F1N3C2 run 140627 Miseq

characteristic: ENA-CHECKLIST

text: CSISP

text: public

text: F1N3C2 run 140627 Miseq

text: Human associated habitat

text: Human gut

text: feces

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

characteristic: project name

text: human gut metagenome

text: Illumina MiSeq v3

characteristic: sequencing method


F1N3C2 run 141020 Miseq

status: PUBLIC

tag: attribute

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSISP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: F1N3C2 run 141020 Miseq

characteristic: Submitter Id

characteristic: collection date

text: Human associated habitat

characteristic: environment (biome)

text: Human gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Spain

characteristic: geographic location (country and/or sea)

unit: DD

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: organism

text: Interplay between gut microbiota metabolism and inflammation in HIV infection

text: human gut metagenome

text: Illumina MiSeq v3

characteristic: title


F1N4BIV run 140627 Miseq

characteristic: ENA-CHECKLIST

text: CSISP

text: public

text: F1N4BIV run 140627 Miseq

text: Human associated habitat

text: Human gut

text: feces

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

characteristic: project name

text: human gut metagenome

text: Illumina MiSeq v3

characteristic: sequencing method


F1N4BIV run 141020 Miseq

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSISP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: F1N4BIV run 141020 Miseq

text: Human associated habitat

text: Human gut

text: feces

text: Spain

text: human-gut

text: metagenome

text: human gut metagenome

text: human gut metagenome

text: Illumina MiSeq v3


F1N5CIV run 140627 Miseq

text: CSISP

text: public

characteristic: SRA accession

text: F1N5CIV run 140627 Miseq

characteristic: Submitter Id

characteristic: collection date

text: Human associated habitat

characteristic: environment (biome)

text: Human gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Spain

characteristic: geographic location (country and/or sea)

text: human-gut

text: metagenome

text: human gut metagenome

text: human gut metagenome

text: Illumina MiSeq v3


F1N5CIV run 141020 Miseq

characteristic: ENA-CHECKLIST

text: CSISP

text: public

text: F1N5CIV run 141020 Miseq

text: Human associated habitat

text: Human gut

text: feces

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

characteristic: organism

text: human gut metagenome

text: Illumina MiSeq v3

characteristic: title


F1N6B11 run 140627 Miseq

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSISP

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: F1N6B11 run 140627 Miseq

text: Human associated habitat

text: Human gut

text: feces

text: Spain

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: project name

text: human gut metagenome

text: Illumina MiSeq v3

characteristic: sequencing method


F1N6B11 run 141020 Miseq

text: CSISP

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: F1N6B11 run 141020 Miseq

characteristic: Submitter Id

characteristic: collection date

text: Human associated habitat

characteristic: environment (biome)

text: Human gut

characteristic: environment (feature)

text: feces

text: Spain

text: human-gut

text: metagenome

text: human gut metagenome

text: human gut metagenome

text: Illumina MiSeq v3


F1N7BVI run 140627 Miseq

characteristic: ENA-CHECKLIST

text: CSISP

text: public

text: F1N7BVI run 140627 Miseq

text: Human associated habitat

text: Human gut

text: feces

characteristic: environment (material)

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

text: human gut metagenome

text: Illumina MiSeq v3


F1N8BVII run 140627 Miseq

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSISP

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: F1N8BVII run 140627 Miseq

text: Human associated habitat

text: Human gut

text: feces

text: Spain

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: organism

text: human gut metagenome

text: Illumina MiSeq v3

characteristic: title


F1N8BVII run 141020 Miseq

text: CSISP

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: F1N8BVII run 141020 Miseq

characteristic: Submitter Id

characteristic: collection date

text: Human associated habitat

text: Human gut

text: feces

text: Spain

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: project name

text: human gut metagenome

text: Illumina MiSeq v3

characteristic: sequencing method


F1N9CIII run 140627 Miseq

characteristic: ENA-CHECKLIST

text: CSISP

text: public

text: F1N9CIII run 140627 Miseq

text: Human associated habitat

characteristic: environment (biome)

text: Human gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

text: metagenome

text: human gut metagenome

text: human gut metagenome

text: Illumina MiSeq v3


F1N9CIII run 141020 Miseq

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSISP

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: F1N9CIII run 141020 Miseq

text: Human associated habitat

text: Human gut

text: feces

text: Spain

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

text: human gut metagenome

text: Illumina MiSeq v3


F1N10BV run 140627 Miseq

text: CSISP

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: F1N10BV run 140627 Miseq

characteristic: Submitter Id

characteristic: collection date

text: Human associated habitat

text: Human gut

text: feces

text: Spain

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: organism

text: human gut metagenome

text: Illumina MiSeq v3

characteristic: title


F1N11DVI run 140627 Miseq

characteristic: ENA-CHECKLIST

text: CSISP

text: public

text: F1N11DVI run 140627 Miseq

text: Human associated habitat

characteristic: environment (biome)

text: Human gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Spain

characteristic: geographic location (country and/or sea)

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: project name

text: human gut metagenome

text: Illumina MiSeq v3

characteristic: sequencing method


F1N12BIX run 140627 Miseq

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSISP

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: F1N12BIX run 140627 Miseq

text: Human associated habitat

text: Human gut

text: feces

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

text: metagenome

text: human gut metagenome

text: human gut metagenome

text: Illumina MiSeq v3


F1N13CI run 140627 Miseq

text: CSISP

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: F1N13CI run 140627 Miseq

characteristic: Submitter Id

characteristic: collection date

text: Human associated habitat

text: Human gut

text: feces

text: Spain

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

text: human gut metagenome

text: Illumina MiSeq v3


F1N14BX run 140627 Miseq

characteristic: ENA-CHECKLIST

text: CSISP

text: public

text: F1N14BX run 140627 Miseq

text: Human associated habitat

characteristic: environment (biome)

text: Human gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Spain

characteristic: geographic location (country and/or sea)

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: organism

text: human gut metagenome

text: Illumina MiSeq v3

characteristic: title


F1N15BVIII run 140627 Miseq

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSISP

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: F1N15BVIII run 140627 Miseq

text: Human associated habitat

text: Human gut

text: feces

text: Spain

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: project name

text: human gut metagenome

text: Illumina MiSeq v3

characteristic: sequencing method


F1N16BXII run 140627 Miseq

text: CSISP

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: F1N16BXII run 140627 Miseq

characteristic: Submitter Id

characteristic: collection date

text: Human associated habitat

text: Human gut

text: feces

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

text: metagenome

text: human gut metagenome

text: human gut metagenome

text: Illumina MiSeq v3


F1N17DVII run 141020 Miseq

characteristic: ENA-CHECKLIST

text: CSISP

text: public

text: F1N17DVII run 141020 Miseq

text: Human associated habitat

characteristic: environment (biome)

text: Human gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Spain

characteristic: geographic location (country and/or sea)

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

text: human gut metagenome

text: Illumina MiSeq v3


F1N18BIX run 140627 Miseq

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSISP

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: F1N18BIX run 140627 Miseq

text: Human associated habitat

text: Human gut

text: feces

text: Spain

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: organism

text: human gut metagenome

text: Illumina MiSeq v3

characteristic: title


F1N19BXIV run 140627 Miseq

text: CSISP

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: F1N19BXIV run 140627 Miseq

characteristic: Submitter Id

characteristic: collection date

text: Human associated habitat

text: Human gut

text: feces

text: Spain

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: project name

text: human gut metagenome

text: Illumina MiSeq v3

characteristic: sequencing method


F1N20BXV run 140627 Miseq

characteristic: ENA-CHECKLIST

text: CSISP

text: public

text: F1N20BXV run 140627 Miseq

text: Human associated habitat

characteristic: environment (biome)

text: Human gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

text: metagenome

text: human gut metagenome

text: human gut metagenome

text: Illumina MiSeq v3


F1N20BXV run 141020 Miseq

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSISP

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: F1N20BXV run 141020 Miseq

text: Human associated habitat

text: Human gut

text: feces

text: Spain

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

text: human gut metagenome

text: Illumina MiSeq v3


F1N21DIV run 140627 Miseq

text: CSISP

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: F1N21DIV run 140627 Miseq

characteristic: Submitter Id

characteristic: collection date

text: Human associated habitat

text: Human gut

text: feces

text: Spain

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: organism

text: human gut metagenome

text: Illumina MiSeq v3

characteristic: title


F1N22CIX run 140627 Miseq

characteristic: ENA-CHECKLIST

text: CSISP

text: public

text: F1N22CIX run 140627 Miseq

text: Human associated habitat

characteristic: environment (biome)

text: Human gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Spain

characteristic: geographic location (country and/or sea)

