E-MTAB-6299:Sample 34

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: INSERM U1170

text: public

characteristic: INSDC status

text: E-MTAB-6299:Sample 34

characteristic: Submitter Id

text: CRp

text: ArrayExpress

text: mononuclear cell

text: relapse during enasidenib treatment

characteristic: clinical information

text: human

characteristic: common name

text: acute myeloid leukemia

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: CD3 positive

text: Homo sapiens

text: male

characteristic: sex

text: Sample 34

characteristic: title


E-MTAB-6299:Sample 40

status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: INSERM U1170

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: E-MTAB-6299:Sample 40

tag: Namespace:INSERM U1170

unit: year

characteristic: age

text: CR

characteristic: best response to enasidenib

text: ArrayExpress

characteristic: broker name

text: mononuclear cell

characteristic: cell type

text: relapse during enasidenib treatment

text: human

text: Protocols: Bone marrow or blood samples from AML patients were collected by the Département d’Innovation Thérapeutique et d’Essais Précoces (DITEP) of Gustave Roussy (Villejuif, France) according to Institutional Review Board-approved protocols. Informed consent was obtained from all patients, in accordance with the Declaration of Helsinki. Mononuclear cells were isolated by Ficoll density gradient, resuspended in 90% FCS/10% DMSO solution and viably frozen in liquid nitrogen. After thawing, cells were washed with DPBS (Gibco) supplemented with 2% FBS, stained with the PE-Cy7-conjugated anti-human CD45 antibody (clone HI30, BD Biosciences), the FITC-conjugated anti-human CD3 antibody (clone HIT3a, Biolegend) and the APC-conjugated anti-human CD34 (clone 581, BD Biosciences) antibody, and sorted using a BD Influx Cell Sorter (BD Biosciences). The treatment protocol is detailed in publications here: Stein, E. M. et al. Enasidenib in mutant IDH2 relapsed or refractory acute myeloid leukemia. Blood 130, 722-731, doi:10.1182/blood-2017-04-779405 (2017) and Amatangelo, M. D. et al. Enasidenib induces acute myeloid leukemia cell differentiation to promote clinical response. Blood 130, 732-741, doi:10.1182/blood-2017-04-779447 (2017). Regarding the time point of enasidenib treatment: the C in C10D1 stands for cycle. The D stands for Day. One cycle is defined as a 28 days-long period of treatment. C1D1 refers to the first day of treatment. C2D15 would refer to the 15th day within the second cycle of treatment, meaning 43 days total. Characteristic[bet response to enasidenib] is defined as: PR stands for partial response; CR stands for complete response; MLFS stands for morphologic leukemia-free state; CRp stands for CR with incomplete platelet recovery. Genomic DNA from FACS-sorted AML blasts or CD3-positive cells was purified using the Allprep DNA/RNA mini or micro Kits (Qiagen), according to the protocol provided by the manufacturer. Purified genomic DNA was fragmented by sonication. Exome capture was performed with the SureSelect V5 Mb All Exon kit (Agilent), according to the protocol provided by the manufacturer.

characteristic: description

text: acute myeloid leukemia

characteristic: disease

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: CD3 positive

characteristic: phenotype

text: Homo sapiens

text: female

text: Pre-treatment

characteristic: time point of enasidenib treatment

text: Sample 40


E-MTAB-6299:Sample 6

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: INSERM U1170

text: public

characteristic: INSDC status

text: E-MTAB-6299:Sample 6

characteristic: Submitter Id

text: MLFS

text: ArrayExpress

text: mononuclear cell

text: relapse during enasidenib treatment

characteristic: clinical information

text: human

characteristic: common name

text: acute myeloid leukemia

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: CD3 positive

text: Homo sapiens

text: female

characteristic: sex

text: Pre-treatment

text: Sample 6

characteristic: title


E-MTAB-6299:Sample 9

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: INSERM U1170

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: E-MTAB-6299:Sample 9

characteristic: age

text: CR

characteristic: best response to enasidenib

text: ArrayExpress

characteristic: broker name

text: mononuclear cell

text: relapse during enasidenib treatment

text: human

text: acute myeloid leukemia

text: Homo sapiens

text: Homo sapiens

text: blood

text: CD3 positive

text: Homo sapiens

text: male

text: Pre-treatment

text: Sample 9


E-MTAB-6299:Sample 22

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: INSERM U1170

text: public

text: E-MTAB-6299:Sample 22

text: CR

text: ArrayExpress

text: mononuclear cell

characteristic: cell type

text: relapse off enasidenib treatment

text: human

characteristic: description

text: acute myeloid leukemia

characteristic: disease

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: CD3 positive

characteristic: phenotype

text: Homo sapiens

text: female

text: Pre-treatment

characteristic: time point of enasidenib treatment

text: Sample 22


E-MTAB-6299:Sample 14

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: INSERM U1170

text: public

characteristic: INSDC status

text: E-MTAB-6299:Sample 14

characteristic: Submitter Id

text: No response

text: ArrayExpress

text: lymphoblast

text: human

characteristic: common name

text: acute myeloid leukemia

text: IDH2 R140Q

characteristic: genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: bone marrow

text: Progressive Disease

characteristic: response status at time point of enasidenib treatment

text: Homo sapiens

text: female

characteristic: sex

text: Sample 14

characteristic: title


E-MTAB-6299:Sample 36

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: INSERM U1170

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: E-MTAB-6299:Sample 36

characteristic: age

text: No response

characteristic: best response to enasidenib

text: ArrayExpress

characteristic: broker name

text: lymphoblast

characteristic: cell type

text: human

text: acute myeloid leukemia

text: IDH2 R140Q

text: Homo sapiens

text: Homo sapiens

text: blood

text: Progressive Disease

text: Homo sapiens

text: female

text: Sample 36


E-MTAB-6299:Sample 46

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: INSERM U1170

text: public

characteristic: INSDC status

text: E-MTAB-6299:Sample 46

characteristic: Submitter Id

text: No response

text: ArrayExpress

text: lymphoblast

text: human

characteristic: description

text: acute myeloid leukemia

characteristic: disease

text: IDH2 R140W

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Progressive Disease

text: Homo sapiens

text: male

characteristic: time point of enasidenib treatment

text: Sample 46


E-MTAB-6299:Sample 11

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: INSERM U1170

characteristic: INSDC center name

text: public

text: E-MTAB-6299:Sample 11

text: PR

text: ArrayExpress

text: lymphoblast

text: relapse during enasidenib treatment

characteristic: clinical information

text: human

characteristic: common name

text: acute myeloid leukemia

text: IDH2 R140Q

characteristic: genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Relapse

characteristic: response status at time point of enasidenib treatment

text: Homo sapiens

text: male

characteristic: sex

text: Sample 11

characteristic: title


E-MTAB-6299:Sample 17

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: INSERM U1170

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6299:Sample 17

characteristic: age

text: CR

characteristic: best response to enasidenib

text: ArrayExpress

characteristic: broker name

text: lymphoblast

characteristic: cell type

text: relapse during enasidenib treatment

text: human

text: acute myeloid leukemia

text: IDH2 R172K

text: Homo sapiens

text: Homo sapiens

text: blood

text: Relapse

text: Homo sapiens

text: female

text: Sample 17


E-MTAB-6299:Sample 2

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: INSERM U1170

characteristic: INSDC center name

text: public

text: E-MTAB-6299:Sample 2

characteristic: Submitter Id

text: PR

text: ArrayExpress

text: lymphoblast

text: relapse during enasidenib treatment

characteristic: clinical information

text: human

characteristic: description

text: acute myeloid leukemia

characteristic: disease

text: IDH2 R172K

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: bone marrow

characteristic: organism part

text: Relapse

text: Homo sapiens

text: female

characteristic: time point of enasidenib treatment

text: Sample 2


E-MTAB-6299:Sample 24

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: INSERM U1170

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-6299:Sample 24

text: PR

text: ArrayExpress

text: lymphoblast

text: relapse during enasidenib treatment

text: human

characteristic: common name

text: acute myeloid leukemia

text: IDH2 R172K

characteristic: genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Relapse

characteristic: response status at time point of enasidenib treatment

text: Homo sapiens

text: male

characteristic: sex

text: Sample 24

characteristic: title


E-MTAB-6299:Sample 27

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: INSERM U1170

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6299:Sample 27

characteristic: Submitter Id

characteristic: age

text: PR

characteristic: best response to enasidenib

text: ArrayExpress

characteristic: broker name

text: lymphoblast

characteristic: cell type

text: relapse during enasidenib treatment

text: human

text: acute myeloid leukemia

text: IDH2 R172K

text: Homo sapiens

text: Homo sapiens

text: blood

text: Relapse

text: Homo sapiens

text: female

text: Sample 27


E-MTAB-6299:Sample 30

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: INSERM U1170

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-6299:Sample 30

text: CRp

text: ArrayExpress

text: lymphoblast

text: relapse during enasidenib treatment

characteristic: clinical information

text: human

characteristic: description

text: acute myeloid leukemia

characteristic: disease

text: IDH2 R140Q

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: bone marrow

characteristic: organism part

text: Relapse

text: Homo sapiens

text: male

characteristic: time point of enasidenib treatment

text: Sample 30


E-MTAB-6299:Sample 33

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: INSERM U1170

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: E-MTAB-6299:Sample 33

text: CRp

text: ArrayExpress

text: lymphoblast

text: relapse during enasidenib treatment

text: human

characteristic: common name

text: acute myeloid leukemia

text: IDH2 R140Q

characteristic: genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Relapse

characteristic: response status at time point of enasidenib treatment

text: Homo sapiens

text: male

characteristic: sex

text: Sample 33

characteristic: title


E-MTAB-6299:Sample 39

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: INSERM U1170

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: E-MTAB-6299:Sample 39

characteristic: Submitter Id

characteristic: age

text: CR

characteristic: best response to enasidenib

text: ArrayExpress

characteristic: broker name

text: lymphoblast

characteristic: cell type

text: relapse during enasidenib treatment

text: human

text: acute myeloid leukemia

text: IDH2 R140Q

text: Homo sapiens

text: Homo sapiens

text: blood

text: Relapse

text: Homo sapiens

text: female

text: Sample 39


E-MTAB-6299:Sample 5

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: INSERM U1170

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: E-MTAB-6299:Sample 5

text: MLFS

text: ArrayExpress

text: lymphoblast

text: relapse during enasidenib treatment

characteristic: clinical information

text: human

characteristic: description

text: acute myeloid leukemia

characteristic: disease

text: IDH2 R140Q

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Relapse

text: Homo sapiens

text: female

characteristic: time point of enasidenib treatment

text: Sample 5


E-MTAB-6299:Sample 8

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: INSERM U1170

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-6299:Sample 8

text: CR

text: ArrayExpress

text: lymphoblast

text: relapse during enasidenib treatment

text: human

characteristic: common name

text: acute myeloid leukemia

text: IDH2 R140Q

characteristic: genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: bone marrow

