HCC-Rat 9-liver

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: CANCER RESEARCH UK CAMBRIDGE INSTITUTE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: HCC-Rat 9-liver

text: Norway rat

text: liver sample HCC-Rat 9 from individual HCC-Rat 9. This sample is a unique specimen from this individual.

text: HCC-Rat 9

characteristic: individual name

text: Rattus norvegicus

characteristic: organism

text: HCC-Rat 9

characteristic: sample name

text: Rattus norvegicus

text: male

characteristic: sex

text: liver

text: not treated

characteristic: treatment agent


92757 N1-liver

status: PUBLIC

tag: attribute

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CANCER RESEARCH UK CAMBRIDGE INSTITUTE

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 92757 N1-liver

tag: Namespace:CANCER RESEARCH UK CAMBRIDGE INSTITUTE

characteristic: Submitter Id

text: house mouse

characteristic: common name

characteristic: date of birth

characteristic: date of death

text: liver sample 92757 N1 from individual 92757. This sample is a unique specimen from this individual.

characteristic: description

text: Mus musculus

text: 92757 N1

text: Mus musculus

text: male

characteristic: strain

text: liver

characteristic: tissue type

characteristic: title

text: not treated


96029 N2-liver

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: CANCER RESEARCH UK CAMBRIDGE INSTITUTE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: 96029 N2-liver

text: house mouse

text: liver sample 96029 N2 from individual 96029. This sample is a unique specimen from this individual.

characteristic: individual name

text: Mus musculus

characteristic: organism

text: 96029 N2

text: Mus musculus

text: male

text: liver

text: not treated


HCC-Rat 8-liver

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CANCER RESEARCH UK CAMBRIDGE INSTITUTE

characteristic: INSDC last update

text: public

text: HCC-Rat 8-liver

text: Norway rat

text: liver sample HCC-Rat 8 from individual HCC-Rat 8. This sample is a unique specimen from this individual.

text: HCC-Rat 8

text: Rattus norvegicus

text: HCC-Rat 8

characteristic: sample name

text: Rattus norvegicus

text: male

characteristic: sex

text: liver

text: not treated

characteristic: treatment agent


87919 N1-liver

text: CANCER RESEARCH UK CAMBRIDGE INSTITUTE

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 87919 N1-liver

characteristic: Submitter Id

text: house mouse

characteristic: common name

characteristic: date of birth

characteristic: date of death

text: liver sample 87919 N1 from individual 87919. This sample is a unique specimen from this individual.

text: Mus musculus

text: 87919 N1

text: Mus musculus

text: male

text: liver

text: not treated


91432 N1-liver

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: CANCER RESEARCH UK CAMBRIDGE INSTITUTE

text: public

text: 91432 N1-liver

text: southeastern Asian house mouse

text: liver dysplastic nodule 91432 N1 from DEN treated individual 91432. This sample is a unique specimen from this individual.

characteristic: description

text: dysplastic nodule

characteristic: diagnosis

text: Mus musculus castaneus

text: 91432 N1

text: Mus musculus castaneus

text: male

text: CAST/EiJ

characteristic: strain

text: liver

characteristic: tissue type

characteristic: title

text: DEN

characteristic: treatment date

unit: ug/g body weight

characteristic: treatment dose

text: high

characteristic: tumour grading


87922 N1-liver

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CANCER RESEARCH UK CAMBRIDGE INSTITUTE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: 87922 N1-liver

text: house mouse

text: liver sample 87922 N1 from individual 87922. This sample is a unique specimen from this individual.

characteristic: individual name

text: Mus musculus

characteristic: organism

text: 87922 N1

characteristic: sample name

text: Mus musculus

text: male

characteristic: sex

text: liver

text: not treated

characteristic: treatment agent


HCC-Rat 1-liver

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: CANCER RESEARCH UK CAMBRIDGE INSTITUTE

text: public

characteristic: INSDC status

characteristic: SRA accession

text: HCC-Rat 1-liver

characteristic: Submitter Id

text: Norway rat

characteristic: common name

text: liver sample HCC-Rat 1 from individual HCC-Rat 1. This sample is a unique specimen from this individual.

characteristic: description

text: HCC-Rat 1

text: Rattus norvegicus

text: HCC-Rat 1

text: Rattus norvegicus

text: male

text: liver

text: not treated


87920 N2-liver

characteristic: ENA-LAST-UPDATE

text: CANCER RESEARCH UK CAMBRIDGE INSTITUTE

text: public

text: 87920 N2-liver

text: house mouse

characteristic: date of birth

characteristic: date of death

text: liver sample 87920 N2 from individual 87920. This sample is a unique specimen from this individual.

text: Mus musculus

text: 87920 N2

text: Mus musculus

text: male

characteristic: strain

text: liver

characteristic: tissue type

characteristic: title

text: not treated


85037 N3-liver

characteristic: External Id

text: CANCER RESEARCH UK CAMBRIDGE INSTITUTE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: 85037 N3-liver

text: house mouse

text: liver sample 85037 N3 from individual 85037. This sample is a unique specimen from this individual.

characteristic: individual name

text: Mus musculus

characteristic: organism

text: 85037 N3

text: Mus musculus

text: male

text: liver

text: not treated


HCC-Rat 10-liver

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: CANCER RESEARCH UK CAMBRIDGE INSTITUTE

text: public

characteristic: INSDC status

text: HCC-Rat 10-liver

text: Norway rat

text: liver sample HCC-Rat 10 from individual HCC-Rat 10. This sample is a unique specimen from this individual.

