characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: GCTGGCGA

text: bulk soil

text: ITS amplicons

text: Yes

text: light

text: Philippines

text: C

text: metagenomes

text: metagenomes

text: GCTGGCGACTTGGTCATTTAGAGGAAGTAA

text: 21 d


status: PUBLIC

tag: attribute

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:INRES Molecular Biology of the Rhizosphere

characteristic: Submitter Id

characteristic: barcode

text: GCTGGCGA

characteristic: barcode sequence

text: bulk soil

characteristic: compartment

text: ITS amplicons

characteristic: description

text: Yes

characteristic: environmental sample

text: no fraction

characteristic: fraction

text: Philippines

characteristic: geographic location (country and/or sea)

text: D

text: metagenomes

characteristic: organism

text: metagenomes

text: GCTGGCGACTTGGTCATTTAGAGGAAGTAA

text: no straw

text: 35 d

characteristic: time

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: INRES Molecular Biology of the Rhizosphere

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: GTAGAGCT

text: bulk soil

text: ITS amplicons

text: Yes

text: heavy

text: Philippines

text: C

text: metagenomes

text: metagenomes

text: GTAGAGCTCTTGGTCATTTAGAGGAAGTAA

text: 21 d


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: GTAGAGCT

text: bulk soil

text: ITS amplicons

text: Yes

text: no fraction

text: Philippines

text: D

text: metagenomes

text: metagenomes

text: GTAGAGCTCTTGGTCATTTAGAGGAAGTAA

text: no straw

text: 35 d


text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: barcode

text: TACTGCGC

characteristic: barcode sequence

text: bulk soil

text: ITS amplicons

text: Yes

text: light

text: Philippines

text: C

text: metagenomes

text: metagenomes

text: TACTGCGCCTTGGTCATTTAGAGGAAGTAA

text: 21 d


text: public

text: TACTGCGC

text: rhizosphere

characteristic: compartment

text: ITS amplicons

characteristic: description

text: Yes

characteristic: environmental sample

text: no fraction

characteristic: fraction

text: Philippines

text: D

text: metagenomes

text: metagenomes

text: TACTGCGCCTTGGTCATTTAGAGGAAGTAA

text: no straw

text: 21 d


text: public

text: TCGCGTAC

text: bulk soil

text: ITS amplicons

text: Yes

text: heavy

text: Philippines

characteristic: geographic location (country and/or sea)

text: C

text: metagenomes

characteristic: organism

text: metagenomes

text: TCGCGTACCTTGGTCATTTAGAGGAAGTAA

text: 28 d

characteristic: time

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: TCGCGTAC

text: rhizosphere

text: ITS amplicons

text: Yes

text: no fraction

text: Philippines

text: D

text: metagenomes

text: metagenomes

text: TCGCGTACCTTGGTCATTTAGAGGAAGTAA

text: no straw

text: 21 d


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: TGTAGGTC

text: bulk soil

text: ITS amplicons

text: Yes

text: light

text: Philippines

text: C

text: metagenomes

text: metagenomes

text: TGTAGGTCCTTGGTCATTTAGAGGAAGTAA

text: 28 d


text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: barcode

text: TGTAGGTC

characteristic: barcode sequence

text: rhizosphere

text: ITS amplicons

text: Yes

text: no fraction

text: Philippines

text: D

text: metagenomes

text: metagenomes

text: TGTAGGTCCTTGGTCATTTAGAGGAAGTAA

text: no straw

text: 21 d


text: public

text: CACAGTTG

text: bulk soil

characteristic: compartment

text: ITS amplicons

characteristic: description

text: Yes

characteristic: environmental sample

text: light

characteristic: fraction

text: Philippines

text: C

text: metagenomes

text: metagenomes

text: CACAGTTGCTTGGTCATTTAGAGGAAGTAA

text: 0 d


text: public

text: CACAGTTG

text: bulk soil

text: ITS amplicons

text: Yes

text: light

text: Philippines

characteristic: geographic location (country and/or sea)

