text: UCSDMI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Restricted access

characteristic: age

text: years

text: UBERON:skin

characteristic: body habitat

text: UBERON:sebum

characteristic: body product

text: UBERON:skin of face

characteristic: body site

text: sample 8D3

text: TRUE

text: urban biome

text: human-associated habitat

characteristic: env feature

text: human-skin

characteristic: env package

text: sebum

text: USA:CA:San Diego

characteristic: geo loc name

text: true

text: Missing: Restricted access

characteristic: height or length

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

text: Volunteer 3

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

text: human skin metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: Face

characteristic: sample site

text: skin

text: human skin metagenome

text: female

characteristic: sex

text: Volunteer 3

characteristic: subject

text: Time 3

text: Hygiene products and microbiome

text: Missing: Restricted access


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Restricted access

text: years

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of face

text: sample 8D4

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

text: human-skin

text: sebum

text: USA:CA:San Diego

text: true

text: Missing: Restricted access

text: human

text: Homo sapiens

text: Volunteer 3

characteristic: longitude

text: human skin metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: Face

text: skin

characteristic: sample type

text: human skin metagenome

text: female

text: Volunteer 3

text: Time 3

characteristic: timepoint

characteristic: title

text: Hygiene products and microbiome

text: Missing: Restricted access

type: has member


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

text: Missing: Restricted access

characteristic: age

text: years

text: UBERON:skin

characteristic: body habitat

text: UBERON:sebum

characteristic: body product

text: UBERON:skin of face

characteristic: body site

text: sample 8D5

text: TRUE

text: urban biome

text: human-associated habitat

characteristic: env feature

text: human-skin

characteristic: env package

text: sebum

text: USA:CA:San Diego

characteristic: geo loc name

text: true

text: Missing: Restricted access

characteristic: height or length

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

text: Volunteer 3

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

text: human skin metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: Face

characteristic: sample site

text: skin

text: human skin metagenome

text: female

characteristic: sex

text: Volunteer 3

characteristic: subject

text: Time 3

text: Hygiene products and microbiome

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Restricted access

text: years

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of face

text: sample 8D6

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

text: human-skin

text: sebum

text: USA:CA:San Diego

text: true

text: Missing: Restricted access

text: human

text: Homo sapiens

text: Volunteer 3

characteristic: longitude

text: human skin metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: Face

text: skin

characteristic: sample type

text: human skin metagenome

text: female

text: Volunteer 3

text: Time 3

characteristic: timepoint

text: Hygiene products and microbiome

characteristic: title

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

text: Missing: Restricted access

characteristic: age

text: years

text: UBERON:skin

characteristic: body habitat

text: UBERON:sebum

characteristic: body product

text: UBERON:arm pit

characteristic: body site

text: sample 8D7

text: TRUE

text: urban biome

text: human-associated habitat

characteristic: env feature

text: human-skin

characteristic: env package

text: sebum

text: USA:CA:San Diego

characteristic: geo loc name

text: true

text: Missing: Restricted access

characteristic: height or length

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

text: Volunteer 3

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

text: human skin metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: Armpit

characteristic: sample site

text: skin

text: human skin metagenome

text: female

characteristic: sex

text: Volunteer 3

characteristic: subject

text: Time 3

text: Hygiene products and microbiome

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Restricted access

text: years

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

text: UBERON:sebum

text: UBERON:arm pit

text: sample 8D8

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

text: human-skin

text: sebum

text: USA:CA:San Diego

text: true

text: Missing: Restricted access

text: human

text: Homo sapiens

text: Volunteer 3

characteristic: longitude

text: human skin metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: Armpit

text: skin

characteristic: sample type

text: human skin metagenome

text: female

text: Volunteer 3

text: Time 3

characteristic: timepoint

text: Hygiene products and microbiome

characteristic: title

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

text: Missing: Restricted access

characteristic: age

text: years

text: UBERON:skin

characteristic: body habitat

text: UBERON:sebum

characteristic: body product

text: UBERON:arm pit

characteristic: body site

text: sample 8D9

text: TRUE

text: urban biome

text: human-associated habitat

characteristic: env feature

text: human-skin

characteristic: env package

text: sebum

text: USA:CA:San Diego

characteristic: geo loc name

text: true

text: Missing: Restricted access

characteristic: height or length

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

text: Volunteer 3

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

text: human skin metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: Armpit

characteristic: sample site

text: skin

text: human skin metagenome

text: female

characteristic: sex

text: Volunteer 3

characteristic: subject

text: Time 3

text: Hygiene products and microbiome

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Restricted access

text: years

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of arm

text: sample 8E1

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

text: human-skin

text: sebum

text: USA:CA:San Diego

text: true

text: Missing: Restricted access

text: human

text: Homo sapiens

text: Volunteer 3

characteristic: longitude

text: human skin metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: Arm

text: skin

characteristic: sample type

text: human skin metagenome

text: female

text: Volunteer 3

text: Time 3

characteristic: timepoint

characteristic: title

text: Hygiene products and microbiome

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

text: Missing: Restricted access

characteristic: age

text: years

text: UBERON:skin

characteristic: body habitat

text: UBERON:sebum

characteristic: body product

text: UBERON:skin of face

characteristic: body site

text: sample 8E10

text: TRUE

text: urban biome

text: human-associated habitat

characteristic: env feature

text: human-skin

characteristic: env package

text: sebum

text: USA:CA:San Diego

characteristic: geo loc name

text: true

text: Missing: Restricted access

characteristic: height or length

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

text: Volunteer 2

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

text: human skin metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: Face

characteristic: sample site

text: skin

text: human skin metagenome

text: female

characteristic: sex

text: Volunteer 2

characteristic: subject

text: Time 3

text: Hygiene products and microbiome

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Restricted access

text: years

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of face

text: sample 8E11

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

text: human-skin

text: sebum

text: USA:CA:San Diego

text: true

text: Missing: Restricted access

text: human

text: Homo sapiens

text: Volunteer 2

characteristic: longitude

text: human skin metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: Face

text: skin

characteristic: sample type

text: human skin metagenome

text: female

text: Volunteer 2

text: Time 3

characteristic: timepoint

text: Hygiene products and microbiome

characteristic: title

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

text: Missing: Restricted access

characteristic: age

text: years

text: UBERON:skin

characteristic: body habitat

text: UBERON:sebum

characteristic: body product

text: UBERON:arm pit

characteristic: body site

text: sample 8E12

text: TRUE

text: urban biome

text: human-associated habitat

characteristic: env feature

text: human-skin

characteristic: env package

text: sebum

text: USA:CA:San Diego

characteristic: geo loc name

text: true

text: Missing: Restricted access

characteristic: height or length

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

text: Volunteer 2

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

text: human skin metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: Armpit

