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text: cgtatcgcctccctcgcgccatcag

characteristic: adaptor sequence

text: Dfc, Boreal cool summer

characteristic: collection date

text: pyrotag library

characteristic: common name

text: forest

text: forest

text: soil

text: soil

text: Canada

characteristic: geographic location (country and/or sea)

text: mimarks-survey

characteristic: investigation type

text: ATCTACTGAC

text: soil metagenome

text: acgggcggtgtgtRc

text: Skulow Lake Genomic Survey

characteristic: project name

text: soil metagenome

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: Orthic Gray Luvisols

text: 16S rRNA

text: Lodgepole pine, Interior spruce


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Cornell University

text: public

text: cgtatcgcctccctcgcgccatcag

text: Dfc, Boreal cool summer

text: pyrotag library

text: forest

characteristic: environment (biome)

text: forest

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: soil

characteristic: environmental package

text: Canada

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: harvesting treatment

text: mimarks-survey

text: CACGTAGATC

characteristic: multiplex identifiers

text: soil metagenome

characteristic: organism

text: acgggcggtgtgtRc

characteristic: pcr primers

text: Skulow Lake Genomic Survey

characteristic: sample weight for DNA extraction

text: soil metagenome

text: soil

text: Orthic Gray Luvisols

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: title

text: Lodgepole pine, Interior spruce


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Cornell University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: cgtatcgcctccctcgcgccatcag

characteristic: adaptor sequence

text: Dfc, Boreal cool summer

characteristic: collection date

text: pyrotag library

characteristic: common name

text: forest

text: forest

text: soil

text: soil

text: Canada

characteristic: geographic location (country and/or sea)

text: mimarks-survey

characteristic: investigation type

text: CACGTGTCGC

text: soil metagenome

text: acgggcggtgtgtRc

text: Skulow Lake Genomic Survey

characteristic: project name

text: soil metagenome

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: Orthic Gray Luvisols

text: 16S rRNA

text: Lodgepole pine, Interior spruce


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Cornell University

text: public

text: cgtatcgcctccctcgcgccatcag

text: Dfc, Boreal cool summer

text: pyrotag library

text: forest

characteristic: environment (biome)

text: forest

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: soil

characteristic: environmental package

text: Canada

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: harvesting treatment

text: mimarks-survey

text: CATACTCTAC

characteristic: multiplex identifiers

text: soil metagenome

characteristic: organism

text: acgggcggtgtgtRc

characteristic: pcr primers

text: Skulow Lake Genomic Survey

characteristic: sample weight for DNA extraction

text: soil metagenome

text: soil

text: Orthic Gray Luvisols

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: title

text: Lodgepole pine, Interior spruce


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Cornell University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: cgtatcgcctccctcgcgccatcag

characteristic: adaptor sequence

text: Dfc, Boreal cool summer

characteristic: collection date

text: pyrotag library

characteristic: common name

text: forest

text: forest

text: soil

text: soil

text: Canada

characteristic: geographic location (country and/or sea)

text: mimarks-survey

characteristic: investigation type

text: CGACACTATC

text: soil metagenome

text: acgggcggtgtgtRc

text: Skulow Lake Genomic Survey

characteristic: project name

text: soil metagenome

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: Orthic Gray Luvisols

text: 16S rRNA

text: Lodgepole pine, Interior spruce


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Cornell University

text: public

text: cgtatcgcctccctcgcgccatcag

text: Dfc, Boreal cool summer

text: pyrotag library

text: forest

characteristic: environment (biome)

text: forest

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: soil

characteristic: environmental package

text: Canada

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: harvesting treatment

text: mimarks-survey

text: CGAGACGCGC

characteristic: multiplex identifiers

text: soil metagenome

characteristic: organism

text: acgggcggtgtgtRc

characteristic: pcr primers

text: Skulow Lake Genomic Survey

characteristic: sample weight for DNA extraction

text: soil metagenome

text: soil

text: Orthic Gray Luvisols

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: title

text: Lodgepole pine, Interior spruce


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Cornell University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: cgtatcgcctccctcgcgccatcag

characteristic: adaptor sequence

text: Dfc, Boreal cool summer

characteristic: collection date

text: pyrotag library

characteristic: common name

text: forest

text: forest

text: soil

text: soil

text: Canada

characteristic: geographic location (country and/or sea)

text: mimarks-survey

characteristic: investigation type

text: CGTATGCGAC

text: soil metagenome

text: acgggcggtgtgtRc

text: Skulow Lake Genomic Survey

characteristic: project name

text: soil metagenome

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: Orthic Gray Luvisols

text: 16S rRNA

text: Lodgepole pine, Interior spruce


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Faculty of medecine and pharmacy RABAT

text: public

tag: Namespace:Faculty of medecine and pharmacy RABAT

text: Jean Uwingabiye and Mostafa Elouennass.

characteristic: collected by

text: Whole Genome Sequence of a Multidrug-Resistant Acinetobacter baumannii Strain ABE12_M Isolated from a Moroccan Hospital Floor

characteristic: description

text: Morocco

text: Hospital Floor

characteristic: isolation source

text: Acinetobacter baumannii

characteristic: organism

text: Acinetobacter baumannii

characteristic: strain

text: Whole Genome Sequence of Acinetobacter baumannii Strain ABE12_M Isolated from Morocco

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Faculty of medecine and pharmacy RABAT

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Jean Uwingabiye and Mostafa Elouennass.

text: Whole Genome Sequence of a Multidrug-Resistant Acinetobacter baumannii Strain Isolated from a Moroccan Hospital Floor.

text: Morocco

text: Hospital Floor

text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: Whole Genome Sequence of a Multidrug-Resistant Acinetobacter baumannii Strain ABE8_07 Isolated from Morocco


text: Department of Biosecurity PCL3

text: public

tag: Namespace:Department of Biosecurity PCL3

characteristic: collection date

text: Morocco

characteristic: geographic location (country and/or sea)

text: non applicable

characteristic: host scientific name

text: urin

characteristic: isolate

text: homo sapien

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis DBS2


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: INSTITUTE OF CANCER RESEARCH

text: public

tag: Namespace:INSTITUTE OF CANCER RESEARCH

text: human

characteristic: common name

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: tumour

characteristic: tissue type

text: GastricStudy


characteristic: ENA-LAST-UPDATE

text: SDAU, Sardarkrushinagar

text: public

tag: Namespace:SDAU, Sardarkrushinagar

text: deep litter system flock C healthy broiler

text: host associated

characteristic: environment (biome)

text: respiratory tract

characteristic: environment (feature)

text: TBA (Tracheo-Broncho-Alveolar) lavage

characteristic: environment (material)

text: India

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: bird metagenome

characteristic: organism

text: Respiratory disease complex

characteristic: project name

text: bird metagenome

text: semiconduction

characteristic: sequencing method

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: SDAU, Sardarkrushinagar

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: deep litter system flock C healthy

text: host associated

text: trachea

text: lavage

text: India

characteristic: geographic location (country and/or sea)

text: host-associated

text: metagenome

text: bird metagenome

text: Respiratory disease complex

text: bird metagenome

text: semiconduction


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: ZHE JIANG UNIVERSITY

text: public

tag: Namespace:ZHE JIANG UNIVERSITY

text: sheep

characteristic: common name

text: Hu sheep

characteristic: environment (biome)

text: Rumen

characteristic: environment (feature)

text: content

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

text: metagenome

text: Ovis aries

text: rumen content bacteria of Hu lambs during early age

text: Ovis aries

text: Illumina Hiseq PE250

text: rumen content bacteria


characteristic: ENA-CHECKLIST

characteristic: External Id

text: INRA

text: public

text: red junglefowl-Dataset1-forward Miseq reads : 250 nucleotides

characteristic: description

text: Gallus gallus bankiva

characteristic: organism

text: Gallus gallus bankiva

text: blood red cells

characteristic: tissue type

characteristic: title


text: INRA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: red junglefowl-Dataset1-reverse Miseq reads: 250 nucleotides in length

