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characteristic: environment (material)

text: USA

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (longitude)

text: Gulf of Mexico

text: metagenome

text: marine metagenome

text: bioturbated marine sediments

characteristic: project name

text: marine metagenome

text: sediment

characteristic: sediment environmental package

text: Illumina MiSeq

characteristic: sequencing method

text: bioturb_Sta 3 30-30.5 cm 2


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: BIGELOW LABORATORY FOR OCEAN SCIENCES

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: marine sediment

text: sediment

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Oregon Continental Shelf

characteristic: geographic location (region and locality)

text: metagenome

text: marine metagenome

characteristic: organism

text: bioturbated marine sediments

text: marine metagenome

text: sediment

text: Illumina MiSeq

text: bioturb_289 int 1 1

characteristic: title


text: BIGELOW LABORATORY FOR OCEAN SCIENCES

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: collection date

text: marine sediment

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

text: sediment

characteristic: environment (material)

text: USA

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (longitude)

text: Oregon Continental Shelf

text: metagenome

characteristic: investigation type

text: marine metagenome

characteristic: poorly-crystalline iron oxide (wt %)

characteristic: porewater ferrous iron [fe(ii)]

text: bioturbated marine sediments

text: marine metagenome

text: sediment

text: Illumina MiSeq

text: bioturb_289 int 1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: BIGELOW LABORATORY FOR OCEAN SCIENCES

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: marine sediment

text: sediment

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Oregon Continental Shelf

text: metagenome

text: marine metagenome

text: bioturbated marine sediments

characteristic: project name

text: marine metagenome

text: sediment

characteristic: sediment environmental package

text: Illumina MiSeq

characteristic: sequencing method

text: bioturb_290 int 2 1


text: BIGELOW LABORATORY FOR OCEAN SCIENCES

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: collection date

text: marine sediment

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

text: sediment

characteristic: environment (material)

text: USA

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (longitude)

text: Oregon Continental Shelf

characteristic: geographic location (region and locality)

text: metagenome

text: marine metagenome

characteristic: organism

text: bioturbated marine sediments

text: marine metagenome

text: sediment

text: Illumina MiSeq

text: bioturb_290 int 2

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: BIGELOW LABORATORY FOR OCEAN SCIENCES

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: marine sediment

text: sediment

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Oregon Continental Shelf

text: metagenome

characteristic: investigation type

text: marine metagenome

characteristic: poorly-crystalline iron oxide (wt %)

characteristic: porewater ferrous iron [fe(ii)]

text: bioturbated marine sediments

text: marine metagenome

text: sediment

text: Illumina MiSeq

text: bioturb_291 int 3 1


text: BIGELOW LABORATORY FOR OCEAN SCIENCES

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: collection date

text: marine sediment

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

text: sediment

characteristic: environment (material)

text: USA

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (longitude)

text: Oregon Continental Shelf

text: metagenome

text: marine metagenome

text: bioturbated marine sediments

characteristic: project name

text: marine metagenome

text: sediment

characteristic: sediment environmental package

text: Illumina MiSeq

characteristic: sequencing method

text: bioturb_291 int 3


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: BIGELOW LABORATORY FOR OCEAN SCIENCES

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: marine sediment

text: sediment

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Oregon Continental Shelf

characteristic: geographic location (region and locality)

text: metagenome

text: marine metagenome

characteristic: organism

text: bioturbated marine sediments

text: marine metagenome

text: sediment

text: Illumina MiSeq

text: bioturb_292 int 4 1

characteristic: title


text: BIGELOW LABORATORY FOR OCEAN SCIENCES

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: collection date

text: marine sediment

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

text: sediment

characteristic: environment (material)

text: USA

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (longitude)

text: Oregon Continental Shelf

text: metagenome

characteristic: investigation type

text: marine metagenome

characteristic: poorly-crystalline iron oxide (wt %)

characteristic: porewater ferrous iron [fe(ii)]

text: bioturbated marine sediments

text: marine metagenome

text: sediment

text: Illumina MiSeq

text: bioturb_292 int 4


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: BIGELOW LABORATORY FOR OCEAN SCIENCES

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: marine sediment

text: sediment

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Oregon Continental Shelf

text: metagenome

text: marine metagenome

text: bioturbated marine sediments

characteristic: project name

text: marine metagenome

text: sediment

characteristic: sediment environmental package

text: Illumina MiSeq

characteristic: sequencing method

text: bioturb_293 int 5 1


text: BIGELOW LABORATORY FOR OCEAN SCIENCES

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: collection date

text: marine sediment

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

text: sediment

characteristic: environment (material)

text: USA

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (longitude)

text: Oregon Continental Shelf

characteristic: geographic location (region and locality)

text: metagenome

text: marine metagenome

characteristic: organism

text: bioturbated marine sediments

text: marine metagenome

text: sediment

text: Illumina MiSeq

text: bioturb_293 int 5

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: BIGELOW LABORATORY FOR OCEAN SCIENCES

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: marine sediment

text: sediment

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Oregon Continental Shelf

text: metagenome

characteristic: investigation type

text: marine metagenome

characteristic: poorly-crystalline iron oxide (wt %)

characteristic: porewater ferrous iron [fe(ii)]

text: bioturbated marine sediments

text: marine metagenome

text: sediment

text: Illumina MiSeq

text: bioturb_277 int 7 1


text: BIGELOW LABORATORY FOR OCEAN SCIENCES

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: collection date

text: marine sediment

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

text: sediment

characteristic: environment (material)

text: USA

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (longitude)

text: Oregon Continental Shelf

text: metagenome

text: marine metagenome

text: bioturbated marine sediments

characteristic: project name

text: marine metagenome

text: sediment

characteristic: sediment environmental package

text: Illumina MiSeq

characteristic: sequencing method

text: bioturb_277 int 7


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: BIGELOW LABORATORY FOR OCEAN SCIENCES

