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text: Characterization of gut microbes in mice on soybean oil diets. Mice were fed either a 16% by calorie soybean oil diet (LF) or 44% by calorie soybean oil diet (HF) at weaning. After 10 weeks, the mice were gavaged with PBS/saline, linoleic acid (18:2), or alpha-linolenic acid (18:3). 1.5 hours later, the mice were sacrificed and small intestine contents were removed for sampling. In one set of mice (set 2), the small intestine contents were split in half and one aliquot was treated with PMA. Pour order refers to which aliquot received PMA.

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text: mouse

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text: LF

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text: male

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text: metagenome

text: CAGCTCATCAGC

text: Mus musculus

characteristic: organism

text: Linoleic acid resistant Lactobacilli

characteristic: project name

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text: Illumina MiSeq 2x250 bp

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text: 16S rRNA V4 region

characteristic: title

text: Jax


characteristic: ENA-CHECKLIST

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text: CORNELL

characteristic: INSDC center name

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characteristic: collection date

text: house mouse

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text: gastrointestinal tract

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text: material entity in digestive tract

text: USA

text: 42.4534° N

text: 76.4735° W

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text: host-associated

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text: metagenome

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text: AGATTGACCAAC

characteristic: multiplex identifiers

text: Mus musculus

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text: Linoleic acid resistant Lactobacilli

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text: house mouse

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characteristic: dna extraction day

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text: material entity in digestive tract

characteristic: environment (material)

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text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Poop

characteristic: host body site

text: mouse

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text: LF

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text: Mus musculus

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text: Mus musculus

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text: feces

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text: material entity in digestive tract

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text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Poop

characteristic: host body site

text: mouse

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text: HF

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text: male

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text: Mus musculus

characteristic: organism

text: Linoleic acid resistant Lactobacilli

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text: 16S rRNA V4 region

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text: Jax


characteristic: ENA-CHECKLIST

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text: CORNELL

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characteristic: multiplex identifiers

text: Mus musculus

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text: Linoleic acid resistant Lactobacilli

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text: Jax

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text: CORNELL

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text: material entity in digestive tract

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text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Poop

characteristic: host body site

text: mouse

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text: HF

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text: CORNELL

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text: Mus musculus

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text: material entity in digestive tract

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text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Poop

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text: Mus musculus

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text: Mus musculus

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text: feces

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text: USA

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text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

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text: Poop

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text: USA

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text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Poop

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text: USA

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text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

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text: Poop

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text: Mus musculus

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text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Poop

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text: Mus musculus

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characteristic: environment (material)

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text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Poop

characteristic: host body site

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characteristic: ENA-CHECKLIST

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characteristic: host subject id

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text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

characteristic: litter

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text: AACTAGTTCAGG

characteristic: multiplex identifiers

text: Mus musculus

characteristic: pcr concentration (ng/ul)

text: Linoleic acid resistant Lactobacilli

text: Mus musculus

characteristic: sequence counts

text: Illumina MiSeq 2x250 bp

characteristic: starting weight (grams)

characteristic: study

text: 16S rRNA V4 region

characteristic: target gene

text: Jax

characteristic: vendor


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

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text: CORNELL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

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characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

characteristic: dna extraction day

characteristic: dob

text: gastrointestinal tract

characteristic: environment (biome)

text: feces

characteristic: environment (feature)

text: material entity in digestive tract

characteristic: environment (material)

characteristic: fat pad weight (grams)

text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Poop

characteristic: host body site

text: mouse

characteristic: host common name

text: LF

characteristic: host diet

text: male

text: host-associated

text: metagenome

text: CATCCCTCTACT

text: Mus musculus

characteristic: organism

text: Linoleic acid resistant Lactobacilli

characteristic: project name

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text: Illumina MiSeq 2x250 bp

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text: 16S rRNA V4 region

characteristic: title

text: Jax


characteristic: ENA-CHECKLIST

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text: CORNELL

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characteristic: collection date

text: house mouse

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text: gastrointestinal tract

text: feces

text: material entity in digestive tract

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text: 76.4735° W

text: Poop

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characteristic: host sex

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text: host-associated

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text: metagenome

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text: AGGCTTACGTGT

characteristic: multiplex identifiers

text: Mus musculus

characteristic: pcr concentration (ng/ul)

text: Linoleic acid resistant Lactobacilli

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text: Illumina MiSeq 2x250 bp

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text: Jax

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characteristic: collection date

text: house mouse

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characteristic: dna extraction day

