characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SSI

text: public

characteristic: Submitter Id

text: BfR

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: not provided

text: Bos primigenius taurus

text: Yes

text: Salmonella enterica enterica

text: Typhimurium

text: Salmonella Typhimurium from food


status: PUBLIC

tag: attribute

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: BfR

text: Salmonella Typhimurium NGS data from Germany

characteristic: description

text: No

text: Germany

unit: DD

text: not provided

characteristic: host health state

text: Sus scrofa domesticus

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Salmonella enterica enterica

characteristic: isolate

text: Salmonella enterica subsp. enterica serovar Typhimurium

characteristic: organism

text: Typhimurium

characteristic: serovar

text: Salmonella Typhimurium from food

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SSI

text: public

characteristic: Submitter Id

text: BfR

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: not provided

text: Sus scrofa domesticus

text: Yes

text: Salmonella enterica enterica

text: faeces

characteristic: isolation source host associated

text: Typhimurium

text: Salmonella Typhimurium from food


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: BfR

characteristic: description

text: No

text: Germany

characteristic: geographic location (longitude)

text: not provided

text: Sus scrofa domesticus

text: Yes

text: Salmonella enterica enterica

text: product (kidney, muscle)

text: Typhimurium

text: Salmonella Typhimurium from food


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SSI

text: public

text: BfR

text: No

text: Germany

text: not provided

characteristic: host health state

text: Gallus gallus gallus

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Salmonella enterica enterica

characteristic: isolate

characteristic: organism

text: Typhimurium

characteristic: serovar

text: Salmonella Typhimurium from food

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

text: public

characteristic: Submitter Id

text: BfR

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: not provided

text: Sus scrofa domesticus

text: Yes

text: Salmonella enterica enterica

text: Product (Organs)

characteristic: isolation source host associated

text: Typhimurium

text: Salmonella Typhimurium from food


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: BfR

characteristic: description

text: No

text: Germany

characteristic: geographic location (longitude)

text: not provided

text: Bos primigenius taurus

text: Yes

text: Salmonella enterica enterica

text: faeces

text: Typhimurium

text: Salmonella Typhimurium from food


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

text: public

text: BfR

text: No

text: Germany

text: not provided

characteristic: host health state

text: Gallus gallus gallus

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Salmonella enterica enterica

characteristic: isolate

text: faeces

characteristic: organism

text: Typhimurium

characteristic: serovar

text: Salmonella Typhimurium from food

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SSI

text: public

characteristic: Submitter Id

text: BfR

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: not provided

text: Gallus gallus gallus

text: Yes

text: Salmonella enterica enterica

text: meat

characteristic: isolation source host associated

text: Typhimurium

text: Salmonella Typhimurium from food


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: BfR

characteristic: description

text: No

text: Germany

characteristic: geographic location (longitude)

text: not provided

text: Sus scrofa domesticus

text: Yes

text: Salmonella enterica enterica

text: meat

text: Typhimurium

text: Salmonella Typhimurium from food


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SSI

text: public

text: BfR

text: No

text: Germany

text: not provided

characteristic: host health state

text: Gallus gallus gallus

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Salmonella enterica enterica

characteristic: isolate

text: Eggs

characteristic: organism

text: Typhimurium

characteristic: serovar

text: Salmonella Typhimurium from food

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: BGI

text: public

characteristic: Submitter Id

characteristic: collection date

text: human gut

characteristic: environment (biome)

text: human associated habitat

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

text: Noval Meta-stabilizer project

characteristic: project name

text: human gut metagenome

text: Hiseq 4000

characteristic: sequencing method

text: DNA extracted from healthy Chinese

type: has member


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: BGI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: human gut

text: human associated habitat

text: feces

text: China

characteristic: geographic location (longitude)

text: human-gut

text: metagenome

text: human gut metagenome

text: Noval Meta-stabilizer project

text: human gut metagenome

text: DNA extracted from healthy Chinese


text: Homo sapiens

characteristic: ArrayExpress-SPECIES

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

characteristic: Submitter Id

text: human

characteristic: common name

text: Homo sapiens

characteristic: organism

text: Homo sapiens

characteristic: subject id

characteristic: title


text: Centre for Organismal Studies

text: public

tag: Namespace:Centre for Organismal Studies

text: maidenhair tree

text: WGS of Ginkgo biloba

characteristic: description

text: Ginkgo biloba

text: Ginkgo biloba

text: Ginkgo biloba


Burkholderia cenocepacia F01

characteristic: ENA-CHECKLIST

text: LMSM EA4312, UNIVERSITY OF ROUEN

text: public

text: Burkholderia cenocepacia F01

tag: Namespace:LMSM EA4312, UNIVERSITY OF ROUEN

characteristic: collection date

text: Environmental Burkholderia cenocepacia F01 isolated form an agricultural soil in the periphery of Ouagadougou in Burkina Faso

text: subsahelian climate

characteristic: environment (biome)

text: field planted with sorghum in the periphery of Ouagadougou

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Burkina Faso

characteristic: geographic location (country and/or sea)

unit: m

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

text: metagenome

characteristic: investigation type

text: Burkholderia cenocepacia

text: Burkholderia cenocepacia resistome

characteristic: project name

text: Burkholderia cenocepacia

text: Illumina + 454

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: Burkholderia cenocepacia F01