text: Relapse

characteristic: response status at time point of enasidenib treatment

text: Homo sapiens

text: male

characteristic: sex

text: Sample 8

characteristic: title


E-MTAB-6299:Sample 21

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: INSERM U1170

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6299:Sample 21

characteristic: Submitter Id

characteristic: age

text: CR

characteristic: best response to enasidenib

text: ArrayExpress

characteristic: broker name

text: lymphoblast

characteristic: cell type

text: relapse off enasidenib treatment

text: human

text: acute myeloid leukemia

text: IDH2 R172K

text: Homo sapiens

text: Homo sapiens

text: blood

text: Relapse

text: Homo sapiens

text: female

text: OFF Enasidenib

text: Sample 21


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: CRI-FEM

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: collection date

text: wine grape

text: 19%N; 6 % P2O5; 11 % K2O

characteristic: culture rooting medium

text: Two-year-old plants of the international V.vinifera cultivar Pinot noir V. vinifera were grown in 5-L pots filled with sand-peat mixture (7:3 v/v), regularly watered via a drip system and fertilized twice a year with the controlled release fertilizer (19%N; 6 % P2O5; 11 % K2O; 2 % MgO; 0.5 % Fe) OsmocoteTopdress (ICL Specialty Fertilizers, ICL Italia Treviso), in greenhouse (24 °C, 16-h photoperiod, 70% relative humidity) at the Department of Agricultural and Environmental Sciences in Milan (Italy).

characteristic: description

text: Italy

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: asexual

characteristic: isolation and growth condition

text: Vitis vinifera

text: cultivar

characteristic: organism common name

text: healthy

characteristic: plant developmental stage

characteristic: plant growth medium

text: PO:0007118; 2.06 main shoot and axillary shoots visible at six nodes stage; The stage at which main shoot and axillary shoots at six nodes are visible.

characteristic: plant structure

characteristic: plant treatment

text: plant axis

characteristic: propagation

text: 2 % MgO; 0.5 % Fe

characteristic: rooting medium macronutrients

text: 24 °C

characteristic: rooting medium pH

text: greenhouse

characteristic: sample disease status

text: Vitis vinifera

text: DOI: 10.5073/vitis.2016.55.121-128

characteristic: source material identifiers

text: soil

characteristic: subspecific genetic lineage name

text: pinot noir

characteristic: subspecific genetic lineage rank

text: Pinot noir sample not inoculated.


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CRI-FEM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: wine grape

characteristic: common name

text: 19%N; 6 % P2O5; 11 % K2O

characteristic: culture rooting medium

text: Two-year-old plants of the international V.vinifera cultivar Pinot noir V. vinifera were grown in 5-L pots filled with sand-peat mixture (7:3 v/v), regularly watered via a drip system and fertilized twice a year with the controlled release fertilizer(19%N; 6 % P2O5; 11 % K2O; 2 % MgO; 0.5 % Fe) OsmocoteTopdress (ICL Specialty Fertilizers, ICL Italia Treviso), in greenhouse (24 °C, 16-h photoperiod, 70% relative humidity) at the Department of Agricultural and EnvironmentalSciences in Milan (Italy).

characteristic: description

text: Italy

text: asexual

text: Vitis vinifera

characteristic: organism

text: cultivar

text: healthy

text: plant axis

text: 2 % MgO; 0.5 % Fe

text: 24 °C

text: greenhouse

text: Vitis vinifera

text: DOI: 10.5073/vitis.2016.55.121-128

text: soil

text: pinot noir

text: Pinot noir sample not inoculated.

characteristic: title


text: UNIVERSITY OF BERN

text: public

tag: Namespace:UNIVERSITY OF BERN

text: human

text: patient

text: human body

characteristic: environment (biome)

text: gut

characteristic: environment (feature)

text: stool

characteristic: environment (material)

text: human gut

characteristic: environmental package

text: Switzerland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: Homo sapiens

text: Alterations of the intestinal microbiome in patients with retinal artery occlusion

characteristic: project name

text: Homo sapiens

text: Illumina HiSeq 3000

characteristic: sequencing method

text: sequencing of human metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BERN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: human

text: control

text: human body

text: gut

text: stool

text: human gut

text: Switzerland

text: human-gut

text: metagenome

text: Homo sapiens

text: Homo sapiens

text: Illumina HiSeq 3000

text: sequencing of human metagenome


text: COST Action

text: public

tag: Namespace:COST Action

text: Lyophilized fecal sample

characteristic: bio material

text: UNIBO

characteristic: collected by

text: Yes

characteristic: environmental sample

text: Italy

characteristic: geographic location (country and/or sea)

text: Sus scrofa

characteristic: host scientific name

text: Faeces

characteristic: isolation source

text: pig gut metagenome

characteristic: organism

text: pig gut metagenome

text: PiGutNet Ring Test

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CRI-FEM

text: public

text: 24 celsius degrees

characteristic: air temperature regimen

text: wine grape

characteristic: common name

text: 19%N; 6 % P2O5; 11 % K2O

characteristic: culture rooting medium

text: Two-year-old plants of the international V.vinifera cultivar Pinot noir V. vinifera were grown in 5-L pots filled with sand-peat mixture (7:3 v/v), regularly watered via a drip system and fertilized twice a year with the controlled release fertilizer (19% N; 6 % P2O5; 11 % K2O; 2 % MgO; 0.5 % Fe) OsmocoteTopdress (ICL Specialty Fertilizers, ICL Italia Treviso), in greenhouse (24 °C, 16-h photoperiod, 70% relative humidity) at the Department of Agricultural and Environmental Sciences in Milan (Italy).

characteristic: description

text: Italy

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: asexual

characteristic: isolation and growth condition

characteristic: light regimen

text: Vitis vinifera

text: cultivar

characteristic: organism common name

text: healthy

characteristic: plant developmental stage

characteristic: plant growth medium

characteristic: plant structure

text: plant axis

characteristic: propagation

text: 2 % MgO; 0.5 % Fe

characteristic: rooting medium macronutrients

text: 24 °C

characteristic: rooting medium pH

text: greenhouse

characteristic: sample disease status

text: Vitis vinifera

text: DOI: 10.5073/vitis.2016.55.121-128

characteristic: source material identifiers

text: soil

characteristic: subspecific genetic lineage name

text: pinot noir

characteristic: subspecific genetic lineage rank

text: Pinot noir sample not inoculated.


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: IFREMER

characteristic: collected by

characteristic: collection date

text: Salmonella enterica subsp. I

characteristic: common name

text: Fresh water

text: Yes

characteristic: environmental sample

text: France

characteristic: geographic location (country and/or sea)

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Salmonella enterica subsp. enterica

characteristic: organism

text: Salmonella enterica subsp. enterica

text: Salmonella Typhimurium

characteristic: serovar

text: Environment

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

text: public

text: IFREMER

text: Salmonella enterica subsp. I

text: Fresh water

characteristic: description

text: Yes

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

text: Salmonella enterica subsp. enterica

text: Salmonella enterica subsp. enterica

text: 4,5,12:i:- monophasic variant of Salmonella Typhimurium

text: Environment


text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: IFREMER

characteristic: collected by

text: Salmonella enterica subsp. I

text: Fresh water

text: Yes

text: France

text: No

text: Salmonella enterica subsp. enterica

text: Salmonella enterica subsp. enterica

text: 4,5,12:-:- nonmotile variant of Salmonella Typhimurium

text: Environment


text: SSI

text: public

text: IFREMER_UNIVERSITE DE CAEN

characteristic: collection date

text: Salmonella enterica subsp. I

characteristic: common name

text: Sand

text: Yes

characteristic: environmental sample

text: France

characteristic: geographic location (country and/or sea)

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Salmonella enterica subsp. enterica

characteristic: organism

text: Salmonella enterica subsp. enterica

text: Salmonella Typhimurium

text: Environment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

text: public

text: IFREMER_UNIVERSITE DE CAEN

text: Salmonella enterica subsp. I

text: Brackish water

characteristic: description

text: Yes

text: France

text: No

text: Salmonella enterica subsp. enterica

text: Salmonella enterica subsp. enterica

characteristic: serovar

text: Environment

characteristic: title


text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: IFREMER_UNIVERSITE DE CAEN

text: Salmonella enterica subsp. I

text: Brackish water

text: Yes

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

text: Salmonella enterica subsp. enterica

text: Salmonella enterica subsp. enterica

text: Salmonella Typhimurium

text: Environment


text: SSI

text: public

characteristic: Submitter Id

text: IFREMER

characteristic: collected by

characteristic: collection date

text: E. coli

characteristic: common name

text: Mussels

text: Yes

characteristic: environmental sample

text: France

characteristic: geographic location (country and/or sea)

text: No

characteristic: is the sequenced pathogen host associated?