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text: gastrointestinal tract

characteristic: environment (biome)

text: feces

characteristic: environment (feature)

text: material entity in digestive tract

characteristic: environment (material)

characteristic: fat pad weight (grams)

text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Poop

characteristic: host body site

text: mouse

characteristic: host common name

text: HF

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text: male

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text: metagenome

text: ATCCTTTGGTTC

text: Mus musculus

characteristic: organism

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characteristic: project name

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text: Illumina MiSeq 2x250 bp

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text: 16S rRNA V4 region

characteristic: title

text: Jax


characteristic: ENA-CHECKLIST

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text: CORNELL

characteristic: INSDC center name

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text: public

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characteristic: Submitter Id

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characteristic: collection date

text: house mouse

characteristic: common name

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characteristic: description

text: gastrointestinal tract

text: feces

text: material entity in digestive tract

text: USA

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text: 76.4735° W

text: Poop

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characteristic: host sex

characteristic: host subject id

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text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

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text: CTCACAACCGTG

characteristic: multiplex identifiers

text: Mus musculus

characteristic: pcr concentration (ng/ul)

text: Linoleic acid resistant Lactobacilli

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characteristic: sequence counts

text: Illumina MiSeq 2x250 bp

characteristic: starting weight (grams)

characteristic: study

text: 16S rRNA V4 region

characteristic: target gene

text: Jax

characteristic: vendor


characteristic: ENA-CHECKLIST

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text: CORNELL

characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

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characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

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characteristic: dna extraction day

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text: gastrointestinal tract

characteristic: environment (biome)

text: feces

characteristic: environment (feature)

text: material entity in digestive tract

characteristic: environment (material)

characteristic: fat pad weight (grams)

text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Poop

characteristic: host body site

text: mouse

characteristic: host common name

text: HF

characteristic: host diet

text: male

text: host-associated

text: metagenome

text: TGTGAATTCGGA

text: Mus musculus

characteristic: organism

text: Linoleic acid resistant Lactobacilli

characteristic: project name

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text: Illumina MiSeq 2x250 bp

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text: 16S rRNA V4 region

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text: Jax


characteristic: ENA-CHECKLIST

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text: CORNELL

characteristic: INSDC center name

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text: public

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characteristic: Submitter Id

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characteristic: collection date

text: house mouse

characteristic: common name

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text: gastrointestinal tract

text: feces

text: material entity in digestive tract

text: USA

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text: 76.4735° W

text: Poop

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characteristic: host sex

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text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

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text: ATGGCTGTCAGT

characteristic: multiplex identifiers

text: Mus musculus

characteristic: pcr concentration (ng/ul)

text: Linoleic acid resistant Lactobacilli

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text: Illumina MiSeq 2x250 bp

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characteristic: study

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text: Jax

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characteristic: ENA-CHECKLIST

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text: CORNELL

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characteristic: collection date

text: house mouse

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text: feces

characteristic: environment (feature)

text: material entity in digestive tract

characteristic: environment (material)

characteristic: fat pad weight (grams)

text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Poop

characteristic: host body site

text: mouse

characteristic: host common name

text: HF

characteristic: host diet

text: male

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text: Jax


characteristic: ENA-CHECKLIST

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text: CORNELL

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characteristic: collection date

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text: 76.4735° W

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text: host-associated

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text: metagenome

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text: GCTCGAAGATTC

characteristic: multiplex identifiers

text: Mus musculus

characteristic: pcr concentration (ng/ul)

text: Linoleic acid resistant Lactobacilli

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text: Illumina MiSeq 2x250 bp

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text: Jax

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text: CORNELL

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text: feces

characteristic: environment (feature)

text: material entity in digestive tract

characteristic: environment (material)

characteristic: fat pad weight (grams)

text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Poop

characteristic: host body site

text: mouse

characteristic: host common name

text: HF

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text: male

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characteristic: ENA-CHECKLIST

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text: CORNELL

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text: public

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characteristic: collection date

text: house mouse

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text: 76.4735° W

text: Poop

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text: host-associated

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text: metagenome

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text: GTGGAGTCTCAT

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text: Mus musculus

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text: Linoleic acid resistant Lactobacilli

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text: Jax

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text: material entity in digestive tract

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text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Poop

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text: male

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characteristic: ENA-CHECKLIST

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text: CORNELL

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text: TTGCGTTAGCAG

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text: Mus musculus

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text: Linoleic acid resistant Lactobacilli

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text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Poop

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characteristic: ENA-CHECKLIST

