2ROI  17

text: TEAGASC

text: public

text: 2ROI 17

text: pig metagenome

text: pig metagenome

text: 1 ROI 17


2ROI 18

status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: TEAGASC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 2ROI 18

characteristic: Submitter Id

text: pig metagenome

characteristic: organism

text: pig metagenome

text: 2ROI 18

characteristic: title


2ROI 19

text: TEAGASC

text: public

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text: pig metagenome

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2ROI 20

text: TEAGASC

text: public

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2ROI 21

text: TEAGASC

text: public

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text: pig metagenome

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2ROI 22

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text: public

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2ROI 23

text: TEAGASC

text: public

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text: pig metagenome

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text: 2ROI 23


2ROI 24

text: TEAGASC

text: public

text: 2ROI 24

text: pig metagenome

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text: 2ROI 24


2ROI 25

text: TEAGASC

text: public

text: 2ROI 25

text: pig metagenome

text: pig metagenome

text: 2ROI 25


2ROI 26

text: TEAGASC

text: public

text: 2ROI 26

text: pig metagenome

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text: 2ROI 26


2ROI 27

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text: public

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text: pig metagenome

text: pig metagenome

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2ROI 28

text: TEAGASC

text: public

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text: pig metagenome

text: pig metagenome

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2ROI 29

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text: public

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text: pig metagenome

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2ROI 30

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text: public

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text: pig metagenome

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2ROI 31

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text: public

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text: pig metagenome

text: pig metagenome

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2ROI  32

text: TEAGASC

text: public

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text: pig metagenome

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text: 2ROI 32


2ROI  33

text: TEAGASC

text: public

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text: pig metagenome

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text: 2ROI 33


2ROI 34

text: TEAGASC

text: public

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text: pig metagenome

text: pig metagenome

text: 2ROI 34


2ROI 35

text: TEAGASC

text: public

text: 2ROI 35

text: pig metagenome

text: pig metagenome

text: 2ROI 35


2ROI  36

text: TEAGASC

text: public

text: 2ROI 36

text: pig metagenome

text: pig metagenome

text: 2ROI 36


2ROI 37

text: TEAGASC

text: public

text: 2ROI 37

text: pig metagenome

text: pig metagenome

text: 2ROI 37


2ROI 38

text: TEAGASC

text: public

text: 2ROI 38

text: pig metagenome

text: pig metagenome

text: 2ROI 38


2ROI 39

text: TEAGASC

text: public

text: 2ROI 39

text: pig metagenome

text: pig metagenome

text: 2ROI 39


2ROI  40

text: TEAGASC

text: public

text: 2ROI 40

text: pig metagenome

text: pig metagenome

text: 2ROI 40


2ROI 41

text: TEAGASC

text: public

text: 2ROI 41

text: pig metagenome

text: pig metagenome

text: 2ROI 41


2ROI 42

text: TEAGASC

text: public

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text: pig metagenome

text: pig metagenome

text: 2ROI 42


2ROI 43

text: TEAGASC

text: public

text: 2ROI 43

text: pig metagenome

text: pig metagenome

text: 2ROI 43


2ROI 44

text: TEAGASC

text: public

text: 2ROI 44

text: pig metagenome

text: pig metagenome

text: 2ROI 44


2ROI  45

text: TEAGASC

text: public

text: 2ROI 45

text: pig metagenome

text: pig metagenome

text: 2ROI 45


2ROI 46

text: TEAGASC

text: public

text: 2ROI 46

text: pig metagenome

text: pig metagenome

text: 2ROI 46


2ROI  47

text: TEAGASC

text: public

text: 2ROI 47

text: pig metagenome

text: pig metagenome

text: 2ROI 47


2ROI 48

text: TEAGASC

text: public

text: 2ROI 48

text: pig metagenome

text: pig metagenome

text: 2ROI 48


2ROI 49

text: TEAGASC

text: public

text: 2ROI 49

text: pig metagenome

text: pig metagenome

text: 2ROI 49


2ROI 50

text: TEAGASC

text: public

text: 2ROI 50

text: pig metagenome

text: pig metagenome

text: 2ROI 50


2ROI 51

text: TEAGASC

text: public

text: 2ROI 51

text: pig metagenome

text: pig metagenome

text: 2ROI 51


2ROI  52

text: TEAGASC

text: public

text: 2ROI 52

text: pig metagenome

text: pig metagenome

text: 2ROI 52


2ROI 53

text: TEAGASC

text: public

text: 2ROI 53

text: pig metagenome

text: pig metagenome