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: project name

text: human gut metagenome

text: Illumina MiSeq v3

characteristic: sequencing method


F1N22CIX run 141020 Miseq

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSISP

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: F1N22CIX run 141020 Miseq

text: Human associated habitat

text: Human gut

text: feces

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

text: metagenome

text: human gut metagenome

text: human gut metagenome

text: Illumina MiSeq v3


F1N23DXII run 140627 Miseq

text: CSISP

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: F1N23DXII run 140627 Miseq

characteristic: Submitter Id

characteristic: collection date

text: Human associated habitat

text: Human gut

text: feces

text: Spain

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

text: human gut metagenome

text: Illumina MiSeq v3


F1N24BXIII run 140627 Miseq

characteristic: ENA-CHECKLIST

text: CSISP

text: public

text: F1N24BXIII run 140627 Miseq

text: Human associated habitat

characteristic: environment (biome)

text: Human gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Spain

characteristic: geographic location (country and/or sea)

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: organism

text: human gut metagenome

text: Illumina MiSeq v3

characteristic: title


F1N25CXV run 140627 Miseq

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSISP

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: F1N25CXV run 140627 Miseq

text: Human associated habitat

text: Human gut

text: feces

text: Spain

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: project name

text: human gut metagenome

text: Illumina MiSeq v3

characteristic: sequencing method


F1N25CXV run 141020 Miseq

text: CSISP

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: F1N25CXV run 141020 Miseq

characteristic: Submitter Id

characteristic: collection date

text: Human associated habitat

text: Human gut

text: feces

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

text: metagenome

text: human gut metagenome

text: human gut metagenome

text: Illumina MiSeq v3


F1N26BXI run 140627 Miseq

characteristic: ENA-CHECKLIST

text: CSISP

text: public

text: F1N26BXI run 140627 Miseq

text: Human associated habitat

characteristic: environment (biome)

text: Human gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Spain

characteristic: geographic location (country and/or sea)

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

text: human gut metagenome

text: Illumina MiSeq v3


F1N27C13 run 140627 Miseq

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSISP

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: F1N27C13 run 140627 Miseq

text: Human associated habitat

text: Human gut

text: feces

text: Spain

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: organism

text: human gut metagenome

text: Illumina MiSeq v3

characteristic: title


F1N27C13 run 141020 Miseq

text: CSISP

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: F1N27C13 run 141020 Miseq

characteristic: Submitter Id

characteristic: collection date

text: Human associated habitat

text: Human gut

text: feces

text: Spain

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: project name

text: human gut metagenome

text: Illumina MiSeq v3

characteristic: sequencing method


F1N28DII run 140627 Miseq

characteristic: ENA-CHECKLIST

text: CSISP

text: public

text: F1N28DII run 140627 Miseq

text: Human associated habitat

characteristic: environment (biome)

text: Human gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

text: metagenome

text: human gut metagenome

text: human gut metagenome

text: Illumina MiSeq v3


F1N28DII run 141020 Miseq

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSISP

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: F1N28DII run 141020 Miseq

text: Human associated habitat

text: Human gut

text: feces

text: Spain

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

text: human gut metagenome

text: Illumina MiSeq v3


F1N29DXIV run 140627 Miseq

text: CSISP

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: F1N29DXIV run 140627 Miseq

characteristic: Submitter Id

characteristic: collection date

text: Human associated habitat

text: Human gut

text: feces

text: Spain

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: organism

text: human gut metagenome

text: Illumina MiSeq v3

characteristic: title


F1N29DXIV run 141020 Miseq

characteristic: ENA-CHECKLIST

text: CSISP

text: public

text: F1N29DXIV run 141020 Miseq

text: Human associated habitat

characteristic: environment (biome)

text: Human gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Spain

characteristic: geographic location (country and/or sea)

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: project name

text: human gut metagenome

text: Illumina MiSeq v3

characteristic: sequencing method


F1N30DXV run 140627 Miseq

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSISP

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: F1N30DXV run 140627 Miseq

text: Human associated habitat

text: Human gut

text: feces

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

text: metagenome

text: human gut metagenome

text: human gut metagenome

text: Illumina MiSeq v3


F1N31DV run 140627 Miseq

text: CSISP

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: F1N31DV run 140627 Miseq

characteristic: Submitter Id

characteristic: collection date

text: Human associated habitat

text: Human gut

text: feces

text: Spain

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

text: human gut metagenome

text: Illumina MiSeq v3


F1N31DV run 141020 Miseq

characteristic: ENA-CHECKLIST

text: CSISP

text: public

text: F1N31DV run 141020 Miseq

text: Human associated habitat

characteristic: environment (biome)

text: Human gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Spain

characteristic: geographic location (country and/or sea)

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: organism

text: human gut metagenome

text: Illumina MiSeq v3

characteristic: title


F1N32DIII run 140627 Miseq

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSISP

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: F1N32DIII run 140627 Miseq

text: Human associated habitat

text: Human gut

text: feces

text: Spain

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: project name

text: human gut metagenome

text: Illumina MiSeq v3

characteristic: sequencing method


F1N33B3 run 140627 Miseq

text: CSISP

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: F1N33B3 run 140627 Miseq

characteristic: Submitter Id

characteristic: collection date

text: Human associated habitat

text: Human gut

text: feces

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

text: metagenome

text: human gut metagenome

text: human gut metagenome

text: Illumina MiSeq v3


F1N33B3 run 141020 Miseq

characteristic: ENA-CHECKLIST

text: CSISP

text: public

text: F1N33B3 run 141020 Miseq

text: Human associated habitat

characteristic: environment (biome)

text: Human gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Spain

characteristic: geographic location (country and/or sea)

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

text: human gut metagenome

text: Illumina MiSeq v3


F1N34AXII run 140627 Miseq

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSISP

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: F1N34AXII run 140627 Miseq

text: Human associated habitat

text: Human gut

text: feces

text: Spain

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: organism

text: human gut metagenome

text: Illumina MiSeq v3

characteristic: title


F1N34AXII run 141020 Miseq

text: CSISP

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: F1N34AXII run 141020 Miseq

characteristic: Submitter Id

characteristic: collection date

text: Human associated habitat

text: Human gut

text: feces

text: Spain

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: project name

text: human gut metagenome

text: Illumina MiSeq v3

characteristic: sequencing method


F1N35AVI run 140627 Miseq

characteristic: ENA-CHECKLIST

text: CSISP

text: public

text: F1N35AVI run 140627 Miseq

text: Human associated habitat

characteristic: environment (biome)

text: Human gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

text: metagenome

text: human gut metagenome

text: human gut metagenome

text: Illumina MiSeq v3


F1N35AVI run 141020 Miseq

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSISP

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: F1N35AVI run 141020 Miseq

text: Human associated habitat

text: Human gut

text: feces

text: Spain

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

text: human gut metagenome

text: Illumina MiSeq v3


F1N36AXV run 140627 Miseq

text: CSISP

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: F1N36AXV run 140627 Miseq

characteristic: Submitter Id

characteristic: collection date

text: Human associated habitat

text: Human gut

text: feces

text: Spain

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: organism

text: human gut metagenome

text: Illumina MiSeq v3

characteristic: title


F1N37AXIV run 140627 Miseq

characteristic: ENA-CHECKLIST

text: CSISP

text: public

text: F1N37AXIV run 140627 Miseq

text: Human associated habitat

characteristic: environment (biome)

text: Human gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Spain

characteristic: geographic location (country and/or sea)

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: project name

text: human gut metagenome

text: Illumina MiSeq v3

characteristic: sequencing method


F1N38A4 run 140627 Miseq

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSISP

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: F1N38A4 run 140627 Miseq

text: Human associated habitat

text: Human gut

text: feces

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

text: metagenome

text: human gut metagenome

text: human gut metagenome

text: Illumina MiSeq v3


F1N39AV run 140627 Miseq

text: CSISP

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: F1N39AV run 140627 Miseq

characteristic: Submitter Id

characteristic: collection date

text: Human associated habitat

text: Human gut

text: feces

text: Spain

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

text: human gut metagenome

text: Illumina MiSeq v3


F1N40AVII run 140627 Miseq

characteristic: ENA-CHECKLIST

text: CSISP

text: public

text: F1N40AVII run 140627 Miseq

text: Human associated habitat

characteristic: environment (biome)

text: Human gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Spain

characteristic: geographic location (country and/or sea)

