CCR4-

characteristic: phenotype

text: Homo sapiens

type: has member


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Department of Clinical Research, University of Bern, Switzerland.

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ArrayExpress

text: T-helper 1 cell

text: human

text: normal

text: wild type genotype

text: clonal culture

text: Homo sapiens

text: Homo sapiens

text: blood

text: CXCR3+ CCR8- CCR6- CCR4-

text: Homo sapiens


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: T-helper 1 cell

text: human

text: normal

text: wild type genotype

text: clonal culture

text: B

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: CXCR3+ CCR8- CCR6- CCR4-

text: Homo sapiens

characteristic: title


text: public

text: ArrayExpress

characteristic: broker name

text: T-helper 17 cell

characteristic: cell type

text: human

characteristic: common name

characteristic: description

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: clonal culture

text: Homo sapiens

text: Homo sapiens

text: blood

text: CXCR3- CCR8- CCR6+ CCR4+

text: Homo sapiens


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: ArrayExpress

text: T-helper 2 cell

text: human

text: normal

text: wild type genotype

text: clonal culture

characteristic: growth condition

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: CXCR3- CCR8- CCR6- CCR4+

characteristic: phenotype

text: Homo sapiens


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: T-helper 2 cell

text: human

text: normal

text: wild type genotype

text: clonal culture

text: K

text: Homo sapiens

text: Homo sapiens

text: blood

text: CXCR3- CCR8- CCR6- CCR4+

text: Homo sapiens


text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: T-helper 2 cell

characteristic: cell type

text: human

text: normal

text: wild type genotype

text: clonal culture

text: L

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: CXCR3- CCR8- CCR6- CCR4+

text: Homo sapiens

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: ArrayExpress

text: T-helper 2 cell

text: human

characteristic: common name

characteristic: description

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: clonal culture

text: M

text: Homo sapiens

text: Homo sapiens

text: blood

text: CXCR3- CCR8- CCR6- CCR4+

text: Homo sapiens


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: ArrayExpress

text: T-helper 9 cell

text: human

text: normal

text: wild type genotype

text: clonal culture

characteristic: growth condition

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: CXCR3- CCR8+ CCR6- CCR4+

characteristic: phenotype

text: Homo sapiens


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: T-helper 9 cell

text: human

text: normal

text: wild type genotype

text: clonal culture

text: C

text: Homo sapiens

text: Homo sapiens

text: blood

text: CXCR3- CCR8+ CCR6- CCR4+

text: Homo sapiens


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: ArrayExpress

characteristic: broker name

text: T-helper 9 cell

characteristic: cell type

text: human

text: normal

text: wild type genotype

text: clonal culture

text: D

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: CXCR3- CCR8+ CCR6- CCR4+

text: Homo sapiens

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: ArrayExpress

text: T-helper 9 cell

text: human

characteristic: common name

characteristic: description

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: clonal culture

text: E

text: Homo sapiens

text: Homo sapiens

text: blood

text: CXCR3- CCR8+ CCR6- CCR4+

text: Homo sapiens


Sample 1

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Sample 1

tag: Namespace:MAX PLANCK INSTITUTE FOR DEVELOPMENTAL BIOLOGY

characteristic: collection date

text: sRNA from C. elegans Adults TAP-treated

text: Adults

characteristic: dev stage

text: Caenorhabditis elegans

text: Caenorhabditis elegans

characteristic: strain

text: yes

characteristic: tap treatment

text: whole worm

characteristic: tissue type

text: CEL1 TAP-treated


Sample 2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: MAX PLANCK INSTITUTE FOR DEVELOPMENTAL BIOLOGY

