characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UCSDMI

text: public

characteristic: Submitter Id

characteristic: age

text: weeks

characteristic: age units

text: UBERON:lumen of gut

characteristic: body habitat

text: UBERON:stomach

characteristic: body product

text: UBERON:stomach

characteristic: body site

characteristic: cage number

characteristic: days post infection

text: day 91 stomach tissue and contents from mouse 47

characteristic: description

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: organic material

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

text: mouse 47

characteristic: host taxid

text: adult

characteristic: life stage

text: Total Counts

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: post

text: stomach tissue and contents

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: title

text: Chagas disease microbiome

text: Missing: Not collected


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: weeks

characteristic: anonymized name

text: UBERON:lumen of gut

text: UBERON:small intestine

text: UBERON:small intestine

text: day 91 small intestine tissue and contents from mouse 47

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: organic material

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

text: mouse 47

characteristic: host subject id

characteristic: latitude

text: adult

characteristic: longitude

text: Total Counts

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: post

text: small intestine tissue and contents

characteristic: sample type

text: mouse gut metagenome

text: male

text: Chagas disease microbiome

text: Missing: Not collected


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UCSDMI

text: public

characteristic: Submitter Id

characteristic: age

text: weeks

characteristic: age units

text: UBERON:lumen of gut

characteristic: body habitat

text: UBERON:large intestine

characteristic: body product

text: UBERON:large intestine

characteristic: body site

characteristic: cage number

characteristic: days post infection

text: day 91 large intestine tissue and contents from mouse 49

characteristic: description

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: organic material

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

text: mouse 49

characteristic: host taxid

text: adult

characteristic: life stage

text: Total Counts

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: post

text: large intestine tissue and contents

text: mouse gut metagenome

text: male

characteristic: sex

text: Chagas disease microbiome

characteristic: title

text: Missing: Not collected


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: weeks

characteristic: anonymized name

text: UBERON:lumen of gut

text: UBERON:stomach

text: UBERON:stomach

text: day 91 stomach tissue and contents from mouse 49

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: organic material

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

text: mouse 49

characteristic: host subject id

characteristic: latitude

text: adult

characteristic: longitude

text: Total Counts

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: post

text: stomach tissue and contents

characteristic: sample type

text: mouse gut metagenome

text: male

text: Chagas disease microbiome

text: Missing: Not collected


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UCSDMI

text: public

characteristic: Submitter Id

characteristic: age

text: weeks

characteristic: age units

text: UBERON:lumen of gut

characteristic: body habitat

text: UBERON:small intestine

characteristic: body product

text: UBERON:small intestine

characteristic: body site

characteristic: cage number

characteristic: days post infection

text: day 91 small intestine tissue and contents from mouse 49

characteristic: description

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: organic material

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

text: mouse 49

characteristic: host taxid

text: adult

characteristic: life stage

text: Total Counts

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: post

text: small intestine tissue and contents

text: mouse gut metagenome

text: male

characteristic: sex

text: Chagas disease microbiome

characteristic: title

text: Missing: Not collected


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: weeks

characteristic: anonymized name

text: UBERON:lumen of gut

text: UBERON:large intestine

text: UBERON:large intestine

text: day 91 large intestine tissue and contents from mouse 5

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: organic material

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

text: mouse 5

characteristic: host subject id

characteristic: latitude

text: adult

characteristic: longitude

text: Total Counts

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: post

text: large intestine tissue and contents

characteristic: sample type

text: mouse gut metagenome

text: male

text: Chagas disease microbiome

text: Missing: Not collected


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UCSDMI

text: public

characteristic: Submitter Id

characteristic: age

text: weeks

characteristic: age units

text: UBERON:lumen of gut

characteristic: body habitat

text: UBERON:esophagus

characteristic: body product

text: UBERON:esophagus

characteristic: body site

characteristic: cage number

characteristic: days post infection

text: day 91 oesophagus tissue and contents from mouse 5

characteristic: description

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: organic material

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

text: mouse 5

characteristic: host taxid

text: adult

characteristic: life stage

text: Total Counts

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: post

text: oesophagus tissue and contents

text: mouse gut metagenome

text: male

characteristic: sex

text: Chagas disease microbiome

characteristic: title

text: Missing: Not collected


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: weeks

characteristic: anonymized name

text: UBERON:lumen of gut

text: UBERON:stomach

text: UBERON:stomach

text: day 91 stomach tissue and contents from mouse 5

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: organic material

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

text: mouse 5

characteristic: host subject id

characteristic: latitude

text: adult

characteristic: longitude

text: Total Counts

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: post

text: stomach tissue and contents

characteristic: sample type

text: mouse gut metagenome

text: male

text: Chagas disease microbiome

text: Missing: Not collected


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UCSDMI

text: public

characteristic: Submitter Id

characteristic: age

text: weeks

characteristic: age units

text: UBERON:lumen of gut

characteristic: body habitat

text: UBERON:small intestine

characteristic: body product

text: UBERON:small intestine

characteristic: body site

characteristic: cage number

characteristic: days post infection

text: day 91 small intestine tissue and contents from mouse 5

characteristic: description

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: organic material

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

text: mouse 5

characteristic: host taxid

text: adult

characteristic: life stage

text: Total Counts

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: post

text: small intestine tissue and contents

text: mouse gut metagenome

text: male

characteristic: sex

text: Chagas disease microbiome

characteristic: title

text: Missing: Not collected


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: weeks

characteristic: anonymized name

text: UBERON:lumen of gut

text: UBERON:large intestine

text: UBERON:large intestine

text: day 91 large intestine tissue and contents from mouse 50

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: organic material

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

text: mouse 50

characteristic: host subject id

characteristic: latitude

text: adult

characteristic: longitude

text: Total Counts

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: post

text: large intestine tissue and contents

characteristic: sample type

text: mouse gut metagenome

text: male

text: Chagas disease microbiome

text: Missing: Not collected


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UCSDMI

text: public

characteristic: Submitter Id

characteristic: age

text: weeks

characteristic: age units

text: UBERON:lumen of gut

characteristic: body habitat

text: UBERON:esophagus

characteristic: body product

text: UBERON:esophagus

characteristic: body site

characteristic: cage number

characteristic: days post infection

text: day 91 oesophagus tissue and contents from mouse 50