characteristic: sample site

text: skin

text: human skin metagenome

text: female

characteristic: sex

text: Volunteer 2

characteristic: subject

text: Time 3

text: Hygiene products and microbiome

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Restricted access

text: years

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of arm

text: sample 8E2

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

text: human-skin

text: sebum

text: USA:CA:San Diego

text: true

text: Missing: Restricted access

text: human

text: Homo sapiens

text: Volunteer 3

characteristic: longitude

text: human skin metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: Arm

text: skin

characteristic: sample type

text: human skin metagenome

text: female

text: Volunteer 3

text: Time 3

characteristic: timepoint

characteristic: title

text: Hygiene products and microbiome

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

text: Missing: Restricted access

characteristic: age

text: years

text: UBERON:skin

characteristic: body habitat

text: UBERON:sebum

characteristic: body product

text: UBERON:skin of foot

characteristic: body site

text: sample 8E3

text: TRUE

text: urban biome

text: human-associated habitat

characteristic: env feature

text: human-skin

characteristic: env package

text: sebum

text: USA:CA:San Diego

characteristic: geo loc name

text: true

text: Missing: Restricted access

characteristic: height or length

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

text: Volunteer 3

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

text: human skin metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: Foot

characteristic: sample site

text: skin

text: human skin metagenome

text: female

characteristic: sex

text: Volunteer 3

characteristic: subject

text: Time 3

text: Hygiene products and microbiome

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Restricted access

text: years

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of foot

text: sample 8E4

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

text: human-skin

text: sebum

text: USA:CA:San Diego

text: true

text: Missing: Restricted access

text: human

text: Homo sapiens

text: Volunteer 3

characteristic: longitude

text: human skin metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: Foot

text: skin

characteristic: sample type

text: human skin metagenome

text: female

text: Volunteer 3

text: Time 3

characteristic: timepoint

characteristic: title

text: Hygiene products and microbiome

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

text: Missing: Restricted access

characteristic: age

text: years

text: UBERON:skin

characteristic: body habitat

text: UBERON:sebum

characteristic: body product

text: UBERON:skin of foot

characteristic: body site

text: sample 8E5

text: TRUE

text: urban biome

text: human-associated habitat

characteristic: env feature

text: human-skin

characteristic: env package

text: sebum

text: USA:CA:San Diego

characteristic: geo loc name

text: true

text: Missing: Restricted access

characteristic: height or length

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

text: Volunteer 3

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

text: human skin metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: Foot

characteristic: sample site

text: skin

text: human skin metagenome

text: female

characteristic: sex

text: Volunteer 3

characteristic: subject

text: Time 3

text: Hygiene products and microbiome

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Restricted access

text: years

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of foot

text: sample 8E6

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

text: human-skin

text: sebum

text: USA:CA:San Diego

text: true

text: Missing: Restricted access

text: human

text: Homo sapiens

text: Volunteer 3

characteristic: longitude

text: human skin metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: Foot

text: skin

characteristic: sample type

text: human skin metagenome

text: female

text: Volunteer 3

text: Time 3

characteristic: timepoint

characteristic: title

text: Hygiene products and microbiome

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

text: years

text: sample 8E7.Empty

text: TRUE

text: urban biome

text: research facility

characteristic: env feature

text: misc environment

characteristic: env package

text: sterile water

text: USA:CA:San Diego

characteristic: geo loc name

text: true

characteristic: host subject id

characteristic: latitude

text: metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: empty control

text: metagenome

text: Time 3

text: Hygiene products and microbiome


text: UCSDMI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Restricted access

characteristic: age

text: years

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

characteristic: body habitat

text: UBERON:sebum

characteristic: body product

text: UBERON:skin of face

characteristic: body site

text: sample 8E8

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

text: human-skin

text: sebum

text: USA:CA:San Diego

text: true

text: Missing: Restricted access

characteristic: height or length

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

text: Volunteer 2

characteristic: host taxid

text: human skin metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: Face

characteristic: sample site

text: skin

text: human skin metagenome

text: female

characteristic: sex

text: Volunteer 2

characteristic: subject

text: Time 3

text: Hygiene products and microbiome

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Restricted access

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of face

text: sample 8E9

text: TRUE

text: urban biome

text: human-associated habitat

characteristic: env feature

text: human-skin

characteristic: env package

text: sebum

text: USA:CA:San Diego

characteristic: geo loc name

text: true

text: Missing: Restricted access

text: human

text: Homo sapiens

text: Volunteer 2

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: human skin metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: Face

text: skin

characteristic: sample type

text: human skin metagenome

text: female

text: Volunteer 2

text: Time 3

characteristic: timepoint

text: Hygiene products and microbiome

characteristic: title

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

text: Missing: Restricted access

characteristic: age

text: years

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

characteristic: body habitat

text: UBERON:sebum

characteristic: body product

text: UBERON:arm pit

characteristic: body site

text: sample 8F1

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

text: human-skin

text: sebum

text: USA:CA:San Diego

text: true

text: Missing: Restricted access

characteristic: height or length

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

text: Volunteer 2

characteristic: host taxid

text: human skin metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: Armpit

characteristic: sample site

text: skin

text: human skin metagenome

text: female

characteristic: sex

text: Volunteer 2

characteristic: subject

text: Time 3

text: Hygiene products and microbiome

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Restricted access

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of foot

text: sample 8F10

text: TRUE

text: urban biome

text: human-associated habitat

characteristic: env feature

text: human-skin

characteristic: env package

text: sebum

text: USA:CA:San Diego

characteristic: geo loc name

text: true

text: Missing: Restricted access

text: human

text: Homo sapiens

text: Volunteer 2

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: human skin metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: Foot

text: skin

characteristic: sample type

text: human skin metagenome

text: female

text: Volunteer 2

text: Time 3

characteristic: timepoint

text: Hygiene products and microbiome

characteristic: title

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

text: Missing: Restricted access

characteristic: age

text: years

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

characteristic: body habitat

text: UBERON:sebum

characteristic: body product

text: UBERON:skin of foot

characteristic: body site

text: sample 8F11

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

text: human-skin

text: sebum

text: USA:CA:San Diego

text: true

text: Missing: Restricted access

characteristic: height or length

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

text: Volunteer 2

characteristic: host taxid

text: human skin metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: Foot

characteristic: sample site

text: skin

text: human skin metagenome

text: female

characteristic: sex

text: Volunteer 2

characteristic: subject

text: Time 3

text: Hygiene products and microbiome

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: years

text: sample 8F12.Empty

text: TRUE

text: urban biome

text: research facility

characteristic: env feature

text: misc environment

characteristic: env package

text: sterile water

text: USA:CA:San Diego

characteristic: geo loc name

text: true

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: empty control

characteristic: sample type

text: metagenome

text: Time 3

characteristic: timepoint

text: Hygiene products and microbiome

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

text: Missing: Restricted access

characteristic: age

text: years

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

characteristic: body habitat

text: UBERON:sebum

characteristic: body product

text: UBERON:arm pit

characteristic: body site

text: sample 8F2

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

text: human-skin

text: sebum

text: USA:CA:San Diego

text: true

text: Missing: Restricted access

characteristic: height or length

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

text: Volunteer 2

characteristic: host taxid

text: human skin metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: Armpit

characteristic: sample site

text: skin

text: human skin metagenome

text: female

characteristic: sex

text: Volunteer 2

characteristic: subject

text: Time 3

text: Hygiene products and microbiome

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Restricted access

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:arm pit

text: sample 8F3

text: TRUE

text: urban biome

text: human-associated habitat

characteristic: env feature

text: human-skin

characteristic: env package

text: sebum

text: USA:CA:San Diego

characteristic: geo loc name

text: true

text: Missing: Restricted access

text: human

text: Homo sapiens

text: Volunteer 2

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: human skin metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: Armpit

text: skin

characteristic: sample type

text: human skin metagenome

text: female

text: Volunteer 2

text: Time 3

characteristic: timepoint

characteristic: title

text: Hygiene products and microbiome

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

text: Missing: Restricted access

characteristic: age

text: years

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

characteristic: body habitat

text: UBERON:sebum

characteristic: body product

text: UBERON:skin of arm

characteristic: body site

text: sample 8F4

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

text: human-skin

text: sebum

text: USA:CA:San Diego

text: true

text: Missing: Restricted access

characteristic: height or length

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

text: Volunteer 2

characteristic: host taxid

text: human skin metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: Arm

characteristic: sample site

text: skin

text: human skin metagenome

text: female

characteristic: sex

text: Volunteer 2

characteristic: subject

text: Time 3

text: Hygiene products and microbiome

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Restricted access

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of arm

text: sample 8F5

text: TRUE

text: urban biome

text: human-associated habitat

characteristic: env feature

text: human-skin

characteristic: env package

text: sebum

text: USA:CA:San Diego

characteristic: geo loc name

text: true

text: Missing: Restricted access

text: human

text: Homo sapiens

text: Volunteer 2

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: human skin metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: Arm

