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text: host-associated

text: mimarks-survey

text: Sus scrofa

text: Sus scrofa

text: Illumina MiSeq

text: 16S rRNA

characteristic: title


text: Michigan State University

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: pig

characteristic: common name

text: Carcass 6 rectum swab at 0 hours

text: Deciduous Forest

text: Field

text: Carcass

text: USA

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: Sus scrofa

characteristic: project name

text: Sus scrofa

text: Illumina MiSeq

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Michigan State University

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: pig

text: Carcass 6 rectum swab at 24 hours

characteristic: description

text: Deciduous Forest

characteristic: environment (biome)

text: Field

characteristic: environment (feature)

text: Carcass

text: USA

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: Sus scrofa

characteristic: organism

text: Sus scrofa

text: Illumina MiSeq

text: 16S rRNA


text: Michigan State University

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: pig

characteristic: common name

text: Carcass 6 rectum swab at 60 hours

text: Deciduous Forest

text: Field

text: Carcass

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

text: mimarks-survey

text: Sus scrofa

text: Sus scrofa

text: Illumina MiSeq

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Michigan State University

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: pig

text: Carcass 6 rectum swab at 72 hours

text: Deciduous Forest

text: Field

text: Carcass

text: USA

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

text: Sus scrofa

characteristic: project name

text: Sus scrofa

text: Illumina MiSeq

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment


text: Michigan State University

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: pig

characteristic: common name

text: Carcass 2 rectum swab at 0 hours

characteristic: description

text: Deciduous Forest

characteristic: environment (biome)

text: Field

characteristic: environment (feature)

text: Carcass

text: USA

text: host-associated

text: mimarks-survey

characteristic: investigation type

text: Sus scrofa

characteristic: organism

text: Sus scrofa

text: Illumina MiSeq

text: 16S rRNA


sasi ardi

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: sasi ardi

tag: Namespace:UNIVERSITY OF THE BASQUE COUNTRY (UPV/EHU)

text: sheep

text: Sasi ardi breed. 25 pooled female individuals.

text: Spain

characteristic: geographic location (country and/or sea)

text: Basque Country

characteristic: geographic location (region and locality)

text: Ovis aries

text: Ovis aries

text: Sasi ardi breed. SAS

characteristic: title


text: UNIVERSITY OF THE BASQUE COUNTRY (UPV/EHU)

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: sheep

text: Latxa breed under a genetic improvement program. 25 pooled female individuals.

text: Spain

text: Basque Country

text: Ovis aries

text: Ovis aries

text: Latxa breed under a genetic improvement program. LAS


text: public

text: sheep

characteristic: common name

text: Latxa breed excluded from a genetic improvement program. 25 female pooled individuals.

characteristic: description

text: Spain

text: Basque Country

text: Ovis aries

text: Ovis aries

text: Latxa breed excluded from a genetic improvement program.LAN


text: University of Antwerp, Belgium

text: public

tag: Namespace:University of Antwerp, Belgium

characteristic: collection date

text: Finland

text: diseased

characteristic: host health state

text: dog

characteristic: host scientific name

characteristic: isolate

text: stomach

characteristic: isolation source

text: Helicobacter salomonis

text: Helicobacter salomonis

text: Helicobacter salomonis


E-MTAB-5886:Sample 1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-5886:Sample 1

tag: Namespace:Beijing Institute of Heart, Lung and Blood Vessel Diseases

unit: week

characteristic: age

text: ArrayExpress

characteristic: broker name

text: monocyte

characteristic: cell type

text: house mouse

text: Protocols: 30 ul 10uM Cardiotoxin (CTX) was injected to TA muscle. 24 hours after injury, TA muscle was digested into single cells, and CD11b+ cells was sorted by FACS sortor. RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser. the mRNA is enriched by using the oligo(dT) magnetic beads (for eukaryotes). Mixed with the fragmentation buffer, the mRNA is fragmented into short fragments (about 200 bp). Then the first strand of cDNA is synthesized by using random hexamer-primer. Buffer, dNTPs, RNase H and DNA polymerase I are added to synthesize the second strand. The double strand cDNA is purified with magnetic beads. End reparation and 3'-end single nucleotide A (adenine) addition is then performed