text: D

text: metagenomes

characteristic: organism

text: metagenomes

text: CACAGTTGCTTGGTCATTTAGAGGAAGTAA

text: 35 d

characteristic: time

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: AAGCGGTC

text: bulk soil

text: ITS amplicons

text: Yes

text: heavy

text: Philippines

text: C

text: metagenomes

text: metagenomes

text: AAGCGGTCCTTGGTCATTTAGAGGAAGTAA

text: 28 d


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: ACTCTAAG

text: bulk soil

text: ITS amplicons

text: Yes

text: light

text: Philippines

text: C

text: metagenomes

text: metagenomes

text: ACTCTAAGCTTGGTCATTTAGAGGAAGTAA

text: 28 d


text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: barcode

text: TGAGAGTG

characteristic: barcode sequence

text: bulk soil

text: ITS amplicons

text: Yes

text: heavy

text: Philippines

text: C

text: metagenomes

text: metagenomes

text: TGAGAGTGCTTGGTCATTTAGAGGAAGTAA

text: 28 d


text: public

text: TTCTGATG

text: bulk soil

characteristic: compartment

text: ITS amplicons

characteristic: description

text: Yes

characteristic: environmental sample

text: light

characteristic: fraction

text: Philippines

text: C

text: metagenomes

text: metagenomes

text: TTCTGATGCTTGGTCATTTAGAGGAAGTAA

text: 28 d


text: public

text: CCTACAAC

text: bulk soil

text: ITS amplicons

text: Yes

text: heavy

text: Philippines

characteristic: geographic location (country and/or sea)

text: C

text: metagenomes

characteristic: organism

text: metagenomes

text: CCTACAACCTTGGTCATTTAGAGGAAGTAA

text: 0 d

characteristic: time

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: CCTACAAC

text: bulk soil

text: ITS amplicons

text: Yes

text: heavy

text: Philippines

text: D

text: metagenomes

text: metagenomes

text: CCTACAACCTTGGTCATTTAGAGGAAGTAA

text: 35 d


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: CGTCGGCT

text: bulk soil

text: ITS amplicons

text: Yes

text: light

text: Philippines

text: C

text: metagenomes

text: metagenomes

text: CGTCGGCTCTTGGTCATTTAGAGGAAGTAA

text: 0 d


text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: barcode

text: CGTCGGCT

characteristic: barcode sequence

text: bulk soil

text: ITS amplicons

text: Yes

text: light

text: Philippines

text: D

text: metagenomes

text: metagenomes

text: CGTCGGCTCTTGGTCATTTAGAGGAAGTAA

text: 35 d


text: public

text: GACGTCAA

text: bulk soil

characteristic: compartment

text: ITS amplicons

characteristic: description

text: Yes

characteristic: environmental sample

text: heavy

characteristic: fraction

text: Philippines

text: C

text: metagenomes

text: metagenomes

text: GACGTCAACTTGGTCATTTAGAGGAAGTAA

text: 0 d


text: public

text: GACGTCAA

text: bulk soil

text: ITS amplicons

text: Yes

text: heavy

text: Philippines

characteristic: geographic location (country and/or sea)

