characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Leibniz Institute for Freshwater Ecology and Inland Fisheries

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: TrueSeq adapters

characteristic: adapters

characteristic: ammonium

characteristic: carbon dioxide µm/l

characteristic: chloride

characteristic: collection date

text: universal SSU primers

characteristic: description

characteristic: dissolved inorganic phosphorus

characteristic: dissolved oxygen in mg/l

text: permafrost

characteristic: environment (biome)

text: pond

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: mimarks-survey

text: MoBio Power Soil Kit

text: pond metagenome

characteristic: organism

text: filtration

text: pond metagenome

text: Illumina MiSeq

characteristic: title

text: water


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Leibniz Institute for Freshwater Ecology and Inland Fisheries

characteristic: Submitter Id

text: TrueSeq adapters

unit: µmol/L

unit: mg/L

text: universal SSU primers

unit: µg/L

text: permafrost

text: pond

text: water

text: Canada

unit: m

unit: DD

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

characteristic: iron µm/l

characteristic: methane µm/l

characteristic: nitrate

text: MoBio Power Soil Kit

characteristic: nucleic acid extraction

text: pond metagenome

text: 926F:ACAAACTYRAAGRAATWGRCGG;1392R:CAGACGGGCGGTGWGTRC

characteristic: pcr primers

characteristic: ph

characteristic: project name

text: filtration

characteristic: sample material processing

text: pond metagenome

text: Illumina MiSeq

characteristic: sequencing method

characteristic: sulfate

characteristic: suva

unit: ºC

characteristic: temperature

text: SAS 2B

characteristic: total organic carbon mg/l

text: water

characteristic: water environmental package

type: has member


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: TrueSeq adapters

characteristic: adapters

characteristic: ammonium

characteristic: carbon dioxide µm/l

characteristic: chloride

characteristic: collection date

text: universal SSU primers

characteristic: description

characteristic: dissolved inorganic phosphorus

characteristic: dissolved oxygen in mg/l

text: permafrost

characteristic: environment (biome)

text: pond

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: mimarks-survey

text: MoBio Power Soil Kit

text: pond metagenome

characteristic: organism

text: filtration

text: pond metagenome

text: Illumina MiSeq

text: SAS 2C

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: TrueSeq adapters

text: universal SSU primers

text: permafrost

text: pond

text: water

text: Canada

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

characteristic: iron µm/l

characteristic: methane µm/l

characteristic: nitrate

text: MoBio Power Soil Kit

characteristic: nucleic acid extraction

text: pond metagenome

characteristic: pcr primers

characteristic: ph

characteristic: project name

text: filtration

characteristic: sample material processing

text: pond metagenome

text: Illumina MiSeq

characteristic: sequencing method

characteristic: sulfate

characteristic: suva

characteristic: temperature

text: SAS 2D

characteristic: total organic carbon mg/l

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: TrueSeq adapters

characteristic: adapters

characteristic: ammonium

characteristic: carbon dioxide µm/l

characteristic: chloride

characteristic: collection date

text: universal SSU primers

characteristic: description

characteristic: dissolved inorganic phosphorus

characteristic: dissolved oxygen in mg/l

text: permafrost

characteristic: environment (biome)

text: pond

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: mimarks-survey

text: MoBio Power Soil Kit

text: pond metagenome

characteristic: organism

text: filtration

text: pond metagenome

text: Illumina MiSeq

text: SAS 2A

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: TrueSeq adapters

text: universal SSU primers

text: permafrost

text: pond

text: water

text: Canada

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

characteristic: iron µm/l

characteristic: methane µm/l

characteristic: nitrate

text: MoBio Power Soil Kit

characteristic: nucleic acid extraction

text: pond metagenome

characteristic: pcr primers

characteristic: ph

characteristic: project name

text: filtration

characteristic: sample material processing

text: pond metagenome

text: Illumina MiSeq

characteristic: sequencing method

characteristic: sulfate

characteristic: suva

characteristic: temperature

text: J1 (B4)

characteristic: total organic carbon mg/l

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: TrueSeq adapters

characteristic: adapters

characteristic: ammonium

characteristic: carbon dioxide µm/l

characteristic: chloride

characteristic: collection date

text: fungal ITS2 primers

characteristic: description

characteristic: dissolved inorganic phosphorus

characteristic: dissolved oxygen in mg/l

text: permafrost

characteristic: environment (biome)

text: pond

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: mimarks-survey

text: MoBio Power Soil Kit

text: pond metagenome

characteristic: organism

text: ITS3mix2:AACCAWCGATGAAGAACGCAG;ITS4cwmix:AATCCTCCGCTTAYTRATATGC

text: filtration

text: pond metagenome

text: Illumina MiSeq

text: SAS 2A

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: TrueSeq adapters

text: fungal ITS2 primers

text: permafrost

text: pond

text: water

text: Canada

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

characteristic: iron µm/l

characteristic: methane µm/l

characteristic: nitrate

text: MoBio Power Soil Kit

characteristic: nucleic acid extraction

text: pond metagenome

characteristic: pcr primers

characteristic: ph

characteristic: project name

text: filtration

characteristic: sample material processing

text: pond metagenome

text: Illumina MiSeq

characteristic: sequencing method

characteristic: sulfate

characteristic: suva

characteristic: temperature

characteristic: total organic carbon mg/l

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: TrueSeq adapters

characteristic: adapters

characteristic: ammonium

characteristic: carbon dioxide µm/l

characteristic: chloride

characteristic: collection date

text: fungal ITS2 primers

characteristic: description

characteristic: dissolved inorganic phosphorus

characteristic: dissolved oxygen in mg/l

text: permafrost

characteristic: environment (biome)

text: pond

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: mimarks-survey

text: MoBio Power Soil Kit

text: pond metagenome

characteristic: organism

text: filtration

text: pond metagenome

text: Illumina MiSeq

text: SAS 2B

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: TrueSeq adapters

text: fungal ITS2 primers

text: permafrost

text: pond

text: water

text: Canada

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

characteristic: iron µm/l

characteristic: methane µm/l

characteristic: nitrate

text: MoBio Power Soil Kit

characteristic: nucleic acid extraction

text: pond metagenome

characteristic: pcr primers

characteristic: ph

characteristic: project name

text: filtration

characteristic: sample material processing

text: pond metagenome

text: Illumina MiSeq

characteristic: sequencing method

characteristic: sulfate

characteristic: suva

characteristic: temperature

text: SAS 2C

characteristic: total organic carbon mg/l

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: TrueSeq adapters

characteristic: adapters

characteristic: ammonium

characteristic: carbon dioxide µm/l

characteristic: chloride

characteristic: collection date

text: fungal ITS2 primers

characteristic: description

characteristic: dissolved inorganic phosphorus

characteristic: dissolved oxygen in mg/l

text: permafrost

characteristic: environment (biome)

text: pond

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: mimarks-survey

text: MoBio Power Soil Kit

text: pond metagenome

characteristic: organism

text: filtration

text: pond metagenome

text: Illumina MiSeq

text: SAS 2D

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: TrueSeq adapters

text: fungal ITS2 primers

text: permafrost

text: pond

text: water

text: Canada

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

characteristic: iron µm/l

characteristic: methane µm/l

characteristic: nitrate

text: MoBio Power Soil Kit

characteristic: nucleic acid extraction

text: pond metagenome

characteristic: pcr primers

characteristic: ph

characteristic: project name

text: filtration

characteristic: sample material processing

text: pond metagenome

text: Illumina MiSeq

characteristic: sequencing method

characteristic: sulfate

characteristic: suva

characteristic: temperature

text: J1 (B4)

characteristic: total organic carbon mg/l

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: TrueSeq adapters

characteristic: adapters

characteristic: ammonium

characteristic: carbon dioxide µm/l

characteristic: chloride

characteristic: collection date

text: bacterial 16S primers

characteristic: description

characteristic: dissolved inorganic phosphorus

characteristic: dissolved oxygen in mg/l

text: permafrost

characteristic: environment (biome)