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: marine iron-oxide lined worm burrow

text: sediment

text: Netherlands

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Oude Bieten Haven

characteristic: geographic location (region and locality)

text: metagenome

text: marine metagenome

characteristic: organism

text: no data

text: bioturbated marine sediments

text: marine metagenome

text: sediment

text: Illumina MiSeq

characteristic: title


text: BIGELOW LABORATORY FOR OCEAN SCIENCES

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: collection date

text: marine sediment

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

text: sediment

characteristic: environment (material)

text: Netherlands

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (longitude)

text: Oude Bieten Haven

text: metagenome

characteristic: investigation type

text: marine metagenome

characteristic: poorly-crystalline iron oxide (wt %)

text: no data

characteristic: porewater ferrous iron [fe(ii)]

text: bioturbated marine sediments

text: marine metagenome

text: sediment

text: Illumina MiSeq


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: BIGELOW LABORATORY FOR OCEAN SCIENCES

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: blank DNA extraction

text: sediment

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Bigelow Laboratory for Ocean Sciences

text: metagenome

text: marine metagenome

text: no data

text: no data

text: bioturbated marine sediments

characteristic: project name

text: marine metagenome

text: sediment

characteristic: sediment environmental package

text: Illumina MiSeq

characteristic: sequencing method


characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:LABORATORIO NACIONAL DE CIENCIA E TECNOLOGIA DO BI

text: Paenarthrobacter sp. HW13 was isolated from a enriched microbial community specialized in lignin degradation.

characteristic: description

text: No

characteristic: environmental sample

text: Enriched microbial community specialized in lignin degradation

characteristic: isolation source

text: Paenarthrobacter sp. BAB-5377

characteristic: organism

text: Paenarthrobacter sp. BAB-5377

text: Paenarthrobacter sp. HW13

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL UNIVERSITY

text: public

tag: Namespace:CORNELL UNIVERSITY

characteristic: collection date

characteristic: denitenzym

text: forest soil metagenomics

text: forest

characteristic: environment (biome)

text: forest

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: USA

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

characteristic: microbiomassc

characteristic: microbiomassn

characteristic: netnitrify

characteristic: netnmin

text: soil metagenome

text: Hubbard Brook

text: soil metagenome

text: Illumina HiSeq PE

text: soil

characteristic: soil environmental package

text: Mineral

characteristic: soil horizon

text: Soils are predominantly well-drained Spodosols (Haplorthods) and Inceptisols (Dystrochrepts)

text: Ca

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: forest soil metagenomics

characteristic: description

text: forest

text: forest

text: soil

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: mimarks-survey

text: soil metagenome

characteristic: organism

text: Hubbard Brook

characteristic: project name

text: soil metagenome

text: Illumina HiSeq PE

characteristic: sequencing method

text: soil

characteristic: title

text: Ca


characteristic: ENA-CHECKLIST

text: CORNELL UNIVERSITY

text: public

characteristic: collection date

characteristic: denitenzym

text: forest soil metagenomics

text: forest

characteristic: environment (biome)

text: forest

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: USA

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

characteristic: microbiomassc

characteristic: microbiomassn

characteristic: netnitrify

characteristic: netnmin

text: soil metagenome

text: Hubbard Brook

text: soil metagenome

text: Illumina HiSeq PE

text: soil

characteristic: soil environmental package

text: Mineral

characteristic: soil horizon


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CORNELL UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: forest soil metagenomics

characteristic: description

text: forest

text: forest

text: soil

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: mimarks-survey

text: soil metagenome

characteristic: organism

text: Hubbard Brook

characteristic: project name

text: soil metagenome

text: Illumina HiSeq PE

characteristic: sequencing method

text: soil

characteristic: title


characteristic: ENA-CHECKLIST

text: CME

text: public

characteristic: collection date

text: agriculture

characteristic: current land use

text: maize

characteristic: current vegetation

text: cropland Biome

characteristic: environment (biome)

text: field

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Brazil

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: Rhizosphere

characteristic: location

characteristic: maize genotype

unit: mm

characteristic: mean annual and seasonal precipitation

unit: ºC

characteristic: mean annual and seasonal temperature

text: metagenome

text: Low

characteristic: p level

text: Root-associated microbiome of maize genotypes with contrasting P use efficiency

text: metagenome

text: Illumina MiSeq

text: soil

characteristic: soil environmental package

text: Oxisol

characteristic: soil taxonomic/fao classification


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CME

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: agriculture

text: maize

characteristic: description

text: cropland Biome

text: field

text: soil

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: mimarks-survey

text: Root

text: metagenome

characteristic: organism

text: High

characteristic: project name

text: metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: soil

text: Oxisol

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: STATENS SERUM INSTITUT

text: public

tag: Namespace:STATENS SERUM INSTITUT

text: Streptococcus equi subsp. zooepidemicus

text: Streptococcus equi subsp. zooepidemicus

type: has member


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ED

text: public

text: domestic cat

characteristic: common name

text: TR+ tooth from TR+ cat

text: Adult

characteristic: dev stage

text: United Kingdom

text: Edinburgh

characteristic: geographic location (region and locality)

text: Felis catus

text: Felis catus

text: F

characteristic: sex

text: Tooth

characteristic: tissue type


text: ED

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: domestic cat

text: TR- tooth from TR- cat

text: Adult

text: United Kingdom

text: Edinburgh

text: Felis catus

text: Felis catus

text: F

text: Tooth

text: 1146N14_C12_TR -


text: ED

text: public

text: domestic cat

text: TR- tooth from TR+ cat

characteristic: description

text: Adult

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Edinburgh

text: Felis catus

characteristic: organism

text: Felis catus

text: F

text: Tooth

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ED

text: public

text: domestic cat

text: TR- tooth from TR+ cat (paired TR 1)

text: Adult

text: United Kingdom

text: Edinburgh

text: Felis catus

text: Felis catus

text: M

text: Tooth


text: ED

text: public

text: domestic cat

characteristic: common name

text: TR+ tooth from TR+ cat (paired TR 1)

text: Adult

characteristic: dev stage

text: United Kingdom

text: Edinburgh

characteristic: geographic location (region and locality)

text: Felis catus

text: Felis catus

text: M

characteristic: sex

text: Tooth


text: ED

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: domestic cat

text: TR- tooth from TR+ cat (paired TR 2)

text: Adult

text: United Kingdom

text: Edinburgh

text: Felis catus

text: Felis catus

text: F

text: Tooth

characteristic: tissue type


text: ED

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: domestic cat

text: TR+ tooth from TR+ cat (paired TR 2)