text: Gallus gallus bankiva

text: Gallus gallus bankiva

text: blood red cells

text: red junglefowl-Dataset1-revese Miseq reads


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: INRA

text: public

text: red junglefowl-Dataset2-forward Miseq reads: 250 nucleotides

text: Gallus gallus bankiva

text: Gallus gallus bankiva

text: blood red cell


text: INRA

text: public

text: red junglefowl-Dataset2-reverse Miseq reads: 250 nucleotides

text: Gallus gallus bankiva

text: Gallus gallus bankiva

text: blood red cells


text: INRA

text: public

text: red junglefowl-Dataset3-forward Miseq reads: 75 nucleotides

text: Gallus gallus bankiva

text: Gallus gallus bankiva

text: blood red cells


text: INRA

text: public

text: red junglefowl-Dataset3-reverse Miseq reads: 75 nucleotides

text: Gallus gallus bankiva

text: Gallus gallus bankiva

text: blood red cells


text: INRA

text: public

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens


text: public

tag: Namespace:TELETHON INSTITUTE OF GENETICS AND MEDICINE, TIGEM

text: house mouse

text: Mus musculus

text: Mus musculus

text: ESC wt


text: TELETHON INSTITUTE OF GENETICS AND MEDICINE, TIGEM

text: public

text: house mouse

text: E14 wild type indifferenziate (ESC)/dupl. Biol.di A9

text: Mus musculus

text: Mus musculus

text: ESC wt


text: public

text: house mouse

text: Otx2-/- (GFP/LacZ) indifferenziate (ESC)

text: Mus musculus

text: Mus musculus

text: Otx2-/- ESC


text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: Otx2-/- ESC


text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: Cells


text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: epiSC


text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: EpiSC


text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: ESC WT


text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus


text: DKFZ-SFG

text: public

characteristic: StrainOrLine

text: E-MTAB-315:fireflyLuciferase_biolRep2_techRep2

text: ArrayExpress

characteristic: broker name

text: fruit fly

text: Protocols: S2 cells adjusted to growth in serum-free media (D.Mel-2, Invitrogen, Carlsbad, CA) were grown in Express Five SFM (Invitrogen, Carlsbad, CA) supplemented with 20 mM Glutamax I, 100 U/ml penicillin, 100 microgram/ml streptomycin. RNAi knockdown was performed by seeding 0.75 Mio cells in 1.5 ml Express-5 medium containing 20 microgram dsRNA and 8 microliter 0.4 mg/ml dimethyldioctadecylammonium bromide (DDAB) per well of a 6-well plate. Cells were incubated at 25 degr. C for 5 days and harvested by centrifugation at 1500xg for 5 min. Total RNA was extracted using Trizol (Invitrogen, Carlsbad, CA), followed by Rneasy cleanup (Qiagen, Hilden, Germany) including on-column DNAse digest. RNA integrity was verified on an Agient 2100 Bioanalyzer. mRNA was isolated with the Dynabeads mRNA DIRECT Kit (Invitrogen, Carlsbad,CA). For each sample, a library for SOLiD sequencing was prepared with the 'Whole transcriptome analysis kit' (4409491 Rev. D, Invitrogen, Carlsbad,CA). Briefly, polyA RNA was fragmented using RNAseIII, purified, hybridized and ligated to RNA adapters. Ligation products were reverse transcribed, purified and ca. 200 nt cDNA fragments selected after electrophoresis on a 6% TBE-Urea gel. cDNA was PCR amplified with SOLiD sequencing primers and purified to produce a library suitable as a template for emulsion PCR. DNA concentrations were determined using qPCR and a pooled library was generated by combining equimolar amounts from all samples.

text: Drosophila melanogaster

text: Drosophila melanogaster

text: Drosophila melanogaster


text: DKFZ-SFG

text: public

text: ArrayExpress

text: fruit fly

text: Drosophila melanogaster

text: Drosophila melanogaster

text: Drosophila melanogaster


text: DKFZ-SFG

text: public

text: E-MTAB-315:fireflyLuciferase_biolRep1_techRep2

text: ArrayExpress

text: fruit fly

text: Drosophila melanogaster

text: Drosophila melanogaster

text: Drosophila melanogaster


text: DKFZ-SFG

text: public

text: E-MTAB-315:fireflyLuciferase_biolRep2_techRep1

text: ArrayExpress

text: fruit fly

text: Drosophila melanogaster

text: Drosophila melanogaster

text: Drosophila melanogaster


text: DKFZ-SFG

text: public

text: E-MTAB-315:fireflyLuciferase_biolRep1_techRep1

text: ArrayExpress

text: fruit fly

text: Drosophila melanogaster

text: Drosophila melanogaster

text: Drosophila melanogaster


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Danio rerio

text: Tu

characteristic: strain


characteristic: External Id

text: SC

text: public

text: malaria parasite P. falciparum

text: Plasmodium falciparum

text: Plasmodium falciparum


text: SC

text: public

text: malaria parasite P. falciparum

text: Plasmodium falciparum

text: Plasmodium falciparum


text: UU

text: public

text: human

text: ChIP DNA for FOXA1 in human liver cell line HepG2

characteristic: description

text: Homo sapiens

text: Homo sapiens


Input

text: UU

text: public

text: Input

text: human

text: HepG2 input DNA generated in the ChIP assay

text: Homo sapiens

characteristic: organism

text: Homo sapiens


text: UU

text: public

text: human

text: ChIP DNA for FOXA3 in human liver cell line HepG2

text: Homo sapiens

text: Homo sapiens


text: UU

text: public

text: human

text: ChIP DNA for histone 3 lysine 4 tri-methylation in human liver cell line HepG2

text: Homo sapiens

text: Homo sapiens


text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus


text: SC

text: public

text: pig

text: Sus scrofa

text: Sus scrofa


text: LGTF

text: public

text: ATTC & Coriell Inst. Medical Res.

characteristic: biosourceprovider

text: ArrayExpress

text: human

text: Protocols: RNA from human cell lines was isolated by a modified guanidium thiocynate methods followed by polyA+ RNA selection with two rounds of oligo(dT)-cellulose columns. Selected targets were then amplified by RT-PCR.

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: female

characteristic: sex


text: CRI

characteristic: INSDC center name

text: public

text: E-MTAB-530:iCLIP_TDP-43_Brain_High_LUjt4_NNCGNNCGA

text: ArrayExpress

text: cognitively normal

characteristic: clinical history

text: human

text: Protocols: SHSY5Y cells were grown in 10 cm2 plates. iCLIP of TDP-43 proteins, RNA ligated to L3 linker, extracted and self-circularised. The final products were obtained by PCR with Illumina sequencing primers. Specific barcodes were used for each RT reaction, and are specified below for each sequencing run. Random barcodes are also incorperated to distinguish between PCR duplication and different cDNA products.

text: Homo sapiens

text: Homo sapiens

text: medium temporal gyrus

characteristic: organism part

text: Homo sapiens

text: female

characteristic: title


text: CRI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-530:iCLIP_TDP-43_Embryonic-Stem-Cells_LUjt3_GANNN

text: ArrayExpress

characteristic: cell line

text: embryonic stem cells

characteristic: cell type

text: human

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: female


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CRI

text: public

text: E-MTAB-530:iCLIP_TDP-43_SH-SY5Y_High_LUjt4_NNCGNNAAA

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: SH-SY5Y neuroblastoma cells

text: neuroblast

text: human

characteristic: common name

text: neuroblastoma

characteristic: disease state

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: female


characteristic: External Id

text: CRI

text: public

text: E-MTAB-530:iCLIP_TDP-43_SH-SY5Y_Low_LUjt5_NNCGNNAAA

text: ArrayExpress

text: SH-SY5Y neuroblastoma cells

text: neuroblast

text: human

characteristic: description

text: neuroblastoma

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Homo sapiens

text: female

characteristic: sex


text: CRI

characteristic: INSDC center name

text: public

text: E-MTAB-530:iCLIP_TDP-43_SH-SY5Y_LUjt3_CANNN

text: ArrayExpress

text: SH-SY5Y neuroblastoma cells

text: neuroblast

text: human

text: neuroblastoma

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: female

characteristic: title


text: CRI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-530:iCLIP_TDP-43_SH-SY5Y_Cytoplasmic_LUjt8_NNNCAATNN

text: ArrayExpress

text: SH-SY5Y neuroblastoma cells

text: neuroblast

text: human

text: neuroblastoma

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: female


text: CRI

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-530:iCLIP_TDP-43_Brain-F20_LUjt1_CANNN