text: pond

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: mimarks-survey

text: MoBio Power Soil Kit

text: pond metagenome

characteristic: organism

text: 341F:CCTACGGGNGGCWGCAG;805R:GACTACHVGGGTATCTAATCC

text: filtration

text: pond metagenome

text: Illumina MiSeq

text: SAS 2A

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: TrueSeq adapters

text: bacterial 16S primers

text: permafrost

text: pond

text: water

text: Canada

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

characteristic: iron µm/l

characteristic: methane µm/l

characteristic: nitrate

text: MoBio Power Soil Kit

characteristic: nucleic acid extraction

text: pond metagenome

characteristic: pcr primers

characteristic: ph

characteristic: project name

text: filtration

characteristic: sample material processing

text: pond metagenome

text: Illumina MiSeq

characteristic: sequencing method

characteristic: sulfate

characteristic: suva

characteristic: temperature

characteristic: total organic carbon mg/l

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: TrueSeq adapters

characteristic: adapters

characteristic: ammonium

characteristic: carbon dioxide µm/l

characteristic: chloride

characteristic: collection date

text: bacterial 16S primers

characteristic: description

characteristic: dissolved inorganic phosphorus

characteristic: dissolved oxygen in mg/l

text: permafrost

characteristic: environment (biome)

text: pond

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: mimarks-survey

text: MoBio Power Soil Kit

text: pond metagenome

characteristic: organism

text: filtration

text: pond metagenome

text: Illumina MiSeq

text: SAS 2B

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: TrueSeq adapters

text: bacterial 16S primers

text: permafrost

text: pond

text: water

text: Canada

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

characteristic: iron µm/l

characteristic: methane µm/l

characteristic: nitrate

text: MoBio Power Soil Kit

characteristic: nucleic acid extraction

text: pond metagenome

characteristic: pcr primers

characteristic: ph

characteristic: project name

text: filtration

characteristic: sample material processing

text: pond metagenome

text: Illumina MiSeq

characteristic: sequencing method

characteristic: sulfate

characteristic: suva

characteristic: temperature

text: SAS 2C

characteristic: total organic carbon mg/l

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF LIVERPOOL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:UNIVERSITY OF LIVERPOOL

characteristic: Submitter Id

characteristic: collection date

text: Human

characteristic: common name

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human gut

characteristic: environment (feature)

text: stool

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: stool

characteristic: host body product

text: B

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: mimarks-survey

text: Homo sapiens

characteristic: organism

text: Effect of diet on human gut microbiota

text: Homo sapiens

text: Illumina MiSeq paired-end 250bp

text: W

characteristic: special diet

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: TrueSeq adapters

characteristic: adapters

characteristic: ammonium

characteristic: carbon dioxide µm/l

characteristic: chloride

text: bacterial 16S primers

characteristic: dissolved inorganic phosphorus

characteristic: dissolved oxygen in mg/l

text: permafrost

text: pond

text: water

text: Canada

characteristic: geographic location (depth)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

characteristic: iron µm/l

characteristic: methane µm/l

characteristic: nitrate

text: MoBio Power Soil Kit

characteristic: nucleic acid extraction

text: pond metagenome

characteristic: pcr primers

characteristic: ph

characteristic: project name

text: filtration

characteristic: sample material processing

text: pond metagenome

text: Illumina MiSeq

characteristic: sequencing method

characteristic: sulfate

characteristic: suva

characteristic: temperature

text: SAS 2D

characteristic: total organic carbon mg/l

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: TrueSeq adapters

characteristic: adapters

characteristic: ammonium

characteristic: carbon dioxide µm/l

characteristic: chloride

characteristic: collection date

text: bacterial 16S primers

characteristic: description

characteristic: dissolved inorganic phosphorus

characteristic: dissolved oxygen in mg/l

text: permafrost

characteristic: environment (biome)

text: pond

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: mimarks-survey

text: MoBio Power Soil Kit

text: pond metagenome

characteristic: organism

text: filtration

text: pond metagenome

text: Illumina MiSeq

text: J1 (B4)

characteristic: title

text: water


Spalax Liver Hypoxia 1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MAINZ

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Spalax Liver Hypoxia 1

characteristic: Submitter Id

text: Upper Galilee mountains blind mole rat

characteristic: common name

text: Nannospalax galili

text: Nannospalax galili

text: 6% O2 for 6h


Spalax Liver Hypoxia 2

text: MAINZ

text: public

text: Spalax Liver Hypoxia 2

text: Upper Galilee mountains blind mole rat

text: Nannospalax galili

text: Nannospalax galili

text: 6% O2 for 6h


Spalax Liver Hypoxia 3

text: MAINZ

text: public

text: Spalax Liver Hypoxia 3

text: Upper Galilee mountains blind mole rat

text: Nannospalax galili

text: Nannospalax galili

text: 6% O2 for 6h


Spalax Liver Normoxia 1

text: MAINZ

text: public

text: Spalax Liver Normoxia 1

text: Upper Galilee mountains blind mole rat

text: Nannospalax galili

text: Nannospalax galili

text: 21% O2 for 6h


Spalax Liver Normoxia 2

text: MAINZ

text: public

text: Spalax Liver Normoxia 2

text: Upper Galilee mountains blind mole rat

text: Nannospalax galili

text: Nannospalax galili

text: 21% O2 for 6h


Spalax Liver Normoxia 3

text: MAINZ

text: public

text: Spalax Liver Normoxia 3

text: Upper Galilee mountains blind mole rat

text: Nannospalax galili

text: Nannospalax galili

text: 21% O2 for 6h


Rat Liver Hypoxia 1

text: MAINZ

text: public

text: Rat Liver Hypoxia 1

text: Norway rat

text: Rattus norvegicus

text: Rattus norvegicus

text: 6% O2 for 6h


Rat Liver Hypoxia 2

text: MAINZ

text: public

text: Rat Liver Hypoxia 2

text: Norway rat

text: Rattus norvegicus

text: Rattus norvegicus

text: 6% O2 for 6h


Rat Liver Hypoxia 3

text: MAINZ

text: public

text: Rat Liver Hypoxia 3

text: Norway rat

text: Rattus norvegicus

text: Rattus norvegicus

text: 6% O2 for 6h


Rat Liver Normoxia 1

text: MAINZ

text: public

text: Rat Liver Normoxia 1

text: Norway rat

text: Rattus norvegicus

text: Rattus norvegicus

text: 21% O2 for 6h


Rat Liver Normoxia 2

text: MAINZ

text: public

text: Rat Liver Normoxia 2

text: Norway rat

text: Rattus norvegicus

text: Rattus norvegicus

text: 21% O2 for 6h


Rat Liver Normoxia 3

text: MAINZ

text: public

text: Rat Liver Normoxia 3

text: Norway rat

text: Rattus norvegicus

text: Rattus norvegicus

text: 21% O2 for 6h


text: FRCC PCM

text: public

tag: Namespace:FRCC PCM

text: Enterococcus faecium sequencing

characteristic: description

text: Enterococcus faecium

text: Enterococcus faecium

text: Enterococcus faecium


text: public

tag: Namespace:VIB, Vesalius Research Center, Belgium KUL, Department of Oncology; Belgium