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Sample 2

characteristic: Submitter Id

text: sRNA from C. elegans Adults untreated

text: Adults

text: Caenorhabditis elegans

text: Caenorhabditis elegans

text: no

text: whole worm

text: CEL1 untreated


Sample 3

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Sample 3

text: sRNA from C. elegans Adults TAP-treated

text: Adults

text: Caenorhabditis elegans

characteristic: organism

text: Caenorhabditis elegans

text: yes

text: whole worm

text: CEL2 TAP-treated

characteristic: title


Sample 4

characteristic: INSDC center name

text: public

text: Sample 4

text: sRNA from C. elegans Adults untreated

characteristic: description

text: Adults

text: Caenorhabditis elegans

text: Caenorhabditis elegans

text: no

text: whole worm

text: CEL2 untreated


Sample 5

characteristic: INSDC first public

text: public

text: Sample 5

characteristic: collection date

text: sRNA from C. elegans Adults TAP-treated

text: Adults

text: Caenorhabditis elegans

text: Caenorhabditis elegans

text: yes

text: whole worm

text: CEL3 TAP-treated


Sample 6

text: public

text: Sample 6

text: sRNA from C. elegans Adults untreated

text: Adults

characteristic: dev stage

text: Caenorhabditis elegans

text: Caenorhabditis elegans

characteristic: strain

text: no

text: whole worm

text: CEL3 untreated


Sample 7

text: public

text: Sample 7

text: sRNA from C. elegans Dauers TAP-treated

text: Dauers

text: Caenorhabditis elegans

text: Caenorhabditis elegans

text: yes

characteristic: tap treatment

text: whole worm

characteristic: tissue type

text: CEL4 TAP-treated


Sample 8

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: Sample 8

text: sRNA from C. elegans Dauers untreated

text: Dauers

text: Caenorhabditis elegans

text: Caenorhabditis elegans

text: no

text: whole worm

text: CEL4 untreated


Sample 9

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Sample 9

text: sRNA from C. elegans Dauers TAP-treated

text: Dauers

text: Caenorhabditis elegans

text: Caenorhabditis elegans

text: yes

text: whole worm

text: CEL5 TAP-treated


Sample 10

text: public

characteristic: SRA accession

text: Sample 10

characteristic: Submitter Id

text: sRNA from C. elegans Dauers untreated

text: Dauers

text: Caenorhabditis elegans

text: Caenorhabditis elegans

text: no

text: whole worm

text: CEL5 untreated


Sample 11

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Sample 11

text: sRNA from C. elegans Dauers TAP-treated

text: Dauers

text: Caenorhabditis elegans

text: Caenorhabditis elegans

text: yes

text: whole worm

text: CEL6 TAP-treated


Sample 12

text: public

text: Sample 12

text: sRNA from C. elegans Dauers untreated

text: Dauers

text: Caenorhabditis elegans

characteristic: organism

text: Caenorhabditis elegans

text: no

text: whole worm

text: CEL6 untreated

characteristic: title


Sample 13

characteristic: INSDC center name

text: public

text: Sample 13

text: sRNA from P. pacificus Adults TAP-treated

characteristic: description

text: Adults

text: Pristionchus pacificus

text: Pristionchus pacificus

text: yes

text: whole worm

text: PPA1 TAP-treated


Sample 14

characteristic: INSDC first public

text: public

text: Sample 14

characteristic: collection date

text: sRNA from P. pacificus Adults untreated

text: Adults

text: Pristionchus pacificus

text: Pristionchus pacificus

text: no

text: whole worm

text: PPA1 untreated


Sample 15

text: public

text: Sample 15

text: Adults

characteristic: dev stage

text: Pristionchus pacificus

text: Pristionchus pacificus

characteristic: strain

text: yes

text: whole worm

text: PPA2 TAP-treated


Sample 16

text: public

text: Sample 16

text: sRNA from P. pacificus Adults untreated

text: Adults

text: Pristionchus pacificus

text: Pristionchus pacificus

text: no

characteristic: tap treatment

text: whole worm

characteristic: tissue type

text: PPA2 untreated


Sample 17

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: Sample 17

text: Adults

text: Pristionchus pacificus

text: Pristionchus pacificus

text: yes

text: whole worm

text: PPA3 TAP-treated


Sample 18

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Sample 18

text: sRNA from P. pacificus Adults untreated

text: Adults

text: Pristionchus pacificus

text: Pristionchus pacificus

text: no

text: whole worm

text: PPA3 untreated


Sample 19

text: public

characteristic: SRA accession

text: Sample 19

characteristic: Submitter Id

text: sRNA from P. pacificus Dauers TAP-treated

text: Dauers

text: Pristionchus pacificus

text: Pristionchus pacificus

text: yes

text: whole worm

