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text: public

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text: FALSE

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characteristic: ENA-CHECKLIST

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text: organic material

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text: Culex pipiens/restuans

text: mosquito

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text: TRUE

text: mosquito tissue

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text: Culex pipiens/restuans


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text: public

characteristic: INSDC status

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text: mosquito

text: mosquito metagenome

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text: FALSE

text: TRUE

text: mosquito tissue

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text: Culex pipiens/restuans


text: UCSDMI

text: public

text: UBERON:multicellular organism

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text: Ochlerotatus canadensis Q3OcanW35TOR2011

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text: temperate biome

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characteristic: host scientific name

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characteristic: longitude

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text: Ochlerotatus canadensis


text: UCSDMI

text: public

characteristic: Submitter Id

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text: organic material

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text: Aedes vexans complex

text: mosquito

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characteristic: organism

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

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text: Av

text: Aedes vexans complex


characteristic: ENA-CHECKLIST

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text: UCSDMI

text: public

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text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

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text: Aedes vexans complex

text: mosquito

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text: TRUE

characteristic: public

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text: Av

text: Aedes vexans complex


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text: Aedes vexans complex

text: mosquito

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text: TRUE

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text: Aedes vexans complex

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text: UCSDMI

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text: temperate biome

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text: organic material

text: host-associated

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text: Aedes vexans complex

text: mosquito

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text: Aedes vexans complex

characteristic: title


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characteristic: INSDC last update

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text: organic material

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text: Aedes vexans complex

text: mosquito

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text: FALSE

text: TRUE

text: mosquito tissue

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text: Aedes vexans complex


text: UCSDMI

text: public

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characteristic: description

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text: insecta-associated habitat

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text: host-associated

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text: TOR

text: Aedes vexans complex

characteristic: host scientific name

text: mosquito

characteristic: latitude

text: mosquito metagenome

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text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: Av

text: Aedes vexans complex


text: UCSDMI

text: public

characteristic: Submitter Id

text: UBERON:multicellular organism

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text: Culex pipiens/restuans R1CxW23TOR2012

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characteristic: elevation

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text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: TOR

text: Culex pipiens/restuans

text: mosquito

characteristic: longitude

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

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text: Culex pipiens/restuans


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

text: UBERON:multicellular organism

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text: Culex pipiens/restuans R1CxW25TOR2011

text: TRUE

text: temperate biome

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text: organic material

text: host-associated

text: Canada

text: TOR

text: Culex pipiens/restuans

text: mosquito

text: mosquito metagenome

characteristic: organism

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: Cx

text: Culex pipiens/restuans


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: UBERON:multicellular organism

text: UBERON:tissue

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text: Culex pipiens/restuans R1CxW25TOR2012

text: TRUE

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: TOR

text: Culex pipiens/restuans

text: mosquito

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

characteristic: public

text: mosquito tissue

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text: Cx

text: Culex pipiens/restuans


text: UCSDMI

characteristic: INSDC center name

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text: UBERON:multicellular organism

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text: temperate biome

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text: organic material

text: host-associated

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text: Culex pipiens/restuans

text: mosquito

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text: FALSE

text: TRUE

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text: Culex pipiens/restuans

characteristic: wnv


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text: organic material

text: host-associated

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text: mosquito

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text: TRUE

text: mosquito tissue

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text: Culex pipiens/restuans

characteristic: title

text: unknown


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text: public

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text: host-associated

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text: Culex pipiens/restuans

characteristic: host scientific name

text: mosquito

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text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: Cx

text: Culex pipiens/restuans

text: unknown


text: UCSDMI

text: public

characteristic: Submitter Id

text: UBERON:multicellular organism

text: UBERON:tissue

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text: Culex pipiens/restuans R1CxW28TOR2011

text: TRUE

characteristic: elevation

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text: organic material

text: host-associated

text: Canada

text: TOR

text: Culex pipiens/restuans

text: mosquito

characteristic: latitude

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

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text: Culex pipiens/restuans


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

text: UBERON:multicellular organism

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text: Culex pipiens/restuans R1CxW28TOR2012

text: TRUE

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

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text: Culex pipiens/restuans

text: mosquito

characteristic: longitude

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

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text: Culex pipiens/restuans


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: UBERON:multicellular organism

text: UBERON:tissue

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text: Culex pipiens/restuans R1CxW29TOR2011

text: TRUE

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: TOR

text: Culex pipiens/restuans

text: mosquito

text: mosquito metagenome

characteristic: organism

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text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: Cx

text: Culex pipiens/restuans


text: UCSDMI

characteristic: INSDC center name

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text: temperate biome

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text: organic material

text: host-associated

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text: mosquito

text: mosquito metagenome

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text: TRUE

characteristic: public

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text: Culex pipiens/restuans


text: UCSDMI

characteristic: INSDC last update

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text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: TOR

text: Culex pipiens/restuans

text: mosquito

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: Cx

text: Culex pipiens/restuans

characteristic: wnv


text: UCSDMI

text: public

characteristic: SRA accession

text: UBERON:multicellular organism

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text: temperate biome

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text: organic material

text: host-associated

text: Canada

text: TOR

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text: mosquito

text: mosquito metagenome

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text: FALSE

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text: Culex pipiens/restuans

characteristic: title


text: UCSDMI

text: public

characteristic: Submitter Id

text: UBERON:multicellular organism

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characteristic: elevation

text: temperate biome

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text: organic material

text: host-associated

text: Canada

text: TOR

text: Culex pipiens/restuans

characteristic: host scientific name

text: mosquito

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: Cx

text: Culex pipiens/restuans


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

text: UBERON:multicellular organism

text: UBERON:tissue

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text: Culex pipiens/restuans R1CxW34TOR2011

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text: organic material

text: host-associated

text: Canada

text: TOR

text: Culex pipiens/restuans

text: mosquito

characteristic: latitude

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: Cx

text: Culex pipiens/restuans


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: UBERON:multicellular organism

text: UBERON:tissue

text: UBERON:gut

text: Culex pipiens/restuans R1CxW35TOR2011

text: TRUE

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: TOR

text: Culex pipiens/restuans

text: mosquito

characteristic: longitude

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: Cx

text: Culex pipiens/restuans


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: UBERON:multicellular organism

text: UBERON:tissue

text: UBERON:gut

text: Culex pipiens/restuans R1CxW36TOR2011

text: TRUE

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: TOR

text: Culex pipiens/restuans

text: mosquito

text: mosquito metagenome

characteristic: organism

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: Cx

text: Culex pipiens/restuans


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: UBERON:multicellular organism

text: UBERON:tissue

text: UBERON:gut

text: Culex pipiens/restuans R1CxW37TOR2011

text: TRUE

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: TOR

text: Culex pipiens/restuans

text: mosquito

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

characteristic: public

text: mosquito tissue

text: mosquito metagenome

text: Cx

text: Culex pipiens/restuans


text: UCSDMI

text: public

characteristic: SRA accession

text: UBERON:multicellular organism

text: UBERON:tissue

text: UBERON:gut

text: Culex pipiens/restuans R1CxW38TOR2011

characteristic: description

text: TRUE

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: TOR

text: Culex pipiens/restuans

text: mosquito

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: Cx

text: Culex pipiens/restuans

characteristic: wnv


text: UCSDMI

text: public

characteristic: Submitter Id

text: UBERON:multicellular organism

text: UBERON:tissue

text: UBERON:gut

text: Culex pipiens/restuans R1CxW39TOR2011

text: TRUE

characteristic: elevation

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: TOR

text: Culex pipiens/restuans

text: mosquito

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: Cx

text: Culex pipiens/restuans

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

text: UBERON:multicellular organism

text: UBERON:tissue

text: UBERON:gut

text: Ochlerotatus canadensis R1OcanW25TOR2011

text: TRUE

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: TOR

text: Ochlerotatus canadensis

characteristic: host scientific name

text: mosquito

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: Ocan

text: Ochlerotatus canadensis


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: UBERON:multicellular organism