text: not available

characteristic: age

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: house mouse

text: Protocols: 5T33 inoculated mice take approximately 3 weeks to develop MM while 5T2 inoculated mice take approximately 3-4 months. At that point, bone marrow was isolated by flushing the long bones. Briefly, bone marrow was flushed out, filtered using a nylon gause and subjected to red blood cell lysis. Samples were washed by PBS supplemented with 1% BSA and 0.01% azide. Next, cells were stained with anti-idiotype antibodies (in-house production) and anti-CD11b-FITC (ImTec Diagnostics, Antwerp, Belgium) for 30min at 4°C. Following washing with PBS/BSA/azide, the samples were incubated with the secondary antibody rat anti-muis IgG1-APC (BD Bioscience, Erembodegem, Belgium) for 30min at 4°C. After the last washing step, samples were dissolved in PBS/BSA azide supplemented with 2µl 7AAD (BD Bioscience) per million cells. Tumor cells were FACS sorted. To obtain >95% pure tumor populations, we gated out CD11b and 7AAD-positive cells followed by positive selection of anti-idiotype positive cells. C57BL/KaLwRij and C57BL/6 mice were purchased from Envigo (Horst, Nederland). Mice were housed according to the approved conditions by the Ethical Committee for Animal Experiments of the Vrije Universiteit Brussel (license no. LA1230281). 5T33 and 5T2 models were maintained as previously described (35). The 5TGM1 cell line was cultured at 37°C and 5% CO2 in RPMI-1640 medium (Lonza, Basel, Switserland) supplemented with 100U/ml penicillin/streptomycin, 1mM Na-pyruvate, 2mM glutamine (Gibco, Eggenstein, Germany) and 10% fetal calf serum (FCS, Hyclone, UT, USA). DNA from 5TGM1 cells, sorted 5T33 and 5T2, and tails was isolated using the Wizard Genomic DNA purification kit (Promega, Madison, WI, USA). DNA was dissolved in 80µl PBS + 4µl RNAse A and incubated for 10min at 37°C. After adding proteinase K and incubation for 10min at 56°C, DNA was purified using the Qiamp DNA mini kit according to manufactures instructions. (Qiagen) DNA was eluted in 100µl 10mM Tris and stored at -80°C for further processing. Whole-genome DNA libraries of 2 murine models, 1 cell line and 4 tails were prepared with Illumina’s TruSeq DNA sample preparation kit V2 according to the manufacturer’s instructions. Capture was done using the Nimblegen SeqCap EZ Developer Library kit (110624_MM9_Exome L2R_D02_EZ_HX1_9999042611).

text: multiple myeloma

characteristic: disease

text: wild type genotype

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: bone marrow (tumor)

characteristic: organism part

text: Mus musculus

text: female

characteristic: sex

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VIB, Vesalius Research Center, Belgium KUL, Department of Oncology; Belgium

text: public

text: not available

text: ArrayExpress

text: house mouse

text: normal

text: wild type genotype

text: Mus musculus

characteristic: organism

text: Mus musculus

text: tail

text: Mus musculus

text: not available

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

unit: week

text: ArrayExpress

text: house mouse

text: multiple myeloma

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: bone marrow (tumor)

text: Mus musculus

text: female


text: public

unit: month

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

characteristic: description

text: multiple myeloma

characteristic: disease

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: bone marrow (tumor)

text: Mus musculus

text: male


characteristic: ENA-CHECKLIST

text: NIOZ

text: public

characteristic: collection date

text: Analysis of three different stations of different salinity in the hypersaline Lake Meyghan, Iran

text: hypersaline water

characteristic: environment (biome)

text: hypersaline lake

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: Iran

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: metagenome

text: Lake Meyghan

characteristic: project name

text: metagenome

text: Illumina HiSeq4000 - PE100

characteristic: sequencing method

text: Lake Meyghan metagenomics

text: water

characteristic: water environmental package


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF LIVERPOOL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Human

characteristic: common name

text: human-associated habitat

text: human gut

text: stool

text: United Kingdom

text: stool

characteristic: host body product

text: B

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: mimarks-survey

text: Homo sapiens

characteristic: organism

text: Effect of diet on human gut microbiota

text: Homo sapiens

text: Illumina MiSeq paired-end 250bp

text: RS

characteristic: special diet

characteristic: title


characteristic: ENA-CHECKLIST

text: UCSDMI

text: public

text: 4/11/16 10:45

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: anaerobic bioreactor

characteristic: env feature

text: wastewater/sludge

characteristic: env package

text: anaerobic sludge

text: USA:NY:Ithaca

characteristic: geo loc name

text: TRUE

text: TRUE

characteristic: latitude

characteristic: longitude

text: bioreactor metagenome

text: OLR 15 g COD/L/d

characteristic: phase

text: Ithaca

text: Cornell

text: TRUE

text: completed

characteristic: sample size

text: anaerobic reactor biomass

characteristic: sample type

text: sequenced (16S)

text: bioreactor metagenome

text: chain elongation with pure culture of C. kluyveri


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 04/25/2016 11:30:00

text: TRUE

text: urban biome

text: anaerobic bioreactor

text: wastewater/sludge

text: anaerobic sludge

text: USA:NY:Ithaca

text: TRUE

text: TRUE

characteristic: host subject id

text: bioreactor metagenome

text: OLR 15 g COD/L/d

text: Ithaca

text: Cornell

text: TRUE

text: completed

text: anaerobic reactor biomass

text: sequenced (16S)

text: bioreactor metagenome


characteristic: ENA-CHECKLIST

text: public

tag: Namespace:Centre de Biologie pour la Gestion des Populations (CBGP - UMR1062)

text: Armelle Coeur D'Acier

characteristic: collected by

characteristic: collection date

text: USA:Minnesota, Lake George

characteristic: geographic location (region and locality)

text: Cinara strobi

characteristic: host scientific name

characteristic: isolate

text: host's whole body

characteristic: isolation source

text: 47.20169400 N 94.99250500 W

characteristic: lat lon

text: Buchnera aphidicola (Cinara strobi)

characteristic: organism

text: Buchnera aphidicola (Cinara strobi)

characteristic: specimen voucher

text: BCistrobi

characteristic: strain

text: Buchnera, obligate endosymbiont of the aphid Cinara strobi species voucher 3249

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Centre de Biologie pour la Gestion des Populations (CBGP - UMR1062)

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Armelle Coeur D'Acier

text: USA:Minnesota, Lake George

text: Cinara strobi

text: host's whole body

text: 47.20169400 N 94.99250500 W

text: Candidatus Sodalis sp. SoCistrobi

text: Candidatus Sodalis sp. SoCistrobi

text: SoCistrobi

text: Candidatus Sodalis sp. strain SoCistrobi isolate 3249, symbiont of the aphid Cinara strobi species voucher 3249


characteristic: ENA-CHECKLIST

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Armelle Coeur D'Acier; Emmanuelle Jousselin

characteristic: collected by

text: USA:Oregon, Wallowa County

text: Cinara pseudotaxifoliae

text: host's whole body

text: 45.33507100 N 117.07776900 W

text: Candidatus Erwinia sp. ErCipseudotaxifoliae

text: ErCipseudotaxifoliae

text: Candidatus Erwinia sp. strain ErCipseudotaxifoliae isolate 3056, obligate endosymbiont of the aphid Cinara pseudotaxifoliae species voucher 3056


text: BIHP, INSTITUT PASTEUR

text: public

tag: Namespace:BIHP, INSTITUT PASTEUR

text: Plasmodium falciparum 3D7

text: Plasmodium falciparum 3D7

text: Histone H3 clipping


text: VTT

text: public

characteristic: collection date

text: uncultured archaeon

characteristic: common name

text: anoxic groundwater

characteristic: description

text: groundwater

characteristic: environment (biome)

text: anoxic groundwater

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: water

characteristic: environmental package

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: miscellaneous natural or artificial environment

characteristic: miscellaneous environmental package

text: TGTGTACGC

characteristic: multiplex identifiers

text: uncultured archaeon

text: GYGCASCAGKCGMGAAW,GGACTACVSGGGTATCTAAT

characteristic: pcr primers

text: OutoActive

characteristic: project name

text: uncultured archaeon

text: Ion Torrent

characteristic: sequencing method

text: Archaeal 16S rRNA gene

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VTT

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: uncultured archaeon

characteristic: common name

text: anoxic groundwater

text: groundwater

text: anoxic groundwater

text: water

text: water

text: Finland

text: mimarks-survey

text: CTCGCACTG

text: uncultured archaeon

characteristic: organism

text: GYGCASCAGKCGMGAAW,GGACTACVSGGGTATCTAAT

text: OutoActive

text: uncultured archaeon

text: Ion Torrent

text: Archaeal 16S rRNA gene

characteristic: title


text: VTT

text: public

text: uncultured archaeon

text: anoxic groundwater

characteristic: description

text: groundwater

characteristic: environment (biome)

text: anoxic groundwater

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: water

characteristic: environmental package

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

characteristic: miscellaneous environmental package

text: ACACACGCG

characteristic: multiplex identifiers

text: uncultured archaeon

text: GYGCASCAGKCGMGAAW,GGACTACVSGGGTATCTAAT

characteristic: pcr primers

text: OutoActive

characteristic: project name

text: uncultured archaeon

text: Ion Torrent

characteristic: sequencing method

text: Archaeal 16S rRNA gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VTT