text: PPA4 TAP-treated


Sample 20

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Sample 20

text: sRNA from P. pacificus Dauers untreated

text: Dauers

text: Pristionchus pacificus

text: Pristionchus pacificus

text: no

text: whole worm

text: PPA4 untreated


Sample 21

text: public

text: Sample 21

text: Dauers

text: Pristionchus pacificus

characteristic: organism

text: Pristionchus pacificus

text: yes

text: whole worm

text: PPA5 TAP-treated

characteristic: title


Sample 22

characteristic: INSDC center name

text: public

text: Sample 22

text: sRNA from P. pacificus Dauers untreated

characteristic: description

text: Dauers

text: Pristionchus pacificus

text: Pristionchus pacificus

text: no

text: whole worm

text: PPA5 untreated


Sample 23

characteristic: INSDC first public

text: public

text: Sample 23

characteristic: collection date

text: Dauers

text: Pristionchus pacificus

text: Pristionchus pacificus

text: yes

text: whole worm

text: PPA6 TAP-treated


Sample 24

text: public

text: Sample 24

text: sRNA from P. pacificus Dauers untreated

text: Dauers

characteristic: dev stage

text: Pristionchus pacificus

text: Pristionchus pacificus

characteristic: strain

text: no

text: whole worm

text: PPA6 untreated


Sample 25

text: public

text: Sample 25

text: sRNA from S. ratti Free-living adults TAP-treated

text: Free-living adults

text: Rattus norvegicus

characteristic: lab host

text: Strongyloides ratti

text: Strongyloides ratti

text: yes

characteristic: tap treatment

text: whole worm

characteristic: tissue type

text: SRA1 TAP-treated


Sample 26

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

text: Sample 26

text: sRNA from S. ratti Free-living adults untreated

text: Free-living adults

text: Rattus norvegicus

text: Strongyloides ratti

text: Strongyloides ratti

text: no

text: whole worm

text: SRA1 untreated


Sample 27

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Sample 27

characteristic: Submitter Id

text: Free-living adults

text: Rattus norvegicus

text: Strongyloides ratti

text: Strongyloides ratti

text: yes

text: whole worm

text: SRA2 TAP-treated


Sample 28

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Sample 28

text: Free-living adults

text: Rattus norvegicus

text: Strongyloides ratti

characteristic: organism

text: Strongyloides ratti

text: no

text: whole worm

text: SRA2 untreated


Sample 29

characteristic: INSDC center name

text: public

text: Sample 29

characteristic: description

text: Free-living adults

text: Rattus norvegicus

text: Strongyloides ratti

text: Strongyloides ratti

text: yes

text: whole worm

text: SRA3 TAP-treated

characteristic: title


Sample 30

characteristic: INSDC first public

text: public

text: Sample 30

characteristic: collection date

text: Free-living adults

characteristic: dev stage

text: Rattus norvegicus

text: Strongyloides ratti

text: Strongyloides ratti

text: no

text: whole worm

text: SRA3 untreated


Sample 31

text: public

text: Sample 31

text: sRNA from S. ratti Infectives TAP-treated

text: Infectives

text: Rattus norvegicus

characteristic: lab host

text: Strongyloides ratti

text: Strongyloides ratti

characteristic: strain

text: yes

characteristic: tap treatment

text: whole worm

text: SRA4 TAP-treated


Sample 32

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: Sample 32

text: sRNA from S. ratti Infectives untreated

text: Infectives

text: Rattus norvegicus

text: Strongyloides ratti

text: Strongyloides ratti

text: no

text: whole worm

characteristic: tissue type

text: SRA4 untreated


Sample 33

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Sample 33

text: Infectives

text: Rattus norvegicus

text: Strongyloides ratti

text: Strongyloides ratti

text: yes

text: whole worm

text: SRA5 TAP-treated


Sample 34

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Sample 34

characteristic: Submitter Id

text: sRNA from S. ratti Infectives untreated

text: Infectives

text: Rattus norvegicus

text: Strongyloides ratti

text: Strongyloides ratti

text: no

text: whole worm

text: SRA5 untreated


Sample 35

characteristic: INSDC center name

text: public

text: Sample 35

characteristic: description

text: Infectives

text: Rattus norvegicus

text: Strongyloides ratti

characteristic: organism

text: Strongyloides ratti

text: yes

text: whole worm

text: SRA6 TAP-treated


Sample 36

characteristic: INSDC first public

text: public

text: Sample 36

characteristic: collection date

text: sRNA from S. ratti Infectives untreated

text: Infectives

text: Rattus norvegicus

text: Strongyloides ratti

text: Strongyloides ratti

text: no