text: UBERON:tissue

text: UBERON:gut

text: Ochlerotatus canadensis R1OcanW26TOR2011

text: TRUE

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: TOR

text: Ochlerotatus canadensis

text: mosquito

characteristic: latitude

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: Ocan

text: Ochlerotatus canadensis


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: UBERON:multicellular organism

text: UBERON:tissue

text: UBERON:gut

text: Ochlerotatus stimulans R1OcsW27TOR2012

text: TRUE

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: TOR

text: Ochlerotatus stimulans

text: mosquito

characteristic: longitude

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: Ocs

text: Ochlerotatus stimulans


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: UBERON:multicellular organism

text: UBERON:tissue

text: UBERON:gut

text: Aedes vexans complex R4AvW23TOR2012

text: TRUE

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: TOR

text: Aedes vexans complex

text: mosquito

text: mosquito metagenome

characteristic: organism

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: Av

text: Aedes vexans complex


text: UCSDMI

text: public

characteristic: SRA accession

text: UBERON:multicellular organism

text: UBERON:tissue

text: UBERON:gut

text: Aedes vexans complex R4AvW25TOR2012

characteristic: description

text: TRUE

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: TOR

text: Aedes vexans complex

text: mosquito

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

characteristic: public

text: mosquito tissue

text: mosquito metagenome

text: Av

text: Aedes vexans complex

text: unknown


text: UCSDMI

text: public

characteristic: Submitter Id

text: UBERON:multicellular organism

text: UBERON:tissue

text: UBERON:gut

text: Aedes vexans complex R4AvW28TOR2012

text: TRUE

characteristic: elevation

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: TOR

text: Aedes vexans complex

text: mosquito

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: Av

text: Aedes vexans complex

characteristic: wnv


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

text: UBERON:multicellular organism

text: UBERON:tissue

text: UBERON:gut

text: Aedes vexans complex R4AvW32TOR2011

text: TRUE

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: TOR

text: Aedes vexans complex

text: mosquito

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: Av

text: Aedes vexans complex

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: UBERON:multicellular organism

text: UBERON:tissue

text: UBERON:gut

text: Aedes vexans complex R4AvW34TOR2011

text: TRUE

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: TOR

text: Aedes vexans complex

characteristic: host scientific name

text: mosquito

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: Av

text: Aedes vexans complex


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: UBERON:multicellular organism

text: UBERON:tissue

text: UBERON:gut

text: Aedes vexans complex R4AvW37TOR2011

text: TRUE

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: TOR

text: Aedes vexans complex

text: mosquito

characteristic: latitude

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: Av

text: Aedes vexans complex


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: UBERON:multicellular organism

text: UBERON:tissue

text: UBERON:gut

text: Aedes vexans complex R4AvW38TOR2011

text: TRUE

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: TOR

text: Aedes vexans complex

text: mosquito

characteristic: longitude

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: Av

text: Aedes vexans complex


text: UCSDMI

text: public

characteristic: SRA accession

text: UBERON:multicellular organism

text: UBERON:tissue

text: UBERON:gut

text: Culex pipiens/restuans R4CxW24TOR2012

characteristic: description

text: TRUE

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: TOR

text: Culex pipiens/restuans

text: mosquito

text: mosquito metagenome

characteristic: organism

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: Cx

text: Culex pipiens/restuans


text: UCSDMI

text: public

characteristic: Submitter Id

text: UBERON:multicellular organism

text: UBERON:tissue

text: UBERON:gut

text: Culex pipiens/restuans R4CxW25TOR2011

text: TRUE

characteristic: elevation

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: TOR

text: Culex pipiens/restuans

text: mosquito

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

characteristic: public

text: mosquito tissue

text: mosquito metagenome

text: Cx

text: Culex pipiens/restuans


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

text: UBERON:multicellular organism

text: UBERON:tissue

text: UBERON:gut

text: Culex pipiens/restuans R4CxW25TOR2012

text: TRUE

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: TOR

text: Culex pipiens/restuans

text: mosquito

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: Cx

text: Culex pipiens/restuans

characteristic: wnv


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: UBERON:multicellular organism

text: UBERON:tissue

text: UBERON:gut

text: Culex pipiens/restuans R4CxW26TOR2011

text: TRUE

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: TOR

text: Culex pipiens/restuans

text: mosquito

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: Cx

text: Culex pipiens/restuans

characteristic: title


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: UBERON:multicellular organism

text: UBERON:tissue

text: UBERON:gut

text: Culex pipiens/restuans R4CxW26TOR2012

text: TRUE

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: TOR

text: Culex pipiens/restuans

characteristic: host scientific name

text: mosquito

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: Cx

text: Culex pipiens/restuans


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: UBERON:multicellular organism

text: UBERON:tissue

text: UBERON:gut

text: Culex pipiens/restuans R4CxW27TOR2011

text: TRUE

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: TOR

text: Culex pipiens/restuans

text: mosquito

characteristic: latitude

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: Cx

text: Culex pipiens/restuans


text: UCSDMI

text: public

characteristic: SRA accession

text: UBERON:multicellular organism

text: UBERON:tissue

text: UBERON:gut

text: Culex pipiens/restuans R4CxW27TOR2012

characteristic: description

text: TRUE

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: TOR

text: Culex pipiens/restuans

text: mosquito

characteristic: longitude

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: Cx

text: Culex pipiens/restuans


text: UCSDMI

text: public

characteristic: Submitter Id

text: UBERON:multicellular organism

text: UBERON:tissue

text: UBERON:gut

text: Culex pipiens/restuans R4CxW28TOR2011

text: TRUE

characteristic: elevation

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: TOR

text: Culex pipiens/restuans

text: mosquito

text: mosquito metagenome

characteristic: organism

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: Cx

text: Culex pipiens/restuans


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

text: UBERON:multicellular organism

text: UBERON:tissue

text: UBERON:gut

text: Culex pipiens/restuans R4CxW28TOR2012

text: TRUE

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: TOR

text: Culex pipiens/restuans

text: mosquito

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

characteristic: public

text: mosquito tissue

text: mosquito metagenome

text: Cx

text: Culex pipiens/restuans


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: UBERON:multicellular organism

text: UBERON:tissue

text: UBERON:gut

text: Culex pipiens/restuans R4CxW30TOR2011

text: TRUE

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: TOR

text: Culex pipiens/restuans

text: mosquito

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: Cx

text: Culex pipiens/restuans

characteristic: wnv


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: UBERON:multicellular organism

text: UBERON:tissue

text: UBERON:gut

text: Culex pipiens/restuans R4CxW31TOR2011

text: TRUE

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: TOR

text: Culex pipiens/restuans

text: mosquito

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: Cx

text: Culex pipiens/restuans

characteristic: title


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: UBERON:multicellular organism

text: UBERON:tissue

text: UBERON:gut

text: Culex pipiens/restuans R4CxW32TOR2011

text: TRUE

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: TOR

text: Culex pipiens/restuans

characteristic: host scientific name

text: mosquito

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: Cx

text: Culex pipiens/restuans


text: UCSDMI

text: public

characteristic: SRA accession

text: UBERON:multicellular organism

text: UBERON:tissue

text: UBERON:gut

text: Culex pipiens/restuans R4CxW33TOR2011

characteristic: description

text: TRUE

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: TOR

text: Culex pipiens/restuans

text: mosquito

characteristic: latitude

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: Cx

text: Culex pipiens/restuans


text: UCSDMI

text: public

characteristic: Submitter Id

text: UBERON:multicellular organism

text: UBERON:tissue

text: UBERON:gut

text: Culex pipiens/restuans R4CxW34TOR2011

text: TRUE

characteristic: elevation

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: TOR

text: Culex pipiens/restuans

text: mosquito

characteristic: longitude

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: Cx

text: Culex pipiens/restuans


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

text: UBERON:multicellular organism

text: UBERON:tissue

text: UBERON:gut

text: Culex pipiens/restuans R4CxW35TOR2011

text: TRUE

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: TOR

text: Culex pipiens/restuans

text: mosquito

text: mosquito metagenome

characteristic: organism

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: Cx

text: Culex pipiens/restuans


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: UBERON:multicellular organism