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

characteristic: SRA accession

tag: Namespace:ROBERT KOCH-INSTITUTE

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: other (non-clinical isolate)

characteristic: host

text: not provided

characteristic: host health state

text: Gallus gallus domesticus

characteristic: host scientific name

characteristic: isolate

text: cloacal swab

characteristic: isolation source

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 354

characteristic: serovar

text: E. coli isolate from livestock

type: AMR curated data - CABBAGE

value: ciprofloxacin

value: EUCAST

value: disk diffusion

value: resistant

value: Escherichia coli

value: ceftazidime

value: cefotaxime

value: colistin

value: susceptible

value: meropenem

value: cefoxitin

value: ampicillin

value: imipenem


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: Homo sapiens

text: not provided

text: Homo sapiens

text: rectal swab

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 457

text: clinical isolate of E. coli

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: Homo sapiens

text: not provided

text: Homo sapiens

text: urine

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 453

text: clinical isolate of E. coli


text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

characteristic: SRA accession

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: Homo sapiens

characteristic: host

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: urine

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 1463

text: clinical isolate of E. coli


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: Homo sapiens

text: not provided

text: Homo sapiens

characteristic: isolate

text: urine

characteristic: isolation source

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 141

characteristic: serovar

text: clinical isolate of E. coli


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: Homo sapiens

text: not provided

text: Homo sapiens

text: urine

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 355

text: clinical isolate of E. coli

characteristic: title


text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

characteristic: SRA accession

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: Homo sapiens

text: not provided

text: Homo sapiens

text: urine

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 10

text: clinical isolate of E. coli


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: Homo sapiens

characteristic: host

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: tracheal secretion

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 69

text: clinical isolate of E. coli


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: Homo sapiens

text: not provided

text: Homo sapiens

characteristic: isolate

text: urine

characteristic: isolation source

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 448

characteristic: serovar

text: clinical isolate of E. coli


text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: Homo sapiens

text: not provided

text: Homo sapiens

text: urine

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 23

text: clinical isolate of E. coli

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

characteristic: SRA accession

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: Homo sapiens

text: not provided

text: Homo sapiens

text: urine

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 131

text: clinical isolate of E. coli


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: Homo sapiens

characteristic: host

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: tissue

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 453

text: clinical isolate of E. coli


text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: Homo sapiens

text: not provided

text: Homo sapiens

characteristic: isolate

text: rectal swab

characteristic: isolation source

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 224

characteristic: serovar

text: clinical isolate of E. coli


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: Homo sapiens

text: not provided

text: Homo sapiens

text: not provided

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 131

text: clinical isolate of E. coli

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

characteristic: SRA accession

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: Homo sapiens

text: not provided

text: Homo sapiens

text: urine

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 963

text: clinical isolate of E. coli


text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: Homo sapiens

characteristic: host

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: urine

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 38

text: clinical isolate of E. coli


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: Homo sapiens

text: not provided

text: Homo sapiens

characteristic: isolate

text: not provided

characteristic: isolation source

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 131

characteristic: serovar

text: clinical isolate of E. coli


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: Homo sapiens

text: not provided

text: Homo sapiens

text: not provided

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 38

text: clinical isolate of E. coli

characteristic: title


text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

characteristic: SRA accession

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: Homo sapiens

text: not provided

text: Homo sapiens

text: not provided

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 86

text: clinical isolate of E. coli


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: Homo sapiens

characteristic: host

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: urine

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 10

text: clinical isolate of E. coli


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: Homo sapiens

text: healthy

text: Homo sapiens

characteristic: isolate

text: rectal swab

characteristic: isolation source

text: gastrointestinal system

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 69

characteristic: serovar

text: clinical isolate of E. coli


text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: other (non-clinical isolate)

text: Meat

text: chicken giblets

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 420

text: E . coli isolate from meat sample

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

characteristic: SRA accession

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: Meat

text: chicken drumstick

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 69

text: E . coli isolate from meat sample


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: other (non-clinical isolate)

characteristic: host

text: Meat

characteristic: host scientific name

text: food

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 38

text: E . coli isolate from meat sample


text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: Homo sapiens

text: healthy

characteristic: host health state

text: Homo sapiens

characteristic: isolate

text: faecal sample

characteristic: isolation source

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 115

characteristic: serovar

text: clinical isolate of E. coli


characteristic: ENA-CHECKLIST

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: other (non-clinical isolate)

