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characteristic: common name

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text: Recq4a Recq4b Hei10

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text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

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text: Arabidopsis thaliana

text: Sample 235


E-MTAB-5949:Sample 236

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text: E-MTAB-5949:Sample 236

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text: Protocols: Arabidopsis thaliana rosette leaves collected from 5-week-old plants and frozen (-20 degres celsius) Arabidopsis thaliana grown under long day conditions (16 hr light) and 20 degrees Celcius. Genotypes: HEI10 overexpression line - HEI10 was amplified from Col or Ler genomic DNA using primers HEI10-XbaI and HEI10-BamHI (Supplemental Table S29). Amplification products were cloned into the pGREEN-0029 binary vector using XbaI and BamHI restriction enzymes. Promoter swap constructs were generated using XbaI/PacI digestion and vector religation. These vectors were transformed into Col-420 FTL hemizygous plants using Agrobacterium strain GV3101 and floral dipping (text taken from doi: 10.1101/gad.295501.116 Ziolkowski et al, 2017) and loss of function recq4a recq4b mutant lines recq4a-4 (N419423) recq4b-2 (N511130) (mutation described in paper: doi: 10.1073/pnas.0705998104 reference. Text taken from doi: 10.1073/pnas.1423107112 Seguela-Arnaud et al, 2015) Standard CTAB DNA extraction. DNA was extracted using CTAB and used to generate sequencing libraries as described (Rowan et al. 2015; Yelina et al. 2015) with the following modifications. DNA was extracted from three rosette leaves of 5-wk-old plants, and 150 ng of DNA was used as input for each library. DNA was sheared for 20 min at 37°C with 0.4 U of DNA Shearase (Zymo research). Each set of 96 libraries was sequenced on one lane of an Illumina NextSeq500 instrument (300-cycle Mid Output run). Text taken from: doi: 10.1101/gad.295501.116 TruSeq DNA sample prep kit. Illumina sequencing: DNA was extracted from three rosette leaves of 5-wk-old plants, and 150 ng of DNA was used as input for each library. DNA was sheared for 20 min at 37°C with 0.4 U of DNA Shearase (Zymo research). Each set of 96 libraries was sequenced on one lane of an Illumina NextSeq500 instrument (300-cycle Mid Output run). (text taken from doi: 10.1101/gad.295501.116 Ziolkowski et al, 2017)

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E-MTAB-5949:Sample 242

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E-MTAB-5949:Sample 250

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E-MTAB-5949:Sample 255

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E-MTAB-5949:Sample 258

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E-MTAB-5949:Sample 259

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E-MTAB-5949:Sample 266

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E-MTAB-5949:Sample 270

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E-MTAB-5949:Sample 271

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E-MTAB-5949:Sample 274

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E-MTAB-5949:Sample 275

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E-MTAB-5949:Sample 277

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E-MTAB-5949:Sample 278

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text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 278