text: UBERON:tissue

text: UBERON:gut

text: Culex pipiens/restuans R4CxW36TOR2011

text: TRUE

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: TOR

text: Culex pipiens/restuans

text: mosquito

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

characteristic: public

text: mosquito tissue

text: mosquito metagenome

text: Cx

text: Culex pipiens/restuans


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: UBERON:multicellular organism

text: UBERON:tissue

text: UBERON:gut

text: Culex pipiens/restuans R4CxW38TOR2011

text: TRUE

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: TOR

text: Culex pipiens/restuans

text: mosquito

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: Cx

text: Culex pipiens/restuans

characteristic: wnv


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: UBERON:multicellular organism

text: UBERON:tissue

text: UBERON:gut

text: Culex pipiens/restuans R4CxW39TOR2011

text: TRUE

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: TOR

text: Culex pipiens/restuans

text: mosquito

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: Cx

text: Culex pipiens/restuans

characteristic: title


text: UCSDMI

text: public

characteristic: SRA accession

text: UBERON:multicellular organism

text: UBERON:tissue

text: UBERON:gut

text: Aedes vexans complex TAvW30BRN2012

characteristic: description

text: TRUE

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: BRN

text: Aedes vexans complex

characteristic: host scientific name

text: mosquito

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: T

text: Av

text: Aedes vexans complex


text: UCSDMI

text: public

characteristic: Submitter Id

text: UBERON:multicellular organism

text: UBERON:tissue

text: UBERON:gut

text: Ochlerotatus japonicus Y12B1OjW30PEE2012

text: TRUE

characteristic: elevation

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: PEE

text: Ochlerotatus japonicus

text: mosquito

characteristic: latitude

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: Oj

text: Ochlerotatus japonicus


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

text: UBERON:multicellular organism

text: UBERON:tissue

text: UBERON:gut

text: Ochlerotatus japonicus Y12D1OjW30PEE2012

text: TRUE

text: temperate biome

text: insecta-associated habitat

text: organic material

text: host-associated

text: Canada

text: PEE

text: Ochlerotatus japonicus

text: mosquito

characteristic: longitude

text: mosquito metagenome

text: U Toronto

text: FALSE

text: TRUE

text: mosquito tissue

text: mosquito metagenome

text: Oj

text: Ochlerotatus japonicus


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

tag: Namespace:Department of Biomedical Sciences, Seoul National University Graduate School

text: house mouse

characteristic: common name

text: Mus musculus

characteristic: organism

text: Mus musculus


text: Department of Biomedical Sciences, Seoul National University Graduate School

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: house mouse

text: Mus musculus

text: Mus musculus


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: house mouse

text: Mus musculus

text: Mus musculus

text: All cell-1


text: public

characteristic: SRA accession

text: house mouse

text: Mus musculus

text: Mus musculus

text: All cell-2

characteristic: title


text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: All cell-3


text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: All cell-4


text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: All cell-5


text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: All cell-6


text: Smithsonian Institution NMNH

text: public

tag: Namespace:Smithsonian Institution NMNH

text: Transcriptome of Haliclystus auricula

characteristic: description

text: Haliclystus auricula

text: Haliclystus auricula

text: Haliclystus auricula transcriptome


text: URMITE

text: public

characteristic: Submitter Id

text: Oceanobacillus timonensis strain Marseille-P3532T was isolated from stool sample

text: Oceanobacillus timonensis

text: Oceanobacillus timonensis

characteristic: strain

text: Oceanobacillus timonensis genome


text: URMITE

text: public

text: Culturomics to increase the human bacterial repertoire

text: Bacillus marisflavi

text: Bacillus marisflavi

text: Bacillus marisflavi genome


text: University Hospital Galway

text: public

tag: Namespace:University Hospital Galway

characteristic: collection date

text: Ireland

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

characteristic: isolate

text: Human

text: Salmonella enterica subsp. enterica serovar Agama

text: Agama

characteristic: serovar

text: Subsp. I


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University Hospital Galway

text: public

text: Ireland

text: not applicable

text: Homo sapiens

text: Human

text: Salmonella enterica subsp. enterica serovar Enteritidis

text: Enteritidis

text: Subsp. I


text: University Hospital Galway

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Ireland

text: not applicable

text: Homo sapiens

text: Human

text: Salmonella enterica subsp. enterica serovar Mbandaka

characteristic: organism

text: Mbandaka

text: Subsp. I


text: University Hospital Galway

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Ireland

text: not applicable

text: Homo sapiens

text: Human

text: Salmonella enterica subsp. enterica serovar Typhimurium

text: Typhimurium

text: Subsp. I

characteristic: title


text: URMITE

text: public

characteristic: Submitter Id

characteristic: description

text: Bacillus gottheilii

text: Bacillus gottheilii

characteristic: strain

text: Bacillus gottheilii genome


text: URMITE

text: public

text: Halobacillus hunanensis

text: Halobacillus hunanensis

text: Halobacillus hunanensis genome


text: Staphylococcus aureus

characteristic: ArrayExpress-Species

text: SC

text: public

text: Staphylococcus aureus

characteristic: common name

text: Staphylococcus aureus

text: Staphylococcus aureus


text: University Hospital Galway

text: public

characteristic: collection date

text: Ireland

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

characteristic: isolate

text: Human

text: Salmonella enterica subsp. enterica serovar Muenchen

text: Muenchen

characteristic: serovar

text: Subsp. I


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University Hospital Galway

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Ireland

text: not applicable

text: Homo sapiens

text: Human

text: Salmonella enterica subsp. enterica serovar Dublin

text: Dublin

text: Subsp. I


text: University Hospital Galway

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Ireland

text: not applicable

text: Homo sapiens

text: Human

text: Salmonella enterica subsp. enterica serovar Saintpaul

characteristic: organism

text: Saintpaul

text: Subsp. I

characteristic: title


text: University Hospital Galway

text: public

characteristic: collection date

text: Ireland

characteristic: geographic location (country and/or sea)

text: not applicable

text: Homo sapiens

text: Human

text: Salmonella enterica subsp. enterica serovar Bovismorbificans

text: Bovismorbificans

text: Subsp. I


text: public

tag: Namespace:Philipps-University Marburg, Institute of Molecular Oncology and Genomics Core Facility, Center for Tumor and Immunobiology

unit: week

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: Protocols: Mouse ear dorsal-epidermis and tail skin were homogenized in QIAzol Lysis Reagent (Qiagen, Hilden, Germany) with a TissueLyser (Qiagen) according to the manufacturer’s protocol. Tail and ear cells were pooled. Csnk1a1 floxed and Csnk1a1/p53 double-floxed mice were reported before.14 K14-Cre-ERT2 mice, purchased from the Jackson Lab (Bar Harbor, ME, USA) were used as a skin-specific deleter strain. Csnk1a1△skin and Csnk1a1/p53△skin mice were developed by crossing Csnk1a1 floxed or Csnk1a1/p53 floxed mice with K14-Cre-ERT2 mice. Mice were bred at the National Laboratory Animal Center, Tainan, Taiwan, and were maintained at an SPF animal facility at China Medical University. CK1a knock-out and CK1a/p53 double knock-out mice where treated topically with 4-hydroxytamoxifen (4HT; H6278, Sigma) dissolved in 99.9% alcohol (32205, Sigma) everyday for 2 weeks (1.5mg/0.5ml). To compare the effect of CK1a ablation in the epidermis with UV exposure, UVB mice where exposed to UV irradiation (150 mJ/cm^2) every other day for 2 weeks. Epidermis was taken at different time points for transcriptome analysis (7 and 14 days). Following chloroform extraction, ethanol precipitation and DNase digestion, RNA was purified using an RNeasy Mini Kit (Qiagen). RNASeq libraries were prepared using a TruSeq Stranded mRNA Sample Prep kit (Illumina, Tokyo, Japan).

