zostqnnewf

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: zostqnnewf

text: AACCGCATAAGT

characteristic: barcodesequence

characteristic: collection date

characteristic: conductivity

characteristic: description

text: zostera sample

characteristic: dissolved oxygen

text: coastal sea water

characteristic: environment (biome)

text: sea grass bed

characteristic: environment (feature)

text: Yes

text: Canada

characteristic: geographic location (latitude)

text: new

text: Zostera marina

characteristic: host species

characteristic: host tax id

text: zostera

text: e

text: uncultured eukaryote

characteristic: pcr primers

characteristic: pressure

text: triquet

characteristic: region

characteristic: run id

text: uncultured eukaryote

text: Illumina MiSeq

text: no


zostqnolda

status: PUBLIC

tag: attribute

characteristic: DNA extraction plate

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: zostqnolda

tag: Namespace:UNIVERSITY OF BRITISH COLUMBIA

characteristic: Submitter Id

text: CCGCGTCTCAAC

text: zostera sample

text: coastal sea water

text: sea grass bed

text: environment determined by a biofilm on a plant surface

characteristic: environment (material)

text: Yes

characteristic: environmental sample

characteristic: envo

characteristic: further details

text: Canada

characteristic: geographic location (country and/or sea)

unit: m

characteristic: geographic location (depth)

unit: DD

characteristic: geographic location (longitude)

text: old

characteristic: growth

text: Zostera marina

text: zostera

text: a

text: uncultured eukaryote

characteristic: organism

characteristic: par

text: E572F: CYGCGGTAATTCCAGCTC, E1009R: CRAAGAYGATYAGATACCRT

text: triquet

text: uncultured eukaryote

text: Illumina MiSeq

text: no


zostqnoldb

characteristic: DNA extraction plate

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF BRITISH COLUMBIA

text: public

characteristic: INSDC status

characteristic: SRA accession

text: zostqnoldb

text: CAATGTAGACAC

characteristic: barcodesequence

characteristic: collection date

characteristic: conductivity

text: zostera sample

characteristic: description

characteristic: dissolved oxygen

text: coastal sea water

characteristic: environment (biome)

text: sea grass bed

characteristic: environment (feature)

text: Yes

text: Canada

characteristic: geographic location (latitude)

text: old

text: Zostera marina

characteristic: host species

characteristic: host tax id

text: zostera

text: d

text: uncultured eukaryote

characteristic: pcr primers

text: triquet

text: uncultured eukaryote

text: Illumina MiSeq

text: no


zostqnoldc

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: zostqnoldc

characteristic: Submitter Id

text: CTGATGTACACG

text: zostera sample

text: coastal sea water

text: sea grass bed

characteristic: environment (material)

text: Yes

characteristic: environmental sample

characteristic: envo

characteristic: further details

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (longitude)

text: old

characteristic: growth

text: Zostera marina

text: zostera

text: c

text: uncultured eukaryote

characteristic: organism

characteristic: par

text: triquet

text: uncultured eukaryote

text: Illumina MiSeq

text: no


zostqnoldd

characteristic: DNA extraction plate

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF BRITISH COLUMBIA

text: public

characteristic: INSDC status

characteristic: SRA accession

text: zostqnoldd

text: GCGAGGAAGTCC

characteristic: barcodesequence

characteristic: collection date

characteristic: conductivity

text: zostera sample

characteristic: description

characteristic: dissolved oxygen

text: coastal sea water

characteristic: environment (biome)

text: sea grass bed

characteristic: environment (feature)

text: Yes

text: Canada

characteristic: geographic location (latitude)

text: old

text: Zostera marina

characteristic: host species

characteristic: host tax id

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text: b

text: uncultured eukaryote

characteristic: pcr primers

text: triquet

text: uncultured eukaryote

text: Illumina MiSeq

text: no


zostqnolde

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: zostqnolde

characteristic: Submitter Id

text: GACGTTAAGAAT

text: zostera sample

text: coastal sea water

text: sea grass bed

characteristic: environment (material)

text: Yes

characteristic: environmental sample

characteristic: envo

characteristic: further details

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (longitude)

text: old

characteristic: growth

text: Zostera marina

text: zostera

text: f

text: uncultured eukaryote

characteristic: organism

characteristic: par

text: triquet

text: uncultured eukaryote

text: Illumina MiSeq

text: no


zostqnoldf

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characteristic: ENA-CHECKLIST

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text: public

characteristic: INSDC status

characteristic: SRA accession

text: zostqnoldf

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characteristic: barcodesequence

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characteristic: conductivity

text: zostera sample

characteristic: description

characteristic: dissolved oxygen

text: coastal sea water

characteristic: environment (biome)

text: sea grass bed

characteristic: environment (feature)

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text: Canada

characteristic: geographic location (latitude)

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text: Zostera marina

characteristic: host species

characteristic: host tax id

text: zostera

text: e

text: uncultured eukaryote

characteristic: pcr primers

characteristic: pressure

text: triquet

characteristic: region

characteristic: run id

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text: uncultured eukaryote

text: Illumina MiSeq

text: no


zostqsnewa

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characteristic: ENA-LAST-UPDATE

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characteristic: INSDC center name

characteristic: INSDC first public

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text: public

text: zostqsnewa

characteristic: Submitter Id

text: GGCGTAACGGCA

text: zostera sample

text: coastal sea water

text: sea grass bed

characteristic: environment (material)

text: Yes

characteristic: environmental sample

characteristic: envo

characteristic: further details

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (longitude)

text: new

characteristic: growth

text: Zostera marina

text: zostera

text: e

text: uncultured eukaryote

characteristic: organism

characteristic: par

text: triquet

text: uncultured eukaryote

text: Illumina MiSeq

text: yes


zostqsnewb

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characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

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text: public

characteristic: INSDC status

characteristic: SRA accession

text: zostqsnewb

text: CCTCGCATGACC

characteristic: barcodesequence

characteristic: collection date

characteristic: conductivity

characteristic: description

text: zostera sample

characteristic: dissolved oxygen

text: coastal sea water

characteristic: environment (biome)

text: sea grass bed

characteristic: environment (feature)

text: Yes

text: Canada

characteristic: geographic location (latitude)

text: new

text: Zostera marina

characteristic: host species

characteristic: host tax id

text: zostera

text: c

text: uncultured eukaryote

text: triquet

text: uncultured eukaryote

text: Illumina MiSeq

text: yes


zostqsnewc

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: zostqsnewc

characteristic: Submitter Id

text: ACGGCGTTATGT

text: zostera sample

text: coastal sea water

text: sea grass bed

characteristic: environment (material)

text: Yes

characteristic: environmental sample

characteristic: envo

characteristic: further details

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (longitude)

text: new

characteristic: growth

text: Zostera marina

text: zostera

text: a

text: uncultured eukaryote

characteristic: organism

text: triquet

text: uncultured eukaryote

text: Illumina MiSeq

text: yes


zostqsnewd

characteristic: DNA extraction plate

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF BRITISH COLUMBIA

text: public

characteristic: INSDC status

characteristic: SRA accession

text: zostqsnewd

text: AGACTTCTCAGG

characteristic: barcodesequence

characteristic: collection date

characteristic: conductivity

characteristic: description

text: zostera sample

characteristic: dissolved oxygen

text: coastal sea water

characteristic: environment (biome)