text: Meat

text: chicken meat spiced

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 68

text: E . coli isolate from meat sample

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

characteristic: SRA accession

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: Meat

text: chicken schnitzel

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 117

text: E . coli isolate from meat sample


characteristic: External Id

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: Homo sapiens

characteristic: host

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 354

text: clinical isolate of E. coli


characteristic: ENA-CHECKLIST

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: Homo sapiens

text: not provided

text: Homo sapiens

characteristic: isolate

text: not provided

characteristic: isolation source

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 131

characteristic: serovar

text: clinical isolate of E. coli


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: other (non-clinical isolate)

text: Meat

text: chicken drumstick

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 57

text: E . coli isolate from meat sample

characteristic: title


characteristic: External Id

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

characteristic: SRA accession

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: Meat

text: chicken drumstick

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 57

text: E . coli isolate from meat sample


characteristic: ENA-CHECKLIST

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: other (non-clinical isolate)

characteristic: host

text: Meat

characteristic: host scientific name

text: chicken drumstick

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 57

text: E . coli isolate from meat sample


characteristic: ENA-FIRST-PUBLIC

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: Meat

characteristic: isolate

text: chicken drumstick

characteristic: isolation source

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 57

characteristic: serovar

text: E . coli isolate from meat sample


characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: other (non-clinical isolate)

text: Meat

text: chicken drumstick

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 155

text: E . coli isolate from meat sample

characteristic: title


characteristic: External Id

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

characteristic: SRA accession

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: Homo sapiens

text: not provided

characteristic: host health state

text: Homo sapiens

text: tracheal secretion

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 2450

text: clinical isolate of E. coli


characteristic: ENA-CHECKLIST

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

text: public

text: DEU

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: other (non-clinical isolate)

characteristic: host

text: Meat

characteristic: host scientific name

text: chicken drumstick

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 155

text: E . coli isolate from meat sample


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: Meat

characteristic: isolate

text: chicken drumstick

characteristic: isolation source

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 38

characteristic: serovar

text: E . coli isolate from meat sample


characteristic: External Id

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: other (non-clinical isolate)

text: not provided

text: Gallus gallus domesticus

text: boot swab sample

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 38

text: E. coli isolate from livestock

characteristic: title


characteristic: ENA-CHECKLIST

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

characteristic: SRA accession

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: not provided

characteristic: host health state

text: Gallus gallus domesticus

text: faecal sample

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 131

text: E. coli isolate from livestock


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: other (non-clinical isolate)

characteristic: host

text: not provided

text: Gallus gallus domesticus

characteristic: host scientific name

text: faecal sample

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 540

text: E. coli isolate from livestock


characteristic: External Id

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: not provided

text: Gallus gallus domesticus

characteristic: isolate

text: faecal sample

characteristic: isolation source

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 117

characteristic: serovar

text: E. coli isolate from livestock


characteristic: ENA-CHECKLIST

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: other (non-clinical isolate)

text: not provided

text: Gallus gallus domesticus

text: not provided

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 131

text: E. coli isolate from livestock

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

characteristic: SRA accession

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: not provided

characteristic: host health state

text: Gallus gallus domesticus

text: boot swab sample

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 131

text: E. coli isolate from livestock


characteristic: External Id

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

text: public

text: DEU

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: other (non-clinical isolate)

characteristic: host

text: not provided

text: Gallus gallus domesticus

characteristic: host scientific name

text: cloacal swab

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 38

text: E. coli isolate from livestock


characteristic: ENA-CHECKLIST

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: not provided

text: Gallus gallus domesticus

characteristic: isolate

text: cloacal swab

characteristic: isolation source

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 57

characteristic: serovar

text: E. coli isolate from livestock


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: other (non-clinical isolate)

text: not provided

text: Gallus gallus domesticus

text: faecal sample

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 57

text: E. coli isolate from livestock

characteristic: title


characteristic: External Id

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

characteristic: SRA accession

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: Meat

text: chicken drumstick

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 58

text: E . coli isolate from meat sample


characteristic: ENA-CHECKLIST

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: other (non-clinical isolate)

characteristic: host

text: not provided

characteristic: host health state

text: Gallus gallus domesticus

characteristic: host scientific name

text: faecal sample

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 1196

text: E. coli isolate from livestock


characteristic: ENA-FIRST-PUBLIC

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: Homo sapiens

text: not provided

text: Homo sapiens

characteristic: isolate

text: not provided

characteristic: isolation source

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 117

characteristic: serovar

text: clinical isolate of E. coli


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: other (non-clinical isolate)