text: HCC-Rat 10

text: Rattus norvegicus

text: HCC-Rat 10

characteristic: sample name

text: Rattus norvegicus

text: male

characteristic: sex

text: liver

text: not treated

characteristic: treatment agent


91376 N2-liver

characteristic: ENA-LAST-UPDATE

text: CANCER RESEARCH UK CAMBRIDGE INSTITUTE

text: public

characteristic: SRA accession

text: 91376 N2-liver

characteristic: Submitter Id

text: southeastern Asian house mouse

characteristic: common name

characteristic: date of birth

text: liver dysplastic nodule 91376 N2 from DEN treated individual 91376. This sample is a unique specimen from this individual.

characteristic: description

text: dysplastic nodule

characteristic: diagnosis

text: Mus musculus castaneus

text: 91376 N2

text: Mus musculus castaneus

text: male

text: CAST/EiJ

text: liver

text: DEN

characteristic: treatment date

characteristic: treatment dose


85037 N1-liver

characteristic: External Id

text: CANCER RESEARCH UK CAMBRIDGE INSTITUTE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: 85037 N1-liver

text: house mouse

characteristic: date of death

text: liver sample 85037 N1 from individual 85037. This sample is a unique specimen from this individual.

characteristic: individual name

text: Mus musculus

text: 85037 N1

text: Mus musculus

text: male

characteristic: strain

text: liver

characteristic: tissue type

characteristic: title

text: not treated


87920 N3-liver

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CANCER RESEARCH UK CAMBRIDGE INSTITUTE

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 87920 N3-liver

text: house mouse

text: liver sample 87920 N3 from individual 87920. This sample is a unique specimen from this individual.

text: Mus musculus

characteristic: organism

text: 87920 N3

characteristic: sample name

text: Mus musculus

text: male

characteristic: sex

text: liver

text: not treated

characteristic: treatment agent


characteristic: External Id

text: NETHERLANDS INSTITUTE OF ECOLOGY

characteristic: INSDC center name

text: public

tag: Namespace:NETHERLANDS INSTITUTE OF ECOLOGY

characteristic: Submitter Id

characteristic: collection date

text: rhizosphere

characteristic: environment (biome)

text: field

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Netherlands

characteristic: geographic location (country and/or sea)

unit: m

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: soil metagenome

characteristic: project name

text: soil metagenome

text: Ion Torrent

characteristic: sequencing method

text: soil

characteristic: soil environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:ROSLIN INSTITUTE, UNIVERSITY OF EDINBURGH

text: Kerry Blue Terrier

characteristic: breed

text: dog

characteristic: common name

text: gDNA from whole blood/EDTA

characteristic: description

text: Caution: breed identity is owner reported.

characteristic: notes

text: Canis lupus familiaris

characteristic: organism

text: Canis lupus familiaris

text: F

characteristic: sex

text: Variant discovery of retrognathic and non-retrognathic dog breeds

characteristic: title


characteristic: External Id

text: ROSLIN INSTITUTE, UNIVERSITY OF EDINBURGH

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: Pug

text: dog

text: gDNA from whole blood/EDTA

text: Canis lupus familiaris

text: Canis lupus familiaris

text: M


characteristic: ENA-CHECKLIST

text: public

text: Pug

text: dog

text: gDNA from whole blood/EDTA

text: Canis lupus familiaris

text: Canis lupus familiaris

text: F


text: gut metagenome

characteristic: ArrayExpress-SPECIES

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: gut metagenome

text: gut metagenome

text: gut metagenome

characteristic: subject id


characteristic: ENA-LAST-UPDATE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Pug

text: dog

text: gDNA from soft tissue

text: Canis lupus familiaris

text: Canis lupus familiaris

text: M


text: public

characteristic: INSDC status

characteristic: SRA accession

text: Saluki

characteristic: breed

text: dog

text: gDNA from whole blood/EDTA

text: Canis lupus familiaris

text: Canis lupus familiaris

text: M


text: public

text: Shih Tzu

text: dog

characteristic: common name

text: gDNA from whole blood/EDTA

characteristic: description

characteristic: notes

text: Canis lupus familiaris

text: Canis lupus familiaris

text: F


text: public

text: Whippet

text: dog

text: gDNA from whole blood/EDTA

text: Canis lupus familiaris

characteristic: organism

text: Canis lupus familiaris

text: M

characteristic: sex

characteristic: title


text: Canis lupus familiaris

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris


text: Mouse

characteristic: ArrayExpress-PHENOTYPE

text: Homo sapiens

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: human

text: Homo sapiens

text: Mouse

characteristic: phenotype

text: Homo sapiens


characteristic: ENA-LAST-UPDATE

text: EAWAG

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: collection date

text: Cyanobacteria

text: Peri-alpine lake sedimentary DNA

text: Temperate

characteristic: environment (biome)

text: Lake

characteristic: environment (feature)

text: Sediment

characteristic: environment (material)

text: Switzerland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: Cyanobacteria bacterium JGI 0000014-E08

text: Homogenization of lake cyanobacterial communities over a century of climate change and eutrophication