text: sea grass bed

characteristic: environment (feature)

text: Yes

text: Canada

characteristic: geographic location (latitude)

text: new

text: Zostera marina

characteristic: host species

text: zostera

text: d

text: uncultured eukaryote

text: triquet

text: uncultured eukaryote

text: Illumina MiSeq

text: yes


zostqsnewe

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: zostqsnewe

characteristic: Submitter Id

text: GTACTCGAACCA

text: zostera sample

text: coastal sea water

text: sea grass bed

characteristic: environment (material)

text: Yes

characteristic: environmental sample

characteristic: envo

characteristic: further details

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (longitude)

text: new

text: Zostera marina

characteristic: host tax id

text: zostera

text: b

text: uncultured eukaryote

characteristic: par

text: triquet

text: uncultured eukaryote

text: Illumina MiSeq

text: yes


zostqsnewf

characteristic: DNA extraction plate

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF BRITISH COLUMBIA

text: public

characteristic: INSDC status

characteristic: SRA accession

text: zostqsnewf

text: ATAGGAATAACC

characteristic: barcodesequence

characteristic: collection date

characteristic: conductivity

characteristic: description

text: zostera sample

characteristic: dissolved oxygen

text: coastal sea water

characteristic: environment (biome)

text: sea grass bed

characteristic: environment (feature)

text: Yes

text: Canada

characteristic: geographic location (latitude)

text: new

characteristic: growth

text: Zostera marina

text: zostera

text: f

text: uncultured eukaryote

characteristic: organism

text: triquet

text: uncultured eukaryote

text: Illumina MiSeq

text: yes


zostqsolda

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: zostqsolda

characteristic: Submitter Id

text: ATAGTCCTTTAA

text: zostera sample

text: coastal sea water

text: sea grass bed

characteristic: environment (material)

text: Yes

characteristic: environmental sample

characteristic: envo

characteristic: further details

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (longitude)

text: old

text: Zostera marina

characteristic: host species

characteristic: host tax id

text: zostera

text: e

text: uncultured eukaryote

text: triquet

text: uncultured eukaryote

text: Illumina MiSeq

text: yes


zostqsoldb

characteristic: DNA extraction plate

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF BRITISH COLUMBIA

text: public

characteristic: INSDC status

characteristic: SRA accession

text: zostqsoldb

text: TTACTTATCCGA

characteristic: barcodesequence

characteristic: collection date

characteristic: conductivity

text: zostera sample

characteristic: description

characteristic: dissolved oxygen

text: coastal sea water

characteristic: environment (biome)

text: sea grass bed

characteristic: environment (feature)

text: Yes

text: Canada

characteristic: geographic location (latitude)

text: old

characteristic: growth

text: Zostera marina

text: zostera

text: c

text: uncultured eukaryote

characteristic: par

text: triquet

text: uncultured eukaryote

text: Illumina MiSeq

text: yes


zostqsoldc

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: zostqsoldc

characteristic: Submitter Id

text: GTCGCTTGCACA

text: zostera sample

text: coastal sea water

text: sea grass bed

characteristic: environment (material)

text: Yes

characteristic: environmental sample

characteristic: envo

characteristic: further details

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (longitude)

text: old

text: Zostera marina

characteristic: host species

text: zostera

text: a

text: uncultured eukaryote

characteristic: organism

text: triquet

text: uncultured eukaryote

text: Illumina MiSeq

text: yes


zostqsoldd

characteristic: DNA extraction plate

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF BRITISH COLUMBIA

text: public

characteristic: INSDC status

characteristic: SRA accession

text: zostqsoldd

text: TCGCTACAGATG

characteristic: barcodesequence

characteristic: collection date

characteristic: conductivity

text: zostera sample

characteristic: description

characteristic: dissolved oxygen

text: coastal sea water

characteristic: environment (biome)

text: sea grass bed

characteristic: environment (feature)

text: Yes

text: Canada

characteristic: geographic location (latitude)

text: old

characteristic: growth

text: Zostera marina

characteristic: host tax id

text: zostera

text: d

text: uncultured eukaryote

text: triquet

text: uncultured eukaryote

text: Illumina MiSeq

text: yes


zostqsolde

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: zostqsolde

characteristic: Submitter Id

text: ACGTATTCGAAG

text: zostera sample

text: coastal sea water

text: sea grass bed

characteristic: environment (material)

text: Yes

characteristic: environmental sample

characteristic: envo

characteristic: further details

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (longitude)

text: old

text: Zostera marina

characteristic: host species

text: zostera

text: b

text: uncultured eukaryote

characteristic: par

text: triquet

text: uncultured eukaryote

text: Illumina MiSeq

text: yes


zostqsoldf

characteristic: DNA extraction plate

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF BRITISH COLUMBIA

text: public

characteristic: INSDC status

characteristic: SRA accession

text: zostqsoldf

text: GCTGCGTATACC

characteristic: barcodesequence

characteristic: collection date

characteristic: conductivity

text: zostera sample

characteristic: description

characteristic: dissolved oxygen

text: coastal sea water

characteristic: environment (biome)

text: sea grass bed

characteristic: environment (feature)

text: Yes

text: Canada

characteristic: geographic location (latitude)

text: old

characteristic: growth

text: Zostera marina

text: zostera

text: f

text: uncultured eukaryote

characteristic: organism

text: triquet

text: uncultured eukaryote

text: Illumina MiSeq

text: yes


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:Chengdu research base of giant panda breeding

characteristic: Submitter Id

text: giant panda

text: gut

text: fecal

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: metagenome

text: Study for giant panda gut microbiota and cellulose digestion mechanism

characteristic: project name

text: metagenome

text: Illumina HiSeq

characteristic: sequencing method

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Chengdu research base of giant panda breeding

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

text: giant panda

characteristic: environment (biome)

text: gut

characteristic: environment (feature)

text: fecal

text: China

characteristic: geographic location (latitude)

text: host-associated

text: metagenome

text: metagenome

text: metagenome

text: Illumina HiSeq


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CNGB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Four leaf with one shoot apices

characteristic: age

text: CNSA

characteristic: broker name

text: cucumber

characteristic: common name

text: European greenhouse cultivar

characteristic: cultivar

text: Shanghai, China

characteristic: geo loc name

text: Cucumis sativus

characteristic: organism

text: Cucumis sativus

text: Shoot apices

characteristic: tissue


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: CNGB

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Four leave with one shoot apices

text: CNSA

text: cucumber

text: European greenhouse cultivar

text: Shanghai, China

text: Cucumis sativus

text: Cucumis sativus

text: Shoot apices


characteristic: ENA-LAST-UPDATE

text: public

tag: Namespace:Insititute of Genetics and Developmental Biology, Chinese academy of Sciences

text: rice

text: The ChIP-seq experiment was used to explore the downstream genes and binding components of NGR2.

characteristic: description

text: SNPs in the promoter of NGR2 could regulate the expression of itself.

characteristic: genetic modification

text: Transcription factor, NGR2

characteristic: genotype

text: Anti-Flag is used for ChIP assay.