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: uncultured archaeon

characteristic: common name

text: anoxic groundwater

text: groundwater

text: anoxic groundwater

text: water

text: water

text: Finland

text: mimarks-survey

text: TGTGACATG

text: uncultured archaeon

text: GYGCASCAGKCGMGAAW,GGACTACVSGGGTATCTAAT

text: OutoActive

text: uncultured archaeon

text: Ion Torrent

text: Archaeal 16S rRNA gene

characteristic: target gene

characteristic: target subfragment


text: VTT

text: public

text: uncultured archaeon

text: anoxic groundwater

characteristic: description

text: groundwater

characteristic: environment (biome)

text: anoxic groundwater

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: water

characteristic: environmental package

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

characteristic: miscellaneous environmental package

text: TCTCTCTCT

characteristic: multiplex identifiers

text: uncultured archaeon

characteristic: organism

text: GYGCASCAGKCGMGAAW,GGACTACVSGGGTATCTAAT

characteristic: pcr primers

text: OutoActive

text: uncultured archaeon

text: Ion Torrent

text: Archaeal 16S rRNA gene

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VTT

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: uncultured archaeon

characteristic: common name

text: anoxic groundwater

text: groundwater

text: anoxic groundwater

text: water

text: water

text: Finland

text: mimarks-survey

text: CGATCTCTC

text: uncultured archaeon

text: GYGCASCAGKCGMGAAW,GGACTACVSGGGTATCTAAT

text: OutoActive

characteristic: project name

text: uncultured archaeon

text: Ion Torrent

characteristic: sequencing method

text: Archaeal 16S rRNA gene


text: VTT

text: public

text: uncultured archaeon

text: anoxic groundwater

characteristic: description

text: groundwater

characteristic: environment (biome)

text: anoxic groundwater

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: water

characteristic: environmental package

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

characteristic: miscellaneous environmental package

text: ACGACGATC

characteristic: multiplex identifiers

text: uncultured archaeon

characteristic: organism

text: GYGCASCAGKCGMGAAW,GGACTACVSGGGTATCTAAT

text: OutoActive

text: uncultured archaeon

text: Ion Torrent

text: Archaeal 16S rRNA gene

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VTT

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: uncultured archaeon

characteristic: common name

text: anoxic groundwater

text: groundwater

text: anoxic groundwater

text: water

text: water

text: Finland

text: mimarks-survey

text: TGAGTGAGT

text: uncultured archaeon

text: GYGCASCAGKCGMGAAW,GGACTACVSGGGTATCTAAT

characteristic: pcr primers

text: OutoActive

text: uncultured archaeon

text: Ion Torrent

text: Archaeal 16S rRNA gene

characteristic: title


text: VTT

text: public

text: uncultured archaeon

text: anoxic groundwater

characteristic: description

text: groundwater

characteristic: environment (biome)

text: anoxic groundwater

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: water

characteristic: environmental package

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

characteristic: miscellaneous environmental package

text: AGAGCTCGC

characteristic: multiplex identifiers

text: uncultured archaeon

characteristic: organism

text: GYGCASCAGKCGMGAAW,GGACTACVSGGGTATCTAAT

text: OutoActive

characteristic: project name

text: uncultured archaeon

text: Ion Torrent

characteristic: sequencing method

text: Archaeal 16S rRNA gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VTT

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: uncultured archaeon

characteristic: common name

text: anoxic groundwater

text: groundwater

text: anoxic groundwater

text: water

text: water

text: Finland

text: mimarks-survey

text: TGTAGCGAT

text: uncultured archaeon

text: GYGCASCAGKCGMGAAW,GGACTACVSGGGTATCTAAT

text: OutoActive

text: uncultured archaeon

text: Ion Torrent

text: Archaeal 16S rRNA gene

characteristic: target gene

characteristic: target subfragment


text: VTT

text: public

text: uncultured archaeon

text: anoxic groundwater

characteristic: description

text: groundwater

characteristic: environment (biome)

text: anoxic groundwater

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: water

characteristic: environmental package

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

characteristic: miscellaneous environmental package

text: CACTCACTC

characteristic: multiplex identifiers

text: uncultured archaeon

characteristic: organism

text: GYGCASCAGKCGMGAAW,GGACTACVSGGGTATCTAAT

characteristic: pcr primers

text: OutoActive

text: uncultured archaeon

text: Ion Torrent

text: Archaeal 16S rRNA gene

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF LIVERPOOL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Human

characteristic: common name

text: human-associated habitat

text: human gut

text: stool

text: United Kingdom

text: stool

characteristic: host body product

text: B

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: mimarks-survey

text: Homo sapiens

text: Effect of diet on human gut microbiota

characteristic: project name

text: Homo sapiens

text: Illumina MiSeq paired-end 250bp

characteristic: sequencing method

text: C

characteristic: special diet


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: VTT

text: public

text: uncultured archaeon

text: anoxic groundwater

characteristic: description

text: groundwater

characteristic: environment (biome)

text: anoxic groundwater

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: water

characteristic: environmental package

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

characteristic: miscellaneous environmental package

text: ACTCACTCG

characteristic: multiplex identifiers

text: uncultured archaeon

characteristic: organism

text: GYGCASCAGKCGMGAAW,GGACTACVSGGGTATCTAAT

characteristic: pcr primers

text: OutoActive

text: uncultured archaeon

text: Ion Torrent

text: Archaeal 16S rRNA gene

characteristic: target gene

characteristic: target subfragment

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VTT

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: uncultured archaeon

characteristic: common name

text: anoxic groundwater

text: groundwater

text: anoxic groundwater

text: water

text: water

text: Finland

text: mimarks-survey

text: AGCGAGCGT

text: uncultured archaeon

text: GYGCASCAGKCGMGAAW,GGACTACVSGGGTATCTAAT

text: OutoActive

characteristic: project name

text: uncultured archaeon

text: Ion Torrent

characteristic: sequencing method

text: Archaeal 16S rRNA gene


text: VTT

text: public

text: uncultured archaeon

text: anoxic groundwater

characteristic: description

text: groundwater

characteristic: environment (biome)

text: anoxic groundwater

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: water

characteristic: environmental package

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

characteristic: miscellaneous environmental package

text: TCTATCTAG

characteristic: multiplex identifiers

text: uncultured archaeon

characteristic: organism

text: GYGCASCAGKCGMGAAW,GGACTACVSGGGTATCTAAT

characteristic: pcr primers

text: OutoActive

text: uncultured archaeon

text: Ion Torrent

text: Archaeal 16S rRNA gene

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VTT

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: uncultured archaeon

characteristic: common name

text: anoxic groundwater

text: groundwater

text: anoxic groundwater

text: water

text: water

text: Finland

text: mimarks-survey

text: CTCTCGCAG

text: uncultured archaeon

text: GYGCASCAGKCGMGAAW,GGACTACVSGGGTATCTAAT

text: OutoActive

text: uncultured archaeon

text: Ion Torrent

text: Archaeal 16S rRNA gene

characteristic: target subfragment

characteristic: title


text: VTT

text: public

text: uncultured archaeon

text: anoxic groundwater

characteristic: description

text: groundwater

characteristic: environment (biome)

text: anoxic groundwater

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: water

characteristic: environmental package

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

characteristic: miscellaneous environmental package

text: TGTGAGAGT

characteristic: multiplex identifiers

text: uncultured archaeon

characteristic: organism

text: GYGCASCAGKCGMGAAW,GGACTACVSGGGTATCTAAT

text: OutoActive

characteristic: project name

text: uncultured archaeon

text: Ion Torrent

characteristic: sequencing method

text: Archaeal 16S rRNA gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VTT