text: Escherichia coli

text: Escherichia coli

text: Environment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

text: public

text: IFREMER_UNIVERSITE DE CAEN

text: E. coli

text: Brackish water

characteristic: description

text: Yes

text: France

text: No

characteristic: isolate

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: Environment


text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: IFREMER_UNIVERSITE DE CAEN

text: E. coli

text: Cockles

text: Yes

text: France

text: No

text: Escherichia coli

text: Escherichia coli

characteristic: serovar

text: Environment

characteristic: title


text: SSI

text: public

characteristic: Submitter Id

text: IFREMER

characteristic: collected by

characteristic: collection date

text: E. coli

characteristic: common name

text: Fresh water

text: Yes

characteristic: environmental sample

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

text: Escherichia coli

text: Escherichia coli

text: Environment


Sphingorhabdus sp. EL138

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Instituto Superior Tecnico

text: public

text: Sphingorhabdus sp. EL138

tag: Namespace:Instituto Superior Tecnico

text: Draft genome sequence of Sphingorhabdus sp. strain EL138, a metabolically-versatile alphaproteobacterium isolated from the gorgonian coral Eunicella labiata

characteristic: description

text: Portugal

characteristic: geographic location (country and/or sea)

text: Faro

characteristic: geographic location (region and locality)

text: Eunicella labiata

characteristic: host scientific name

text: gorgonian coral

characteristic: isolation source

text: 36.979778 N 7.989111 W

characteristic: lat lon

text: Sphingorhabdus sp. EL138

text: Sphingorhabdus sp. EL138

text: Genome sequence of Sphingorhabdus sp. strain EL138


text: IBERS

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: polar domain

characteristic: environment (biome)

text: glacial feature

characteristic: environment (feature)

text: granular sediment

characteristic: environment (material)

text: Svalbard

text: metagenome

characteristic: investigation type

text: miscellaneous natural or artificial environment

characteristic: miscellaneous environmental package

text: biofilm metagenome

characteristic: organism

text: In-field Nanopore benchmarking

characteristic: project name

text: biofilm metagenome

text: Nanopore

characteristic: sequencing method

text: SV-Foxf-Mix

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IBERS

text: public

characteristic: collection date

text: polar domain

text: glacial feature

text: granular sediment

text: Greenland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: biofilm metagenome

text: In-field Nanopore benchmarking

text: biofilm metagenome

text: Nanopore

text: GL-Rusl-Mix


text: IBERS

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: polar domain

characteristic: environment (biome)

text: glacial feature

text: granular sediment

text: Austria

text: metagenome

text: biofilm metagenome

text: In-field Nanopore benchmarking

text: biofilm metagenome

text: Nanopore

text: AU-Rmfn-Mix


text: IBERS

text: public

text: polar domain

text: glacial feature

characteristic: environment (feature)

text: granular sediment

characteristic: environment (material)

text: Svalbard

text: metagenome

characteristic: investigation type

characteristic: miscellaneous environmental package

text: biofilm metagenome

characteristic: organism

text: In-field Nanopore benchmarking

characteristic: project name

text: biofilm metagenome

text: Nanopore

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IBERS

text: public

characteristic: collection date

text: polar domain

text: glacial feature

text: granular sediment

text: Austria

characteristic: geographic location (country and/or sea)

text: metagenome

text: biofilm metagenome

text: In-field Nanopore benchmarking

text: biofilm metagenome

text: Nanopore

characteristic: title


text: CRI-FEM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 24 celsius degrees

characteristic: air temperature regimen

text: wine grape

characteristic: common name

text: sand-peat mixture (7:3 v/v)

characteristic: culture rooting medium

characteristic: description

text: Italy

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: glasshouse

characteristic: growth facility

text: DOI: 10.5073/vitis.2016.55.121-128

characteristic: isolation and growth condition

characteristic: light regimen

text: Vitis vinifera

text: wine grape

characteristic: organism common name

characteristic: plant developmental stage

text: soil

characteristic: plant growth medium

text: plant axis

characteristic: plant structure

text: asexual

characteristic: propagation

text: 5-L pots, 1 plants/pot

characteristic: rooting conditions

text: 19%N; 6 % P2O5; 11 % K2O

characteristic: rooting medium macronutrients

text: 2 % MgO; 0.5 % Fe

characteristic: rooting medium micronutrients

text: asexual spores of the pathogen penetrated through the stomata and differentiated the substomatal vesicle.

characteristic: sample disease status

text: diseased

characteristic: sample health state

text: Vitis vinifera

text: pinot noir

characteristic: subspecific genetic lineage name

text: cultivar

characteristic: subspecific genetic lineage rank

text: Pinot noir sample inoculated, 1 day after infection


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CRI-FEM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 24 celsius degrees

characteristic: air temperature regimen

characteristic: collection date

text: wine grape

characteristic: common name

text: sand-peat mixture (7:3 v/v)

characteristic: culture rooting medium

characteristic: description

text: Italy

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: glasshouse

text: DOI: 10.5073/vitis.2016.55.121-128

text: Vitis vinifera

characteristic: organism

text: wine grape

text: soil

text: plant axis

text: asexual

text: 5-L pots, 1 plants/pot

text: 19%N; 6 % P2O5; 11 % K2O

text: 2 % MgO; 0.5 % Fe

text: primary hypha with haustorium originated

text: diseased

text: Vitis vinifera

text: DOI: 10.5073/vitis.2016.55.121-128

characteristic: source material identifiers

text: pinot noir

text: cultivar

text: Pinot noir sample inoculated, 2 days after infection

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CRI-FEM

text: public

text: 24 celsius degrees

text: wine grape

text: sand-peat mixture (7:3 v/v)

text: Italy

characteristic: geographic location (longitude)

text: glasshouse

characteristic: growth facility

text: DOI: 10.5073/vitis.2016.55.121-128

characteristic: isolation and growth condition

characteristic: light regimen

text: Vitis vinifera

text: wine grape

characteristic: organism common name

characteristic: plant developmental stage

text: soil

characteristic: plant growth medium

text: plant axis

characteristic: plant structure

text: asexual

characteristic: propagation

text: 5-L pots, 1 plants/pot

characteristic: rooting conditions

text: 19%N; 6 % P2O5; 11 % K2O

characteristic: rooting medium macronutrients

text: 2 % MgO; 0.5 % Fe

characteristic: rooting medium micronutrients

text: hyphae branched inside the lacunose spaces of the infected areas forming haustoria for nutrient uptake at regular intervals

characteristic: sample disease status

text: diseased

characteristic: sample health state

text: Vitis vinifera

text: DOI: 10.5073/vitis.2016.55.121-128

text: pinot noir

characteristic: subspecific genetic lineage name

text: cultivar

characteristic: subspecific genetic lineage rank

text: Pinot noir sample inoculated, 3 dats after infection


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MMRI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: Whole genome sequencing applied to bulk undifferentiated H1 human embyronic stem cells

characteristic: description

text: Homo sapiens

characteristic: organism

text: Homo sapiens

characteristic: title


text: MMRI

text: public

text: human

text: Whole genome sequencing applied to bulk neurons differentiated from H1 human embyronic stem cells

text: Homo sapiens

text: Homo sapiens


text: MMRI

text: public

text: human

text: Whole genome sequencing applied to bulk neuronal precursor cells differentiated from H1 human embyronic stem cells

text: Homo sapiens

text: Homo sapiens


text: MMRI

text: public

text: human

text: Whole genome sequencing applied to bulk liver tissue from individidual CTRL-28

text: Homo sapiens

text: Homo sapiens


text: MMRI

text: public

text: human

text: Whole genome sequencing applied to bulk liver tissue from individidual CTRL-30

text: Homo sapiens

text: Homo sapiens


text: MMRI

text: public

text: human

text: Whole genome sequencing applied to bulk liver tissue from individidual CTRL-3

text: Homo sapiens

text: Homo sapiens


text: MMRI

text: public

text: human

text: Whole genome sequencing applied to bulk liver tissue from individidual CTRL-6

text: Homo sapiens

text: Homo sapiens


text: MMRI

text: public

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#25

text: human

text: Whole genome sequencing applied to single hippocampal neuron #1 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#1


text: MMRI

text: public

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#26

text: human

text: Whole genome sequencing applied to single hippocampal neuron #2 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens


text: MMRI

text: public

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#27

text: human

text: Whole genome sequencing applied to single hippocampal neuron #3 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#3


text: MMRI

text: public

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#28

text: human

text: Whole genome sequencing applied to single hippocampal neuron #4 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#4


text: MMRI

text: public

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#29

text: human

text: Whole genome sequencing applied to single hippocampal neuron #5 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#5


text: MMRI

text: public

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#30

text: human

text: Whole genome sequencing applied to single hippocampal neuron #6 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#6


text: MMRI

text: public

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#31

text: human

text: Whole genome sequencing applied to single hippocampal neuron #7 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#7


text: MMRI

text: public

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#32

text: human

text: Whole genome sequencing applied to single hippocampal neuron #8 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#8


text: MMRI

text: public

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#33

text: human

text: Whole genome sequencing applied to single hippocampal neuron #9 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#9


text: MMRI

text: public

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#34

text: human

text: Whole genome sequencing applied to single hippocampal neuron #10 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#10


text: MMRI

text: public

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#35

text: human

text: Whole genome sequencing applied to single hippocampal neuron #11 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#11


text: MMRI

text: public

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#36

text: human

text: Whole genome sequencing applied to single hippocampal neuron #12 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#12