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: organism

text: human gut metagenome

text: Illumina MiSeq v3

characteristic: title


F1N44A11 run 140627 Miseq

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSISP

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: F1N44A11 run 140627 Miseq

text: Human associated habitat

text: Human gut

text: feces

text: Spain

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: project name

text: human gut metagenome

text: Illumina MiSeq v3

characteristic: sequencing method


F1N45DXI run 140627 Miseq

text: CSISP

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: F1N45DXI run 140627 Miseq

characteristic: Submitter Id

characteristic: collection date

text: Human associated habitat

text: Human gut

text: feces

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

text: metagenome

text: human gut metagenome

text: human gut metagenome

text: Illumina MiSeq v3


F1N46A2 run 140627 Miseq

characteristic: ENA-CHECKLIST

text: CSISP

text: public

text: F1N46A2 run 140627 Miseq

text: Human associated habitat

characteristic: environment (biome)

text: Human gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Spain

characteristic: geographic location (country and/or sea)

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

text: human gut metagenome

text: Illumina MiSeq v3


F1N47A13 run 140627 Miseq

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSISP

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: F1N47A13 run 140627 Miseq

text: Human associated habitat

text: Human gut

text: feces

text: Spain

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: organism

text: human gut metagenome

text: Illumina MiSeq v3

characteristic: title


F1N47A13 run 141020 Miseq

text: CSISP

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: F1N47A13 run 141020 Miseq

characteristic: Submitter Id

characteristic: collection date

text: Human associated habitat

text: Human gut

text: feces

text: Spain

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: project name

text: human gut metagenome

text: Illumina MiSeq v3

characteristic: sequencing method


F1N48DX run 140627 Miseq

characteristic: ENA-CHECKLIST

text: CSISP

text: public

text: F1N48DX run 140627 Miseq

text: Human associated habitat

characteristic: environment (biome)

text: Human gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

text: metagenome

text: human gut metagenome

text: human gut metagenome

text: Illumina MiSeq v3


F1N49DI run 140627 Miseq

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSISP

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: F1N49DI run 140627 Miseq

text: Human associated habitat

text: Human gut

text: feces

text: Spain

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

text: human gut metagenome

text: Illumina MiSeq v3


F1N50D13 run 140627 Miseq

text: CSISP

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: F1N50D13 run 140627 Miseq

characteristic: Submitter Id

characteristic: collection date

text: Human associated habitat

text: Human gut

text: feces

text: Spain

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: organism

text: human gut metagenome

text: Illumina MiSeq v3

characteristic: title


F1N51AI run 140627 Miseq

characteristic: ENA-CHECKLIST

text: CSISP

text: public

text: F1N51AI run 140627 Miseq

text: Human associated habitat

characteristic: environment (biome)

text: Human gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Spain

characteristic: geographic location (country and/or sea)

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: project name

text: human gut metagenome

text: Illumina MiSeq v3

characteristic: sequencing method


F1N51AI run 141020 Miseq

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSISP

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: F1N51AI run 141020 Miseq

text: Human associated habitat

text: Human gut

text: feces

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

text: metagenome

text: human gut metagenome

text: human gut metagenome

text: Illumina MiSeq v3


F1N52DVIII run 140627 Miseq

text: CSISP

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: F1N52DVIII run 140627 Miseq

characteristic: Submitter Id

characteristic: collection date

text: Human associated habitat

text: Human gut

text: feces

text: Spain

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

text: human gut metagenome

text: Illumina MiSeq v3


F1N53AIII run 140627 Miseq

characteristic: ENA-CHECKLIST

text: CSISP

text: public

text: F1N53AIII run 140627 Miseq

text: Human associated habitat

characteristic: environment (biome)

text: Human gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Spain

characteristic: geographic location (country and/or sea)

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: organism

text: human gut metagenome

text: Illumina MiSeq v3

characteristic: title


F1N54C5 run 140627 Miseq

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSISP

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: F1N54C5 run 140627 Miseq

text: Human associated habitat

text: Human gut

text: feces

text: Spain

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: project name

text: human gut metagenome

text: Illumina MiSeq v3

characteristic: sequencing method


F1N56B7 run 140627 Miseq

text: CSISP

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: F1N56B7 run 140627 Miseq

characteristic: Submitter Id

characteristic: collection date

text: Human associated habitat

text: Human gut

text: feces

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

text: metagenome

text: human gut metagenome

text: human gut metagenome

text: Illumina MiSeq v3


F1N58C10 run 140627 Miseq

characteristic: ENA-CHECKLIST

text: CSISP

text: public

text: F1N58C10 run 140627 Miseq

text: Human associated habitat

characteristic: environment (biome)

text: Human gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Spain

characteristic: geographic location (country and/or sea)

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

text: human gut metagenome

text: Illumina MiSeq v3


F1N60D9 run 140627 Miseq

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSISP

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: F1N60D9 run 140627 Miseq

text: Human associated habitat

text: Human gut

text: feces

text: Spain

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: organism

text: human gut metagenome

text: Illumina MiSeq v3

characteristic: title


text: Forensic and Scientific Services

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Forensic and Scientific Services

characteristic: Submitter Id

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

type: has member


text: Mouse

characteristic: ArrayExpress-PHENOTYPE

text: Mus musculus

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

text: SC

text: public

text: house mouse

characteristic: common name

text: Mus musculus

text: Mouse

characteristic: phenotype

text: Mus musculus

text: 36.8 PLKX

characteristic: subject id


text: Mouse

text: Mus musculus

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mouse

text: Mus musculus

text: 25.2 PLKX


text: Mouse

text: Mus musculus

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mouse

text: Mus musculus

text: 35.3 PLKX


characteristic: External Id

text: public

tag: Namespace:OKINAWA INSTITUTE OF SCIENCE AND TECHNOLOGY

characteristic: collection date

text: Samples were collected by Niskin bottles at 5 and 50m and then sequentially filtered over 10.0 um and 1.0 um filters. Filters were stored in etOH at -20C and DNA was extracted with the MoBio PowerWater DNA kit.

characteristic: description

text: Coastal

characteristic: environment (biome)

text: 50m, 1.75L, 10um filter

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: Yes

characteristic: environmental sample

text: Japan

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: uncultured eukaryote

text: Fwd: CCAGCASCYGCGGTAATTCC, Rev: ACTTTCGTTCTTGATYR

characteristic: pcr primers

text: uncultured eukaryote

characteristic: target gene

characteristic: target subfragment

text: Environmental Samples from Nago Bay, Okinawa from March 2015.


characteristic: ENA-CHECKLIST

text: OKINAWA INSTITUTE OF SCIENCE AND TECHNOLOGY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Samples were collected by Niskin bottles at 5 and 50m and then sequentially filtered over 10 um and 0.2 um filters. Filters were stored in etOH at -20C and DNA was extracted with the MoBio PowerWater DNA kit.

text: Coastal

text: 50m, 1.75L, 1um filter

text: water

text: Yes

text: Japan

text: uncultured eukaryote

characteristic: organism

text: uncultured eukaryote

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: collection date

characteristic: description

text: Coastal

characteristic: environment (biome)

text: 5m, 1.75L, 10um filter

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: Yes

text: Japan

text: uncultured eukaryote

text: uncultured eukaryote


characteristic: ENA-CHECKLIST

text: public

text: Coastal

text: 5m, 1.75L, 1um filter

text: water

text: Yes

characteristic: environmental sample

text: Japan

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: uncultured eukaryote

characteristic: pcr primers

text: uncultured eukaryote

characteristic: target gene

characteristic: target subfragment


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Coastal

text: 50m, 1.75L, 10um filter

text: water

text: Yes

text: Japan

text: uncultured eukaryote

characteristic: organism

text: uncultured eukaryote

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF ESSEX

text: public

tag: Namespace:UNIVERSITY OF ESSEX

text: Cefas Endeavour

characteristic: collected by

characteristic: collection date

text: bacterial 16S amplicons from marine sediment communities exposed to silver nanoparticles

characteristic: description

text: Yes

text: United Kingdom

text: marine sediment

characteristic: isolation source

text: 54.06 -3.87972222

characteristic: lat lon

text: unidentified

text: unidentified


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF ESSEX

text: public

text: Time5_uncappedSIlverNanoparticles0.05_rep1

text: Cefas Endeavour

text: Yes

characteristic: environmental sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: marine sediment

text: 54.06 -3.87972222

text: unidentified

text: unidentified


text: UNIVERSITY OF ESSEX

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Time5_uncappedSIlverNanoparticles0.05_rep2