text: not provided

text: Gallus gallus domesticus

text: faecal sample

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 117

text: E. coli isolate from livestock

characteristic: title


characteristic: ENA-CHECKLIST

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

characteristic: SRA accession

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: not provided

text: Gallus gallus domesticus

text: dust sample

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 57

text: E. coli isolate from livestock


characteristic: ENA-FIRST-PUBLIC

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: other (non-clinical isolate)

characteristic: host

text: not provided

characteristic: host health state

text: Sus scrofa

characteristic: host scientific name

text: boot swab sample

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 212

text: E. coli isolate from livestock


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: not provided

text: Gallus gallus domesticus

characteristic: isolate

text: faecal sample

characteristic: isolation source

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 117

characteristic: serovar

text: E. coli isolate from livestock


characteristic: ENA-CHECKLIST

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: other (non-clinical isolate)

text: not provided

text: Gallus gallus domesticus

text: dust sample

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 1158

text: E. coli isolate from livestock

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

characteristic: SRA accession

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: not provided

text: Gallus gallus domesticus

text: faecal sample

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 162

text: E. coli isolate from livestock


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: other (non-clinical isolate)

characteristic: host

text: not provided

characteristic: host health state

text: Gallus gallus domesticus

characteristic: host scientific name

text: faecal sample

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 2040

text: E. coli isolate from livestock


characteristic: ENA-CHECKLIST

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: not provided

text: Gallus gallus domesticus

characteristic: isolate

text: faecal sample

characteristic: isolation source

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 2040

characteristic: serovar

text: E. coli isolate from livestock


characteristic: ENA-FIRST-PUBLIC

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: Homo sapiens

text: not provided

text: Homo sapiens

text: faecal sample

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 127

text: clinical isolate of E. coli

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

characteristic: SRA accession

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: not provided

text: Gallus gallus domesticus

text: faecal sample

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 38

text: E. coli isolate from livestock


characteristic: ENA-CHECKLIST

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: other (non-clinical isolate)

characteristic: host

text: Meat

characteristic: host scientific name

text: chicken breast

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 350

text: E . coli isolate from meat sample


characteristic: ENA-FIRST-PUBLIC

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: not provided

characteristic: host health state

text: Gallus gallus domesticus

characteristic: isolate

text: faecal sample

characteristic: isolation source

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 10

characteristic: serovar

text: E. coli isolate from livestock


characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: other (non-clinical isolate)

text: not provided

text: Gallus gallus domesticus

text: faecal sample

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 2040

text: E. coli isolate from livestock

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

characteristic: SRA accession

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: not provided

text: Gallus gallus domesticus

text: faecal sample

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 3778

text: E. coli isolate from livestock


characteristic: ENA-FIRST-PUBLIC

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: other (non-clinical isolate)

characteristic: host

text: not provided

characteristic: host health state

text: Gallus gallus domesticus

characteristic: host scientific name

text: faecal sample

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 3778

text: E. coli isolate from livestock


characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: not provided

text: Gallus gallus domesticus

characteristic: isolate

text: faecal sample

characteristic: isolation source

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 429

characteristic: serovar

text: E. coli isolate from livestock


characteristic: ENA-CHECKLIST

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: other (non-clinical isolate)

text: not provided

text: Gallus gallus domesticus

text: faecal sample

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 155

text: E. coli isolate from livestock

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

characteristic: SRA accession

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: not provided

text: Gallus gallus domesticus

text: faecal sample

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 429

text: E. coli isolate from livestock


characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: other (non-clinical isolate)

characteristic: host

text: not provided

characteristic: host health state

text: Gallus gallus domesticus

characteristic: host scientific name

text: cloacal swab

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 420

text: E. coli isolate from livestock


characteristic: ENA-CHECKLIST

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: not provided

text: Gallus gallus domesticus

characteristic: isolate

text: faecal sample

characteristic: isolation source

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 38

characteristic: serovar

text: E. coli isolate from livestock


characteristic: ENA-FIRST-PUBLIC

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: other (non-clinical isolate)

text: not provided

text: Gallus gallus domesticus

text: dust sample

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 2309

text: E. coli isolate from livestock

characteristic: title


characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

characteristic: SRA accession

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: Meat

text: pork belly

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 10

text: E . coli isolate from meat sample


characteristic: ENA-CHECKLIST

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: other (non-clinical isolate)

characteristic: host

text: not provided

characteristic: host health state

text: Gallus gallus domesticus

characteristic: host scientific name

text: dust sample

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 2485

text: E. coli isolate from livestock


characteristic: ENA-FIRST-PUBLIC

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: not provided

text: Gallus gallus domesticus

characteristic: isolate

text: faecal sample

characteristic: isolation source

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 117

characteristic: serovar

text: E. coli isolate from livestock


characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: other (non-clinical isolate)