text: MMRI

text: public

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#37

text: human

text: Whole genome sequencing applied to single hippocampal neuron #13 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#13


text: MMRI

text: public

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#38

text: human

text: Whole genome sequencing applied to single hippocampal neuron #14 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#14


text: MMRI

text: public

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#39

text: human

text: Whole genome sequencing applied to single hippocampal neuron #15 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#15


text: MMRI

text: public

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#40

text: human

text: Whole genome sequencing applied to single hippocampal neuron #16 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#16


text: MMRI

text: public

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#41

text: human

text: Whole genome sequencing applied to single hippocampal neuron #17 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#17


text: MMRI

text: public

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#42

text: human

text: Whole genome sequencing applied to single hippocampal neuron #18 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#18


text: MMRI

text: public

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#43

text: human

text: Whole genome sequencing applied to single hippocampal neuron #19 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#19


text: MMRI

text: public

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#44

text: human

text: Whole genome sequencing applied to single hippocampal neuron #20 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#20


text: MMRI

text: public

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#45

text: human

text: Whole genome sequencing applied to single hippocampal neuron #21 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#21


text: MMRI

text: public

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#46

text: human

text: Whole genome sequencing applied to single hippocampal neuron #22 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#22


text: MMRI

text: public

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#47

text: human

text: Whole genome sequencing applied to single hippocampal neuron #23 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#23


text: MMRI

text: public

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#48

text: human

text: Whole genome sequencing applied to single hippocampal neuron #24 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.30xWGS.CTRL-36.Neuron-#24


text: MMRI

text: public

text: human

text: Whole genome sequencing applied to bulk liver tissue from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens


text: MMRI

text: public

text: human

text: Whole genome sequencing applied to bulk liver tissue from individidual CTRL-42

text: Homo sapiens

text: Homo sapiens


text: MMRI

text: public

text: human

text: Whole genome sequencing applied to bulk liver tissue from individidual CTRL-45

text: Homo sapiens

text: Homo sapiens


text: MMRI

text: public

text: human

text: Whole genome sequencing applied to bulk liver tissue from individidual CTRL-55

text: Homo sapiens

text: Homo sapiens


text: MMRI

text: public

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#25

text: human

text: Retrotransposon capture sequencing applied to single hippocampal neuron #1 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#1


text: MMRI

text: public

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#26

text: human

text: Retrotransposon capture sequencing applied to single hippocampal neuron #2 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens


text: MMRI

text: public

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#27

text: human

text: Retrotransposon capture sequencing applied to single hippocampal neuron #3 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#3


text: MMRI

text: public

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#28

text: human

text: Retrotransposon capture sequencing applied to single hippocampal neuron #4 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#4


text: MMRI

text: public

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#29

text: human

text: Retrotransposon capture sequencing applied to single hippocampal neuron #5 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#5


text: MMRI

text: public

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#30

text: human

text: Retrotransposon capture sequencing applied to single hippocampal neuron #6 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#6


text: MMRI

text: public

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#31

text: human

text: Retrotransposon capture sequencing applied to single hippocampal neuron #7 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#7


text: MMRI

text: public

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#32

text: human

text: Retrotransposon capture sequencing applied to single hippocampal neuron #8 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#8


text: MMRI

text: public

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#33

text: human

text: Retrotransposon capture sequencing applied to single hippocampal neuron #9 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#9


text: MMRI

text: public

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#34

text: human

text: Retrotransposon capture sequencing applied to single hippocampal neuron #10 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#10


text: MMRI

text: public

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#35

text: human

text: Retrotransposon capture sequencing applied to single hippocampal neuron #11 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#11


text: MMRI

text: public

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#36

text: human

text: Retrotransposon capture sequencing applied to single hippocampal neuron #12 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#12


text: MMRI

text: public

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#37

text: human

text: Retrotransposon capture sequencing applied to single hippocampal neuron #13 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#13


text: MMRI

text: public

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#38

text: human

text: Retrotransposon capture sequencing applied to single hippocampal neuron #14 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#14


text: MMRI

text: public

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#39

text: human

text: Retrotransposon capture sequencing applied to single hippocampal neuron #15 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#15


text: MMRI

text: public

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#40

text: human

text: Retrotransposon capture sequencing applied to single hippocampal neuron #16 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#16


text: MMRI

text: public

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#41

text: human

text: Retrotransposon capture sequencing applied to single hippocampal neuron #17 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#17


text: MMRI

text: public

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#42

text: human

text: Retrotransposon capture sequencing applied to single hippocampal neuron #18 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#18


text: MMRI

text: public

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#43

text: human

text: Retrotransposon capture sequencing applied to single hippocampal neuron #19 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#19


text: MMRI

text: public

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#44

text: human

text: Retrotransposon capture sequencing applied to single hippocampal neuron #20 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#20


text: MMRI

text: public

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#45

text: human

text: Retrotransposon capture sequencing applied to single hippocampal neuron #21 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#21


text: MMRI

text: public

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#46

text: human

text: Retrotransposon capture sequencing applied to single hippocampal neuron #22 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#22


text: MMRI

text: public

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#47

text: human

text: Retrotransposon capture sequencing applied to single hippocampal neuron #23 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#23


text: MMRI

text: public

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#48

text: human

text: Retrotransposon capture sequencing applied to single hippocampal neuron #24 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.RC-seq.CTRL-36.Neuron-#24


text: MMRI

text: public

text: human

text: Deep whole genome sequencing applied to bulk hippocampal tissue from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens


text: MMRI

text: public

text: human

text: Retrotransposon capture sequencing applied to bulk hippocampal tissue from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens


text: MMRI

text: public

text: human

text: Retrotransposon capture sequencing applied to bulk liver tissue from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens


text: MMRI

text: public

text: human

text: L1Hs insertion profiling applied to bulk hippocampal tissue from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens


text: MMRI

text: public

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#25

text: human

text: L1Hs insertion profiling applied to single hippocampal neuron #1 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#1


text: MMRI

text: public

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#26

text: human

text: L1Hs insertion profiling applied to single hippocampal neuron #2 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens


text: MMRI

text: public

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#27

text: human

text: L1Hs insertion profiling applied to single hippocampal neuron #3 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#3


text: MMRI

text: public

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#28

text: human

text: L1Hs insertion profiling applied to single hippocampal neuron #4 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#4


text: MMRI

text: public

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#29

text: human

text: L1Hs insertion profiling applied to single hippocampal neuron #5 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#5


text: MMRI

text: public

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#30

text: human

text: L1Hs insertion profiling applied to single hippocampal neuron #6 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#6


text: MMRI

text: public

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#31

text: human

text: L1Hs insertion profiling applied to single hippocampal neuron #7 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#7


text: MMRI

text: public

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#32

text: human

text: L1Hs insertion profiling applied to single hippocampal neuron #8 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#8


text: MMRI

text: public

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#33

text: human

text: L1Hs insertion profiling applied to single hippocampal neuron #9 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#9


text: MMRI

text: public

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#34

text: human

text: L1Hs insertion profiling applied to single hippocampal neuron #10 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#10


text: MMRI

text: public

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#35

text: human

text: L1Hs insertion profiling applied to single hippocampal neuron #11 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#11


text: MMRI

text: public

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#36

text: human

text: L1Hs insertion profiling applied to single hippocampal neuron #12 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#12


text: MMRI

text: public

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#37

text: human

text: L1Hs insertion profiling applied to single hippocampal neuron #13 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#13


text: MMRI

text: public

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#38

text: human

text: L1Hs insertion profiling applied to single hippocampal neuron #14 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#14


text: MMRI

text: public

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#39

text: human

text: L1Hs insertion profiling applied to single hippocampal neuron #15 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#15


text: MMRI

text: public

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#40

text: human

text: L1Hs insertion profiling applied to single hippocampal neuron #16 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#16


text: MMRI

text: public

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#41

text: human

text: L1Hs insertion profiling applied to single hippocampal neuron #17 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#17


text: MMRI

text: public

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#42

text: human

text: L1Hs insertion profiling applied to single hippocampal neuron #18 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#18


text: MMRI

text: public

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#43

text: human

text: L1Hs insertion profiling applied to single hippocampal neuron #19 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#19


text: MMRI

text: public

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#44

text: human

text: L1Hs insertion profiling applied to single hippocampal neuron #20 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#20


text: MMRI

text: public

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#45

text: human

text: L1Hs insertion profiling applied to single hippocampal neuron #21 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#21


text: MMRI

text: public

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#46

text: human

text: L1Hs insertion profiling applied to single hippocampal neuron #22 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#22


text: MMRI

text: public

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#47

text: human

text: L1Hs insertion profiling applied to single hippocampal neuron #23 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#23


text: MMRI

text: public

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#48

text: human

text: L1Hs insertion profiling applied to single hippocampal neuron #24 from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens

text: Hippocampus.Single.L1-IP.CTRL-36.Neuron-#24


text: MMRI

text: public

text: human

text: L1Hs insertion profiling applied to bulk liver tissue from individidual CTRL-36

text: Homo sapiens

text: Homo sapiens


text: Institute of Food Safety, Animal Health and Environment BIOR

text: public

tag: Namespace:Institute of Food Safety, Animal Health and Environment "BIOR"

characteristic: collection date

text: uncultured eukaryote

text: biofilm from a hot drinking water distribution network

text: anthropogenic environment

characteristic: environment (biome)

text: drinking water

characteristic: environment (feature)

text: biofilm

characteristic: environment (material)

text: Yes

characteristic: environmental sample

characteristic: further details

text: Latvia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Riga

characteristic: geographic location (region and locality)