text: skin

characteristic: sample type

text: human skin metagenome

text: female

text: Volunteer 2

text: Time 3

characteristic: timepoint

characteristic: title

text: Hygiene products and microbiome

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

text: Missing: Restricted access

characteristic: age

text: years

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

characteristic: body habitat

text: UBERON:sebum

characteristic: body product

text: UBERON:skin of arm

characteristic: body site

text: sample 8F6

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

text: human-skin

text: sebum

text: USA:CA:San Diego

text: true

text: Missing: Restricted access

characteristic: height or length

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

text: Volunteer 2

characteristic: host taxid

text: human skin metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: Arm

characteristic: sample site

text: skin

text: human skin metagenome

text: female

characteristic: sex

text: Volunteer 2

characteristic: subject

text: Time 3

text: Hygiene products and microbiome

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Restricted access

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of arm

text: sample 8F7

text: TRUE

text: urban biome

text: human-associated habitat

characteristic: env feature

text: human-skin

characteristic: env package

text: sebum

text: USA:CA:San Diego

characteristic: geo loc name

text: true

text: Missing: Restricted access

text: human

text: Homo sapiens

text: Volunteer 2

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: human skin metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: Arm

text: skin

characteristic: sample type

text: human skin metagenome

text: female

text: Volunteer 2

text: Time 3

characteristic: timepoint

characteristic: title

text: Hygiene products and microbiome

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

text: Missing: Restricted access

characteristic: age

text: years

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

characteristic: body habitat

text: UBERON:sebum

characteristic: body product

text: UBERON:skin of foot

characteristic: body site

text: sample 8F8

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

text: human-skin

text: sebum

text: USA:CA:San Diego

text: true

text: Missing: Restricted access

characteristic: height or length

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

text: Volunteer 2

characteristic: host taxid

text: human skin metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: Foot

characteristic: sample site

text: skin

text: human skin metagenome

text: female

characteristic: sex

text: Volunteer 2

characteristic: subject

text: Time 3

text: Hygiene products and microbiome

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Restricted access

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of foot

text: sample 8F9

text: TRUE

text: urban biome

text: human-associated habitat

characteristic: env feature

text: human-skin

characteristic: env package

text: sebum

text: USA:CA:San Diego

characteristic: geo loc name

text: true

text: Missing: Restricted access

text: human

text: Homo sapiens

text: Volunteer 2

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: human skin metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: Foot

text: skin

characteristic: sample type

text: human skin metagenome

text: female

text: Volunteer 2

text: Time 3

characteristic: timepoint

text: Hygiene products and microbiome

characteristic: title

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

text: years

characteristic: age unit

characteristic: anonymized name

text: sample 8G1.Empty

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

text: misc environment

text: sterile water

text: USA:CA:San Diego

text: true

text: metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: empty control

text: metagenome

text: Time 3

text: Hygiene products and microbiome


text: UCSDMI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Restricted access

characteristic: age

text: years

text: UBERON:skin

characteristic: body habitat

text: UBERON:sebum

characteristic: body product

text: UBERON:skin of arm

characteristic: body site

text: sample 8G10

text: TRUE

text: urban biome

text: human-associated habitat

characteristic: env feature

text: human-skin

characteristic: env package

text: sebum

text: USA:CA:San Diego

characteristic: geo loc name

text: true

text: Missing: Restricted access

characteristic: height or length

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

text: Volunteer 11

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

text: human skin metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: Arm

characteristic: sample site

text: skin

text: human skin metagenome

text: male

characteristic: sex

text: Volunteer 11

characteristic: subject

text: Time 3

text: Hygiene products and microbiome

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Restricted access

text: years

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of arm

text: sample 8G11

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

text: human-skin

text: sebum

text: USA:CA:San Diego

text: true

text: Missing: Restricted access

text: human

text: Homo sapiens

text: Volunteer 11

characteristic: longitude

text: human skin metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: Arm

text: skin

characteristic: sample type

text: human skin metagenome

text: male

text: Volunteer 11

text: Time 3

characteristic: timepoint

characteristic: title

text: Hygiene products and microbiome

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

text: Missing: Restricted access

characteristic: age

text: years

text: UBERON:skin

characteristic: body habitat

text: UBERON:sebum

characteristic: body product

text: UBERON:skin of arm

characteristic: body site

text: sample 8G12

text: TRUE

text: urban biome

text: human-associated habitat

characteristic: env feature

text: human-skin

characteristic: env package

text: sebum

text: USA:CA:San Diego

characteristic: geo loc name

text: true

text: Missing: Restricted access

characteristic: height or length

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

text: Volunteer 11

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

text: human skin metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: Arm

characteristic: sample site

text: skin

text: human skin metagenome

text: male

characteristic: sex

text: Volunteer 11

characteristic: subject

text: Time 3

text: Hygiene products and microbiome

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Restricted access

text: years

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of face

text: sample 8G2

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

text: human-skin

text: sebum

text: USA:CA:San Diego

text: true

text: Missing: Restricted access

text: human

text: Homo sapiens

text: Volunteer 11

characteristic: longitude

text: human skin metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: Face

text: skin

characteristic: sample type

text: human skin metagenome

text: male

text: Volunteer 11

text: Time 3

characteristic: timepoint

characteristic: title

text: Hygiene products and microbiome

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

text: Missing: Restricted access

characteristic: age

text: years

text: UBERON:skin

characteristic: body habitat

text: UBERON:sebum

characteristic: body product

text: UBERON:skin of face

characteristic: body site

text: sample 8G3

text: TRUE

text: urban biome

text: human-associated habitat

characteristic: env feature

text: human-skin

characteristic: env package

text: sebum

text: USA:CA:San Diego

characteristic: geo loc name

text: true

text: Missing: Restricted access

characteristic: height or length

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

text: Volunteer 11

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

text: human skin metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: Face

characteristic: sample site

text: skin

text: human skin metagenome

text: male

characteristic: sex

text: Volunteer 11

characteristic: subject

text: Time 3

text: Hygiene products and microbiome

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Restricted access

text: years

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of face

text: sample 8G4

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

text: human-skin

text: sebum

text: USA:CA:San Diego

text: true

text: Missing: Restricted access

text: human

text: Homo sapiens

text: Volunteer 11

characteristic: longitude

text: human skin metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: Face

text: skin

characteristic: sample type

text: human skin metagenome

text: male

text: Volunteer 11

text: Time 3

characteristic: timepoint

characteristic: title

text: Hygiene products and microbiome

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

text: Missing: Restricted access

characteristic: age

text: years

text: UBERON:skin

characteristic: body habitat

text: UBERON:sebum

characteristic: body product

text: UBERON:skin of face

characteristic: body site

text: sample 8G5

text: TRUE

text: urban biome

text: human-associated habitat

characteristic: env feature

text: human-skin

characteristic: env package

text: sebum

text: USA:CA:San Diego

characteristic: geo loc name

text: true

text: Missing: Restricted access

characteristic: height or length

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

text: Volunteer 11

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

text: human skin metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: Face

characteristic: sample site

text: skin

text: human skin metagenome

text: male

characteristic: sex

text: Volunteer 11

characteristic: subject

text: Time 3

text: Hygiene products and microbiome

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Restricted access

text: years

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

text: UBERON:sebum

text: UBERON:arm pit

text: sample 8G6

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

text: human-skin

text: sebum

text: USA:CA:San Diego

text: true

text: Missing: Restricted access

text: human

text: Homo sapiens

text: Volunteer 11

characteristic: longitude

text: human skin metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: Armpit