characteristic: description

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: organic material

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

text: mouse 50

characteristic: host taxid

text: adult

characteristic: life stage

text: Total Counts

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: post

text: oesophagus tissue and contents

text: mouse gut metagenome

text: male

characteristic: sex

text: Chagas disease microbiome

characteristic: title

text: Missing: Not collected


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: weeks

characteristic: anonymized name

text: UBERON:lumen of gut

text: UBERON:stomach

text: UBERON:stomach

text: day 91 stomach tissue and contents from mouse 50

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: organic material

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

text: mouse 50

characteristic: host subject id

characteristic: latitude

text: adult

characteristic: longitude

text: Total Counts

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: post

text: stomach tissue and contents

characteristic: sample type

text: mouse gut metagenome

text: male

text: Chagas disease microbiome

text: Missing: Not collected


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UCSDMI

text: public

characteristic: Submitter Id

characteristic: age

text: weeks

characteristic: age units

text: UBERON:lumen of gut

characteristic: body habitat

text: UBERON:small intestine

characteristic: body product

text: UBERON:small intestine

characteristic: body site

characteristic: cage number

characteristic: days post infection

text: day 91 small intestine tissue and contents from mouse 50

characteristic: description

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: organic material

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

text: mouse 50

characteristic: host taxid

text: adult

characteristic: life stage

text: Total Counts

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: post

text: small intestine tissue and contents

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: title

text: Chagas disease microbiome

text: Missing: Not collected


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: weeks

characteristic: anonymized name

text: UBERON:lumen of gut

text: UBERON:large intestine

text: UBERON:large intestine

text: day 91 large intestine tissue and contents from mouse 7

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: organic material

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

text: mouse 7

characteristic: host subject id

characteristic: latitude

text: adult

characteristic: longitude

text: Total Counts

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: post

text: large intestine tissue and contents

characteristic: sample type

text: mouse gut metagenome

text: male

text: Chagas disease microbiome

text: Missing: Not collected


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UCSDMI

text: public

characteristic: Submitter Id

characteristic: age

text: weeks

characteristic: age units

text: UBERON:lumen of gut

characteristic: body habitat

text: UBERON:esophagus

characteristic: body product

text: UBERON:esophagus

characteristic: body site

characteristic: cage number

characteristic: days post infection

text: day 91 oesophagus tissue and contents from mouse 7

characteristic: description

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: organic material

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

text: mouse 7

characteristic: host taxid

text: adult

characteristic: life stage

text: Total Counts

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: post

text: oesophagus tissue and contents

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: title

text: Chagas disease microbiome

text: Missing: Not collected


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: weeks

characteristic: anonymized name

text: UBERON:lumen of gut

text: UBERON:stomach

text: UBERON:stomach

text: day 91 stomach tissue and contents from mouse 7

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: organic material

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

text: mouse 7

characteristic: host subject id

characteristic: latitude

text: adult

characteristic: longitude

text: Total Counts

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: post

text: stomach tissue and contents

characteristic: sample type

text: mouse gut metagenome

text: male

text: Chagas disease microbiome

text: Missing: Not collected


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UCSDMI

text: public

characteristic: Submitter Id

characteristic: age

text: weeks

characteristic: age units

text: UBERON:lumen of gut

characteristic: body habitat

text: UBERON:small intestine

characteristic: body product

text: UBERON:small intestine

characteristic: body site

characteristic: cage number

characteristic: days post infection

text: day 91 small intestine tissue and contents from mouse 7

characteristic: description

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: organic material

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

text: mouse 7

characteristic: host taxid

text: adult

characteristic: life stage

text: Total Counts

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: post

text: small intestine tissue and contents

text: mouse gut metagenome

text: male

characteristic: sex

text: Chagas disease microbiome

characteristic: title

text: Missing: Not collected


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: weeks

characteristic: anonymized name

text: UBERON:lumen of gut

text: UBERON:large intestine

text: UBERON:large intestine

text: day 91 large intestine tissue and contents from mouse 8

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: organic material

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

text: mouse 8

characteristic: host subject id

characteristic: latitude

text: adult

characteristic: longitude

text: Total Counts

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: post

text: large intestine tissue and contents

characteristic: sample type

text: mouse gut metagenome

text: male

text: Chagas disease microbiome

text: Missing: Not collected


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UCSDMI

text: public

characteristic: Submitter Id

characteristic: age

text: weeks

characteristic: age units

text: UBERON:lumen of gut

characteristic: body habitat

text: UBERON:esophagus

characteristic: body product

text: UBERON:esophagus

characteristic: body site

characteristic: cage number

characteristic: days post infection

text: day 91 oesophagus tissue and contents from mouse 8

characteristic: description

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: organic material

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

text: mouse 8

characteristic: host taxid

text: adult

characteristic: life stage

text: Total Counts

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: post

text: oesophagus tissue and contents

text: mouse gut metagenome

text: male

characteristic: sex

text: Chagas disease microbiome

characteristic: title

text: Missing: Not collected


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: weeks

characteristic: anonymized name

text: UBERON:lumen of gut

text: UBERON:stomach

text: UBERON:stomach

text: day 91 stomach tissue and contents from mouse 8

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: organic material

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

text: mouse 8

characteristic: host subject id

characteristic: latitude

text: adult

characteristic: longitude

text: Total Counts

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: post

text: stomach tissue and contents

characteristic: sample type

text: mouse gut metagenome

text: male

text: Chagas disease microbiome

text: Missing: Not collected


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UCSDMI

text: public

characteristic: Submitter Id

characteristic: age

text: weeks

characteristic: age units

text: UBERON:lumen of gut

characteristic: body habitat

text: UBERON:small intestine

characteristic: body product

text: UBERON:small intestine

characteristic: body site

characteristic: cage number

characteristic: days post infection

text: day 91 small intestine tissue and contents from mouse 8

characteristic: description

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: organic material

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

text: mouse 8

characteristic: host taxid

text: adult

characteristic: life stage

text: Total Counts

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: post

text: small intestine tissue and contents

text: mouse gut metagenome

text: male

characteristic: sex

text: Chagas disease microbiome

characteristic: title

text: Missing: Not collected