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: uncultured archaeon

characteristic: common name

text: anoxic groundwater

text: groundwater

text: anoxic groundwater

text: water

text: water

text: Finland

text: mimarks-survey

text: AGCTCGTGT

text: uncultured archaeon

text: GYGCASCAGKCGMGAAW,GGACTACVSGGGTATCTAAT

characteristic: pcr primers

text: OutoActive

text: uncultured archaeon

text: Ion Torrent

text: Archaeal 16S rRNA gene

characteristic: target gene


text: VTT

text: public

text: uncultured bacterium

text: anoxic groundwater

characteristic: description

text: groundwater

characteristic: environment (biome)

text: anoxic groundwater

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: water

characteristic: environmental package

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

characteristic: miscellaneous environmental package

text: TAGCTGTAC

characteristic: multiplex identifiers

text: uncultured bacterium

characteristic: organism

text: CCTACGGGNGGCWGCAG,GACTACHVGGGTATCTAATCC

text: OutoActive

text: uncultured bacterium

text: Ion Torrent

text: Bacterial 16S rRNA gene

characteristic: target subfragment

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VTT

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: uncultured bacterium

characteristic: common name

text: anoxic groundwater

text: groundwater

text: anoxic groundwater

text: water

text: water

text: Finland

text: mimarks-survey

text: TACAGTGAC

text: uncultured bacterium

text: CCTACGGGNGGCWGCAG,GACTACHVGGGTATCTAATCC

text: OutoActive

characteristic: project name

text: uncultured bacterium

text: Ion Torrent

characteristic: sequencing method

text: Bacterial 16S rRNA gene


text: VTT

text: public

text: uncultured bacterium

text: anoxic groundwater

characteristic: description

text: groundwater

characteristic: environment (biome)

text: anoxic groundwater

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: water

characteristic: environmental package

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

characteristic: miscellaneous environmental package

text: TCTGACAGC

characteristic: multiplex identifiers

text: uncultured bacterium

characteristic: organism

text: CCTACGGGNGGCWGCAG,GACTACHVGGGTATCTAATCC

characteristic: pcr primers

text: OutoActive

text: uncultured bacterium

text: Ion Torrent

text: Bacterial 16S rRNA gene

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VTT

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: uncultured bacterium

characteristic: common name

text: anoxic groundwater

text: groundwater

text: anoxic groundwater

text: water

text: water

text: Finland

text: mimarks-survey

text: TCACGTCTG

text: uncultured bacterium

text: CCTACGGGNGGCWGCAG,GACTACHVGGGTATCTAATCC

text: OutoActive

text: uncultured bacterium

text: Ion Torrent

text: Bacterial 16S rRNA gene

characteristic: target subfragment

characteristic: title


text: VTT

text: public

text: uncultured bacterium

text: anoxic groundwater

characteristic: description

text: groundwater

characteristic: environment (biome)

text: anoxic groundwater

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: water

characteristic: environmental package

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

characteristic: miscellaneous environmental package

text: TAGCTAGCT

characteristic: multiplex identifiers

text: uncultured bacterium

characteristic: organism

text: CCTACGGGNGGCWGCAG,GACTACHVGGGTATCTAATCC

text: OutoActive

characteristic: project name

text: uncultured bacterium

text: Ion Torrent

characteristic: sequencing method

text: Bacterial 16S rRNA gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VTT

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: uncultured bacterium

characteristic: common name

text: anoxic groundwater

text: groundwater

text: anoxic groundwater

text: water

text: water

text: Finland

text: mimarks-survey

text: AGCTAGCTC

text: uncultured bacterium

text: CCTACGGGNGGCWGCAG,GACTACHVGGGTATCTAATCC

characteristic: pcr primers

text: OutoActive

text: uncultured bacterium

text: Ion Torrent

text: Bacterial 16S rRNA gene

characteristic: target gene


text: VTT

text: public

text: uncultured bacterium

text: anoxic groundwater

characteristic: description

text: groundwater

characteristic: environment (biome)

text: anoxic groundwater

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: water

characteristic: environmental package

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

characteristic: miscellaneous environmental package

text: CAGTCAGTC

characteristic: multiplex identifiers

text: uncultured bacterium

characteristic: organism

text: CCTACGGGNGGCWGCAG,GACTACHVGGGTATCTAATCC

text: OutoActive

text: uncultured bacterium

text: Ion Torrent

text: Bacterial 16S rRNA gene

characteristic: target subfragment

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VTT

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: uncultured bacterium

characteristic: common name

text: anoxic groundwater

text: groundwater

text: anoxic groundwater

text: water

text: water

text: Finland

text: mimarks-survey

text: ATCGCTAGT

text: uncultured bacterium

text: CCTACGGGNGGCWGCAG,GACTACHVGGGTATCTAATCC

text: OutoActive

characteristic: project name

text: uncultured bacterium

text: Ion Torrent

characteristic: sequencing method

text: Bacterial 16S rRNA gene


text: VTT

text: public

text: uncultured bacterium

text: anoxic groundwater

characteristic: description

text: groundwater

characteristic: environment (biome)

text: anoxic groundwater

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: water

characteristic: environmental package

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

characteristic: miscellaneous environmental package

text: ACGCATAGT

characteristic: multiplex identifiers

text: uncultured bacterium

characteristic: organism

text: CCTACGGGNGGCWGCAG,GACTACHVGGGTATCTAATCC

characteristic: pcr primers

text: OutoActive

text: uncultured bacterium

text: Ion Torrent

text: Bacterial 16S rRNA gene

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VTT

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: uncultured bacterium

characteristic: common name

text: anoxic groundwater

text: groundwater

text: anoxic groundwater

text: water

text: water

text: Finland

text: mimarks-survey

text: TGACTGACT

text: uncultured bacterium

text: CCTACGGGNGGCWGCAG,GACTACHVGGGTATCTAATCC

text: OutoActive

text: uncultured bacterium

text: Ion Torrent

text: Bacterial 16S rRNA gene

characteristic: target subfragment

characteristic: title


text: VTT

text: public

text: uncultured bacterium

text: anoxic groundwater

characteristic: description

text: groundwater

characteristic: environment (biome)

text: anoxic groundwater

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: water

characteristic: environmental package

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

characteristic: miscellaneous environmental package

text: CAGTCAGCG

characteristic: multiplex identifiers

text: uncultured bacterium

characteristic: organism

text: CCTACGGGNGGCWGCAG,GACTACHVGGGTATCTAATCC

text: OutoActive

characteristic: project name

text: uncultured bacterium

text: Ion Torrent

characteristic: sequencing method

text: Bacterial 16S rRNA gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VTT