characteristic: description

text: K14-Cre-ERT2 / CK1 fl/fl / p53 fl/fl

characteristic: genotype

text: not applicable

text: Mus musculus

text: Mus musculus

text: epidermis

characteristic: organism part

text: keratinocyte-specific knockout of Csnk1a1 and p53

characteristic: phenotype

text: Mus musculus

text: male

characteristic: sex

type: has member


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Philipps-University Marburg, Institute of Molecular Oncology and Genomics Core Facility, Center for Tumor and Immunobiology

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ArrayExpress

text: house mouse

text: Protocols: Mouse ear dorsal-epidermis and tail skin were homogenized in QIAzol Lysis Reagent (Qiagen, Hilden, Germany) with a TissueLyser (Qiagen) according to the manufacturer’s protocol. Tail and ear cells were pooled. Csnk1a1 floxed and Csnk1a1/p53 double-floxed mice were reported before.14 K14–Cre–ERT2 mice, purchased from the Jackson Lab (Bar Harbor, ME, USA) were used as a skin-specific deleter strain. Csnk1a1△skin and Csnk1a1/p53△skin mice were developed by crossing Csnk1a1 floxed or Csnk1a1/p53 floxed mice with K14–Cre–ERT2 mice. Mice were bred at the National Laboratory Animal Center, Tainan, Taiwan, and were maintained at an SPF animal facility at China Medical University. CK1a knock-out and CK1a/p53 double knock-out mice where treated topically with 4-hydroxytamoxifen (4HT; H6278, Sigma) dissolved in 99.9% alcohol (32205, Sigma) everyday for 2 weeks (1.5mg/0.5ml). To compare the effect of CK1a ablation in the epidermis with UV exposure, UVB mice where exposed to UV irradiation (150 mJ/cm^2) every other day for 2 weeks. Epidermis was taken at different time points for transcriptome analysis (7 and 14 days). Following chloroform extraction, ethanol precipitation and DNase digestion, RNA was purified using an RNeasy Mini Kit (Qiagen). RNASeq libraries were prepared using a TruSeq Stranded mRNA Sample Prep kit (Illumina, Tokyo, Japan).

text: K14-Cre-ERT2 / CK1 fl/fl / p53 fl/fl

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: epidermis

text: Mus musculus

text: male


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: house mouse

text: K14-Cre-ERT2 / CK1 fl/fl / p53 fl/fl

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: epidermis

text: Mus musculus

text: male

characteristic: title


text: public

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

characteristic: description

text: K14-Cre-ERT2 / CK1 fl/fl

characteristic: genotype

text: not applicable

text: Mus musculus

text: Mus musculus

text: epidermis

text: keratinocyte-specific knockout of Csnk1a1

text: Mus musculus

text: male


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: ArrayExpress

text: house mouse

text: K14-Cre-ERT2 / CK1 fl/fl

text: not applicable

text: Mus musculus

text: Mus musculus

text: epidermis

characteristic: organism part

characteristic: phenotype

text: Mus musculus

text: male

characteristic: sex


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ArrayExpress

text: house mouse

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: epidermis

text: wild type phenotype

text: Mus musculus

text: male


text: Saolta

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: IRL

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Escherichia

characteristic: genus

text: Ireland

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: host

text: not applicable

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Human

text: gastrointestinal system

text: Escherichia coli

characteristic: organism

text: Escherichia coli

type: AMR curated data - CABBAGE

value: gentamicin

value: EUCAST

value: broth dilution

value: Vitek

value: susceptible

value: Escherichia coli

value: ampicillin

value: resistant

value: amoxicillin-clavulanic acid

value: cefpodoxime-clavulanic acid

value: amikacin

value: cefotaxime

value: tigecycline

value: cefpodoxime

value: piperacillin-tazobactam

value: tobramycin

value: cefoxitin

value: ertapenem


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Saolta

text: public

text: IRL

text: Escherichia

text: Ireland

text: Homo sapiens

text: not applicable

text: Homo sapiens

text: Human

text: gastrointestinal system

text: Escherichia coli

text: Escherichia coli

characteristic: title

value: EUCAST

value: meropenem

value: intermediate

value: gentamicin


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Saolta

characteristic: INSDC center name

text: public

text: IRL

text: Escherichia

text: Ireland

text: Homo sapiens

text: not applicable

text: Homo sapiens

text: Human

text: gastrointestinal system

text: Escherichia coli

text: Escherichia coli

value: broth dilution

value: Vitek

value: Escherichia coli

value: susceptible


text: Saolta

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: IRL

text: Escherichia

text: Ireland

text: Homo sapiens

text: not applicable

text: Homo sapiens

characteristic: isolate

text: Human

text: gastrointestinal system

text: Escherichia coli

text: Escherichia coli

value: resistant

value: amoxicillin-clavulanic acid

value: ampicillin

value: cefpodoxime-clavulanic acid


text: Saolta

text: public

characteristic: INSDC status

text: IRL

characteristic: SRA accession

characteristic: Submitter Id

text: Escherichia

text: Ireland

text: Homo sapiens

text: not applicable

text: Homo sapiens

text: Human

text: urinary tract

text: Escherichia coli

text: Escherichia coli

value: cefpodoxime

value: cefotaxime

value: tigecycline


text: Saolta

text: public

text: IRL

characteristic: collection date

text: Escherichia

characteristic: genus

text: Ireland

characteristic: geographic location (country and/or sea)

text: Homo sapiens

text: not applicable

text: Homo sapiens

text: Human

text: gastrointestinal system

text: Escherichia coli

text: Escherichia coli

value: tobramycin

value: piperacillin-tazobactam

value: amikacin

value: cefoxitin


text: Saolta

text: public

text: IRL

text: Escherichia

text: Ireland

text: Homo sapiens

characteristic: host

text: not applicable

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Human

text: gastrointestinal system

text: Escherichia coli

text: Escherichia coli

value: EUCAST

value: intermediate

value: ertapenem

value: meropenem


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Saolta

text: public

text: IRL

text: Escherichia

text: Ireland

text: Homo sapiens

text: not applicable

text: Homo sapiens

text: Human

text: gastrointestinal system

text: Escherichia coli

characteristic: organism

text: Escherichia coli

value: broth dilution

value: Vitek

value: Escherichia coli


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Saolta

text: public

text: IRL

text: Escherichia

text: Ireland

text: Homo sapiens

text: not applicable

text: Homo sapiens

text: Human

text: gastrointestinal system

text: Escherichia coli

text: Escherichia coli

characteristic: title

value: resistant

value: susceptible

value: gentamicin

value: amoxicillin-clavulanic acid


text: PUBLIC HEALTH ENGLAND

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:PUBLIC HEALTH ENGLAND

text: Staphylococcus aureus

text: Staphylococcus aureus

text: Armenia profile


text: PUBLIC HEALTH ENGLAND

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Staphylococcus aureus

text: Staphylococcus aureus

text: Armenian profile


text: University Hospital Galway

text: public

characteristic: Submitter Id

characteristic: collection date

text: Ireland

text: not applicable

text: Homo sapiens

characteristic: isolate

text: Human

text: Typhimurium

characteristic: serovar

text: Subsp. I


text: University Hospital Galway

text: public

text: Ireland

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: host health state

text: Homo sapiens

text: Human

text: Enteritidis

text: Subsp. I


characteristic: ENA-CHECKLIST

text: University Hospital Galway

text: public

text: Ireland

text: not applicable

text: Homo sapiens

characteristic: host scientific name

text: Human

text: Salmonella enterica subsp. enterica serovar Typhimurium var. monophasic 4,[5],12:i:-