text: not provided

text: Gallus gallus domesticus

text: boot swab sample

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 3778

text: E. coli isolate from livestock

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

characteristic: SRA accession

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: not provided

text: Gallus gallus domesticus

text: boot swab sample

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 131

text: E. coli isolate from livestock


characteristic: ENA-FIRST-PUBLIC

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: other (non-clinical isolate)

characteristic: host

text: not provided

characteristic: host health state

text: Gallus gallus domesticus

characteristic: host scientific name

text: faecal sample

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 117

text: E. coli isolate from livestock


characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: not provided

text: Gallus gallus domesticus

characteristic: isolate

text: faecal sample

characteristic: isolation source

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 131

characteristic: serovar

text: E. coli isolate from livestock


characteristic: ENA-CHECKLIST

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: other (non-clinical isolate)

text: not provided

text: Gallus gallus domesticus

text: faecal sample

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 38

text: E. coli isolate from livestock

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

characteristic: SRA accession

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: not provided

text: Gallus gallus domesticus

text: boot swab sample

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 38

text: E. coli isolate from livestock


characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: other (non-clinical isolate)

characteristic: host

text: not provided

characteristic: host health state

text: Meleagris gallopavo

characteristic: host scientific name

text: dust sample

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 131

text: E. coli isolate from livestock


characteristic: ENA-CHECKLIST

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: not provided

text: Meleagris gallopavo

characteristic: isolate

text: faecal sample

characteristic: isolation source

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 1196

characteristic: serovar

text: E. coli isolate from livestock


characteristic: ENA-FIRST-PUBLIC

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: other (non-clinical isolate)

text: Meat

text: chicken breast

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 4937

text: E . coli isolate from meat sample

characteristic: title


characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

characteristic: SRA accession

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: not provided

text: Meleagris gallopavo

text: boot swab sample

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 1196

text: E. coli isolate from livestock


characteristic: ENA-CHECKLIST

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: other (non-clinical isolate)

characteristic: host

text: not provided

characteristic: host health state

text: Meleagris gallopavo

characteristic: host scientific name

text: faecal sample

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 1196

text: E. coli isolate from livestock


characteristic: ENA-FIRST-PUBLIC

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: not provided

text: Sus scrofa

characteristic: isolate

text: boot swab sample

characteristic: isolation source

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 2040

characteristic: serovar

text: E. coli isolate from livestock


characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: other (non-clinical isolate)

text: not provided

text: Sus scrofa

text: faecal sample

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 57

text: E. coli isolate from livestock

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

characteristic: SRA accession

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: not provided

text: Sus scrofa

text: boot swab sample

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 1196

text: E. coli isolate from livestock


characteristic: ENA-FIRST-PUBLIC

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: other (non-clinical isolate)

characteristic: host

text: not provided

characteristic: host health state

text: Sus scrofa

characteristic: host scientific name

text: boot swab sample

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 1196

text: E. coli isolate from livestock


characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: not provided

text: Sus scrofa

characteristic: isolate

text: boot swab sample

characteristic: isolation source

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 1196

characteristic: serovar

text: E. coli isolate from livestock


characteristic: ENA-CHECKLIST

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: other (non-clinical isolate)

text: not provided

text: Sus scrofa

text: boot swab sample

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 3778

text: E. coli isolate from livestock

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

characteristic: SRA accession

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: not provided

text: Sus scrofa

text: boot swab sample

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 1594

text: E. coli isolate from livestock


characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: other (non-clinical isolate)

characteristic: host

text: Meat

characteristic: host scientific name

text: carcass

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 2040

text: E. coli isolate from livestock


characteristic: ENA-CHECKLIST

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: not provided

characteristic: host health state

text: bos taurus

characteristic: isolate

text: boot swab sample

characteristic: isolation source

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 38

characteristic: serovar

text: E. coli isolate from livestock


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: other (non-clinical isolate)