text: D

text: metagenomes

characteristic: organism

text: metagenomes

text: GACGTCAACTTGGTCATTTAGAGGAAGTAA

text: 35 d

characteristic: time

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: GCGTTTCG

text: bulk soil

text: ITS amplicons

text: Yes

text: light

text: Philippines

text: C

text: metagenomes

text: metagenomes

text: GCGTTTCGCTTGGTCATTTAGAGGAAGTAA

text: 0 d


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: GCGTTTCG

text: bulk soil

text: ITS amplicons

text: Yes

text: light

text: Philippines

text: D

text: metagenomes

text: metagenomes

text: GCGTTTCGCTTGGTCATTTAGAGGAAGTAA

text: 35 d


text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: barcode

text: GGTCTGAC

characteristic: barcode sequence

text: bulk soil

text: ITS amplicons

text: Yes

text: heavy

text: Philippines

text: C

text: metagenomes

text: metagenomes

text: GGTCTGACCTTGGTCATTTAGAGGAAGTAA

text: 3 d


text: public

text: GGTCTGAC

text: bulk soil

characteristic: compartment

text: ITS amplicons

characteristic: description

text: Yes

characteristic: environmental sample

text: heavy

characteristic: fraction

text: Philippines

text: D

text: metagenomes

text: metagenomes

text: GGTCTGACCTTGGTCATTTAGAGGAAGTAA

text: 35 d


text: CNGB

text: public

characteristic: age

text: CNSA

characteristic: broker name

text: bitter melon

characteristic: common name

characteristic: cultivar

text: guangzhou,china

characteristic: geo loc name

text: Momordica charantia

characteristic: organism

text: Momordica charantia

text: leaf

characteristic: tissue


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CNGB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: log phase

text: CNSA

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: not determined

characteristic: sex

characteristic: strain

text: cells


text: CNGB

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: CNSA

characteristic: collection date

text: China:Nanchang

text: lobster sauces

characteristic: isolation source

text: Bacillus amyloliquefaciens

text: cell culture

characteristic: sample type

text: Bacillus amyloliquefaciens


text: URMITE

text: public

text: stool

text: Dorea sp. Marseille-P4003

characteristic: organism

text: Dorea sp. Marseille-P4003

text: Dorea phocaeensis genome

characteristic: title


characteristic: ENA-CHECKLIST

text: Maynooth University

text: public

tag: Namespace:Maynooth University

text: pig gut metagenome

text: pig gut metagenome

text: Pig faecal samples


characteristic: ENA-FIRST-PUBLIC

text: URMITE

text: public

text: stool

text: Halobacillus sp. Marseille-P3879

text: Halobacillus sp. Marseille-P3879

text: Halobacillus timonensis genome


characteristic: ENA-LAST-UPDATE

text: URMITE

text: public

text: vagina

text: Megasphaera sp. Marseille-P4857

text: Megasphaera sp. Marseille-P4857

text: Megasphaera vaginalis genome


characteristic: External Id

text: URMITE

text: public

text: stool

text: Ottowia sp. Marseille-P4747

text: Ottowia sp. Marseille-P4747

text: Ottowia massiliensis genome


text: synthetic construct

characteristic: ArrayExpress-SPECIES

text: SC

characteristic: INSDC center name

text: public

text: synthetic construct

characteristic: common name

text: synthetic construct

text: synthetic construct

characteristic: subject id


E-MTAB-6278:Sample 4

text: University of Cambridge

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-6278:Sample 4

tag: Namespace:University of Cambridge

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: house mouse

text: Protocols: Murine 17 clone 1 (17Cl-1) (Sturman and Takemoto, 1972) cells were maintained in Dulbecco’s modification of Eagle’s medium supplemented with 10% (vol/vol) fetal calf serum (FCS). Recombinant MHV strain A59 (MHV-A59) was derived as previously described (Coley et al., 2005). 17Cl-1 cells (10^7) were plated in 10 cm dishes and, upon reaching 70-80% confluence, were infected with MHV-A59 at a multiplicity of infection (MOI) of 10 PFU/cell in Hank’s balanced salt solution (HBSS) containing 50 mg/ml DEAE-dextran and 0.2% bovine serum albumin (BSA). After 45 min at 37 ºC, the inoculum was removed and the cells were incubated in DMEM containing 10% FCS, 100 U/ml penicillin and 100 mg/ml streptomycin at 37 ºC until harvest. At the appropriate time point, cells were flash frozen or treated with 1 X CHX (to 100 µg/ml; 2 min), or 100 X CHX (to 10,000 µg/ml; 2 min). Cell lysates were subjected to RiboSeq and RNASeq. The methodologies employed were based on the original protocols of Ingolia and colleagues (Ingolia et al., 2009; Ingolia et al., 2012), except library amplicons were constructed using a small RNA cloning strategy (Guo et al., 2010) adapted to Illumina smallRNA v2 to allow multiplexing.