text: whole worm

text: SRA6 untreated

characteristic: title


Sample 37

text: public

text: Sample 37

text: sRNA from S. papillosus Free-living adults TAP-treated

text: Free-living adults

characteristic: dev stage

text: Oryctolagus cuniculus

characteristic: lab host

text: Strongyloides papillosus

text: Strongyloides papillosus

text: LIN

characteristic: strain

text: yes

text: whole worm

text: SPA1 TAP-treated


Sample 38

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: Sample 38

text: sRNA from S. papillosus Free-living adults untreated

text: Free-living adults

text: Oryctolagus cuniculus

text: Strongyloides papillosus

text: Strongyloides papillosus

text: LIN

text: no

characteristic: tap treatment

text: whole worm

text: SPA1 untreated


Sample 39

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Sample 39

text: Free-living adults

text: Oryctolagus cuniculus

text: Strongyloides papillosus

text: Strongyloides papillosus

text: LIN

text: yes

text: whole worm

characteristic: tissue type

text: SPA2 TAP-treated


Sample 40

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

text: Sample 40

text: Free-living adults

text: Oryctolagus cuniculus

text: Strongyloides papillosus

text: Strongyloides papillosus

text: LIN

text: no

text: whole worm

text: SPA2 untreated


Sample 41

characteristic: INSDC center name

text: public

text: Sample 41

characteristic: Submitter Id

characteristic: description

text: Free-living adults

text: Oryctolagus cuniculus

text: Strongyloides papillosus

text: Strongyloides papillosus

text: LIN

text: yes

text: whole worm

text: SPA3 TAP-treated


Sample 42

characteristic: INSDC first public

text: public

text: Sample 42

characteristic: collection date

text: Free-living adults

text: Oryctolagus cuniculus

text: Strongyloides papillosus

characteristic: organism

text: Strongyloides papillosus

text: LIN

text: no

text: whole worm

text: SPA3 untreated


Sample 43

text: public

text: Sample 43

text: sRNA from S. papillosus Infectives TAP-treated

text: Infectives

characteristic: dev stage

text: Oryctolagus cuniculus

characteristic: lab host

text: Strongyloides papillosus

text: Strongyloides papillosus

text: LIN

text: yes

text: whole worm

text: SPA4 TAP-treated

characteristic: title


Sample 44

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: Sample 44

text: sRNA from S. papillosus Infectives untreated

text: Infectives

text: Oryctolagus cuniculus

text: Strongyloides papillosus

text: Strongyloides papillosus

text: LIN

characteristic: strain

text: no

text: whole worm

text: SPA4 untreated


Sample 45

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Sample 45

text: Infectives

text: Oryctolagus cuniculus

text: Strongyloides papillosus

text: Strongyloides papillosus

text: LIN

text: yes

characteristic: tap treatment

text: whole worm

text: SPA5 TAP-treated


Sample 46

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Sample 46

text: Infectives

text: Oryctolagus cuniculus

text: Strongyloides papillosus

text: Strongyloides papillosus

text: LIN

text: no

text: whole worm

characteristic: tissue type

text: SPA5 untreated


Sample 47

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: Sample 47

characteristic: Submitter Id

text: Infectives

text: Oryctolagus cuniculus

text: Strongyloides papillosus

text: Strongyloides papillosus

text: LIN

text: yes

text: whole worm

text: SPA6 TAP-treated


Sample 48

characteristic: INSDC first public

text: public

text: Sample 48

characteristic: collection date

characteristic: description

text: Infectives

text: Oryctolagus cuniculus

text: Strongyloides papillosus

text: Strongyloides papillosus

text: LIN

text: no

text: whole worm

text: SPA6 untreated


Sample 49

text: public

text: Sample 49

text: sRNA from P. trichosuri Free-living adults TAP-treated

text: Free-living adults

characteristic: dev stage

text: Parastrongyloides trichosuri

characteristic: organism

text: Parastrongyloides trichosuri

text: yes

text: whole worm

text: PTR1 TAP-treated


Sample 50

characteristic: ENA-CHECKLIST

text: public

text: Sample 50

text: sRNA from P. trichosuri Free-living adults untreated

text: Free-living adults

text: Parastrongyloides trichosuri

text: Parastrongyloides trichosuri

text: no

text: whole worm

text: PTR1 untreated

characteristic: title


Sample 51

characteristic: ENA-FIRST-PUBLIC

text: public

text: Sample 51

text: Free-living adults

text: Parastrongyloides trichosuri

text: Parastrongyloides trichosuri

text: yes

text: whole worm

text: PTR2 TAP-treated


Sample 52

characteristic: INSDC last update

text: public