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: uncultured bacterium

characteristic: common name

text: anoxic groundwater

text: groundwater

text: anoxic groundwater

text: water

text: water

text: Finland

text: mimarks-survey

text: AGACAGACT

text: uncultured bacterium

text: CCTACGGGNGGCWGCAG,GACTACHVGGGTATCTAATCC

characteristic: pcr primers

text: OutoActive

text: uncultured bacterium

text: Ion Torrent

text: Bacterial 16S rRNA gene

characteristic: target gene


text: VTT

text: public

text: uncultured bacterium

text: anoxic groundwater

characteristic: description

text: groundwater

characteristic: environment (biome)

text: anoxic groundwater

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: water

characteristic: environmental package

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

characteristic: miscellaneous environmental package

text: CGATAGATC

characteristic: multiplex identifiers

text: uncultured bacterium

characteristic: organism

text: CCTACGGGNGGCWGCAG,GACTACHVGGGTATCTAATCC

text: OutoActive

text: uncultured bacterium

text: Ion Torrent

text: Bacterial 16S rRNA gene

characteristic: target subfragment

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VTT

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: uncultured bacterium

characteristic: common name

text: anoxic groundwater

text: groundwater

text: anoxic groundwater

text: water

text: water

text: Finland

text: mimarks-survey

text: TGTCGATAG

text: uncultured bacterium

text: CCTACGGGNGGCWGCAG,GACTACHVGGGTATCTAATCC

text: OutoActive

characteristic: project name

text: uncultured bacterium

text: Ion Torrent

characteristic: sequencing method

text: Bacterial 16S rRNA gene


text: VTT

text: public

text: uncultured bacterium

text: anoxic groundwater

characteristic: description

text: groundwater

characteristic: environment (biome)

text: anoxic groundwater

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: water

characteristic: environmental package

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

characteristic: miscellaneous environmental package

text: CGAGCGAGT

characteristic: multiplex identifiers

text: uncultured bacterium

characteristic: organism

text: CCTACGGGNGGCWGCAG,GACTACHVGGGTATCTAATCC

characteristic: pcr primers

text: OutoActive

text: uncultured bacterium

text: Ion Torrent

text: Bacterial 16S rRNA gene

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VTT

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: uncultured bacterium

characteristic: common name

text: anoxic groundwater

text: groundwater

text: anoxic groundwater

text: water

text: water

text: Finland

text: mimarks-survey

text: TGTCTAGCG

text: uncultured bacterium

text: CCTACGGGNGGCWGCAG,GACTACHVGGGTATCTAATCC

text: OutoActive

text: uncultured bacterium

text: Ion Torrent

text: Bacterial 16S rRNA gene

characteristic: target subfragment

characteristic: title


text: VTT

text: public

text: uncultured bacterium

text: anoxic groundwater

characteristic: description

text: groundwater

characteristic: environment (biome)

text: anoxic groundwater

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: water

characteristic: environmental package

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

characteristic: miscellaneous environmental package

text: TGTGTGTGC

characteristic: multiplex identifiers

text: uncultured bacterium

characteristic: organism

text: CCTACGGGNGGCWGCAG,GACTACHVGGGTATCTAATCC

text: OutoActive

characteristic: project name

text: uncultured bacterium

text: Ion Torrent

characteristic: sequencing method

text: Bacterial 16S rRNA gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VTT

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: uncultured bacterium

characteristic: common name

text: anoxic groundwater

text: groundwater

text: anoxic groundwater

text: water

text: water

text: Finland

text: mimarks-survey

text: CACACGCGT

text: uncultured bacterium

text: CCTACGGGNGGCWGCAG,GACTACHVGGGTATCTAATCC

characteristic: pcr primers

text: OutoActive

text: uncultured bacterium

text: Ion Torrent

text: Bacterial 16S rRNA gene

characteristic: target gene


text: LSA-DISTAL-UNIBO

text: public

text: Ileum genetic trial 42 d group B

characteristic: description

text: chicken

characteristic: environment (biome)

text: ileum content

characteristic: environment (feature)

text: ileum content

characteristic: environment (material)

text: Italy

characteristic: geographic location (country and/or sea)

text: 44°26'4272 N

characteristic: geographic location (latitude)

text: 11°28'3540 E

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: metagenome

characteristic: organism

text: LSA genetic trial

text: metagenome

text: shotgun

characteristic: title


C. riparius WGS HiSeq 2500 PE 100bp

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MAINZ

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: C. riparius WGS HiSeq 2500 PE 100bp

text: Chironomus riparius Laufer

characteristic: ecotype

text: Chironomus riparius

text: Chironomus riparius

text: Chironomus riparius WGS


C. riparius WGS HiSeq 2500 PE 200bp

text: MAINZ

text: public

text: C. riparius WGS HiSeq 2500 PE 200bp

characteristic: Submitter Id

text: Chironomus riparius Laufer

text: Chironomus riparius

text: Chironomus riparius

text: Chironomus riparius WGS


C. riparius WGS MiSeq PE 200bp

text: MAINZ

text: public

text: C. riparius WGS MiSeq PE 200bp

text: Chironomus riparius Laufer

text: Chironomus riparius

text: Chironomus riparius

text: Chironomus riparius WGS


C. riparius WGS HiSeq 2500 MP 3000bp

text: MAINZ

text: public

text: C. riparius WGS HiSeq 2500 MP 3000bp

text: Chironomus riparius Laufer

text: Chironomus riparius

text: Chironomus riparius

text: Chironomus riparius WGS


C. riparius WGS HiSeq 2500 MP 5500bp

text: MAINZ

text: public

text: C. riparius WGS HiSeq 2500 MP 5500bp

text: Chironomus riparius Laufer

text: Chironomus riparius

text: Chironomus riparius

text: Chironomus riparius WGS


text: University College London

text: public

tag: Namespace:University College London

unit: day

characteristic: age

text: ArrayExpress

characteristic: broker name

text: fruit fly

characteristic: common name

text: Protocols: mid-guts dissected feeding RU486 TRIZOL followed by clean up TruSeq

characteristic: description

characteristic: genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: midgut

characteristic: organism part

text: control

characteristic: rna interference

text: Drosophila melanogaster

text: female

characteristic: sex


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University College London

text: public

text: ArrayExpress

text: fruit fly

text: Drosophila melanogaster

characteristic: organism

text: Drosophila melanogaster

text: midgut

text: Drosophila melanogaster

text: female

characteristic: title


text: Listeria monocytogenes 1/2a

characteristic: ArrayExpress-Species

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Listeria monocytogenes 1/2a

text: Listeria monocytogenes

text: Listeria monocytogenes


text: Listeria monocytogenes 1/2b

text: SC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Listeria monocytogenes 1/2b

characteristic: common name

text: Listeria monocytogenes

text: Listeria monocytogenes


text: Listeria monocytogenes 1/2c

text: SC

text: public

text: Listeria monocytogenes 1/2c

text: Listeria monocytogenes

text: Listeria monocytogenes


text: Listeria monocytogenes 4b

text: SC

text: public

text: Listeria monocytogenes 4b

text: Listeria monocytogenes

text: Listeria monocytogenes


text: UNIVERSITY OF LIVERPOOL

text: public

characteristic: collection date

text: Human

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human gut

characteristic: environment (feature)

text: stool

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: stool

characteristic: host body product

text: C

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: mimarks-survey

characteristic: investigation type

text: Homo sapiens

text: Effect of diet on human gut microbiota

characteristic: project name

text: Homo sapiens

text: Illumina MiSeq paired-end 250bp

characteristic: sequencing method

text: M

characteristic: special diet


text: Listeria monocytogenes 3c

characteristic: ArrayExpress-Species

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Listeria monocytogenes 3c

text: Listeria monocytogenes

characteristic: organism

text: Listeria monocytogenes

characteristic: title


text: Listeria monocytogenes 4d

text: SC

text: public

text: Listeria monocytogenes 4d

characteristic: common name

text: Listeria monocytogenes

text: Listeria monocytogenes


text: Listeria monocytogenes 3a

text: SC

text: public

text: Listeria monocytogenes 3a

text: Listeria monocytogenes

text: Listeria monocytogenes


text: Listeria monocytogenes 3b

text: SC

text: public

text: Listeria monocytogenes 3b

text: Listeria monocytogenes

text: Listeria monocytogenes


text: Listeria monocytogenes 4c

text: SC

text: public

text: Listeria monocytogenes 4c

text: Listeria monocytogenes

text: Listeria monocytogenes


text: Listeria monocytogenes 4a

text: SC

text: public

text: Listeria monocytogenes 4a

text: Listeria monocytogenes

text: Listeria monocytogenes


text: SSI

text: public

text: SSI

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Escherichia coli

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: Historical Danish E coli outbreaks