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: weeks

characteristic: anonymized name

text: UBERON:lumen of gut

text: UBERON:large intestine

text: UBERON:large intestine

text: day 91 large intestine tissue and contents from mouse 9

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: organic material

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

text: mouse 9

characteristic: host subject id

characteristic: latitude

text: adult

characteristic: longitude

text: Total Counts

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: post

text: large intestine tissue and contents

characteristic: sample type

text: mouse gut metagenome

text: male

text: Chagas disease microbiome

text: Missing: Not collected


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UCSDMI

text: public

characteristic: Submitter Id

characteristic: age

text: weeks

characteristic: age units

text: UBERON:lumen of gut

characteristic: body habitat

text: UBERON:esophagus

characteristic: body product

text: UBERON:esophagus

characteristic: body site

characteristic: cage number

characteristic: days post infection

text: day 91 oesophagus tissue and contents from mouse 9

characteristic: description

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: organic material

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

text: mouse 9

characteristic: host taxid

text: adult

characteristic: life stage

text: Total Counts

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: post

text: oesophagus tissue and contents

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: title

text: Chagas disease microbiome

text: Missing: Not collected


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: weeks

characteristic: anonymized name

text: UBERON:lumen of gut

text: UBERON:stomach

text: UBERON:stomach

text: day 91 stomach tissue and contents from mouse 9

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: organic material

text: USA:CA:San Diego

characteristic: geo loc name

text: Mus musculus

text: mouse 9

characteristic: host subject id

characteristic: latitude

text: adult

characteristic: longitude

text: Total Counts

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: post

text: stomach tissue and contents

characteristic: sample type

text: mouse gut metagenome

text: male

text: Chagas disease microbiome

text: Missing: Not collected


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UCSDMI

text: public

characteristic: Submitter Id

characteristic: age

text: weeks

characteristic: age units

text: UBERON:lumen of gut

characteristic: body habitat

text: UBERON:small intestine

characteristic: body product

text: UBERON:small intestine

characteristic: body site

characteristic: cage number

characteristic: days post infection

text: day 91 small intestine tissue and contents from mouse 9

characteristic: description

text: TRUE

text: urban biome

text: animal-associated habitat

text: host-associated

text: organic material

text: USA:CA:San Diego

text: Mus musculus

characteristic: host scientific name

text: mouse 9

characteristic: host taxid

text: adult

characteristic: life stage

text: Total Counts

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: post

text: small intestine tissue and contents

text: mouse gut metagenome

text: male

characteristic: sex

text: Chagas disease microbiome

characteristic: title

text: Missing: Not collected


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: AALBORG UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:AALBORG UNIVERSITY

text: metagenome

text: metagenome

text: anaerobic digestion


characteristic: External Id

text: AALBORG UNIVERSITY

text: public

characteristic: Submitter Id

text: metagenome

text: metagenome

text: activated sludge


text: AALBORG UNIVERSITY

text: public

text: metagenome

text: metagenome

text: fresh water


text: AALBORG UNIVERSITY

text: public

text: metagenome

text: metagenome

text: ground water


text: AALBORG UNIVERSITY

text: public

text: metagenome

text: metagenome

text: human gut


text: AALBORG UNIVERSITY

text: public

text: metagenome

text: metagenome

text: mock


text: AALBORG UNIVERSITY

text: public

text: metagenome

text: metagenome

text: sediment


text: AALBORG UNIVERSITY

text: public

text: metagenome

text: metagenome

text: soil


text: NIOO-KNAW

text: public

characteristic: collection date

text: Soil from the root zone of Avicennia germinans mangroves from Florida

characteristic: description

text: Mangrove biome

characteristic: environment (biome)

text: Black mangrove (Avicennia germinans)

characteristic: environment (feature)

text: Soil

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

text: 0 - 0,05

unit: m

characteristic: geographic location (depth)

text: 1.0 m MLLW

characteristic: geographic location (elevation)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: metagenomes

text: Microbial communities from A. germinans and R. mangle soils

characteristic: project name

text: metagenomes

text: Illumina MiSeq

characteristic: sequencing method

text: soil

characteristic: soil environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: NIOO-KNAW

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Soil from the root zone of Rhizophora mangle mangroves from Florida

text: Mangrove biome

text: Red mangrove (Rhizophora mangle)

text: Soil

text: USA

text: 0 - 0,05

text: -0.2 m MLLW

text: metagenome

text: metagenomes

characteristic: organism

text: metagenomes

text: Illumina MiSeq

text: soil

characteristic: title


characteristic: External Id

text: NIOO-KNAW

text: public

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: Mangrove biome

characteristic: environment (biome)

text: Black mangrove (Avicennia germinans)

characteristic: environment (feature)

text: Soil

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

text: 0 - 0,05

characteristic: geographic location (depth)

text: 0.4 m MLLW

characteristic: geographic location (elevation)

text: metagenome

text: metagenomes

text: metagenomes

text: Illumina MiSeq

text: soil


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: NIOO-KNAW

characteristic: INSDC center name

text: public

text: Mangrove biome

text: Black mangrove (Avicennia germinans)

text: Soil

text: USA

text: 0 - 0,05

text: 0.7 m MLLW

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: metagenomes

characteristic: project name

text: metagenomes

text: Illumina MiSeq

characteristic: sequencing method

text: soil

characteristic: soil environmental package


characteristic: External Id

text: NIOO-KNAW

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: Mangrove biome

text: Red mangrove (Rhizophora mangle)

text: Soil

text: USA

text: 0 - 0,05

text: -0.3 m MLLW

text: metagenome

text: metagenomes

characteristic: organism

text: metagenomes

text: Illumina MiSeq

text: soil

characteristic: title


E-MTAB-6032:Sample 1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC center name

text: public

text: E-MTAB-6032:Sample 1

tag: Namespace:Laboratory of Growth and Development, St-Patrick Research Group in Basic Oncology, Cancer Division of the Quebec University Hospital Research Centre, and Department of Molecular Biology, Medical Biochemistry and Pathology, Faculty of Medicine, Laval University

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: lymphoblast

characteristic: cell type

text: human

characteristic: common name

text: Protocols: Cells were fixed in 1% formaldehyde for 8 min at room temperature. Nuclei were isolated using Lysis Buffer (10 mM Tris pH 7.5, 10 mM NaCl, 3 mM MgCl2, 0.5% NP-40), transferred to Sonication Buffer (50 mM Tris-HCl pH 7.5, 150 mM NaCl, 2 mM EGTA, 4 mM EDTA, 0.1% SDS, 1% Triton X-100, 1% NP-40) and sonicated (Bioruptor, Diagenode) for 30 cycles of 30 sec on / 30 sec off at high intensity. Each immunoprecipitation (IP) was carried out on the equivalent of 50 x 106 cells in IP Buffer (150 mM NaCl, 50 mM Tris-HCl pH 7.5, 5 mM EDTA, 0.5% NP-40, 1% Triton X-100) overnight at 4°C. The antibody slurry was prepared with 50 µl A-, 50 µl G-Dynabeads and 60 µg.ml-1 antibody per IP. See; Herdman et al. (2017). PLoS Genetics 13, e1006899. Rabbit polyclonal antibodies against mouse UBF, RPI large subunit (RPA194/Polr1A)were generated in the laboratory. Anti-RPA194 (#5) and anti-UBF (#8) antisera were raised against mouse RPA194 (aa 231-429) and mouse UBF (aa 2-404) ref: https://doi.org/10.1016/j.molcel.2010.03.015. K562 cells were grown to subconfluence in Iscove's Modified Dulbecco's Medium, 10% fetal bovine serum. Immunoprecipitated chromatin was treated with RNaseA and the DNA isolated using 2% Na SDS and 2mg.ml-1 Proteinase-K. ChIP DNA samples were quality controlled by qPCR before being sent for library preparation and 50 base single-end sequencing on an Illumina HiSeq 2000 (McGill University and Genome Qubec Innovation Centre).