text: Subsp. I


characteristic: ENA-FIRST-PUBLIC

text: University Hospital Galway

text: public

text: Ireland

text: not applicable

text: Homo sapiens

text: Human

text: Salmonella enterica subsp. enterica serovar Bareilly

characteristic: organism

text: Bareilly

text: Subsp. I


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University Hospital Galway

text: public

text: Ireland

text: not applicable

text: Homo sapiens

text: Human

text: Salmonella enterica subsp. enterica serovar Coeln

text: Coeln

text: Subsp. I


text: University Hospital Galway

characteristic: INSDC center name

text: public

text: Ireland

text: not applicable

text: Homo sapiens

text: Human

text: Salmonella enterica subsp. enterica serovar Tennessee

text: Tennessee

text: Subsp. I

characteristic: title


characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:Centre for Integrative Physiology, University of Edinburgh

text: ArrayExpress

characteristic: broker name

text: ESC-derived neuron

text: house mouse

characteristic: common name

text: Protocols: The hESC line H9 was used, and obtained from WiCell (Madison, WI) under full ethical / IRB approval of the University of Edinburgh. hESCs were maintained on CF-1 irradiated mouse embryonic fibroblasts, neurally converted to anterior-patterned neural precursor cells (NPCs) in suspension in chemically defined medium, whereupon neural rosettes were mechanically iso- lated, dissociated and plated for proliferative expansion. For differentiation of anterior NPCs, they were plated in default media (A-DMEM/F12, 1% P/S, 0.5% Glutamax, 0.5% N2, 0.2% B27, 2 mg/mL Heparin (Sigma)) on poly-D-lysine (Sigma), laminin (Sigma), fibronectin (Sigma) and matrigel coated coverslips for differentiation and fed twice a week. Default media was supplemented with 10 mM forskolin (Tocris) in weeks 2 and 3. From week 4 onwards forskolin was removed and default media was supplemented with 5 ng/mL BDNF and 5 ng/mL GDNF. Experiments were performed 5 weeks after the differentiation of anterior NPCs was commenced. Mouse ES cells (E14tg2a) were maintained in GMEM (Sigma) supplemented with 2-mercaptoethanol (Gibco), non-essential amino acids (Gibco), glutamine, pyruvate, 10% foetal calf serum (Gibco) and 100 units/ml LIF (made in-house) on gelatinised tissue culture flasks. Monolayer neural differentiation was modified here to include cyclopamine. ES cells were washed to remove all traces of serum and then plated at a density of 1x10^4 cells/cm2 onto gelatin-coated tissue culture plastic in N2B27 serum-free medium. N2B27 consists of a 1:1 ratio of DMEM/F12 and Neurobasal media (Gibco) supplemented with 0.5% modified N2 (made in house, 1% B27 (Gibco), 2- mercaptoethanol (Gibco), 2 mM L-Glutamine, and 1uM Cyclopamine (Sigma)). Medium was changed every day. Cells were cultured for 9 days under these conditions before transferring to terminal differentiation conditions. Terminal differentiation of mouse NPCs into dorsal forebrain (cortical) neurons was achieved by withdrawal of cyclopamine from day 9 NPCs dissociated into single cells, with Accutase (Life technologies), and re-plated on Matrigel (SLS, 354230; 1 in 100 dilution), Fibronectin 20 mg/ml (F2006 - Sigma-Aldrich), Laminin 10 mg/ml (L2020 - Sigma-Aldrich) coated coverslips at a density of 30,000 cells per 0.3 cm2. Addition of 5 mM AraC on day 10, for 24 hr, was used to remove residual proliferating cells. Differentiating cortical neurons were maintained for a further 12-14 days, with media changes every 2-3 days, in Advanced DMEM/F12 (Invitrogen) containing: 1% N-2 supplement (Invitrogen), 1% B27 supplement (Invitrogen), 1% penicillin/ streptomycin (Invitrogen), 0.5% GlutaMAX (Invitrogen), and 5 mg/ml heparin (Sigma), supplemented with 1 mM N-acetyl cysteine (Sigma) and 10 ng/ml BDNF (R&D Systems) and finally processed for RNA-seq. Cortical mouse neurons were cultured from either wild-type CD1 mice or Tc1 mice at a density of between 9-13x10^4 neurons per cm2 from E17.5 mice with Neurobasal growth medium supplemented with B27 (Invitrogen, Paisley, UK). Stimulations of cultured neurons were done after a culturing period of 9-11 days during which neurons develop a network of processes, express functional NMDA-type and AMPA/kainate-type glutamate receptors, and form synaptic contacts. Prior to stimulation, neurons were first placed overnight into a minimal defined medium containing 10% MEM (Invitrogen), 90% Salt-Glucose-Glycine (SGG) medium (SGG: 114 mM NaCl, 0.219% NaHCO3, 5.292 mM KCl, 1 mM MgCl2, 2 mM CaCl2, 10 mM HEPES, 1 mM Glycine, 30 mM Glucose, 0.5 mM sodium pyruvate, 0.1% Phenol Red; osmolarity 325 mosm/l). KCl/FPL stimulation involved neurons being exposed to 50 mM KCl by adding 0.41 volumes of KCl depolarization solution (10 mM HEPES, pH 7.2, 170 mM KCl, 1 mM MgCl2, 2 mM CaCl2) in the presence of 5 mM FPL64176 (Tocris), plus an NMDA receptor antagonist (MK-801, 5 mM) to prevent any excitotoxicity. Cells were lysed and RNA extracted at 4h post-stimulation. Total RNA was assessed for quality (Agilent Bionalyzer) and quantity (Invitrogen Qubit) before library preparation. Illumina libraries were prepared from 1 mg of total RNA using TruSeq RNA Sample Prep Kit v2 with a 10 cycle enrichment step as per the manufacturer’s recommendations. Final libraries were pooled in equimolar proportions.

characteristic: description

text: Not applicable

characteristic: developmental stage

text: not applicable

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Control

characteristic: stimulus

characteristic: strain


text: Centre for Integrative Physiology, University of Edinburgh

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: ESC-derived neuron

text: house mouse

text: Not applicable

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: 4 hours post KCl-induced membrane depolarisation