text: ArrayExpress

text: frontotemporal lobar degeneration

characteristic: clinical history

text: human

text: Homo sapiens

text: Homo sapiens

text: medium temporal gyrus

characteristic: organism part

text: Homo sapiens

text: male


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CRI

text: public

text: E-MTAB-530:iCLIP_TDP-43_Brain-C25__LUe5_TGNNN

text: ArrayExpress

text: cognitively normal

text: human

text: Homo sapiens

text: Homo sapiens

text: medium temporal gyrus

text: Homo sapiens

text: male


text: CRI

text: public

text: E-MTAB-530:iCLIP_TDP-43_Brain-C30_LUjt1_TGNNN

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: cognitively normal

text: human

text: Homo sapiens

text: Homo sapiens

text: medium temporal gyrus

text: Homo sapiens

text: male


text: CRI

text: public

text: E-MTAB-530:iCLIP_TDP-43_Brain-F21_LUjt1_GANNN

text: ArrayExpress

text: frontotemporal lobar degeneration

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: medium temporal gyrus

text: Homo sapiens

text: female


characteristic: External Id

text: CRI

text: public

text: E-MTAB-530:iCLIP_TDP-43_Brain-F24_LUjt2_TGNNN

text: ArrayExpress

text: frontotemporal lobar degeneration

text: human

text: Homo sapiens

text: Homo sapiens

text: medium temporal gyrus

text: Homo sapiens

text: male


text: CRI

text: public

text: E-MTAB-530:iCLIP_TDP-43_SH-SY5Y_Total_LUjt8_NNNGGTTNN

text: ArrayExpress

text: SH-SY5Y neuroblastoma cells

characteristic: cell line

text: neuroblast

characteristic: cell type

text: human

characteristic: description

text: neuroblastoma

characteristic: disease state

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: female


text: CRI

characteristic: INSDC center name

text: public

text: E-MTAB-530:iCLIP_TDP-43_SH-SY5Y_Nuclear_LUjt8_NNNTTGTNN

text: ArrayExpress

text: SH-SY5Y neuroblastoma cells

text: neuroblast

text: human

text: neuroblastoma

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Homo sapiens

text: female

characteristic: sex

characteristic: title


text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: dwarf danio

text: Danio nigrofasciatus

text: Danio nigrofasciatus


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: house mouse

text: Mus musculus

text: genomic mouse DNA from lcc homozygous mutant

characteristic: sample description

text: Mus musculus


TAChineseSpring

text: flow sorted chromosomes

characteristic: DNA source

text: IPK-Gatersleben

text: public

text: TAChineseSpring

characteristic: Submitter Id

text: GABIPD

characteristic: broker name

text: bread wheat

characteristic: common name

text: Chinese Spring

characteristic: cultivar

text: Chinese Spring

characteristic: genotype

text: Triticum aestivum

text: Triticum aestivum

text: Triticum aestivum cv Chinese Spring


characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: Tasmanian devil

text: Sarcophilus harrisii

text: Sarcophilus harrisii


text: SC

text: public

text: dog

text: Canis lupus familiaris

characteristic: organism

text: Canis lupus familiaris


text: BGI

text: public

text: two weeks

characteristic: age

text: root

characteristic: bio source type

text: seedling

characteristic: biosourceprovider

text: ArrayExpress

text: rice

text: Protocols: Uniucleate microspores (UNMs) were released from tetrad, bicellular pollen (BCP) was stage before PMII and after PMI, and tricellular pollen (TCP) was after PMII but before dehydroded; roots and leaves were from two-weeks seedling and callus cells were one-month. The anther at UNM and TCP stage was crached gently in 0.4 M mannitol at 4 degree C, after removing the anther wall and fragment, the UNMs and TCP are collected by centrifugation (500 g, 5min, 4 degree C); while the BCP was isolated through 25 percent, 35 percent, 45 percent, 80 percent Percoll step gradient after crach gently the anther in 0.4 M mannitol at 4 degree C and remove the anther wall and fragment. The BCP was distributed in the fraction of 35 perecent, 45 percent. Total RNA was extracted from sporophytic tissues and pollen at each development stage by use of RNAplant reagents (Tiangen Biotech) according to the manufacturer instructions. Total RNA was resolved on a denatured 15 percent polyacrylamide gel, then the fraction from 18 to 30 nt was collected.

characteristic: description

text: two-weeks

characteristic: developmental stage

text: Oryza sativa

text: Oryza sativa

text: root

characteristic: organism part

text: Oryza sativa

text: Root

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: BGI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: uniucleate microspores released from tetrad

text: pollen

text: anther

text: ArrayExpress

text: rice

text: UNM

text: Oryza sativa

text: Oryza sativa

text: pollen

text: Oryza sativa

text: UNM


text: BGI

text: public

characteristic: Submitter Id

text: two weeks

text: leaf

text: seedling

text: ArrayExpress

characteristic: broker name

text: rice

characteristic: common name

text: two-weeks

text: Oryza sativa

text: Oryza sativa

text: leaf

text: Oryza sativa

text: Leaf


E-MTAB-689:Callus cell

characteristic: External Id

text: BGI

characteristic: INSDC center name

text: public

text: E-MTAB-689:Callus cell

text: one month

text: callus

text: seedling

text: ArrayExpress

text: rice

text: one-month

text: Oryza sativa

characteristic: organism

text: Oryza sativa

text: callus

text: Oryza sativa

text: Callus cell


text: BGI

text: public

text: pollen granins before PMII and after PMI

characteristic: age

text: pollen

characteristic: bio source type

text: ahther

characteristic: biosourceprovider

text: ArrayExpress

text: rice

text: BCP

text: Oryza sativa

text: Oryza sativa

text: pollen

text: Oryza sativa

text: BCP


text: SC

text: public

text: human

text: Homo sapiens

text: Homo sapiens


text: SC

text: public

text: malaria parasite P. falciparum

text: Plasmodium falciparum

text: Plasmodium falciparum


text: SC

text: public

text: malaria parasite P. falciparum

text: Plasmodium falciparum

text: Plasmodium falciparum


text: Plasmodium falciparum

characteristic: ArrayExpress-Species

text: SC

text: public

text: malaria parasite P. falciparum

text: Plasmodium falciparum

text: Plasmodium falciparum


text: SC

text: public

text: African malaria mosquito

text: Anopheles gambiae

text: Anopheles gambiae


text: SC

text: public

text: malaria parasite P. vivax

text: Plasmodium vivax

text: Plasmodium vivax


text: SC

text: public

text: malaria parasite P. falciparum

text: Plasmodium falciparum

text: Plasmodium falciparum

characteristic: translation missing: en, metadata, sample, sample_metadata, sample_strain_att


characteristic: ENA-FIRST-PUBLIC

text: CRI

text: public

text: ArrayExpress

text: HeLa

characteristic: cell line

text: human

text: Protocols: HeLa cells grown in a 10 cm plate. Medium was replaced with ice-cold PBS buffer and cells were subjected to UV-C irradiation (100 mJ/cm2, Stratalinker 2400). Cells were then precipitated by centrifugation for 1 min at 14000 rpm and snap-frozen on dry ice. iCLIP or iCLAP protocol was followed to isolate RNA bound to TIA1 and TIAL1 proteins and amplify cDNA library as described in the manuscript. Specific barcodes were used for each RT reaction, and are specified below for each sequencing run. Random barcodes were also incoperated into cDNAs to distinguish between PCR duplication of cDNA products. The final products were obtained by PCR with Illumina pair-end sequencing primers: 5-CAAGCAGAAGACGGCATACGAGATCGGTCTCGGCATTCCTGCTGAACCGCTCTTCCGATCT-3; 5-AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCT-3