text: chronic myelogenous leukemia

characteristic: disease

text: Homo sapiens

text: Homo sapiens

text: bone marrow

characteristic: organism part

text: Homo sapiens

text: Sample 1

type: has member


E-MTAB-6032:Sample 2

characteristic: External Id

text: Laboratory of Growth and Development, St-Patrick Research Group in Basic Oncology, Cancer Division of the Quebec University Hospital Research Centre, and Department of Molecular Biology, Medical Biochemistry and Pathology, Faculty of Medicine, Laval University

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-6032:Sample 2

text: ArrayExpress

text: lymphoblast

text: human

text: chronic myelogenous leukemia

text: Homo sapiens

text: Homo sapiens

text: bone marrow

text: Homo sapiens

text: Sample 2


E-MTAB-6032:Sample 3

text: public

characteristic: SRA accession

text: E-MTAB-6032:Sample 3

characteristic: Submitter Id

text: ArrayExpress

text: lymphoblast

text: human

characteristic: description

text: chronic myelogenous leukemia

text: Homo sapiens

text: Homo sapiens

text: bone marrow

text: Homo sapiens

text: Sample 3


E-MTAB-6032:Sample 4

characteristic: ENA-CHECKLIST

text: public

text: E-MTAB-6032:Sample 4

text: ArrayExpress

text: lymphoblast

text: human

text: chronic myelogenous leukemia

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: bone marrow

text: Homo sapiens

text: Sample 4

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: FUNCTIONAL GENOMICS CENTER ZURICH

characteristic: INSDC center name

text: public

tag: Namespace:FUNCTIONAL GENOMICS CENTER ZURICH

text: human

text: Homo sapiens

text: Homo sapiens


text: public

tag: Namespace:Max Planck Institute for the Science of Human History

text: Yersinia pestis

text: Yersinia pestis


KunilaII

text: Max Planck Institute for the Science of Human History

text: public

text: KunilaII

text: Yersinia pestis

text: Yersinia pestis

text: KunilaII


text: public

text: Yersinia pestis

text: Yersinia pestis


text: Pseudomonas aeruginosa

characteristic: ArrayExpress-SPECIES

text: SC

text: public

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa

characteristic: subject id


text: Pseudomonas aeruginosa

text: SC

text: public

text: Pseudomonas aeruginosa

characteristic: common name

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa


text: male

characteristic: ArrayExpress-SEX

text: Homo sapiens

text: SC

text: public

text: human

text: Male

characteristic: gender

text: Homo sapiens

text: Homo sapiens


characteristic: External Id

text: CEBITEC

characteristic: INSDC first public

text: public

characteristic: collection date

text: Genome sequence of the bile salt-degrading bacterium Novosphingobium sp. strain Chol11, a model organism for bacterial steroid catabolism

text: freshwater

characteristic: environment (biome)

text: freshwater

characteristic: environment (feature)

text: freshwater

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: Novosphingobium sp. Chol11

characteristic: project name

text: Novosphingobium sp. Chol11

text: Illumina MiSeq

characteristic: sequencing method

text: water

characteristic: water environmental package


text: Skin

characteristic: ArrayExpress-PHENOTYPE

text: male

text: Mus musculus

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: house mouse

characteristic: common name

text: Male

text: Mus musculus

characteristic: organism

text: Skin

characteristic: phenotype

text: Mus musculus

characteristic: subject id

characteristic: title


text: Skin

text: female

characteristic: ArrayExpress-SEX

text: Mus musculus

characteristic: External Id

text: SC

characteristic: INSDC first public

text: public

text: house mouse

text: Female

characteristic: gender

text: Mus musculus

text: Skin

text: Mus musculus


characteristic: ENA-CHECKLIST

text: INRA

text: public

text: stephane CHAILLOU

characteristic: collected by

characteristic: collection date

characteristic: culture collection

text: Beef Carpaccio

characteristic: description

text: Beef Carpaccio

characteristic: isolation source

text: Lactococcus piscium

text: Lactococcus piscium

characteristic: strain

text: Food sample


Phyllospadix iwatensis

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Phyllospadix iwatensis

tag: Namespace:IASMA RESEARCH CENTRE - FONDAZIONE EDMUND MACH

characteristic: Submitter Id

text: Transcriptomics-assisted gene mining approaches have been widely used for understanding the physiological implications of how an organism respond to the surrounding environment. Next generation sequencing based transcriptomics has played a key role in the identification of new functional genes, allowing a understanding of species genomic adaptation to their surrounding environment. Apart from genomic understanding, large scale transcriptome profiling has played a major role in understanding evolutionary constraints and has been also used to estimate the convergence and divergence of traits between species. Aquatic plants represent an important clade of higher plants, which have been recently been examined to identify loss and gain of gene families through whole genome sequencing approaches. In the present research, we present a large scale transcriptomics repository of aquatic plants, which provides complete transcriptomes of 9 seagrass species spanning across 1052262 unigenes and allowing for rapid mining of functional genes across these transcriptomes. SeagrassDB not only allows for the comparative mining of genes using BLAST, but also allows the information to be downloaded with features such as relative rates of expression as FPKM values, gene ontologies, BLASTx based assignment and family level classification, interpro domains, KEGG orthology, transcriptions factors and prosite information for each classified unigenes for respective species.

text: Phyllospadix iwatensis

text: Phyllospadix iwatensis

text: SeagrassDB: An open-source transcriptomics portal for exploring the phylogenetically profiled transcriptomics landscape in aquatic plants