text: uncultured eukaryote

text: F-CGGTAAYTCCAGCTCYV R-CCGTCAATTHCTTYAART

characteristic: pcr primers

text: uncultured eukaryote

characteristic: target gene

characteristic: target subfragment

text: biofilm 18S


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: uncultured eukaryote

characteristic: common name

text: biofilm from a cold drinking water distribution network

text: anthropogenic environment

text: drinking water

text: biofilm

text: Yes

text: Latvia

text: Riga

text: uncultured eukaryote

text: uncultured eukaryote

text: biofilm 18S


multiplexed data

text: KYUNG HEE UNIVERSITY

text: public

text: multiplexed data

tag: Namespace:KYUNG HEE UNIVERSITY

text: house mouse

text: Mus musculus

characteristic: organism

text: Mus musculus

text: 8-mo 16S amplicon pyrodata

characteristic: title


E-MTAB-6403:Sample 1

text: Shanghai Jiao Tong University

text: public

text: E-MTAB-6403:Sample 1

tag: Namespace:Shanghai Jiao Tong University

characteristic: age

text: neoplasm

characteristic: biopsy site

text: ArrayExpress

characteristic: broker name

text: human

text: Protocols: Fresh tissues from 3 colorectal cancer patients were collected at the Anhui medical university first affiliated hospital, Anhui, China. All samples were examined by one experienced pathologist. After collected, samples were put in liquid nitrogen quickly, and preserved in a low temperature environment. Liquid nitrogen quick-frozen tissues were used to extract total RNA. Total RNA was extracted using TRIzol reagent (Invitrogen) and resuspend in RNase free water. Total RNA was extract with TRIzol Reagent . And about 50 μg total RNA was incubated with streptavidin dynabeads coated with biotinylated GsuI-oligo (dT) primer. The first strand cDNA was synthesized with SuperScript III (Invitrogen) and dNTP mix containing 5-methylated-dCTP instead of dCTP. Then the resulting DNA/RNA hybrids were treated with RNase H and DNA polymerase I before dsDNA was generated and dNTP mix containing dUTP instead of dTTP was used in this step. Next, the resulting dsDNA was fragmentated to ~200-500 bp with fragmentase (NEB). 3' terminal fragments were released from beads through Gsu I digestion, which were subjected to deep sequencing by Illumina HiSeq X Ten.

characteristic: description

text: colorectal cancer

characteristic: disease

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: colon

characteristic: organism part

text: Homo sapiens

text: female

characteristic: sex

text: Sample 1


E-MTAB-6403:Sample 3

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Shanghai Jiao Tong University

characteristic: INSDC center name

text: public

text: E-MTAB-6403:Sample 3

text: neoplasm

text: ArrayExpress

text: human

text: colorectal cancer

text: Homo sapiens

text: Homo sapiens

text: colon

text: Homo sapiens

text: female

text: Sample 3


E-MTAB-6403:Sample 5

text: Shanghai Jiao Tong University

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6403:Sample 5

characteristic: Submitter Id

text: neoplasm

text: ArrayExpress

text: human

text: colorectal cancer

text: Homo sapiens

text: Homo sapiens

text: colon

text: Homo sapiens

text: female

text: Sample 5


E-MTAB-6403:Sample 2

text: Shanghai Jiao Tong University

text: public

text: E-MTAB-6403:Sample 2

characteristic: age

text: normal tissue adjacent to tumour

characteristic: biopsy site

text: ArrayExpress

text: human

characteristic: common name

text: colorectal cancer

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: colon

text: Homo sapiens

text: female

text: Sample 2

characteristic: title


E-MTAB-6403:Sample 4

text: Shanghai Jiao Tong University

text: public

text: E-MTAB-6403:Sample 4

text: normal tissue adjacent to tumour

text: ArrayExpress

characteristic: broker name

text: human

characteristic: description

text: colorectal cancer

characteristic: disease

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: colon

characteristic: organism part

text: Homo sapiens

text: female

text: Sample 4


E-MTAB-6403:Sample 6

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Shanghai Jiao Tong University

text: public

text: E-MTAB-6403:Sample 6

text: normal tissue adjacent to tumour

text: ArrayExpress

text: human

text: colorectal cancer

text: Homo sapiens

text: Homo sapiens

text: colon

text: Homo sapiens

text: female

characteristic: sex

text: Sample 6


text: UNIBE-IG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: dog

text: Newfoundland - male

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Newfoundland


text: UNIBE-IG

text: public

characteristic: Submitter Id

text: dog

characteristic: common name

text: Standard Schnauzer - female

text: Canis lupus familiaris

characteristic: organism

text: Canis lupus familiaris

text: Standard Schnauzer


text: UNIBE-IG

text: public

text: dog

text: Australian Cattle Dog - male

characteristic: description

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Australian Cattle Dog

characteristic: title


text: public

tag: Namespace:State Key Laboratory of Crop Biology, College of Life Sciences.Shandong Agricultural University, China.

unit: day

characteristic: age

text: ArrayExpress

characteristic: broker name

text: bread wheat

text: Luozhen No.1

characteristic: cultivar

text: Protocols: Having cut both side of embryo and another, the pericarp of the seed were carefully stripped and frozen in liquid nitrogen and stored at −80˚C until RNA extraction. Plants of purple-grain wheat line Luozhen No.1 were grown under natural field conditions at Shandong Agricultural University Experimental Station (36°169 N, 117°169 E), Tai’an, China during October, 2010 to June, 2011. The spikes of purple-grain wheat Luozhen No.1 were bagged with four-layer Kraft paper bags after pollination. Raw reads produced from sequencing machines contain dirty reads which contain adapters, unknown or low quality bases. Dirty raw reads are discarded and generated clean reads. Transcriptome de novo assembly is carried out with short reads assembling program - Trinity. Trinity firstly combines reads with certain length of overlap to form longer fragments, which are called contigs. Then the reads are mapped back to contigs; with paired-end reads it is able to detect contigs from the same transcript as well as the distances between these contigs. Finally, Trinity connects the contigs, and get sequences that cannot be extended on either end. Such sequences are defined as Unigenes. When multiple samples from a same species are sequenced, Unigenes from each sample's assembly can be taken into further process of sequence splicing and redundancy removing with sequence clustering software to acquire non-redundant Unigenes as long as possible. Total RNAs were extracted from pericarp of purple-grain wheat using an RNeasy Plant Mini Kit according to the standard protocol (Cat. No. 74904, Qiagen, Valencia, CA, USA). At least 500 ng total RNA was extracted from each material used for library construction. After the total RNA extraction and DNase I treatment, magnetic beads with Oligo (dT) are used to isolate mRNA. Mixed with the fragmentation buffer, the mRNA is fragmented into short fragments. Then cDNA is synthesized using the mRNA fragments as templates. Short fragments are purified and resolved with EB buffer for end reparation and single nucleotide A (adenine) addition. After that, the short fragments are connected with adapters. After agarose gel electrophoresis, the suitable fragments are selected for the PCR amplification as templates. At last, the library could be sequenced using Illumina HiSeqTM 2000.

text: fruit ripening stage

characteristic: developmental stage

text: continuous dark (no light) regimen

characteristic: environmental stress

text: wild type genotype

characteristic: genotype

text: Triticum aestivum

text: Triticum aestivum

text: pericarp

text: Triticum aestivum


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: State Key Laboratory of Crop Biology, College of Life Sciences.Shandong Agricultural University, China.