text: diseased

text: Gallus gallus domesticus

text: not provided

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 117

text: E. coli isolate from livestock

characteristic: title


characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

characteristic: SRA accession

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: Meat

text: turkey breast

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 1421

text: E . coli isolate from meat sample


characteristic: ENA-CHECKLIST

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: Homo sapiens

characteristic: host

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: tracheal secretion

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 393

text: clinical isolate of E. coli


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: Meat

characteristic: isolate

text: pork meat raw

characteristic: isolation source

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 75

characteristic: serovar

text: E . coli isolate from meat sample


characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: Homo sapiens

text: not provided

text: Homo sapiens

text: not provided

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 131

text: clinical isolate of E. coli

characteristic: title


characteristic: ENA-CHECKLIST

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

characteristic: SRA accession

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: diseased

text: Sus scrofa

text: not provided

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 10

text: E. coli isolate from livestock


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

text: public

text: AmpC-producing Escherichia coli isolate

text: Germany

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: tracheal secretion

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 354

text: clinical isolate of E. coli


text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: Homo sapiens

characteristic: host

text: not provided

text: Homo sapiens

characteristic: isolate

text: not provided

characteristic: isolation source

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 58

characteristic: serovar

text: clinical isolate of E. coli


characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

text: public

text: CHE

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: Homo sapiens

text: not provided

text: Homo sapiens

text: not provided

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 69

text: clinical isolate of E. coli

characteristic: title


characteristic: ENA-CHECKLIST

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

characteristic: SRA accession

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: Homo sapiens

text: not provided

text: Homo sapiens

text: catheter urine

text: urinary tract

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 59

text: clinical isolate of E. coli


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: Homo sapiens

characteristic: host

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: rectal swab

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 93

text: clinical isolate of E. coli


characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: diseased

text: Gallus gallus domesticus

characteristic: isolate

text: not provided

characteristic: isolation source

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 3778

characteristic: serovar

text: E. coli isolate from livestock


characteristic: ENA-CHECKLIST

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: Homo sapiens

text: not provided

text: Homo sapiens

text: rectal swab

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 58

text: clinical isolate of E. coli

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

characteristic: SRA accession

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: Homo sapiens

text: not provided

text: Homo sapiens

text: not provided

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 69

text: clinical isolate of E. coli


characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: Homo sapiens

characteristic: host

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 10

text: clinical isolate of E. coli


characteristic: ENA-CHECKLIST

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: Homo sapiens

text: not provided

text: Homo sapiens

characteristic: isolate

text: not provided

characteristic: isolation source

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 4759

characteristic: serovar

text: clinical isolate of E. coli


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: Homo sapiens

text: not provided

text: Homo sapiens

text: not provided

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 362

text: clinical isolate of E. coli

characteristic: title


characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

characteristic: SRA accession

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: Homo sapiens

text: not provided

text: Homo sapiens

text: not provided

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 1844

text: clinical isolate of E. coli


characteristic: ENA-CHECKLIST

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: Homo sapiens

characteristic: host

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 694

text: clinical isolate of E. coli


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: Homo sapiens

text: not provided

text: Homo sapiens

characteristic: isolate

text: not provided

characteristic: isolation source

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 648

characteristic: serovar

text: clinical isolate of E. coli


characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: other (non-clinical isolate)

text: diseased

text: Gallus gallus domesticus

text: not provided

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 429

text: E. coli isolate from livestock

characteristic: title


characteristic: ENA-CHECKLIST

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

characteristic: SRA accession

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: Homo sapiens

text: not provided

text: Homo sapiens

text: not provided

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 744

text: clinical isolate of E. coli


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: Homo sapiens

characteristic: host

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: rectal swab

text: gastrointestinal system

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 348

text: clinical isolate of E. coli


characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: Homo sapiens

text: not provided

text: Homo sapiens

characteristic: isolate

text: not provided

characteristic: isolation source

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 131

characteristic: serovar

text: clinical isolate of E. coli


characteristic: ENA-CHECKLIST

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: Homo sapiens

text: not provided

text: Homo sapiens

text: not provided

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 38

text: clinical isolate of E. coli

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

characteristic: SRA accession

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: diseased

text: bos taurus

text: not provided

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 88

text: E. coli isolate from livestock


characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: other (non-clinical isolate)

characteristic: host

text: Meat

characteristic: host scientific name

text: chicken breast

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 117

text: E . coli isolate from meat sample


characteristic: ENA-CHECKLIST

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: Meat

characteristic: isolate

text: chicken breast

characteristic: isolation source

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 752

characteristic: serovar

text: E . coli isolate from meat sample


text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: other (non-clinical isolate)

text: Meat

text: chicken breast

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 2040

text: E . coli isolate from meat sample

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

characteristic: SRA accession

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: Meat

text: chicken breast

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 38

text: E . coli isolate from meat sample


characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

text: public

text: DEU

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: other (non-clinical isolate)

characteristic: host

text: Meat

text: chicken breast

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 131

text: E . coli isolate from meat sample


characteristic: ENA-CHECKLIST

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: Meat

characteristic: host scientific name

characteristic: isolate

text: chicken breast

characteristic: isolation source

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 38

text: E . coli isolate from meat sample


text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: other (non-clinical isolate)

text: Meat

text: chicken breast

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 117

characteristic: serovar

text: E . coli isolate from meat sample


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: Meat

text: chicken breast

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 69

text: E . coli isolate from meat sample

characteristic: title


characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

text: public

text: DEU

characteristic: SRA accession

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: other (non-clinical isolate)