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

characteristic: growth condition

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 278


E-MTAB-5949:Sample 279

text: Bioinfromatician, Postdoc

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5949:Sample 279

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 279


E-MTAB-5949:Sample 280

text: Bioinfromatician, Postdoc

text: public

characteristic: SRA accession

text: E-MTAB-5949:Sample 280

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: phenotype

text: Arabidopsis thaliana

text: Sample 280


E-MTAB-5949:Sample 281

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 281

text: ArrayExpress

text: thale cress

characteristic: common name

characteristic: description

text: Col-0 x Ler-0 F2

characteristic: ecotype

text: Recq4a Recq4b Hei10

characteristic: genotype

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 281

characteristic: title


E-MTAB-5949:Sample 282

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 282

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: organism part

text: Arabidopsis thaliana

text: Sample 282


E-MTAB-5949:Sample 283

text: Bioinfromatician, Postdoc

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5949:Sample 283

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

characteristic: growth condition

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 283


E-MTAB-5949:Sample 284

text: Bioinfromatician, Postdoc

text: public

characteristic: SRA accession

text: E-MTAB-5949:Sample 284

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 284


E-MTAB-5949:Sample 285

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 285

text: ArrayExpress

text: thale cress

characteristic: common name

characteristic: description

text: Col-0 x Ler-0 F2

characteristic: ecotype

text: Recq4a Recq4b Hei10

characteristic: genotype

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: phenotype

text: Arabidopsis thaliana

text: Sample 285


E-MTAB-5949:Sample 286

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 286

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 286

characteristic: title


E-MTAB-5949:Sample 287

text: Bioinfromatician, Postdoc

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5949:Sample 287

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: organism part

text: Arabidopsis thaliana

text: Sample 287


E-MTAB-5949:Sample 288

text: Bioinfromatician, Postdoc

text: public

characteristic: SRA accession

text: E-MTAB-5949:Sample 288

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

characteristic: growth condition

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 288


E-MTAB-5949:Sample 289

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 289

text: ArrayExpress

text: thale cress

characteristic: common name

characteristic: description

text: Col-0 x Ler-0 F2

characteristic: ecotype

text: Recq4a Recq4b Hei10

characteristic: genotype

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 289


E-MTAB-5949:Sample 290

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 290

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: phenotype

text: Arabidopsis thaliana

text: Sample 290


E-MTAB-5949:Sample 291

text: Bioinfromatician, Postdoc

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5949:Sample 291

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 291

characteristic: title


E-MTAB-5949:Sample 292

text: Bioinfromatician, Postdoc

text: public

characteristic: SRA accession

text: E-MTAB-5949:Sample 292

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: organism part

text: Arabidopsis thaliana

text: Sample 292


E-MTAB-5949:Sample 293

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 293

text: ArrayExpress

text: thale cress

characteristic: common name

characteristic: description

text: Col-0 x Ler-0 F2

characteristic: ecotype

text: Recq4a Recq4b Hei10

characteristic: genotype

text: 16 hours light at 20 degrees celsius

characteristic: growth condition

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 293


E-MTAB-5949:Sample 294

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 294

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 294


E-MTAB-5949:Sample 295

text: Bioinfromatician, Postdoc

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5949:Sample 295

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: phenotype

text: Arabidopsis thaliana

text: Sample 295


E-MTAB-5949:Sample 296

text: Bioinfromatician, Postdoc

text: public

characteristic: SRA accession

text: E-MTAB-5949:Sample 296

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 296

characteristic: title


E-MTAB-5949:Sample 297

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 297

text: ArrayExpress

text: thale cress

characteristic: common name

characteristic: description

text: Col-0 x Ler-0 F2

characteristic: ecotype

text: Recq4a Recq4b Hei10

characteristic: genotype

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: organism part

text: Arabidopsis thaliana

text: Sample 297


E-MTAB-5949:Sample 298

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 298

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

characteristic: growth condition

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 298


E-MTAB-5949:Sample 299

text: Bioinfromatician, Postdoc

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5949:Sample 299

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 299


E-MTAB-5949:Sample 300

text: Bioinfromatician, Postdoc

text: public

characteristic: SRA accession

text: E-MTAB-5949:Sample 300

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: phenotype

text: Arabidopsis thaliana

text: Sample 300


E-MTAB-5949:Sample 301

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 301

text: ArrayExpress

text: thale cress

characteristic: common name

characteristic: description

text: Col-0 x Ler-0 F2

characteristic: ecotype

text: Recq4a Recq4b Hei10

characteristic: genotype

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 301

characteristic: title


E-MTAB-5949:Sample 302

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 302

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: organism part

text: Arabidopsis thaliana

text: Sample 302


E-MTAB-5949:Sample 303

text: Bioinfromatician, Postdoc

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5949:Sample 303

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

characteristic: growth condition

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 303


E-MTAB-5949:Sample 304

text: Bioinfromatician, Postdoc

text: public

characteristic: SRA accession