text: public

text: ArrayExpress

text: bread wheat

text: Luozhen No.1

text: fruit ripening stage

text: wild type genotype

text: Triticum aestivum

text: Triticum aestivum

text: pericarp

characteristic: organism part

text: Triticum aestivum


2-mo WT1

text: KYUNG HEE UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 2-mo WT1

text: house mouse

text: fecal 16S amplicon

text: Mus musculus

text: Mus musculus

text: 2-mo WT1


2-mo WT3

text: KYUNG HEE UNIVERSITY

text: public

text: 2-mo WT3

characteristic: Submitter Id

text: house mouse

characteristic: common name

text: fecal 16S amplicon

characteristic: description

text: Mus musculus

characteristic: organism

text: Mus musculus

text: 2-mo WT3

characteristic: title


2-mo WT4

text: KYUNG HEE UNIVERSITY

text: public

text: 2-mo WT4

text: house mouse

text: fecal 16S amplicon

text: Mus musculus

text: Mus musculus

text: 2-mo WT4


2-mo WT5

text: KYUNG HEE UNIVERSITY

text: public

text: 2-mo WT5

text: house mouse

text: fecal 16S amplicon

text: Mus musculus

text: Mus musculus

text: 2-mo WT5


2-mo WT6

text: KYUNG HEE UNIVERSITY

text: public

text: 2-mo WT6

text: house mouse

text: fecal 16S amplicon

text: Mus musculus

text: Mus musculus

text: 2-mo WT6


2-mo ADLP2

text: KYUNG HEE UNIVERSITY

text: public

text: 2-mo ADLP2

text: house mouse

text: fecal 16S amplicon

text: Mus musculus

text: Mus musculus

text: 2-mo ADLP2


2-mo ADLP3

text: KYUNG HEE UNIVERSITY

text: public

text: 2-mo ADLP3

text: house mouse

text: fecal 16S amplicon

text: Mus musculus

text: Mus musculus

text: 2-mo ADLP3


2-mo ADLP4

text: KYUNG HEE UNIVERSITY

text: public

text: 2-mo ADLP4

text: house mouse

text: fecal 16S amplicon

text: Mus musculus

text: Mus musculus

text: 2-mo ADLP4


2-mo ADLP5

text: KYUNG HEE UNIVERSITY

text: public

text: 2-mo ADLP5

text: house mouse

text: fecal 16S amplicon

text: Mus musculus

text: Mus musculus

text: 2-mo ADLP5


2-mo ADLP6

text: KYUNG HEE UNIVERSITY

text: public

text: 2-mo ADLP6

text: house mouse

text: fecal 16S amplicon

text: Mus musculus

text: Mus musculus

text: 2-mo ADLP6


4-mo WT1

text: KYUNG HEE UNIVERSITY

text: public

text: 4-mo WT1

text: house mouse

text: fecal 16S amplicon

text: Mus musculus

text: Mus musculus

text: 4-mo WT1


4-mo WT2

text: KYUNG HEE UNIVERSITY

text: public

text: 4-mo WT2

text: house mouse

text: fecal 16S amplicon

text: Mus musculus

text: Mus musculus

text: 4-mo WT2


4-mo WT3

text: KYUNG HEE UNIVERSITY

text: public

text: 4-mo WT3

text: house mouse

text: fecal 16S amplicon

text: Mus musculus

text: Mus musculus

text: 4-mo WT3


4-mo WT4

text: KYUNG HEE UNIVERSITY

text: public

text: 4-mo WT4

text: house mouse

text: fecal 16S amplicon

text: Mus musculus

text: Mus musculus

text: 4-mo WT4


4-mo WT5

text: KYUNG HEE UNIVERSITY

text: public

text: 4-mo WT5

text: house mouse

text: fecal 16S amplicon

text: Mus musculus

text: Mus musculus

text: 4-mo WT5


4-mo WT6

text: KYUNG HEE UNIVERSITY

text: public

text: 4-mo WT6

text: house mouse

text: fecal 16S amplicon

text: Mus musculus

text: Mus musculus

text: 4-mo WT6


4-mo ADLP2

text: KYUNG HEE UNIVERSITY

text: public

text: 4-mo ADLP2

text: house mouse

text: fecal 16S amplicon

text: Mus musculus

text: Mus musculus

text: 4-mo ADLP2


4-mo ADLP3

text: KYUNG HEE UNIVERSITY

text: public

text: 4-mo ADLP3

text: house mouse

text: fecal 16S amplicon

text: Mus musculus

text: Mus musculus

text: 4-mo ADLP3


4-mo ADLP4

text: KYUNG HEE UNIVERSITY

text: public

text: 4-mo ADLP4

text: house mouse

text: fecal 16S amplicon

text: Mus musculus

text: Mus musculus

text: 4-mo ADLP4


4-mo ADLP5

text: KYUNG HEE UNIVERSITY

text: public

text: 4-mo ADLP5

text: house mouse

text: fecal 16S amplicon

text: Mus musculus

text: Mus musculus

text: 4-mo ADLP5


4-mo ADLP6

text: KYUNG HEE UNIVERSITY

text: public

text: 4-mo ADLP6

text: house mouse

text: fecal 16S amplicon

text: Mus musculus

text: Mus musculus

text: 4-mo ADLP6


6-mo WT1

text: KYUNG HEE UNIVERSITY

text: public

text: 6-mo WT1

text: house mouse

text: fecal 16S amplicon

text: Mus musculus

text: Mus musculus

text: 6-mo WT1


6-mo WT2

text: KYUNG HEE UNIVERSITY

text: public

text: 6-mo WT2

text: house mouse

text: fecal 16S amplicon

text: Mus musculus

text: Mus musculus

text: 6-mo WT2


6-mo WT3

text: KYUNG HEE UNIVERSITY

text: public

text: 6-mo WT3

text: house mouse

text: fecal 16S amplicon

text: Mus musculus

text: Mus musculus

text: 6-mo WT3


6-mo WT4

text: KYUNG HEE UNIVERSITY

text: public

text: 6-mo WT4

text: house mouse

text: fecal 16S amplicon

text: Mus musculus

text: Mus musculus

text: 6-mo WT4


6-mo WT5

text: KYUNG HEE UNIVERSITY

text: public

text: 6-mo WT5

text: house mouse

text: fecal 16S amplicon

text: Mus musculus

text: Mus musculus

text: 6-mo WT5


6-mo WT6

text: KYUNG HEE UNIVERSITY

text: public

text: 6-mo WT6

text: house mouse

text: fecal 16S amplicon

text: Mus musculus

text: Mus musculus

text: 6-mo WT6


6-mo ADLP2

text: KYUNG HEE UNIVERSITY

text: public

text: 6-mo ADLP2

text: house mouse

text: fecal 16S amplicon

text: Mus musculus

text: Mus musculus

text: 6-mo ADLP2


6-mo ADLP3

text: KYUNG HEE UNIVERSITY

text: public

text: 6-mo ADLP3

text: house mouse

text: fecal 16S amplicon

text: Mus musculus

text: Mus musculus

text: 6-mo ADLP3


6-mo ADLP4

text: KYUNG HEE UNIVERSITY

text: public

text: 6-mo ADLP4

text: house mouse

text: fecal 16S amplicon

text: Mus musculus

text: Mus musculus

text: 6-mo ADLP4


6-mo ADLP5

text: KYUNG HEE UNIVERSITY

text: public

text: 6-mo ADLP5

text: house mouse

text: fecal 16S amplicon

text: Mus musculus

text: Mus musculus

text: 6-mo ADLP5


6-mo ADLP6

text: KYUNG HEE UNIVERSITY

text: public

text: 6-mo ADLP6

text: house mouse

text: fecal 16S amplicon

text: Mus musculus

text: Mus musculus

text: 6-mo ADLP6


text: KYUNG HEE UNIVERSITY

text: public

text: house mouse

text: colonic transcriptome of 6-mo WT1 mice

text: Mus musculus

text: Mus musculus

text: WT1 colonic transcriptome


text: KYUNG HEE UNIVERSITY

text: public

text: house mouse

text: colonic transcriptome of 6-mo WT2 mice

text: Mus musculus

text: Mus musculus

text: WT2 colonic transcriptome


text: KYUNG HEE UNIVERSITY

text: public

text: house mouse

text: colonic transcriptome of 6-mo WT3 mice

text: Mus musculus

text: Mus musculus

text: WT3 colonic transcriptome


text: KYUNG HEE UNIVERSITY

text: public

text: house mouse

text: colonic transcriptome of 6-mo WT4 mice

text: Mus musculus

text: Mus musculus

text: WT4 colonic transcriptome


text: KYUNG HEE UNIVERSITY

text: public

text: house mouse

text: colonic transcriptome of 6-mo WT5 mice

text: Mus musculus

text: Mus musculus

text: WT5 colonic transcriptome


text: KYUNG HEE UNIVERSITY

text: public

text: house mouse

text: colonic transcriptome of 6-mo WT6 mice

text: Mus musculus

text: Mus musculus

text: WT6 colonic transcriptome


text: KYUNG HEE UNIVERSITY

text: public

text: house mouse

text: colonic transcriptome of 6-mo ADLP2 mice

text: Mus musculus