text: wild type genotype

characteristic: genotype

text: Cardiotoxin injection into TA muscle

characteristic: injury

text: Mus musculus

characteristic: organism

text: Mus musculus

text: tibialis anterior muscle

characteristic: organism part

characteristic: phenotype

text: Mus musculus

text: male

characteristic: sex

characteristic: strain

text: Sample 1

type: has member


E-MTAB-5886:Sample 2

text: Beijing Institute of Heart, Lung and Blood Vessel Diseases

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5886:Sample 2

characteristic: Submitter Id

text: ArrayExpress

text: monocyte

text: house mouse

characteristic: common name

characteristic: description

text: wild type genotype

text: Cardiotoxin injection into TA muscle

text: Mus musculus

text: Mus musculus

text: tibialis anterior muscle

text: Mus musculus

text: male

text: Sample 2

characteristic: title


E-MTAB-5886:Sample 3

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-5886:Sample 3

characteristic: age

text: ArrayExpress

characteristic: broker name

text: monocyte

characteristic: cell type

text: house mouse

text: C3ar knockout

text: Cardiotoxin injection into TA muscle

text: Mus musculus

text: Mus musculus

text: tibialis anterior muscle

text: Mus musculus

text: male

text: Sample 3


E-MTAB-5886:Sample 4

text: public

text: E-MTAB-5886:Sample 4

text: ArrayExpress

text: monocyte

text: house mouse

text: C3ar knockout

characteristic: genotype

text: Cardiotoxin injection into TA muscle

characteristic: injury

text: Mus musculus

characteristic: organism

text: Mus musculus

text: tibialis anterior muscle

characteristic: organism part

characteristic: phenotype

text: Mus musculus

text: male

characteristic: sex

characteristic: strain

text: Sample 4


text: UOM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: mesothelial cell

text: Norway rat

characteristic: common name

text: Protocols: Omental cells, from female Wistar rats weighing 220-250g (Charles River, Cambridgeshire, UK) were liberated by trypsin digestion (0.25% Trypsin-EDTA; Sigma-Aldrich, Dorset, UK) for 20min at 37°C. All subsequent procedures were carried out on ice. Cells were incubated with anti-mesothelioma (HBME-1) primary IgM antibody (Dako, Cambridge, UK. 1:50 for 30min) in PBS, 3% BSA, similar to previously described [PubMed: 27403660]. Cells were washed with wash buffer (PBS, 10% foetal calf serum, FCS) and incubated with biotinylated secondary antibody (Vector Laboratories, Peterborough, UK. 1:100 for 30min) before further wash steps. Cells at a concentration of 1.5x106/80μl were incubated with Streptavidin-coated nanobeads (Biolegend, London, UK, 1:5) 15min. The cell suspension was then made up to a volume of 3ml with wash buffer and placed in the Mojo magnet (Biolegend) for 5min. Unconjugated cells were poured off and the sorted population re-suspended in cell culture media consisting of DMEM high glucose supplemented with 15% FCS, 4mM L-glutamine (Sigma-Aldrich), 1% v/v penicillin/streptomycin and 0.4μg/ml hydrocortisone (Sigma-Aldrich). Female Wistar rats weighing 220-250g (Charles River, Cambridgeshire, UK) were housed with free access to food and water under specific pathogen free conditions at the University of Manchester. Temperature 20-22 °C, Humidity 40-60%, Specified rodent pathogen free conditions, 12 hours light/dark cycle. Nutrients Rat and Mouse Standard Diet no.1 expanded (Ban Kingman). Sorted mesothelial cells were seeded at 5x104/cm2 in multi-well plates. Adherent cells were apparent 48-72h post culture, at which point cells were washed with HBSS. To induce MMT, cells were placed in 5% serum containing media for 24h before exposure to 1ng/ml TGFβ1 (R&D systems, Abington, UK). Cells were collected in RNA protect (Thermo Fisher Scientific, Runcorn, UK) and RNA extracted using the RNeasy Plus Mini Kit (Qiagen). Truseq stranded mRNA Assay