characteristic: project name

text: Cyanobacteria bacterium JGI 0000014-E08

text: sediment

characteristic: sediment environmental package

characteristic: sequencing method

text: Sedimentary DNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EAWAG

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Cyanobacteria

characteristic: common name

text: Peri-alpine lake sedimentary DNA

characteristic: description

text: Temperate

text: Lake

text: Sediment

text: Italy

text: metagenome

text: Cyanobacteria bacterium JGI 0000014-E08

characteristic: organism

text: Cyanobacteria bacterium JGI 0000014-E08

text: sediment

text: Sedimentary DNA

characteristic: title


text: EAWAG

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: collection date

text: Cyanobacteria

text: Peri-alpine lake sedimentary DNA

text: Temperate

characteristic: environment (biome)

text: Lake

characteristic: environment (feature)

text: Sediment

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

text: metagenome

text: Cyanobacteria bacterium JGI 0000014-E08

text: Cyanobacteria bacterium JGI 0000014-E08

text: sediment

text: Sedimentary DNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GLASGOW

characteristic: INSDC center name

text: public

characteristic: SRA accession

tag: Namespace:UNIVERSITY OF GLASGOW

text: fruit fly

text: Drosophila melanogaster

text: Drosophila melanogaster

text: Female

characteristic: sex

text: Female Brain

characteristic: tissue lib

text: Brain

characteristic: tissue type


text: UNIVERSITY OF GLASGOW

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: fruit fly

characteristic: common name

text: Drosophila melanogaster

characteristic: organism

text: Drosophila melanogaster

text: Male

text: Male Accessory Glands

text: Accessory Glands

characteristic: title


text: UNIVERSITY OF GLASGOW

text: public

text: fruit fly

text: Drosophila melanogaster

text: Drosophila melanogaster

text: Male

text: Male Anal Pad

text: Anal Pad


text: UNIVERSITY OF GLASGOW

text: public

text: fruit fly

text: Drosophila melanogaster

text: Drosophila melanogaster

text: Female

text: Female Anal Pad

text: Anal Pad


text: CBMSO

text: public

text: Leishmania donovani

text: Leishmania donovani

text: Leishmania donovani HU3 de novo assembly and annotation.


text: INRA

text: public

text: Comparative genomics of Tenacibaculum dicentrarchi and “Tenacibaculum finnmarkense” highlights intricate evolution of fish-pathogenic species

characteristic: description

text: Tenacibaculum dicentrarchi

text: Tenacibaculum dicentrarchi

characteristic: strain

text: Draft genome of TdChD05 isolate of of T. dicentrarchi


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: INRA

text: public

text: Tenacibaculum dicentrarchi

text: Tenacibaculum dicentrarchi

text: Draft genome of Tenacibaculum dicentrarchi type strain


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA

text: public

text: Tenacibaculum dicentrarchi

text: Tenacibaculum dicentrarchi

text: Draft genome sequence of Tenacibaculum dicentrarchi strain TNO021


text: INRA

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: Tenacibaculum finnmarkense

text: Tenacibaculum finnmarkense

text: TFHFJT

text: Draft genome sequence of Tenacibaculum finnmarkense type strain TFHFJT


text: INRA

text: public

text: Tenacibaculum finnmarkense

text: Tenacibaculum finnmarkense

text: Draft genome sequence of Tenacibaculum finnmarkense strain TNO006


text: INRA

text: public

text: Tenacibaculum finnmarkense

text: Tenacibaculum finnmarkense

text: Draft genome sequence of Tenacibaculum finnmarkense strain TNO010


text: Mus musculus

characteristic: ArrayExpress-SPECIES

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

characteristic: subject id

text: EBset1 d2 clone 37


text: Mus musculus

text: SC

characteristic: INSDC first public

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: EBset1 d2 clone 43


text: Mus musculus

text: SC

characteristic: INSDC last update

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: EBset1 d2 clone 48


text: Mus musculus

text: SC

text: public

characteristic: INSDC status

text: house mouse

text: Mus musculus

text: Mus musculus

text: EBset1 d2 clone 58


text: Mus musculus

text: SC

text: public

characteristic: Submitter Id

text: house mouse

text: Mus musculus

text: Mus musculus

text: EB set1 d4 clone 37


text: Mus musculus

text: SC

text: public

text: house mouse

characteristic: common name

text: Mus musculus

text: Mus musculus

text: EBset1 d4 clone 43


text: Mus musculus

text: SC

text: public

text: house mouse

text: Mus musculus

characteristic: organism

text: Mus musculus

text: EBset1 d4 clone 48


text: Mus musculus

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: EBset1 d4 clone 58

characteristic: title


text: Mus musculus

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: EBset1 d9 clone 37


text: Mus musculus

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: EBset1 d9 clone 43


text: Mus musculus

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: EBset1 d9 clone 48


text: Mus musculus

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: EBset1 d9 clone 58


text: Mus musculus

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: EBset3 d2 clone 37


text: Mus musculus

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: EBset3 d2 clone 43


text: Mus musculus

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: EBset3 d2 clone 48


text: Mus musculus

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: EBset3 d2 clone 58


text: Mus musculus

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: EB set3 d4 clone 37


text: Mus musculus

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: EBset3 d4 clone 43


text: Mus musculus

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: EBset3 d4 clone 48


text: Mus musculus

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: EBset3 d4 clone 58


text: Mus musculus

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: EBset3 d9 clone 37


text: Mus musculus

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: EBset3 d9 clone 43


text: Mus musculus

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: EBset3 d9 clone 48


text: Mus musculus

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: EBset3 d9 clone 58


text: EMBL

text: public

text: Escherichia coli

text: Escherichia coli

type: has member


Azucena

text: JIC

text: public

text: Azucena

text: rice

text: Oryza sativa

text: Oryza sativa

text: Genetic diversity of resistance genes in rice cultivars from China and other parts of the world using RenSeq Technology