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: female

characteristic: sex

characteristic: title


text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: house mouse

text: Mus musculus

text: Mus musculus


HHV-5 (HCMV) strain HAN13 sample

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MRCVU

text: public

text: HHV-5 (HCMV) strain HAN13 sample

characteristic: Submitter Id

text: Human cytomegalovirus

characteristic: common name

text: HAN13 strain of human cytomegalovirus (HCMV, HHV-5)

text: Human herpesvirus 5

text: Human herpesvirus 5

characteristic: strain

text: HHV-5 (HCMV) strain HAN13


HHV-5 (HCMV) strain HAN20 sample

text: MRCVU

characteristic: INSDC center name

text: public

text: HHV-5 (HCMV) strain HAN20 sample

text: Human cytomegalovirus

text: HAN20 strain of human cytomegalovirus (HCMV, HHV-5)

text: Human herpesvirus 5

characteristic: organism

text: Human herpesvirus 5

text: HHV-5 (HCMV) strain HAN13


text: SC

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: SC

text: public

text: 278A_Sc_UWOPS03_461_4-sc-2010-11-01-9584

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Confirmed clones: CH1073-96G22 CH1073-490I13 ZFOS-394A12 ZFOS-434H1 ZFOS-879C9 CH1073-82B13 CH1073-180I8 CH1073-85L17 ZFOS-2094A6 ZFOS-429H6 CH1073-165A14 CH1073-70B4 CH1073-189D4 CH1073-75L15 CH1073-79D2 CH1073-151C15 CH1073-45D1 CH1073-127O1 CH73-338M21 CH1073-280L5 CH1073-274B24 CH211-18B6

characteristic: sample description

text: Danio rerio

text: Tuebingen


characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: zebrafish

text: Danio rerio

text: Confirmed clones: CH1073-320I17 CH1073-289G11 CH1073-155O13 CH1073-213M10 CH1073-64N7 CH1073-41N23 CH1073-285M21 CH1073-283H1 CH1073-256C15 CH1073-234E11 CH1073-228P3 CH1073-318C21 CH1073-282G9 CH1073-313C1 CH1073-182O23 CH1073-161M9 CH1073-142G5 CH1073-116K13 CH1073-20J7 CH1073-204G10 CH1073-68B20

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Confirmed clones: ZFOS-190E10 ZFOS-1720F8 ZFOS-674E8 CH211-97J8 CH73-235L24 CH73-25M22 CH1073-18D22 CH1073-192A15 CH1073-116P19 CH1073-221K10 ZFOS-1251H5 ZFOS-2072D3 ZFOS-1240A6 ZFOS-1960A1 ZFOS-36E1 CH1073-83B17 CH1073-229I23

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Confirmed clones: CH1073-116F17 CH1073-44O13 CH1073-287A11 CH211-252N1 ZFOS-1943E12 CH73-137G19 CH73-39O21 ZFOS-1336E5 ZFOS-2028F4 ZFOS-1294A10 ZFOS-1468H6 ZFOS-378G10 ZFOS-733A2 CH211-120E6 CH211-247L10 ZFOS-345C10 ZFOS-439D4 CH73-2I7 ZFOS-1235F6

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Confirmed clones: CH1073-405K10 CH1073-375K3 CH1073-400M12 CH1073-433I10 CH1073-396H11 CH1073-413M13 ZFOS-787A9 ZFOS-787G9 ZFOS-1171D3 ZFOS-327H11 CH1073-389L3 CH1073-387O6 CH1073-461I23 CH1073-286F20 ZFOS-2087H7 ZFOS-2773D5 CH211-153M16 CH1073-380I20 ZFOS-2325D5 ZFOS-219H8 ZFOS-1460B8 ZFOS-2045A7 ZFOS-2240D12 ZFOS-2282D3

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Confirmed clones: ZFOS-826H12 CH1073-141A18 CH1073-131B7 ZFOS-1020F5 ZFOS-1370A6 CH73-249P4 CH73-96G4 CH73-91J3 CH1073-181I19 CH1073-32N12 ZFOS-572A10 CH1073-136J17 CH73-37L19 ZFOS-80G12 CH73-97P12

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Confirmed clones: CH73-172N11 CH73-40K14 CH1073-18F9 CH211-214B12 ZFOS-299D9 ZFOS-273G12 ZFOS-2643H9 ZFOS-2742F3 ZFOS-2296C2 ZFOS-408F8 CH1073-171B11 CH73-201E11 CH73-40D1 ZFOS-895G5 ZFOS-2123G10 ZFOS-2542G12 ZFOS-2705B6 ZFOS-477D9

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Confirmed clones: CH1073-269L24 CH1073-164J2 CH73-91E4 ZFOS-505G6 CH73-253L15 CH73-95G16 ZFOS-5C11 CH1073-437H20 ZFOS-2167F9 CH73-146C13 CH73-328I22 CH73-308C16 CH73-287L1 CH73-276G4

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Confirmed clones: CH1073-504D6 CH1073-497D3 CH1073-115D16 CH1073-129K4 CH1073-200B5 CH1073-514J15 CH1073-506F13 CH1073-480E11 CH1073-490F12 CH1073-488J20 CH1073-494L20 CH1073-109I9 CH1073-491C3 CH1073-272N4 CH1073-281C9 CH1073-252D3 CH1073-278L3 CH1073-362I17 CH1073-17M9 CH1073-433H10 CH1073-83H14 CH1073-167D22

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Confirmed clones: CH73-81J10 CH73-85N17 CH73-177F2 CH73-196J4 CH73-271K6 CH73-272N17 CH73-285H20 CH73-288K16 CH73-315G12 CH73-320O3 CH73-356L9 CH73-212M16

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Confirmed clones: CH73-207B12 CH73-302M20 CH73-296P3 CH73-357G16 CH73-382F1 CH73-360E9 CH73-267M1 CH73-213C24 CH73-358G1 CH73-284B7 CH73-369J18

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Confirmed clones: CH1073-315D3 CH1073-338C4 CH73-193O7 CH73-320M22 CH211-265I8 CH211-288B7 ZFOS-1712H1 CH1073-304L11 CH73-41N4

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Confirmed clones: CH1073-397M10 CH73-159N10 CH73-120O19 CH73-336P8 CH73-341M24 CH73-140A15 CH73-130P3 CH73-346J6 CH73-318D12 CH1073-181L23 CH1073-141F5 CH1073-104A6 CH1073-375K17 CH73-342K24

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Confirmed clones: CH73-113O3 CH73-226J14 CH73-355O9 CH73-336G23 CH73-73J20 CH73-281B23 CH73-103H6 CH73-266G8 CH73-240A7 CH73-232C10

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Confirmed clones: ZFOS-392E11 ZFOS-857C2 ZFOS-1311A2 ZFOS-2158C6 ZFOS-429E11 ZFOS-835H9 ZFOS-2132H11 CH1073-345C16 CH1073-448B8 CH1073-464E10 CH1073-416H14 ZFOS-539D4 CH1073-418G15 ZFOS-1252C1 ZFOS-848G11 CH1073-463I16 CH1073-515D11 CH1073-416O24 CH1073-245G23 CH1073-253I13 CH1073-192B6 CH1073-199D17

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Confirmed clones: CH1073-369E11 RP71-85G4 ZFOS-1570E12 CH1073-211M21 CH1073-289A19 CH1073-368K2 CH1073-203E20 CH211-179H20 CH1073-294N8 CH73-196G9 CH73-360A13 CH73-359E20 CH73-45J22 CH73-54F10

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Confirmed clones: CH1073-360D4 CH1073-388D6 CH1073-391M4 CH1073-411B22 CH1073-416C10 CH1073-417O19 CH1073-420O12 CH1073-423L6 CH1073-432F14 CH1073-432P3 CH1073-437H3 CH1073-441D21 CH1073-443K5 CH73-33F7 CH73-83I19

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Confirmed clones: CH73-34M19 CH73-36P18 CH73-37O14 CH73-44M23 CH73-52F24 CH73-58F19 CH73-60F4 CH73-60O3 CH73-61D9 CH73-61F13 CH73-62O4 CH73-88A15 CH73-91M19 CH73-95C17 CH73-103N6 CH73-105D15 CH73-106O1 CH73-107C9 CH73-108C3

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Confirmed Clones: CH1073-64K14 CH1073-65B8 CH1073-102C23 CH1073-108A24 CH1073-128C13 CH1073-142K15 CH1073-146A21 CH1073-180F6 CH1073-236B17 CH1073-240P18 CH1073-305A5 CH1073-318N3 CH1073-321L5 CH1073-328P10 CH1073-343L23 CH1073-346N11 CH1073-353M1 CH1073-354D2 CH1073-368C10 CH1073-375F23 CH1073-376F16 CH1073-380D9 CH1073-380G20

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Confirmed clones: CH73-41E3 CH73-140J24 CH73-49H18 CH73-145C23 CH73-19K3 CH73-302A4 CH73-186J5 CH73-317M8 CH73-272G3 CH73-205C16