characteristic: description

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 4


E-MTAB-6278:Sample 5

text: University of Cambridge

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6278:Sample 5

characteristic: Submitter Id

text: ArrayExpress

text: house mouse

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 5


E-MTAB-6278:Sample 6

text: University of Cambridge

text: public

text: E-MTAB-6278:Sample 6

text: ArrayExpress

text: house mouse

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Mus musculus

text: Sample 6

characteristic: title


E-MTAB-6278:Sample 8

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: University of Cambridge

text: public

text: E-MTAB-6278:Sample 8

text: ArrayExpress

text: house mouse

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 8


E-MTAB-6278:Sample 1

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Cambridge

text: public

text: E-MTAB-6278:Sample 1

text: ArrayExpress

text: house mouse

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 1


E-MTAB-6278:Sample 2

text: University of Cambridge

characteristic: INSDC center name

text: public

text: E-MTAB-6278:Sample 2

text: ArrayExpress

text: house mouse

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 2


E-MTAB-6278:Sample 3

text: University of Cambridge

text: public

text: E-MTAB-6278:Sample 3

text: ArrayExpress

text: house mouse

characteristic: common name

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 3


E-MTAB-6278:Sample 7

text: University of Cambridge

text: public

text: E-MTAB-6278:Sample 7

text: ArrayExpress

text: house mouse

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 7


text: Mus musculus

characteristic: ArrayExpress-SPECIES

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

characteristic: subject id


text: IFIK

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: no

characteristic: abdominal complaints

text: no

characteristic: antibiotic intake

text: non colonized

characteristic: colonization with extended-spectrum cephalosporin resistant enterobacteriaceae

text: native stool sample before travelling to India

text: human gut metagenome

text: human gut metagenome

text: before travelling to India

characteristic: time point

text: no

characteristic: travel to south and southeast asia


text: IFIK

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: no

text: no

text: non colonized

text: native stool sample after travelling to India

characteristic: description

text: human gut metagenome

characteristic: organism

text: human gut metagenome

text: after travelling to India

text: yes


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IFIK

text: public

text: no

text: no

text: non colonized

text: native stool sample 3 months after returning from travel to India

text: human gut metagenome

text: human gut metagenome

text: 3 months after travelling to India

characteristic: title

text: no


text: IFIK

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: no

text: no

text: non colonized

text: native stool sample 6 months after returning from travel to India

text: human gut metagenome

text: human gut metagenome

text: 6 months after travelling to India

text: no


text: IFIK

characteristic: INSDC last update

text: public

text: no

characteristic: abdominal complaints

text: no

text: non colonized

text: native stool sample 12 months after returning from travel to India

text: human gut metagenome

text: human gut metagenome

text: 12 months after travelling to India

text: no


text: IFIK

text: public

text: yes

text: no

characteristic: antibiotic intake

text: colonized

characteristic: colonization with extended-spectrum cephalosporin resistant enterobacteriaceae

text: human gut metagenome

text: human gut metagenome

text: after travelling to India

text: yes


text: IFIK

text: public

text: no

text: no

text: colonized

text: human gut metagenome

text: human gut metagenome

text: after travelling to India

characteristic: time point

text: yes

characteristic: travel to south and southeast asia


text: IFIK

text: public

characteristic: INSDC status

characteristic: SRA accession

text: no

text: no

text: colonized

text: human gut metagenome

text: human gut metagenome

text: 3 months after travelling to India

text: no


text: IFIK

text: public

characteristic: Submitter Id

text: yes

text: yes

text: non colonized

characteristic: description

text: human gut metagenome

text: human gut metagenome

text: after travelling to India

text: yes


characteristic: ENA-CHECKLIST

text: IFIK

text: public

text: yes

text: yes

text: non colonized

text: human gut metagenome

characteristic: organism

text: human gut metagenome

text: 3 months after travelling to India

text: no


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: IFIK

text: public

text: no

text: no

text: colonized

text: human gut metagenome

text: human gut metagenome

text: 6 months after travelling to India

text: no


characteristic: External Id

text: IFIK

text: public

text: no

text: no

text: colonized

text: human gut metagenome

text: human gut metagenome

text: before travelling to India

characteristic: title

text: no


text: IFIK

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: yes

text: no

text: non colonized

text: human gut metagenome

text: human gut metagenome

text: 6 months after travelling to India

text: no


text: IFIK

characteristic: INSDC last update

text: public

text: no

characteristic: abdominal complaints

text: no

text: colonized

text: human gut metagenome

text: human gut metagenome

text: 12 months after travelling to India

text: no


text: IFIK

text: public

text: yes

text: no

characteristic: antibiotic intake

text: colonized

characteristic: colonization with extended-spectrum cephalosporin resistant enterobacteriaceae