text: JIC

text: public

text: rice

text: Oryza sativa

text: Oryza sativa


Kasalath

text: JIC

text: public

text: Kasalath

text: rice

text: Oryza sativa

text: Oryza sativa


Kitaake

text: JIC

text: public

text: Kitaake

text: rice

text: Oryza sativa

text: Oryza sativa


Maratelli

text: JIC

text: public

text: Maratelli

text: rice

text: Oryza sativa

text: Oryza sativa


Moroberekan

text: JIC

text: public

text: Moroberekan

text: rice

text: Oryza sativa

text: Oryza sativa


Nipponbare

text: JIC

text: public

text: Nipponbare

text: rice

text: Oryza sativa

text: Oryza sativa


Sariceltik

text: JIC

text: public

text: Sariceltik

text: rice

text: Oryza sativa

text: Oryza sativa


Tetep

text: JIC

text: public

text: Tetep

text: rice

text: Oryza sativa

text: Oryza sativa


text: public

tag: Namespace:Department of Biochemistry University of Cambridge UK

text: ArrayExpress

characteristic: broker name

text: fission yeast

text: Protocols: Samples were collected by filtration and fast-frozen in liquid nitrogen Cells were grown at 32C in EMM2 (Moreno et al. Methods Enzymology 194: 795). Cells were grown in EMM2 (Moreno et al. Methods Enzymology 194: 795) in the presence of 10 mM 3-Amino-1,2,4-triazole (3-AT) for 60 minutes at 32C. This treatment mimics histidine starvation. Cells were fixed by the addition of formaldehyde to a final concentration of 1%, followed by incubation for 30 minutes at 32°C. The reaction was stopped with 10 ml of 2.5 M glycine. Cells were washed extensively in phosphate-buffered saline solution (PBS), resuspended in lysis buffer (50 mM HEPES pH 7.6, 140 mM NaCl, 1 mM EDTA, 0.1% Triton X-100, 1 mM PMSF, and 1× complete protease inhibitor cocktail [Roche]), and lysed with a Fastprep 24 bead-beater (5 cycles of 20 seconds at level 6.5). Chromatin was sheared by sonication with a Bioruptor (Diagenode; 6 cycles of 5 minutes with 30 seconds on / 30 seconds off at high intensity). The lysates were cleared by centrifugation at 20,000 g for 10 minutes, and adjusted to 500 μl at 6 μg/μl total protein, as determined by the BCA assay. 100 µl of magnetic beads (Pan Mouse IgG or protein G, Life Technologies) were blocked with bovine serum albumin (BSA), and coated with 5 µg of mouse monoclonal antibodies against methylated H3K9 (H3K9me2, Abcam ab1120) or with anti-histone H3 rabbit polyclonal antibodies (Abcam ab1791), respectively. The extracts were incubated overnight with the coated beads at 4°C with rotation. Next, the beads were washed twice with 0.8 ml of 50 mM HEPES pH 7.6, 150 mM NaCl, 1 mM EDTA, 1% Triton X-100, and 0.1% sodium deoxycholate, twice in the same buffer containing 500 mM NaCl, twice in 10 mM Tris-HCl pH 8, 250 mM LiCl, 1 mM EDTA, 0.5% NP-40, and 0.5% sodium deoxycholate, and once in Tris-EDTA solution. Elution and crosslinking reversal were performed by incubating the beads in 200 μl of 10 mM Tris-HCl pH 8, 1 mM EDTA, and 1% SDS overnight at 65°C. DNA was purified with Qiagen's a MinElute PCR purification kit (Qiagen) following the manufacturer’s protocol, and eluted in 10 μl. Libraries were prepared using the Next ChIP-seq Library Prep Master Mix Set for Illumina (New England Biolabs) according to the manufacturer’s instructions

characteristic: description

characteristic: genotype

text: EMM2 growth

characteristic: growth condition

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe

characteristic: replicate

text: Schizosaccharomyces pombe


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Department of Biochemistry University of Cambridge UK

text: public

text: ArrayExpress

text: fission yeast

text: EMM2 growth

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe


characteristic: INSDC center name

text: public

characteristic: SRA accession

text: ArrayExpress

text: fission yeast

text: Protocols: Samples were collected by filtration and fast-frozen in liquid nitrogen Cells were grown at 32C in EMM2 (Moreno et al. Methods Enzymology 194: 795). Cells were fixed by the addition of formaldehyde to a final concentration of 1%, followed by incubation for 30 minutes at 32°C. The reaction was stopped with 10 ml of 2.5 M glycine. Cells were washed extensively in phosphate-buffered saline solution (PBS), resuspended in lysis buffer (50 mM HEPES pH 7.6, 140 mM NaCl, 1 mM EDTA, 0.1% Triton X-100, 1 mM PMSF, and 1× complete protease inhibitor cocktail [Roche]), and lysed with a Fastprep 24 bead-beater (5 cycles of 20 seconds at level 6.5). Chromatin was sheared by sonication with a Bioruptor (Diagenode; 6 cycles of 5 minutes with 30 seconds on / 30 seconds off at high intensity). The lysates were cleared by centrifugation at 20,000 g for 10 minutes, and adjusted to 500 μl at 6 μg/μl total protein, as determined by the BCA assay. 100 µl of magnetic beads (Pan Mouse IgG or protein G, Life Technologies) were blocked with bovine serum albumin (BSA), and coated with 5 µg of mouse monoclonal antibodies against methylated H3K9 (H3K9me2, Abcam ab1120) or with anti-histone H3 rabbit polyclonal antibodies (Abcam ab1791), respectively. The extracts were incubated overnight with the coated beads at 4°C with rotation. Next, the beads were washed twice with 0.8 ml of 50 mM HEPES pH 7.6, 150 mM NaCl, 1 mM EDTA, 1% Triton X-100, and 0.1% sodium deoxycholate, twice in the same buffer containing 500 mM NaCl, twice in 10 mM Tris-HCl pH 8, 250 mM LiCl, 1 mM EDTA, 0.5% NP-40, and 0.5% sodium deoxycholate, and once in Tris-EDTA solution. Elution and crosslinking reversal were performed by incubating the beads in 200 μl of 10 mM Tris-HCl pH 8, 1 mM EDTA, and 1% SDS overnight at 65°C. DNA was purified with Qiagen's a MinElute PCR purification kit (Qiagen) following the manufacturer’s protocol, and eluted in 10 μl. Libraries were prepared using the Next ChIP-seq Library Prep Master Mix Set for Illumina (New England Biolabs) according to the manufacturer’s instructions