text: Sample 52

text: Free-living adults

text: Parastrongyloides trichosuri

text: Parastrongyloides trichosuri

text: no

text: whole worm

text: PTR2 untreated


Sample 53

text: public

characteristic: INSDC status

text: Sample 53

text: Free-living adults

text: Parastrongyloides trichosuri

text: Parastrongyloides trichosuri

text: yes

text: whole worm

text: PTR3 TAP-treated


Sample 54

text: public

text: Sample 54

text: Free-living adults

text: Parastrongyloides trichosuri

text: Parastrongyloides trichosuri

text: no

characteristic: tap treatment

text: whole worm

text: PTR3 untreated


Sample 55

characteristic: ENA-LAST-UPDATE

text: public

text: Sample 55

text: sRNA from P. trichosuri Infectives TAP-treated

text: Infectives

text: Parastrongyloides trichosuri

text: Parastrongyloides trichosuri

text: yes

text: whole worm

text: PTR4 TAP-treated


Sample 56

characteristic: External Id

text: public

text: Sample 56

text: sRNA from P. trichosuri Infectives untreated

text: Infectives

text: Parastrongyloides trichosuri

text: Parastrongyloides trichosuri

text: no

text: whole worm

text: PTR4 untreated


Sample 57

text: public

text: Sample 57

text: Infectives

text: Parastrongyloides trichosuri

text: Parastrongyloides trichosuri

text: yes

text: whole worm

characteristic: tissue type

text: PTR5 TAP-treated


Sample 58

characteristic: INSDC center name

text: public

text: Sample 58

text: Infectives

text: Parastrongyloides trichosuri

text: Parastrongyloides trichosuri

text: no

text: whole worm

text: PTR5 untreated


Sample 59

text: public

characteristic: SRA accession

text: Sample 59

text: Infectives

text: Parastrongyloides trichosuri

text: Parastrongyloides trichosuri

text: yes

text: whole worm

text: PTR6 TAP-treated


Sample 60

text: public

text: Sample 60

characteristic: Submitter Id

text: Infectives

text: Parastrongyloides trichosuri

text: Parastrongyloides trichosuri

text: no

text: whole worm

text: PTR6 untreated


Sample 61

characteristic: INSDC first public

text: public

text: Sample 61

text: Norway rat

characteristic: common name

text: sRNA from whole blood of R. norvegicus mock-infected with PBS, TAP-treated

text: Rattus norvegicus

text: Rattus norvegicus

text: yes

text: whole blood

text: RNO1 TAP-treated


Sample 62

text: public

text: Sample 62

characteristic: collection date

text: Norway rat

text: sRNA from whole blood of R. norvegicus mock-infected with PBS, untreated

characteristic: description

text: Rattus norvegicus

text: Rattus norvegicus

text: no

text: whole blood

text: RNO1 untreated


Sample 63

text: public

text: Sample 63

text: Norway rat

text: Rattus norvegicus

characteristic: organism

text: Rattus norvegicus

text: yes

text: whole blood

text: RNO2 TAP-treated


Sample 64

characteristic: ENA-CHECKLIST

text: public

text: Sample 64

text: Norway rat

text: Rattus norvegicus

text: Rattus norvegicus

text: no

text: whole blood

text: RNO2 untreated


Sample 65

text: public

text: Sample 65

text: Norway rat

text: sRNA from whole blood of R. norvegicus infected with S. ratti, TAP-treated

text: Rattus norvegicus

text: Rattus norvegicus

text: yes

text: whole blood

text: RNO3 TAP-treated

characteristic: title


Sample 66

characteristic: ENA-FIRST-PUBLIC

text: MAX PLANCK INSTITUTE FOR DEVELOPMENTAL BIOLOGY

text: public

text: Sample 66

text: Norway rat

text: sRNA from whole blood of R. norvegicus infected with S. ratti, untreated

text: Rattus norvegicus

text: Rattus norvegicus

text: no

text: whole blood

text: RNO3 untreated


Sample 67

characteristic: INSDC last update

text: public

text: Sample 67

text: Norway rat

text: Rattus norvegicus

text: Rattus norvegicus

text: yes

text: whole blood

text: RNO4 TAP-treated


Sample 68

text: public

characteristic: INSDC status

text: Sample 68

text: Norway rat

text: Rattus norvegicus

text: Rattus norvegicus

text: no

text: whole blood

text: RNO4 untreated


Sample 69

text: public

text: Sample 69

text: Norway rat

text: Rattus norvegicus

text: Rattus norvegicus

text: yes

characteristic: tap treatment

text: whole blood


Sample 70

characteristic: ENA-LAST-UPDATE

text: public

text: Sample 70

text: Norway rat

text: Rattus norvegicus

text: Rattus norvegicus

text: no

text: whole blood


characteristic: External Id

text: URMITE

text: public

text: Bartonella sp. 008

text: Bartonella sp. 008

characteristic: strain

text: Bartonella mastomydis genome


text: MPI-EVA

characteristic: INSDC center name

text: public

text: Yes

characteristic: environmental sample

text: Russia

characteristic: geographic location (country and/or sea)