characteristic: immunoprecipitate

text: Oryza sativa

text: Oryza sativa

text: The ChIP-seq data of NGR2

characteristic: title


characteristic: External Id

text: CNRS / Univ. Lyon 1

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:CNRS / Univ. Lyon 1

characteristic: Submitter Id

text: Silene latifolia

text: Silene latifolia

text: male

characteristic: sex

text: pool of different tissues

characteristic: tissue type


characteristic: ENA-CHECKLIST

text: CBMSO

text: public

text: The complete genome of Mycobacterium hassiacum

text: Mycobacterium hassiacum

characteristic: organism

text: Mycobacterium hassiacum

text: PacBio reads from Mycobacterium hassiacum


characteristic: ENA-FIRST-PUBLIC

text: UNIBE-IG

text: public

characteristic: INSDC status

text: dog

characteristic: common name

text: Leonberger

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Leonberger


characteristic: ENA-LAST-UPDATE

text: UNIBE-IG

text: public

characteristic: SRA accession

text: dog

text: Greater Swiss Mountain Dog

characteristic: description

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Greater Swiss Mountain Dog


text: Institut Pasteur - Bioinformatics and Biostatistics Hub - C3BI, USR 3756 IP CNRS - Paris, France

text: public

tag: Namespace:Institut Pasteur – Bioinformatics and Biostatistics Hub – C3BI, USR 3756 IP CNRS – Paris, France

text: ArrayExpress

characteristic: broker name

text: house mouse

text: Protocols: Mice C57BL/6J mice were purchased from Charles River. Germ-free mice generated from C57BL/6J mice were obtained either from CNRS TAAM UPS44 Orléans, France, or from the Gnotobiology Platform of the Institut Pasteur and kept in isolators. Conventional mice were kept in specific pathogen- free conditions and all the mice used were female. Mice were housed in 10h (dark)/ 14h (light) cycles. All animal experiments were approved by the committee on animal experimentation of the Institut Pasteur and by the French Ministry of Agriculture. For generating ex-GF mice, 10-12 fecal pellets were collected from 4 CONV mice housed in the same cage for 2 weeks, resuspended, and added to about 100 mL of drinking water of GF mice that had been water-deprived over night. This procedure was repeated on 3 consecutive days. On Day 4, cecal content of the 4 CONV mice was collected, resupended in 10 mL of PBS, of which 200ul was administered to the pre-colonised mice by oral gavage. Colonisation efficiency was determined in the cecal content of mice after 4 weeks. Antibiotic treatment of mice: For depletion of the gut flora, conventional C57BL/6J mice were treated with antibiotics as described previously22. In brief, after treatment with amphotericin B (0.1 mg/ml; Sigma Aldrich) for 2-3 days, mice were treated with a solution consisting of 10 mg/mL ampicillin, 5 mg/mL vancomycin 10 mg/mL neomycin, 10 mg/mL metronidazol and 0.1 mg/ml amphotericin-B (all Sigma Aldrich) per os every 12h using a gavage volume of approximately 10 mL/kg body weight for 21 days. The depletion was controlled for by quantitative PCR as described. Total RNAs were prepared using the RNeasy maxi kit (Qiagen) and quality-controlled using RNA 6000 Nano assay (Agilent). Ribodepletion was performed using RiboMinus Transcriptome Isolation Kit (Human/Mouse; Thermo Fisher). anti- m6A immunoprecipitation Immunoprecipitation was performed as previously described 38. Briefly, 3 g of rabbit anti m6A antibody (Synaptic Systems) were bound to 25 l washed Protein G Dynabeads (Thermo Fisher) in immunoprecipitation buffer (1x IPP; 150 mM NaCl, 0.1% NP-40, 10 mM Tris-Cl, pH 7.4) for 30 min at room temperature (RT) and washed twice in 1x IPP. Total (liver) or ribodepleted (cecum) RNA was fragmented using the NEBNext Magnesium RNA fragmentation module (New England Biolabs), purified by ethanol precipitation and quality-controlled using the RNA 6000 pico assay (Agilent). Equal amounts of RNA (4 g for ribodepleted and 200 g for total RNA) were denatured for 2 min at 70°C and adjusted to 1x IPP concentration using 2x IPP. RNA was added to the antibody-bound beads and incubated for 2h at 4°C in the presence of murine RNase inhibitor (New England Biolabs). The bound RNA was washed twice with 1x IPP, twice with low salt IPP buffer (50 mM NaCl, 0.1% NP40, 10 mN Tris-Cl pH 7.4), twice with high salt IPP buffer (500 mM NaCl, 0.1% NP40, 10 mN Tris-Cl pH 7.4) and once more in 1x IPP. RNA was eluted using 30 l of buffer RLT (Qiagen). 20 l of MyOne Silane Dynabeads (Thermo Fisher) were washed with RLT and resuspended in 30 l of RLT. Eluted RNA was bound to the beads in the presence of 35 l of absolute ethanol, washed twice in 70% ethanol and eluted in 100 l of H20. RNA was purified and concentrated using RNA clean & concentrator (Zymo research) before proceeding to library preparation. 150 ng of input RNA and the immunoprecipitated RNAs were dephosphorylated using antarctic phosphatase and subjected to T4 PNK treatment (both New England Biolabs).

text: adult

characteristic: developmental stage

text: conventional

characteristic: growth condition

characteristic: individual

text: Mus musculus

text: Mus musculus

text: cecum

characteristic: organism part

characteristic: replicate

text: Mus musculus

characteristic: sequencing

text: female

text: antibiotics treatment

characteristic: stimulus

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: ArrayExpress

text: house mouse

text: adult

text: conventional

text: Mus musculus

text: Mus musculus

text: cecum

text: Mus musculus

text: female

characteristic: sex

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

characteristic: description

text: adult

text: conventional

text: Mus musculus

characteristic: organism

text: Mus musculus

text: liver

text: Mus musculus

text: female


text: public

text: ArrayExpress

text: house mouse

text: adult

characteristic: developmental stage

text: germ-free

characteristic: growth condition

characteristic: individual

text: Mus musculus

text: Mus musculus

text: cecum

characteristic: organism part

characteristic: replicate

text: Mus musculus

characteristic: sequencing

text: female

text: colonisation with the flora of conventional mice

characteristic: stimulus

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: ArrayExpress

text: house mouse

text: adult

text: germ-free

text: Mus musculus

text: Mus musculus

text: cecum

text: Mus musculus

text: female

characteristic: sex

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

characteristic: description

text: adult

text: germ-free

text: Mus musculus

characteristic: organism

text: Mus musculus

text: liver

text: Mus musculus

text: female


text: Geogentics

text: public

characteristic: collection date

text: Denmark

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

characteristic: isolate

text: Rectal swab

characteristic: isolation source

text: Enterococcus faecium

text: Enterococcus faecium

text: ST17 slv vancomycin variable isolate


characteristic: ENA-CHECKLIST

characteristic: External Id

text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: DTU Bioinformatics

text: L.Dynowski

characteristic: collected by

text: No

characteristic: environmental sample

text: Afghanistan

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: healthy

text: unidentified

text: Yes

characteristic: is the sequenced pathogen host associated?

text: demo

text: Food

characteristic: isolation source host associated

text: unidentified

text: unidentified

text: demo

characteristic: strain


All

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: INSDC status

characteristic: SRA accession

text: All

text: metagenome

characteristic: organism

text: metagenome

text: Rhizoden

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: CHINA AGRICULTRAL UNIVERSITY

characteristic: INSDC center name

text: public

tag: Namespace:CHINA AGRICULTRAL UNIVERSITY

characteristic: collection date

characteristic: description

text: grassland

characteristic: environment (biome)

text: plateau

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

text: metagenome

characteristic: investigation type

text: soil metagenome

text: grassland soil

characteristic: project name

text: soil metagenome

text: pyrosequencig

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: grassland soil microbial community composition