text: skin

characteristic: sample type

text: human skin metagenome

text: male

text: Volunteer 11

text: Time 3

characteristic: timepoint

characteristic: title

text: Hygiene products and microbiome

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

text: Missing: Restricted access

characteristic: age

text: years

text: UBERON:skin

characteristic: body habitat

text: UBERON:sebum

characteristic: body product

text: UBERON:arm pit

characteristic: body site

text: sample 8G7

text: TRUE

text: urban biome

text: human-associated habitat

characteristic: env feature

text: human-skin

characteristic: env package

text: sebum

text: USA:CA:San Diego

characteristic: geo loc name

text: true

text: Missing: Restricted access

characteristic: height or length

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

text: Volunteer 11

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

text: human skin metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: Armpit

characteristic: sample site

text: skin

text: human skin metagenome

text: male

characteristic: sex

text: Volunteer 11

characteristic: subject

text: Time 3

text: Hygiene products and microbiome

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Restricted access

text: years

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

text: UBERON:sebum

text: UBERON:arm pit

text: sample 8G8

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

text: human-skin

text: sebum

text: USA:CA:San Diego

text: true

text: Missing: Restricted access

text: human

text: Homo sapiens

text: Volunteer 11

characteristic: longitude

text: human skin metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: Armpit

text: skin

characteristic: sample type

text: human skin metagenome

text: male

text: Volunteer 11

text: Time 3

characteristic: timepoint

characteristic: title

text: Hygiene products and microbiome

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

text: Missing: Restricted access

characteristic: age

text: years

text: UBERON:skin

characteristic: body habitat

text: UBERON:sebum

characteristic: body product

text: UBERON:arm pit

characteristic: body site

text: sample 8G9

text: TRUE

text: urban biome

text: human-associated habitat

characteristic: env feature

text: human-skin

characteristic: env package

text: sebum

text: USA:CA:San Diego

characteristic: geo loc name

text: true

text: Missing: Restricted access

characteristic: height or length

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

text: Volunteer 11

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

text: human skin metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: Armpit

characteristic: sample site

text: skin

text: human skin metagenome

text: male

characteristic: sex

text: Volunteer 11

characteristic: subject

text: Time 3

text: Hygiene products and microbiome

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Restricted access

text: years

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of arm

text: sample 8H1

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

text: human-skin

text: sebum

text: USA:CA:San Diego

text: true

text: Missing: Restricted access

text: human

text: Homo sapiens

text: Volunteer 11

characteristic: longitude

text: human skin metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: Arm

text: skin

characteristic: sample type

text: human skin metagenome

text: male

text: Volunteer 11

text: Time 3

characteristic: timepoint

characteristic: title

text: Hygiene products and microbiome

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

text: years

text: sample 8H10.Empty

text: TRUE

text: urban biome

text: research facility

characteristic: env feature

text: misc environment

characteristic: env package

text: sterile water

text: USA:CA:San Diego

characteristic: geo loc name

text: true

characteristic: host subject id

characteristic: latitude

text: metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: empty control

text: metagenome

text: Time 3

text: Hygiene products and microbiome


text: UCSDMI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: years

characteristic: age unit

characteristic: anonymized name

text: sample 8H11.Empty

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

text: misc environment

text: sterile water

text: USA:CA:San Diego

text: true

text: metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: empty control

text: metagenome

text: Time 3

text: Hygiene products and microbiome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: years

text: sample 8H12.Empty

text: TRUE

text: urban biome

text: research facility

text: misc environment

text: sterile water

text: USA:CA:San Diego

text: true

characteristic: longitude

text: metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: empty control

characteristic: sample type

text: metagenome

text: Time 3

characteristic: timepoint

characteristic: title

text: Hygiene products and microbiome


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Missing: Restricted access

characteristic: age

text: years

text: UBERON:skin

characteristic: body habitat

text: UBERON:sebum

characteristic: body product

text: UBERON:skin of foot

characteristic: body site

text: sample 8H2

text: TRUE

text: urban biome

text: human-associated habitat

characteristic: env feature

text: human-skin

characteristic: env package

text: sebum

text: USA:CA:San Diego

characteristic: geo loc name

text: true

text: Missing: Restricted access

characteristic: height or length

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

text: Volunteer 11

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

text: human skin metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: Foot

characteristic: sample site

text: skin

text: human skin metagenome

text: male

characteristic: sex

text: Volunteer 11

characteristic: subject

text: Time 3

text: Hygiene products and microbiome

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Restricted access

text: years

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of foot

text: sample 8H3

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

text: human-skin

text: sebum

text: USA:CA:San Diego

text: true

text: Missing: Restricted access

text: human

text: Homo sapiens

text: Volunteer 11

characteristic: longitude

text: human skin metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: Foot

text: skin

characteristic: sample type

text: human skin metagenome

text: male

text: Volunteer 11

text: Time 3

characteristic: timepoint

characteristic: title

text: Hygiene products and microbiome

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

text: Missing: Restricted access

characteristic: age

text: years

text: UBERON:skin

characteristic: body habitat

text: UBERON:sebum

characteristic: body product

text: UBERON:skin of foot

characteristic: body site

text: sample 8H4

text: TRUE

text: urban biome

text: human-associated habitat

characteristic: env feature

text: human-skin

characteristic: env package

text: sebum

text: USA:CA:San Diego

characteristic: geo loc name

text: true

text: Missing: Restricted access

characteristic: height or length

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

text: Volunteer 11

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

text: human skin metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: Foot

characteristic: sample site

text: skin

text: human skin metagenome

text: male

characteristic: sex

text: Volunteer 11

characteristic: subject

text: Time 3

text: Hygiene products and microbiome

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Missing: Restricted access

text: years

characteristic: age unit

characteristic: anonymized name

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of foot

text: sample 8H5

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: human-associated habitat

text: human-skin

text: sebum

text: USA:CA:San Diego

text: true

text: Missing: Restricted access

text: human

text: Homo sapiens

text: Volunteer 11

characteristic: longitude

text: human skin metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: Foot

text: skin

characteristic: sample type

text: human skin metagenome

text: male

text: Volunteer 11

text: Time 3

characteristic: timepoint

characteristic: title

text: Hygiene products and microbiome

text: Missing: Restricted access


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

text: years

text: sample 8H6.Empty

text: TRUE

text: urban biome

text: research facility

characteristic: env feature

text: misc environment

characteristic: env package

text: sterile water

text: USA:CA:San Diego

characteristic: geo loc name

text: true

characteristic: host subject id

characteristic: latitude

text: metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: empty control

text: metagenome

text: Time 3

text: Hygiene products and microbiome


text: UCSDMI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: years

characteristic: age unit

characteristic: anonymized name

text: sample 8H7.Empty

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

text: misc environment

text: sterile water

text: USA:CA:San Diego

text: true

text: metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: empty control

text: metagenome

text: Time 3

text: Hygiene products and microbiome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: years

text: sample 8H8.Empty

text: TRUE

text: urban biome

text: research facility

text: misc environment

text: sterile water

text: USA:CA:San Diego

text: true

characteristic: longitude

text: metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: empty control

characteristic: sample type

text: metagenome

text: Time 3

characteristic: timepoint

characteristic: title

text: Hygiene products and microbiome


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: years

text: sample 8H9.Empty

text: TRUE

text: urban biome

text: research facility

characteristic: env feature

text: misc environment

characteristic: env package

text: sterile water

text: USA:CA:San Diego

characteristic: geo loc name

text: true

characteristic: host subject id

characteristic: latitude

text: metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: empty control

text: metagenome

text: Time 3

text: Hygiene products and microbiome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

tag: Namespace:Department of Plant Biotechnology and Bioinformatics, Ghent University, Gent, Belgium VIB Center for Plant Systems Biology,VIB, Gent, Belgium

characteristic: Submitter Id

unit: day

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

characteristic: common name

text: Protocols: Collection of plant materials from in-vitro growing Arabidopsis plants. The leaf 3 was dissected from i > 250 individual seedlings per variant on a cooling plate under a stereomicroscope with precision needle and removed into the liquid nitrogen. DEX-inducible lines and wild-types were activated at 9 DAS by transfer of nylon meshes to half-strength MS medium supplemented with either 2.5 M DEX dissolved in 5x10-4% (v/v) DMSO or just 5x10-4% (v/v) DMSO. Poly(A)-containing mRNA molecules were reverse transcribed, double-stranded cDNA was generated and adapters were ligated. The total RNA was extracted according to a combined protocol of TRI Reagent RT (Molecular Research Center) and the RNeasy Kit (Qiagen) with on-column DNase (Qiagen) digestion. The TruSeq RNA Sample Preparation Kit version 2 (Illumina) was used for library preparation.