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Confirmed clones: RP71-87N23 ZFOS-174F7 ZFOS-293G10 CH73-375E10 CH73-370K12 ZFOS-188C7 CH211-29B13 ZFOS-236B6 ZFOS-243D2 CH1073-212N24 ZFOS-12H8 ZFOS-2623D6 ZFOS-396G1 CH73-7O22 ZFOS-502C12 CH211-241L22 ZFOS-1864C8

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Confirmed clones: CH73-113J11 CH73-119L12 CH73-123N10 CH73-134H14 CH73-140L14 CH73-142K2 CH73-152B6 CH73-158O8 CH73-159E15 CH73-159O20

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Confirmed clones: CH73-19E6 CH73-25H12 CH73-26J14 CH73-28E5 CH73-63A16 CH73-72B8 CH73-75N19 CH73-77C22 CH73-81K21 CH73-111O11

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Confirmed clones: CH73-250L12 CH73-254C24 CH73-206G1 CH73-360G3 CH1073-110A14 CH1073-468J22 ZFOS-2738D2 CH1073-344E2 CH73-37D23 CH1073-21I20 ZFOS-2224A8 CH73-14E4

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Confirmed clones: CH73-206L14 CH73-241K12 CH73-295F21 CH73-240F9 CH73-267M24 CH73-186K10 CH73-180M12 CH73-319F13 CH73-91D6 CH73-188M17

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Confirmed clones: CH73-232L7 CH73-218G8 CH73-387G10 CH73-14I21 CH73-388L18 CH73-313L2 CH1073-33P22 CH1073-248A12 CH73-111C12 CH1073-269L11 CH1073-269K14 CH1073-269A2

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Confirmed clones: CH73-273K5 CH73-332E21 CH73-378P21 CH73-389K12 CH73-350O23 CH73-310B13 CH73-384J22 CH73-72E14 CH73-236P6

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Confirmed clones: CH1073-515M18 CH1073-416N9 CH1073-484G12 CH1073-207N3 CH1073-179H14 CH1073-51H4 CH1073-421O22 CH1073-478B16 ZFOS-1804B9 ZFOS-2079H9 ZFOS-2479G11 ZFOS-247D12 ZFOS-293H3 ZFOS-690C2 ZFOS-735D3 ZFOS-903G4 CH1073-48P9 ZFOS-877A7 CH1073-487I19 CH1073-421I18 CH1073-506C7 CH1073-438G5 CH211-122J10 CH211-182G4 CH1073-190K20

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Confirmed clones: CH1073-155E16 CH1073-313L9 CH73-263I10 CH1073-362F17 CH1073-117I19 CH1073-235G10 CH1073-359D3 CH1073-220M13 CH1073-19J17 CH1073-129J16 ZFOS-1176D1 ZFOS-1591D12 CH1073-108I16 ZFOS-16D2 CH1073-60P23 CH1073-73O12

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Confirmed clones: CH73-364A3 ZFOS-484F1 CH1073-214P5 ZFOS-235G8 CH73-99L7 CH1073-513M4 CH1073-410E12 CH1073-440B1 CH1073-455E3 CH1073-311M2 CH1073-322F24 CH211-168A17 ZFOS-1960H2 ZFOS-2077H3 ZFOS-2369H6 ZFOS-319A6 ZFOS-581B1 CH211-193H22 CH211-268G18 ZFOS-876D1 ZFOS-1222D12 ZFOS-61C9

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Confirmed clones: ZFOS-1381B3 ZFOS-1546C11 ZFOS-904G1 CH1073-482C21 CH1073-485C23 ZFOS-681C7 ZFOS-689D3 CH1073-198O1 CH1073-67O7 CH1073-182A4 CH1073-477J13 CH73-365E14 ZFOS-1672F11 CH1073-343G18 CH211-199F11 ZFOS-70C4 ZFOS-1923H4 CH1073-85N19 CH1073-129K14 CH1073-15D10 CH1073-398N24

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Confirmed clones: CH73-89B24 CH73-132D17 CH73-202D19 CH73-273E21 CH73-273P4 CH73-289G9 CH73-293O16 CH73-294H9 CH73-322P19 CH73-333G9 CH73-343C18 CH73-208B20

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Confirmed clones: CH73-164E17 CH73-164H11 CH73-165K24 CH73-176D21 CH73-177H21 CH73-196N16 CH73-200H24 CH73-202L6 CH73-203B4 CH73-210F17 CH73-210G19

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Confirmed clones: CH73-218O9 CH73-220L5 CH73-224E16 CH73-231K16 CH73-250K19 CH73-253J8 CH73-305K11 CH73-344L17 CH73-345G4 CH73-362B7 CH73-375O21 CH73-377C7

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Confirmed clones: CH73-40J19 CH73-66I11 CH73-171M19 CH73-174N24 CH73-266I1 CH73-266K17 CH73-281M19 CH73-285F11 CH73-307K10 CH73-309L10 CH73-351D22 CH73-353L3

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Confirmed clones: CH1073-215J4 CH1073-391B20 ZFOS-218F12 CH1073-257A12 CH1073-273J4 CH1073-161L17 CH1073-14L12 CH1073-121E1 CH1073-222G5 CH1073-169F13 CH1073-117M1 CH73-259B23 CH1073-145H3 CH73-259N5 CH211-123P21 CH211-18F12 CH211-103L23

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: zebrafish

text: Danio rerio

text: Confirmed clones: CH1073-33L22 CH1073-108O17 CH1073-119O16 CH1073-241A11 CH1073-244I5 CH1073-338O3 CH1073-451L17 CH73-161G16 CH73-163F17 CH73-214J7 CH73-248C18 CH73-250B9 CH211-84F7 CH211-189D22 CH1073-194K9 CH1073-273K3

text: Danio rerio

text: Tuebingen


text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus


text: SC

text: public

text: malaria parasite P. ovale

text: Plasmodium ovale

text: Plasmodium ovale


text: MPI-EVA

text: public

characteristic: Novosibirsk sample ID

text: Norway rat

text: tame male 1

text: Novosibirsk

characteristic: geographic origin

text: Rattus norvegicus

text: tame selection line, 64th generation

characteristic: population

text: Rattus norvegicus


text: MPI-EVA

text: public

text: Norway rat

text: aggressive male 1

characteristic: description

text: Novosibirsk

text: Rattus norvegicus

text: aggressive selection line, 64th generation

text: Rattus norvegicus


text: MPI-EVA

characteristic: INSDC first public

text: public

text: Norway rat

text: aggressive female 2

text: Novosibirsk

text: Rattus norvegicus

text: Rattus norvegicus


text: MPI-EVA

characteristic: INSDC last update

text: public

text: Norway rat

text: tame male 2

text: Novosibirsk

text: Rattus norvegicus

text: tame selection line, 64th generation

text: Rattus norvegicus


text: MPI-EVA

text: public

characteristic: INSDC status

text: Norway rat

text: tame female 1

text: Novosibirsk

text: Rattus norvegicus

text: tame selection line, 64th generation

text: Rattus norvegicus


text: MPI-EVA

text: public

characteristic: SRA accession

text: Norway rat

text: aggressive male 2

text: Novosibirsk

text: Rattus norvegicus

text: Rattus norvegicus


characteristic: ENA-LAST-UPDATE

text: MPI-EVA

text: public

text: Norway rat

text: aggressive female 1

text: Novosibirsk

text: Rattus norvegicus

text: Rattus norvegicus


characteristic: External Id

text: MPI-EVA

text: public

text: Norway rat

text: tame female 2

text: Novosibirsk

text: Rattus norvegicus

text: TAME selection line, 64th generation

text: Rattus norvegicus


text: SC

text: public

characteristic: Submitter Id

text: house mouse

text: Mus musculus

text: Mus musculus

text: FVB/N


text: SC

text: public

text: house mouse

characteristic: common name

text: Mus musculus

text: Mus musculus


text: SC

text: public

text: malaria parasite P. falciparum

text: Plasmodium falciparum

text: Plasmodium falciparum


text: SHWFGF

text: public

text: Canton S

characteristic: StrainOrLine

text: 7 days

characteristic: age

text: ArrayExpress

characteristic: broker name

text: fruit fly

text: Protocols: Wild-type Drosophila melanogaster (Canton S strain) were raised on standard medium on a 12:12 h L:D cycle, at 23C, and at 55% r.h. To facilitate the collection of accurately staged adults, a laying population of around 12 males and 12 females were transferred to fresh vials daily. When adults subsequently emerged, they were transferred to fresh vials on the day of emergence, and used 7 days later. Organism parts used: tubule (The full length of the Malpighian tubules including upper and lower ureter, severed at their insertion into the hindgut), testes (testes until they end up in the collecting duct), head (The complete head, severed at the neck). RNA extraction: QIAGEN RNeasy Mini columns. 30 wholeflies are pooled for RNA extraction, 100 testes are pooled for RNA extraction, 600pairs of tubules pooled for RNA extraction, 300 heads are pooled fro RNA extraction