text: adult

characteristic: developmental stage

text: AB

characteristic: individual

text: Rattus norvegicus

text: Rattus norvegicus

text: omentum

text: Rattus norvegicus

text: female

text: Wistar


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UOM

text: public

text: ArrayExpress

characteristic: broker name

text: mesothelial cell

characteristic: cell type

text: Norway rat

characteristic: description

text: adult

text: CD

text: Rattus norvegicus

text: Rattus norvegicus

text: omentum

text: Rattus norvegicus

text: female

text: Wistar

characteristic: title


text: UOM

characteristic: INSDC center name

text: public

text: ArrayExpress

text: mesothelial cell

text: Norway rat

text: adult

text: EF

text: Rattus norvegicus

characteristic: organism

text: Rattus norvegicus

text: omentum

characteristic: organism part

text: Rattus norvegicus

text: female

characteristic: sex

text: Wistar

characteristic: strain


text: UOM

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: mesothelial cell

text: Norway rat

text: adult

text: GH

text: Rattus norvegicus

text: Rattus norvegicus

text: omentum

text: Rattus norvegicus

text: female

text: Wistar


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UOM

text: public

text: ArrayExpress

text: mesothelial cell

text: Norway rat

characteristic: common name

text: adult

characteristic: developmental stage

text: IJ

characteristic: individual

text: Rattus norvegicus

text: Rattus norvegicus

text: omentum

text: Rattus norvegicus

text: female

text: Wistar


Patient 01 iDCs

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Patient 01 iDCs

tag: Namespace:GERMANS TRIAS I PUJOL UNIVERSITY HOSPITAL

text: Monocyte-derived dendritic cell

characteristic: cell type

text: human

text: Unloaded DCs from Patient 01

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: Peripheral Blood

characteristic: tissue type

text: Patient 01 iDCs


Patient 01 PSAB-DCs

text: GERMANS TRIAS I PUJOL UNIVERSITY HOSPITAL

characteristic: INSDC center name

text: public

text: Patient 01 PSAB-DCs

text: Monocyte-derived dendritic cell

text: human

text: DCs from Patient 01 pulsed with autoantigen-loaded phosphatidylserine-liposomes

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Peripheral Blood

text: Patient 01 PSAB-DCs

characteristic: title


Patient 02 iDCs

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Patient 02 iDCs

text: Monocyte-derived dendritic cell

text: human

text: Unloaded DCs from Patient 02

text: Homo sapiens

text: Homo sapiens

text: Peripheral Blood

text: Patient 02 iDCs


Patient 02 PSAB-DCs

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Patient 02 PSAB-DCs

text: Monocyte-derived dendritic cell

text: human

text: DCs from Patient 02 pulsed with autoantigen-loaded phosphatidylserine-liposomes

text: Homo sapiens

text: Homo sapiens

text: Peripheral Blood

text: Patient 02 PSAB-DCs


Patient 03 iDCs

characteristic: ENA-CHECKLIST

text: public

text: Patient 03 iDCs

characteristic: Submitter Id

text: Monocyte-derived dendritic cell

text: human

text: Unloaded DCs from Patient 03

text: Homo sapiens

text: Homo sapiens

text: Peripheral Blood

text: Patient 03 iDCs


Patient 03 PSAB-DCs

characteristic: ENA-FIRST-PUBLIC

text: public

text: Patient 03 PSAB-DCs

text: Monocyte-derived dendritic cell

text: human

characteristic: common name

text: DCs from Patient 03 pulsed with autoantigen-loaded phosphatidylserine-liposomes

text: Homo sapiens

text: Homo sapiens

text: Peripheral Blood

text: Patient 03 PSAB-DCs


Patient 04 iDCs

text: public

text: Patient 04 iDCs

text: Monocyte-derived dendritic cell

text: human

text: Unloaded DCs from Patient 04

text: Homo sapiens

text: Homo sapiens

text: Peripheral Blood

text: Patient 04 iDCs


Patient 04 PSAB-DCs

text: public

text: Patient 04 PSAB-DCs

text: Monocyte-derived dendritic cell

text: human

text: DCs from Patient 04 pulsed with autoantigen-loaded phosphatidylserine-liposomes

text: Homo sapiens

text: Homo sapiens

text: Peripheral Blood

text: Patient 04 PSAB-DCs


Patient 05 iDCs

text: public

text: Patient 05 iDCs

text: Monocyte-derived dendritic cell

text: human

text: Unloaded DCs from Patient 05

text: Homo sapiens

text: Homo sapiens

text: Peripheral Blood

text: Patient 05 iDCs


Patient 05 PSAB-DCs

text: public

text: Patient 05 PSAB-DCs

text: Monocyte-derived dendritic cell

text: human

text: DCs from Patient 05 pulsed with autoantigen-loaded phosphatidylserine-liposomes