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: LIV

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: liver fluke

characteristic: common name

text: Fasciola hepatica

characteristic: organism

text: Fasciola hepatica

text: Shrewsbury

characteristic: strain

text: Fasciola adult Shresbury


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Vered Kunik - bioinformatics consulting

characteristic: INSDC center name

text: public

tag: Namespace:Vered Kunik - bioinformatics consulting

text: ArrayExpress

characteristic: broker name

text: honey bee

text: Protocols: Royal jelly was collected from queen brood cells containing 3 days old larvae, and worker jelly was collected from 5 days old worker larvae brood cells; all brood belonged to untreated healthy looking hives. The jelly samples were immediately frozen in liquid nitrogen and kept at -80°C for further analysis. Total RNA extracted from worker and royal jellies was subjected to Tobacco Acid Pyrophosphatase (TAP) treatment using the Cap-Clip enzyme (CellScript). Modified RNA was purified again by standard Phenol/Chloroform extraction followed by Ethanol precipitation in the presence of Glycogen. The RNA pellet was taken up in 12 ul nuclease-free water. RNA quality and quantity was verified using Agilent RNA 6000 pico chip on a Bioanalyzer 2100 instrument. Full-length RNA libraries were prepared using the NEXTflex small RNA-seq kit v3 (Bioo Scientific) according to the manufacturer’s instructions with the following modifications; Adaptor ligation was performed at 16°C overnight (step A). The bead cleanup (step F) was performed following an amended one-sided purification protocol to retain also long fragments (no size selection protocol) as provided by the manufacturer. The final purification of the PCR product (step H1) followed also the amended protocol without size selection as provided by the manufacturer.

characteristic: description

text: Apis mellifera

text: Apis mellifera

text: royal jelly

characteristic: organism part

text: Apis mellifera

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: Vered Kunik - bioinformatics consulting