characteristic: genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: tubule

characteristic: organism part

text: Drosophila melanogaster

characteristic: sex

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: SHWFGF

characteristic: INSDC center name

text: public

text: Canton S

text: 7 days

text: ArrayExpress

text: fruit fly

text: Drosophila melanogaster

characteristic: organism

text: Drosophila melanogaster

text: testes

text: Drosophila melanogaster


text: SHWFGF

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Canton S

text: 7 days

text: ArrayExpress

text: fruit fly

characteristic: description

text: Drosophila melanogaster

text: Drosophila melanogaster

text: whole fly

text: Drosophila melanogaster


HHV-5 (HCMV) strain AD169 varUC sample

characteristic: ENA-LAST-UPDATE

text: MRCVU

text: public

characteristic: INSDC status

characteristic: SRA accession

text: HHV-5 (HCMV) strain AD169 varUC sample

text: Human cytomegalovirus

text: variant varUC of the AD169 strain of human cytomegalovirus (HCMV, HHV-5)

text: Human herpesvirus 5

text: Human herpesvirus 5

characteristic: strain

text: HHV-5 (HCMV) strain AD169 varUC

text: varUC

characteristic: variant


characteristic: External Id

text: SC

text: public

characteristic: Submitter Id

text: zebrafish

characteristic: common name

text: RNA extracted from zebrafish embryo at 14 dpf

text: Danio rerio

text: Danio rerio

text: Mixed

text: Tuebingen


text: SC

text: public

text: zebrafish

text: RNA extracted from zebrafish embryo at 5 dpf

text: Danio rerio

text: Danio rerio

text: Mixed

text: Tuebingen


text: SC

text: public

text: zebrafish

text: RNA extracted from whole male adult zebrafish without head or testis

text: Danio rerio

text: Danio rerio

text: Male

text: Tuebingen


text: SC

text: public

text: zebrafish

text: RNA extracted from whole female adult zebrafish without head or ovary

text: Danio rerio

text: Danio rerio

text: Female

text: Tuebingen


text: SC

text: public

text: zebrafish

text: RNA extracted from adult zebrafish ovary

text: Danio rerio

text: Danio rerio

text: Female

text: Tuebingen


text: SC

text: public

text: zebrafish

text: RNA extracted from zebrafish embryo at 3 dpf

text: Danio rerio

text: Danio rerio

text: Mixed

text: Tuebingen


text: SC

text: public

text: zebrafish

text: RNA extracted from zebrafish embryo at 2 dpf

text: Danio rerio

text: Danio rerio

text: Mixed

text: Tuebingen


text: SC

text: public

text: zebrafish

text: RNA extracted from female adult zebrafish head

text: Danio rerio

text: Danio rerio

text: Female

text: Tuebingen


Kuba

text: IBB PAS

text: public

text: Kuba

tag: Namespace:IBB PAS

text: potato

text: Solanum tuberosum doubled monoploid subclone DH Kuba 48/6, derived from The Plant Breeding and Acclimatization Institute (IHAR) - National Research Institute Mlochow, Poland

text: Solanum tuberosum

text: Solanum tuberosum

text: Polish Potato Genome Sequencing


text: female

characteristic: ArrayExpress-Sex

text: Mus musculus

characteristic: ArrayExpress-Species

text: SC

text: public

text: Bikoff_NOD_26L-sc-2011-04-19T13:23:26Z-1046904

text: house mouse

text: Mus musculus

text: mutant lacking a spleen

characteristic: sample description

text: Mus musculus


text: female

text: Mus musculus

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: Bikoff_NOD_26J_-sc-2011-04-19T13:23:26Z-1046903

text: house mouse

text: Mus musculus

text: mutant lacking a spleen

text: Mus musculus


text: female

text: Mus musculus

text: SC

characteristic: INSDC center name

text: public

text: house mouse

text: Mus musculus

text: Control

text: Mus musculus


text: SC

text: public

text: house mouse

text: Mus musculus

characteristic: organism

text: Mus musculus


text: SC

characteristic: INSDC first public

text: public

text: zebrafish

text: Danio rerio

text: Danio rerio

text: TL


text: SC

characteristic: INSDC last update

text: public

text: house mouse

text: Mus musculus

text: Mus musculus


text: CRUK-CRI

text: public

text: E-TABM-828:Rad21_liver_ab992_hsaHepG2CRI 2

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: human

text: Protocols: MCF7 human breast cancer cells were grown as previously described (Neve et al. 2006). Unless otherwise stated, during all experiments oestrogen was added at a final concentration of 100 nM for 45 minutes (ChIP) or 24 hours (cell cycle analysis). HepG2 cells were grown in DMEM supplemented with 10% FBS. ChIP experiments were performed with well-characterized antibodies against CTCF (Millipore, 07-729), STAG1 (abcam, ab4457), RAD21 (abcam, ab992), ERa (santa cruz, sc-543), CEBPa (santa cruz, sc-9314) and MED12 (abcam, ab70842). ChIP-seq experiments were performed as recently described (Schmidt et al. 2009)

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: liver

characteristic: organism part

text: Homo sapiens

text: male

characteristic: sex


characteristic: ENA-LAST-UPDATE

text: CRUK-CRI

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-TABM-828:Rad21_breast_ab992_hsa_CTCFkd 1

text: ArrayExpress

text: human

text: Protocols: Cells were grown in phenol red-free DMEM supplemented with 5% charcoal dextran treated serum for at least three days (cell cycle analysis) or in full media (RNAi-ChIP-seq). Cells were transfected with siRNA for 48 hours using Lipofectamine2000 (Invitrogen, CA, USA). AllStars Negative Control siRNA (Qiagen) was used as negative (mock) controls. CTCF RNAi (Invitrogen Stealth, sense: GCGCUCUAA-GAAAGAAGAUUCCUCU, antisense: AGAGGAAUCUUCUUUCUUAGAGCGC). RAD21#1 (Invitrogen Stealth; sense: CAGCUUGAAUCAGAGUAGAGUGGAA, antisense: UUCCACUCUACUCUGAUUCAAGCUG) RAD21#2 (ON-TARGETplus SMARTpool L-006832) ChIP experiments were performed with well-characterized antibodies against CTCF (Millipore, 07-729), STAG1 (abcam, ab4457), RAD21 (abcam, ab992), ERa (santa cruz, sc-543), CEBPa (santa cruz, sc-9314) and MED12 (abcam, ab70842). ChIP-seq experiments were performed as recently described (Schmidt et al. 2009)