text: Homo sapiens

text: Homo sapiens

text: Peripheral Blood

text: Patient 05 PSAB-DCs


Patient 06 iDCs

text: public

text: Patient 06 iDCs

text: Monocyte-derived dendritic cell

text: human

text: Unloaded DCs from Patient 06

text: Homo sapiens

text: Homo sapiens

text: Peripheral Blood

text: Patient 06 iDCs


Patient 06 PSAB-DCs

text: public

text: Patient 06 PSAB-DCs

text: Monocyte-derived dendritic cell

text: human

text: DCs from Patient 06 pulsed with autoantigen-loaded phosphatidylserine-liposomes

text: Homo sapiens

text: Homo sapiens

text: Peripheral Blood

text: Patient 06 PSAB-DCs


Patient 07 iDCs

text: public

text: Patient 07 iDCs

text: Monocyte-derived dendritic cell

text: human

text: Unloaded DCs from Patient 07

text: Homo sapiens

text: Homo sapiens

text: Peripheral Blood

text: Patient 07 iDCs


Patient 07 PSAB-DCs

text: public

text: Patient 07 PSAB-DCs

text: Monocyte-derived dendritic cell

text: human

text: DCs from Patient 07 pulsed with autoantigen-loaded phosphatidylserine-liposomes

text: Homo sapiens

text: Homo sapiens

text: Peripheral Blood

text: Patient 07 PSAB-DCs


Patient 08 iDCs

text: public

text: Patient 08 iDCs

text: Monocyte-derived dendritic cell

text: human

text: Unloaded DCs from Patient 08

text: Homo sapiens

text: Homo sapiens

text: Peripheral Blood

text: Patient 08 iDCs


Patient 08 PSAB-DCs

text: public

text: Patient 08 PSAB-DCs

text: Monocyte-derived dendritic cell

text: human

text: DCs from Patient 08 pulsed with autoantigen-loaded phosphatidylserine-liposomes

text: Homo sapiens

text: Homo sapiens

text: Peripheral Blood

text: Patient 08 PSAB-DCs


text: VIRGINIA TECH

text: public

tag: Namespace:VIRGINIA TECH

text: CGGTATAGCAAT

characteristic: barcodesequence

characteristic: collection date

text: freshwater metagenome

text: TRUE

text: freshwater environment

characteristic: environment (biome)

text: tap water

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: Effect of heat shock on hot water plumbing microbiota and Legionella control

text: USA

characteristic: geographic location (country and/or sea)

unit: m

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host subject id

text: mimarks-survey

characteristic: investigation type

text: GTGTGYCAGCMGCCGCGGTAA

characteristic: linkerprimersequence

text: DistalTap

characteristic: location

characteristic: miseqrun

text: freshwater metagenome

text: Biofilm

characteristic: phase

text: Blacksburg

text: FALSE

text: Downward

characteristic: pipeorientation

text: Hot water plumbing microbiome

characteristic: project name

characteristic: replicate

text: Experimental

characteristic: rig

text: hot water system sample

characteristic: sample type

text: freshwater metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: TwoMonth

characteristic: slantedtime

characteristic: slantedtimeabbr

text: SLOAN

characteristic: sloan

text: No

characteristic: suspicious

text: hot water system sample

text: water

characteristic: water environmental package

characteristic: waterheatert

text: Medium

characteristic: waterusefrequency


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VIRGINIA TECH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: GACTCTGCTCAG

characteristic: barcodesequence

characteristic: collection date

text: freshwater metagenome

characteristic: common name

text: TRUE

text: freshwater environment

characteristic: environment (biome)

text: tap water

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host subject id

text: mimarks-survey

characteristic: investigation type

text: GTGTGYCAGCMGCCGCGGTAA

characteristic: linkerprimersequence

text: DistalTap

text: freshwater metagenome

characteristic: organism

text: Biofilm

text: Blacksburg

text: FALSE

text: Downward

text: Hot water plumbing microbiome

text: Experimental

text: hot water system sample

text: freshwater metagenome

text: Illumina MiSeq

text: TwoMonth

text: SLOAN

text: No

text: hot water system sample

characteristic: title

text: water

text: Medium


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VIRGINIA TECH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: GTCATGCTCCAG

text: freshwater metagenome

text: TRUE

text: freshwater environment

text: tap water

text: water

text: USA

text: mimarks-survey

text: GTGTGYCAGCMGCCGCGGTAA

text: DistalTap

characteristic: location

characteristic: miseqrun

text: freshwater metagenome

text: Biofilm

characteristic: phase

text: Blacksburg

text: FALSE

text: Downward

characteristic: pipeorientation

text: Hot water plumbing microbiome

characteristic: project name

characteristic: replicate

text: Experimental

characteristic: rig

text: hot water system sample

characteristic: sample type

text: freshwater metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: TwoMonth