text: Cefas Endeavour

text: Yes

text: United Kingdom

text: marine sediment

text: 54.06 -3.87972222

text: unidentified

text: unidentified


text: UNIVERSITY OF ESSEX

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Time5_uncappedSIlverNanoparticles0.05_rep3

characteristic: Submitter Id

text: Cefas Endeavour

text: Yes

text: United Kingdom

text: marine sediment

text: 54.06 -3.87972222

text: unidentified

text: unidentified


characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF ESSEX

text: public

text: Time5_uncappedSIlverNanoparticles0.5_rep1

text: Cefas Endeavour

text: Yes

text: United Kingdom

text: marine sediment

text: 54.06 -3.87972222

text: unidentified

characteristic: organism

text: unidentified

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF ESSEX

text: public

text: Time5_uncappedSIlverNanoparticles0.5_rep2

text: Cefas Endeavour

characteristic: collected by

text: Yes

text: United Kingdom

text: marine sediment

text: 54.06 -3.87972222

text: unidentified

text: unidentified


text: UNIVERSITY OF ESSEX

text: public

text: Time5_uncappedSIlverNanoparticles0.5_rep3

text: Cefas Endeavour

characteristic: collection date

characteristic: description

text: Yes

text: United Kingdom

text: marine sediment

characteristic: isolation source

text: 54.06 -3.87972222

text: unidentified

text: unidentified


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF ESSEX

text: public

text: Time5_CappedSIlverNanoparticles0.05_rep1

text: Cefas Endeavour

text: Yes

characteristic: environmental sample

text: United Kingdom

text: marine sediment

text: 54.06 -3.87972222

characteristic: lat lon

text: unidentified

text: unidentified


text: UNIVERSITY OF ESSEX

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Time5_CappedSIlverNanoparticles0.05_rep2

text: Cefas Endeavour

text: Yes

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: marine sediment

text: 54.06 -3.87972222

text: unidentified

text: unidentified


text: UNIVERSITY OF ESSEX

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Time5_CappedSIlverNanoparticles0.05_rep3

text: Cefas Endeavour

text: Yes

text: United Kingdom

text: marine sediment

text: 54.06 -3.87972222

text: unidentified

text: unidentified


text: Mus Musculus

characteristic: ArrayExpress-Species

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

characteristic: Submitter Id

text: house mouse

characteristic: common name

text: Mus musculus

characteristic: organism

text: Mus musculus


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

text: public

tag: Namespace:Sanger Institute

unit: day

characteristic: age

text: ArrayExpress

characteristic: broker name

text: naive T cell

characteristic: cell type

text: human

text: Protocols: T cells from blood (human) and mouse (spleen) Mononuclear cells were isolated from the cord blood of healthy neonates at Turku University Central Hospital using Ficoll-Paque PLUS (GE Healthcare, #17-1440-02). CD4+ T cells were then isolated using the Dynal bead-based positive isolation kit (Invitrogen). CD4+ cells from three individual donors were activated directly in 24w plates with plate-bound anti-CD3 (500ng/well, Immunotech) and soluble anti-CD28 (500 ng/mL, Immunotech) at a density of 2×106 cells/mL of Yssel’s medium67 containing 1% human AB serum (PAA). Th2 cell polarization was initiated with IL-4 (10 ng/ml, R&D Systems). Cells activated without IL-4 were also cultured (Th0). Total RNA was purified by Qiagen RNeasy Mini Kit according to manufacturer’s instruction, and concentration was determined by a Nanodrop. A total of 500 ng RNA was used to prepare sequencing libraries using KAPA Stranded mRNA-seq Kit (KAPA #07962193001) according to manufacturer’s instructions.

text: normal

characteristic: disease

text: donor pool 1

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: umbilical cord blood

characteristic: organism part

text: Homo sapiens

characteristic: title


characteristic: ENA-CHECKLIST

text: Sanger Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ArrayExpress

text: naive T cell

text: human

characteristic: description

text: normal

text: donor pool 2

text: Homo sapiens

text: Homo sapiens

text: umbilical cord blood

text: Homo sapiens


characteristic: ENA-FIRST-PUBLIC

text: Sanger Institute

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: naive T cell

text: human

text: normal

text: donor pool 3

text: Homo sapiens

text: Homo sapiens

text: umbilical cord blood

text: Homo sapiens


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

text: public

text: ArrayExpress

text: T-helper 0 cell

text: human

characteristic: common name

text: normal

text: donor pool 1

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: umbilical cord blood

text: Homo sapiens

text: anti-CD28 (500 nanogram per milliliter)

characteristic: stimulus


text: Sanger Institute

text: public

characteristic: age

text: ArrayExpress

characteristic: broker name

text: T-helper 0 cell

characteristic: cell type

text: human

text: normal

characteristic: disease

text: donor pool 2

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: umbilical cord blood

text: Homo sapiens

text: anti-CD28 (500 nanogram per milliliter)


characteristic: ENA-CHECKLIST

text: Sanger Institute

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ArrayExpress

text: T-helper 0 cell

text: human

text: normal

text: donor pool 3

text: Homo sapiens

text: Homo sapiens

text: umbilical cord blood

characteristic: organism part

text: Homo sapiens

text: anti-CD28 (500 nanogram per milliliter)

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: Sanger Institute

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ArrayExpress

text: T-helper 2 cell

text: human

characteristic: description

text: normal

text: donor pool 1

text: Homo sapiens

text: Homo sapiens

text: umbilical cord blood

text: Homo sapiens

text: anti-CD28 (500 nanogram per milliliter) and interleukin-4 (10 nanogram per milliliter)


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

text: public

characteristic: Submitter Id

text: ArrayExpress

text: T-helper 2 cell

text: human

characteristic: common name

text: normal

text: donor pool 2

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: umbilical cord blood

text: Homo sapiens


text: Sanger Institute

text: public

characteristic: age

text: ArrayExpress

characteristic: broker name

text: T-helper 2 cell

characteristic: cell type

text: human

text: normal

characteristic: disease

text: donor pool 3

text: Homo sapiens

text: Homo sapiens

text: umbilical cord blood

text: Homo sapiens

characteristic: stimulus


characteristic: ENA-CHECKLIST

text: Sanger Institute

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: 6 to 8

unit: week

text: ArrayExpress

text: naive T cell

text: house mouse

text: normal

text: wild type genotype

characteristic: genotype

text: donor pool 1

characteristic: individual

text: Mus musculus

text: Mus musculus

text: spleen

characteristic: organism part

text: Mus musculus

characteristic: strain


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Sanger Institute

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 6 to 8

text: ArrayExpress

text: naive T cell

text: house mouse

characteristic: description

text: normal

text: wild type genotype

text: donor pool 2

text: Mus musculus

text: Mus musculus

text: spleen

text: Mus musculus

characteristic: title


characteristic: External Id

text: Sanger Institute

text: public

characteristic: Submitter Id

text: 6 to 8

characteristic: age

text: ArrayExpress

characteristic: broker name

text: naive T cell

characteristic: cell type

text: house mouse

characteristic: common name

text: normal

text: wild type genotype

text: donor pool 3

text: Mus musculus

characteristic: organism

text: Mus musculus

text: spleen

text: Mus musculus


characteristic: ENA-CHECKLIST

text: Sanger Institute

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: 6 to 8

text: ArrayExpress

text: T-helper 0 cell

text: house mouse

text: Protocols: T cells from blood (human) and mouse (spleen) CD4+CD62L+ naive T cells were purified from spleens of wild-type C57BL/6JAX adult (6 - 8 weeks) mice using the CD4+CD62L+ T Cell Isolation Kit II (Miltenyii #130-093-227). Cell culture plates were coated with anti-CD3e antibody (1 ug/ml, eBioscences #16-0031-81) in 1X DPBS (Gibco) at 4°C overnight. Purified naive T cells were seeded at a concentration of 1 M cells/ml on the coated plates in IMDM (Gibco) with 10% heat-inactivated FBS (Sigma), supplied with 5 ug/ml anti-CD28 (eBioscience #16-0281-86) with (Th2) or without (Th0) 10 ng/ml mouse recombinant IL-4 (R&D Systems #404-ML-050). Cells were cultured in plates for up to 72 hours. Total RNA was purified by Qiagen RNeasy Mini Kit according to manufacturer’s instruction, and concentration was determined by a Nanodrop. A total of 500 ng RNA was used to prepare sequencing libraries using KAPA Stranded mRNA-seq Kit (KAPA #07962193001) according to manufacturer’s instructions.