text: E-MTAB-5949:Sample 304

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 304


E-MTAB-5949:Sample 305

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 305

text: ArrayExpress

text: thale cress

characteristic: common name

characteristic: description

text: Col-0 x Ler-0 F2

characteristic: ecotype

text: Recq4a Recq4b Hei10

characteristic: genotype

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: phenotype

text: Arabidopsis thaliana

text: Sample 305


E-MTAB-5949:Sample 306

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 306

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 306

characteristic: title


E-MTAB-5949:Sample 307

text: Bioinfromatician, Postdoc

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5949:Sample 307

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: organism part

text: Arabidopsis thaliana

text: Sample 307


E-MTAB-5949:Sample 308

text: Bioinfromatician, Postdoc

text: public

characteristic: SRA accession

text: E-MTAB-5949:Sample 308

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

characteristic: growth condition

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 308


E-MTAB-5949:Sample 309

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 309

text: ArrayExpress

text: thale cress

characteristic: common name

characteristic: description

text: Col-0 x Ler-0 F2

characteristic: ecotype

text: Recq4a Recq4b Hei10

characteristic: genotype

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 309


E-MTAB-5949:Sample 310

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 310

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: phenotype

text: Arabidopsis thaliana

text: Sample 310


E-MTAB-5949:Sample 311

text: Bioinfromatician, Postdoc

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5949:Sample 311

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 311

characteristic: title


E-MTAB-5949:Sample 312

text: Bioinfromatician, Postdoc

text: public

characteristic: SRA accession

text: E-MTAB-5949:Sample 312

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: organism part

text: Arabidopsis thaliana

text: Sample 312


E-MTAB-5949:Sample 313

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 313

text: ArrayExpress

text: thale cress

characteristic: common name

characteristic: description

text: Col-0 x Ler-0 F2

characteristic: ecotype

text: Recq4a Recq4b Hei10

characteristic: genotype

text: 16 hours light at 20 degrees celsius

characteristic: growth condition

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 313


E-MTAB-5949:Sample 314

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 314

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 314


E-MTAB-5949:Sample 315

text: Bioinfromatician, Postdoc

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5949:Sample 315

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: phenotype

text: Arabidopsis thaliana

text: Sample 315


E-MTAB-5949:Sample 316

text: Bioinfromatician, Postdoc

text: public

characteristic: SRA accession

text: E-MTAB-5949:Sample 316

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 316

characteristic: title


E-MTAB-5949:Sample 317

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 317

text: ArrayExpress

text: thale cress

characteristic: common name

characteristic: description

text: Col-0 x Ler-0 F2

characteristic: ecotype

text: Recq4a Recq4b Hei10

characteristic: genotype

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: organism part

text: Arabidopsis thaliana

text: Sample 317


E-MTAB-5949:Sample 318

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 318

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

characteristic: growth condition

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 318


E-MTAB-5949:Sample 319

text: Bioinfromatician, Postdoc

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5949:Sample 319

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 319


E-MTAB-5949:Sample 320

text: Bioinfromatician, Postdoc

text: public

characteristic: SRA accession

text: E-MTAB-5949:Sample 320

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: phenotype

text: Arabidopsis thaliana

text: Sample 320


E-MTAB-5949:Sample 321

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 321

text: ArrayExpress

text: thale cress

characteristic: common name

characteristic: description

text: Col-0 x Ler-0 F2

characteristic: ecotype

text: Recq4a Recq4b Hei10

characteristic: genotype

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 321

characteristic: title


E-MTAB-5949:Sample 322

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 322

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: organism part

text: Arabidopsis thaliana

text: Sample 322


E-MTAB-5949:Sample 323

text: Bioinfromatician, Postdoc

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5949:Sample 323

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

characteristic: growth condition

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 323


E-MTAB-5949:Sample 324

text: Bioinfromatician, Postdoc

text: public

characteristic: SRA accession

text: E-MTAB-5949:Sample 324

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 324


E-MTAB-5949:Sample 325

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 325

text: ArrayExpress

text: thale cress

characteristic: common name

characteristic: description

text: Col-0 x Ler-0 F2

characteristic: ecotype

text: Recq4a Recq4b Hei10

characteristic: genotype

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: phenotype

text: Arabidopsis thaliana

text: Sample 325


E-MTAB-5949:Sample 326

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 326

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 326

characteristic: title


E-MTAB-5949:Sample 327

text: Bioinfromatician, Postdoc

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5949:Sample 327

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: organism part

text: Arabidopsis thaliana

text: Sample 327


E-MTAB-5949:Sample 328

text: Bioinfromatician, Postdoc

text: public

characteristic: SRA accession

text: E-MTAB-5949:Sample 328

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

characteristic: growth condition

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 328


E-MTAB-5949:Sample 329

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 329

text: ArrayExpress

text: thale cress

characteristic: common name

characteristic: description

text: Col-0 x Ler-0 F2

characteristic: ecotype

text: Recq4a Recq4b Hei10

characteristic: genotype

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 329