text: Mus musculus

text: ADLP2 colonic transcriptome


text: KYUNG HEE UNIVERSITY

text: public

text: house mouse

text: colonic transcriptome of 6-mo ADLP3 mice

text: Mus musculus

text: Mus musculus

text: ADLP3 colonic transcriptome


text: KYUNG HEE UNIVERSITY

text: public

text: house mouse

text: colonic transcriptome of 6-mo ADLP4 mice

text: Mus musculus

text: Mus musculus

text: ADLP4 colonic transcriptome


text: KYUNG HEE UNIVERSITY

text: public

text: house mouse

text: colonic transcriptome of 6-mo ADLP5 mice

text: Mus musculus

text: Mus musculus

text: ADLP5 colonic transcriptome


text: KYUNG HEE UNIVERSITY

text: public

text: house mouse

text: colonic transcriptome of 6-mo ADLP6 mice

text: Mus musculus

text: Mus musculus

text: ADLP6 colonic transcriptome


text: KYUNG HEE UNIVERSITY

text: public

text: house mouse

text: colonic transcriptome of 6-mo FMT1 mice

text: Mus musculus

text: Mus musculus

text: FMT1 colonic transcriptome


text: KYUNG HEE UNIVERSITY

text: public

text: house mouse

text: colonic transcriptome of 6-mo FMT2 mice

text: Mus musculus

text: Mus musculus

text: FMT2 colonic transcriptome


text: KYUNG HEE UNIVERSITY

text: public

text: house mouse

text: colonic transcriptome of 6-mo FMT3 mice

text: Mus musculus

text: Mus musculus

text: FMT3 colonic transcriptome


text: KYUNG HEE UNIVERSITY

text: public

text: house mouse

text: colonic transcriptome of 6-mo FMT4 mice

text: Mus musculus

text: Mus musculus

text: FMT4 colonic transcriptome


text: KYUNG HEE UNIVERSITY

text: public

text: house mouse

text: colonic transcriptome of 6-mo FMT5 mice

text: Mus musculus

text: Mus musculus

text: FMT5 colonic transcriptome


text: KYUNG HEE UNIVERSITY

text: public

text: house mouse

text: colonic transcriptome of 6-mo FMT6 mice

text: Mus musculus

text: Mus musculus

text: FMT6 colonic transcriptome


text: APHA

text: public

text: Engage project

text: UK

characteristic: isolation site

text: Salmonella enterica subsp. enterica serovar Derby

characteristic: year isolated


RNA-seq, rep1

characteristic: ENA-CHECKLIST

text: public

text: RNA-seq, rep1

tag: Namespace:MAX PLANCK INSTITUTE FOR DEVELOPMENTAL BIOLOGY

text: Adult

characteristic: dev stage

text: Hermaphrodite

characteristic: mating type

text: Pristionchus pacificus

text: Pristionchus pacificus

characteristic: strain

text: RNA-seq, rep1


RNA-seq, rep2

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MAX PLANCK INSTITUTE FOR DEVELOPMENTAL BIOLOGY

text: public

text: RNA-seq, rep2

text: Adult

text: Hermaphrodite

text: Pristionchus pacificus

text: Pristionchus pacificus

text: RNA-seq, rep2


ATAC-seq, rep1

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ATAC-seq, rep1

text: Adult

text: Hermaphrodite

text: Pristionchus pacificus

text: Pristionchus pacificus

text: ATAC-seq, rep1


ATAC-seq, rep2

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ATAC-seq, rep2

characteristic: Submitter Id

text: Adult

text: Hermaphrodite

text: Pristionchus pacificus

text: Pristionchus pacificus

text: ATAC-seq, rep2


H3K27ac, rep1

text: public

text: H3K27ac, rep1

text: Adult

text: Hermaphrodite

text: Pristionchus pacificus

characteristic: organism

text: Pristionchus pacificus

text: H3K27ac, rep1


H3K27ac, rep2

text: public

text: H3K27ac, rep2

text: Adult

text: Hermaphrodite

text: Pristionchus pacificus

text: Pristionchus pacificus

text: H3K27ac, rep2

characteristic: title


H3K27me3, rep1

text: public

text: H3K27me3, rep1

text: Adult

text: Hermaphrodite

text: Pristionchus pacificus

text: Pristionchus pacificus

text: H3K27me3, rep1


H3K27me3, rep2

text: public

text: H3K27me3, rep2

text: Adult

text: Hermaphrodite

text: Pristionchus pacificus

text: Pristionchus pacificus

text: H3K27me3, rep2


H3K36me3, rep1

text: public

text: H3K36me3, rep1

text: Adult

text: Hermaphrodite

text: Pristionchus pacificus

text: Pristionchus pacificus

text: H3K36me3, rep1


H3K36me3, rep2

text: public

text: H3K36me3, rep2

text: Adult

text: Hermaphrodite

text: Pristionchus pacificus

text: Pristionchus pacificus

text: H3K36me3, rep2


H3K4me1, rep1

text: public

text: H3K4me1, rep1

text: Adult

text: Hermaphrodite

text: Pristionchus pacificus

text: Pristionchus pacificus

text: H3K4me1, rep1


H3K4me1, rep2

text: public

text: H3K4me1, rep2

text: Adult

text: Hermaphrodite

text: Pristionchus pacificus

text: Pristionchus pacificus

text: H3K4me1, rep2


H3K4me3, rep1

text: public

text: H3K4me3, rep1

text: Adult

text: Hermaphrodite

text: Pristionchus pacificus

text: Pristionchus pacificus

text: H3K4me3, rep1


H3K4me3, rep2

text: public

text: H3K4me3, rep2

text: Adult

text: Hermaphrodite

text: Pristionchus pacificus

text: Pristionchus pacificus

text: H3K4me3, rep2


H3K79me2, rep1

text: public

text: H3K79me2, rep1

text: Adult

text: Hermaphrodite

text: Pristionchus pacificus

text: Pristionchus pacificus

text: H3K79me2, rep1


H3K79me2, rep2

text: public

text: H3K79me2, rep2

text: Adult

text: Hermaphrodite

text: Pristionchus pacificus

text: Pristionchus pacificus

text: H3K79me2, rep2


H3K9me3, rep1

text: public

text: H3K9me3, rep1

text: Adult

text: Hermaphrodite

text: Pristionchus pacificus

text: Pristionchus pacificus

text: H3K9me3, rep1


H3K9me3, rep2

text: public

text: H3K9me3, rep2

text: Adult

text: Hermaphrodite

text: Pristionchus pacificus

text: Pristionchus pacificus

text: H3K9me3, rep2


Input, rep1

text: public

text: Input, rep1

text: Adult

text: Hermaphrodite

text: Pristionchus pacificus

text: Pristionchus pacificus

text: Input, rep1


Input, rep2

text: public

text: Input, rep2

text: Adult

text: Hermaphrodite

text: Pristionchus pacificus

text: Pristionchus pacificus

text: Input, rep2


Iso-seq, direct

text: public

text: Iso-seq, direct

text: Mixed stage

text: Hermaphrodite

text: Pristionchus pacificus

text: Pristionchus pacificus

text: Iso-seq, direct


Iso-seq, total RNA

text: public

text: Iso-seq, total RNA

text: Mixed stage

text: Hermaphrodite

text: Pristionchus pacificus

text: Pristionchus pacificus

text: Iso-seq, total RNA


text: feces metagenome

characteristic: ArrayExpress-SPECIES

text: SC

text: public

text: feces metagenome

characteristic: common name

text: feces metagenome

text: feces metagenome

characteristic: subject id


characteristic: ENA-CHECKLIST

text: YALE

text: public

text: house mouse

text: Germ free mouse ileum gavaged with 1 x 10^6 CFU of Vehicle

characteristic: description

text: Mus musculus

text: Mus musculus

text: Germ free mouse ileum gavaged with 1 x 10^6 CFU of agent.


text: YALE

text: public

text: house mouse

text: Germ free mouse ileum gavaged with 1 x 10^6 CFU of Enterococcus gallinarum.

text: Mus musculus

text: Mus musculus


text: YALE

text: public

text: house mouse

text: Germ free mouse ileum gavaged with 1 x 10^6 CFU of Enterococcus faecalis.

text: Mus musculus

text: Mus musculus


text: YALE

text: public

text: house mouse

text: Germ free mouse ileum gavaged with 1 x 10^6 CFU of Bacteroides thetaiotamicron.