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

characteristic: individual

text: Mus musculus

text: Mus musculus

text: spleen

text: Mus musculus

text: anti-CD28 (5 microgram per milliliter)

characteristic: stimulus


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Sanger Institute

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 6 to 8

text: ArrayExpress

text: T-helper 2 cell

text: house mouse

text: normal

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: spleen

characteristic: organism part

text: Mus musculus

text: anti-CD28 (5 microgram per milliliter) and interleukin-4 (10 nanogram per milliliter)

characteristic: strain


characteristic: External Id

text: UNIVERSITY OF ESSEX

text: public

characteristic: Submitter Id

text: Cefas Endeavour

characteristic: collected by

characteristic: collection date

text: archaea amoA amplicons from marine sediment communities exposed to silver nanoparticles

characteristic: description

text: Yes

characteristic: environmental sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: marine sediment

characteristic: isolation source

text: 54.06 -3.87972222

characteristic: lat lon

text: unidentified

text: unidentified

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF ESSEX

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Time5_uncappedSIlverNanoparticles0.05_rep1_archaea_amoA

text: Cefas Endeavour

text: Yes

text: United Kingdom

text: marine sediment

text: 54.06 -3.87972222

text: unidentified

characteristic: organism

text: unidentified


characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF ESSEX

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Time5_uncappedSIlverNanoparticles0.05_rep2_archaea_amoA

text: Cefas Endeavour

text: Yes

text: United Kingdom

text: marine sediment

text: 54.06 -3.87972222

text: unidentified

text: unidentified


characteristic: External Id

text: UNIVERSITY OF ESSEX

text: public

text: Time5_uncappedSIlverNanoparticles0.05_rep3_archaea_amoA

characteristic: Submitter Id

text: Cefas Endeavour

characteristic: collected by

text: Yes

text: United Kingdom

text: marine sediment

text: 54.06 -3.87972222

text: unidentified

text: unidentified


text: UNIVERSITY OF ESSEX

text: public

text: Time5_uncappedSIlverNanoparticles0.5_rep1_archaea_amoA

text: Cefas Endeavour

characteristic: collection date

characteristic: description

text: Yes

characteristic: environmental sample

text: United Kingdom

text: marine sediment

text: 54.06 -3.87972222

text: unidentified

text: unidentified


text: UNIVERSITY OF ESSEX

text: public

text: Time5_uncappedSIlverNanoparticles0.5_rep2_archaea_amoA

text: Cefas Endeavour

text: Yes

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: marine sediment

characteristic: isolation source

text: 54.06 -3.87972222

characteristic: lat lon

text: unidentified

text: unidentified


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF ESSEX

text: public

text: Time5_uncappedSIlverNanoparticles0.5_rep3_archaea_amoA

text: Cefas Endeavour

text: Yes

text: United Kingdom

text: marine sediment

text: 54.06 -3.87972222

text: unidentified

text: unidentified

characteristic: title


text: UNIVERSITY OF ESSEX

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Time5_CappedSIlverNanoparticles0.05_rep1_archaea_amoA

text: Cefas Endeavour

text: Yes

text: United Kingdom

text: marine sediment

text: 54.06 -3.87972222

text: unidentified

characteristic: organism

text: unidentified


characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF ESSEX

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Time5_CappedSIlverNanoparticles0.05_rep2_archaea_amoA

text: Cefas Endeavour

text: Yes

text: United Kingdom

text: marine sediment

text: 54.06 -3.87972222

text: unidentified

text: unidentified


characteristic: External Id

text: UNIVERSITY OF ESSEX

text: public

characteristic: SRA accession

text: Time5_CappedSIlverNanoparticles0.05_rep3_archaea_amoA

characteristic: Submitter Id

text: Cefas Endeavour

text: Yes

text: United Kingdom

text: marine sediment

text: 54.06 -3.87972222

text: unidentified

text: unidentified


text: UNIVERSITY OF ESSEX

text: public

text: Time5_CappedSIlverNanoparticles0.5_rep1_archaea_amoA

text: Cefas Endeavour

characteristic: collected by

characteristic: collection date

characteristic: description

text: Yes

text: United Kingdom

text: marine sediment

text: 54.06 -3.87972222

text: unidentified

text: unidentified


text: UNIVERSITY OF ESSEX

text: public

text: Time5_CappedSIlverNanoparticles0.5_rep2_archaea_amoA

text: Cefas Endeavour

text: Yes

characteristic: environmental sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: marine sediment

characteristic: isolation source

text: 54.06 -3.87972222

text: unidentified

text: unidentified


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF ESSEX

text: public

text: Time5_CappedSIlverNanoparticles0.5_rep3_archaea_amoA

text: Cefas Endeavour

text: Yes

text: United Kingdom

text: marine sediment

text: 54.06 -3.87972222

characteristic: lat lon

text: unidentified

text: unidentified


text: Mus musculus

characteristic: ArrayExpress-SPECIES

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: house mouse

characteristic: common name

text: Mus musculus

text: Mus musculus

characteristic: subject id

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:FIOCRUZ - PARANA - Instituto Carlos Chagas

unit: year

characteristic: age

text: ArrayExpress

characteristic: broker name

text: adipose tissue derived mesenchymal stem cell

characteristic: cell type

text: human

text: Protocols: All samples were isolated, collected after informed consent had been obtained, in accordance with guidelines for research involving human subjects, and with the approval of the Ethics Committee of Fundação Oswaldo Cruz, Brazil (approval number 1.308.195). hASCs were isolated of 100 ml of adipose tissue was washed with sterile phosphate-buffered saline (PBS) (Gibco Invitrogen). A one-step digestion by 1 mg/ml collagenase type I (Invitrogen) was performed for 30 min at 37 °C during permanent shaking and was followed by filtration through first a 100- and then 40-μm mesh filter (BD FALCON, BD Biosciences Discovery Labware, Bedford, MA, USA). The cell suspension was centrifuged at 800 g for 10 min, and contaminating erythrocytes were removed by erythrocyte lysis buffer, pH 7.3. The cells were washed and then cultivated at a density of 1 × 105 cells/cm2 in T75 culture flasks in DMEM-F12 (Gibco Invitrogen) supplemented with 10% FCS, penicillin (100 units/ml), and streptomycin (100 μg/ml). The medium was changed 2 days after the initial plating. The culture medium was then replaced twice each week. ASCs were subcultured after the cultures had reached 80% to 90% confluence; cells were detached by treatment with 0.25% trypsin/EDTA (Invitrogen) and were replated as passage-1 cells (the process was then continued). The characterization of the cells has been done following the minimal criteria for defining multipotent mesenchymal stromal cells as determined by the International Society for Cellular Therapy (Dominici et al., 2006). All tests were performed with cell cultures at passages 3 to 5. Polysomal, monosome and free fractions from adipose tissue stem cells cultures treated with differentiation medium for 24 hours were prepared according to (Spangenberg et al., 2013). In brief, cells were treated with 0.1 mg/mL cycloheximide (Sigma-Aldrich) for 10 min at 37oC, removed from the culture flasks with a cell scraper, and resuspended in 0.1 mg/mL cycloheximide in PBS. The suspension was centrifuged (2,000 g for 5 min), and the resulting pellet was washed twice with 0.1 mg/mL cycloheximide in PBS. The cells werelysed by incubation for 10 min on ice with polysome buffer (15mM Tris-HCl pH 7.4, 1% Triton X-100, 15mM MgCl2, 0.3M NaCl, 0.1 mg/mL cycloheximide), and the cell lysate was centrifuged at 12,000 g for 10 min at 4oC. The supernatant was carefully isolated, loaded onto 10% to 50% sucrose gradients, and centrifuged at 39,000 rpm (HIMAC CP80WX HITACHI) for 160 min at 4oC. The sucrose gradient was fractionated with the ISCO gradient fractionation system (ISCO Model 160 gradient former), connected to a UV detector to monitor the absorbance at 275 nm, and the polysome profile was recorded. The Total, free, monosome and polysomal RNA fractions were extracted by DirectZOL (Zymo Research). For adipogenic differentiation, hASCs were treated for 24 hours with hMSC Adipogenic Differentiation Bullet Kit (Lonza - PT-3004) and hMSC Osteogenic Bullet Kit (Lonza - PT-3002) , in accordance with the manufacturer's instructions. The RNA from total, free, monosome and polysome fractions was extracted using DirectZol kit (Zymo). Illumina® TruSeq® Stranded Total RNA Sample Preparation kits

text: normal

characteristic: disease

characteristic: individual

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: adipose tissue

characteristic: organism part

text: Homo sapiens

text: female

characteristic: sex


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: FIOCRUZ - PARANA - Instituto Carlos Chagas