text: EMM2 growth

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe


characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ArrayExpress

text: fission yeast

text: Protocols: Samples were collected by filtration and fast-frozen in liquid nitrogen Cells were grown in EMM2 containing 15 uM thiamine, washed three times in EMM2 without thiamine, resuspended in EMM2 without thiamine, and incubated at 32C for 18 hours. This treatment activates the thiamine-repressible nmt1 promoter. Cells were fixed by the addition of formaldehyde to a final concentration of 1%, followed by incubation for 30 minutes at 32°C. The reaction was stopped with 10 ml of 2.5 M glycine. Cells were washed extensively in phosphate-buffered saline solution (PBS), resuspended in lysis buffer (50 mM HEPES pH 7.6, 140 mM NaCl, 1 mM EDTA, 0.1% Triton X-100, 1 mM PMSF, and 1× complete protease inhibitor cocktail [Roche]), and lysed with a Fastprep 24 bead-beater (5 cycles of 20 seconds at level 6.5). Chromatin was sheared by sonication with a Bioruptor (Diagenode; 6 cycles of 5 minutes with 30 seconds on / 30 seconds off at high intensity). The lysates were cleared by centrifugation at 20,000 g for 10 minutes, and adjusted to 500 μl at 6 μg/μl total protein, as determined by the BCA assay. 100 µl of magnetic beads (Pan Mouse IgG or protein G, Life Technologies) were blocked with bovine serum albumin (BSA), and coated with 5 µg of mouse monoclonal antibodies against methylated H3K9 (H3K9me2, Abcam ab1120) or with anti-histone H3 rabbit polyclonal antibodies (Abcam ab1791), respectively. The extracts were incubated overnight with the coated beads at 4°C with rotation. Next, the beads were washed twice with 0.8 ml of 50 mM HEPES pH 7.6, 150 mM NaCl, 1 mM EDTA, 1% Triton X-100, and 0.1% sodium deoxycholate, twice in the same buffer containing 500 mM NaCl, twice in 10 mM Tris-HCl pH 8, 250 mM LiCl, 1 mM EDTA, 0.5% NP-40, and 0.5% sodium deoxycholate, and once in Tris-EDTA solution. Elution and crosslinking reversal were performed by incubating the beads in 200 μl of 10 mM Tris-HCl pH 8, 1 mM EDTA, and 1% SDS overnight at 65°C. DNA was purified with Qiagen's a MinElute PCR purification kit (Qiagen) following the manufacturer’s protocol, and eluted in 10 μl. Libraries were prepared using the Next ChIP-seq Library Prep Master Mix Set for Illumina (New England Biolabs) according to the manufacturer’s instructions

text: nmt induction

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe


text: public

characteristic: INSDC status

characteristic: Submitter Id

text: ArrayExpress

text: fission yeast

text: Protocols: Samples were collected by filtration and fast-frozen in liquid nitrogen Cells were grown in EMM2 containing 15 uM thiamine, washed three times in EMM2 containing 15 uM thiamine, resuspended in EMM2 containing 15 uM thiamine, and incubated at 32C for 18 hours. This treatment is used as a control for cells in which the thiamine-repressible nmt1 promoter is induced (see nmt induction protocol) Cells were fixed by the addition of formaldehyde to a final concentration of 1%, followed by incubation for 30 minutes at 32°C. The reaction was stopped with 10 ml of 2.5 M glycine. Cells were washed extensively in phosphate-buffered saline solution (PBS), resuspended in lysis buffer (50 mM HEPES pH 7.6, 140 mM NaCl, 1 mM EDTA, 0.1% Triton X-100, 1 mM PMSF, and 1× complete protease inhibitor cocktail [Roche]), and lysed with a Fastprep 24 bead-beater (5 cycles of 20 seconds at level 6.5). Chromatin was sheared by sonication with a Bioruptor (Diagenode; 6 cycles of 5 minutes with 30 seconds on / 30 seconds off at high intensity). The lysates were cleared by centrifugation at 20,000 g for 10 minutes, and adjusted to 500 μl at 6 μg/μl total protein, as determined by the BCA assay. 100 µl of magnetic beads (Pan Mouse IgG or protein G, Life Technologies) were blocked with bovine serum albumin (BSA), and coated with 5 µg of mouse monoclonal antibodies against methylated H3K9 (H3K9me2, Abcam ab1120) or with anti-histone H3 rabbit polyclonal antibodies (Abcam ab1791), respectively. The extracts were incubated overnight with the coated beads at 4°C with rotation. Next, the beads were washed twice with 0.8 ml of 50 mM HEPES pH 7.6, 150 mM NaCl, 1 mM EDTA, 1% Triton X-100, and 0.1% sodium deoxycholate, twice in the same buffer containing 500 mM NaCl, twice in 10 mM Tris-HCl pH 8, 250 mM LiCl, 1 mM EDTA, 0.5% NP-40, and 0.5% sodium deoxycholate, and once in Tris-EDTA solution. Elution and crosslinking reversal were performed by incubating the beads in 200 μl of 10 mM Tris-HCl pH 8, 1 mM EDTA, and 1% SDS overnight at 65°C. DNA was purified with Qiagen's a MinElute PCR purification kit (Qiagen) following the manufacturer’s protocol, and eluted in 10 μl. Libraries were prepared using the Next ChIP-seq Library Prep Master Mix Set for Illumina (New England Biolabs) according to the manufacturer’s instructions