text: public

text: ArrayExpress

text: honey bee

text: Apis mellifera

text: Apis mellifera

text: worker jelly

text: Apis mellifera


characteristic: ENA-LAST-UPDATE

text: UCSDMI

text: public

characteristic: anonymized name

text: 2017-03-02 20:05

characteristic: collection date

text: 2017-03-02 20:05

characteristic: collection month

text: 2017-03-02 20:05

characteristic: collection season

text: 2017-03-02 20:05

characteristic: collection time

text: 2017-03-02 20:05

text: UK

characteristic: country

text: food sample AGP Swab of unpasteurised cheese

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: manufactured product

characteristic: env feature

text: misc environment

characteristic: env package

text: food product

text: UK:London

characteristic: geo loc name

text: TRUE

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: food metagenome

text: UCSDMI

text: TRUE

text: TRUE

characteristic: public

text: food product

characteristic: sample type

text: food metagenome

text: American Gut Project


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 2017-03-02 20:10

text: 2017-03-02 20:10

text: 2017-03-02 20:10

text: 2017-03-02 20:10

text: 2017-03-02 20:10

text: UK

text: food sample AGP swab of sourdough bread

characteristic: description

text: TRUE

text: urban biome

text: manufactured product

text: misc environment

text: food product

text: UK:London

text: TRUE

text: food metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: TRUE

text: food product

text: food metagenome

text: American Gut Project

characteristic: title


text: UCSDMI

text: public

characteristic: anonymized name

text: 2017-03-02 20:00

characteristic: collection date

text: 2017-03-02 20:00

characteristic: collection month

text: 2017-03-02 20:00

characteristic: collection season

text: 2017-03-02 20:00

characteristic: collection time

text: 2017-03-02 20:00

text: UK

characteristic: country

text: food sample AGP swab of kefir

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: manufactured product

characteristic: env feature

text: misc environment

characteristic: env package

text: food product

text: UK:London

characteristic: geo loc name

text: TRUE

characteristic: host subject id

characteristic: latitude

text: food metagenome

text: UCSDMI

text: TRUE

text: TRUE

text: food product

text: food metagenome

text: American Gut Project


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 2017-03-02 20:00

text: 2017-03-02 20:00

text: 2017-03-02 20:00

text: 2017-03-02 20:00

text: 2017-03-02 20:00

text: UK

text: food sample AGP swab of kefir 2

text: TRUE

text: urban biome

text: manufactured product

text: misc environment

text: food product

text: UK:London

text: TRUE

characteristic: longitude

text: food metagenome

text: UCSDMI

text: TRUE

text: TRUE

characteristic: public

text: food product

characteristic: sample type

text: food metagenome

text: American Gut Project


text: UCSDMI

text: public

characteristic: anonymized name

text: 2017-03-02 20:05

characteristic: collection date

text: 2017-03-02 20:05

characteristic: collection month

text: 2017-03-02 20:05

characteristic: collection season

text: 2017-03-02 20:05

characteristic: collection time

text: 2017-03-02 20:05

text: UK

characteristic: country

text: food sample AGP swab of kimchi

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: manufactured product

characteristic: env feature

text: misc environment

characteristic: env package

text: food product

text: UK:London

text: TRUE

text: food metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: TRUE

text: food product

text: food metagenome

text: American Gut Project

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 2017-03-02 20:05

text: 2017-03-02 20:05

text: 2017-03-02 20:05

text: 2017-03-02 20:05

text: 2017-03-02 20:05

text: UK

text: food sample AGP swab of sourdough starter culture 1

text: TRUE

text: urban biome

text: manufactured product

text: misc environment

text: food product

text: UK:London

characteristic: geo loc name

text: TRUE

characteristic: host subject id

characteristic: latitude

text: food metagenome

text: UCSDMI

text: TRUE

text: TRUE

text: food product

text: food metagenome

text: American Gut Project


text: UCSDMI

text: public

characteristic: anonymized name

text: 2017-03-02 20:15

characteristic: collection date

text: 2017-03-02 20:15

characteristic: collection month

text: 2017-03-02 20:15

characteristic: collection season

text: 2017-03-02 20:15

characteristic: collection time

text: 2017-03-02 20:15

text: UK

characteristic: country

text: food sample AGP swab of water kefir

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: manufactured product

characteristic: env feature

text: misc environment

text: food product

text: UK:London

text: TRUE

characteristic: longitude

text: food metagenome

text: UCSDMI

text: TRUE

text: TRUE

characteristic: public

text: food product

characteristic: sample type

text: food metagenome

text: American Gut Project


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 2017-03-02 20:15

text: 2017-03-02 20:15

text: 2017-03-02 20:15

text: 2017-03-02 20:15

text: 2017-03-02 20:15

text: UK

text: food sample AGP swab of probiotic chocolate

text: TRUE

text: urban biome

text: manufactured product

text: misc environment

characteristic: env package

text: food product

text: UK:London

text: TRUE

text: food metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: TRUE

text: food product

text: food metagenome

text: American Gut Project

characteristic: title


text: UCSDMI

text: public

characteristic: anonymized name

text: 2017-03-02 20:15

characteristic: collection date

text: 2017-03-02 20:15

characteristic: collection month

text: 2017-03-02 20:15

characteristic: collection season

text: 2017-03-02 20:15

characteristic: collection time

text: 2017-03-02 20:15

text: UK

characteristic: country

text: food sample AGP swab of commercial cheese spread

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: manufactured product

characteristic: env feature

text: misc environment

text: food product

text: UK:London

characteristic: geo loc name

text: TRUE

characteristic: host subject id

characteristic: latitude

text: food metagenome

text: UCSDMI

text: TRUE

text: TRUE

text: food product

text: food metagenome

text: American Gut Project


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 2017-03-02 20:15

text: 2017-03-02 20:15

text: 2017-03-02 20:15

text: 2017-03-02 20:15

text: 2017-03-02 20:15

text: UK

text: food sample AGP swab of yoghurt

text: TRUE

text: urban biome

text: manufactured product

text: misc environment

text: food product

text: UK:London

text: TRUE

characteristic: longitude

text: food metagenome

text: UCSDMI

text: TRUE

text: TRUE

characteristic: public

text: food product

characteristic: sample type

text: food metagenome

text: American Gut Project


text: public

tag: Namespace:ZOOLOGY DEPARTMENT, UNIVERSITY OF OXFORD

text: Human cytomegalovirus

characteristic: common name

text: Human betaherpesvirus 5

characteristic: organism

text: Human betaherpesvirus 5

characteristic: title


text: IBPS

text: public

text: fruit fly

characteristic: description

text: adult

characteristic: dev stage

text: Drosophila melanogaster

text: Drosophila melanogaster

text: female

characteristic: sex

text: ovary

characteristic: tissue type

text: small RNA (18-30nt) sequencing


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IBPS

text: public

text: fruit fly

text: BX2OFF, P(PZ)/Cy

text: adult

text: Drosophila melanogaster

text: Drosophila melanogaster

text: female

text: ovary

text: small RNA (18-30nt) sequencing


text: IBPS

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: fruit fly

text: BX2theta, P(PZ)/Cy

text: adult

text: Drosophila melanogaster

text: Drosophila melanogaster

text: female

text: ovary

text: small RNA (18-30nt) sequencing


text: IBPS

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: fruit fly

text: BX2OFF/Cy at 25°C

text: adult

text: Drosophila melanogaster

text: Drosophila melanogaster

text: female

text: ovary

text: small RNA (18-30nt) sequencing


text: IBPS

text: public

text: fruit fly

characteristic: common name

text: BX2OFF/Cy at 29°C

text: adult

text: Drosophila melanogaster

text: Drosophila melanogaster

text: female

text: ovary

text: small RNA (18-30nt) sequencing


text: UCSDMI

text: public

characteristic: day

text: true

characteristic: elevation

text: Host-asssociated

text: Plant

text: Plant corpus

text: Endo

text: urban biome

characteristic: env biome

text: plant-associated habitat

characteristic: env feature

text: plant-associated

characteristic: env package

text: organic material

text: Germany:Cologne

characteristic: geo loc name

text: thale cress

characteristic: host common name

text: Arabidopsis thaliana

characteristic: host scientific name

text: plant 1

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

text: Pul

characteristic: location

characteristic: longitude

characteristic: month

text: I

characteristic: observed

text: plant metagenome

characteristic: organism

text: MPIPZ Cologne

text: false

text: Leaf Endophytes

characteristic: sample type

text: plant metagenome

characteristic: year


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: day

characteristic: description

text: true

characteristic: elevation

text: Host-asssociated

text: Plant

text: Plant corpus

text: Endo

text: urban biome

text: plant-associated habitat

text: plant-associated

text: organic material

text: Germany:Cologne

text: thale cress

text: Arabidopsis thaliana

text: plant 10

text: Pul

text: I

text: plant metagenome

text: MPIPZ Cologne

text: false

text: Leaf Endophytes

text: plant metagenome

characteristic: title


text: UCSDMI

text: public

text: true

text: Host-asssociated

text: Plant

text: Plant corpus

text: Endo

text: urban biome

characteristic: env biome

text: plant-associated habitat

characteristic: env feature

text: plant-associated

characteristic: env package

text: organic material

text: Germany:Cologne

characteristic: geo loc name

text: thale cress

characteristic: host common name

text: Arabidopsis thaliana

characteristic: host scientific name

text: plant 2

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

text: Pul

characteristic: location

characteristic: longitude

characteristic: month

text: I

characteristic: observed

text: plant metagenome

characteristic: organism

text: MPIPZ Cologne

text: false

text: Leaf Endophytes

text: plant metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: day

characteristic: description

text: true

text: Host-asssociated

text: Plant

text: Plant corpus

text: Endo

text: urban biome

text: plant-associated habitat

text: plant-associated

text: organic material

text: Germany:Cologne

text: thale cress

text: Arabidopsis thaliana

text: plant 3

text: Pul

text: I

text: plant metagenome

text: MPIPZ Cologne

text: false

text: Leaf Endophytes

characteristic: sample type

text: plant metagenome

characteristic: year


text: UCSDMI

text: public

text: true

characteristic: elevation

text: Host-asssociated

text: Plant

text: Plant corpus

text: Endo

text: urban biome

characteristic: env biome

text: plant-associated habitat

characteristic: env feature

text: plant-associated

characteristic: env package

text: organic material

text: Germany:Cologne

characteristic: geo loc name

text: thale cress

characteristic: host common name

text: Arabidopsis thaliana