text: Meat

text: chicken breast

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 69

text: E . coli isolate from meat sample


characteristic: ENA-CHECKLIST

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

characteristic: host

text: Meat

characteristic: host scientific name

characteristic: isolate

text: chicken drumstick

characteristic: isolation source

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 117

text: E . coli isolate from meat sample


text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: other (non-clinical isolate)

text: Meat

text: chicken meat

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 569

text: E . coli isolate from meat sample


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: Meat

text: chicken wings

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 58

characteristic: serovar

text: E . coli isolate from meat sample


characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

text: public

text: DEU

characteristic: SRA accession

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: Meat

text: chicken drumstick

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 58

text: E . coli isolate from meat sample

characteristic: title


characteristic: ENA-CHECKLIST

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: other (non-clinical isolate)

characteristic: host

text: Meat

characteristic: host scientific name

characteristic: isolate

text: chicken schnitzel

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 131

text: E . coli isolate from meat sample


text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: other (non-clinical isolate)

text: Meat

text: chicken drumstick

characteristic: isolation source

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 69

text: E . coli isolate from meat sample


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: Meat

text: turkey drumstick

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 6008

text: E . coli isolate from meat sample


characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

text: public

text: DEU

characteristic: SRA accession

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: Meat

text: turkey schnitzel

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 1463

characteristic: serovar

text: E . coli isolate from meat sample


characteristic: ENA-CHECKLIST

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: other (non-clinical isolate)

characteristic: host

text: Meat

characteristic: host scientific name

text: chicken meat

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 108

text: E . coli isolate from meat sample

characteristic: title


text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: other (non-clinical isolate)

text: Meat

characteristic: isolate

text: chicken breast

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 57

text: E . coli isolate from meat sample


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: Meat

text: chicken drumstick

characteristic: isolation source

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 38

text: E . coli isolate from meat sample


characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

text: public

text: DEU

characteristic: SRA accession

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: Meat

text: turkey breast

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 5763

text: E . coli isolate from meat sample


characteristic: ENA-CHECKLIST

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: other (non-clinical isolate)

characteristic: host

text: Meat

characteristic: host scientific name

text: turkey schnitzel

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 117

characteristic: serovar

text: E . coli isolate from meat sample


text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: other (non-clinical isolate)

text: Meat

text: chicken drumstick

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 10

text: E . coli isolate from meat sample

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: Meat

characteristic: isolate

text: chicken schnitzel

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 354

text: E . coli isolate from meat sample


characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

text: public

text: DEU

characteristic: SRA accession

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: Meat

text: chicken breast

characteristic: isolation source

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 1286

text: E . coli isolate from meat sample


characteristic: ENA-CHECKLIST

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: other (non-clinical isolate)

characteristic: host

text: Meat

characteristic: host scientific name

text: chicken breast

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 117

text: E . coli isolate from meat sample


text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: other (non-clinical isolate)

text: Meat

text: chicken schnitzel

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 2040

characteristic: serovar

text: E . coli isolate from meat sample


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: Meat

text: turkey schnitzel

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 10

text: E . coli isolate from meat sample

characteristic: title


characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

text: public

text: DEU

characteristic: SRA accession

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: Meat

characteristic: isolate

text: chicken meat raw

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 38

text: E . coli isolate from meat sample


characteristic: ENA-CHECKLIST

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: other (non-clinical isolate)

characteristic: host

text: Meat

characteristic: host scientific name

text: pork mincemeat

characteristic: isolation source

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 10

text: E . coli isolate from meat sample


text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: other (non-clinical isolate)

text: Meat

text: chicken breast

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 429

text: E . coli isolate from meat sample


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: Meat

text: chicken drumstick

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 68

characteristic: serovar

text: E . coli isolate from meat sample


characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

text: public

text: DEU

characteristic: SRA accession

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: Meat

text: chicken meat strips

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 429

text: E . coli isolate from meat sample

characteristic: title


characteristic: ENA-CHECKLIST

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: other (non-clinical isolate)

characteristic: host

text: Meat

characteristic: host scientific name

characteristic: isolate

text: turkey breast

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 2040

text: E . coli isolate from meat sample


text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: other (non-clinical isolate)

text: Meat

text: chicken meat

characteristic: isolation source

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 115

text: E . coli isolate from meat sample


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: Meat

text: chicken breast

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 38

text: E . coli isolate from meat sample


characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

text: public

text: DEU

characteristic: SRA accession

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: Meat

text: chicken breast

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 1818

characteristic: serovar

text: E . coli isolate from meat sample


characteristic: ENA-CHECKLIST

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: other (non-clinical isolate)

characteristic: host

text: Meat

characteristic: host scientific name

text: chicken breast

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 58

text: E . coli isolate from meat sample

characteristic: title


text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: other (non-clinical isolate)