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: ArrayExpress

text: primary cortical neuron

text: house mouse

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Mus musculus

text: Control


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: ArrayExpress

text: primary cortical neuron

text: house mouse

text: not applicable

text: Mus musculus

text: Mus musculus

text: Mus musculus


characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ArrayExpress

text: primary cortical neuron

text: house mouse

text: Protocols: The hESC line H9 was used, and obtained from WiCell (Madison, WI) under full ethical / IRB approval of the University of Edinburgh. hESCs were maintained on CF-1 irradiated mouse embryonic fibroblasts, neurally converted to anterior-patterned neural precursor cells (NPCs) in suspension in chemically defined medium, whereupon neural rosettes were mechanically iso- lated, dissociated and plated for proliferative expansion. For differentiation of anterior NPCs, they were plated in default media (A-DMEM/F12, 1% P/S, 0.5% Glutamax, 0.5% N2, 0.2% B27, 2 mg/mL Heparin (Sigma)) on poly-D-lysine (Sigma), laminin (Sigma), fibronectin (Sigma) and matrigel coated coverslips for differentiation and fed twice a week. Default media was supplemented with 10 mM forskolin (Tocris) in weeks 2 and 3. From week 4 onwards forskolin was removed and default media was supplemented with 5 ng/mL BDNF and 5 ng/mL GDNF. Experiments were performed 5 weeks after the differentiation of anterior NPCs was commenced. Mouse ES cells (E14tg2a) were maintained in GMEM (Sigma) supplemented with 2-mercaptoethanol (Gibco), non-essential amino acids (Gibco), glutamine, pyruvate, 10% foetal calf serum (Gibco) and 100 units/ml LIF (made in-house) on gelatinised tissue culture flasks. Monolayer neural differentiation was modified here to include cyclopamine. ES cells were washed to remove all traces of serum and then plated at a density of 1x10^4 cells/cm2 onto gelatin-coated tissue culture plastic in N2B27 serum-free medium. N2B27 consists of a 1:1 ratio of DMEM/F12 and Neurobasal media (Gibco) supplemented with 0.5% modified N2 (made in house, 1% B27 (Gibco), 2- mercaptoethanol (Gibco), 2 mM L-Glutamine, and 1uM Cyclopamine (Sigma)). Medium was changed every day. Cells were cultured for 9 days under these conditions before transferring to terminal differentiation conditions. Terminal differentiation of mouse NPCs into dorsal forebrain (cortical) neurons was achieved by withdrawal of cyclopamine from day 9 NPCs dissociated into single cells, with Accutase (Life technologies), and re-plated on Matrigel (SLS, 354230; 1 in 100 dilution), Fibronectin 20 mg/ml (F2006 – Sigma-Aldrich), Laminin 10 mg/ml (L2020 – Sigma-Aldrich) coated coverslips at a density of 30,000 cells per 0.3 cm2. Addition of 5 mM AraC on day 10, for 24 hr, was used to remove residual proliferating cells. Differentiating cortical neurons were maintained for a further 12–14 days, with media changes every 2–3 days, in Advanced DMEM/F12 (Invitrogen) containing: 1% N-2 supplement (Invitrogen), 1% B27 supplement (Invitrogen), 1% penicillin/ streptomycin (Invitrogen), 0.5% GlutaMAX (Invitrogen), and 5 mg/ml heparin (Sigma), supplemented with 1 mM N-acetyl cysteine (Sigma) and 10 ng/ml BDNF (R&D Systems) and finally processed for RNA-seq. Cortical mouse neurons were cultured from either wild-type CD1 mice or Tc1 mice at a density of between 9–13x10^4 neurons per cm2 from E17.5 mice with Neurobasal growth medium supplemented with B27 (Invitrogen, Paisley, UK). Stimulations of cultured neurons were done after a culturing period of 9–11 days during which neurons develop a network of processes, express functional NMDA-type and AMPA/kainate-type glutamate receptors, and form synaptic contacts. Prior to stimulation, neurons were first placed overnight into a minimal defined medium containing 10% MEM (Invitrogen), 90% Salt-Glucose-Glycine (SGG) medium (SGG: 114 mM NaCl, 0.219% NaHCO3, 5.292 mM KCl, 1 mM MgCl2, 2 mM CaCl2, 10 mM HEPES, 1 mM Glycine, 30 mM Glucose, 0.5 mM sodium pyruvate, 0.1% Phenol Red; osmolarity 325 mosm/l). KCl/FPL stimulation involved neurons being exposed to 50 mM KCl by adding 0.41 volumes of KCl depolarization solution (10 mM HEPES, pH 7.2, 170 mM KCl, 1 mM MgCl2, 2 mM CaCl2) in the presence of 5 mM FPL64176 (Tocris), plus an NMDA receptor antagonist (MK-801, 5 mM) to prevent any excitotoxicity. Cells were lysed and RNA extracted at 4h post-stimulation. Total RNA was assessed for quality (Agilent Bionalyzer) and quantity (Invitrogen Qubit) before library preparation. Illumina libraries were prepared from 1 mg of total RNA using TruSeq RNA Sample Prep Kit v2 with a 10 cycle enrichment step as per the manufacturer’s recommendations. Final libraries were pooled in equimolar proportions.

text: not applicable

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Control

characteristic: title


text: public

text: ArrayExpress

characteristic: broker name

text: ESC-derived neuron

text: house mouse

characteristic: common name

characteristic: description

text: Not applicable

text: not applicable

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Control


text: public

text: ArrayExpress

text: ESC-derived neuron

text: house mouse

text: Not applicable

characteristic: developmental stage

text: not applicable

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Control

characteristic: stimulus

characteristic: strain


text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: ESC-derived neuron

text: human

text: Not applicable

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Control

text: Not applicable


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: ArrayExpress

text: ESC-derived neuron

text: human

text: Not applicable

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Not applicable


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: ArrayExpress

text: ESC-derived neuron

text: human

text: Not applicable

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Homo sapiens

text: Not applicable


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ArrayExpress

text: primary cortical neuron

text: house mouse

text: not applicable

text: Mus musculus

text: Mus musculus

text: Mus musculus


text: UCSDMI

text: public

text: Well C12 1028

text: TRUE

characteristic: elevation

text: urban biome

text: research facility

text: organic material

text: microbial mat/biofilm

text: USA:CO:Boulder

text: TRUE

text: Not applicable

characteristic: host scientific name

text: Not applicable

text: Not applicable

characteristic: latitude

characteristic: longitude

text: metagenome

text: UCSDMI

text: FALSE

characteristic: project

text: TRUE

characteristic: public

text: culture

text: metagenome

text: Primer test 515fBC 806r 2014

characteristic: title


text: UCSDMI

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Well E10 1193

characteristic: description

text: TRUE

text: urban biome

text: research facility

text: feces

text: human-gut

text: USA:CO:Boulder

text: TRUE

text: Homo sapiens

text: human

text: human gut metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: stool

text: human gut metagenome

text: Primer test 515fBC 806r 2014


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

text: public

text: Well H10 1892

text: TRUE

text: urban biome

text: research facility

text: feces

text: human-gut

text: USA:CO:Boulder

text: TRUE

text: Homo sapiens

text: human

text: human gut metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: stool

text: human gut metagenome

text: Primer test 515fBC 806r 2014


characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

text: Well G10 2036

text: TRUE

text: urban biome

text: research facility

text: feces

text: human-gut

text: USA:CO:Boulder

text: TRUE

text: Homo sapiens

text: human

text: human gut metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

text: stool

text: human gut metagenome

text: Primer test 515fBC 806r 2014


text: UCSDMI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Well F10 2818

text: TRUE

characteristic: elevation

text: urban biome

text: research facility

text: feces

text: human-gut

text: USA:CO:Boulder

text: TRUE

text: Homo sapiens

text: human

text: human gut metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: stool

text: human gut metagenome

text: Primer test 515fBC 806r 2014


text: UCSDMI

text: public

text: Well E8 3.6.13CtrlC

text: TRUE

text: urban biome

text: research facility

text: soil

text: soil

text: USA:CO:Boulder

text: TRUE

text: Not applicable

characteristic: host scientific name

text: Not applicable

text: Not applicable

characteristic: latitude

characteristic: longitude

text: soil metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: soil

text: soil metagenome

text: Primer test 515fBC 806r 2014


text: UCSDMI

text: public

text: Well G8 3.7.13.A

text: TRUE

text: urban biome

text: research facility

text: soil

text: soil

text: USA:CO:Boulder

text: TRUE

text: Not applicable

text: Not applicable

text: Not applicable

text: soil metagenome

text: UCSDMI

text: FALSE

characteristic: project

text: TRUE

characteristic: public

text: soil

text: soil metagenome

text: Primer test 515fBC 806r 2014

characteristic: title


text: UCSDMI

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Well H8 3.8.13.B

text: TRUE

text: urban biome

text: research facility

text: soil

text: soil

text: USA:CO:Boulder

text: TRUE

text: Not applicable

text: Not applicable

text: Not applicable

text: soil metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: soil

text: soil metagenome

text: Primer test 515fBC 806r 2014


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

text: Well A9 3.9.13CtrlB

characteristic: description

text: TRUE

text: urban biome

text: research facility

text: soil

text: soil

text: USA:CO:Boulder

text: TRUE

text: Not applicable

text: Not applicable

text: Not applicable

text: soil metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: soil

text: soil metagenome

text: Primer test 515fBC 806r 2014


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

text: Well D10 4206

text: TRUE

text: urban biome

text: research facility

text: sebum

text: human-skin

text: USA:CO:Boulder

text: TRUE

text: Homo sapiens

text: human

text: human skin metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: skin

text: human skin metagenome

text: Primer test 515fBC 806r 2014


text: UCSDMI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Well F9 5.11.13.S.CtrlA