text: Adult

text: United Kingdom

text: Edinburgh

text: Felis catus

text: Felis catus

text: F

text: Tooth


text: ED

text: public

text: domestic cat

text: TR- tooth from TR+ cat (paired TR 3)

characteristic: description

text: Adult

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Edinburgh

text: Felis catus

characteristic: organism

text: Felis catus

text: F

text: Tooth

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ED

text: public

text: domestic cat

text: TR+ tooth from TR+ cat (paired TR 3)

text: Adult

text: United Kingdom

text: Edinburgh

text: Felis catus

text: Felis catus

text: F

text: Tooth


text: ED

text: public

text: domestic cat

characteristic: common name

text: TR- tooth from TR- cat

text: Adult

characteristic: dev stage

text: United Kingdom

text: Edinburgh

characteristic: geographic location (region and locality)

text: Felis catus

text: Felis catus

text: F

characteristic: sex

text: Tooth


text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ANSES

characteristic: collected by

text: No

characteristic: environmental sample

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Sheep Goat

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Ruminant

characteristic: isolation source host associated

text: Salmonella enterica

text: Salmonella enterica

text: Monophasic variant of S. Typhimurium

characteristic: serovar


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ANSES

characteristic: collection date

text: No

text: France

characteristic: geographic location (country and/or sea)

text: Pigs

text: Yes

text: Pig

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Monophasic variant of S. Typhimurium

characteristic: title


text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ANSES

characteristic: collected by

text: No

characteristic: environmental sample

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Other

text: Yes

text: Salmonella enterica

text: Salmonella enterica

text: Monophasic variant of S. Typhimurium


text: Homo sapiens

characteristic: ArrayExpress-SPECIES

text: Human Cell line (HEK293)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

characteristic: subject id


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MOREDUN RESEARCH INSTITUTE

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:MOREDUN RESEARCH INSTITUTE

characteristic: Submitter Id

text: rectal faeces (RF)

characteristic: bio material

text: Moredun Research Institute

text: Ovine non-infected control rectal faecal (RT) sample

characteristic: description

text: Yes

text: Ovis aries

characteristic: host scientific name

text: ovine metagenome

text: A

characteristic: sample sequence identifier

text: ovine metagenome

text: female

characteristic: sex

text: Ovine non-infected control


text: MOREDUN RESEARCH INSTITUTE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: rectal faeces (RF)

text: Moredun Research Institute

characteristic: collected by

characteristic: collection date

text: Yes

characteristic: environmental sample

text: Ovis aries

text: ovine metagenome

characteristic: organism

text: B

text: ovine metagenome

text: female

text: Ovine non-infected control

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MOREDUN RESEARCH INSTITUTE

text: public

text: rectal faeces (RF)

text: Moredun Research Institute

text: Yes

text: Ovis aries

text: ovine metagenome

text: C

text: ovine metagenome

text: female

text: Ovine non-infected control


text: MOREDUN RESEARCH INSTITUTE

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: rectal faeces (RF)

characteristic: bio material

text: Moredun Research Institute

text: Yes

text: Ovis aries

text: ovine metagenome

text: D

text: ovine metagenome

text: female

text: Ovine non-infected control


text: MOREDUN RESEARCH INSTITUTE

text: public

text: rectal faeces (RF)

text: Moredun Research Institute

characteristic: description

text: Yes

text: Ovis aries

characteristic: host scientific name

text: ovine metagenome

text: E

characteristic: sample sequence identifier

text: ovine metagenome

text: female

characteristic: sex

text: Ovine non-infected control


text: MOREDUN RESEARCH INSTITUTE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: rectal faeces (RF)

text: Moredun Research Institute

characteristic: collected by

text: Yes

text: Ovis aries

text: ovine metagenome

text: F

text: ovine metagenome

text: female

text: Ovine non-infected control


text: MOREDUN RESEARCH INSTITUTE

text: public

text: Terminal ileum content (TIC)

text: Moredun Research Institute

characteristic: collection date

text: Ovine non-infected control Terminal ileum content (TIC)sample

text: Yes

characteristic: environmental sample

text: Ovis aries

text: ovine metagenome

characteristic: organism

text: A

text: ovine metagenome

text: female

text: Ovine non-infected control

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MOREDUN RESEARCH INSTITUTE

text: public

text: Terminal ileum content (TIC)

text: Moredun Research Institute

text: Yes

text: Ovis aries

text: ovine metagenome

text: B

text: ovine metagenome

text: female

text: Ovine non-infected control


text: MOREDUN RESEARCH INSTITUTE

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Terminal ileum content (TIC)

characteristic: bio material

text: Moredun Research Institute

text: Ovine non-infected control Terminal ileum content (TIC) sample

text: Yes

text: Ovis aries

text: ovine metagenome

text: C

text: ovine metagenome

text: female

text: Ovine non-infected control


text: MOREDUN RESEARCH INSTITUTE

text: public

text: Terminal ileum content (TIC)

text: Moredun Research Institute

characteristic: description

text: Yes

text: Ovis aries

characteristic: host scientific name

text: ovine metagenome

text: D

characteristic: sample sequence identifier

text: ovine metagenome

text: female

characteristic: sex

text: Ovine non-infected control


text: MOREDUN RESEARCH INSTITUTE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Terminal ileum content (TIC)

text: Moredun Research Institute

characteristic: collected by

text: Yes

text: Ovis aries

text: ovine metagenome

text: E

text: ovine metagenome

text: female

text: Ovine non-infected control


text: MOREDUN RESEARCH INSTITUTE

text: public

text: Terminal ileum content (TIC)

text: Moredun Research Institute

characteristic: collection date

text: Yes

characteristic: environmental sample

text: Ovis aries

text: ovine metagenome

characteristic: organism

text: F

text: ovine metagenome

text: female

text: Ovine non-infected control

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MOREDUN RESEARCH INSTITUTE

text: public

text: rectal faeces (RF)

text: Moredun Research Institute

text: Ovine infected with Teladorssgia circumcincta larvae (L3) with monepantel (MPTL)-sensitive (S) parental strain (MTci7); untreated (SUT)- rectal faecal (RF) sample 1-5, paired sequences per sample