text: human gut metagenome

text: human gut metagenome

text: 6 months after travelling to India

text: yes


text: IFIK

text: public

text: no

text: yes

text: non colonized

text: human gut metagenome

text: human gut metagenome

text: before travelling to India

characteristic: time point

text: no

characteristic: travel to south and southeast asia


text: IFIK

text: public

characteristic: INSDC status

characteristic: SRA accession

text: yes

text: yes

text: non colonized

text: human gut metagenome

text: human gut metagenome

text: before travelling to India

text: no


text: IFIK

text: public

characteristic: Submitter Id

text: no

text: no

text: non colonized

characteristic: description

text: human gut metagenome

text: human gut metagenome

text: before travelling to India

text: no


characteristic: ENA-CHECKLIST

text: IFIK

text: public

text: no

text: no

text: non colonized

text: human gut metagenome

characteristic: organism

text: human gut metagenome

text: after travelling to India

text: yes


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: IFIK

text: public

text: no

text: no

text: non colonized

text: human gut metagenome

text: human gut metagenome

text: 3 months after travelling to India

text: no


characteristic: External Id

text: IFIK

text: public

text: yes

text: no

text: colonized

text: human gut metagenome

text: human gut metagenome

text: 3 months after travelling to India

characteristic: title

text: yes


text: IFIK

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: no

text: no

text: non colonized

text: human gut metagenome

text: human gut metagenome

text: 6 months after travelling to India

text: no


text: IFIK

characteristic: INSDC last update

text: public

text: no

characteristic: abdominal complaints

text: no

text: non colonized

text: human gut metagenome

text: human gut metagenome

text: 12 months after travelling to India

text: no


text: IFIK

text: public

text: yes

text: no

characteristic: antibiotic intake

text: colonized

characteristic: colonization with extended-spectrum cephalosporin resistant enterobacteriaceae

text: human gut metagenome

text: human gut metagenome

text: after travelling to India

text: yes


text: IFIK

text: public

text: no

text: no

text: colonized

text: human gut metagenome

text: human gut metagenome

text: 3 months after travelling to India

characteristic: time point

text: no

characteristic: travel to south and southeast asia


text: IFIK

text: public

characteristic: INSDC status

characteristic: SRA accession

text: no

text: no

text: colonized

text: human gut metagenome

text: human gut metagenome

text: after travelling to India

text: yes


text: public

tag: Namespace:IZSLT (Istituto Zooprofilattico Sperimentale del Lazio e la Toscana)

characteristic: Submitter Id

text: IZSLT

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Italy

characteristic: geo loc name

text: Italy

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: not provided

characteristic: host health state

text: Sus scrofa

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: fattening pig

characteristic: isolation source host associated

text: Salmonella enterica

text: Salmonella enterica

text: typhimurium monophasic

characteristic: serovar

characteristic: strain

type: has member


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IZSLT (Istituto Zooprofilattico Sperimentale del Lazio e la Toscana)

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: IZSLT

text: No

text: Italy

text: Italy

text: not provided

text: Sus scrofa

text: Yes

text: Caecum, Pigs

text: Escherichia coli

characteristic: organism

text: Escherichia coli


text: public

characteristic: SRA accession

characteristic: Submitter Id

text: IZSLT

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Italy

characteristic: geo loc name

text: Italy

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: not provided

text: Meleagris gallopavo

text: Yes

text: fattening flock

text: Salmonella enterica

text: Salmonella enterica

text: Typhimurium


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: IZSLT

text: No

text: Italy

text: Italy

text: not provided

characteristic: host health state

text: Meleagris gallopavo

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: caecum turkey

characteristic: isolation source host associated

text: Escherichia coli

text: Escherichia coli

characteristic: strain


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: IZSLT

text: No

text: Italy

text: Italy

text: not provided

text: Sus scrofa

text: Yes

text: meat from pig

text: Escherichia coli

characteristic: organism

text: Escherichia coli


text: public

tag: Namespace:LONDON SCHOOL OF HYGIENE AND TROPICAL MEDICINE

characteristic: Submitter Id

text: Trypanosoma brucei brucei

text: Trypanosoma brucei brucei

text: Identification of Trypanosoma brucei human serum sensitivity determinants by RNAi library selection