characteristic: host scientific name

text: plant 4

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

text: Pul

characteristic: location

characteristic: longitude

characteristic: month

text: I

text: plant metagenome

text: MPIPZ Cologne

text: false

text: Leaf Endophytes

text: plant metagenome

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: day

characteristic: description

text: true

text: Host-asssociated

text: Plant

text: Plant corpus

text: Endo

text: urban biome

text: plant-associated habitat

text: plant-associated

text: organic material

text: Germany:Cologne

text: thale cress

text: Arabidopsis thaliana

text: plant 5

text: Gey

text: I

characteristic: observed

text: plant metagenome

characteristic: organism

text: MPIPZ Cologne

text: false

text: Leaf Endophytes

text: plant metagenome


text: UCSDMI

text: public

text: true

characteristic: elevation

text: Host-asssociated

text: Plant

text: Plant corpus

text: Endo

text: urban biome

characteristic: env biome

text: plant-associated habitat

characteristic: env feature

text: plant-associated

characteristic: env package

text: organic material

text: Germany:Cologne

characteristic: geo loc name

text: thale cress

characteristic: host common name

text: Arabidopsis thaliana

characteristic: host scientific name

text: plant 6

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

text: Gey

characteristic: location

characteristic: longitude

text: U

text: plant metagenome

text: MPIPZ Cologne

text: false

text: Leaf Endophytes

characteristic: sample type

text: plant metagenome

characteristic: year


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: day

characteristic: description

text: true

text: Host-asssociated

text: Plant

text: Plant corpus

text: Endo

text: urban biome

text: plant-associated habitat

text: plant-associated

text: organic material

text: Germany:Cologne

text: thale cress

text: Arabidopsis thaliana

text: plant 7

text: Pul

characteristic: month

text: U

text: plant metagenome

text: MPIPZ Cologne

text: false

text: Leaf Endophytes

text: plant metagenome

characteristic: title


text: UCSDMI

text: public

text: true

characteristic: elevation

text: Host-asssociated

text: Plant

text: Plant corpus

text: Endo

text: urban biome

characteristic: env biome

text: plant-associated habitat

characteristic: env feature

text: plant-associated

characteristic: env package

text: organic material

text: Germany:Cologne

characteristic: geo loc name

text: thale cress

characteristic: host common name

text: Arabidopsis thaliana

characteristic: host scientific name

text: plant 8

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

text: Pul

characteristic: location

characteristic: longitude

text: U

characteristic: observed

text: plant metagenome

characteristic: organism

text: MPIPZ Cologne

text: false

text: Leaf Endophytes

text: plant metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: day

characteristic: description

text: true

text: Host-asssociated

text: Plant

text: Plant corpus

text: Endo

text: urban biome

text: plant-associated habitat

text: plant-associated

text: organic material

text: Germany:Cologne

text: thale cress

text: Arabidopsis thaliana

text: plant 9

text: Pul

text: I

text: plant metagenome

text: MPIPZ Cologne

text: false

text: Leaf Endophytes

characteristic: sample type

text: plant metagenome

characteristic: year


text: UCSDMI

text: public

text: months

characteristic: age units

characteristic: anonymized name

text: TRUE

characteristic: elevation

text: Control

text: Negative

text: Sterile water blank

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: misc environment

characteristic: env package

text: sterile water

text: USA:CO:Boulder

characteristic: geo loc name

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: metagenome

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: control blank

text: metagenome

characteristic: title

text: Suppression of the gut microbiome with broad-spectrum antibiotics reverses age-related arterial dysfunction


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: months

text: TRUE

text: Control

text: Negative

text: Sterile water blank

text: urban biome

text: research facility

text: misc environment

text: sterile water

text: USA:CO:Boulder

text: metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

text: control blank

text: metagenome


text: UCSDMI

text: public

characteristic: age

text: months

characteristic: age units

characteristic: anonymized name

text: not provided

characteristic: arr

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: not provided

characteristic: description

text: rodent chow

characteristic: diet

text: TRUE

characteristic: elevation

text: Host-asssociated

text: Animal

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: not provided

characteristic: epr

text: not provided

characteristic: errtime

text: no exercize

characteristic: exercise status

text: USA:CO:Boulder

characteristic: geo loc name

text: not provided

characteristic: gripstrength

text: mouse

characteristic: host common name

text: adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: not provided

characteristic: host weight

text: not provided

characteristic: ip

text: adult

characteristic: life stage

text: not provided

text: no

characteristic: nmn

text: not provided

text: mouse gut metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

text: Pre-Exercise

characteristic: treatment

text: OC

characteristic: treatment group

text: g


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: months

characteristic: age units

characteristic: anonymized name

text: not provided

characteristic: arr

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: description

text: rodent chow

characteristic: diet

text: TRUE

characteristic: elevation

text: Host-asssociated

text: Animal

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

characteristic: epr

text: not provided

text: no exercize

text: USA:CO:Boulder

text: not provided

text: mouse

text: adult

text: Mus musculus

characteristic: host subject id

text: not provided

characteristic: latitude

text: adult

characteristic: longitude

text: not provided

text: no

text: not provided

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: feces

text: mouse gut metagenome

text: male

characteristic: title

text: Pre-Exercise

text: OC

text: g


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: months

characteristic: age units

characteristic: anonymized name

text: not provided

characteristic: arr

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: not provided

text: rodent chow

text: TRUE

text: Host-asssociated

text: Animal

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: not provided

text: not provided

characteristic: errtime

text: no exercize

characteristic: exercise status

text: USA:CO:Boulder

characteristic: geo loc name

text: not provided

characteristic: gripstrength

text: mouse

characteristic: host common name

text: adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: not provided

characteristic: host weight

text: not provided

characteristic: ip

text: adult

characteristic: life stage

text: not provided

text: no

characteristic: nmn

text: not provided

text: mouse gut metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

text: Pre-Exercise

characteristic: treatment

text: OC

characteristic: treatment group

text: g


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: months

characteristic: age units

characteristic: anonymized name

text: not provided

characteristic: arr

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: not provided

characteristic: description

text: rodent chow

characteristic: diet

text: TRUE

characteristic: elevation

text: Host-asssociated

text: Animal

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

characteristic: epr

text: not provided

text: no exercize

text: USA:CO:Boulder

text: not provided

text: mouse

text: adult

text: Mus musculus

characteristic: host subject id

text: not provided

text: not provided

characteristic: latitude

text: adult

characteristic: longitude

text: not provided

text: no

text: not provided

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: feces

text: mouse gut metagenome

text: male

characteristic: title

text: Pre-Exercise

text: OC

text: g


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: months

characteristic: age units

characteristic: anonymized name

text: not provided

characteristic: arr

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rodent chow

text: TRUE

text: Host-asssociated

text: Animal

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: not provided

characteristic: errtime

text: no exercize

characteristic: exercise status

text: USA:CO:Boulder

characteristic: geo loc name

text: not provided

characteristic: gripstrength

text: mouse

characteristic: host common name

text: adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

characteristic: host weight

text: not provided

characteristic: ip

text: adult

characteristic: life stage

text: not provided

text: no

characteristic: nmn

text: not provided

text: mouse gut metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

text: Pre-Exercise

characteristic: treatment

text: OC

characteristic: treatment group

text: g


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: months

characteristic: age units

characteristic: anonymized name

text: not provided

characteristic: arr

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: description

text: rodent chow

characteristic: diet

text: TRUE

characteristic: elevation

text: Host-asssociated

text: Animal

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: not provided

characteristic: epr

text: not provided

text: no exercize

text: USA:CO:Boulder

text: not provided

text: mouse

text: adult

text: Mus musculus

characteristic: host subject id

text: not provided

characteristic: latitude

text: adult

characteristic: longitude

text: not provided

text: no

text: not provided

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: feces

text: mouse gut metagenome

text: male

characteristic: title

text: Pre-Exercise

text: OC

text: g


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: months

characteristic: age units

characteristic: anonymized name

text: not provided

characteristic: arr

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rodent chow

text: TRUE

text: Host-asssociated

text: Animal

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: not provided

text: not provided

characteristic: errtime

text: no exercize

characteristic: exercise status

text: USA:CO:Boulder

characteristic: geo loc name

text: not provided

characteristic: gripstrength

text: mouse

characteristic: host common name

text: adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

characteristic: host weight

text: not provided

characteristic: ip

text: adult

characteristic: life stage

text: not provided

text: no

characteristic: nmn

text: not provided

text: mouse gut metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

text: Pre-Exercise

characteristic: treatment

text: OC

characteristic: treatment group

text: g


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: months

characteristic: age units

characteristic: anonymized name

text: not provided

text: not provided

characteristic: arr

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: C1081.Old.control.time.matched.with.NMN.study