text: Homo sapiens neanderthalensis

text: Homo sapiens neanderthalensis

text: female

characteristic: sex

text: bone

characteristic: tissue type

text: Mezmaiskaya1 sample


text: Streptococcus mutans

characteristic: ArrayExpress-SPECIES

text: SC

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Streptococcus mutans

characteristic: common name

text: Streptococcus mutans

text: Streptococcus mutans

characteristic: subject id


text: Streptococcus pyogenes

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC last update

text: public

text: Streptococcus pyogenes

text: Streptococcus pyogenes

characteristic: organism

text: Streptococcus pyogenes

characteristic: title


text: Streptococcus canis

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

characteristic: INSDC status

text: Streptococcus canis

text: Streptococcus canis

text: Streptococcus canis


text: Streptococcus intermedius

text: SC

characteristic: INSDC center name

text: public

text: Streptococcus intermedius

text: Streptococcus intermedius

text: Streptococcus intermedius


text: Streptococcus porcinus

text: SC

text: public

text: Streptococcus porcinus

text: Streptococcus porcinus

text: Streptococcus porcinus


text: Streptococcus vestibularis

text: SC

text: public

text: Streptococcus vestibularis

text: Streptococcus vestibularis

text: Streptococcus vestibularis


text: Streptococcus cristatus

text: SC

text: public

text: Streptococcus cristatus

text: Streptococcus cristatus

text: Streptococcus cristatus


text: Streptococcus mitis biovar 2

text: SC

text: public

text: Streptococcus mitis biovar 2

text: Streptococcus mitis bv. 2

text: Streptococcus mitis bv. 2


text: Streptococcus mitis

text: SC

text: public

text: Streptococcus mitis

text: Streptococcus mitis

text: Streptococcus mitis


text: Streptococcus peroris

text: SC

text: public

text: Streptococcus peroris

text: Streptococcus peroris

text: Streptococcus peroris


text: Streptococcus entericus

text: SC

text: public

text: Streptococcus entericus

text: Streptococcus entericus

text: Streptococcus entericus


Pantoea agglomerans DSM3493T

text: JUSTUS LIEBIG UNIVERSITY

text: public

text: Pantoea agglomerans DSM3493T

tag: Namespace:JUSTUS LIEBIG UNIVERSITY

text: Pantoea agglomerans

text: Pantoea agglomerans

text: Pantoea agglomerans DSM3493T Type strain whole genome sequence


Enterobacter cancerogenus ATCC33241

text: JUSTUS LIEBIG UNIVERSITY

text: public

text: Enterobacter cancerogenus ATCC33241

text: Enterobacter cancerogenus ATCC33241 Type strain whole genome sequence

characteristic: description

text: Enterobacter cancerogenus

text: Enterobacter cancerogenus


Enterobacter kobei DSM27110T

text: JUSTUS LIEBIG UNIVERSITY

text: public

text: Enterobacter kobei DSM27110T

text: Enterobacter kobei

text: Enterobacter kobei

text: Enterobacter kobei DSM27110T Type strain whole genome sequence


Enterobacter ludwigii DSM16688T

text: JUSTUS LIEBIG UNIVERSITY

text: public

text: Enterobacter ludwigii DSM16688T

text: Enterobacter ludwigii

text: Enterobacter ludwigii

text: Enterobacter ludwigii DSM16688T Type strain whole genome sequence


Kosakonia oryzendophytica LMG 26432T

text: JUSTUS LIEBIG UNIVERSITY

text: public

text: Kosakonia oryzendophytica LMG 26432T

text: Kosakonia oryzendophytica

text: Kosakonia oryzendophytica

text: Kosakonia oryzendophytica LMG 26432T Type strain whole genome sequence


Enterobacter soli LMG 25861T

text: JUSTUS LIEBIG UNIVERSITY

text: public

text: Enterobacter soli LMG 25861T

text: Enterobacter soli LMG 25861T Type strain whole genome sequence

text: Enterobacter soli

text: Enterobacter soli


Enterobacter xiangfangensis LMG 27195T

text: JUSTUS LIEBIG UNIVERSITY

text: public

text: Enterobacter xiangfangensis LMG 27195T

text: Enterobacter xiangfangensis

text: Enterobacter xiangfangensis

text: Enterobacter xiangfangensis LMG 27195T Type strain whole genome sequence


text: Homo sapiens

text: Human Cell line (HEK293)