characteristic: slantedtime

characteristic: slantedtimeabbr

text: SLOAN

characteristic: sloan

text: No

characteristic: suspicious

text: hot water system sample

text: water

characteristic: water environmental package

characteristic: waterheatert

text: Medium

characteristic: waterusefrequency


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VIRGINIA TECH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: TACCGAAGGTAT

characteristic: barcodesequence

characteristic: collection date

text: freshwater metagenome

characteristic: common name

text: TRUE

text: freshwater environment

characteristic: environment (biome)

text: tap water

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host subject id

text: mimarks-survey

characteristic: investigation type

text: GTGTGYCAGCMGCCGCGGTAA

characteristic: linkerprimersequence

text: DistalTap

text: freshwater metagenome

characteristic: organism

text: Biofilm

text: Blacksburg

text: FALSE

text: Downward

text: Hot water plumbing microbiome

text: Experimental

text: hot water system sample

text: freshwater metagenome

text: Illumina MiSeq

text: TwoMonth

text: SLOAN

text: No

text: hot water system sample

characteristic: title

text: water

text: Low


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VIRGINIA TECH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: TGAGTATGAGTA

text: freshwater metagenome

text: TRUE

text: freshwater environment

text: tap water

text: water

text: USA

text: mimarks-survey

text: GTGTGYCAGCMGCCGCGGTAA

text: DistalTap

characteristic: location

characteristic: miseqrun

text: freshwater metagenome

text: Biofilm

characteristic: phase

text: Blacksburg

text: FALSE

text: Downward

characteristic: pipeorientation

text: Hot water plumbing microbiome

characteristic: project name

characteristic: replicate

text: Experimental

characteristic: rig

text: hot water system sample

characteristic: sample type

text: freshwater metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: TwoMonth

characteristic: slantedtime

characteristic: slantedtimeabbr

text: SLOAN

characteristic: sloan

text: No

characteristic: suspicious

text: hot water system sample

text: water

characteristic: water environmental package

characteristic: waterheatert

text: Low

characteristic: waterusefrequency


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VIRGINIA TECH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: AATGGTTCAGCA

characteristic: barcodesequence

characteristic: collection date

text: freshwater metagenome

characteristic: common name

text: TRUE

text: freshwater environment

characteristic: environment (biome)

text: tap water

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host subject id

text: mimarks-survey

characteristic: investigation type

text: GTGTGYCAGCMGCCGCGGTAA

characteristic: linkerprimersequence

text: DistalTap

text: freshwater metagenome

characteristic: organism

text: Biofilm

text: Blacksburg

text: FALSE

text: Downward

text: Hot water plumbing microbiome

text: Experimental

text: hot water system sample

text: freshwater metagenome

text: Illumina MiSeq

text: TwoMonth

text: SLOAN

text: No

text: hot water system sample

characteristic: title

text: water

text: Low


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VIRGINIA TECH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: GAACCAGTACTC

text: freshwater metagenome

text: TRUE

text: freshwater environment

text: tap water

text: water

text: USA

text: mimarks-survey

text: GTGTGYCAGCMGCCGCGGTAA

text: DistalTap

characteristic: location

characteristic: miseqrun

text: freshwater metagenome

text: Biofilm

characteristic: phase

text: Blacksburg

text: FALSE

text: Upward

characteristic: pipeorientation

text: Hot water plumbing microbiome

characteristic: project name

characteristic: replicate

text: Control

characteristic: rig

text: hot water system sample

characteristic: sample type

text: freshwater metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: TwoMonth

characteristic: slantedtime

characteristic: slantedtimeabbr

text: SLOAN

characteristic: sloan

text: No

characteristic: suspicious

text: hot water system sample

text: water

characteristic: water environmental package

characteristic: waterheatert

text: High

characteristic: waterusefrequency


characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

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characteristic: INSDC center name

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text: GTGTGYCAGCMGCCGCGGTAA

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text: hot water system sample

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characteristic: ENA-CHECKLIST

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characteristic: location

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text: hot water system sample

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characteristic: ENA-CHECKLIST

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characteristic: ENA-CHECKLIST

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text: DistalTap

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characteristic: ENA-CHECKLIST

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characteristic: geographic location (longitude)

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characteristic: ENA-CHECKLIST

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characteristic: location

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text: hot water system sample