text: Yes

text: Ovis aries

text: ovine metagenome

text: ovine metagenome

text: female

text: Ovine infected with sensitive strain (MTci7) untreated (SUT)


text: MOREDUN RESEARCH INSTITUTE

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: rectal faeces (RF)

characteristic: bio material

text: Moredun Research Institute

text: Ovine infected with Teladorssgia circumcincta larvae (L3) with monepantel (MPTL)-sensitive (S) parental strain (MTci7); treated (ST)- rectal faecal (RF) sample 1-5, paired sequences per sample

text: Yes

text: Ovis aries

text: ovine metagenome

text: ovine metagenome

text: female

text: Ovine infected with sensitive strain (MTci7) treated (ST)


text: MOREDUN RESEARCH INSTITUTE

text: public

text: rectal faeces (RF)

text: Moredun Research Institute

text: Ovine infected with Teladorssgia circumcincta larvae (L3) with monepantel (MPTL)-resistant (R) strain (MTci7-12); untreated (RUT)- rectal faecal (RF) sample 1-5, paired sequences per sample

characteristic: description

text: Yes

text: Ovis aries

characteristic: host scientific name

text: ovine metagenome

characteristic: sample sequence identifier

text: ovine metagenome

text: female

characteristic: sex

text: Ovine infected with resistant strain (MTci7-12) untreated (RUT)


text: MOREDUN RESEARCH INSTITUTE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: rectal faeces (RF)

text: Moredun Research Institute

characteristic: collected by

text: Ovine infected with Teladorssgia circumcincta larvae (L3) with monepantel (MPTL)-resistant (R) strain (MTci7-12); treated (RT)- rectal faecal (RF) sample 1-5, paired sequences per sample

text: Yes

text: Ovis aries

text: ovine metagenome

text: ovine metagenome

text: female

text: Ovine infected with resistant strain (MTci7-12) treated (RT)


text: MOREDUN RESEARCH INSTITUTE

text: public

text: Terminal Ileal Mucosal Scraping (TIMS)

text: Moredun Research Institute

characteristic: collection date

text: Ovine infected with Teladorssgia circumcincta larvae (L3) with monepantel (MPTL)-sensitive (S) strain (MTci7); untreated (SUT)- terminal ileal mucosal scraping (TIMS) sample 1-5, paired sequences per sample

text: Yes

characteristic: environmental sample

text: Ovis aries

text: ovine metagenome

characteristic: organism

text: ovine metagenome

text: female

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MOREDUN RESEARCH INSTITUTE

text: public

text: Terminal Ileal Mucosal Scraping (TIMS)

text: Moredun Research Institute

text: Ovine infected with Teladorssgia circumcincta larvae (L3) with monepantel (MPTL)-sensitive (S) strain (MTci7); treated (ST)- terminal ileal mucosal scraping (TIMS) samples 1-5, paired sequences per sample

text: Yes

text: Ovis aries

text: ovine metagenome

text: ovine metagenome

text: female


text: MOREDUN RESEARCH INSTITUTE

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Terminal Ileal Mucosal Scraping (TIMS)

characteristic: bio material

text: Moredun Research Institute

text: Ovine infected with Teladorssgia circumcincta larvae (L3) with monepantel (MPTL)-resistant (R) strain (MTci7-12); untreated (RUT)- terminal ileal mucosal scraping (TIMS) samples 1-5, paired sequences per sample

text: Yes

text: Ovis aries

text: ovine metagenome

text: ovine metagenome

text: female


text: MOREDUN RESEARCH INSTITUTE

text: public

text: Terminal Ileal Mucosal Scraping (TIMS)

text: Moredun Research Institute

text: Ovine infected with Teladorssgia circumcincta larvae (L3) with monepantel (MPTL)-resistant (R) strain (MTci7-12); treated (RT)- terminal ileal mucosal scraping (TIMS) samples 1-5, paired sequences per sample

characteristic: description

text: Yes

text: Ovis aries

characteristic: host scientific name

text: ovine metagenome

characteristic: sample sequence identifier

text: ovine metagenome

text: female

characteristic: sex


text: IRB Barcelona

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:IRB Barcelona

text: fruit fly

characteristic: common name

text: Drosophila melanogaster

text: Drosophila melanogaster


text: DTU-GE

text: public

text: DTU Bioinformatics

characteristic: broker name

text: DTU

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Denmark

characteristic: geo loc name

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: not provided

characteristic: host health state

text: Sus scrofa

text: Yes

characteristic: is the sequenced pathogen host associated?

text: DTU2016_2013_PRJ1084_Salmonella_Infantis_F14_802_1_R1.fastq.gz

characteristic: isolate

text: Animal

characteristic: isolation source host associated

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Infantis

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: DTU Bioinformatics

text: DTU

text: No

text: Denmark

text: Denmark

text: not provided

text: Sus scrofa

characteristic: host scientific name

text: Yes

text: DTU2016_2015_PRJ1084_Salmonella_Infantis_F15_1181_1_R1.fastq.gz

text: Animal

text: Salmonella enterica

text: Salmonella enterica

text: Infantis


characteristic: INSDC last update

text: public

tag: Namespace:German Centre for Integrative Biodiversity Research (iDiv)

text: green lizard

characteristic: common name

text: Hungary

characteristic: geographic location (country and/or sea)

text: Tokaj

characteristic: geographic location (region and locality)

text: Lacerta viridis

text: Lacerta viridis

text: Female

characteristic: sex

text: Muscle from tail

characteristic: tissue type

text: Genome assembly of Lacerta viridis

characteristic: title


characteristic: ENA-CHECKLIST

text: German Centre for Integrative Biodiversity Research (iDiv)

text: public

text: France

text: Mâlain

text: Lacerta bilineata

characteristic: organism

text: Lacerta bilineata

text: Female

text: Muscle tissue from tail

text: Lacerta bilineata Genome assembly


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: DTU-GE

text: public

text: DTU Bioinformatics

characteristic: broker name

text: DTU

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Denmark

characteristic: geo loc name

text: Denmark

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: not provided

characteristic: host health state

text: Sus scrofa

text: Yes

characteristic: is the sequenced pathogen host associated?