Lemna minor

characteristic: External Id

text: IASMA RESEARCH CENTRE - FONDAZIONE EDMUND MACH

text: public

text: Lemna minor

text: Lemna minor

characteristic: organism

text: Lemna minor

characteristic: title


Cymodocea serrulata

characteristic: ENA-CHECKLIST

characteristic: INSDC first public

text: public

text: Cymodocea serrulata

text: Cymodocea serrulata

text: Cymodocea serrulata


Halodule uninervis

text: public

text: Halodule uninervis

text: Halodule uninervis

text: Halodule uninervis


Syringodium isoetifolium

text: public

text: Syringodium isoetifolium

text: Syringodium isoetifolium

text: Syringodium isoetifolium


Halophila ovalis

text: public

text: Halophila ovalis

text: Halophila ovalis

text: Halophila ovalis


text: INRA

text: public

text: Stephane CHAILLOU

characteristic: collected by

characteristic: collection date

text: Vaccum-packed beef carpaccio

text: beef carpaccio

text: Lactobacillus fuchuensis

text: Lactobacillus fuchuensis

text: food sample


text: INRA

text: public

text: Stephane CHAILLOU

characteristic: culture collection

text: Beef carpaccio

characteristic: description

text: beef carpaccio

text: Pseudomonas lundensis

text: Pseudomonas lundensis

text: food sample


text: INRA

text: public

text: Stephane Chaillou

text: Beef carpaccio

text: beef carpaccio

characteristic: isolation source

text: Lactobacillus algidus

text: Lactobacillus algidus

characteristic: strain

text: food sample


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: INRA

text: public

text: stephane CHAILLOU

text: Beef carpaccio

text: beef carpaccio

text: Leuconostoc gelidum subsp. gasicomitatum

text: food sample


text: INRA

characteristic: INSDC center name

characteristic: INSDC last update

text: public

text: Chaillou

text: Horse fresh meat

text: Fresh horse meat

text: Brochothrix thermosphacta

text: Brochothrix thermosphacta

text: food sample


text: INRA

text: public

characteristic: INSDC status

characteristic: SRA accession

text: stephane CHAILLOU

text: beef carpaccio

text: Beef carpaccio

text: Carnobacterium divergens

text: Carnobacterium divergens

text: food sample


text: Oesophagus

characteristic: ArrayExpress-PHENOTYPE

text: male

characteristic: ArrayExpress-SEX

text: Rattus norvegicus

characteristic: ArrayExpress-SPECIES

characteristic: External Id

text: SC

text: public

characteristic: Submitter Id

text: Norway rat

characteristic: common name

text: Male

characteristic: gender

text: Rattus norvegicus

text: Oesophagus

characteristic: phenotype

text: Rattus norvegicus

characteristic: subject id


text: Tongue

text: male

text: Rattus norvegicus

characteristic: ENA-CHECKLIST

text: SC

characteristic: INSDC first public

text: public

text: Norway rat

text: Male

text: Rattus norvegicus

characteristic: organism

text: Tongue

text: Rattus norvegicus

characteristic: title


text: Spleen

text: male

text: Rattus norvegicus

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

characteristic: INSDC center name

text: public

text: Norway rat

text: Male

text: Rattus norvegicus

text: Spleen

text: Rattus norvegicus


text: Saolta

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: IRL

characteristic: SRA accession

characteristic: collection date

text: Klebsiella

characteristic: genus

text: Ireland

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: host

text: Homo sapiens

characteristic: host scientific name

characteristic: isolate

text: Human

characteristic: isolation source

text: gastrointestinal system

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

type: AMR curated data - CABBAGE

value: cefpodoxime-clavulanic acid

value: EUCAST

value: broth dilution

value: Vitek

value: susceptible

value: Klebsiella pneumoniae

value: tobramycin

value: amikacin

value: cefpodoxime

value: tigecycline

value: piperacillin-tazobactam

value: resistant

value: cefoxitin

value: amoxicillin-clavulanic acid

value: ampicillin

value: meropenem

value: gentamicin

value: cefotaxime


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Saolta

text: public

characteristic: Submitter Id

text: Ireland

text: Homo sapiens

text: Human

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: IMPERIAL COLLEGE LONDON

characteristic: INSDC first public

text: public

tag: Namespace:IMPERIAL COLLEGE LONDON

text: Staphylococcus aureus

characteristic: organism

text: Staphylococcus aureus

text: Staphylococcus aureus

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UMCU

characteristic: INSDC center name

text: public

text: Netherlands

text: diseased

characteristic: host health state

text: homo sapiens

text: Human

text: Enterococcus faecium

text: Enterococcus faecium

text: Enterococcus faecium


text: WUR

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: USA

text: Bos Taurus

text: Bos taurus

text: Desulfovibrio sp. G11

text: Desulfovibrio sp. G11

text: Genome sequence of Desulfovibrio sp. G11


text: Saolta

text: public

text: IRL

characteristic: collection date

text: Klebsiella

characteristic: genus

text: Ireland

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: host

text: Homo sapiens

text: Human

text: blood

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

value: EUCAST

value: cefpodoxime-clavulanic acid


characteristic: ENA-CHECKLIST

text: Saolta

text: public

text: IRL

text: Klebsiella

text: Ireland

text: Homo sapiens

text: Homo sapiens

characteristic: host scientific name

characteristic: isolate

text: Human

characteristic: isolation source

text: urinary tract

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

value: broth dilution

value: Vitek


characteristic: External Id

text: Saolta

characteristic: INSDC first public

text: public

text: IRL

characteristic: Submitter Id

text: Klebsiella

text: Ireland

text: Homo sapiens

text: Homo sapiens

text: Human

text: gastrointestinal system

text: Klebsiella pneumoniae

characteristic: organism

text: Klebsiella pneumoniae

value: Klebsiella pneumoniae

value: intermediate


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSIDAD DE CHILE

characteristic: INSDC center name

text: public

tag: Namespace:UNIVERSIDAD DE CHILE

text: 16S rRNA from Stool samples from Chilean Children

characteristic: description

text: children

characteristic: environment (biome)

text: gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Chile

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

text: Bacterial microbiota strains associated with diarrheogenic E. coli infection promotes fimbrial-mediated adherence and inflammation induction of Enteroaggregative and Shiga Toxin-producing E. coli to intestinal cells

characteristic: project name

text: human gut metagenome

text: 454 GS FLX+

characteristic: sequencing method

text: gut microbiota from Chilean Children

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: AALBORG UNIVERSITY

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Files containing sequences from all or most samples in the project.

text: metagenome

text: metagenome


text: Myeloid cells

text: Bone marrow

text: Mus musculus

characteristic: ArrayExpress-SPECIES

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: house mouse

characteristic: common name

text: Mus musculus

characteristic: organism

text: Mus musculus

characteristic: subject id


text: male

characteristic: ArrayExpress-SEX

text: Homo sapiens

text: SC

text: public

text: human

text: Male

characteristic: gender

text: Homo sapiens

text: Homo sapiens


E-MTAB-6036:Sample 1

text: public

text: E-MTAB-6036:Sample 1

tag: Namespace:Laboratory of Molecular Cytogenetics, Institute of Experimental Biology, Faculty of Science, Masaryk University Brno, Czech republic

text: ArrayExpress

characteristic: broker name

text: plasma cell

characteristic: cell type

text: human

text: Protocols: Female patient was diagnosed with MM in the Department of Internal Medicine - Hematooncology (IHOK), University Hospital Brno, in 11/2007. Patient’s biological material was obtained after she signed the informed consent form approved by the Ethical committee of the hospital Plasma cells (CD138+) a were obtained from the bone marrow of multiple myeloma patients during routine clinical procedure. Plasma cells (CD138+) in mononuclear cell fraction were enriched by anti-CD138 immunomagnetic beads and sorted using magnetic activated cell sorting, MACS (AutoMACS, Miltenyi Biotec). Purity of CD138+ fraction was measured by flowcytometry. Genomic DNA was extracted from sorted cells sing the Puregene Core kit according to manufacturer´s protocol. Extracted gDNA was diluted in TE buffer and stored in -20C. The capture probes are based on ultra-long RNA baits (120 nucleotides) with high sensitivity and specificity for the detection of SNPs and indels. Probe design captures all the coding regions of 42 genes including splicing sequences plus exonic hotspots of an additional 20 genes.