text: TRUE

text: urban biome

text: research facility

text: soil

text: soil

text: USA:CO:Boulder

text: TRUE

text: Not applicable

text: Not applicable

text: Not applicable

text: soil metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

text: soil

text: soil metagenome

text: Primer test 515fBC 806r 2014


text: UCSDMI

text: public

text: Well E9 5.11.13.S.RA.G

text: TRUE

characteristic: elevation

text: urban biome

text: research facility

text: soil

text: soil

text: USA:CO:Boulder

text: TRUE

text: Not applicable

characteristic: host scientific name

text: Not applicable

text: Not applicable

characteristic: latitude

text: soil metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: soil

text: soil metagenome

text: Primer test 515fBC 806r 2014


text: UCSDMI

text: public

text: Well G9 5.13.13.S.LA.F

text: TRUE

text: urban biome

text: research facility

text: soil

text: soil

text: USA:CO:Boulder

text: TRUE

text: Not applicable

text: Not applicable

text: Not applicable

characteristic: longitude

text: soil metagenome

text: UCSDMI

text: FALSE

characteristic: project

text: TRUE

characteristic: public

text: soil

text: soil metagenome

text: Primer test 515fBC 806r 2014


text: UCSDMI

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Well F9 5.11.13.S.CtrlA old plate