E-MTAB-5949:Sample 330

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 330

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: phenotype

text: Arabidopsis thaliana

text: Sample 330


E-MTAB-5949:Sample 331

text: Bioinfromatician, Postdoc

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5949:Sample 331

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 331

characteristic: title


E-MTAB-5949:Sample 332

text: Bioinfromatician, Postdoc

text: public

characteristic: SRA accession

text: E-MTAB-5949:Sample 332

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: organism part

text: Arabidopsis thaliana

text: Sample 332


E-MTAB-5949:Sample 333

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 333

text: ArrayExpress

text: thale cress

characteristic: common name

characteristic: description

text: Col-0 x Ler-0 F2

characteristic: ecotype

text: Recq4a Recq4b Hei10

characteristic: genotype

text: 16 hours light at 20 degrees celsius

characteristic: growth condition

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 333


E-MTAB-5949:Sample 334

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 334

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 334


E-MTAB-5949:Sample 335

text: Bioinfromatician, Postdoc

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5949:Sample 335

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: phenotype

text: Arabidopsis thaliana

text: Sample 335


E-MTAB-5949:Sample 336

text: Bioinfromatician, Postdoc

text: public

characteristic: SRA accession

text: E-MTAB-5949:Sample 336

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 336

characteristic: title


E-MTAB-5949:Sample 337

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 337

text: ArrayExpress

text: thale cress

characteristic: common name

characteristic: description

text: Col-0 x Ler-0 F2

characteristic: ecotype

text: Recq4a Recq4b Hei10

characteristic: genotype

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: organism part

text: Arabidopsis thaliana

text: Sample 337


E-MTAB-5949:Sample 338

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 338

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

characteristic: growth condition

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 338


E-MTAB-5949:Sample 339

text: Bioinfromatician, Postdoc

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5949:Sample 339

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 339


E-MTAB-5949:Sample 340

text: Bioinfromatician, Postdoc

text: public

characteristic: SRA accession

text: E-MTAB-5949:Sample 340

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: phenotype

text: Arabidopsis thaliana

text: Sample 340


E-MTAB-5949:Sample 341

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 341

text: ArrayExpress

text: thale cress

characteristic: common name

characteristic: description

text: Col-0 x Ler-0 F2

characteristic: ecotype

text: Recq4a Recq4b Hei10

characteristic: genotype

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 341

characteristic: title


E-MTAB-5949:Sample 342

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 342

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: organism part

text: Arabidopsis thaliana

text: Sample 342


E-MTAB-5949:Sample 343

text: Bioinfromatician, Postdoc

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5949:Sample 343

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

characteristic: growth condition

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 343


E-MTAB-5949:Sample 344

text: Bioinfromatician, Postdoc

text: public

characteristic: SRA accession

text: E-MTAB-5949:Sample 344

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 344


E-MTAB-5949:Sample 345

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 345

text: ArrayExpress

text: thale cress

characteristic: common name

characteristic: description

text: Col-0 x Ler-0 F2

characteristic: ecotype

text: Recq4a Recq4b Hei10

characteristic: genotype

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: phenotype

text: Arabidopsis thaliana

text: Sample 345


E-MTAB-5949:Sample 346

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 346

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 346

characteristic: title


E-MTAB-5949:Sample 347

text: Bioinfromatician, Postdoc

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5949:Sample 347

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: organism part

text: Arabidopsis thaliana

text: Sample 347


E-MTAB-5949:Sample 348

text: Bioinfromatician, Postdoc

text: public

characteristic: SRA accession

text: E-MTAB-5949:Sample 348

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

characteristic: growth condition

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 348


E-MTAB-5949:Sample 349

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 349

text: ArrayExpress

text: thale cress

characteristic: common name

characteristic: description

text: Col-0 x Ler-0 F2

characteristic: ecotype

text: Recq4a Recq4b Hei10

characteristic: genotype

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 349


E-MTAB-5949:Sample 350

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 350

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: phenotype

text: Arabidopsis thaliana

text: Sample 350


E-MTAB-5949:Sample 351

text: Bioinfromatician, Postdoc

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5949:Sample 351

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 351

characteristic: title


E-MTAB-5949:Sample 352

text: Bioinfromatician, Postdoc

text: public

characteristic: SRA accession

text: E-MTAB-5949:Sample 352

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: organism part

text: Arabidopsis thaliana

text: Sample 352


E-MTAB-5949:Sample 353

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 353

text: ArrayExpress

text: thale cress

characteristic: common name

characteristic: description

text: Col-0 x Ler-0 F2

characteristic: ecotype

text: Recq4a Recq4b Hei10

characteristic: genotype

text: 16 hours light at 20 degrees celsius

characteristic: growth condition

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 353


E-MTAB-5949:Sample 354

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 354

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 354


E-MTAB-5949:Sample 355

text: Bioinfromatician, Postdoc

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5949:Sample 355

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: phenotype

text: Arabidopsis thaliana

text: Sample 355


E-MTAB-5949:Sample 356

text: Bioinfromatician, Postdoc

text: public