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text: Low

characteristic: waterusefrequency


characteristic: ENA-CHECKLIST

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characteristic: ENA-CHECKLIST

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characteristic: waterusefrequency


characteristic: ENA-CHECKLIST

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characteristic: ENA-CHECKLIST

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text: High

characteristic: waterusefrequency


characteristic: ENA-CHECKLIST

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characteristic: ENA-CHECKLIST

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characteristic: location

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characteristic: sequencing method

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text: hot water system sample

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text: Medium

characteristic: waterusefrequency


characteristic: ENA-CHECKLIST

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characteristic: ENA-CHECKLIST

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characteristic: location

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characteristic: waterusefrequency


characteristic: ENA-CHECKLIST

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characteristic: ENA-CHECKLIST

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characteristic: waterusefrequency


characteristic: ENA-CHECKLIST

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characteristic: ENA-CHECKLIST

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text: mimarks-survey

text: GTGTGYCAGCMGCCGCGGTAA

text: DistalTap

characteristic: location

characteristic: miseqrun

text: freshwater metagenome

text: Water

characteristic: phase

text: Blacksburg

text: FALSE

text: Upward

characteristic: pipeorientation

text: Hot water plumbing microbiome

characteristic: project name

characteristic: replicate

text: Experimental

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characteristic: sequencing method

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text: hot water system sample

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text: High

characteristic: waterusefrequency


characteristic: ENA-CHECKLIST

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characteristic: environment (biome)

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characteristic: geographic location (country and/or sea)

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text: mimarks-survey

characteristic: investigation type

text: GTGTGYCAGCMGCCGCGGTAA

characteristic: linkerprimersequence

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text: freshwater metagenome

characteristic: organism

text: Water

text: Blacksburg

text: FALSE

text: Upward

text: Hot water plumbing microbiome

text: Experimental

text: hot water system sample

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text: Illumina MiSeq

text: TwoMonth

text: SLOAN

text: No

text: hot water system sample

characteristic: title

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characteristic: ENA-CHECKLIST

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characteristic: External Id

text: VIRGINIA TECH

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text: USA

text: mimarks-survey

text: GTGTGYCAGCMGCCGCGGTAA

text: DistalTap

characteristic: location

characteristic: miseqrun

text: freshwater metagenome

text: Water

characteristic: phase

text: Blacksburg

text: FALSE

text: Upward

characteristic: pipeorientation

text: Hot water plumbing microbiome

characteristic: project name

characteristic: replicate

text: Experimental

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characteristic: sequencing method

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text: No

characteristic: suspicious

text: hot water system sample

text: water

characteristic: water environmental package

characteristic: waterheatert

text: High

characteristic: waterusefrequency


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VIRGINIA TECH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: CGACACGGAGAA

characteristic: barcodesequence

characteristic: collection date

text: freshwater metagenome

characteristic: common name

text: TRUE

text: freshwater environment

characteristic: environment (biome)

text: tap water

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host subject id

text: mimarks-survey

characteristic: investigation type

text: GTGTGYCAGCMGCCGCGGTAA

characteristic: linkerprimersequence

text: DistalTap

text: freshwater metagenome

characteristic: organism

text: Water

text: Blacksburg

text: FALSE

text: Upward

text: Hot water plumbing microbiome

text: Experimental

text: hot water system sample

text: freshwater metagenome

text: Illumina MiSeq

text: TwoMonth

text: SLOAN

text: No

text: hot water system sample

characteristic: title

text: water

text: Medium


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VIRGINIA TECH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: TCCACAGGGTTC

text: freshwater metagenome

text: TRUE

text: freshwater environment

text: tap water

text: water

text: USA

text: mimarks-survey

text: GTGTGYCAGCMGCCGCGGTAA

text: DistalTap

characteristic: location

characteristic: miseqrun

text: freshwater metagenome

text: Water

characteristic: phase

text: Blacksburg

text: FALSE

text: Upward

characteristic: pipeorientation

text: Hot water plumbing microbiome

characteristic: project name

characteristic: replicate

text: Experimental

characteristic: rig

text: hot water system sample

characteristic: sample type

text: freshwater metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: TwoMonth

characteristic: slantedtime

characteristic: slantedtimeabbr

text: SLOAN

characteristic: sloan

text: No

characteristic: suspicious

text: hot water system sample

text: water

characteristic: water environmental package

characteristic: waterheatert

text: Medium

characteristic: waterusefrequency


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VIRGINIA TECH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: GGAGAACGACAC