text: TRUE

text: urban biome

text: research facility

text: soil

text: soil

text: USA:CO:Boulder

text: TRUE

text: Not applicable

text: Not applicable

text: Not applicable

text: soil metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: soil

text: soil metagenome

text: Primer test 515fBC 806r 2014

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

characteristic: Submitter Id

text: Well D9 5.9.13.S.CtrlB

text: TRUE

text: urban biome

text: research facility

text: soil

text: soil

text: USA:CO:Boulder

text: TRUE

text: Not applicable

text: Not applicable

text: Not applicable

text: soil metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: soil

text: soil metagenome

text: Primer test 515fBC 806r 2014


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: Well C9 5.9.13.S.H.A

characteristic: description

text: TRUE

text: urban biome

text: research facility

text: soil

text: soil

text: USA:CO:Boulder

text: TRUE

text: Not applicable

text: Not applicable

text: Not applicable

text: soil metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: soil

text: soil metagenome

text: Primer test 515fBC 806r 2014


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Well B10 5081

text: TRUE

text: urban biome

text: research facility

text: sebum

text: human-skin

text: USA:CO:Boulder

text: TRUE

text: Homo sapiens

text: human

text: human skin metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: skin

text: human skin metagenome

text: Primer test 515fBC 806r 2014


text: UCSDMI

text: public

text: Well A10 5289

text: TRUE

characteristic: elevation

text: urban biome

text: research facility

text: sebum

text: human-skin

text: USA:CO:Boulder

text: TRUE

text: Homo sapiens

characteristic: host scientific name

text: human

text: human skin metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

text: skin

text: human skin metagenome

text: Primer test 515fBC 806r 2014


text: UCSDMI

text: public

text: Well H9 5361

text: TRUE

text: urban biome

text: research facility

text: sebum

text: human-skin

text: USA:CO:Boulder

text: TRUE

text: Homo sapiens

text: human

characteristic: latitude

characteristic: longitude

text: human skin metagenome

text: UCSDMI

text: FALSE

characteristic: project

text: TRUE

text: skin

text: human skin metagenome

text: Primer test 515fBC 806r 2014


text: UCSDMI

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Well C10 5570

text: TRUE

text: urban biome

text: research facility

text: sebum

text: human-skin

text: USA:CO:Boulder

text: TRUE

text: Homo sapiens

text: human

text: human skin metagenome

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: skin

text: human skin metagenome

text: Primer test 515fBC 806r 2014


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

text: Well A11 5571

text: TRUE

text: urban biome

text: research facility

text: feces

text: human-gut

text: USA:CO:Boulder

text: TRUE

text: Homo sapiens

text: human

text: human gut metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: stool

text: human gut metagenome

text: Primer test 515fBC 806r 2014

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

characteristic: Submitter Id

text: Well F1 AG10

text: TRUE

text: urban biome

text: research facility

text: dust

text: built environment

text: USA:CO:Boulder

text: TRUE

text: Not applicable

text: Not applicable

text: Not applicable

text: dust metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: dust

text: dust metagenome

text: Primer test 515fBC 806r 2014


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Well F3 AG27

characteristic: description

text: TRUE

text: urban biome

text: research facility

text: dust

text: built environment

text: USA:CO:Boulder

text: TRUE

text: Not applicable

text: Not applicable

text: Not applicable

text: dust metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: dust

text: dust metagenome

text: Primer test 515fBC 806r 2014


text: UCSDMI

characteristic: INSDC last update

text: public

text: Well G4 AG3.ls

text: TRUE

characteristic: elevation

text: urban biome

text: research facility

text: dust

text: built environment

text: USA:CO:Boulder

text: TRUE

text: Not applicable

characteristic: host scientific name

text: Not applicable

text: Not applicable

text: dust metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: dust

text: dust metagenome

text: Primer test 515fBC 806r 2014


text: UCSDMI

text: public

text: Well A5 AG31

text: TRUE

text: urban biome

text: research facility

text: dust

text: built environment

text: USA:CO:Boulder

text: TRUE

text: Not applicable

text: Not applicable

text: Not applicable

characteristic: latitude

characteristic: longitude

text: dust metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

text: dust

text: dust metagenome

text: Primer test 515fBC 806r 2014


text: UCSDMI

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Well D1 AG34

text: TRUE

text: urban biome

text: research facility

text: dust

text: built environment

text: USA:CO:Boulder

text: TRUE

text: Not applicable

text: Not applicable

text: Not applicable

text: dust metagenome

text: UCSDMI

text: FALSE

characteristic: project

text: TRUE

text: dust

text: dust metagenome

text: Primer test 515fBC 806r 2014


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

text: Well D3 AG35

text: TRUE

text: urban biome

text: research facility

text: dust

text: built environment

text: USA:CO:Boulder

text: TRUE

text: Not applicable

text: Not applicable

text: Not applicable

text: dust metagenome

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: dust

text: dust metagenome

text: Primer test 515fBC 806r 2014


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: Well AG45 old plate

text: TRUE

text: urban biome

text: research facility

text: dust

text: built environment

text: USA:CO:Boulder

text: TRUE

text: Not applicable

text: Not applicable

text: Not applicable

text: dust metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: dust

text: dust metagenome

text: Primer test 515fBC 806r 2014

characteristic: title


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Well E1 AG7

text: TRUE

text: urban biome

text: research facility

text: dust

text: built environment

text: USA:CO:Boulder

text: TRUE

text: Not applicable

text: Not applicable

text: Not applicable

text: dust metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: dust

text: dust metagenome

text: Primer test 515fBC 806r 2014


text: UCSDMI

characteristic: INSDC last update

text: public

text: Well G3 AG72

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

text: research facility

text: dust

text: built environment

text: USA:CO:Boulder

text: TRUE

text: Not applicable

text: Not applicable

text: Not applicable

text: dust metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: dust

text: dust metagenome

text: Primer test 515fBC 806r 2014


text: UCSDMI

text: public

text: Well BVP6 old plate

text: TRUE

text: urban biome

text: research facility

text: dust

text: built environment

text: USA:CO:Boulder

text: TRUE

text: Not applicable

characteristic: host scientific name

text: Not applicable

text: Not applicable

characteristic: latitude

characteristic: longitude

text: dust metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: dust

text: dust metagenome

text: Primer test 515fBC 806r 2014


text: UCSDMI

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Well E12 Balaton.2.1.11

text: TRUE

text: urban biome

text: research facility

text: organic material

text: microbial mat/biofilm

text: USA:CO:Boulder

text: TRUE

text: Not applicable

text: Not applicable

text: Not applicable

text: metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

text: culture

text: metagenome

text: Primer test 515fBC 806r 2014


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

text: Well F12 Blank.F12 old plate

text: TRUE

text: urban biome

text: research facility

text: sterile water

text: misc environment

text: USA:CO:Boulder

text: TRUE

text: Not applicable

text: Not applicable

text: Not applicable

text: metagenome

text: UCSDMI

text: FALSE

text: NTCblanks

characteristic: project

text: TRUE

text: control

text: metagenome

text: Primer test 515fBC 806r 2014


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: Well G12 Blank.G12

text: TRUE

text: urban biome

text: research facility

text: sterile water

text: misc environment

text: USA:CO:Boulder

text: TRUE

text: Not applicable

text: Not applicable

text: Not applicable

text: metagenome

text: UCSDMI

text: FALSE

text: NTCblanks

text: TRUE

characteristic: public

text: control

text: metagenome

text: Primer test 515fBC 806r 2014


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Well H12 Blank.H12

text: TRUE

text: urban biome

text: research facility

text: sterile water

text: misc environment

text: USA:CO:Boulder

text: TRUE

text: Not applicable

text: Not applicable

text: Not applicable

text: metagenome

text: UCSDMI

text: FALSE

text: NTCblanks

text: TRUE

text: control

text: metagenome

text: Primer test 515fBC 806r 2014

characteristic: title


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Well D12 Cerise.2.1.11

characteristic: description

text: TRUE

text: urban biome

text: research facility

text: organic material

text: microbial mat/biofilm

text: USA:CO:Boulder

text: TRUE

text: Not applicable

text: Not applicable

text: Not applicable

text: metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: culture

text: metagenome

text: Primer test 515fBC 806r 2014


text: UCSDMI

text: public

text: Well F6 D.soil.T0.1

text: TRUE

characteristic: elevation

text: urban biome

text: research facility

text: soil

text: soil

text: USA:CO:Boulder

text: TRUE

text: Not applicable

characteristic: host scientific name

text: Not applicable

text: Not applicable

characteristic: latitude

text: soil metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: soil

text: soil metagenome

text: Primer test 515fBC 806r 2014


text: UCSDMI

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Well G6 D.soil.T0.2

text: TRUE

text: urban biome

text: research facility

text: soil

text: soil

text: USA:CO:Boulder

text: TRUE

text: Not applicable

text: Not applicable

text: Not applicable

characteristic: longitude

text: soil metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: soil

text: soil metagenome

text: Primer test 515fBC 806r 2014


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

text: Well H6 D.soil.T0.3

text: TRUE

text: urban biome

text: research facility

text: soil

text: soil

text: USA:CO:Boulder

text: TRUE

text: Not applicable

text: Not applicable

text: Not applicable

text: soil metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

text: soil

text: soil metagenome

text: Primer test 515fBC 806r 2014


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: Well A7 D.soil.T0.4

text: TRUE

text: urban biome

text: research facility

text: soil

text: soil

text: USA:CO:Boulder

text: TRUE

text: Not applicable

text: Not applicable

text: Not applicable

text: soil metagenome

text: UCSDMI

text: FALSE

characteristic: project

text: TRUE

text: soil

text: soil metagenome

text: Primer test 515fBC 806r 2014


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Well D.soil.T0.5 old plate

text: TRUE

text: urban biome

text: research facility

text: soil

text: soil

text: USA:CO:Boulder

text: TRUE

text: Not applicable

text: Not applicable

text: Not applicable

text: soil metagenome

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: soil

text: soil metagenome

text: Primer test 515fBC 806r 2014


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Well E2 DM105

text: TRUE

text: urban biome

text: research facility

text: dust

text: built environment

text: USA:CO:Boulder

text: TRUE

text: Not applicable

text: Not applicable

text: Not applicable

text: dust metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: dust

text: dust metagenome

text: Primer test 515fBC 806r 2014

characteristic: title


text: UCSDMI

text: public

text: Well A4 DM111

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

text: research facility

text: dust

text: built environment

text: USA:CO:Boulder

text: TRUE

text: Not applicable

characteristic: host scientific name

text: Not applicable

text: Not applicable

text: dust metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: dust

text: dust metagenome

text: Primer test 515fBC 806r 2014


text: UCSDMI

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Well E4 DM117

text: TRUE

text: urban biome

text: research facility

text: dust

text: built environment

text: USA:CO:Boulder

text: TRUE

text: Not applicable

text: Not applicable

text: Not applicable

characteristic: latitude

text: dust metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: dust

text: dust metagenome

text: Primer test 515fBC 806r 2014


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

text: Well G2 DM145

text: TRUE

text: urban biome

text: research facility

text: dust

text: built environment

text: USA:CO:Boulder

text: TRUE

text: Not applicable

text: Not applicable

text: Not applicable

characteristic: longitude

text: dust metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: dust

text: dust metagenome

text: Primer test 515fBC 806r 2014


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: Well H3 DM147

text: TRUE

text: urban biome

text: research facility

text: dust

text: built environment

text: USA:CO:Boulder

text: TRUE

text: Not applicable

text: Not applicable

text: Not applicable

text: dust metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

text: dust

text: dust metagenome

text: Primer test 515fBC 806r 2014


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Well B1 DM150

text: TRUE

text: urban biome

text: research facility

text: dust

text: built environment

text: USA:CO:Boulder

text: TRUE

text: Not applicable

text: Not applicable

text: Not applicable

text: dust metagenome

text: UCSDMI

text: FALSE

characteristic: project

text: TRUE

text: dust

text: dust metagenome

text: Primer test 515fBC 806r 2014


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Well A3 DM152

text: TRUE

text: urban biome

text: research facility

text: dust

text: built environment

text: USA:CO:Boulder

text: TRUE

text: Not applicable

text: Not applicable

text: Not applicable

text: dust metagenome

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: dust

text: dust metagenome

text: Primer test 515fBC 806r 2014


text: UCSDMI

text: public

text: Well H2 DM186

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

text: research facility

text: dust

text: built environment

text: USA:CO:Boulder

text: TRUE

text: Not applicable

text: Not applicable

text: Not applicable

text: dust metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: dust

text: dust metagenome

characteristic: title

text: Primer test 515fBC 806r 2014


text: UCSDMI

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Well C3 DM187

text: TRUE

text: urban biome

text: research facility

text: dust

text: built environment

text: USA:CO:Boulder

text: TRUE

text: Not applicable

characteristic: host scientific name

text: Not applicable

text: Not applicable

text: dust metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: dust

text: dust metagenome

text: Primer test 515fBC 806r 2014


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

text: Well C1 DM3

text: TRUE

text: urban biome

text: research facility

text: dust

text: built environment

text: USA:CO:Boulder

text: TRUE

text: Not applicable

text: Not applicable

text: Not applicable

characteristic: latitude

text: dust metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: dust

text: dust metagenome

text: Primer test 515fBC 806r 2014


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: Well A1 DM51

text: TRUE

text: urban biome

text: research facility

text: dust

text: built environment

text: USA:CO:Boulder

text: TRUE

text: Not applicable

text: Not applicable

text: Not applicable

characteristic: longitude

text: dust metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: dust

text: dust metagenome

text: Primer test 515fBC 806r 2014


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Well DM73 old plate

text: TRUE

text: urban biome

text: research facility

text: dust

text: built environment

text: USA:CO:Boulder

text: TRUE

text: Not applicable

text: Not applicable

text: Not applicable

text: dust metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

text: dust

text: dust metagenome

text: Primer test 515fBC 806r 2014


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Well B2 DM74

text: TRUE

text: urban biome

text: research facility

text: dust

text: built environment

text: USA:CO:Boulder

text: TRUE

text: Not applicable

text: Not applicable

text: Not applicable

text: dust metagenome

text: UCSDMI

text: FALSE

characteristic: project

text: TRUE

text: dust

text: dust metagenome

text: Primer test 515fBC 806r 2014


text: UCSDMI

text: public

text: Well B4 DM95

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

text: research facility

text: dust

text: built environment

text: USA:CO:Boulder

text: TRUE

text: Not applicable

text: Not applicable

text: Not applicable

text: dust metagenome

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: dust

text: dust metagenome

text: Primer test 515fBC 806r 2014