characteristic: SRA accession

text: E-MTAB-5949:Sample 356

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 356

characteristic: title


E-MTAB-5949:Sample 357

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 357

text: ArrayExpress

text: thale cress

characteristic: common name

characteristic: description

text: Col-0 x Ler-0 F2

characteristic: ecotype

text: Recq4a Recq4b Hei10

characteristic: genotype

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: organism part

text: Arabidopsis thaliana

text: Sample 357


E-MTAB-5949:Sample 358

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 358

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

characteristic: growth condition

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 358


E-MTAB-5949:Sample 359

text: Bioinfromatician, Postdoc

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5949:Sample 359

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 359


E-MTAB-5949:Sample 360

text: Bioinfromatician, Postdoc

text: public

characteristic: SRA accession

text: E-MTAB-5949:Sample 360

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: phenotype

text: Arabidopsis thaliana

text: Sample 360


E-MTAB-5949:Sample 361

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 361

text: ArrayExpress

text: thale cress

characteristic: common name

characteristic: description

text: Col-0 x Ler-0 F2

characteristic: ecotype

text: Recq4a Recq4b Hei10

characteristic: genotype

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 361

characteristic: title


E-MTAB-5949:Sample 362

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 362

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: organism part

text: Arabidopsis thaliana

text: Sample 362


E-MTAB-5949:Sample 363

text: Bioinfromatician, Postdoc

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5949:Sample 363

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

characteristic: growth condition

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 363


E-MTAB-5949:Sample 364

text: Bioinfromatician, Postdoc

text: public

characteristic: SRA accession

text: E-MTAB-5949:Sample 364

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 364


E-MTAB-5949:Sample 365

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 365

text: ArrayExpress

text: thale cress

characteristic: common name

characteristic: description

text: Col-0 x Ler-0 F2

characteristic: ecotype

text: Recq4a Recq4b Hei10

characteristic: genotype

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: phenotype

text: Arabidopsis thaliana

text: Sample 365


E-MTAB-5949:Sample 366

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 366

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 366

characteristic: title


E-MTAB-5949:Sample 367

text: Bioinfromatician, Postdoc

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5949:Sample 367

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: organism part

text: Arabidopsis thaliana

text: Sample 367


E-MTAB-5949:Sample 368

text: Bioinfromatician, Postdoc

text: public

characteristic: SRA accession

text: E-MTAB-5949:Sample 368

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

characteristic: growth condition

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 368


E-MTAB-5949:Sample 369

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 369

text: ArrayExpress

text: thale cress

characteristic: common name

characteristic: description

text: Col-0 x Ler-0 F2

characteristic: ecotype

text: Recq4a Recq4b Hei10

characteristic: genotype

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 369


E-MTAB-5949:Sample 370

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 370

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: phenotype

text: Arabidopsis thaliana

text: Sample 370


E-MTAB-5949:Sample 371

text: Bioinfromatician, Postdoc

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5949:Sample 371

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 371

characteristic: title


E-MTAB-5949:Sample 372

text: Bioinfromatician, Postdoc

text: public

characteristic: SRA accession

text: E-MTAB-5949:Sample 372

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: organism part

text: Arabidopsis thaliana

text: Sample 372


E-MTAB-5949:Sample 373

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 373

text: ArrayExpress

text: thale cress

characteristic: common name

characteristic: description

text: Col-0 x Ler-0 F2

characteristic: ecotype

text: Recq4a Recq4b Hei10

characteristic: genotype

text: 16 hours light at 20 degrees celsius

characteristic: growth condition

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 373


text: Homo sapiens

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

characteristic: subject id


E-MTAB-5949:Sample 374

text: Bioinfromatician, Postdoc

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-5949:Sample 374

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: phenotype

text: Arabidopsis thaliana

text: Sample 374

characteristic: title


E-MTAB-5949:Sample 375

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 375

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

characteristic: common name

characteristic: description

text: Col-0 x Ler-0 F2

characteristic: ecotype

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: organism part

text: Arabidopsis thaliana

text: Sample 375


E-MTAB-5949:Sample 376

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 376

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

characteristic: genotype

text: 16 hours light at 20 degrees celsius

characteristic: growth condition

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 376


E-MTAB-5949:Sample 377

text: Bioinfromatician, Postdoc

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5949:Sample 377

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 377


E-MTAB-5949:Sample 378

text: Bioinfromatician, Postdoc

text: public

characteristic: SRA accession

text: E-MTAB-5949:Sample 378

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: phenotype

text: Arabidopsis thaliana

text: Sample 378

characteristic: title


E-MTAB-5949:Sample 379

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 379

text: ArrayExpress

characteristic: broker name

text: thale cress

characteristic: common name

characteristic: description

text: Col-0 x Ler-0 F2

characteristic: ecotype

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: organism part

text: Arabidopsis thaliana

text: Sample 379


E-MTAB-5949:Sample 380

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 380

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