characteristic: description

text: seedling developmental stage

characteristic: developmental stage

characteristic: ecotype

characteristic: genotype

text: growth chamber study

characteristic: growth condition

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: organism part

text: dexamethasone-inducible expression of barley cytokinin oxidase/dehydrogenase

characteristic: phenotype

text: leaf 3

characteristic: sampling site

text: Arabidopsis thaliana

text: dexamethasone at 9 days after stratification

characteristic: stimulus


characteristic: ENA-CHECKLIST

text: Department of Plant Biotechnology and Bioinformatics, Ghent University, Gent, Belgium VIB Center for Plant Systems Biology,VIB, Gent, Belgium

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ArrayExpress

text: thale cress

text: seedling developmental stage

text: growth chamber study

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: rosette leaf

text: leaf 3

text: Arabidopsis thaliana

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

characteristic: common name

characteristic: description

text: seedling developmental stage

text: wild type genotype

text: growth chamber study

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: wild type phenotype

text: leaf 3

text: Arabidopsis thaliana


text: public

text: ArrayExpress

text: thale cress

text: seedling developmental stage

characteristic: developmental stage

characteristic: ecotype

characteristic: genotype

text: growth chamber study

characteristic: growth condition

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: organism part

text: dexamethasone-inducible expression of agrobacterial isopentenyl transferase

characteristic: phenotype

text: leaf 3

characteristic: sampling site

text: Arabidopsis thaliana

characteristic: stimulus


text: Anopheles gambiae

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: African malaria mosquito

text: Anopheles gambiae

characteristic: organism

text: Anopheles gambiae

characteristic: subject id

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

text: public

characteristic: Submitter Id

text: ANSES

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: France

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Yes

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Ruminant

characteristic: isolation source host associated

text: Salmonella enterica

text: Salmonella enterica

text: Monophasic variant of S. Typhimurium

characteristic: serovar

text: Source attribution


characteristic: ENA-CHECKLIST

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ANSES

text: No

text: France

text: Yes

text: Pig

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: S. Typhimurium

text: Source attribution


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

text: public

characteristic: Submitter Id

text: ANSES

characteristic: collected by

text: No

text: France

text: Yes

text: Pig

text: Salmonella enterica

text: Salmonella enterica

text: Monophasic variant of S. Typhimurium

text: Source attribution

characteristic: title


text: UNIVERSITY OF OXFORD

text: public

tag: Namespace:UNIVERSITY OF OXFORD

text: thale cress

characteristic: common name

text: Sanger sequence of mutation found in Atmsh2-1 MA line

characteristic: description

characteristic: ma line

text: Arabidopsis thaliana

characteristic: position

text: Arabidopsis thaliana

text: Leaves

characteristic: tissue type

text: DNA Mismatch Repair Preferentially Protects Genes from Mutation


Obesity2 Microbiota1

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

text: Obesity2 Microbiota1

tag: Namespace:INSTITUTO DE AGROQUIMICA Y TECNOLOGIA DE ALIMENTOS

characteristic: collection date

text: house mouse

text: 16S rDNA sequences from obesity2 experiment

text: Mouse

characteristic: environment (biome)

text: Mouse gastrointestinal tract

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: Spain

characteristic: geographic location (country and/or sea)

text: 39.4699° N

characteristic: geographic location (latitude)

text: 0.3763° W

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: Mus musculus

text: MyNewGut

characteristic: project name

text: Mus musculus

text: Illumina MiSeq

characteristic: sequencing method

text: Microbiota in obese mice


name: E-MTAB-6092:ambystoma mexicanum tissue pool

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Bioinformatics Core, Memorial Sloan Kettering Cancer Center

characteristic: Submitter Id

text: Mixed age (day 1 to 1.5 years)

characteristic: age

text: ArrayExpress

characteristic: broker name

text: axolotl

characteristic: common name

text: Protocols: Whole body tissue samples of Mexican axolotl salamanders (Ambystoma mexicanum) at the following developmental stages: 1. Embryo at the tail bud stage 2. Newly hatched larva 3. Larva at the limb bud stage 4. Juvenile at 8.5 centimeters 5. Adult were pooled Total RNA was isolated from tissue samples using variations of guanidinium-based protocols (MacLeod et. al., 1996; Chomczynski P and Sacchi N, 1987). All tissues were considered normal and careful efforts were in place to minimize any distortion of transcript levels caused by the collection procedure. RNA quantity, purity, and integrity of both the individual samples and the resulting pool were determined with an Agilent 2100 Bioanalyzer using the Eukaryotic Total RNA nano series II analysis kit. RNA was poly-A selected and used for Illumina random priming directional library prep using the Illumina mRNA-Seq Kit (Part #RS-100-0801).

characteristic: description

text: Mixed developmental stage

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: Ambystoma mexicanum

characteristic: organism

text: Ambystoma mexicanum

text: whole organism

characteristic: organism part

text: Ambystoma mexicanum

text: Mixed sex

characteristic: sex

text: Fresh specimen

characteristic: specimen with known storage state

text: ambystoma mexicanum tissue pool

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:Research Associate Faculty of Biology, Medicine and Health University of Manchester

text: ArrayExpress

text: mix of OE19, OE33 and HET1A cells

characteristic: cell line

text: epithelial cell

characteristic: cell type

text: human

text: Protocols: 1x10^6 cells of each cell type were plated into separate 100mm plates. OE19 and OE33 cells were grown in RPMI 1640 media (Gibco) supplemented with 10% FBS (Gibco). HET1A cells were grown in DMEM media (Gibco) supplemented with 10% FBS (Gibco). Cells were trypsinised 24 or 48 hours later and counted. An equal number of each cell type was mixed and resuspended in Dulbecco's PBS (Gibco). Lysis/ATAC steps was Incubated at 37 C for 1800 seconds 1. To dual-indexing the harvested libraries, combine the following in each well of a 96-well PCR plate: 10 L harvested library 10 L Nuclease Free H2O 2.5 L 25M Customized Nextera PCR Primer 1* [Barcode] 2.5 L 25M Customized Nextera PCR Primer 2* [Barcode] 25 L NEBNext High-Fidelity 2x PCR Master Mix (New England Labs Cat #M0541) 50 L Total. 2. Cycling as follows: (1) 72 C, 5 min (2) 98 C, 30 sec (3) 98 C, 10 sec (4) 72 C, 30 sec (5) 72C, 1 min (6) Repeat steps 3-5, 13x (7) Hold at 4C. 3. Pool the PCR products from the 96-well plate into a 15 mL conical tube. The final volume of the pooled library is ~4.8 mL. 4. Purify the pooled library using a single MinElute PCR purification column (Qiagen MinElute Kit). Elute the purified library in 20 L Elution Buffer (10mM Tris-HCl, pH 8). Be sure to dry the column before adding elution buffer.