text: DTU2016_2014_PRJ1084_Salmonella_Infantis_F14_1627_1_R1.fastq.gz

characteristic: isolate

text: Animal

characteristic: isolation source host associated

text: Salmonella enterica

text: Salmonella enterica

text: Infantis

characteristic: strain


characteristic: External Id

text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: DTU Bioinformatics

text: DTU

text: No

text: Denmark

text: Denmark

characteristic: geographic location (country and/or sea)

text: not provided

text: Sus scrofa

characteristic: host scientific name

text: Yes

text: Animal

text: Salmonella enterica

text: Salmonella enterica

text: Infantis


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: DTU-GE

text: public

text: DTU Bioinformatics

characteristic: broker name

text: DTU

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Denmark

characteristic: geo loc name

text: Denmark

text: not provided

text: Sus scrofa

text: Yes

text: Animal

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Infantis


characteristic: External Id

text: UNIVERSITY OF NEUCHATEL

characteristic: INSDC center name

text: public

tag: Namespace:UNIVERSITY OF NEUCHATEL

text: Environmental FNA study of microeukaryotes living in the Bromeliads water tank. 15 samples have been surveyed in an elevation gradient in Costa Rica.

characteristic: description

text: Tropical

characteristic: environment (biome)

text: Bromeliads

characteristic: environment (feature)

text: Sediment of the water tanks 1.1

characteristic: environment (material)

text: Yes

characteristic: further details

text: Costa Rica

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: uncultured eukaryote

text: TAReuk454FWD1 TAReukREV3

characteristic: pcr primers

text: uncultured eukaryote

characteristic: target gene

characteristic: target subfragment

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF NEUCHATEL

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Tropical

text: Bromeliads

text: Sediment of the water tanks 1.2

text: Yes

text: Costa Rica

characteristic: geographic location (country and/or sea)

text: uncultured eukaryote

text: TAReuk454FWD1 TAReukREV3

text: uncultured eukaryote


characteristic: External Id

text: UNIVERSITY OF NEUCHATEL

characteristic: INSDC center name

text: public

characteristic: description

text: Tropical

characteristic: environment (biome)

text: Bromeliads

characteristic: environment (feature)

text: Sediment of the water tanks 1.3

characteristic: environment (material)

text: Yes

characteristic: environmental sample

characteristic: further details

text: Costa Rica

text: uncultured eukaryote

characteristic: organism

text: TAReuk454FWD1 TAReukREV3

text: uncultured eukaryote


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF NEUCHATEL

text: public

text: Tropical

text: Bromeliads

text: Sediment of the water tanks 2.1

text: Yes

text: Costa Rica

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: uncultured eukaryote

text: TAReuk454FWD1 TAReukREV3

characteristic: pcr primers

text: uncultured eukaryote

characteristic: target gene

characteristic: target subfragment

characteristic: title


characteristic: External Id

text: UNIVERSITY OF NEUCHATEL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Tropical

text: Bromeliads

text: Sediment of the water tanks 2.2

text: Yes

text: Costa Rica

characteristic: geographic location (country and/or sea)

text: uncultured eukaryote

text: TAReuk454FWD1 TAReukREV3

text: uncultured eukaryote


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF NEUCHATEL

text: public

characteristic: description

text: Tropical

characteristic: environment (biome)

text: Bromeliads

characteristic: environment (feature)

text: Sediment of the water tanks 2.3

characteristic: environment (material)

text: Yes

characteristic: environmental sample

characteristic: further details

text: Costa Rica

text: uncultured eukaryote

characteristic: organism

text: TAReuk454FWD1 TAReukREV3

text: uncultured eukaryote


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF NEUCHATEL

characteristic: INSDC center name

text: public

text: Tropical

text: Bromeliads

text: Sediment of the water tanks 3.1

text: Yes

text: Costa Rica

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: uncultured eukaryote

text: TAReuk454FWD1 TAReukREV3

characteristic: pcr primers

text: uncultured eukaryote

characteristic: target gene

characteristic: target subfragment

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF NEUCHATEL

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Tropical

text: Bromeliads

text: Sediment of the water tanks 3.2

text: Yes

text: Costa Rica

characteristic: geographic location (country and/or sea)

text: uncultured eukaryote

text: TAReuk454FWD1 TAReukREV3

text: uncultured eukaryote


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF NEUCHATEL

text: public

characteristic: description

text: Tropical

characteristic: environment (biome)

text: Bromeliads

characteristic: environment (feature)

text: Sediment of the water tanks 3.3

characteristic: environment (material)

text: Yes

characteristic: environmental sample

characteristic: further details

text: Costa Rica

text: uncultured eukaryote

characteristic: organism

text: TAReuk454FWD1 TAReukREV3

text: uncultured eukaryote


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF NEUCHATEL

characteristic: INSDC center name

text: public

text: Tropical

text: Bromeliads

text: Sediment of the water tanks 4.1

text: Yes

text: Costa Rica

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: uncultured eukaryote

text: TAReuk454FWD1 TAReukREV3

characteristic: pcr primers

text: uncultured eukaryote

characteristic: target gene

characteristic: target subfragment

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF NEUCHATEL

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Tropical

text: Bromeliads

text: Sediment of the water tanks 4.2

text: Yes

text: Costa Rica

characteristic: geographic location (country and/or sea)

text: uncultured eukaryote

text: TAReuk454FWD1 TAReukREV3

text: uncultured eukaryote


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF NEUCHATEL

text: public

characteristic: description

text: Tropical

characteristic: environment (biome)

text: Bromeliads

characteristic: environment (feature)

text: Sediment of the water tanks 4.3

characteristic: environment (material)

text: Yes

characteristic: environmental sample

characteristic: further details

text: Costa Rica

text: uncultured eukaryote

characteristic: organism

text: TAReuk454FWD1 TAReukREV3

text: uncultured eukaryote


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF NEUCHATEL

characteristic: INSDC center name

text: public

text: Tropical

text: Bromeliads

text: Sediment of the water tanks 5.1

text: Yes

text: Costa Rica

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: uncultured eukaryote

text: TAReuk454FWD1 TAReukREV3

characteristic: pcr primers

text: uncultured eukaryote

characteristic: target gene

characteristic: target subfragment

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF NEUCHATEL

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Tropical

text: Bromeliads

text: Sediment of the water tanks 5.2

text: Yes

text: Costa Rica

characteristic: geographic location (country and/or sea)