text: nmt induction mock

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tag: Namespace:MONTANA STATE UNIVERSITY

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text: rainbow trout

text: Trout Bacterial composition raised in two water systems

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text: inlet

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text: Oncorhynchus mykiss

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text: Recirculating-Flow through study


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text: Gallus gallus

characteristic: host scientific name

text: Yes

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text: Broiler chicken

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text: DTU-GE

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text: No

text: Belgium

text: Belgium

characteristic: geographic location (country and/or sea)

text: not provided

text: Gallus gallus

text: Yes

text: Broiler chicken

text: Campylobacter jejuni

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text: No

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text: Belgium

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text: Belgium

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text: Broiler chicken

text: Campylobacter jejuni

text: Campylobacter jejuni


characteristic: ENA-LAST-UPDATE

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text: DTU-GE

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text: DTU2017_393_PRJ1085_Campylobacter_jejuni_S14FP02765

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text: Gallus gallus

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text: DTU-GE

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text: No

text: Belgium

text: Belgium

characteristic: geographic location (country and/or sea)

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text: Gallus gallus

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text: Broiler chicken

text: Campylobacter jejuni

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text: No

characteristic: environmental sample

text: Belgium

characteristic: geo loc name

text: Belgium

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text: not provided

text: Gallus gallus

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text: Broiler chicken

text: Campylobacter jejuni

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text: DTU-GE

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text: DTU-GE

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text: No

text: Belgium

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text: Gallus gallus

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text: Yes

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text: Belgium

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characteristic: geographic location (country and/or sea)

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text: Gallus gallus

text: Yes

text: Broiler chicken

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text: Campylobacter jejuni


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text: DTU-GE

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text: public

text: DTU2017_342_PRJ1085_Campylobacter_jejuni_Q1

text: DTU-GE

characteristic: broker name

text: DTU

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text: No

characteristic: environmental sample

text: United Kingdom

characteristic: geo loc name

text: United Kingdom

characteristic: geographic location (latitude)

text: not provided

text: Gallus gallus

text: Yes

text: Broiler chicken

text: Campylobacter jejuni

text: Campylobacter jejuni


characteristic: ENA-CHECKLIST

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text: DTU-GE

text: public

text: DTU2017_343_PRJ1085_Campylobacter_jejuni_Q2

text: DTU-GE

text: DTU

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characteristic: geographic location (longitude)

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characteristic: host health state

text: Gallus gallus

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

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text: Broiler chicken

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text: DTU-GE

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text: DTU2017_344_PRJ1085_Campylobacter_jejuni_Q4

characteristic: Submitter Id

text: DTU-GE

text: DTU

characteristic: collection date

text: No

text: United Kingdom

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: not provided

text: Gallus gallus

text: Yes

text: Broiler chicken

text: Campylobacter jejuni

characteristic: organism

text: Campylobacter jejuni


characteristic: ENA-CHECKLIST

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text: DTU-GE

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text: public

text: DTU2017_345_PRJ1085_Campylobacter_jejuni_Q6

text: DTU-GE

characteristic: broker name

text: DTU

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text: No

characteristic: environmental sample

text: United Kingdom

characteristic: geo loc name

text: United Kingdom

characteristic: geographic location (latitude)

text: not provided

text: Gallus gallus

text: Yes

text: Broiler chicken

text: Campylobacter jejuni

text: Campylobacter jejuni


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DTU-GE

text: public

text: DTU2017_346_PRJ1085_Campylobacter_jejuni_Q8

text: DTU-GE

text: DTU

text: No

text: United Kingdom

text: United Kingdom

characteristic: geographic location (longitude)

text: not provided

characteristic: host health state

text: Gallus gallus

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Broiler chicken

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text: DTU-GE

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characteristic: collection date

text: No

text: United Kingdom

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: not provided

text: Gallus gallus

text: Yes

text: Broiler chicken

text: Campylobacter jejuni

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text: public

text: DTU2017_348_PRJ1085_Campylobacter_jejuni_Q10

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text: No

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text: United Kingdom

characteristic: geo loc name

text: United Kingdom

characteristic: geographic location (latitude)

text: not provided

text: Gallus gallus

text: Yes

text: Broiler chicken

text: Campylobacter jejuni

text: Campylobacter jejuni


characteristic: ENA-CHECKLIST

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text: DTU-GE

text: public

text: DTU2017_349_PRJ1085_Campylobacter_jejuni_Q11

text: DTU-GE

text: DTU

text: No

text: United Kingdom

text: United Kingdom

characteristic: geographic location (longitude)

text: not provided

characteristic: host health state

text: Gallus gallus

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

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text: Broiler chicken

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text: DTU-GE

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text: DTU2017_350_PRJ1085_Campylobacter_jejuni_Q12