characteristic: description

text: multiple myeloma

characteristic: disease

text: NRAS mutation c.181C>A; p.Gln61Lys

characteristic: genotype

text: Homo sapiens

text: Homo sapiens

text: bone marrow

characteristic: organism part

text: CD138 positive

characteristic: phenotype

text: Homo sapiens

text: female

characteristic: sex

text: Sample 1

characteristic: title


text: synthetic construct

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: synthetic construct

text: synthetic construct

text: synthetic construct


text: hermaphrodite

characteristic: ArrayExpress-SEX

text: Caenorhabditis elegans

text: SC

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: Caenorhabditis elegans

characteristic: common name

text: Hermaphrodite

characteristic: gender

text: Caenorhabditis elegans

characteristic: organism

text: Caenorhabditis elegans

characteristic: subject id


text: UNIVERSITY OF FLORENCE

text: public

tag: Namespace:UNIVERSITY OF FLORENCE

text: human

text: pediatric patients

characteristic: host scientific name

text: Homo sapiens

text: Homo sapiens

text: IBD fecal microbiota

characteristic: title


text: hermaphrodite

text: Caenorhabditis elegans

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

text: SC

text: public

text: Caenorhabditis elegans

text: Hermaphrodite

text: Caenorhabditis elegans

text: Caenorhabditis elegans

text: Caenorhabditis elegans


text: Staphylococcus sciuri

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: Staphylococcus sciuri

text: Staphylococcus sciuri

text: Staphylococcus sciuri


characteristic: External Id

text: CENTRE FOR GEOGENETICS

characteristic: INSDC first public

text: public

tag: Namespace:CENTRE FOR GEOGENETICS

text: horse

text: Equus caballus

text: Equus caballus


text: WAGENINGEN UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:WAGENINGEN UNIVERSITY

text: The genome sequence of Eubacterium hallii L2-7 was done using PacBio RS II instrument using P4/C2 chemistry.

characteristic: description

text: [Eubacterium] hallii

text: [Eubacterium] hallii

text: Genome of Eubacterium hallii L2-7


Library 2 - C288S

text: KING'S COLLEGE LONDON

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: Library 2 - C288S

tag: Namespace:KING'S COLLEGE LONDON

text: Free 3' termini of HIV-1 reverse transcripts

text: HIV-1 06TG.HT008

text: HIV-1 06TG.HT008

text: Hiv-1 Reverse transcripts


Library 2 - C291S

text: KING'S COLLEGE LONDON

text: public

text: Library 2 - C291S

characteristic: Submitter Id

text: HIV-1 06TG.HT008

text: HIV-1 06TG.HT008

text: Hiv-1 Reverse transcripts


Library 2 - E259Q

text: KING'S COLLEGE LONDON

text: public

text: Library 2 - E259Q

text: HIV-1 06TG.HT008

text: HIV-1 06TG.HT008

text: Hiv-1 Reverse transcripts


Library 2 - high A3G ctr(P)-ctr(T)

text: KING'S COLLEGE LONDON

text: public

text: Library 2 - high A3G ctr(P)-ctr(T)

text: HIV-1 06TG.HT008

text: HIV-1 06TG.HT008

text: Hiv-1 Reverse transcripts


Library 2 - high A3G ctr(P)-hUGI(T)

text: KING'S COLLEGE LONDON

text: public

text: Library 2 - high A3G ctr(P)-hUGI(T)

text: HIV-1 06TG.HT008

text: HIV-1 06TG.HT008

text: Hiv-1 Reverse transcripts


Library 2 - high A3G Figure S5

text: KING'S COLLEGE LONDON

text: public

text: Library 2 - high A3G Figure S5

text: HIV-1 06TG.HT008

text: HIV-1 06TG.HT008

text: Hiv-1 Reverse transcripts


Library 2 - high A3G hUGI(P)-ctr(T)

text: KING'S COLLEGE LONDON

text: public

text: Library 2 - high A3G hUGI(P)-ctr(T)

text: HIV-1 06TG.HT008

text: HIV-1 06TG.HT008

text: Hiv-1 Reverse transcripts


Library 2 - high A3G hUGI(P)-hUGI(T)

text: KING'S COLLEGE LONDON

text: public

text: Library 2 - high A3G hUGI(P)-hUGI(T)

text: HIV-1 06TG.HT008

text: HIV-1 06TG.HT008

text: Hiv-1 Reverse transcripts


Library 2 - low A3G ctr(P)-ctr(T)

text: KING'S COLLEGE LONDON

text: public

text: Library 2 - low A3G ctr(P)-ctr(T)

text: 3' termini of determination of HIV-1 reverse transcripts

text: HIV-1 06TG.HT008

text: HIV-1 06TG.HT008

text: HIV-1 reverse transcripts


name: Library 2 - low A3G ctr(P)-hUGI(T) part1

text: KING'S COLLEGE LONDON

text: public

text: HIV-1 06TG.HT008

text: HIV-1 06TG.HT008

text: HIV-1 reverse transcripts


name: Library 2 - low A3G ctr(P)-hUGI(T) part2

text: KING'S COLLEGE LONDON

text: public

text: HIV-1 06TG.HT008

text: HIV-1 06TG.HT008

text: HIV-1 reverse transcripts


Library 2 - low A3G hUGI(P)-ctr(T)

text: KING'S COLLEGE LONDON

text: public

text: Library 2 - low A3G hUGI(P)-ctr(T)

text: HIV-1 06TG.HT008

text: HIV-1 06TG.HT008

text: HIV-1 reverse transcripts


Library 2 - low A3G hUGI(P)-hUGI(T)

text: KING'S COLLEGE LONDON

text: public

text: Library 2 - low A3G hUGI(P)-hUGI(T)