characteristic: description

text: rodent chow

characteristic: diet

text: TRUE

characteristic: elevation

text: Host-asssociated

text: Animal

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: not provided

characteristic: epr

text: not provided

text: no exercize

text: USA:CO:Boulder

text: not provided

text: mouse

text: adult

text: Mus musculus

characteristic: host subject id

text: not provided

characteristic: latitude

text: adult

characteristic: longitude

text: not provided

text: no

text: not provided

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: feces

text: mouse gut metagenome

text: male

characteristic: title

text: Old control-time-matched with NMN study

text: OC

text: g


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: months

characteristic: age units

characteristic: anonymized name

text: not provided

text: not provided

characteristic: arr

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rodent chow

text: TRUE

text: Host-asssociated

text: Animal

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: not provided

characteristic: errtime

text: no exercize

characteristic: exercise status

text: USA:CO:Boulder

characteristic: geo loc name

text: not provided

characteristic: gripstrength

text: mouse

characteristic: host common name

text: adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

characteristic: host weight

text: not provided

characteristic: ip

text: adult

characteristic: life stage

text: not provided

text: no

characteristic: nmn

text: not provided

text: mouse gut metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

text: Time-matched with NMN

characteristic: treatment

text: OC

characteristic: treatment group

text: g


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: months

characteristic: age units

characteristic: anonymized name

text: not provided

text: not provided

characteristic: arr

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: C1082.Old.control.time.matched.with.NMN.study

characteristic: description

text: rodent chow

characteristic: diet

text: TRUE

characteristic: elevation

text: Host-asssociated

text: Animal

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: not provided

characteristic: epr

text: not provided

text: no exercize

text: USA:CO:Boulder

text: not provided

text: mouse

text: adult

text: Mus musculus

characteristic: host subject id

text: not provided

characteristic: latitude

text: adult

characteristic: longitude

text: not provided

text: no

text: not provided

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: feces

text: mouse gut metagenome

text: male

characteristic: title

text: Old control-time-matched with NMN study

text: OC

text: g


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: months

characteristic: age units

characteristic: anonymized name

text: not provided

text: not provided

characteristic: arr

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: C1084.Old.control.time.matched.with.NMN.study

text: rodent chow

text: TRUE

text: Host-asssociated

text: Animal

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: not provided

text: not provided

characteristic: errtime

text: no exercize

characteristic: exercise status

text: USA:CO:Boulder

characteristic: geo loc name

text: not provided

characteristic: gripstrength

text: mouse

characteristic: host common name

text: adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

characteristic: host weight

text: not provided

characteristic: ip

text: adult

characteristic: life stage

text: not provided

text: no

characteristic: nmn

text: not provided

text: mouse gut metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

text: Old control-time-matched with NMN study

characteristic: treatment

text: OC

characteristic: treatment group

text: g


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: months

characteristic: age units

characteristic: anonymized name

text: not provided

text: not provided

characteristic: arr

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: description

text: rodent chow

characteristic: diet

text: TRUE

characteristic: elevation

text: Host-asssociated

text: Animal

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

characteristic: epr

text: not provided

text: no exercize

text: USA:CO:Boulder

text: not provided

text: mouse

text: adult

text: Mus musculus

characteristic: host subject id

text: not provided

characteristic: latitude

text: adult

characteristic: longitude

text: not provided

text: no

text: not provided

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: feces

text: mouse gut metagenome

text: male

characteristic: title

text: Time-matched with NMN

text: OC

text: g


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: months

characteristic: age units

characteristic: anonymized name

text: not provided

text: not provided

characteristic: arr

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: C1085.Old.control.time.matched.with.NMN.study

text: rodent chow

text: TRUE

text: Host-asssociated

text: Animal

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: not provided

text: not provided

characteristic: errtime

text: no exercize

characteristic: exercise status

text: USA:CO:Boulder

characteristic: geo loc name

text: not provided

characteristic: gripstrength

text: mouse

characteristic: host common name

text: adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

characteristic: host weight

text: not provided

characteristic: ip

text: adult

characteristic: life stage

text: not provided

text: no

characteristic: nmn

text: not provided

text: mouse gut metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

text: Old control-time-matched with NMN study

characteristic: treatment

text: OC

characteristic: treatment group

text: g


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: months

characteristic: age units

characteristic: anonymized name

text: not provided

text: not provided

characteristic: arr

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: C1086.Old.control.time.matched.with.NMN.study

characteristic: description

text: rodent chow

characteristic: diet

text: TRUE

characteristic: elevation

text: Host-asssociated

text: Animal

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: not provided

characteristic: epr

text: not provided

text: no exercize

text: USA:CO:Boulder

text: not provided

text: mouse

text: adult

text: Mus musculus

characteristic: host subject id

text: not provided

characteristic: latitude

text: adult

characteristic: longitude

text: not provided

text: no

text: not provided

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: feces

text: mouse gut metagenome

text: male

characteristic: title

text: Old control-time-matched with NMN study

text: OC

text: g


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: months

characteristic: age units

characteristic: anonymized name

text: not provided

text: not provided

characteristic: arr

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: C1087.Old.control.time.matched.with.NMN.study