text: Homo sapiens

text: Homo sapiens

text: breast

text: Homo sapiens

text: female


characteristic: External Id

text: CRUK-CRI

text: public

text: E-TABM-828:Input_liver_none_hsaHepG2CRI 1

characteristic: Submitter Id

text: ArrayExpress

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: liver

text: Homo sapiens

text: male


text: CRUK-CRI

text: public

text: E-TABM-828:CTCF_liver_07729upstate_hsaHepG2CRI 2

text: ArrayExpress

text: human

text: Homo sapiens

text: Homo sapiens

text: liver

text: Homo sapiens

text: male


text: CRUK-CRI

text: public

text: E-TABM-828:Rad21_breast_ab992_hsaMCF7_treat 2

text: ArrayExpress

text: human

text: Homo sapiens

text: Homo sapiens

text: breast

text: Homo sapiens

text: female


text: CRUK-CRI

text: public

text: E-TABM-828:Rad21_liver_ab992_hsaHepG2CRI 1

text: ArrayExpress

text: human

text: Homo sapiens

text: Homo sapiens

text: liver

text: Homo sapiens

text: male


E-TABM-828:HNF4a_liver_ARP31046_hsa 1

text: CRUK-CRI

text: public

text: E-TABM-828:HNF4a_liver_ARP31046_hsa 1

text: ArrayExpress

text: human

text: Homo sapiens

text: Homo sapiens

text: liver

text: Homo sapiens

text: male


text: CRUK-CRI

text: public

text: E-TABM-828:CTCF_liver_07729upstate_hsaHepG2CRI 1

text: ArrayExpress

text: human

text: Homo sapiens

text: Homo sapiens

text: liver

text: Homo sapiens

text: male


text: CRUK-CRI

text: public

text: E-TABM-828:do748_Input_breast_none_hsa_CTCF_kd 1

text: ArrayExpress

text: human

text: Homo sapiens

text: Homo sapiens

text: breast

text: Homo sapiens

text: female


text: CRUK-CRI

text: public

text: E-TABM-828:do750_Input_breast_none_hsa_CTCF_mock 1

text: ArrayExpress

text: human

text: Homo sapiens

text: Homo sapiens

text: breast

text: Homo sapiens

text: female


text: CRUK-CRI

text: public

text: E-TABM-828:Era_breast_sc543_hsaMCF7_vehicle

text: ArrayExpress

text: human

text: Homo sapiens

text: Homo sapiens

text: breast

text: Homo sapiens

text: female


text: CRUK-CRI

text: public

text: E-TABM-828:SA1_breast_ab4457_hsaMCF7_treat 1

text: ArrayExpress

text: human

text: Homo sapiens

text: Homo sapiens

text: breast

text: Homo sapiens

text: female


text: CRUK-CRI

text: public

text: E-TABM-828:Rad21_breast_ab992_hsa_CTCF_mock 1

text: ArrayExpress

text: human

text: Homo sapiens

text: Homo sapiens

text: breast

text: Homo sapiens

text: female


text: CRUK-CRI

text: public

text: E-TABM-828:CEBPA_liver_sc9314_hsaHepG2CRI 2

text: ArrayExpress

text: human

text: Homo sapiens

text: Homo sapiens

text: liver

text: Homo sapiens

text: male


text: CRUK-CRI

text: public

text: E-TABM-828:SA1_liver_ab4457_hsaHepG2CRI 1

text: ArrayExpress

text: human

text: Homo sapiens

text: Homo sapiens

text: liver

text: Homo sapiens

text: male


text: CRUK-CRI

text: public

text: E-TABM-828:SA1_breast_ab4457_hsaMCF7_vehicle 1

text: ArrayExpress

text: human

text: Homo sapiens

text: Homo sapiens

text: breast

text: Homo sapiens

text: female


text: CRUK-CRI

text: public

text: E-TABM-828:SA1_breast_ab4457_hsa_CTCF_mock 1

text: ArrayExpress

text: human

text: Homo sapiens

text: Homo sapiens

text: breast

text: Homo sapiens

text: female


text: CRUK-CRI

text: public

text: E-TABM-828:SA1_breast_ab4457_hsa_CTCF_kd 1

text: ArrayExpress

text: human

text: Homo sapiens

text: Homo sapiens

text: breast

text: Homo sapiens

text: female


text: CRUK-CRI

text: public

text: E-TABM-828:Rad21_breast_ab992_hsaMCF7_treat 1

text: ArrayExpress

text: human

text: Protocols: MCF7 human breast cancer cells were grown as previously described (Neve et al. 2006). Unless otherwise stated, during all experiments oestrogen was added at a final concentration of 100 nM for 45 minutes (ChIP) or 24 hours (cell cycle analysis). HepG2 cells were grown in DMEM supplemented with 10% FBS. ChIP experiments were performed with well-characterized antibodies against CTCF (Millipore, 07-729), STAG1 (abcam, ab4457), RAD21 (abcam, ab992), ERa (santa cruz, sc-543), CEBPa (santa cruz, sc-9314) and MED12 (abcam, ab70842). ChIP-seq experiments were performed as recently described (Schmidt et al. 2009)

text: Homo sapiens

text: Homo sapiens

text: breast

text: Homo sapiens

text: female


text: CRUK-CRI

text: public

text: E-TABM-828:SA1_breast_ab4457_hsaMCF7_vehicle 2

text: ArrayExpress

text: human

text: Homo sapiens

text: Homo sapiens

text: breast

text: Homo sapiens

text: female


E-TABM-828:Input_breast_none_hsamcf7 1

text: CRUK-CRI

text: public

text: E-TABM-828:Input_breast_none_hsamcf7 1

text: ArrayExpress

text: human

text: Homo sapiens

text: Homo sapiens

text: breast

text: Homo sapiens

text: female


E-TABM-828:MCF7_CTCF_E45_rep1 2

text: CRUK-CRI

text: public

text: E-TABM-828:MCF7_CTCF_E45_rep1 2

text: ArrayExpress

text: human

text: Homo sapiens

text: Homo sapiens

text: breast

text: Homo sapiens

text: female


text: CRUK-CRI

text: public

text: E-TABM-828:SA1_liver_ab4457_hsaHepG2CRI 2

text: ArrayExpress

text: human

text: Homo sapiens

text: Homo sapiens

text: liver

text: Homo sapiens

text: male


text: CRUK-CRI

text: public

text: E-TABM-828:CTCF_breast_ab992_hsa_CTCFkd 2

text: ArrayExpress

text: human

text: Homo sapiens

text: Homo sapiens

text: breast

text: Homo sapiens

text: female


E-TABM-828:MCF7_CTCF_E45_rep1 1

text: CRUK-CRI

text: public

text: E-TABM-828:MCF7_CTCF_E45_rep1 1

text: ArrayExpress

text: human

text: Homo sapiens

text: Homo sapiens

text: breast

text: Homo sapiens

text: female


text: CRUK-CRI

text: public

text: E-TABM-828:Rad21_breast_ab992_hsaMCF7_vehicle 2

text: ArrayExpress

text: human

text: Homo sapiens

text: Homo sapiens

text: breast

text: Homo sapiens

text: female


text: CRUK-CRI

text: public

text: E-TABM-828:Era_breast_sc543_hsaMCF7_treat 1

text: ArrayExpress

text: human

text: Homo sapiens

text: Homo sapiens

text: breast

text: Homo sapiens

text: female


text: CRUK-CRI

text: public

text: E-TABM-828:CTCF_breast_ab992_hsa_CTCFkd 1

text: ArrayExpress

text: human

text: Homo sapiens

text: Homo sapiens

text: breast

text: Homo sapiens

text: female


E-TABM-828:Input_breast_none_hsamcf7 2

text: CRUK-CRI

text: public

text: E-TABM-828:Input_breast_none_hsamcf7 2

text: ArrayExpress

text: human

text: Homo sapiens

text: Homo sapiens

text: breast

text: Homo sapiens

text: female


text: CRUK-CRI

text: public

text: E-TABM-828:CEBPA_liver_sc9314_hsaHepG2CRI 1

text: ArrayExpress

text: human

text: Homo sapiens

text: Homo sapiens

text: liver

text: Homo sapiens

text: male


text: NCGR

text: public

text: rice

text: HP

text: HP

characteristic: landrace

text: Oryza sativa

text: Oryza sativa


Nipponbare

characteristic: ENA-FIRST-PUBLIC

text: NCGR

text: public

text: Nipponbare

text: rice

text: HP

text: HP

text: Oryza sativa

text: Oryza sativa


text: NCGR

characteristic: INSDC center name

text: public

text: rice

text: HP

text: HP

text: Oryza sativa

text: Oryza sativa


text: TGAC

text: public

text: rape

text: Cultivar 'Liho'

text: Brassica napus

characteristic: organism

text: Brassica napus


text: TGAC

characteristic: INSDC first public

text: public

text: rape

text: Cultivar 'Regent'

text: Brassica napus

text: Brassica napus


text: TGAC

characteristic: INSDC last update

text: public

text: rape

text: Doubled haploid line TN177 from Tapidor x Ningyou 7 mapping population

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Doubled haploid line TN176 from Tapidor x Ningyou 7 mapping population

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Doubled haploid line TN172 from Tapidor x Ningyou 7 mapping population

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Doubled haploid line TN171 from Tapidor x Ningyou 7 mapping population

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Cultivar 'Bronowski'

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Cultivar 'Bienvenu'

text: Brassica napus

text: Brassica napus


NIN

text: TGAC

text: public

text: NIN

text: rape

text: Cultivar 'Ningyou 7'

text: Brassica napus

text: Brassica napus


TAP

text: TGAC

text: public

text: TAP

text: rape

text: Cultivar 'Tapidor'