text: uncultured eukaryote

text: TAReuk454FWD1 TAReukREV3

text: uncultured eukaryote


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF NEUCHATEL

text: public

characteristic: description

text: Tropical

characteristic: environment (biome)

text: Bromeliads

characteristic: environment (feature)

text: Sediment of the water tanks 5.3

characteristic: environment (material)

text: Yes

characteristic: environmental sample

characteristic: further details

text: Costa Rica

text: uncultured eukaryote

characteristic: organism

text: TAReuk454FWD1 TAReukREV3

text: uncultured eukaryote


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: DTU-GE

characteristic: INSDC center name

text: public

text: DTU Bioinformatics

characteristic: broker name

text: DTU

characteristic: collected by

text: No

text: Denmark

characteristic: geo loc name

text: Denmark

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: not provided

characteristic: host health state

text: Sus scrofa

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Animal

characteristic: isolation source host associated

text: Salmonella enterica

text: Salmonella enterica

text: Infantis

characteristic: strain


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DTU-GE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: DTU Bioinformatics

text: DTU

characteristic: collection date

text: No

characteristic: environmental sample

text: Denmark

text: Denmark

characteristic: geographic location (country and/or sea)

text: not provided

text: Sus scrofa

text: Yes

text: Animal

text: Salmonella enterica

text: Salmonella enterica

text: Infantis


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: DTU-GE

characteristic: INSDC center name

text: public

text: DTU Bioinformatics

characteristic: broker name

text: DTU

characteristic: collected by

text: No

text: Denmark

characteristic: geo loc name

text: Denmark

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: not provided

text: Sus scrofa

text: Yes

text: Animal

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Infantis


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC first public

text: public

text: ANSES

text: No

text: France

text: Pigs

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Pig

characteristic: isolation source host associated

text: Salmonella enterica

text: Salmonella enterica

text: S. Typhimurium

characteristic: serovar

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ANSES

characteristic: collection date

text: No

characteristic: environmental sample

text: France

characteristic: geographic location (country and/or sea)

text: Other

text: Yes

text: Salmonella enterica

text: Salmonella enterica

text: S. Typhimurium


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

text: public

text: ANSES

characteristic: collected by

text: No

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Pigs

text: Yes

text: Pig

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Monophasic variant of S. Typhimurium


text: SSI

characteristic: INSDC first public

text: public

text: ANSES

text: No

text: France

text: Yes

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Salmonella enterica

text: Salmonella enterica

text: Monophasic variant of S. Typhimurium

characteristic: serovar

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ANSES

text: No

text: France

text: Turkey

characteristic: host scientific name

text: Yes

text: Poultry

characteristic: isolation source host associated

text: Salmonella enterica

text: Salmonella enterica

text: S. Typhimurium


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: ANSES

characteristic: collection date

text: No

characteristic: environmental sample

text: France

characteristic: geographic location (country and/or sea)

text: Broilers

text: Yes

text: Poultry

text: Salmonella enterica

text: Salmonella enterica

text: Monophasic variant of S. Typhimurium


text: SSI

characteristic: INSDC first public

text: public

text: ANSES

characteristic: collected by

text: No

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Layers

text: Yes

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Poultry

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Monophasic variant of S. Typhimurium


text: Plasmodium falciparum 3D7

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Plasmodium falciparum 3D7

characteristic: common name

text: Plasmodium falciparum 3D7

text: Plasmodium falciparum 3D7


text: Plasmodium falciparum 3D7

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: Plasmodium falciparum 3D7

text: Plasmodium falciparum 3D7

text: Plasmodium falciparum 3D7


text: Plasmodium falciparum

text: SC

characteristic: INSDC first public

text: public

text: Plasmodium falciparum

text: Plasmodium falciparum 3D7

text: Plasmodium falciparum 3D7


text: Plasmodium berghei

text: SC

text: public

text: Plasmodium berghei

text: Plasmodium berghei

text: Plasmodium berghei


text: Plasmodium knowlesi

text: SC

text: public

text: Plasmodium knowlesi

text: Plasmodium knowlesi

text: Plasmodium knowlesi


text: Plasmodium knowlesi

text: SC

text: public

text: Plasmodium knowlesi

text: Plasmodium knowlesi

text: Plasmodium knowlesi

characteristic: subject id

characteristic: title


text: male

characteristic: ArrayExpress-SEX

text: Homo sapiens

text: SC

text: public

text: human

text: Male

characteristic: gender

text: Homo sapiens

text: Homo sapiens


text: DTU-GE

text: public

text: DTU Bioinformatics

characteristic: broker name

text: DTU

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Denmark

characteristic: geo loc name

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: not provided

characteristic: host health state

text: Sus scrofa

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Animal

characteristic: isolation source host associated

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Infantis

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: DTU Bioinformatics

text: DTU

text: No

text: Denmark

text: Denmark

text: not provided

text: Sus scrofa

text: Yes

text: Animal

text: Salmonella enterica

text: Salmonella enterica

text: Infantis


text: DTU-GE

text: public

text: DTU Bioinformatics

characteristic: broker name

text: DTU

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Denmark

characteristic: geo loc name

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: not provided

characteristic: host health state

text: Sus scrofa

text: Yes

text: Animal

text: Salmonella enterica

text: Salmonella enterica

text: Infantis


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

tag: Namespace:MAX PLANCK INSTITUTE FOR DEVELOPMENTAL BIOLOGY

text: Transcriptome of mixed-stage P. pacificus worms

characteristic: description

text: Pristionchus pacificus

characteristic: organism

text: Pristionchus pacificus

characteristic: title


characteristic: External Id

text: MAX PLANCK INSTITUTE FOR DEVELOPMENTAL BIOLOGY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Pristionchus pacificus