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: ArrayExpress

text: human

characteristic: description

text: normal

text: Homo sapiens

text: Homo sapiens

text: adipose tissue

text: Homo sapiens

text: female


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CCMAR

characteristic: INSDC last update

text: public

text: Pelvetia canaliculata

text: Pelvetia canaliculata

text: pelvetiopsis evolution

characteristic: title


text: KTH

text: public

characteristic: INSDC status

characteristic: SRA accession

text: This sample is a virtual sample of co-assembled raw reads from multiple metagenome samples from the Baltic Sea. Co-assembly was performed using samples from a published time series (NCBI Sequence Read Archive accession numbers SRR2053273-SRR2053308) and from samples ERS2026637, ERS2026638, ERS2026633, ERS2026636, ERS2026635, ERS2026634, ERS2026565, ERS2026572, ERS2026571, ERS2026570, ERS2026569, ERS2026568, ERS2026567, ERS2026566, ERS2026558, ERS2026563, ERS2026562, ERS2026561, ERS2026560, ERS2026559, ERS2026555, ERS2026554, ERS2026553, ERS2026552, ERS2026551, ERS2026550, ERS2026556, ERS2026557, ERS2026534, ERS2026535, ERS2026536, ERS2026537, ERS2026538, ERS2026539, ERS2026540, ERS2026541, ERS2026542, ERS2026543, ERS2026544, ERS2026545, ERS2026546, ERS2026547, ERS2026548, ERS2026549.

text: Brackish water

characteristic: environment (biome)

text: water

characteristic: environment (material)

text: Yes

characteristic: environmental sample

text: Baltic Sea

characteristic: geographic location (country and/or sea)

text: metagenome

characteristic: investigation type

characteristic: member sample

text: in silico mixture

text: aquatic metagenome

text: aquatic metagenome

text: Virtual sample to link coassembly BARMVERSION1 its respective samples


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: FUNCTIONAL GENOMICS CENTER ZURICH

text: public

tag: Namespace:FUNCTIONAL GENOMICS CENTER ZURICH

text: Brown Adipocytes

characteristic: cell type

text: house mouse

characteristic: common name

text: BrownAdipocytes_ColdExposure Control Rep1

text: Mus musculus

characteristic: organism

text: Mus musculus


characteristic: ENA-LAST-UPDATE

text: FUNCTIONAL GENOMICS CENTER ZURICH

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Brown Adipocytes

text: house mouse

text: BrownAdipocytes_ColdExposure Control Rep2

characteristic: description

text: Mus musculus

text: Mus musculus


characteristic: External Id

text: FUNCTIONAL GENOMICS CENTER ZURICH

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Brown Adipocytes

text: house mouse

text: BrownAdipocytes_ColdExposure Control Rep3

text: Mus musculus

text: Mus musculus

characteristic: title


text: FUNCTIONAL GENOMICS CENTER ZURICH

text: public

text: Brown Adipocytes

text: house mouse

text: BrownAdipocytes_ColdExposure Control Rep4

text: Mus musculus

text: Mus musculus


text: FUNCTIONAL GENOMICS CENTER ZURICH

text: public

text: Brown Adipocytes

text: house mouse

text: BrownAdipocytes_ColdExposure Control Rep5

text: Mus musculus

text: Mus musculus


text: FUNCTIONAL GENOMICS CENTER ZURICH

text: public

text: Brown Adipocytes

text: house mouse

text: BrownAdipocytes_ColdExposure Control Rep6

text: Mus musculus

text: Mus musculus


text: FUNCTIONAL GENOMICS CENTER ZURICH

text: public

text: Brown Adipocytes

text: house mouse

text: BrownAdipocytes_ColdExposure PCE Rep1

text: Mus musculus

text: Mus musculus


text: FUNCTIONAL GENOMICS CENTER ZURICH

text: public

text: Brown Adipocytes

text: house mouse

text: BrownAdipocytes_ColdExposure PCE Rep2

text: Mus musculus

text: Mus musculus


text: FUNCTIONAL GENOMICS CENTER ZURICH

text: public

text: Brown Adipocytes

text: house mouse

text: BrownAdipocytes_ColdExposure PCE Rep3

text: Mus musculus

text: Mus musculus


text: FUNCTIONAL GENOMICS CENTER ZURICH

text: public

text: Brown Adipocytes

text: house mouse

text: BrownAdipocytes_ColdExposure PCE Rep4

text: Mus musculus

text: Mus musculus


text: FUNCTIONAL GENOMICS CENTER ZURICH

text: public

text: Brown Adipocytes

text: house mouse

text: BrownAdipocytes_ColdExposure PCE Rep5

text: Mus musculus

text: Mus musculus


text: FUNCTIONAL GENOMICS CENTER ZURICH

text: public

text: Brown Adipocytes

text: house mouse

text: BrownAdipocytes_ColdExposure PCE Rep6

text: Mus musculus

text: Mus musculus


text: FUNCTIONAL GENOMICS CENTER ZURICH

text: public

text: Brown Adipocytes

text: house mouse

text: BrownAdipocytes_RoomTemperature Control Rep1

text: Mus musculus

text: Mus musculus


text: FUNCTIONAL GENOMICS CENTER ZURICH

text: public

text: Brown Adipocytes

text: house mouse

text: BrownAdipocytes_RoomTemperature Control Rep2

text: Mus musculus

text: Mus musculus


text: FUNCTIONAL GENOMICS CENTER ZURICH

text: public

text: Brown Adipocytes

text: house mouse

text: BrownAdipocytes_RoomTemperature Control Rep3

text: Mus musculus

text: Mus musculus


text: FUNCTIONAL GENOMICS CENTER ZURICH

text: public

text: Brown Adipocytes

text: house mouse

text: BrownAdipocytes_RoomTemperature Control Rep4

text: Mus musculus

text: Mus musculus


text: FUNCTIONAL GENOMICS CENTER ZURICH

text: public

text: Brown Adipocytes

text: house mouse

text: BrownAdipocytes_RoomTemperature Control Rep5

text: Mus musculus

text: Mus musculus


text: FUNCTIONAL GENOMICS CENTER ZURICH

text: public

text: Brown Adipocytes

text: house mouse

text: BrownAdipocytes_RoomTemperature Control Rep6

text: Mus musculus

text: Mus musculus


text: FUNCTIONAL GENOMICS CENTER ZURICH

text: public

text: Brown Adipocytes

text: house mouse

text: BrownAdipocytes_RoomTemperature PCE Rep1

text: Mus musculus

text: Mus musculus


text: FUNCTIONAL GENOMICS CENTER ZURICH

text: public

text: Brown Adipocytes

text: house mouse

text: BrownAdipocytes_RoomTemperature PCE Rep2

text: Mus musculus

text: Mus musculus


text: FUNCTIONAL GENOMICS CENTER ZURICH

text: public

text: Brown Adipocytes

text: house mouse

text: BrownAdipocytes_RoomTemperature PCE Rep3

text: Mus musculus

text: Mus musculus


text: FUNCTIONAL GENOMICS CENTER ZURICH

text: public

text: Brown Adipocytes

text: house mouse

text: BrownAdipocytes_RoomTemperature PCE Rep4

text: Mus musculus

text: Mus musculus


text: FUNCTIONAL GENOMICS CENTER ZURICH

text: public

text: Brown Adipocytes

text: house mouse

text: BrownAdipocytes_RoomTemperature PCE Rep5

text: Mus musculus

text: Mus musculus


text: FUNCTIONAL GENOMICS CENTER ZURICH

text: public

text: Brown Adipocytes

text: house mouse

text: BrownAdipocytes_RoomTemperature PCE Rep6

text: Mus musculus

text: Mus musculus


text: DTU-GE

text: public

text: DTU2017-671-PRJ1109-Salmonella-Derby-2011-60-1443-1_S40_L001

text: DTU-GE

characteristic: broker name

text: DTU

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Denmark

characteristic: geo loc name

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Food

characteristic: isolation source non-host-associated

text: Salmonella enterica

text: Salmonella enterica

text: Derby

characteristic: serovar

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: DTU2017-676-PRJ1109-Salmonella-Derby-2012-60-358-3_S45_L001

characteristic: Submitter Id

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Denmark

text: No

text: Food

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Derby


text: DTU-GE

text: public

characteristic: INSDC status

characteristic: SRA accession

text: DTU2017-696-PRJ1109-Salmonella-Derby-F15-681-6_S29_L001

text: DTU-GE

characteristic: broker name

text: DTU

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Denmark

characteristic: geo loc name

text: Denmark

characteristic: geographic location (country and/or sea)