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text: DTU-GE

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characteristic: collection date

text: No

text: United Kingdom

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: not provided

text: Gallus gallus

text: Yes

text: Broiler chicken

text: Campylobacter jejuni

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text: Campylobacter jejuni


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text: DTU-GE

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text: public

text: DTU2017_351_PRJ1085_Campylobacter_jejuni_Q13

text: DTU-GE

characteristic: broker name

text: DTU

characteristic: collected by

text: No

characteristic: environmental sample

text: United Kingdom

characteristic: geo loc name

text: United Kingdom

characteristic: geographic location (latitude)

text: not provided

text: Gallus gallus

text: Yes

text: Broiler chicken

text: Campylobacter jejuni

text: Campylobacter jejuni


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DTU-GE

text: public

text: DTU2017_352_PRJ1085_Campylobacter_jejuni_Q14

text: DTU-GE

text: DTU

text: No

text: United Kingdom

text: United Kingdom

characteristic: geographic location (longitude)

text: not provided

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text: Gallus gallus

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

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text: Broiler chicken

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text: DTU-GE

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text: DTU2017_353_PRJ1085_Campylobacter_jejuni_Q15

characteristic: Submitter Id

text: DTU-GE

text: DTU

characteristic: collection date

text: No

text: United Kingdom

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: not provided

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text: Yes

text: Broiler chicken

text: Campylobacter jejuni

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text: Campylobacter jejuni


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text: DTU-GE

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text: public

text: DTU2017_354_PRJ1085_Campylobacter_jejuni_Q16

text: DTU-GE

characteristic: broker name

text: DTU

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text: No

characteristic: environmental sample

text: United Kingdom

characteristic: geo loc name

text: United Kingdom

characteristic: geographic location (latitude)

text: not provided

text: Gallus gallus

text: Yes

text: Broiler chicken

text: Campylobacter jejuni

text: Campylobacter jejuni


characteristic: ENA-CHECKLIST

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text: DTU-GE

text: public

text: DTU2017_355_PRJ1085_Campylobacter_jejuni_Q17

text: DTU-GE

text: DTU

text: No

text: United Kingdom

text: United Kingdom

characteristic: geographic location (longitude)

text: not provided

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text: Gallus gallus

characteristic: host scientific name

text: Yes

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text: Broiler chicken

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text: Campylobacter jejuni

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text: DTU-GE

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text: public

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text: DTU2017_356_PRJ1085_Campylobacter_jejuni_Q18

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text: DTU-GE

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text: No

text: United Kingdom

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: not provided

text: Gallus gallus

text: Yes

text: Broiler chicken

text: Campylobacter jejuni

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text: Campylobacter jejuni


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text: DTU-GE

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text: DTU2017_357_PRJ1085_Campylobacter_jejuni_Q19

text: DTU-GE

characteristic: broker name

text: DTU

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text: No

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text: United Kingdom

characteristic: geo loc name

text: United Kingdom

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text: not provided

text: Gallus gallus

text: Yes

text: Broiler chicken

text: Campylobacter jejuni

text: Campylobacter jejuni


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DTU-GE

text: public

text: DTU2017_359_PRJ1085_Campylobacter_jejuni_Q21

text: DTU-GE

text: DTU

text: No

text: United Kingdom

text: United Kingdom

characteristic: geographic location (longitude)

text: not provided

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text: Gallus gallus

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

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text: Broiler chicken

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text: DTU-GE

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text: DTU2017_360_PRJ1085_Campylobacter_jejuni_Q22

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text: DTU-GE

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text: No

text: United Kingdom

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: not provided

text: Gallus gallus

text: Yes

text: Broiler chicken

text: Campylobacter jejuni

characteristic: organism

text: Campylobacter jejuni


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text: DTU-GE

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text: public

text: DTU2017_361_PRJ1085_Campylobacter_jejuni_Q23

text: DTU-GE

characteristic: broker name

text: DTU

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text: No

characteristic: environmental sample

text: United Kingdom

characteristic: geo loc name

text: United Kingdom

characteristic: geographic location (latitude)

text: not provided

text: Gallus gallus

text: Yes

text: Broiler chicken

text: Campylobacter jejuni

text: Campylobacter jejuni


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: DTU-GE

text: public

text: DTU2017_362_PRJ1085_Campylobacter_jejuni_Q24

text: DTU-GE

text: DTU

text: No

text: United Kingdom

text: United Kingdom

characteristic: geographic location (longitude)

text: not provided

characteristic: host health state

text: Gallus gallus

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Broiler chicken

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text: Campylobacter jejuni

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text: DTU-GE

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text: public

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text: DTU2017_363_PRJ1085_Campylobacter_jejuni_Q26

characteristic: Submitter Id

text: DTU-GE

text: DTU

characteristic: collection date

text: No

text: United Kingdom

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: not provided

text: Gallus gallus

text: Yes

text: Broiler chicken

text: Campylobacter jejuni

characteristic: organism

text: Campylobacter jejuni


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characteristic: ENA-FIRST-PUBLIC