text: Pristionchus pacificus


text: public

characteristic: Submitter Id

text: Transcriptome of mixed-stage Pristionchus exspectatus worms

text: Pristionchus exspectatus

text: Pristionchus exspectatus


text: public

text: Transcriptome of mixed-stage Pristionchus arcanus worms

text: Pristionchus arcanus

text: Pristionchus arcanus


Rhopalosiphum padi clonal line

text: The James Hutton Institute

text: public

text: Rhopalosiphum padi clonal line

tag: Namespace:The James Hutton Institute

text: Peter Thorpe

characteristic: collected by

text: bird cherry-oat aphid

characteristic: common name

text: clonal line

characteristic: culture collection

text: Rhopalosiphum padi Bird cherry-oat aphid

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Hordeum vulgare cv. Optic

characteristic: host scientific name

text: Growth chamber 18 degress C. 16 h light

characteristic: isolation source

text: Hordeum vulgare cv. Optic

characteristic: lab host

text: asexual parthenogenesis

characteristic: mating type

text: Rhopalosiphum padi

text: Rhopalosiphum padi

text: Rhopalosiphum padi


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SSI

text: public

text: ANSES

characteristic: collection date

text: No

characteristic: environmental sample

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Pig

text: Yes

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Pig

characteristic: isolation source host associated

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: S. Typhimurium

characteristic: serovar

text: last


characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ANSES

characteristic: collected by

text: No

text: France

characteristic: geographic location (country and/or sea)

text: Ruminant

text: Yes

text: Ruminant

text: Salmonella enterica

text: Salmonella enterica

text: Monophasic variant of S. Typhimurium

text: last

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SSI

text: public

text: ANSES

characteristic: collection date

text: No

characteristic: environmental sample

text: France

characteristic: geographic location (latitude)

text: Other

characteristic: host scientific name

text: Yes

text: Salmonella enterica

text: Salmonella enterica

text: S. Typhimurium

text: last


characteristic: External Id

text: SSI

text: public

text: Denmark

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: isolate

text: not provided

characteristic: isolation source

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Adjame

characteristic: serovar

text: Danish outbreak strain


text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: DTU Bioinformatics

characteristic: broker name

text: DTU

text: No

text: Denmark

characteristic: geo loc name

text: Denmark

characteristic: geographic location (longitude)

text: not provided

text: Sus scrofa

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Animal

characteristic: isolation source host associated

text: Salmonella enterica

text: Salmonella enterica

text: Infantis

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DTU-GE

text: public

text: DTU Bioinformatics

text: DTU

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Denmark

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: not provided

characteristic: host health state

text: Sus scrofa

characteristic: host scientific name

text: Yes

text: Animal

text: Salmonella enterica

text: Salmonella enterica

text: Infantis


text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: DTU Bioinformatics

characteristic: broker name

text: DTU

text: No

text: Denmark

text: Denmark

text: not provided

text: Sus scrofa

text: Yes

characteristic: isolate

text: Animal

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Infantis


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Gdansk

text: public

tag: Namespace:University of Gdansk

text: Imago

characteristic: description

text: insect environmental sample

text: insect environmental sample

characteristic: title


text: University of Gdansk

text: public

text: Larva 1

text: insect environmental sample

text: insect environmental sample


text: University of Gdansk

text: public

text: Larva 2

text: insect environmental sample

text: insect environmental sample


text: public

tag: Namespace:Swiss Tropical and Public Health Institute

text: St. Francis Hospital in Ifakara

characteristic: collecting institution

characteristic: collection date

text: bloodstream form

characteristic: dev stage

text: Tanzania

characteristic: geographic location (country and/or sea)

text: homo sapiens

text: male

characteristic: host sex

text: patient 259/82

characteristic: host subject id

text: Trypanosoma brucei rhodesiense

text: Trypanosoma brucei rhodesiense

characteristic: strain

text: axenic clone of the T. b. rhodesiense strain STIB900


text: Swiss Tropical and Public Health Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: St. Francis Hospital in Ifakara

text: bloodstream form

text: Tanzania

text: homo sapiens

characteristic: host scientific name

text: male

text: patient 259/82

text: Trypanosoma brucei rhodesiense

text: Trypanosoma brucei rhodesiense

text: suramin resistant derivative of STIB900_c1


Compost L5/6A

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CREA-ORT

text: public

text: Compost L5/6A

text: Environmental material

characteristic: environment (biome)

text: Agricultural environmental material

characteristic: environment (feature)

text: Compost

characteristic: environment (material)

text: Italy

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: miscellaneous natural or artificial environment

characteristic: miscellaneous environmental package

text: compost metagenome

characteristic: organism

text: CarbOnFarm

characteristic: project name

text: compost metagenome

text: WGS

characteristic: sequencing method

text: Compost on farm


Compost L2A

text: CREA-ORT

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Compost L2A

characteristic: collection date

text: Environmental material

text: Agricultural environmental material

text: Compost

text: Italy

characteristic: geographic location (country and/or sea)

text: metagenome

text: compost metagenome

text: CarbOnFarm

text: compost metagenome

text: WGS

text: Compost on farm

characteristic: title


text: Salmonella typhi

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

characteristic: Submitter Id

text: Salmonella typhi

characteristic: common name

text: Salmonella enterica subsp. enterica serovar Typhi

characteristic: subject id


text: public

text: RS0141 Pristionchus uniformis transcriptome

characteristic: description

text: Pristionchus uniformis

characteristic: organism

text: Pristionchus uniformis


characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: RS5108 Pristionchus mariannae transcriptome

text: Pristionchus marianneae

text: Pristionchus marianneae


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: RS5140 Pristionchus americanus transcriptome