text: No

text: Food

text: Salmonella enterica

text: Salmonella enterica

text: Derby


characteristic: ENA-CHECKLIST

text: DTU-GE

text: public

text: DTU2017-698-PRJ1109-Salmonella-Derby-F16-233-1_S31_L001

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Denmark

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Food

characteristic: isolation source non-host-associated

text: Salmonella enterica

text: Salmonella enterica

text: Derby

characteristic: serovar

characteristic: strain


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: DTU2017-701-PRJ1109-Salmonella-Derby-F16-865-1_S33_L001

characteristic: Submitter Id

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Denmark

text: No

text: Other

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Derby


text: DTU-GE

text: public

characteristic: INSDC status

characteristic: SRA accession

text: DTU2017-702-PRJ1109-Salmonella-Derby-F16-755-1_S35_L001

text: DTU-GE

characteristic: broker name

text: DTU

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Denmark

characteristic: geo loc name

text: Denmark

characteristic: geographic location (country and/or sea)

text: No

text: Other

text: Salmonella enterica

text: Salmonella enterica

text: Derby


characteristic: ENA-CHECKLIST

text: DTU-GE

text: public

text: DTU2017-699-PRJ1109-Salmonella-Derby-F16-264-2_S32_L001

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Denmark

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Food

characteristic: isolation source non-host-associated

text: Salmonella enterica

text: Salmonella enterica

text: Derby

characteristic: serovar

characteristic: strain


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: DTU2017-694-PRJ1109-Salmonella-Derby-F15-174-1_S27_L001

characteristic: Submitter Id

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Denmark

text: No

text: Food

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Derby


text: DTU-GE

text: public

characteristic: INSDC status

characteristic: SRA accession

text: DTU2017-648-PRJ1109-Salmonella-Derby-2007-60-619-2_S17_L001

text: DTU-GE

characteristic: broker name

text: DTU

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Denmark

characteristic: geo loc name

text: Denmark

characteristic: geographic location (country and/or sea)

text: No

text: Food

text: Salmonella enterica

text: Salmonella enterica

text: Derby


characteristic: ENA-CHECKLIST

text: DTU-GE

text: public

text: DTU2017-700-PRJ1109-Salmonella-Derby-F16-830-1_S34_L001

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Denmark

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Other

characteristic: isolation source non-host-associated

text: Salmonella enterica

text: Salmonella enterica

text: Derby

characteristic: serovar

characteristic: strain


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: DTU2017-695-PRJ1109-Salmonella-Derby-F15-271-1_S28_L001

characteristic: Submitter Id

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Denmark

text: No

text: Food

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Derby


text: DTU-GE

text: public

characteristic: INSDC status

characteristic: SRA accession

text: DTU2017-680-PRJ1109-Salmonella-Derby-2012-60-2003-1_S13_L001

text: DTU-GE

characteristic: broker name

text: DTU

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Denmark

characteristic: geo loc name

text: Denmark

characteristic: geographic location (country and/or sea)

text: No

text: Animal

text: Salmonella enterica

text: Salmonella enterica

text: Derby


characteristic: ENA-CHECKLIST

text: DTU-GE

text: public

text: DTU2017-691-PRJ1109-Salmonella-Derby-F14-1554-1_S24_L001

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Denmark

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Animal

characteristic: isolation source non-host-associated

text: Salmonella enterica

text: Salmonella enterica

text: Derby

characteristic: serovar

characteristic: strain


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: DTU2017-693-PRJ1109-Salmonella-Derby-F15-137-1_S26_L001

characteristic: Submitter Id

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Denmark

text: No

text: Animal

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Derby


text: DTU-GE

text: public

characteristic: INSDC status

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text: DTU2017-697-PRJ1109-Salmonella-Derby-F15-993-1_S30_L001

text: DTU-GE

characteristic: broker name

text: DTU

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Denmark

characteristic: geo loc name

text: Denmark

characteristic: geographic location (country and/or sea)

text: No

text: Food

text: Salmonella enterica

text: Salmonella enterica

text: Derby


characteristic: ENA-CHECKLIST

text: DTU-GE

text: public

text: DTU2017-666-PRJ1109-Salmonella-Derby-2010-10-129-13_S35_L001

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Denmark

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Other

characteristic: isolation source non-host-associated

text: Salmonella enterica

text: Salmonella enterica

text: Derby

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characteristic: ENA-FIRST-PUBLIC

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characteristic: External Id

text: DTU-GE

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text: public

text: DTU2017-685-PRJ1109-Salmonella-Derby-2013-60-1921-1_S18_L001

characteristic: Submitter Id

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Denmark

text: No

text: Animal

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Derby


text: DTU-GE

text: public

characteristic: INSDC status

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text: DTU2017-690-PRJ1109-Salmonella-Derby-F14-540-1_S23_L001

text: DTU-GE

characteristic: broker name

text: DTU

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Denmark

characteristic: geo loc name

text: Denmark

characteristic: geographic location (country and/or sea)

text: No

text: Food

text: Salmonella enterica

text: Salmonella enterica

text: Derby


characteristic: ENA-CHECKLIST

text: DTU-GE

text: public

text: DTU2017-684-PRJ1109-Salmonella-Derby-2013-60-1244-1_S17_L001

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Denmark

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Animal

characteristic: isolation source non-host-associated

text: Salmonella enterica

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text: DTU-GE

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text: public

text: DTU2017-681-PRJ1109-Salmonella-Derby-2013-60-953-1_S14_L001

characteristic: Submitter Id

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Denmark

text: No

text: Food

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Derby


text: DTU-GE

text: public

characteristic: INSDC status

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text: DTU2017-649-PRJ1109-Salmonella-Derby-2007-60-714-1_S18_L001

text: DTU-GE

characteristic: broker name

text: DTU

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Denmark

characteristic: geo loc name

text: Denmark

characteristic: geographic location (country and/or sea)

text: No

text: Animal

text: Salmonella enterica

text: Salmonella enterica

text: Derby


characteristic: ENA-CHECKLIST

text: DTU-GE

text: public

text: DTU2017-679-PRJ1109-Salmonella-Derby-2012-60-818-1_S48_L001

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Denmark

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Food

characteristic: isolation source non-host-associated

text: Salmonella enterica

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text: DTU-GE

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text: public

text: DTU2017-687-PRJ1109-Salmonella-Derby-F14-748-1_S20_L001

characteristic: Submitter Id

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Denmark

text: No

text: Other

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Derby


text: DTU-GE

text: public

characteristic: INSDC status

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text: DTU2017-660-PRJ1109-Salmonella-Derby-2009-60-790-4_S29_L001

text: DTU-GE

characteristic: broker name

text: DTU

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Denmark

characteristic: geo loc name

text: Denmark

characteristic: geographic location (country and/or sea)

text: No

text: Food

text: Salmonella enterica

text: Salmonella enterica

text: Derby


characteristic: ENA-CHECKLIST

text: DTU-GE

text: public

text: DTU2017-689-PRJ1109-Salmonella-Derby-F14-928-1_S22_L001

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Denmark

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Food

characteristic: isolation source non-host-associated

text: Salmonella enterica

text: Salmonella enterica

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text: DTU-GE

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text: public

text: DTU2017-652-PRJ1109-Salmonella-Derby-2007-60-3704-1_S21_L001

characteristic: Submitter Id

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Denmark

text: No

text: Animal

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Derby


text: DTU-GE

text: public

characteristic: INSDC status

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text: DTU2017-667-PRJ1109-Salmonella-Derby-2010-60-661-9_S36_L001

text: DTU-GE

characteristic: broker name

text: DTU

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Denmark

characteristic: geo loc name

text: Denmark

characteristic: geographic location (country and/or sea)

text: No

text: Food

text: Salmonella enterica

text: Salmonella enterica

text: Derby


characteristic: ENA-CHECKLIST

text: DTU-GE

text: public

text: DTU2017-655-PRJ1109-Salmonella-Derby-2008-60-1346-1_S24_L001

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Denmark

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Animal

characteristic: isolation source non-host-associated

text: Salmonella enterica

text: Salmonella enterica

text: Derby

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text: DTU-GE

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text: public

text: DTU2017-692-PRJ1109-Salmonella-Derby-F15-117-1_S25_L001

characteristic: Submitter Id

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Denmark

text: No

text: Other

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Derby


text: DTU-GE

text: public

characteristic: INSDC status

characteristic: SRA accession

text: DTU2017-688-PRJ1109-Salmonella-Derby-F14-901-1_S21_L001

text: DTU-GE

characteristic: broker name

text: DTU

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Denmark

characteristic: geo loc name

text: Denmark

characteristic: geographic location (country and/or sea)

text: No

text: Food

text: Salmonella enterica

text: Salmonella enterica

text: Derby


characteristic: ENA-CHECKLIST

text: DTU-GE

text: public

text: DTU2017-717-PRJFJBE-Salmonella-Derby-F17-27-1_S1_L001

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Denmark

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Other

characteristic: isolation source non-host-associated

text: Salmonella enterica

text: Salmonella enterica

text: Derby

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characteristic: ENA-FIRST-PUBLIC