text: Meat

characteristic: isolate

text: chicken drumstick

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 58

text: E . coli isolate from meat sample


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: Meat

text: chicken drumstick

characteristic: isolation source

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 373

text: E . coli isolate from meat sample


characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

text: public

text: DEU

characteristic: SRA accession

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: Meat

text: chicken drumstick

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: multilocus sequence type (ST) 38

text: E . coli isolate from meat sample


characteristic: ENA-CHECKLIST

text: ROBERT KOCH-INSTITUTE

text: public

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

characteristic: genus

text: Germany

text: other (non-clinical isolate)

characteristic: host

text: Meat

characteristic: host scientific name

text: chicken drumstick

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 429

characteristic: serovar

text: E . coli isolate from meat sample


text: ROBERT KOCH-INSTITUTE

characteristic: INSDC first public

text: public

text: DEU

characteristic: collection date

text: AmpC-producing Escherichia coli isolate

characteristic: description

text: Escherichia

text: Germany

characteristic: geographic location (country and/or sea)

text: other (non-clinical isolate)

text: Meat

text: chicken breast

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 38

text: E . coli isolate from meat sample

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DEU

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: other (non-clinical isolate)

text: Meat

characteristic: isolate

text: chicken breast

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 1594

text: E . coli isolate from meat sample


characteristic: ENA-LAST-UPDATE

text: ROBERT KOCH-INSTITUTE

characteristic: INSDC center name

text: public

text: DEU

characteristic: SRA accession

characteristic: Submitter Id

text: AmpC-producing Escherichia coli isolate

text: Escherichia

text: Germany

text: Homo sapiens

text: healthy

characteristic: host health state

text: Homo sapiens

text: feacal sample

characteristic: isolation source

text: Escherichia coli

text: Escherichia coli

text: multilocus sequence type (ST) 10

text: clinical isolate of E. coli


characteristic: ENA-CHECKLIST

text: public

tag: Namespace:Hospital General Universitario Gregorio Maranon

text: Mycobacterium tuberculosis

characteristic: organism

text: Mycobacterium tuberculosis


text: Hospital General Universitario Gregorio Maranon

characteristic: INSDC first public

text: public

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis


E-MTAB-6249:Sample 11

text: University of California, Irvine

text: public

text: E-MTAB-6249:Sample 11

tag: Namespace:University of California, Irvine

text: ArrayExpress

characteristic: broker name

text: postman butterfly

characteristic: common name

text: Protocols: Pupae of Heliconius melpomene were obtained from the Costa Rica Entomological Supply, Costa Rica. They were then frozen at -80C 1-3 days post-eclosure, and RNA was extracted. RNA was extracted from the head, antennae, legs and mouthparts (labial palps + proboscis) from individual butterflies using TRIzol (Life Technologies, Grand Island, NY) and purified using a NucleoSpin RNA II kit (Macherey-Nagel, Bethlehem, PA). Purified RNA was quantified using a Qubit 2.0 Fluorometer (Life Technologies, Grand Island, NY) and quality checked using an Agilent Bioanalyzer 2100. A TruSeq RNA Sample Preparation Kit v2 (Illumina, San Diego, CA) was used to prepare sequencing libraries. Libraries with distinct adapter sequences were quantified, quality checked, normalized, and pooled according to thier concentrations. Pooled libraries were run on a 2% agarose gel. A Geneclean III kit (MP Biomedical, Santa Ana, CA) was used to recover DNA from the gel (240-600 bp), and Agencourt AMPure XP (Beckman Coulter, Brea, CA) beads were used for a second purification.

characteristic: description

text: adult

characteristic: developmental stage

characteristic: individual

text: Heliconius melpomene

text: Heliconius melpomene

text: antenna

characteristic: organism part

text: Heliconius melpomene

text: male

characteristic: sex

text: Sample 11


E-MTAB-6249:Sample 7

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: University of California, Irvine

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-6249:Sample 7

text: ArrayExpress

text: postman butterfly

text: adult

text: Heliconius melpomene

text: Heliconius melpomene

text: antenna

text: Heliconius melpomene

text: female

text: Sample 7

characteristic: title


E-MTAB-6249:Sample 12

characteristic: ENA-LAST-UPDATE

text: University of California, Irvine

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-6249:Sample 12

characteristic: Submitter Id

text: ArrayExpress

text: postman butterfly

text: adult

text: Heliconius melpomene

text: Heliconius melpomene

text: eye and brain

text: Heliconius melpomene

text: male

text: Sample 12


E-MTAB-6249:Sample 5

characteristic: ENA-CHECKLIST

text: University of California, Irvine

characteristic: INSDC first public

text: public

text: E-MTAB-6249:Sample 5

text: ArrayExpress

text: postman butterfly

text: adult

text: Heliconius melpomene

characteristic: organism

text: Heliconius melpomene

text: eye and brain

text: Heliconius melpomene

text: male

text: Sample 5