text: Pristionchus americanus

text: Pristionchus americanus


text: public

characteristic: SRA accession

text: RS5231 Pristionchus brevicauda transcriptome

text: Pristionchus brevicauda

text: Pristionchus brevicauda


text: public

text: RS5262 Pristionchus bolivae transcriptome

text: Pristionchus boliviae

text: Pristionchus boliviae


text: public

text: RS5284B Pristionchus clavus transcriptome

text: Pristionchus clavus

text: Pristionchus clavus


text: public

text: RS5595 Pristionchus fukushimae transcriptome

text: Pristionchus fukushimae

text: Pristionchus fukushimae


text: public

text: RS0144 Pristionchus entomophagus transcriptome

text: Pristionchus entomophagus

text: Pristionchus entomophagus


text: MAX PLANCK INSTITUTE FOR DEVELOPMENTAL BIOLOGY

text: public

text: RS5133 Pristionchus fissidentatus transcriptome

text: Pristionchus fissidentatus

text: Pristionchus fissidentatus


text: public

text: RS5228 Pristionchus japonicus transcriptome

text: Pristionchus japonicus

text: Pristionchus japonicus


text: public

text: RS5698 Pristionchus elegans transcriptome

text: Pristionchus elegans

text: Pristionchus elegans


text: public

text: RS5594 Pristionchus maxplancki transcriptome

text: Pristionchus maxplancki

text: Pristionchus maxplancki


text: public

tag: Namespace:UNIVERSITY OF COPENHAGEN, SECTION OF MICROBIOLOGY

text: Control period of vessel 3 (Ascending colon)- Repetition 1

text: gut metagenome

text: gut metagenome

text: V3C (1)


text: UNIVERSITY OF COPENHAGEN, SECTION OF MICROBIOLOGY

text: public

text: Control period of vessel 3 (Ascending colon)- Repetition 2

text: gut metagenome

text: gut metagenome

text: V3C (2)


text: public

text: Treatment with BB46 in vessel 3 (Ascending colon)- Repetition 1

text: gut metagenome

text: gut metagenome

text: V3T1 (1)


text: public

text: Treatment with BB46 in vessel 3 (Ascending colon)- Repetition 2

text: gut metagenome

text: gut metagenome

text: V3T1 (2)


text: public

text: Treatment with Pectin and BB46 in vessel 3 (Ascending colon)- Repetition 1

text: gut metagenome

text: gut metagenome

text: V3T2 (1)


text: public

text: Treatment with Pectin and BB46 in vessel 3 (Ascending colon)- Repetition 2

text: gut metagenome

text: gut metagenome

text: V3T2 (2)


text: public

text: Washout period of vessel 3 (Ascending colon)- Repetition 1

text: gut metagenome

text: gut metagenome

text: V3W (1)


text: public

text: Washout period of vessel 3 (Ascending colon)- Repetition 2

text: gut metagenome

text: gut metagenome

text: V3W (2)


text: public

text: Treatment with Pectin in vessel 3 (Ascending colon)- Repetition 1

text: gut metagenome

text: gut metagenome

text: V3T3 (1)


text: public

text: Treatment with Pectin in vessel 3 (Ascending colon)- Repetition 2

text: gut metagenome

text: gut metagenome

text: V3T3 (2)


text: public

text: Control period of vessel 4 (Transverse colon)- Repetition 1

text: gut metagenome

text: gut metagenome

text: V4C (1)


text: public

text: Control period of vessel 4 (Transverse colon)- Repetition 2

text: gut metagenome

text: gut metagenome

text: V4C (2)


text: public

text: Treatment with BB46 in vessel 4 (Transverse colon)- Repetition 1

text: gut metagenome

text: gut metagenome

text: V4T1 (1)


text: public

text: Treatment with BB46 in vessel 4 (Transverse colon)- Repetition 2

text: gut metagenome

text: gut metagenome

text: V4T1 (2)


text: public

text: Treatment with Pectin and BB46 in vessel 4 (Transverse colon)- Repetition 1

text: gut metagenome

text: gut metagenome

text: V4T2 (1)


text: public

text: Treatment with Pectin and BB46 in vessel 4 (Transverse colon)- Repetition 2

text: gut metagenome

text: gut metagenome

text: V4T2 (2)


text: public

text: Washout period of vessel 4 (Transverse colon)- Repetition 1

text: gut metagenome

text: gut metagenome

text: V4W (1)


text: UNIVERSITY OF COPENHAGEN, SECTION OF MICROBIOLOGY

text: public

text: Washout period of vessel 4 (Transverse colon)- Repetition 2

text: gut metagenome

text: gut metagenome

text: V4W (2)


text: public

text: Treatment with Pectin in vessel 4 (Transverse colon)- Repetition 1

text: gut metagenome

text: gut metagenome

text: V4T3 (1)


text: public

text: Treatment with Pectin in vessel 4 (Transverse colon)- Repetition 2

text: gut metagenome

text: gut metagenome

text: V4T3 (2)


text: public

text: Control period of vessel 5 (Descending colon)- Repetition 1

text: gut metagenome

text: gut metagenome

text: V5C (1)


text: public

text: Control period of vessel 5 (Descending colon)- Repetition 2

text: gut metagenome

text: gut metagenome

text: V5C (2)


text: public

text: Treatment with BB46 in vessel 5 (Descending colon)- Repetition 1

text: gut metagenome

text: gut metagenome

text: V5T1 (1)


text: public

text: Treatment with BB46 in vessel 5 (Descending colon)- Repetition 2

text: gut metagenome

text: gut metagenome

text: V5T1 (2)


text: public

text: Treatment with Pectin and BB46 in vessel 5 (Descending colon)- Repetition 1

text: gut metagenome

text: gut metagenome

text: V5T2 (1)


text: public

text: Treatment with Pectin and BB46 in vessel 5 (Descending colon)- Repetition 2

text: gut metagenome

text: gut metagenome

text: V5T2 (2)


text: public

text: Washout period of vessel 5 (Descending colon)- Repetition 1

text: gut metagenome

text: gut metagenome

text: V5W (1)


text: public

text: Washout period of vessel 5 (Descending colon)- Repetition 2

text: gut metagenome

text: gut metagenome

text: V5W (2)


text: public

text: Treatment with Pectin in vessel 5 (Descending colon)- Repetition 1

text: gut metagenome

text: gut metagenome

text: V5T3 (1)


text: public

text: Treatment with Pectin in vessel 5 (Descending colon)- Repetition 2

text: gut metagenome

text: gut metagenome

text: V5T3 (2)


text: UCL

text: public

characteristic: collection date

text: Tn-Seq of E. coli K1 A192PP Tn5 library

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: rat

characteristic: host scientific name

characteristic: isolate

text: E coli A192PP tn5 library

characteristic: isolation source

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli A192PP Tn5 library, sample 1