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF LIVERPOOL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Human

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human gut

characteristic: environment (feature)

text: stool

characteristic: environment (material)

text: United Kingdom

text: stool

characteristic: host body product

text: C

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: mimarks-survey

characteristic: investigation type

text: Homo sapiens

text: Effect of diet on human gut microbiota

characteristic: project name

text: Homo sapiens

text: Illumina MiSeq paired-end 250bp

characteristic: sequencing method

text: W

characteristic: special diet


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LSA-DISTAL-UNIBO

text: public

characteristic: Submitter Id

characteristic: collection date

text: Ileum genetic trial 42 d group B

text: chicken

text: ileum content

text: ileum content

text: Italy

characteristic: geographic location (country and/or sea)

text: 44°26'4272 N

characteristic: geographic location (latitude)

text: 11°28'3540 E

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

text: metagenome

characteristic: organism

text: LSA genetic trial

text: metagenome

text: shotgun

characteristic: title


text: Streptococcus pneumoniae

characteristic: ArrayExpress-Species

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Streptococcus pneumoniae

characteristic: common name

text: Streptococcus pneumoniae

text: Whole Genome DNA

characteristic: sample description

text: Streptococcus pneumoniae

text: pneumococcus


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF LIVERPOOL

text: public

text: Human

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human gut

characteristic: environment (feature)

text: stool

characteristic: environment (material)

text: United Kingdom

text: stool

characteristic: host body product

text: C

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: mimarks-survey

characteristic: investigation type

text: Homo sapiens

text: Effect of diet on human gut microbiota

characteristic: project name

text: Homo sapiens

text: Illumina MiSeq paired-end 250bp

characteristic: sequencing method

text: RS

characteristic: special diet


text: 31003929; 31092817

text: Streptococcus pneumoniae

characteristic: ArrayExpress-Species

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: NLD

characteristic: SRA accession

characteristic: Submitter Id

text: Streptococcus pneumoniae

characteristic: common name

text: Streptococcus

characteristic: genus

text: Homo sapiens

characteristic: host

characteristic: isolate

text: Streptococcus pneumoniae

characteristic: organism

text: Whole Genome DNA

text: Streptococcus pneumoniae

text: pneumococcus

characteristic: title

type: AMR curated data - CABBAGE

value: chloramphenicol

value: susceptible

value: Streptococcus pneumoniae

value: cefotaxime

value: erythromycin

value: penicillin

value: tetracycline


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF LIVERPOOL

text: public

characteristic: collection date

text: Human

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human gut

characteristic: environment (feature)

text: stool

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: stool

characteristic: host body product

text: C

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: mimarks-survey

characteristic: investigation type

text: Homo sapiens

text: Effect of diet on human gut microbiota

text: Homo sapiens

text: Illumina MiSeq paired-end 250bp

text: C


text: UNIVERSITY OF LIVERPOOL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Human

characteristic: common name

text: human-associated habitat

text: human gut

text: stool

text: United Kingdom

text: stool

text: D

text: human-gut

text: mimarks-survey

text: Homo sapiens

characteristic: organism

text: Effect of diet on human gut microbiota

characteristic: project name

text: Homo sapiens

text: Illumina MiSeq paired-end 250bp

characteristic: sequencing method

text: M

characteristic: special diet

characteristic: title


text: 31003929; 31092817

text: Streptococcus pneumoniae

characteristic: ArrayExpress-Species

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: NLD

text: Streptococcus pneumoniae

text: Streptococcus

characteristic: genus

text: Homo sapiens

characteristic: host

characteristic: isolate

text: Streptococcus pneumoniae

text: Whole Genome DNA

characteristic: sample description

text: Streptococcus pneumoniae

text: pneumococcus


text: 31003929; 31092817

text: Streptococcus pneumoniae

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: NLD

characteristic: SRA accession

text: Streptococcus pneumoniae

text: Streptococcus

text: Homo sapiens

text: Streptococcus pneumoniae

text: Whole Genome DNA

text: Streptococcus pneumoniae

text: pneumococcus


text: 31003929; 31092817

text: Streptococcus pneumoniae

text: SC

text: public

text: NLD

characteristic: Submitter Id

text: Streptococcus pneumoniae

characteristic: common name

text: Streptococcus

text: Homo sapiens

text: Streptococcus pneumoniae

characteristic: organism

text: Whole Genome DNA

text: Streptococcus pneumoniae

text: pneumococcus


text: 31003929; 31092817

text: Streptococcus pneumoniae

characteristic: ArrayExpress-Species

text: SC

text: public

text: NLD

text: Streptococcus pneumoniae

text: Streptococcus

text: Homo sapiens

text: Streptococcus pneumoniae

text: Whole Genome DNA

text: Streptococcus pneumoniae

text: pneumococcus

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF LIVERPOOL

text: public

characteristic: collection date

text: Human

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human gut

characteristic: environment (feature)

text: stool

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: stool

characteristic: host body product

text: D

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: mimarks-survey

characteristic: investigation type

text: Homo sapiens

text: Effect of diet on human gut microbiota

characteristic: project name

text: Homo sapiens

text: Illumina MiSeq paired-end 250bp

characteristic: sequencing method

text: W

characteristic: special diet


text: 31003929; 31092817

text: Streptococcus pneumoniae

characteristic: ArrayExpress-Species

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: NLD

characteristic: SRA accession

characteristic: Submitter Id

text: Streptococcus pneumoniae

characteristic: common name

text: Streptococcus

characteristic: genus

text: Homo sapiens

characteristic: host

characteristic: isolate

text: Streptococcus pneumoniae

characteristic: organism

text: Whole Genome DNA

characteristic: sample description

text: Streptococcus pneumoniae

text: pneumococcus

characteristic: title


text: 31003929; 31092817

text: Streptococcus pneumoniae

characteristic: ArrayExpress-Species

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: NLD

text: Streptococcus pneumoniae

text: Streptococcus

text: Homo sapiens

text: Streptococcus pneumoniae

text: Whole Genome DNA

text: Streptococcus pneumoniae

text: pneumococcus


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF LIVERPOOL

text: public

characteristic: collection date

text: Human

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human gut

characteristic: environment (feature)

text: stool

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: stool

characteristic: host body product

text: D

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: mimarks-survey

characteristic: investigation type

text: Homo sapiens

text: Effect of diet on human gut microbiota

characteristic: project name

text: Homo sapiens

text: Illumina MiSeq paired-end 250bp

characteristic: sequencing method

text: C

characteristic: special diet


text: 31003929; 31092817

text: Streptococcus pneumoniae

characteristic: ArrayExpress-Species

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: NLD

characteristic: SRA accession

characteristic: Submitter Id

text: Streptococcus pneumoniae

characteristic: common name

text: Streptococcus

characteristic: genus

text: Homo sapiens

characteristic: host

characteristic: isolate

text: Streptococcus pneumoniae

characteristic: organism

text: Whole Genome DNA

characteristic: sample description

text: Streptococcus pneumoniae

text: pneumococcus

characteristic: title


characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF LIVERPOOL

text: public

characteristic: collection date

text: Human

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human gut

characteristic: environment (feature)