text: HIV-1 06TG.HT008

text: HIV-1 06TG.HT008

text: HIV-1 reverse transcripts


Library 2 - low A3G L35A

text: KING'S COLLEGE LONDON

text: public

text: Library 2 - low A3G L35A

text: HIV-1 06TG.HT008

text: HIV-1 06TG.HT008

text: HIV-1 reverse transcripts


Library 2 - low A3G R24A

text: KING'S COLLEGE LONDON

text: public

text: Library 2 - low A3G R24A

text: HIV-1 06TG.HT008

text: HIV-1 06TG.HT008

text: HIV-1 reverse transcripts


Library 2 - low A3G wt

text: KING'S COLLEGE LONDON

text: public

text: Library 2 - low A3G wt

text: HIV-1 06TG.HT008

text: HIV-1 06TG.HT008

text: HIV-1 reverse transcripts


Library 2 - no A3G Figure 8

text: KING'S COLLEGE LONDON

text: public

text: Library 2 - no A3G Figure 8

text: HIV-1 06TG.HT008

text: HIV-1 06TG.HT008

text: HIV-1 reverse transcripts


Library 2 - NoA3G ctrl(P)-ctr(T)

text: KING'S COLLEGE LONDON

text: public

text: Library 2 - NoA3G ctrl(P)-ctr(T)

text: HIV-1 06TG.HT008

text: HIV-1 06TG.HT008

text: HIV-1 reverse transcripts


text: WUR

text: public

text: USA

characteristic: geographic location (country and/or sea)

text: Bos Taurus

text: Bos Taurus

characteristic: isolation source

text: Desulfovibrio sp. G11

text: Desulfovibrio sp. G11

text: Genome sequence of Desulfovibrio sp. G11, PacBio


text: public

characteristic: collection date

text: oilfield

characteristic: environment (biome)

text: clay and silit

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: China

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: uncultured bacterium

characteristic: organism

text: DGGE

characteristic: project name

text: uncultured bacterium

text: ABI Prism 3730XL automated fluorescence sequencer

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: Response of microbial community and metabolic genes on the petroleum hydrocarbons contaminated soil by column simulation in Dagang Oilfield, China


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: oilfield

text: clay and silit

text: soil

text: China

text: mimarks-survey

text: uncultured alpha proteobacterium

text: DGGE

text: uncultured alpha proteobacterium

text: soil

characteristic: title


text: public

characteristic: Submitter Id

characteristic: collection date

text: oilfield

characteristic: environment (biome)

text: clay and silit

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

text: mimarks-survey

text: uncultured Burkholderia sp.

text: DGGE

text: uncultured Burkholderia sp.

text: soil


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: oilfield

text: clay and silit

text: soil

text: China

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: Bacillus sp. DSM 5850

characteristic: organism

text: DGGE

characteristic: project name

text: Bacillus sp. DSM 5850

characteristic: sequencing method

text: soil

characteristic: soil environmental package


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: oilfield

text: clay and silit

text: soil

text: China

text: mimarks-survey

text: uncultured Pseudomonas sp.

text: DGGE

text: uncultured Pseudomonas sp.

text: soil

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

tag: Namespace:OREGON STATE UNIVERSITY , CORVALLIS, OREGON, UNITED STATES

text: harbor seal

characteristic: environment (biome)

text: brain

characteristic: environment (feature)

text: tissue

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

text: Phocid alphaherpesvirus 1

text: deep sequencing for phHV-1

text: Phocid alphaherpesvirus 1

text: Illumina 2500

text: A draft genome combined with transcriptomics reveals unique aspects of Phocine herpesvirus-1 infections in the brains of harbor seals


text: Anopheles gambiae

characteristic: ArrayExpress-SPECIES

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: African malaria mosquito

characteristic: common name

text: Anopheles gambiae

characteristic: organism

text: Anopheles gambiae

characteristic: subject id


text: UNIVERSITY OF SOUTHERN CALIFORNIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:UNIVERSITY OF SOUTHERN CALIFORNIA

characteristic: Submitter Id

text: seawater metagenome

text: Pacific Ocean

text: 4.6681 m

characteristic: geographic location (depth)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: seawater metagenome

characteristic: project name

text: seawater metagenome

text: PE Illumina Miseq 2x300

characteristic: sequencing method

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

characteristic: collection date

text: seawater metagenome

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: Pacific Ocean

characteristic: geographic location (country and/or sea)

text: 4.6681 m

characteristic: geographic location (latitude)

text: metagenome

text: seawater metagenome

text: seawater metagenome

text: PE Illumina Miseq 2x301

characteristic: title

text: water


characteristic: External Id

text: UNIVERSITY OF SOUTHERN CALIFORNIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: seawater metagenome

characteristic: common name

text: Pacific Ocean

text: 8.653857 m

text: metagenome

text: seawater metagenome

characteristic: organism

text: seawater metagenome

text: PE Illumina Miseq 2x304

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: seawater metagenome

text: Pacific Ocean

text: 8.653857 m

characteristic: geographic location (depth)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: seawater metagenome

characteristic: project name

text: seawater metagenome

text: PE Illumina Miseq 2x305

characteristic: sequencing method

text: water

characteristic: water environmental package


characteristic: External Id

text: UNIVERSITY OF SOUTHERN CALIFORNIA

characteristic: INSDC center name

text: public

characteristic: collection date

text: seawater metagenome

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: Pacific Ocean

characteristic: geographic location (country and/or sea)

text: 8.653857 m

characteristic: geographic location (latitude)

text: metagenome

text: seawater metagenome

text: seawater metagenome

text: PE Illumina Miseq 2x306

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF SOUTHERN CALIFORNIA

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: seawater metagenome

characteristic: common name

text: Pacific Ocean

text: 8.653857 m

text: metagenome

text: seawater metagenome

characteristic: organism

text: seawater metagenome

text: PE Illumina Miseq 2x307

text: water


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF SOUTHERN CALIFORNIA

characteristic: INSDC center name

text: public

text: seawater metagenome

text: Pacific Ocean

text: 4.515 m

characteristic: geographic location (depth)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: seawater metagenome

characteristic: project name

text: seawater metagenome

text: PE Illumina Miseq 2x308

characteristic: sequencing method

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

characteristic: collection date

text: seawater metagenome

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: Pacific Ocean

characteristic: geographic location (country and/or sea)

text: 4.515 m

characteristic: geographic location (latitude)

text: metagenome

text: seawater metagenome

text: seawater metagenome

text: PE Illumina Miseq 2x309

characteristic: title

text: water


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF SOUTHERN CALIFORNIA

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: seawater metagenome

characteristic: common name

text: Pacific Ocean

text: 4.515 m

text: metagenome

text: seawater metagenome

characteristic: organism

text: seawater metagenome

text: PE Illumina Miseq 2x310

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF SOUTHERN CALIFORNIA

characteristic: INSDC center name

text: public

text: seawater metagenome

text: Pacific Ocean

text: 4.515 m

characteristic: geographic location (depth)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: seawater metagenome