text: SC

text: public

text: human

text: Homo sapiens

text: Homo sapiens


text: University Hospital Galway

text: public

tag: Namespace:University Hospital Galway

characteristic: collection date

text: Ireland

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: host scientific name

characteristic: isolate

text: Human

characteristic: isolation source

text: Salmonella enterica subsp. enterica serovar Agona

text: Agona

characteristic: serovar

text: Subsp. I

characteristic: sub species


characteristic: ENA-CHECKLIST

text: University Hospital Galway

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Ireland

text: Homo sapiens

text: Human

text: Salmonella enterica subsp. enterica serovar Hvittingfoss

text: Hvittingfoss

text: Subsp. I


characteristic: ENA-FIRST-PUBLIC

text: University Hospital Galway

characteristic: INSDC last update

text: public

text: Ireland

text: Homo sapiens

text: Human

text: Salmonella enterica subsp. enterica serovar Saintpaul

characteristic: organism

text: Saintpaul

text: Subsp. I

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University Hospital Galway

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Ireland

text: Homo sapiens

text: Human

text: Salmonella enterica subsp. enterica serovar Chester

text: Chester

text: Subsp. I


text: University Hospital Galway

text: public

characteristic: collection date

text: Ireland

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: host scientific name

text: Human

text: Salmonella enterica subsp. enterica serovar Typhimurium

text: Typhimurium

text: Subsp. I


text: University Hospital Galway

text: public

text: Ireland

text: Homo sapiens

characteristic: isolate

text: Human

characteristic: isolation source

text: Salmonella enterica subsp. enterica serovar Weltevreden

text: Weltevreden

characteristic: serovar

text: Subsp. I


characteristic: ENA-CHECKLIST

text: University Hospital Galway

characteristic: INSDC first public

text: public

text: Ireland

text: Homo sapiens

text: Human

text: Salmonella enterica subsp. enterica serovar Muenster

text: Muenster

text: Subsp. I

characteristic: sub species


characteristic: ENA-FIRST-PUBLIC

text: University Hospital Galway

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Ireland

text: Homo sapiens

text: Human

text: Salmonella enterica subsp. enterica serovar Altona

text: Altona

text: Subsp. I


text: University Hospital Galway

characteristic: INSDC last update

text: public

text: Ireland

text: Homo sapiens

text: Human

text: Salmonella enterica subsp. enterica serovar Paratyphi A

characteristic: organism

text: Paratyphi A

text: Subsp. I

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University Hospital Galway

characteristic: INSDC center name

text: public

text: Ireland

text: Homo sapiens

text: Human

text: Salmonella enterica subsp. enterica serovar Brandenburg

text: Brandenburg

text: Subsp. I


text: CD4+ T cells

text: Mus musculus

characteristic: ArrayExpress-SPECIES

text: SC

text: public

characteristic: INSDC status

text: house mouse

characteristic: common name

text: Mus musculus

text: Mus musculus

characteristic: subject id

text: Mus musculus


text: liver

text: Mus musculus

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: Mus musculus


text: MLN

text: Mus musculus

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: Mus musculus


text: Salmonella enterica subsp. enterica serovar Typhi

text: SC

text: public


text: Neisseria gonorrhoeae

text: SC

text: public

text: Neisseria gonorrhoeae

text: Neisseria gonorrhoeae

text: Neisseria gonorrhoeae


text: Plasmodium falciparum

text: SC

text: public

text: malaria parasite P. falciparum

text: Plasmodium falciparum

text: Plasmodium falciparum


text: QLD Health

text: public

tag: Namespace:QLD Health

text: metagenomes

text: metagenomes

text: Bacterial sequences from clinical sample


ALE Day 0

text: KAIST

text: public

text: ALE Day 0

text: Whole Genome resequencing of E. coli population during ALE

characteristic: description

text: Escherichia coli str. K-12 substr. MG1655

text: Whole Genome Resequencing, ALE Day 0


ALE Day 5

characteristic: ENA-CHECKLIST

text: KAIST

text: public

text: ALE Day 5

text: Whole Genome Resequencing, ALE Day 5


ALE Day 10

text: KAIST

characteristic: INSDC first public

text: public