text: stool

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: stool

characteristic: host body product

text: D

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: mimarks-survey

characteristic: investigation type

text: Homo sapiens

text: Effect of diet on human gut microbiota

characteristic: project name

text: Homo sapiens

text: Illumina MiSeq paired-end 250bp

characteristic: sequencing method

text: RS

characteristic: special diet


text: 31003929; 31092817

text: Streptococcus pneumoniae

characteristic: ArrayExpress-Species

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: NLD

characteristic: SRA accession

characteristic: Submitter Id

text: Streptococcus pneumoniae

characteristic: common name

text: Streptococcus

characteristic: genus

text: Homo sapiens

characteristic: host

characteristic: isolate

text: Streptococcus pneumoniae

characteristic: organism

text: Whole Genome DNA

characteristic: sample description

text: Streptococcus pneumoniae

text: pneumococcus

characteristic: title


text: Streptococcus pneumoniae

characteristic: ArrayExpress-Species

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: NLD

text: Streptococcus pneumoniae

text: Streptococcus

text: Homo sapiens

text: Streptococcus pneumoniae

text: Whole Genome DNA

text: Streptococcus pneumoniae

text: pneumococcus

value: resistant


text: Streptococcus pneumoniae

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Whole Genome DNA

text: Streptococcus pneumoniae

text: pneumococcus


text: 31003929; 31092817

text: Streptococcus pneumoniae

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: NLD

text: Streptococcus pneumoniae

text: Streptococcus

text: Homo sapiens

text: Streptococcus pneumoniae

text: Whole Genome DNA

text: Streptococcus pneumoniae

text: pneumococcus


text: UNIVERSITY OF LIVERPOOL

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: collection date

text: Human

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human gut

characteristic: environment (feature)

text: stool

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: stool

characteristic: host body product

text: E

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: mimarks-survey

characteristic: investigation type

text: Homo sapiens

text: Effect of diet on human gut microbiota

characteristic: project name

text: Homo sapiens

text: Illumina MiSeq paired-end 250bp

characteristic: sequencing method

text: M

characteristic: special diet


text: 31003929; 31092817

text: Streptococcus pneumoniae

characteristic: ArrayExpress-Species

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: NLD

characteristic: SRA accession

characteristic: Submitter Id

text: Streptococcus pneumoniae

characteristic: common name

text: Streptococcus

characteristic: genus

text: Homo sapiens

characteristic: host

characteristic: isolate

text: Streptococcus pneumoniae

characteristic: organism

text: Whole Genome DNA

characteristic: sample description

text: Streptococcus pneumoniae

text: pneumococcus

characteristic: title


text: 31003929; 31092817

text: Streptococcus pneumoniae

characteristic: ArrayExpress-Species

text: SC

characteristic: INSDC last update

text: public

text: NLD

text: Streptococcus pneumoniae

text: Streptococcus

text: Homo sapiens

text: Streptococcus pneumoniae

text: Whole Genome DNA

text: Streptococcus pneumoniae

text: pneumococcus


text: 31003929; 31092817

text: Streptococcus pneumoniae

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: NLD

text: Streptococcus pneumoniae

text: Streptococcus

text: Homo sapiens

text: Streptococcus pneumoniae

text: Whole Genome DNA

text: Streptococcus pneumoniae

text: pneumococcus


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF LIVERPOOL

text: public

characteristic: collection date

text: Human

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human gut

characteristic: environment (feature)

text: stool

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: stool

characteristic: host body product

text: E

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: mimarks-survey

characteristic: investigation type

text: Homo sapiens

text: Effect of diet on human gut microbiota

characteristic: project name

text: Homo sapiens

text: Illumina MiSeq paired-end 250bp

characteristic: sequencing method

text: W

characteristic: special diet


text: 31003929; 31092817

text: Streptococcus pneumoniae

characteristic: ArrayExpress-Species

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: NLD

characteristic: SRA accession

characteristic: Submitter Id

text: Streptococcus pneumoniae

characteristic: common name

text: Streptococcus

characteristic: genus

text: Homo sapiens

characteristic: host

characteristic: isolate

text: Streptococcus pneumoniae

characteristic: organism

text: Whole Genome DNA

characteristic: sample description

text: Streptococcus pneumoniae

text: pneumococcus

characteristic: title


text: 31003929; 31092817

text: Streptococcus pneumoniae

characteristic: ArrayExpress-Species

characteristic: External Id

text: SC

text: public

text: NLD

text: Streptococcus pneumoniae

text: Streptococcus

text: Homo sapiens

text: Streptococcus pneumoniae

text: Whole Genome DNA

text: Streptococcus pneumoniae

text: pneumococcus


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF LIVERPOOL

text: public

characteristic: collection date

text: Human

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human gut

characteristic: environment (feature)

text: stool

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: stool

characteristic: host body product

text: E

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: mimarks-survey

characteristic: investigation type

text: Homo sapiens

text: Effect of diet on human gut microbiota

characteristic: project name

text: Homo sapiens

text: Illumina MiSeq paired-end 250bp

characteristic: sequencing method

text: C

characteristic: special diet


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF LIVERPOOL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Human

characteristic: common name

text: human-associated habitat

text: human gut

text: stool

text: United Kingdom

text: stool

text: E

text: human-gut

text: mimarks-survey

text: Homo sapiens

characteristic: organism

text: Effect of diet on human gut microbiota

text: Homo sapiens

text: Illumina MiSeq paired-end 250bp

text: RS

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF LIVERPOOL

text: public

characteristic: collection date

text: Human

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human gut

characteristic: environment (feature)

text: stool

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: stool

characteristic: host body product

text: F

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: mimarks-survey

text: Homo sapiens

text: Effect of diet on human gut microbiota

text: Homo sapiens

text: Illumina MiSeq paired-end 250bp

text: M


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF LIVERPOOL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Human

text: human-associated habitat

text: human gut

text: stool

text: United Kingdom

text: stool

text: F

text: human-gut

text: mimarks-survey

characteristic: investigation type

text: Homo sapiens

text: Effect of diet on human gut microbiota

characteristic: project name

text: Homo sapiens

text: Illumina MiSeq paired-end 250bp

characteristic: sequencing method

text: W

characteristic: special diet


characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF LIVERPOOL

text: public

characteristic: Submitter Id

characteristic: collection date

text: Human

characteristic: common name

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human gut

characteristic: environment (feature)

text: stool

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: stool

text: F

text: human-gut

text: mimarks-survey

text: Homo sapiens

characteristic: organism

text: Effect of diet on human gut microbiota

text: Homo sapiens

text: Illumina MiSeq paired-end 250bp

text: RS

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF LIVERPOOL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Human

text: human-associated habitat

text: human gut

text: stool

text: United Kingdom

characteristic: geographic location (longitude)

text: stool

characteristic: host body product

text: F

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: mimarks-survey

text: Homo sapiens

text: Effect of diet on human gut microbiota

text: Homo sapiens

text: Illumina MiSeq paired-end 250bp

text: C


characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF LIVERPOOL

text: public

characteristic: Submitter Id

characteristic: collection date

text: Human

characteristic: common name

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human gut

characteristic: environment (feature)

text: stool

characteristic: environment (material)

text: United Kingdom

text: stool

text: G

text: human-gut

text: mimarks-survey

characteristic: investigation type

text: Homo sapiens

text: Effect of diet on human gut microbiota

characteristic: project name

text: Homo sapiens

text: Illumina MiSeq paired-end 250bp

characteristic: sequencing method

text: M

characteristic: special diet


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF LIVERPOOL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Human

text: human-associated habitat

text: human gut

text: stool

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: stool

text: G

text: human-gut

text: mimarks-survey

text: Homo sapiens

characteristic: organism

text: Effect of diet on human gut microbiota

text: Homo sapiens

text: Illumina MiSeq paired-end 250bp

text: W

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF LIVERPOOL

text: public

characteristic: Submitter Id

characteristic: collection date

text: Human

characteristic: common name

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human gut

characteristic: environment (feature)

text: stool

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (longitude)

text: stool

characteristic: host body product

text: G

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: mimarks-survey

text: Homo sapiens

text: Effect of diet on human gut microbiota

text: Homo sapiens

text: Illumina MiSeq paired-end 250bp

text: RS