text: rodent chow

text: TRUE

text: Host-asssociated

text: Animal

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: not provided

text: not provided

characteristic: errtime

text: no exercize

characteristic: exercise status

text: USA:CO:Boulder

characteristic: geo loc name

text: not provided

characteristic: gripstrength

text: mouse

characteristic: host common name

text: adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

characteristic: host weight

text: not provided

characteristic: ip

text: adult

characteristic: life stage

text: not provided

text: no

characteristic: nmn

text: not provided

text: mouse gut metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

text: Old control-time-matched with NMN study

characteristic: treatment

text: OC

characteristic: treatment group

text: g


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: months

characteristic: age units

characteristic: anonymized name

text: not provided

text: not provided

characteristic: arr

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: description

text: rodent chow

characteristic: diet

text: TRUE

characteristic: elevation

text: Host-asssociated

text: Animal

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: not provided

characteristic: epr

text: not provided

text: no exercize

text: USA:CO:Boulder

text: not provided

text: mouse

text: adult

text: Mus musculus

characteristic: host subject id

text: not provided

characteristic: latitude

text: adult

characteristic: longitude

text: not provided

text: no

text: not provided

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: feces

text: mouse gut metagenome

text: male

characteristic: title

text: Time-matched with NMN

text: OC

text: g


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: months

characteristic: age units

characteristic: anonymized name

text: not provided

characteristic: arr

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rodent chow

text: TRUE

text: Host-asssociated

text: Animal

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: not provided

characteristic: errtime

text: no exercize

characteristic: exercise status

text: USA:CO:Boulder

characteristic: geo loc name

characteristic: gripstrength

text: mouse

characteristic: host common name

text: adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

characteristic: host weight

text: not provided

characteristic: ip

text: adult

characteristic: life stage

text: not provided

text: yes

characteristic: nmn

text: not provided

text: mouse gut metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

text: Mid NMN

characteristic: treatment

text: ONMN

characteristic: treatment group

text: g


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: months

characteristic: age units

characteristic: anonymized name

text: not provided

characteristic: arr

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: description

text: rodent chow

characteristic: diet

text: TRUE

characteristic: elevation

text: Host-asssociated

text: Animal

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

characteristic: epr

text: no exercize

text: USA:CO:Boulder

text: mouse

text: adult

text: Mus musculus

characteristic: host subject id

text: not provided

characteristic: latitude

text: adult

characteristic: longitude

text: yes

text: not provided

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: feces

text: mouse gut metagenome

text: male

characteristic: title

text: Post-NMN

text: ONMN

text: g


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: months

characteristic: age units

characteristic: anonymized name

text: not provided

characteristic: arr

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rodent chow

text: TRUE

text: Host-asssociated

text: Animal

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: not provided

characteristic: errtime

text: no exercize

characteristic: exercise status

text: USA:CO:Boulder

characteristic: geo loc name

characteristic: gripstrength

text: mouse

characteristic: host common name

text: adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

characteristic: host weight

text: not provided

characteristic: ip

text: adult

characteristic: life stage

text: not provided

text: yes

characteristic: nmn

text: not provided

text: mouse gut metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

text: Mid NMN

characteristic: treatment

text: ONMN

characteristic: treatment group

text: g


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: months

characteristic: age units

characteristic: anonymized name

text: not provided

characteristic: arr

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: description

text: rodent chow

characteristic: diet

text: TRUE

characteristic: elevation

text: Host-asssociated

text: Animal

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: not provided

characteristic: epr

text: no exercize

text: USA:CO:Boulder

text: mouse

text: adult

text: Mus musculus

characteristic: host subject id

text: not provided

characteristic: latitude

text: adult

characteristic: longitude

text: yes

text: not provided

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: feces

text: mouse gut metagenome

text: male

characteristic: title

text: Post-NMN

text: ONMN

text: g


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: months

characteristic: age units

characteristic: anonymized name

text: not provided

characteristic: arr

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rodent chow

text: TRUE

text: Host-asssociated

text: Animal

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: not provided

characteristic: errtime

text: no exercize

characteristic: exercise status

text: USA:CO:Boulder

characteristic: geo loc name

text: not provided

characteristic: gripstrength

text: mouse

characteristic: host common name

text: adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

characteristic: host weight

text: not provided

characteristic: ip

text: adult

characteristic: life stage

text: not provided

text: yes

characteristic: nmn

text: not provided

text: mouse gut metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

text: Post-NMN

characteristic: treatment

text: ONMN

characteristic: treatment group

text: g


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: months

characteristic: age units

characteristic: anonymized name

text: not provided

characteristic: arr

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: description

text: rodent chow

characteristic: diet

text: TRUE

characteristic: elevation

text: Host-asssociated

text: Animal

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

characteristic: epr

text: no exercize

text: USA:CO:Boulder

text: not provided

text: mouse

text: adult

text: Mus musculus

characteristic: host subject id

text: not provided

characteristic: latitude

text: adult

characteristic: longitude

text: yes

text: not provided

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: feces

text: mouse gut metagenome

text: male

characteristic: title

text: Post-NMN

text: ONMN

text: g


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: months

characteristic: age units

characteristic: anonymized name

characteristic: arr

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rodent chow

text: TRUE

text: Host-asssociated

text: Animal

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: not provided

characteristic: errtime

text: no exercize

characteristic: exercise status

text: USA:CO:Boulder

characteristic: geo loc name

characteristic: gripstrength

text: mouse

characteristic: host common name

text: adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

characteristic: host weight

text: not provided

characteristic: ip

text: adult

characteristic: life stage

text: not provided

text: no

characteristic: nmn

text: not provided

text: mouse gut metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

text: Pre-NMN

characteristic: treatment

text: YNMN

characteristic: treatment group

text: g


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: months

characteristic: age units

characteristic: anonymized name

characteristic: arr

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: description

text: rodent chow

characteristic: diet

text: TRUE

characteristic: elevation

text: Host-asssociated

text: Animal

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: not provided

characteristic: epr

text: no exercize

text: USA:CO:Boulder

text: mouse

text: adult

text: Mus musculus

characteristic: host subject id

characteristic: latitude

text: adult

characteristic: longitude

text: yes

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: feces

text: mouse gut metagenome

text: male

characteristic: title

text: Post-NMN

text: YNMN

text: g


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: months

characteristic: age units

characteristic: anonymized name

text: not provided

text: not provided

characteristic: arr

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: not provided

text: rodent chow

text: TRUE

text: Host-asssociated

text: Animal

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: not provided

text: not provided

characteristic: errtime

text: no exercize

characteristic: exercise status

text: USA:CO:Boulder

characteristic: geo loc name

text: not provided

characteristic: gripstrength

text: mouse

characteristic: host common name

text: adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: not provided

characteristic: host weight

text: not provided

characteristic: ip

text: adult

characteristic: life stage

text: not provided

text: no

characteristic: nmn

text: not provided

text: mouse gut metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

text: Pre-NMN

characteristic: treatment

text: YNMN

characteristic: treatment group

text: g


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: months

characteristic: age units

characteristic: anonymized name

characteristic: arr

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

characteristic: description

text: rodent chow

characteristic: diet

text: TRUE

characteristic: elevation

text: Host-asssociated

text: Animal

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: not provided

characteristic: epr

text: no exercize

text: USA:CO:Boulder

text: mouse

text: adult

text: Mus musculus

characteristic: host subject id

characteristic: latitude

text: adult

characteristic: longitude

text: yes

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: feces

text: mouse gut metagenome

text: male

characteristic: title

text: Post-NMN

text: YNMN

text: g


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: months

characteristic: age units

characteristic: anonymized name

characteristic: arr

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rodent chow

text: TRUE

text: Host-asssociated

text: Animal

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: not provided

characteristic: errtime

text: no exercize

characteristic: exercise status

text: USA:CO:Boulder

characteristic: geo loc name

characteristic: gripstrength

text: mouse

characteristic: host common name

text: adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

characteristic: host weight

text: not provided

characteristic: ip

text: adult

characteristic: life stage

text: not provided

text: no

characteristic: nmn

text: not provided

text: mouse gut metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

text: Pre-NMN

characteristic: treatment

text: YNMN

characteristic: treatment group

text: g


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: months

characteristic: age units

characteristic: anonymized name

text: not provided

text: not provided

characteristic: arr

text: UBERON:feces

characteristic: body habitat

text: UBERON:feces

characteristic: body product

text: UBERON:feces

characteristic: body site

text: not provided

characteristic: description

text: rodent chow

characteristic: diet

text: TRUE

characteristic: elevation

text: Host-asssociated

text: Animal

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: not provided

characteristic: epr

text: not provided

text: no exercize

text: USA:CO:Boulder

text: not provided

text: mouse

text: adult

text: Mus musculus

characteristic: host subject id

text: not provided

text: not provided

characteristic: latitude

text: adult

characteristic: longitude

text: not provided

text: no

text: not provided

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: feces

text: mouse gut metagenome

text: male

characteristic: title

text: Pre-Exercise

text: YC

text: g


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: months

characteristic: age units

characteristic: anonymized name

text: not provided

text: not provided

characteristic: arr

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: not provided

text: rodent chow

text: TRUE

text: Host-asssociated

text: Animal

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: not provided

text: not provided

characteristic: errtime

text: exercise

characteristic: exercise status

text: USA:CO:Boulder

characteristic: geo loc name

text: not provided

characteristic: gripstrength

text: mouse

characteristic: host common name

text: adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

characteristic: host taxid

text: not provided

characteristic: host weight

text: not provided

characteristic: ip

text: adult

characteristic: life stage

text: not provided

text: no

characteristic: nmn

text: not provided

text: mouse gut metagenome

text: UCSDMI

text: FALSE

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

text: Post-Exercise

characteristic: treatment

characteristic: treatment group

text: g