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: LONDON SCHOOL OF HYGIENE AND TROPICAL MEDICINE

text: public

text: T. b. brucei RNAi library selected in human recombinant apoL1

characteristic: description

text: Trypanosoma brucei brucei

text: Trypanosoma brucei brucei

text: Identification of Trypanosoma brucei apolipoprotein-L1 sensitivity determinants by RNAi library selection


text: public

text: T. b. brucei RNAi library selected in Papio papio (baboon) recombinant apoL1

text: Trypanosoma brucei brucei

text: Trypanosoma brucei brucei


text: WDRC KAUST

text: public

tag: Namespace:WDRC KAUST

text: Giantommaso Scarascia

characteristic: collected by

text: Thuwal, Saudi Arabia

characteristic: geographic location (region and locality)

text: Pseudomonas aeruginosa enriched seawater biofilm

characteristic: isolation source

text: seawater metagenome

text: seawater metagenome

text: Pseudomonas enriched seawater biofilm


text: URMITE

text: public

text: stool

text: Peptostreptococcus sp. Marseille-P4308

text: Peptostreptococcus sp. Marseille-P4308

characteristic: strain

text: Peptostreptococcus syus genome


characteristic: ENA-LAST-UPDATE

text: INRA-META

text: public

text: Below

characteristic: PFS 3 months

text: Below

characteristic: PFS 6 month

text: no

characteristic: antibiotics

text: discovery

characteristic: cohort

characteristic: collection date

text: Sample for study described in Gut mictobiota composition correlation with the clinical outcome of NSCLC and RCC patients treated with anti-PD-1 mAB

text: city

characteristic: environment (biome)

text: human-associated habitat

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

unit: year

characteristic: host age

text: NSCLC

characteristic: host disease status

text: female

characteristic: host sex

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

characteristic: patient id

text: Gut microbiota composition correlation with the clinical outcome of NSCLC and RCC patients treated with anti-PD-1 mAB

characteristic: project name

text: Progression

characteristic: response

text: human gut metagenome

text: Ion-Proton

characteristic: sequencing method

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text: human gut metagenome


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characteristic: ENA-FIRST-PUBLIC

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characteristic: PFS 6 month

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text: yes

characteristic: antibiotics

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text: city

text: human-associated habitat

text: feces

text: France

text: NSCLC

text: female

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text: metagenome

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text: Ion-Proton

text: human gut metagenome

characteristic: title


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text: Above

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text: discovery

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characteristic: environment (biome)

text: human-associated habitat

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text: feces

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: NSCLC

characteristic: host disease status

text: female

characteristic: host sex

text: human-gut

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text: metagenome

characteristic: investigation type

text: human gut metagenome

characteristic: patient id

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text: Partial response

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characteristic: sequencing method

characteristic: timepoint

text: human gut metagenome


characteristic: ENA-CHECKLIST

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characteristic: External Id

text: INRA-META

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text: yes

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text: city

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text: no

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text: human-associated habitat

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text: feces

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

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text: NSCLC

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text: human gut metagenome

characteristic: title


characteristic: ENA-CHECKLIST

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text: INRA-META

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text: Not determined

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text: no

text: discovery

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characteristic: environment (biome)

text: human-associated habitat

characteristic: environment (feature)

text: feces

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text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

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text: INRA-META

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text: public

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characteristic: PFS 6 month

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text: yes

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text: Ion-Proton

text: human gut metagenome

characteristic: title


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text: INRA-META

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text: Below

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text: human-associated habitat

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: NSCLC

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text: male

characteristic: host sex

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text: human gut metagenome

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text: feces

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text: France

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text: human gut metagenome


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characteristic: title


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