characteristic: genotype

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 380


E-MTAB-5949:Sample 381

text: Bioinfromatician, Postdoc

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-5949:Sample 381

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

characteristic: growth condition

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 381


E-MTAB-5949:Sample 382

text: Bioinfromatician, Postdoc

text: public

characteristic: SRA accession

text: E-MTAB-5949:Sample 382

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: rosette leaf

characteristic: phenotype

text: Arabidopsis thaliana

text: Sample 382


E-MTAB-5949:Sample 383

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 383

text: ArrayExpress

characteristic: broker name

text: thale cress

characteristic: common name

characteristic: description

text: Col-0 x Ler-0 F2

characteristic: ecotype

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

text: Arabidopsis thaliana

text: Sample 383

characteristic: title


E-MTAB-5949:Sample 384

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Bioinfromatician, Postdoc

text: public

text: E-MTAB-5949:Sample 384

text: ArrayExpress

text: thale cress

text: Col-0 x Ler-0 F2

text: Recq4a Recq4b Hei10

text: 16 hours light at 20 degrees celsius

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette leaf

characteristic: organism part

text: Arabidopsis thaliana

text: Sample 384


text: Mus Musculus

characteristic: ArrayExpress-SPECIES

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: house mouse

text: Mus musculus

text: Mus musculus

characteristic: subject id


text: UNIBE-IG

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: dog

text: Canis lupus familiaris

characteristic: organism

text: Canis lupus familiaris

text: Greyhound


ARIC

text: IMPERIAL COLLEGE LONDON

text: public

text: ARIC

tag: Namespace:IMPERIAL COLLEGE LONDON

text: Adineta ricciae

text: Adineta ricciae

text: Adineta ricciae genome sample


text: RWTH Aachen University

text: public

tag: Namespace:RWTH Aachen University

text: Conidia

characteristic: cell type

text: Golden Promise

characteristic: cultivar

text: Blumeria graminis f.sp. hordei isolate DH14

characteristic: description

text: Hordeum vulgare

characteristic: host scientific name

text: Infected barley leaves

characteristic: isolation source

characteristic: mating type

text: Blumeria graminis f. sp. hordei DH14

text: Blumeria graminis f. sp. hordei DH14

text: Blumeria graminis f.sp. hordei


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

tag: Namespace:1. The Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark 2. Industrial Microbiology Section, Department of Biotechnology, Delft University of Technology

text: ArrayExpress

characteristic: broker name

text: baker's yeast

characteristic: common name

text: Protocols: E. coli DH5α was used for cloning procedures. The fragments used for overexpression of genes were amplified by PCR using primers and templates as described in the Tables S1 and S2 as described in (Rodriguez et al., 2017). The fragments were amplified from the genomic DNA of S. cerevisiae CEN.PK102-5B (MATa ura3-52 his3Δ1 leu2-3/112 MAL2-8c SUC2) and E. coli NST 74. The gene encoding tyrosine ammonia-lyase from Flavobacterium johnsoniae (FjTAL) was as described in (Rodriguez et al., 2015). The amplified gene-encoding fragments were cloned together with strong constitutive promoters into EasyClone integrative plasmids by USER cloning (Jensen et al., 2014). The clones were tested for correct insertion of gene/promoter fragments by colony PCR using the primers summarized in the Table S1 and the resulting plasmids were verified by sequencing. The list of the constructed vectors can be found in Table 1 as described in Rodriguez et al., (2017). S. cerevisiae CEN.PK113-7D was obtained from Peter Kötter (Johann Wolfgang Goethe-University Frankfurt, Germany). The strain BY4741, a derivative of strain S288c, was obtained from EUROSCARF. Transformation of yeast cells was performed using the lithium acetate method (Gietz and Woods, 2002). The strains were selected on synthetic drop-out medium (Sigma-Aldrich) and the genetic modifications were confirmed by colony PCR. The yeast strains used in this study are listed in Table 2 and Table S3 as described in (Rodriguez et al., 2017). After the growth protocol was followed, samples for RNA-seq were taken after 4 residence times of steady-state growth. Four technical replicates were taken from each reactor for transcriptome analyses. Each strain was fermented twice to obtain 2 biological replicates. The pre-culture was done by inoculating a yeast colony into 50 ml of mineral medium in a 250-ml baffled shake flask and incubating the culture with shaking at 200 rpm at 30°C for around 12 hours. When the pre-culture reached OD600 of ca. 2, it was used to inoculate a bioreactor to a starting optical density of 0.05. The fermentations were performed in DasGip 1-L stirrer-pro vessels (Eppendorf, Jülich, Germany), using the working volume of 500 ml. The temperature was 30°C, agitation was at 600 rpm and aeration at 1 vvm. pH was monitored with a pH sensor (Mettler Toledo, Switzerland) and pH was maintained at 5.0 ± 0.05 by automatic addition of 2M KOH. Dissolved oxygen was above 30% throughout the fermentation as measured by the polarographic oxygen sensor (Mettler Toledo, Greifensee, Switzerland). The completion of the batch phase was determined by monitoring CO2 in the exhaust gas, when the second CO2 peak, corresponding to ethanol consumption phase, declined. We then initiated constant feed to obtain glucose-limited steady-state with dilution rate of 0.100±0.005 h-1. The volume was kept constant using an overflow pump. The RNA extraction was performed using the RNeasy Mini Kit (QIAGEN). The DNA was removed from the sample using Turbo DNA-free Kit (Ambion). The purified RNA samples were analyzed with a 2100 Bioanalyzer (Agilent Technologies, Inc., Santa Clara, CA) and stored at -80°C until further analysis. The sequencing libraries were prepared in four replicates using a TruSeq® Stranded mRNA sample preparation kit LT (Illumina Inc.). The final concentration of each cDNA library was measured by Qubit® 2.0 Fluorimeter and Qubit dsDNA Broad Range assay (Life Technologies). Average dsDNA library size was determined by using the Agilent DNA 1000 kit on an Agilent 2100 Bioanalyzer (Agilent Technologies). Based on the Bioanalyzer quality score, 2 technical replicates from each biological sample were selected. Libraries were normalized and pooled in 10 mM Tris-Cl, pH 8.0, plus 0.05% Tween 20 to the final concentration of 10 nM.