characteristic: project name

text: seawater metagenome

text: PE Illumina Miseq 2x311

characteristic: sequencing method

text: water

characteristic: water environmental package


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

characteristic: collection date

text: seawater metagenome

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: Pacific Ocean

characteristic: geographic location (country and/or sea)

text: 3.819778 m

characteristic: geographic location (latitude)

text: metagenome

text: seawater metagenome

text: seawater metagenome

text: PE Illumina Miseq 2x312

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF SOUTHERN CALIFORNIA

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: seawater metagenome

characteristic: common name

text: Pacific Ocean

text: 3.819778 m

text: metagenome

text: seawater metagenome

characteristic: organism

text: seawater metagenome

text: PE Illumina Miseq 2x313

text: water


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF SOUTHERN CALIFORNIA

characteristic: INSDC center name

text: public

text: seawater metagenome

text: Pacific Ocean

text: 3.819778 m

characteristic: geographic location (depth)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: seawater metagenome

characteristic: project name

text: seawater metagenome

text: PE Illumina Miseq 2x314

characteristic: sequencing method

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

characteristic: collection date

text: seawater metagenome

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: Pacific Ocean

characteristic: geographic location (country and/or sea)

text: 3.4568 m

characteristic: geographic location (latitude)

text: metagenome

text: seawater metagenome

text: seawater metagenome

text: PE Illumina Miseq 2x316

characteristic: title

text: water


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF SOUTHERN CALIFORNIA

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: seawater metagenome

characteristic: common name

text: Pacific Ocean

text: 3.4568 m

text: metagenome

text: seawater metagenome

characteristic: organism

text: seawater metagenome

text: PE Illumina Miseq 2x318

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF SOUTHERN CALIFORNIA

characteristic: INSDC center name

text: public

text: seawater metagenome

text: Pacific Ocean

text: 3.4568 m

characteristic: geographic location (depth)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: seawater metagenome

characteristic: project name

text: seawater metagenome

text: PE Illumina Miseq 2x319

characteristic: sequencing method

text: water

characteristic: water environmental package


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

characteristic: collection date

text: seawater metagenome

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: Pacific Ocean

characteristic: geographic location (country and/or sea)

text: 3.3036 m

characteristic: geographic location (latitude)

text: metagenome

text: seawater metagenome

text: seawater metagenome

text: PE Illumina Miseq 2x320

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF SOUTHERN CALIFORNIA

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: seawater metagenome

characteristic: common name

text: Pacific Ocean

text: 3.3036 m

text: metagenome

text: seawater metagenome

characteristic: organism

text: seawater metagenome

text: PE Illumina Miseq 2x321

text: water


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF SOUTHERN CALIFORNIA

characteristic: INSDC center name

text: public

text: seawater metagenome

text: Pacific Ocean

text: 3.3036 m

characteristic: geographic location (depth)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: seawater metagenome

characteristic: project name

text: seawater metagenome

text: PE Illumina Miseq 2x322

characteristic: sequencing method

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

characteristic: collection date

text: seawater metagenome

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: Pacific Ocean

characteristic: geographic location (country and/or sea)

text: 3.3036 m

characteristic: geographic location (latitude)

text: metagenome

text: seawater metagenome

text: seawater metagenome

text: PE Illumina Miseq 2x323

characteristic: title

text: water


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF SOUTHERN CALIFORNIA

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: seawater metagenome

characteristic: common name

text: Pacific Ocean

text: 6.886889 m

text: metagenome

text: seawater metagenome

characteristic: organism

text: seawater metagenome

text: PE Illumina Miseq 2x324

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF SOUTHERN CALIFORNIA

characteristic: INSDC center name

text: public

text: seawater metagenome

text: Pacific Ocean

text: 6.886889 m

characteristic: geographic location (depth)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: seawater metagenome

characteristic: project name

text: seawater metagenome

text: PE Illumina Miseq 2x325

characteristic: sequencing method

text: water

characteristic: water environmental package


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

characteristic: collection date

text: seawater metagenome

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: Pacific Ocean

characteristic: geographic location (country and/or sea)

text: 6.886889 m

characteristic: geographic location (latitude)

text: metagenome

text: seawater metagenome

text: seawater metagenome

text: PE Illumina Miseq 2x326

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF SOUTHERN CALIFORNIA

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: seawater metagenome

characteristic: common name

text: Pacific Ocean

text: 6.886889 m

text: metagenome

text: seawater metagenome

characteristic: organism

text: seawater metagenome

text: PE Illumina Miseq 2x327

text: water


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF SOUTHERN CALIFORNIA

characteristic: INSDC center name

text: public

text: seawater metagenome

text: Pacific Ocean

text: 11.501875 m

characteristic: geographic location (depth)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: seawater metagenome

characteristic: project name

text: seawater metagenome

text: PE Illumina Miseq 2x328

characteristic: sequencing method

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

characteristic: collection date

text: seawater metagenome

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: Pacific Ocean

characteristic: geographic location (country and/or sea)

text: 11.501875 m

characteristic: geographic location (latitude)

text: metagenome

text: seawater metagenome

text: seawater metagenome

text: PE Illumina Miseq 2x329

characteristic: title

text: water


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF SOUTHERN CALIFORNIA

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: seawater metagenome

characteristic: common name

text: Pacific Ocean

text: 11.501875 m

text: metagenome

text: seawater metagenome

characteristic: organism

text: seawater metagenome

text: PE Illumina Miseq 2x330

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF SOUTHERN CALIFORNIA

characteristic: INSDC center name

text: public

text: seawater metagenome

text: Pacific Ocean

text: 11.501875 m

characteristic: geographic location (depth)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: seawater metagenome

characteristic: project name

text: seawater metagenome

text: PE Illumina Miseq 2x331

characteristic: sequencing method

text: water

characteristic: water environmental package


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

characteristic: collection date

text: seawater metagenome

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: Pacific Ocean

characteristic: geographic location (country and/or sea)

text: 8.715778 m

characteristic: geographic location (latitude)

text: metagenome

text: seawater metagenome

text: seawater metagenome

text: PE Illumina Miseq 2x332

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF SOUTHERN CALIFORNIA

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: seawater metagenome

characteristic: common name

text: Pacific Ocean

text: 8.715778 m

text: metagenome

text: seawater metagenome

characteristic: organism

text: seawater metagenome

text: PE Illumina Miseq 2x333

text: water


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF SOUTHERN CALIFORNIA

characteristic: INSDC center name

text: public

text: seawater metagenome

text: Pacific Ocean

text: 8.715778 m

characteristic: geographic location (depth)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: seawater metagenome

characteristic: project name

text: seawater metagenome

text: PE Illumina Miseq 2x334

characteristic: sequencing method

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

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