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text: CORNELL

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text: house mouse

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text: Mus musculus

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text: Jax

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text: feces

characteristic: environment (feature)

text: material entity in digestive tract

characteristic: environment (material)

characteristic: fat pad weight (grams)

text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Poop

characteristic: host body site

text: mouse

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characteristic: host diet

text: male

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text: Mus musculus

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characteristic: project name

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characteristic: ENA-CHECKLIST

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text: CORNELL

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characteristic: collection date

text: house mouse

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text: Mus musculus

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text: Jax

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characteristic: environment (feature)

text: material entity in digestive tract

characteristic: environment (material)

characteristic: fat pad weight (grams)

text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Poop

characteristic: host body site

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characteristic: host diet

text: male

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characteristic: organism

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characteristic: project name

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characteristic: title

text: Jax


characteristic: ENA-CHECKLIST

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text: CORNELL

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characteristic: Submitter Id

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characteristic: cage

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: days on diet

characteristic: description

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text: feces

text: material entity in digestive tract

text: USA

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text: 76.4735° W

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characteristic: multiplex identifiers

text: Mus musculus

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text: Linoleic acid resistant Lactobacilli

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characteristic: sequence counts

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characteristic: target gene

text: Jax

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text: CORNELL

characteristic: INSDC center name

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text: material entity in digestive tract

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characteristic: fat pad weight (grams)

text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Poop

characteristic: host body site

text: mouse

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text: HF

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text: male

text: host-associated

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text: ACTTCCAACTTC

text: Mus musculus

characteristic: organism

text: Linoleic acid resistant Lactobacilli

characteristic: project name

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text: Illumina MiSeq 2x250 bp

characteristic: sequencing method

text: 16S rRNA V4 region

characteristic: title

text: Jax


characteristic: ENA-CHECKLIST

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text: CORNELL

characteristic: INSDC center name

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text: 76.4735° W

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text: metagenome

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text: CGAGCAATCCTA

characteristic: multiplex identifiers

text: Mus musculus

characteristic: pcr concentration (ng/ul)

text: Linoleic acid resistant Lactobacilli

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characteristic: dna extraction day

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text: material entity in digestive tract

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characteristic: fat pad weight (grams)

text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Poop

characteristic: host body site

text: mouse

characteristic: host common name

text: HF

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text: male

text: host-associated

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text: AATTGTGTCGGA

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text: Mus musculus

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text: Linoleic acid resistant Lactobacilli

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characteristic: environment (feature)

text: material entity in digestive tract

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characteristic: fat pad weight (grams)

text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Poop

characteristic: host body site

text: mouse

characteristic: host common name

text: LF

characteristic: host diet

text: male

text: host-associated

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text: Mus musculus

characteristic: organism

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characteristic: ENA-CHECKLIST

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text: CORNELL

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characteristic: Submitter Id

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text: 76.4735° W

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text: metagenome

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text: material entity in digestive tract

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text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Poop

characteristic: host body site

text: mouse

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characteristic: host diet

text: male

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text: Jax


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text: 76.4735° W

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text: metagenome

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text: GAATACCAAGTC

characteristic: multiplex identifiers

text: Mus musculus

characteristic: pcr concentration (ng/ul)

text: Linoleic acid resistant Lactobacilli

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characteristic: sequence counts

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characteristic: starting weight (grams)

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characteristic: target gene

text: Jax

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characteristic: environment (material)

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text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Poop

characteristic: host body site

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text: male

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text: ACTCACAGGAAT

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characteristic: organism

text: Linoleic acid resistant Lactobacilli

characteristic: project name

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characteristic: sequencing method

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characteristic: title

text: Jax


characteristic: ENA-CHECKLIST

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text: CORNELL

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text: USA

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text: 76.4735° W

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text: GTATCTGCGCGT

characteristic: multiplex identifiers

text: Mus musculus

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text: Linoleic acid resistant Lactobacilli

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text: Jax

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text: feces

characteristic: environment (feature)

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characteristic: environment (material)

characteristic: fat pad weight (grams)

text: USA

characteristic: geographic location (country and/or sea)

text: 42.4534° N

characteristic: geographic location (latitude)

text: 76.4735° W

characteristic: geographic location (longitude)

text: Poop

characteristic: host body site

text: mouse

characteristic: host common name

text: HF

characteristic: host diet

text: male

text: host-associated

text: metagenome

text: GAGCCATCTGTA

text: Mus musculus

characteristic: organism

text: Linoleic acid resistant Lactobacilli

characteristic: project name

text: Mus musculus

text: Illumina MiSeq 2x250 bp

characteristic: sequencing method

text: 16S rRNA V4 region

characteristic: title

text: Jax