characteristic: barcodesequence

characteristic: collection date

text: freshwater metagenome

characteristic: common name

text: TRUE

text: freshwater environment

characteristic: environment (biome)

text: tap water

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host subject id

text: mimarks-survey

characteristic: investigation type

text: GTGTGYCAGCMGCCGCGGTAA

characteristic: linkerprimersequence

text: DistalTap

text: freshwater metagenome

characteristic: organism

text: Water

text: Blacksburg

text: FALSE

text: Upward

text: Hot water plumbing microbiome

text: Experimental

text: hot water system sample

text: freshwater metagenome

text: Illumina MiSeq

text: TwoMonth

text: SLOAN

text: No

text: hot water system sample

characteristic: title

text: water

text: Medium


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VIRGINIA TECH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: CCTACCATTGTT

text: freshwater metagenome

text: TRUE

text: freshwater environment

text: tap water

text: water

text: USA

text: mimarks-survey

text: GTGTGYCAGCMGCCGCGGTAA

text: DistalTap

characteristic: location

characteristic: miseqrun

text: freshwater metagenome

text: Water

characteristic: phase

text: Blacksburg

text: FALSE

text: Upward

characteristic: pipeorientation

text: Hot water plumbing microbiome

characteristic: project name

characteristic: replicate

text: Experimental

characteristic: rig

text: hot water system sample

characteristic: sample type

text: freshwater metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: TwoMonth

characteristic: slantedtime

characteristic: slantedtimeabbr

text: SLOAN

characteristic: sloan

text: No

characteristic: suspicious

text: hot water system sample

text: water

characteristic: water environmental package

characteristic: waterheatert

text: Low

characteristic: waterusefrequency


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VIRGINIA TECH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: TCCGGCGGGCAA

characteristic: barcodesequence

characteristic: collection date

text: freshwater metagenome

characteristic: common name

text: TRUE

text: freshwater environment

characteristic: environment (biome)

text: tap water

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host subject id

text: mimarks-survey

characteristic: investigation type

text: GTGTGYCAGCMGCCGCGGTAA

characteristic: linkerprimersequence

text: DistalTap

text: freshwater metagenome

characteristic: organism

text: Water

text: Blacksburg

text: FALSE

text: Upward

text: Hot water plumbing microbiome

text: Experimental

text: hot water system sample

text: freshwater metagenome

text: Illumina MiSeq

text: TwoMonth

text: SLOAN

text: No

text: hot water system sample

characteristic: title

text: water

text: Low


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VIRGINIA TECH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: TAATCCATAATC

text: freshwater metagenome

text: TRUE

text: freshwater environment

text: tap water

text: water

text: USA

text: mimarks-survey

text: GTGTGYCAGCMGCCGCGGTAA

text: DistalTap

characteristic: location

characteristic: miseqrun

text: freshwater metagenome

text: Water

characteristic: phase

text: Blacksburg

text: FALSE

text: Upward

characteristic: pipeorientation

text: Hot water plumbing microbiome

characteristic: project name

characteristic: replicate

text: Experimental

characteristic: rig

text: hot water system sample

characteristic: sample type

text: freshwater metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: TwoMonth

characteristic: slantedtime

characteristic: slantedtimeabbr

text: SLOAN

characteristic: sloan

text: No

characteristic: suspicious

text: hot water system sample

text: water

characteristic: water environmental package

characteristic: waterheatert

text: Low

characteristic: waterusefrequency


INF.BF.SL

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VIRGINIA TECH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: INF.BF.SL

characteristic: Submitter Id

text: CCTCCGTCATGG

characteristic: barcodesequence

characteristic: collection date

text: freshwater metagenome

characteristic: common name

text: TRUE

text: freshwater environment

characteristic: environment (biome)

text: tap water

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: INF.BF.SL

characteristic: host subject id

text: mimarks-survey

characteristic: investigation type

text: GTGTGYCAGCMGCCGCGGTAA

characteristic: linkerprimersequence

text: Influent

text: freshwater metagenome

characteristic: organism

text: Biofilm

text: Blacksburg

text: FALSE

text: Influent

text: Hot water plumbing microbiome

text: INF.BF.SL

text: Influent

text: hot water system sample

text: freshwater metagenome

text: Illumina MiSeq

text: TwoMonth

text: SLOAN

text: No

text: hot water system sample

characteristic: title

text: water

text: Influent


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VIRGINIA TECH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: TTCGATGCCGCA