text: DTU-GE

characteristic: INSDC center name

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text: public

text: DTU2017_364_PRJ1085_Campylobacter_jejuni_Q27

text: DTU-GE

characteristic: broker name

text: DTU

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text: No

characteristic: environmental sample

text: United Kingdom

characteristic: geo loc name

text: United Kingdom

characteristic: geographic location (latitude)

text: not provided

text: Gallus gallus

text: Yes

text: Broiler chicken

text: Campylobacter jejuni

text: Campylobacter jejuni


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DTU-GE

text: public

text: DTU2017_365_PRJ1085_Campylobacter_jejuni_Q28

text: DTU-GE

text: DTU

text: No

text: United Kingdom

text: United Kingdom

characteristic: geographic location (longitude)

text: not provided

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text: Gallus gallus

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

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text: Broiler chicken

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text: DTU-GE

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text: DTU2017_366_PRJ1085_Campylobacter_jejuni_Q29

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text: DTU-GE

text: DTU

characteristic: collection date

text: No

text: United Kingdom

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: not provided

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text: Yes

text: Broiler chicken

text: Campylobacter jejuni

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text: Campylobacter jejuni


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text: DTU-GE

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text: DTU2017_367_PRJ1085_Campylobacter_jejuni_Q30

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text: DTU

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text: No

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text: United Kingdom

characteristic: geo loc name

text: United Kingdom

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text: not provided

text: Gallus gallus

text: Yes

text: Broiler chicken

text: Campylobacter jejuni

text: Campylobacter jejuni


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: DTU-GE

text: public

text: DTU2017_368_PRJ1085_Campylobacter_jejuni_Q31

text: DTU-GE

text: DTU

text: No

text: United Kingdom

text: United Kingdom

characteristic: geographic location (longitude)

text: not provided

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text: Gallus gallus

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

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text: Broiler chicken

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text: Campylobacter jejuni

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text: DTU-GE

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text: public

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text: DTU2017_369_PRJ1085_Campylobacter_jejuni_Q33

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text: DTU-GE

text: DTU

characteristic: collection date

text: No

text: United Kingdom

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: not provided

text: Gallus gallus

text: Yes

text: Broiler chicken

text: Campylobacter jejuni

characteristic: organism

text: Campylobacter jejuni


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characteristic: ENA-FIRST-PUBLIC

text: DTU-GE

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text: DTU2017_370_PRJ1085_Campylobacter_jejuni_Q34

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characteristic: broker name

text: DTU

characteristic: collected by

text: No

characteristic: environmental sample

text: United Kingdom

characteristic: geo loc name

text: United Kingdom

characteristic: geographic location (latitude)

text: not provided

text: Gallus gallus

text: Yes

text: Broiler chicken

text: Campylobacter jejuni

text: Campylobacter jejuni


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DTU-GE

text: public

text: DTU2017_371_PRJ1085_Campylobacter_jejuni_Q36

text: DTU-GE

text: DTU

text: No

text: United Kingdom

text: United Kingdom

characteristic: geographic location (longitude)

text: not provided

characteristic: host health state

text: Gallus gallus

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Broiler chicken

characteristic: isolation source host associated

text: Campylobacter jejuni

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characteristic: ENA-CHECKLIST

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text: DTU-GE

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text: public

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text: DTU2017_372_PRJ1085_Campylobacter_jejuni_Q37

characteristic: Submitter Id

text: DTU-GE

text: DTU

characteristic: collection date

text: No

text: United Kingdom

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: not provided

text: Gallus gallus

text: Yes

text: Broiler chicken

text: Campylobacter jejuni

characteristic: organism

text: Campylobacter jejuni


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DTU2017_373_PRJ1085_Campylobacter_jejuni_Q39

text: DTU-GE

characteristic: broker name

text: DTU

characteristic: collected by

text: No

characteristic: environmental sample

text: United Kingdom

characteristic: geo loc name

text: United Kingdom

characteristic: geographic location (latitude)

text: not provided

text: Gallus gallus

text: Yes

text: Broiler chicken

text: Campylobacter jejuni

text: Campylobacter jejuni


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: DTU-GE

text: public

text: DTU2017_374_PRJ1085_Campylobacter_jejuni_Q41

text: DTU-GE

text: DTU

text: No

text: United Kingdom

text: United Kingdom

characteristic: geographic location (longitude)

text: not provided

characteristic: host health state

text: Gallus gallus

characteristic: host scientific name

text: Yes

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text: Broiler chicken

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text: Campylobacter jejuni

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text: DTU-GE

text: DTU

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text: No

text: United Kingdom

text: United Kingdom

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text: Yes

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text: Finland

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text: France

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text: Campylobacter jejuni


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characteristic: host scientific name

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text: Gallus gallus

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text: Yes

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characteristic: geographic location (longitude)

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text: Gallus gallus

characteristic: host scientific name

text: Yes

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text: No

text: France

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text: broiler

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characteristic: ENA-LAST-UPDATE

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text: No

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characteristic: geographic location (country and/or sea)

text: not provided

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text: France

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text: not provided

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text: broiler

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characteristic: ENA-CHECKLIST

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text: DTU-GE

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text: Gallus gallus

characteristic: host scientific name

text: Yes

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text: DTU2016_2287_PRJ1085_Campylobacter_jejuni_14CV004

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text: DTU-GE

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characteristic: collection date

text: No

text: France

text: France

characteristic: geographic location (country and/or sea)

text: not provided

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text: Yes

text: broiler

text: Campylobacter jejuni

characteristic: organism

text: Campylobacter jejuni