text: mixed normal and esophageal carcinoma

text: filtered out

characteristic: inferred cell line

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens


text: Research Associate Faculty of Biology, Medicine and Health University of Manchester

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: mix of OE19, OE33 and HET1A cells

text: epithelial cell

text: human

characteristic: common name

characteristic: description

text: mixed normal and esophageal carcinoma

text: filtered out

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens


text: public

text: ArrayExpress

text: mix of OE19, OE33 and HET1A cells

text: epithelial cell

text: human

text: mixed normal and esophageal carcinoma

characteristic: disease

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Homo sapiens

characteristic: title


E-MTAB-5756_2:Sample 1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Helsinki.

text: public

text: E-MTAB-5756_2:Sample 1

tag: Namespace:University of Helsinki.

unit: year

characteristic: age

text: ArrayExpress

text: date palm

text: Protocols: Chamber was set to 20C during the light period, and 15C during the dark period (16 h/8 h; 70-3% rH at day and night). Light intensity was adjusted to photosynthetic active radiation (PAR) of 200-300 mmol photons m-2 s-1 at leaf level. KAPA Library Quantification Kit - Illumina/ABI Prism User Guide (Kapa Biosystems, Inc., Woburn, MA, USA) were used in library preparation and RNA sequencing.

text: seedling development stage

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: control

characteristic: growth condition

text: Phoenix dactylifera

text: Phoenix dactylifera

text: leaf

characteristic: organism part

text: Phoenix dactylifera

text: Sample 1


E-MTAB-5756_2:Sample 10

characteristic: External Id

text: University of Helsinki.

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5756_2:Sample 10

text: ArrayExpress

text: date palm

text: Protocols: Chamber was set to 35C during the light period, and 15C at during the dark period (60 8 % rH at day and 70 3% at night). Light intensity was adjusted to photosynthetic active radiation (PAR) of 200-300 mmol photons m-2 s-1 at leaf level. KAPA Library Quantification Kit - Illumina/ABI Prism User Guide (Kapa Biosystems, Inc., Woburn, MA, USA) were used in library preparation and RNA sequencing.

text: seedling development stage

text: wild type genotype

text: warm/hot temperature regimen

text: Phoenix dactylifera

text: Phoenix dactylifera

text: leaf

text: Phoenix dactylifera

text: Sample 10


E-MTAB-5756_2:Sample 11

text: University of Helsinki.

text: public

characteristic: SRA accession

text: E-MTAB-5756_2:Sample 11

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: date palm

characteristic: common name

characteristic: description

text: seedling development stage

text: wild type genotype

text: warm/hot temperature regimen

text: Phoenix dactylifera

text: Phoenix dactylifera

text: leaf

text: Phoenix dactylifera

text: Sample 11


E-MTAB-5756_2:Sample 12

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: University of Helsinki.

text: public

text: E-MTAB-5756_2:Sample 12

text: ArrayExpress

text: date palm

text: seedling development stage

text: wild type genotype

text: warm/hot temperature regimen

text: Phoenix dactylifera

characteristic: organism

text: Phoenix dactylifera

text: leaf

text: Phoenix dactylifera

text: Sample 12

characteristic: title


E-MTAB-5756_2:Sample 13

characteristic: ENA-LAST-UPDATE

text: University of Helsinki.

text: public

text: E-MTAB-5756_2:Sample 13

characteristic: age

text: ArrayExpress

text: date palm

text: Protocols: Irrigation of 35C grown plants was stopped for 5 days prior to sampling (15C during the dark period, 16h day/8h night). Light intensity was adjusted to photosynthetic active radiation (PAR) of 200-300 mmol photons m-2 s-1 at leaf level. KAPA Library Quantification Kit - Illumina/ABI Prism User Guide (Kapa Biosystems, Inc., Woburn, MA, USA) were used in library preparation and RNA sequencing.

text: seedling development stage

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: combined heat and drought

text: Phoenix dactylifera

text: Phoenix dactylifera

text: leaf

text: Phoenix dactylifera

text: Sample 13


E-MTAB-5756_2:Sample 14

characteristic: External Id

text: University of Helsinki.

characteristic: INSDC center name

text: public

text: E-MTAB-5756_2:Sample 14

text: ArrayExpress

text: date palm

text: seedling development stage

text: wild type genotype

text: combined heat and drought

characteristic: growth condition

text: Phoenix dactylifera

text: Phoenix dactylifera

text: leaf

characteristic: organism part

text: Phoenix dactylifera

text: Sample 14


E-MTAB-5756_2:Sample 15

text: University of Helsinki.

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5756_2:Sample 15

text: ArrayExpress

text: date palm

text: seedling development stage

text: wild type genotype

text: combined heat and drought

text: Phoenix dactylifera

text: Phoenix dactylifera

text: leaf

text: Phoenix dactylifera

text: Sample 15


E-MTAB-5756_2:Sample 16

text: University of Helsinki.

text: public

text: E-MTAB-5756_2:Sample 16

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: date palm

characteristic: common name

characteristic: description

text: seedling development stage

text: wild type genotype

text: combined heat and drought

text: Phoenix dactylifera

text: Phoenix dactylifera

text: leaf

text: Phoenix dactylifera

text: Sample 16


E-MTAB-5756_2:Sample 2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: University of Helsinki.

text: public

text: E-MTAB-5756_2:Sample 2

text: ArrayExpress

text: date palm

text: seedling development stage

text: wild type genotype

text: control

text: Phoenix dactylifera

characteristic: organism

text: Phoenix dactylifera

text: leaf

text: Phoenix dactylifera

text: Sample 2

characteristic: title


E-MTAB-5756_2:Sample 3

characteristic: ENA-LAST-UPDATE

text: University of Helsinki.

text: public

text: E-MTAB-5756_2:Sample 3

characteristic: age

text: ArrayExpress

text: date palm

text: seedling development stage

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: control

text: Phoenix dactylifera

text: Phoenix dactylifera

text: leaf

text: Phoenix dactylifera

text: Sample 3


E-MTAB-5756_2:Sample 4

characteristic: External Id

text: University of Helsinki.

characteristic: INSDC center name

text: public

text: E-MTAB-5756_2:Sample 4

text: ArrayExpress

text: date palm

text: seedling development stage

text: wild type genotype

text: control

characteristic: growth condition

text: Phoenix dactylifera

text: Phoenix dactylifera

text: leaf

characteristic: organism part

text: Phoenix dactylifera

text: Sample 4


E-MTAB-5756_2:Sample 5

text: University of Helsinki.