text: PTEF1->Fj_TAL, PPGK1->Ec_aroL, PTEF1->Sc_ARO7G141s, PPGK1->Sc_ARO4K229L

characteristic: genotype

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: optimised for p-coumaric acid production

characteristic: phenotype

text: Saccharomyces cerevisiae

text: CEN.PK - St4288

characteristic: strain

characteristic: title


text: 1. The Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark 2. Industrial Microbiology Section, Department of Biotechnology, Delft University of Technology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: baker's yeast

text: Saccharomyces cerevisiae

characteristic: organism

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: CEN.PK - St4288


characteristic: ENA-CHECKLIST

text: public

text: ArrayExpress

text: baker's yeast

characteristic: description

text: PTEF1->Fj_TAL, PPGK1->Ec_aroL, PTEF1->Sc_ARO7G141S, PPGK1->Sc_ARO4K229L

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: S288c - ST4353


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: ArrayExpress

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: not optimised for p-coumaric acid production

text: Saccharomyces cerevisiae

text: S288c - St4397


characteristic: External Id

text: public

text: ArrayExpress

characteristic: broker name

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: CEN.PK - St4408


RMAC

text: IMPERIAL COLLEGE LONDON

text: public

text: RMAC

text: Rotaria macrura

text: Rotaria macrura

text: Rotaria macrura genome sample


text: JLU

text: public

text: Xanthomonas arboricola pv. fragariae CFBP 6762

text: Xanthomonas arboricola pv. fragariae

text: Xanthomonas arboricola pv. fragariae

text: CFBP 6762


text: JLU

text: public

text: Xanthomonas arboricola pv. fragariae CFBP6773

text: Xanthomonas arboricola pv. fragariae

text: Xanthomonas arboricola pv. fragariae

text: CFBP 6773

text: Xanthomonas arboricola pv. fragariae CFBP 6773


text: JLU

text: public

text: Xanthomonas arboricola pv. fragariae LMG 19144

text: Xanthomonas arboricola pv. fragariae

text: Xanthomonas arboricola pv. fragariae

text: LMG 19144


text: JLU

text: public

text: Xanthomonas arboricola pv. fragariae LMG 19145

text: Xanthomonas arboricola pv. fragariae

text: Xanthomonas arboricola pv. fragariae

text: LMG 19145


text: JLU

text: public

text: Xanthomonas arboricola pv. fragariae LMG 19146

text: Xanthomonas arboricola pv. fragariae

text: Xanthomonas arboricola pv. fragariae

text: LMG 19146


RMAG

text: IMPERIAL COLLEGE LONDON

text: public

text: RMAG

text: Rotaria magnacalcarata

text: Rotaria magnacalcarata

text: Rotaria magnacalcarata genome sample


text: Marmaronetta angustirostris

characteristic: ArrayExpress-SPECIES

text: SC

text: public

text: Marbled teal

characteristic: common name

text: Marmaronetta angustirostris

text: Marmaronetta angustirostris

characteristic: subject id


text: MIT

text: public

characteristic: collection date

text: human

text: Gut

characteristic: environment (biome)

text: Gut

characteristic: environment (feature)

text: Stool

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: Homo sapiens

text: Alm Cdiff FMT WGS data

characteristic: project name

text: Homo sapiens

text: Illumina GAIIx

characteristic: sequencing method

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:UNIVERSITY OF BRITISH COLUMBIA

characteristic: Submitter Id

text: AATGATACGGCGACCACCGAGATCTACACGCT, CAAGCAGAAGACGGCATACGAGAT

characteristic: adapters

text: aquarium

text: saline water aquarium

text: water

text: Canada

unit: m

characteristic: geographic location (depth)

text: mimarks-survey

text: CGGCGATGAAAG

characteristic: multiplex identifiers

characteristic: nucleic acid extraction

text: metagenome

characteristic: organism

text: initial denaturation:98degC_0.017min; annealing:50degC_0.083min; elongation: 72degC_0.4min; final elongation:72degC_1min; 25

characteristic: pcr conditions

text: FWD:GTGYCAGCMGCCGCGGTAA REV:GGACTACHVGGGTWTCTAAT

characteristic: pcr primers

text: bottle

characteristic: sample collection device or method

text: filter

characteristic: sample material processing

characteristic: sample size

text: metagenome

text: Illumina MiSeq

text: environmental

characteristic: specific host

text: 16s rRNA

characteristic: target gene

characteristic: target subfragment

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: collection date

text: aquarium

characteristic: environment (biome)

text: saline water aquarium

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: TTCCGAATCGGC

text: metagenome

text: initial denaturation:98degC_0.017min; annealing:50degC_0.083min; elongation: 72degC_0.4min; final elongation:72degC_1min; 26

characteristic: project name

text: bottle

text: filter

text: metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: environmental

text: 16s rRNA

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF BRITISH COLUMBIA

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

text: aquarium

text: saline water aquarium

text: water

text: Canada

characteristic: geographic location (depth)