text: ALE Day 10

text: Whole Genome Resequencing, ALE Day 10


ALE Day 15

text: KAIST

text: public

text: ALE Day 15

text: Whole Genome Resequencing, ALE Day 15


ALE Day 20

text: KAIST

text: public

text: ALE Day 20

text: Whole Genome Resequencing, ALE Day 20


ALE Day 25

text: KAIST

text: public

text: ALE Day 25

text: Whole Genome Resequencing, ALE Day 25


ALE Day 27

text: KAIST

text: public

text: ALE Day 27

text: Whole Genome Resequencing, ALE Day 27


ALE Day 28

text: KAIST

text: public

text: ALE Day 28

text: Whole Genome Resequencing, ALE Day 28


ALE Day 29

text: KAIST

text: public

text: ALE Day 29

text: Whole Genome Resequencing, ALE Day 29


ALE Day 30

text: KAIST

text: public

text: ALE Day 30

text: Whole Genome Resequencing, ALE Day 30


ALE Day 35

text: KAIST

text: public

text: ALE Day 35

text: Whole Genome Resequencing, ALE Day 35


ALE Day 40

text: KAIST

text: public

text: ALE Day 40

text: Whole Genome Resequencing, ALE Day 40


ALE Day 45

text: KAIST

text: public

text: ALE Day 45

text: Whole Genome Resequencing, ALE Day 45


ALE Day 50

text: KAIST

text: public

text: ALE Day 50

text: Whole Genome Resequencing, ALE Day 50


ALE Day 55

text: KAIST

text: public

text: ALE Day 55

text: Whole Genome Resequencing, ALE Day 55


ALE Day 60

text: KAIST

text: public

text: ALE Day 60

text: Whole Genome Resequencing, ALE Day 60


text: CSIRO ANIMAL FOOD & HEALTH SCIENCES

text: public

tag: Namespace:CSIRO ANIMAL FOOD & HEALTH SCIENCES

characteristic: collection date

text: Rumen sample from cattle (Brahman) fed with hay:concentrate (60:40)

text: anatomical entity environment

characteristic: environment (biome)

text: microbial feature

characteristic: environment (feature)

text: microbial mat material

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: Australia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: metagenome

text: Energy pathway_2

characteristic: project name

text: metagenome

text: Illumina MiSeq

characteristic: sequencing method


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSIRO ANIMAL FOOD & HEALTH SCIENCES

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Rumen sample from cattle (Brahman) fed with hay:concentrate (60:40) and treated with chloroform at day 21

text: anatomical entity environment

text: microbial feature

text: microbial mat material

text: host-associated

text: Australia

text: host-associated

text: metagenome

text: metagenome

characteristic: organism

text: Energy pathway_2

text: metagenome

text: Illumina MiSeq

characteristic: title


characteristic: ENA-CHECKLIST

text: CSIRO ANIMAL FOOD & HEALTH SCIENCES

characteristic: INSDC first public

text: public

characteristic: collection date

text: Rumen sample from cattle (Brahman) fed with hay:concentrate (60:40) and treated with chloroform and phloroglucinol at day 37

characteristic: description

text: anatomical entity environment

characteristic: environment (biome)

text: microbial feature

characteristic: environment (feature)

text: microbial mat material

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: Australia

characteristic: geographic location (country and/or sea)

text: host-associated

text: metagenome

text: metagenome

text: Energy pathway_2

text: metagenome

text: Illumina MiSeq

text: Animal_3354_Phloroglucinol + Chlorform_37_Day1


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSIRO ANIMAL FOOD & HEALTH SCIENCES

text: public

text: anatomical entity environment

text: microbial feature

text: microbial mat material

text: host-associated

text: Australia

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: metagenome

text: Energy pathway_2

characteristic: project name

text: metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: Animal_3354_Phloroglucinol + Chlorform_37_Day2


characteristic: ENA-CHECKLIST

text: CSIRO ANIMAL FOOD & HEALTH SCIENCES

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Rumen sample from cattle (Brahman) fed with hay:concentrate (60:40) and treated with chloroform at day 37

text: anatomical entity environment

text: microbial feature

text: microbial mat material

text: host-associated

text: Australia

text: host-associated

text: metagenome

text: metagenome

characteristic: organism

text: Energy pathway_2

text: metagenome

text: Illumina MiSeq

characteristic: title