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5756_2:Sample 5

text: ArrayExpress

text: date palm

text: Protocols: Irrigation of 20C grown plants was stopped for 7-8 days prior to sampling (mild \drought\ conditions). Light intensity was adjusted to photosynthetic active radiation (PAR) of 200-300 mmol photons m-2 s-1 at leaf level. KAPA Library Quantification Kit - Illumina/ABI Prism User Guide (Kapa Biosystems, Inc., Woburn, MA, USA) were used in library preparation and RNA sequencing.

text: seedling development stage

text: wild type genotype

text: drought environment

text: Phoenix dactylifera

text: Phoenix dactylifera

text: leaf

text: Phoenix dactylifera

text: Sample 5


E-MTAB-5756_2:Sample 6

text: University of Helsinki.

text: public

text: E-MTAB-5756_2:Sample 6

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: date palm

characteristic: common name

characteristic: description

text: seedling development stage

text: wild type genotype

text: drought environment

text: Phoenix dactylifera

text: Phoenix dactylifera

text: leaf

text: Phoenix dactylifera

text: Sample 6


E-MTAB-5756_2:Sample 7

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: University of Helsinki.

text: public

text: E-MTAB-5756_2:Sample 7

text: ArrayExpress

text: date palm

text: seedling development stage

text: wild type genotype

text: drought environment

text: Phoenix dactylifera

characteristic: organism

text: Phoenix dactylifera

text: leaf

text: Phoenix dactylifera

text: Sample 7

characteristic: title


E-MTAB-5756_2:Sample 8

characteristic: ENA-LAST-UPDATE

text: University of Helsinki.

text: public

text: E-MTAB-5756_2:Sample 8

characteristic: age

text: ArrayExpress

text: date palm

text: seedling development stage

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: drought environment

text: Phoenix dactylifera

text: Phoenix dactylifera

text: leaf

text: Phoenix dactylifera

text: Sample 8


E-MTAB-5756_2:Sample 9

characteristic: External Id

text: University of Helsinki.

characteristic: INSDC center name

text: public

text: E-MTAB-5756_2:Sample 9

text: ArrayExpress

text: date palm

text: seedling development stage

text: wild type genotype

text: warm/hot temperature regimen

characteristic: growth condition

text: Phoenix dactylifera

text: Phoenix dactylifera

text: leaf

characteristic: organism part

text: Phoenix dactylifera

text: Sample 9


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Philipps-University Marburg, Institute for Medical Microbiology and Hygiene

text: 8 to 12

unit: week

text: ArrayExpress

text: CD4-positive, alpha-beta T cell

characteristic: cell type

text: house mouse

text: Protocols: Spleen and lymphnodes were isolated from FIR/ TIGER mice on C57/Bl6 Background (IL-10/ GFP - Foxp3/ RFP -reporter mouse). Cells were homogenized with 30 M cell strainers, CD4 T cells were isolated using Magnet-associated cell sorting (negative selection) to a purity of over 90% A 48-well plate was coated with Anti-CD3-Ab (5 g/ml) overnight the day before; cells were cultured in RPMI complete (500000 cells/ well in 500 L) conditioned with plate-bound Anti-CD3-antibody, IL-2, IL-23, IL-1beta, Anti-IL-4-Antibody, Anti-IFN-gamma-Antibody and Anti-CD28-Antibody in presence or absence (control) of 4 mM pentanoate (valeric acid) for 3 days at 37C, 5% CO2 saturation and 95% humidity. Cells were harvested on day 3 and RNA was isolated Cells were harvested and washed in PBS, RNA-isolation was performed according to the protocol of the Qiagen RNeasy Mini Kit (Qiagen) incl. DNase digestion RNASeq libraries were prepared using a TruSeq Stranded mRNA Sample Prep kit (Illumina, Tokyo, Japan).

text: normal

characteristic: disease

text: IL-10/GFP; Foxp3/RFP

text: Mus musculus

text: Mus musculus

text: mixed spleen and lymph node

characteristic: replicate

text: Mus musculus

text: female

characteristic: sex

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Philipps-University Marburg, Institute for Medical Microbiology and Hygiene

text: public

characteristic: Submitter Id

text: 8 to 12

text: ArrayExpress

characteristic: broker name

text: CD4-positive, alpha-beta T cell

text: house mouse

characteristic: common name

characteristic: description

text: normal

text: IL-10/GFP; Foxp3/RFP

text: Mus musculus

characteristic: organism

text: Mus musculus

text: mixed spleen and lymph node

text: Mus musculus

text: female

characteristic: title


characteristic: External Id

text: OIST Graduate University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:OIST Graduate University

text: 2.5 to 2.6

unit: hour

characteristic: age

text: ArrayExpress

text: Protocols: Ciona intestinalis type A, recently designated Ciona robusta, adults were obtained from Maizuru Fisheries Research Station (Kyoto University) and Misaki Marine Biological station (The University of Tokyo) under the National Bio-Resource Project for Ciona. They were maintained in aquarium in our laboratory at Okinawa Institute of Science and Technology Graduate University under constant light (Calcitrans, Nisshin Marinetech Co., Ltd.) for three days apart from a few hours of darkness a day with feeding to induce spawning of the old eggs. After this, the Ciona were maintained under constant light to induce oocyte maturation. Eggs and sperm were obtained surgically from the gonoducts. Embryos were dechorionated after insemination using a solution of 0.07% actinase and 1.3% sodium thioglycolate. Eggs were reared to reach the 16-cell stage in Millipore-filtered seawater (MFSW) at about 18 °C. Embryos from each insemination batch were kept to check the ratio that developed into morphologically normal tailbud. We only used embryos from batches where more than 70% developed normally to tailbud (10 hours post fertilization at 18 degrees). At a defined point in development of the 16-cell embryo i.e., at the stage immediately after compaction of the embryo (2.5 ~ 2.6 hours post fertilization), the embryo was transferred to 4°C to slow its development. Each blastomere was isolated with a fine glass needle in a mannitol solution (0.77 M mannitol : MFSW, 9:1) under a stereo microscope at 4 °C regulated by a thermo plate (Tokai Hit Co., Ltd.) and its identity noted. Isolated blastomeres were picked up and transferred immediately with a mouth pipet into a lysis buffer for reverse transcription. We followed the single-cell library preparation method of Tang et al (2009,2010) with some modification. We added ERCC spike-in RNA (Thermo Fisher scientific, 4456740, 1:80000) to each lysis buffer and applied 14 and then 9 cycles of PCR amplification after second strand synthesis. Amplified cDNA was purified with MinElute PCR Purification kit (28006, QIAGEN) and QIAquick PCR Purification Kit (28106, QIAGEN) after each PCR reaction respectively and its concentration measured with Qubit® 2.0 Fluorometer (Q32866, Life Technologies) to have more than 150 ng total yield of cDNA. The quality of the amplified cDNA and distribution of DNA fragment size were confirmed by Agilent 2100 Bioanalyzer (Agilent Technologies) with High Sensitivity DNA Kit (5067-4626, Agilent) to consist mainly of 1.0-1.5 kb fragments. Amplified cDNAs were sheared using sonication Covaris S2 System to produce DNA of 300 bp on average. The settings were as follows: Duty cycle: 20%, Intensity: 5, Cycles per burst: 200, Power mode - Frequency sweeping, Treatment time: 90 seconds, Temperature: 12°C. NEB Next® ChIP-Seq Library Prep Master Mix Set for Illumina® (E6240, NEB) was applied to sheared cDNA for preparation of the library for the Illumina platform. NEBNext® Multiplex Oligos for Illumina (E7335, E7500, NEB Next Multiplex Oligos for Illumina, NEB) were combined to introduce an index and adaptor to the double-stranded DNA. After extraction of the 300 bp fraction of adaptor-ligated DNA by E-Gel Size Select 2% Agarose (G661002, Invitrogen), DNA was amplified with individual index primers using PCR with 19 cycles. The amplified DNA fragment composition was purified with Agencourt AMPure XP twice (A63881, Beckman) and again checked by Qubit (> 60 ng of cDNA in total yield) and by Bioanalyzer to ensure that the fragment size was sharply distributed around 300 bp (on average, about 320 bp with a standard deviation of 40). The concentration of fragments with appropriate index adapters was quantified by KAPA Library Quantification Kits (KAPA Library Quantification Kits, Illumina GA/Universal, KK4825, Genetics) to ensure that the final libraries had adapters for both ends and their concentration was at least 20 pM.