text: mimarks-survey

text: AATCATTTGTAA

characteristic: multiplex identifiers

characteristic: nucleic acid extraction

text: metagenome

characteristic: organism

text: initial denaturation:98degC_0.017min; annealing:50degC_0.083min; elongation: 72degC_0.4min; final elongation:72degC_1min; 27

characteristic: pcr conditions

characteristic: pcr primers

text: bottle

characteristic: sample collection device or method

text: filter

characteristic: sample material processing

characteristic: sample size

text: metagenome

text: Illumina MiSeq

text: environmental

characteristic: specific host

text: 16s rRNA

characteristic: target gene

characteristic: target subfragment

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: collection date

text: aquarium

characteristic: environment (biome)

text: saline water aquarium

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: AGTCTTAAAGGA

text: metagenome

text: initial denaturation:98degC_0.017min; annealing:50degC_0.083min; elongation: 72degC_0.4min; final elongation:72degC_1min; 28

characteristic: project name

text: bottle

text: filter

text: metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: environmental

text: 16s rRNA

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF BRITISH COLUMBIA

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

text: aquarium

text: saline water aquarium

text: water

text: Canada

characteristic: geographic location (depth)

text: mimarks-survey

text: AGGGAGCTTCGG

characteristic: multiplex identifiers

characteristic: nucleic acid extraction

text: metagenome

characteristic: organism

text: initial denaturation:98degC_0.017min; annealing:50degC_0.083min; elongation: 72degC_0.4min; final elongation:72degC_1min; 29

characteristic: pcr conditions

characteristic: pcr primers

text: bottle

characteristic: sample collection device or method

text: filter

characteristic: sample material processing

characteristic: sample size

text: metagenome

text: Illumina MiSeq

text: environmental

characteristic: specific host

text: 16s rRNA

characteristic: target gene

characteristic: target subfragment

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: blade

characteristic: body site

characteristic: collection date

text: aquarium

characteristic: environment (biome)

text: saline water aquarium

characteristic: environment (feature)

text: alga

characteristic: environment (material)

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mucus

characteristic: host body product

text: mimarks-survey

characteristic: investigation type

text: TCATTCCACTCA

text: metagenome

text: initial denaturation:98degC_0.017min; annealing:50degC_0.083min; elongation: 72degC_0.4min; final elongation:72degC_1min; 30

characteristic: project name

text: swab

text: snap off in cryotube

text: metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: Nereocystis leutkeana laboratory

text: 16s rRNA

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

text: blade

text: aquarium

text: saline water aquarium

text: alga

text: Canada

characteristic: geographic location (depth)

text: mucus

text: mimarks-survey

text: TTCCCACCCATT

characteristic: multiplex identifiers

characteristic: nucleic acid extraction

text: metagenome

characteristic: organism

text: initial denaturation:98degC_0.017min; annealing:50degC_0.083min; elongation: 72degC_0.4min; final elongation:72degC_1min; 31

characteristic: pcr conditions

characteristic: pcr primers

text: swab

characteristic: sample collection device or method

text: snap off in cryotube

characteristic: sample material processing

text: metagenome

text: Illumina MiSeq

text: Nereocystis leutkeana laboratory

characteristic: specific host

text: 16s rRNA

characteristic: target gene

characteristic: target subfragment

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: blade

characteristic: body site

characteristic: collection date

text: aquarium

characteristic: environment (biome)

text: saline water aquarium

characteristic: environment (feature)

text: alga

characteristic: environment (material)

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mucus

characteristic: host body product

text: mimarks-survey

characteristic: investigation type

text: CAGAAATGTGTC

text: metagenome

text: initial denaturation:98degC_0.017min; annealing:50degC_0.083min; elongation: 72degC_0.4min; final elongation:72degC_1min; 32

characteristic: project name

text: swab

text: snap off in cryotube

text: metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: Nereocystis leutkeana laboratory

text: 16s rRNA

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

text: blade

text: aquarium

text: saline water aquarium

text: alga

text: Canada

characteristic: geographic location (depth)

text: mucus

text: mimarks-survey

text: CCATAGGAGGCG

characteristic: multiplex identifiers

characteristic: nucleic acid extraction

text: metagenome

characteristic: organism

text: initial denaturation:98degC_0.017min; annealing:50degC_0.083min; elongation: 72degC_0.4min; final elongation:72degC_1min; 33

characteristic: pcr conditions

characteristic: pcr primers

text: swab

characteristic: sample collection device or method

text: snap off in cryotube

characteristic: sample material processing

text: metagenome

text: Illumina MiSeq

text: Nereocystis leutkeana laboratory

characteristic: specific host

text: 16s rRNA

characteristic: target gene

characteristic: target subfragment

text: water

characteristic: water environmental package