text: Mus musculus

text: Mus musculus


text: SAARLAND UNIVERSITY

text: public

tag: Namespace:SAARLAND UNIVERSITY

text: Paramecium tetraurelia

text: Paramecium tetraurelia

text: transcriptome replicate


text: SAARLAND UNIVERSITY

text: public

text: Paramecium tetraurelia

text: Paramecium tetraurelia

text: transcriptome


text: SAARLAND UNIVERSITY

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: transcript replicate


text: Rhinovirus A81

text: SC

text: public

text: Rhinovirus A81

text: Rhinovirus A81

text: Rhinovirus A81


text: Coxsackievirus A9

text: SC

text: public

text: Coxsackievirus A9

text: Coxsackievirus A9

text: Coxsackievirus A9


text: Bebaru virus

text: SC

text: public

text: Bebaru virus

text: Bebaru virus

text: Bebaru virus


text: Respiratory syncytial virus type A

text: SC

text: public

text: Respiratory syncytial virus type A

text: Respiratory syncytial virus type A

text: Respiratory syncytial virus type A


text: Echovirus E4

text: SC

text: public

text: Echovirus E4

text: Echovirus E4

text: Echovirus E4


text: Echovirus E6

text: SC

text: public

text: Echovirus E6

text: Echovirus E6

text: Echovirus E6


text: Echovirus E9

text: SC

text: public

text: Echovirus E9

text: Echovirus E9

text: Echovirus E9


text: Echovirus E11

text: SC

text: public

text: Echovirus E11

text: Echovirus E11

text: Echovirus E11


text: Echovirus E16

text: SC

text: public

text: Echovirus E16

text: Echovirus E16

text: Echovirus E16


text: Echovirus E18

text: SC

text: public

text: Echovirus E18

text: Echovirus E18

text: Echovirus E18


text: Measles morbillivirus

text: SC

text: public

text: Measles morbillivirus

text: Measles morbillivirus

text: Measles morbillivirus


text: Mumps rubulavirus

text: SC

text: public

text: Mumps rubulavirus

text: Mumps rubulavirus

text: Mumps rubulavirus


text: Coxsackievirus A16

text: SC

text: public

text: Coxsackievirus A16

text: Coxsackievirus A16

text: Coxsackievirus A16


text: Enterovirus A

text: SC

text: public

text: Enterovirus A

text: Enterovirus A

text: Enterovirus A


text: Coxsackievirus A4

text: SC

text: public

text: Coxsackievirus A4

text: Coxsackievirus A4

text: Coxsackievirus A4


text: Coxsackievirus B1

text: SC

text: public

text: Coxsackievirus B1

text: Coxsackievirus B1

text: Coxsackievirus B1


text: Coxsackievirus B2

text: SC

text: public

text: Coxsackievirus B2

text: Coxsackievirus B2

text: Coxsackievirus B2


text: Coxsackievirus B3

text: SC

text: public

text: Coxsackievirus B3

text: Coxsackievirus B3

text: Coxsackievirus B3


text: Coxsackievirus B4

text: SC

text: public

text: Coxsackievirus B4

text: Coxsackievirus B4

text: Coxsackievirus B4


text: Coxsackievirus B5

text: SC

text: public

text: Coxsackievirus B5

text: Coxsackievirus B5

text: Coxsackievirus B5


text: Enterovirus Type 71

text: SC

text: public

text: Enterovirus Type 71

text: Enterovirus A71

text: Enterovirus A71


text: Echovirus E13

text: SC

text: public

text: Echovirus E13

text: Echovirus E13

text: Echovirus E13


text: Echovirus E14

text: SC

text: public

text: Echovirus E14

text: Echovirus E14

text: Echovirus E14


text: Echovirus E25

text: SC

text: public

text: Echovirus E25

text: Echovirus E25

text: Echovirus E25


text: Echovirus E3

text: SC

text: public

text: Echovirus E3

text: Echovirus E3

text: Echovirus E3


text: Echovirus E30

text: SC

text: public

text: Echovirus E30

text: Echovirus E30

text: Echovirus E30


text: Echovirus E6

text: SC

text: public

text: Echovirus E6

text: Echovirus E6

text: Echovirus E6


text: Echovirus E7

text: SC

text: public

text: Echovirus E7

text: Echovirus E7

text: Echovirus E7


text: Toscana virus

text: SC

text: public

text: Toscana virus

text: Toscana virus

text: Toscana virus


text: Bunyamwera virus

text: SC

text: public

text: Bunyamwera virus

text: Bunyamwera virus

text: Bunyamwera virus


text: Tahyna virus

text: SC

text: public

text: Tahyna virus

text: Tahyna virus

text: Tahyna virus


text: Semliki Forest Virus

text: SC

text: public

text: Semliki Forest Virus

text: Semliki Forest virus

text: Semliki Forest virus


text: Zika virus

text: SC

text: public

text: Zika virus

text: Zika virus

text: Zika virus


text: Mumps rubulavirus

text: SC

text: public

text: Mumps rubulavirus

text: Mumps rubulavirus

text: Mumps rubulavirus


text: Human respiratory syncytial virus B

text: SC

text: public

text: Human respiratory syncytial virus B

text: Human respiratory syncytial virus B

text: Human respiratory syncytial virus B


text: Sandfly fever Naples virus

text: SC

text: public

text: Sandfly fever Naples virus

text: Sandfly fever Naples virus

text: Sandfly fever Naples virus


text: Sandfly fever Sicilian virus

text: SC

text: public

text: Sandfly fever Sicilian virus

text: Sandfly fever Sicilian virus

text: Sandfly fever Sicilian virus


text: Ross River virus

text: SC

text: public

text: Ross River virus

text: Ross River virus

text: Ross River virus


text: Sindbis virus

text: SC

text: public

text: Sindbis virus

text: Sindbis virus

text: Sindbis virus


text: Measles morbillivirus

text: SC

text: public

text: Measles morbillivirus

text: Measles morbillivirus

text: Measles morbillivirus


text: Measles virus strain Edmonston-Zagreb

text: SC

text: public

text: Measles virus strain Edmonston-Zagreb

text: Measles virus strain Edmonston-Zagreb

text: Measles virus strain Edmonston-Zagreb


text: Mopeia mammarenavirus

text: SC

text: public

text: Mopeia mammarenavirus

text: Mopeia mammarenavirus

text: Mopeia mammarenavirus


text: Respiratory syncytial virus type A

text: SC

text: public

text: Respiratory syncytial virus type A

text: Respiratory syncytial virus type A

text: Respiratory syncytial virus type A


text: Echovirus Type 3

text: SC

text: public

text: Echovirus Type 3

text: Echovirus E3

text: Echovirus E3


text: Echovirus Type 7

text: SC

text: public

text: Echovirus Type 7

text: Echovirus E7

text: Echovirus E7


text: Echovirus E13

text: SC

text: public

text: Echovirus E13

text: Echovirus E13

text: Echovirus E13


text: Coxsackievirus B2

text: SC

text: public

text: Coxsackievirus B2

text: Coxsackievirus B2

text: Coxsackievirus B2


text: Coxsackievirus B5

text: SC

text: public

text: Coxsackievirus B5

text: Coxsackievirus B5

text: Coxsackievirus B5


text: Coxsackievirus B1

text: SC

text: public

text: Coxsackievirus B1

text: Coxsackievirus B1

text: Coxsackievirus B1


text: Coxsackievirus B3

text: SC

text: public

text: Coxsackievirus B3

text: Coxsackievirus B3

text: Coxsackievirus B3


text: Coxsackievirus B4

text: SC

text: public

text: Coxsackievirus B4

text: Coxsackievirus B4

text: Coxsackievirus B4


text: Human Rhinovirus 9

text: SC

text: public

text: Human Rhinovirus 9

text: Human rhinovirus A9

text: Human rhinovirus A9


text: Human Rhinovirus 46

text: SC

text: public

text: Human Rhinovirus 46

text: Human rhinovirus A46

text: Human rhinovirus A46


text: Human Rhinovirus 73

text: SC

text: public

text: Human Rhinovirus 73

text: Human rhinovirus A73

text: Human rhinovirus A73


text: Human Rhinovirus 81

text: SC

text: public

text: Human Rhinovirus 81

text: Rhinovirus A81

text: Rhinovirus A81


text: Yeast

characteristic: ArrayExpress-PHENOTYPE

text: Saccharomyces cerevisiae

text: SC

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Yeast

characteristic: phenotype

text: Saccharomyces cerevisiae


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CENTRE FOR GENOMIC REGULATION (CRG)

text: public

tag: Namespace:CENTRE FOR GENOMIC REGULATION (CRG)

text: human

text: Homo sapiens

text: Homo sapiens

text: Combinatorially Complete Library of 12 FAS exon 6 mutations


characteristic: External Id

text: SAARLAND UNIVERSITY

characteristic: INSDC center name

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: transcriptome


text: lymphocytes

text: gut

text: cells from gut

text: mixed

characteristic: ArrayExpress-SEX

text: Danio rerio

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: zebrafish

text: Mixed

characteristic: gender

text: Danio rerio

text: cells from gut

text: Danio rerio


text: lymphocytes

text: gut

text: cells from gut

text: female

text: Danio rerio

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: zebrafish

text: Female

text: Danio rerio

characteristic: organism

text: cells from gut

text: Danio rerio


text: Beijing Chaoyang Hospita

text: public

tag: Namespace:Beijing Chaoyang Hospita

characteristic: collection date

text: blood plasma

characteristic: environment (biome)

text: blood plasma

characteristic: environment (feature)

text: blood plasma

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

text: 39.9 N

characteristic: geographic location (latitude)

text: 116. 3 E

characteristic: geographic location (longitude)

text: human-associated

characteristic: human associated environmental package

text: metagenome

characteristic: investigation type

text: metagenome

text: systemic bacteria in ST-elevation myocardial infarction

characteristic: project name

text: metagenome

text: pyrosequencing

characteristic: sequencing method

text: blood plasma

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CIC BIOGUNE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:CIC BIOGUNE

text: zebrafish

characteristic: common name

text: zebrafish gut

text: faeces

text: gut content

text: Spain

unit: m

characteristic: geographic location (depth)

text: metagenome

text: Danio rerio

text: Zebrafish fed on high fat diet

text: Danio rerio

text: pyrosequencing

text: larvae gut metagenome

text: water

characteristic: water environmental package


text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:FEDERAL INSTITUTE FOR RISK ASSESSMENT (BFR)

characteristic: Submitter Id

characteristic: collection date

text: Salmonella enterica subsp. enterica serovar Infantis

text: Germany

characteristic: geographic location (country and/or sea)

text: Salmonella enterica

characteristic: isolate

text: environment

characteristic: isolation source

characteristic: organism

text: Infantis

characteristic: serovar

text: enterica

characteristic: sub species

text: FU-Berlin BfR VIM poultry


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Stazione Zoologica Anton Dorhn

text: public

tag: Namespace:Stazione Zoologica Anton Dorhn

text: uncultured eukaryote

text: Mediterranean surface marine water, part of study of protist temporal diversity

characteristic: description

text: marine

characteristic: environment (biome)

text: sea water surface

characteristic: environment (feature)

text: sea water

characteristic: environment (material)

text: Yes

characteristic: environmental sample

characteristic: further details

text: Italy

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: uncultured eukaryote

text: CCAGCASCYGCGGTAATTCC ACTTTCGTTCTTGATYRATGA

characteristic: pcr primers

text: uncultured eukaryote

characteristic: target gene

characteristic: target subfragment

text: Mediterranean surface marine water, sample V2

characteristic: title


text: Stazione Zoologica Anton Dorhn

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: uncultured eukaryote

characteristic: common name

text: marine

text: sea water surface

text: sea water

text: Yes

text: Italy

characteristic: geographic location (country and/or sea)

text: uncultured eukaryote

characteristic: organism

text: uncultured eukaryote

text: Mediterranean surface marine water, sample V4


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Stazione Zoologica Anton Dorhn

text: public

text: uncultured eukaryote

characteristic: description

text: marine

characteristic: environment (biome)

text: sea water surface

characteristic: environment (feature)

text: sea water

characteristic: environment (material)

text: Yes

characteristic: environmental sample

characteristic: further details

text: Italy

text: uncultured eukaryote

text: uncultured eukaryote

text: Mediterranean surface marine water, sample V6


text: Stazione Zoologica Anton Dorhn

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: uncultured eukaryote

text: marine

text: sea water surface

text: sea water

text: Yes

text: Italy

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: uncultured eukaryote

characteristic: pcr primers

text: uncultured eukaryote

characteristic: target gene

characteristic: target subfragment

text: Mediterranean surface marine water, sample V8

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Stazione Zoologica Anton Dorhn

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: uncultured eukaryote

characteristic: common name

text: marine

text: sea water surface

text: sea water

text: Yes

text: Italy

characteristic: geographic location (country and/or sea)

text: uncultured eukaryote

characteristic: organism

text: uncultured eukaryote

text: Mediterranean surface marine water, sample V9


text: Stazione Zoologica Anton Dorhn

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: uncultured eukaryote

characteristic: description

text: marine

characteristic: environment (biome)

text: sea water surface

characteristic: environment (feature)

text: sea water

characteristic: environment (material)

text: Yes

characteristic: environmental sample

characteristic: further details

text: Italy

text: uncultured eukaryote

text: uncultured eukaryote

text: Mediterranean surface marine water, sample V10


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Stazione Zoologica Anton Dorhn

text: public

text: uncultured eukaryote

text: marine

text: sea water surface

text: sea water

text: Yes

text: Italy

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: uncultured eukaryote

characteristic: pcr primers

text: uncultured eukaryote

characteristic: target gene

characteristic: target subfragment

text: Mediterranean surface marine water, sample V11

characteristic: title


text: Stazione Zoologica Anton Dorhn

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: uncultured eukaryote

characteristic: common name

text: marine

text: sea water surface

text: sea water

text: Yes

text: Italy

characteristic: geographic location (country and/or sea)

text: uncultured eukaryote

characteristic: organism

text: uncultured eukaryote

text: Mediterranean surface marine water, sample V13