text: cleavage 16-cell

characteristic: developmental stage

characteristic: individual

text: Ciona robusta

text: Ciona robusta

text: right half of the embryo

characteristic: sampling site

text: Ciona robusta


text: Brucella abortus A13334

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Brucella abortus A13334

text: Brucella abortus A13334

text: Brucella abortus A13334

characteristic: subject id

text: Brucella abortus A13334


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-6115:murine_B_cells_CpG_and_Pentanoate_treated-1

characteristic: Submitter Id

text: 8 to 12

text: ArrayExpress

characteristic: broker name

text: B cell

characteristic: cell type

text: house mouse

characteristic: common name

text: Protocols: The spleen was isolated from FIR/TIGER mice on C57/Bl6 Background (IL-10 (GFP) - Foxp3 (RFP) - reporter mouse). Cells were homogenized with 30 µM cell strainers, B220 positive B cells were isolated using Magnet-associated cell sorting (negative selection) to a purity of over 90% Fresh B cells were either used for RNA isolation directly (murine_B_cells_fresh_control) or treated with 5 µg/ml CpG 2395 for culturing. Cells were cultured in RPMI complete (500000 cells/ well in 500 µL) conditioned with CpG 2395 (5 µg/ml). 24 h after stimulation with CpG 2395 the cells were incubated in presence (murine_B_cells_CpG_and_Pentanoate_treated) or absence (murine_B_cells_CpG_treated) of 5 mM pentanoate (valeric acid) for 4 days at 37°C, 5% CO2 saturation and 95% humidity. Cells were harvested and washed in PBS, RNA-isolation was performed according to the protocol of the Qiagen RNeasy Mini Kit (Qiagen) incl. DNase treatment RNASeq libraries were prepared using a TruSeq Stranded mRNA Sample Prep kit (Illumina, Tokyo, Japan).

text: normal

characteristic: disease

text: IL-10/GFP; Foxp3/RFP

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: spleen

characteristic: organism part

characteristic: replicate

text: Mus musculus

text: female

characteristic: sex

characteristic: strain


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-6115:murine_B_cells_CpG_and_Pentanoate_treated-2

text: 8 to 12

characteristic: age

text: ArrayExpress

text: B cell

text: house mouse

characteristic: description

text: normal

text: IL-10/GFP; Foxp3/RFP

text: Mus musculus

characteristic: organism

text: Mus musculus

text: spleen

text: Mus musculus

text: female

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6115:murine_B_cells_CpG_and_Pentanoate_treated-3

characteristic: Submitter Id

text: 8 to 12

text: ArrayExpress

characteristic: broker name

text: B cell

text: house mouse

text: normal

text: IL-10/GFP; Foxp3/RFP

text: Mus musculus

text: Mus musculus

text: spleen

text: Mus musculus

text: female


text: public

text: E-MTAB-6115:murine_B_cells_CpG_treated-1

text: 8 to 12

text: ArrayExpress

text: B cell

characteristic: cell type

text: house mouse

characteristic: common name

text: normal

characteristic: disease

text: IL-10/GFP; Foxp3/RFP

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: spleen

characteristic: organism part

characteristic: replicate

text: Mus musculus

text: female

characteristic: sex


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-6115:murine_B_cells_CpG_treated-2

text: 8 to 12

characteristic: age

text: ArrayExpress

text: B cell

text: house mouse

characteristic: description

text: normal

text: IL-10/GFP; Foxp3/RFP

text: Mus musculus

text: Mus musculus

text: spleen

text: Mus musculus

text: female

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6115:murine_B_cells_CpG_treated-3

text: 8 to 12

text: ArrayExpress

text: B cell

text: house mouse

text: normal

text: IL-10/GFP; Foxp3/RFP

text: Mus musculus

characteristic: organism

text: Mus musculus

text: spleen

text: Mus musculus

text: female

characteristic: title


text: public

text: E-MTAB-6115:murine_B_cells_fresh_control-1

characteristic: Submitter Id

text: 8 to 12

text: ArrayExpress

characteristic: broker name

text: B cell

characteristic: cell type

text: house mouse

characteristic: common name

text: normal

characteristic: disease

text: IL-10/GFP; Foxp3/RFP

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: spleen

characteristic: organism part

text: Mus musculus

text: female


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-6115:murine_B_cells_fresh_control-2

text: 8 to 12

characteristic: age

text: ArrayExpress

text: B cell

text: house mouse

text: normal

text: IL-10/GFP; Foxp3/RFP

text: Mus musculus

text: Mus musculus

text: spleen

characteristic: replicate

text: Mus musculus

text: female

characteristic: sex


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6115:murine_B_cells_fresh_control-3

text: 8 to 12

text: ArrayExpress

text: B cell

text: house mouse

characteristic: description

text: normal

text: IL-10/GFP; Foxp3/RFP

text: Mus musculus

text: Mus musculus

text: spleen

text: Mus musculus

text: female

characteristic: strain


text: Acinetobacter calcoaceticus

characteristic: ArrayExpress-SPECIES

text: SC

text: public

characteristic: Submitter Id

text: Acinetobacter calcoaceticus

characteristic: common name

text: Acinetobacter calcoaceticus

characteristic: organism

text: Acinetobacter calcoaceticus

characteristic: subject id

characteristic: title


text: Aeromonas hydrophila

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Aeromonas hydrophila

text: Aeromonas hydrophila

text: Aeromonas hydrophila


text: Alcaligenes faecalis

characteristic: ENA-CHECKLIST

text: SC

text: public

text: Alcaligenes faecalis

text: Alcaligenes faecalis

text: Alcaligenes faecalis


text: Lactococcus lactis subsp. lactis

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: Lactococcus lactis subsp. lactis

text: Lactococcus lactis subsp. lactis

text: Lactococcus lactis subsp. lactis


text: Citrobacter freundii

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: Citrobacter freundii

text: Citrobacter freundii

text: Citrobacter freundii


text: Chromobacterium violaceum

text: SC

text: public

characteristic: INSDC status

text: Chromobacterium violaceum

text: Chromobacterium violaceum

text: Chromobacterium violaceum


text: Fluoribacter bozemanae

text: SC

text: public

characteristic: SRA accession

text: Fluoribacter bozemanae

text: Fluoribacter bozemanae

text: Fluoribacter bozemanae


text: Edwardsiella tarda

text: SC

text: public

text: Edwardsiella tarda

text: Edwardsiella tarda

text: Edwardsiella tarda


text: Micrococcus luteus

text: SC

text: public

text: Micrococcus luteus

text: Micrococcus luteus

text: Micrococcus luteus


text: Kocuria varians

text: SC

text: public

text: Kocuria varians

text: Kocuria varians

text: Kocuria varians


text: Clostridioides difficile

text: SC

text: public

text: Clostridioides difficile

text: Clostridioides difficile

text: Clostridioides difficile


text: Streptococcus pneumoniae

text: SC

text: public

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae


text: Bordetella pertussis

text: SC

text: public

text: Bordetella pertussis

text: Bordetella pertussis

text: Bordetella pertussis


text: Propionibacterium acidifaciens

text: SC

text: public

text: Propionibacterium acidifaciens

text: Propionibacterium acidifaciens

text: Propionibacterium acidifaciens


text: ABERSYTWYTH UNIVERSITY

text: public

tag: Namespace:ABERSYTWYTH UNIVERSITY

characteristic: collection date

text: sheep

text: In vitro response to control in sheep. s1Co

characteristic: description

text: Rumen

characteristic: environment (biome)

text: Rumen fluid

characteristic: environment (feature)

text: fluid

characteristic: environment (material)

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Rumen

characteristic: host body habitat

text: Sheep

characteristic: host common name

text: 50:50 F:C

characteristic: host diet

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: Ovis aries

text: PUFAmicro

characteristic: project name

text: Ovis aries

text: Ion torrent

characteristic: sequencing method

text: PUFAmicro