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Doubled haploid line TN04 from Tapidor x Ningyou 7 mapping population

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Doubled haploid line TN08 from Tapidor x Ningyou 7 mapping population

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Doubled haploid line TN05 from Tapidor x Ningyou 7 mapping population

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Doubled haploid line TN161 from Tapidor x Ningyou 7 mapping population

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Doubled haploid line TN149 from Tapidor x Ningyou 7 mapping population

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Doubled haploid line TN138 from Tapidor x Ningyou 7 mapping population

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Doubled haploid line TN129 from Tapidor x Ningyou 7 mapping population

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Doubled haploid line TN128 from Tapidor x Ningyou 7 mapping population

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Doubled haploid line TN126 from Tapidor x Ningyou 7 mapping population

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Doubled haploid line TN124 from Tapidor x Ningyou 7 mapping population

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Doubled haploid line TN121 from Tapidor x Ningyou 7 mapping population

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Cultivar 'Shengliyoucai'

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Cultivar 'Chuanyou 2'

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: field mustard

text: Cultivar 'Chengdu Ai Youcai'

text: Brassica rapa

text: Brassica rapa


text: TGAC

text: public

text: rape

text: Doubled haploid line TN163 from Tapidor x Ningyou 7 mapping population

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Doubled haploid line TN38 from Tapidor x Ningyou 7 mapping population

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Doubled haploid line TN31 from Tapidor x Ningyou 7 mapping population

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Doubled haploid line TN44 from Tapidor x Ningyou 7 mapping population

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Doubled haploid line TN30 from Tapidor x Ningyou 7 mapping population

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Doubled haploid line TN24 from Tapidor x Ningyou 7 mapping population

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Doubled haploid line TN170 from Tapidor x Ningyou 7 mapping population

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Doubled haploid line TN12 from Tapidor x Ningyou 7 mapping population

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Doubled haploid line TN28 from Tapidor x Ningyou 7 mapping population

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Doubled haploid line TN51 from Tapidor x Ningyou 7 mapping population

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Doubled haploid line TN48from Tapidor x Ningyou 7 mapping population

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Doubled haploid line TN10 from Tapidor x Ningyou 7 mapping population

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Doubled haploid line TN108 from Tapidor x Ningyou 7 mapping population

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Doubled haploid line TN109 from Tapidor x Ningyou 7 mapping population

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Doubled haploid line TN57 from Tapidor x Ningyou 7 mapping population

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Doubled haploid line TN76 from Tapidor x Ningyou 7 mapping population

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Doubled haploid line TN72 from Tapidor x Ningyou 7 mapping population

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Doubled haploid line TN77 from Tapidor x Ningyou 7 mapping population

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Doubled haploid line TN88 from Tapidor x Ningyou 7 mapping population

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Doubled haploid line TN85 from Tapidor x Ningyou 7 mapping population

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Doubled haploid line TN90 from Tapidor x Ningyou 7 mapping population

text: Brassica napus

text: Brassica napus


text: TGAC

text: public

text: rape

text: Doubled haploid line TN103 from Tapidor x Ningyou 7 mapping population

text: Brassica napus

text: Brassica napus


characteristic: ENA-CHECKLIST

text: UNISA

text: public

text: Electrode biofilms

characteristic: bio material

text: microbial electrochemical remediation systems

characteristic: cell type

characteristic: collection date

text: Australia

characteristic: geographic location (country and/or sea)

text: microbial electrochemical reactors

characteristic: isolation source

text: microbial electrochemical reactors

characteristic: lab host

text: 34.8140 S 138.6120 E

characteristic: lat lon

text: Budding

characteristic: mating type

text: Rhodopseudomonas palustris

text: Rhodopseudomonas palustris

text: strain RP2

characteristic: strain

text: Rhodopseudomonas palustris strain RP2

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: USDA-FS

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: TTGT

characteristic: barcode

text: Oneida Co, WI, USA

characteristic: collection site

text: fisher

characteristic: common name

text: Wisconsin M. pennanti pennanti #5

characteristic: description

characteristic: genbank

characteristic: lane

characteristic: latitude

characteristic: longitude

text: Martes pennanti

text: Great Lakes--WI

characteristic: region

text: Martes pennanti

text: pennanti

characteristic: subspecies


characteristic: ENA-FIRST-PUBLIC

text: USDA-FS

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: GCTT

text: Oneida Co, WI, USA

text: fisher

text: Wisconsin M. pennanti pennanti #4

text: Martes pennanti

characteristic: organism

text: Great Lakes--WI

text: Martes pennanti

text: pennanti


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: USDA-FS

text: public

characteristic: INSDC status

characteristic: SRA accession

text: GCTT

text: Fresno Co, CA, USA

text: fisher

text: S. California M. pennanti pacifica #6

text: Martes pennanti

text: S. California

text: Martes pennanti

text: pacifica


text: USDA-FS

text: public

characteristic: Submitter Id

text: GATT

characteristic: barcode

text: Near Williams Lake, BC, CAN

characteristic: collection site

text: fisher

characteristic: common name

text: British Columbia M. pennanti columbiana #7

text: Martes pennanti

text: British Columbia

text: Martes pennanti

text: columbiana


text: USDA-FS

text: public

text: TACT

text: Near Williams Lake, BC, CAN

text: fisher

text: British Columbia M. pennanti columbiana #6

characteristic: description

characteristic: genbank

characteristic: lane

characteristic: latitude

text: Martes pennanti

text: British Columbia

text: Martes pennanti

text: columbiana


characteristic: ENA-FIRST-PUBLIC

text: USDA-FS

text: public

text: CACT

text: Oneida Co, WI, USA

text: fisher

text: Wisconsin M. pennanti pennanti #3

characteristic: longitude

text: Martes pennanti

text: Great Lakes--WI

characteristic: region

text: Martes pennanti

text: pennanti

characteristic: subspecies


text: USDA-FS

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: TCAT

text: Idaho Co, ID, USA

text: fisher

text: Idaho M. pennanti columbiana #6

text: Martes pennanti

characteristic: organism

text: Idaho/Montana

text: Martes pennanti

text: columbiana


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: USDA-FS

text: public

characteristic: INSDC status

characteristic: SRA accession

text: CCCT

text: Near Williams Lake, BC, CAN

text: fisher

text: British Columbia M. pennanti columbiana #3

text: Martes pennanti

text: British Columbia

text: Martes pennanti

text: columbiana


text: USDA-FS

text: public

characteristic: Submitter Id

text: AGCT

characteristic: barcode

text: Near Williams Lake, BC, CAN

characteristic: collection site

text: fisher

characteristic: common name

text: British Columbia M. pennanti columbiana #2

text: Martes pennanti

text: British Columbia

text: Martes pennanti

text: columbiana


text: USDA-FS

text: public

text: GTAT

text: Near Williams Lake, BC, CAN

text: fisher

text: British Columbia M. pennanti columbiana #5

characteristic: description

characteristic: genbank

characteristic: lane

characteristic: latitude

text: Martes pennanti

text: British Columbia

text: Martes pennanti

text: columbiana


characteristic: ENA-FIRST-PUBLIC

text: USDA-FS

text: public

text: CTGT

text: Near Williams Lake, BC, CAN

text: fisher

text: British Columbia M. pennanti columbiana #4

characteristic: longitude

text: Martes pennanti

text: British Columbia

characteristic: region

text: Martes pennanti

text: columbiana

characteristic: subspecies


text: USDA-FS

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ACGT

text: Ravalli Co, MT, USA

text: fisher

text: Montana M. pennanti columbiana #1

text: Martes pennanti

characteristic: organism

text: Idaho/Montana

text: Martes pennanti

text: columbiana


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: USDA-FS

text: public

characteristic: INSDC status

characteristic: SRA accession

text: CACT

text: Idaho Co, ID, USA

text: fisher

text: Idaho M. pennanti columbiana #3

text: Martes pennanti

text: Idaho/Montana

text: Martes pennanti

text: columbiana


text: USDA-FS

text: public

characteristic: Submitter Id

text: ATGT

characteristic: barcode

text: Near Williams Lake, BC, CAN

characteristic: collection site

text: fisher

characteristic: common name

text: British Columbia M. pennanti columbiana #1

text: Martes pennanti

text: British Columbia

text: Martes pennanti

text: columbiana