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text: DTU-GE

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text: public

text: DTU2017-677-PRJ1109-Salmonella-Derby-2012-60-387-1_S46_L001

characteristic: Submitter Id

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Denmark

text: No

text: Food

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Derby


text: DTU-GE

text: public

characteristic: INSDC status

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text: DTU2017-682-PRJ1109-Salmonella-Derby-2013-60-957-1_S15_L001

text: DTU-GE

characteristic: broker name

text: DTU

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Denmark

characteristic: geo loc name

text: Denmark

characteristic: geographic location (country and/or sea)

text: No

text: Food

text: Salmonella enterica

text: Salmonella enterica

text: Derby


characteristic: ENA-CHECKLIST

text: DTU-GE

text: public

text: DTU2017-663-PRJ1109-Salmonella-Derby-2009-60-1555-4_S32_L001

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Denmark

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Food

characteristic: isolation source non-host-associated

text: Salmonella enterica

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text: DTU-GE

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text: public

text: DTU2017-678-PRJ1109-Salmonella-Derby-2012-60-427-1_S47_L001

characteristic: Submitter Id

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Denmark

text: No

text: Food

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Derby


text: DTU-GE

text: public

characteristic: INSDC status

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text: DTU2017-654-PRJ1109-Salmonella-Derby-2008-60-1282-5_S23_L001

text: DTU-GE

characteristic: broker name

text: DTU

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Denmark

characteristic: geo loc name

text: Denmark

characteristic: geographic location (country and/or sea)

text: No

text: Food

text: Salmonella enterica

text: Salmonella enterica

text: Derby


characteristic: ENA-CHECKLIST

text: DTU-GE

text: public

text: DTU2017-658-PRJ1109-Salmonella-Derby-2008-60-1279-1_S27_L001

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Denmark

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Food

characteristic: isolation source non-host-associated

text: Salmonella enterica

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text: DTU-GE

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text: public

text: DTU2017-686-PRJ1109-Salmonella-Derby-F14-132-1_S19_L001

characteristic: Submitter Id

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Denmark

text: No

text: Food

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Derby


text: DTU-GE

text: public

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text: DTU2017-670-PRJ1109-Salmonella-Derby-2011-60-645-1_S39_L001

text: DTU-GE

characteristic: broker name

text: DTU

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Denmark

characteristic: geo loc name

text: Denmark

characteristic: geographic location (country and/or sea)

text: No

text: Other

text: Salmonella enterica

text: Salmonella enterica

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characteristic: ENA-CHECKLIST

text: DTU-GE

text: public

text: DTU2017-661-PRJ1109-Salmonella-Derby-2009-60-2685-1_S30_L001

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Denmark

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Food

characteristic: isolation source non-host-associated

text: Salmonella enterica

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text: DTU-GE

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text: public

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characteristic: Submitter Id

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Denmark

text: No

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text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Derby


text: DTU-GE

text: public

characteristic: INSDC status

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text: DTU2017-683-PRJ1109-Salmonella-Derby-2013-60-1036-1_S16_L001

text: DTU-GE

characteristic: broker name

text: DTU

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Denmark

characteristic: geo loc name

text: Denmark

characteristic: geographic location (country and/or sea)

text: No

text: Food

text: Salmonella enterica

text: Salmonella enterica

text: Derby


characteristic: ENA-CHECKLIST

text: DTU-GE

text: public

text: DTU2017-651-PRJ1109-Salmonella-Derby-2007-60-825-3_S20_L001

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Denmark

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Food

characteristic: isolation source non-host-associated

text: Salmonella enterica

text: Salmonella enterica

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characteristic: ENA-FIRST-PUBLIC

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text: DTU-GE

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text: public

text: DTU2017-653-PRJ1109-Salmonella-Derby-2007-60-3661-2_S22_L001

characteristic: Submitter Id

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Denmark

text: No

text: Food

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Derby


text: DTU-GE

text: public

characteristic: INSDC status

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text: DTU2017-659-PRJ1109-Salmonella-Derby-2009-60-324-1_S28_L001

text: DTU-GE

characteristic: broker name

text: DTU

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Denmark

characteristic: geo loc name

text: Denmark

characteristic: geographic location (country and/or sea)

text: No

text: Animal

text: Salmonella enterica

text: Salmonella enterica

text: Derby


characteristic: ENA-CHECKLIST

text: DTU-GE

text: public

text: DTU2017-664-PRJ1109-Salmonella-Derby-2010-60-39-1_S33_L001

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Denmark

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Animal

characteristic: isolation source non-host-associated

text: Salmonella enterica

text: Salmonella enterica

text: Derby

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characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: DTU2017-675-PRJ1109-Salmonella-Derby-2011-60-2903-4_S44_L001

characteristic: Submitter Id

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Denmark

text: No

text: Other

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Derby


text: DTU-GE

text: public

characteristic: INSDC status

characteristic: SRA accession

text: DTU2017-665-PRJ1109-Salmonella-Derby-2010-51-918-1_S34_L001

text: DTU-GE

characteristic: broker name

text: DTU

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Denmark

characteristic: geo loc name

text: Denmark

characteristic: geographic location (country and/or sea)

text: No

text: Food

text: Salmonella enterica

text: Salmonella enterica

text: Derby


characteristic: ENA-CHECKLIST

text: DTU-GE

text: public

text: DTU2017-650-PRJ1109-Salmonella-Derby-2007-60-594-1_S19_L001

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Denmark

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Food

characteristic: isolation source non-host-associated

text: Salmonella enterica

text: Salmonella enterica

text: Derby

characteristic: serovar

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characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: DTU2017-657-PRJ1109-Salmonella-Derby-2008-60-2940-6_S26_L001

characteristic: Submitter Id

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Denmark

text: No

text: Food

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Derby


text: DTU-GE

text: public

characteristic: INSDC status

characteristic: SRA accession

text: DTU2017-656-PRJ1109-Salmonella-Derby-2008-60-2070-1_S25_L001

text: DTU-GE

characteristic: broker name

text: DTU

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Denmark

characteristic: geo loc name

text: Denmark

characteristic: geographic location (country and/or sea)

text: No

text: Food

text: Salmonella enterica

text: Salmonella enterica

text: Derby


characteristic: ENA-CHECKLIST

text: DTU-GE

text: public

text: DTU2017-669-PRJ1109-Salmonella-Derby-2010-60-6114-1_S38_L001

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Denmark

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Other

characteristic: isolation source non-host-associated

text: Salmonella enterica

text: Salmonella enterica

text: Derby

characteristic: serovar

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characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: DTU2017-674-PRJ1109-Salmonella-Derby-2011-60-3293-1_S43_L001

characteristic: Submitter Id

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Denmark

text: No

text: Food

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Derby


text: DTU-GE

text: public

characteristic: INSDC status

characteristic: SRA accession

text: DTU2017-662-PRJ1109-Salmonella-Derby-2009-60-2236-2_S31_L001

text: DTU-GE

characteristic: broker name

text: DTU

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Denmark

characteristic: geo loc name

text: Denmark

characteristic: geographic location (country and/or sea)

text: No

text: Animal

text: Salmonella enterica

text: Salmonella enterica

text: Derby


characteristic: ENA-CHECKLIST

text: DTU-GE

text: public

text: DTU2017-673-PRJ1109-Salmonella-Derby-2011-60-2467-3_S42_L001

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Denmark

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Food

characteristic: isolation source non-host-associated

text: Salmonella enterica

text: Salmonella enterica

text: Derby

characteristic: serovar

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characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: DTU2017-668-PRJ1109-Salmonella-Derby-2010-60-855-1_S37_L001

characteristic: Submitter Id

text: DTU-GE

text: DTU

text: No

text: Denmark

text: Denmark

text: No

text: Animal

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Derby