text: freshwater metagenome

text: TRUE

text: freshwater environment

text: tap water

text: water

text: USA

text: mimarks-survey

text: GTGTGYCAGCMGCCGCGGTAA

text: RecirculationLine

characteristic: location

characteristic: miseqrun

text: freshwater metagenome

text: Biofilm

characteristic: phase

text: Blacksburg

text: FALSE

text: RecirculationLine

characteristic: pipeorientation

text: Hot water plumbing microbiome

characteristic: project name

characteristic: replicate

text: Control

characteristic: rig

text: hot water system sample

characteristic: sample type

text: freshwater metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: TwoMonth

characteristic: slantedtime

characteristic: slantedtimeabbr

text: SLOAN

characteristic: sloan

text: No

characteristic: suspicious

text: hot water system sample

text: water

characteristic: water environmental package

characteristic: waterheatert

text: RecirculationLine

characteristic: waterusefrequency


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VIRGINIA TECH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: AGAGGGTGATCG

characteristic: barcodesequence

characteristic: collection date

text: freshwater metagenome

characteristic: common name

text: TRUE

text: freshwater environment

characteristic: environment (biome)

text: tap water

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host subject id

text: mimarks-survey

characteristic: investigation type

text: GTGTGYCAGCMGCCGCGGTAA

characteristic: linkerprimersequence

text: RecirculationLine

text: freshwater metagenome

characteristic: organism

text: Biofilm

text: Blacksburg

text: FALSE

text: RecirculationLine

text: Hot water plumbing microbiome

text: Experimental

text: hot water system sample

text: freshwater metagenome

text: Illumina MiSeq

text: TwoMonth

text: SLOAN

text: No

text: hot water system sample

characteristic: title

text: water

text: RecirculationLine


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VIRGINIA TECH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: AGCTCTAGAAAC

text: freshwater metagenome

text: TRUE

text: freshwater environment

text: tap water

text: water

text: USA

text: mimarks-survey

text: GTGTGYCAGCMGCCGCGGTAA

text: DistalTap

characteristic: location

characteristic: miseqrun

text: freshwater metagenome

text: Biofilm

characteristic: phase

text: Blacksburg

text: FALSE

text: Downward

characteristic: pipeorientation

text: Hot water plumbing microbiome

characteristic: project name

characteristic: replicate

text: Control

characteristic: rig

text: hot water system sample

characteristic: sample type

text: freshwater metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: TwoMonth

characteristic: slantedtime

characteristic: slantedtimeabbr

text: SLOAN

characteristic: sloan

text: No

characteristic: suspicious

text: hot water system sample

text: water

characteristic: water environmental package

characteristic: waterheatert

text: High

characteristic: waterusefrequency


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VIRGINIA TECH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: CTGACACGAATA

characteristic: barcodesequence

characteristic: collection date

text: freshwater metagenome

characteristic: common name

text: TRUE

text: freshwater environment

characteristic: environment (biome)

text: tap water

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host subject id

text: mimarks-survey

characteristic: investigation type

text: GTGTGYCAGCMGCCGCGGTAA

characteristic: linkerprimersequence

text: DistalTap

text: freshwater metagenome

characteristic: organism

text: Biofilm

text: Blacksburg

text: FALSE

text: Downward

text: Hot water plumbing microbiome

text: Control

text: hot water system sample

text: freshwater metagenome

text: Illumina MiSeq

text: TwoMonth

text: SLOAN

text: No

text: hot water system sample

characteristic: title

text: water

text: High


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VIRGINIA TECH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: GCTGCCCACCTA

text: freshwater metagenome

text: TRUE

text: freshwater environment

text: tap water

text: water

text: USA

text: mimarks-survey

text: GTGTGYCAGCMGCCGCGGTAA

text: DistalTap

characteristic: location

characteristic: miseqrun

text: freshwater metagenome

text: Biofilm

characteristic: phase

text: Blacksburg

text: FALSE

text: Downward

characteristic: pipeorientation

text: Hot water plumbing microbiome

characteristic: project name

characteristic: replicate

text: Control

characteristic: rig

text: hot water system sample

characteristic: sample type

text: freshwater metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: TwoMonth

characteristic: slantedtime

characteristic: slantedtimeabbr

text: SLOAN

characteristic: sloan

text: No

characteristic: suspicious

text: hot water system sample

text: water

characteristic: water environmental package

characteristic: waterheatert

text: High

characteristic: waterusefrequency