text: 2ROI 53


2ROI 54

text: TEAGASC

text: public

text: 2ROI 54

text: pig metagenome

text: pig metagenome

text: 2ROI 54


2ROI 55

text: TEAGASC

text: public

text: 2ROI 55

text: pig metagenome

text: pig metagenome

text: 2ROI 55


2ROI 56

text: TEAGASC

text: public

text: 2ROI 56

text: pig metagenome

text: pig metagenome

text: 2ROI 56


2ROI  57

text: TEAGASC

text: public

text: 2ROI 57

text: pig metagenome

text: pig metagenome

text: 2ROI 57


2ROI 58

text: TEAGASC

text: public

text: 2ROI 58

text: pig metagenome

text: pig metagenome

text: 2ROI 58


2ROI 59

text: TEAGASC

text: public

text: 2ROI 59

text: pig metagenome

text: pig metagenome

text: 2ROI 59


2ROI  60

text: TEAGASC

text: public

text: 2ROI 60

text: pig metagenome

text: pig metagenome

text: 2ROI 60


2ROI 61

text: TEAGASC

text: public

text: 2ROI 61

text: pig metagenome

text: pig metagenome

text: 2ROI 61


2ROI 62

text: TEAGASC

text: public

text: 2ROI 62

text: pig metagenome

text: pig metagenome

text: 2ROI 62


2ROI 63

text: TEAGASC

text: public

text: 2ROI 63

text: pig metagenome

text: pig metagenome

text: 2ROI 63


2ROI 64

text: TEAGASC

text: public

text: 2ROI 64

text: pig metagenome

text: pig metagenome

text: 2ROI 64


2ROI 65

text: TEAGASC

text: public

text: 2ROI 65

text: pig metagenome

text: pig metagenome

text: 2ROI 65


2ROI 66

text: TEAGASC

text: public

text: 2ROI 66

text: pig metagenome

text: pig metagenome

text: 2ROI 66


2ROI  67

text: TEAGASC

text: public

text: 2ROI 67

text: pig metagenome

text: pig metagenome

text: 2ROI 67


2ROI 68

text: TEAGASC

text: public

text: 2ROI 68

text: pig metagenome

text: pig metagenome

text: 2ROI 68


2ROI 69

text: TEAGASC

text: public

text: 2ROI 69

text: pig metagenome

text: pig metagenome

text: 2ROI 69


2ROI  70

text: TEAGASC

text: public

text: 2ROI 70

text: pig metagenome

text: pig metagenome

text: 2ROI 70


2ROI 71

text: TEAGASC

text: public

text: 2ROI 71

text: pig metagenome

text: pig metagenome

text: 2ROI 71


2ROI  72

text: TEAGASC

text: public

text: 2ROI 72

text: pig metagenome

text: pig metagenome

text: 2ROI 72


2ROI  73

text: TEAGASC

text: public

text: 2ROI 73

text: pig metagenome

text: pig metagenome

text: 2ROI 73


2ROI 74

text: TEAGASC

text: public

text: 2ROI 74

text: pig metagenome

text: pig metagenome

text: 2ROI 74


2ROI  75

text: TEAGASC

text: public

text: 2ROI 75

text: pig metagenome

text: pig metagenome

text: 2ROI 75


2ROI 76

text: TEAGASC

text: public

text: 2ROI 76

text: pig metagenome

text: pig metagenome

text: 2ROI 76


2ROI 77

text: TEAGASC

text: public

text: 2ROI 77

text: pig metagenome

text: pig metagenome

text: 2ROI 77


2ROI 78

text: TEAGASC

text: public

text: 2ROI 78

text: pig metagenome

text: pig metagenome

text: 2ROI 78


2ROI 79

text: TEAGASC

text: public

text: 2ROI 79

text: pig metagenome

text: pig metagenome

text: 2ROI 79


2ROI 80

text: TEAGASC

text: public

text: 2ROI 80

text: pig metagenome

text: pig metagenome

text: 2ROI 80


2ROI 82

text: TEAGASC

text: public

text: 2ROI 82

text: pig metagenome

text: pig metagenome

text: 2ROI 82


2ROI 83

text: TEAGASC

text: public

text: 2ROI 83

text: pig metagenome

text: pig metagenome

text: 2ROI 83


2ROI 84

text: TEAGASC

text: public

text: 2ROI 84

text: pig metagenome

text: pig metagenome

text: 2ROI 84


2ROI 85

text: TEAGASC

text: public

text: 2ROI 85

text: pig metagenome

text: pig metagenome

text: 2ROI 85


2ROI 86

text: TEAGASC

text: public

text: 2ROI 86

text: pig metagenome

text: pig metagenome

text: 2ROI 86


2ROI 87

text: TEAGASC

text: public

text: 2ROI 87

text: pig metagenome

text: pig metagenome

text: 2ROI 87


2ROI 88

text: TEAGASC

text: public

text: 2ROI 88

text: pig metagenome

text: pig metagenome

text: 2ROI 88


2ROI 89

text: TEAGASC

text: public

text: 2ROI 89

text: pig metagenome

text: pig metagenome

text: 2ROI 89


2ROI 90

text: TEAGASC

text: public

text: 2ROI 90

text: pig metagenome

text: pig metagenome

text: 2ROI 90


2ROI 91

text: TEAGASC

text: public

text: 2ROI 91

text: pig metagenome

text: pig metagenome

text: 2ROI 91


2ROI 92

text: TEAGASC

text: public

text: 2ROI 92

text: pig metagenome

text: pig metagenome

text: 2ROI 92


2ROI 93

text: TEAGASC

text: public

text: 2ROI 93

text: pig metagenome

text: pig metagenome

text: 2ROI 93


2ROI 94

text: TEAGASC

text: public

text: 2ROI 94

text: pig metagenome

text: pig metagenome

text: 2ROI 94


2ROI 95

text: TEAGASC

text: public

text: 2ROI 95

text: pig metagenome

text: pig metagenome

text: 2ROI 95


2ROI 96

text: TEAGASC

text: public

text: 2ROI 96

text: pig metagenome

text: pig metagenome

text: 2ROI 96


2ROI 97

text: TEAGASC

text: public

text: 2ROI 97

text: pig metagenome

text: pig metagenome

text: 2ROI 97


2ROI 98

text: TEAGASC

text: public

text: 2ROI 98

text: pig metagenome

text: pig metagenome

text: 2ROI 98


2ROI 99

text: TEAGASC

text: public

text: 2ROI 99

text: pig metagenome

text: pig metagenome

text: 2ROI 99


2ROI 100

text: TEAGASC

text: public

text: 2ROI 100

text: pig metagenome

text: pig metagenome

text: 2ROI 100


2ROI 101

text: TEAGASC

text: public

text: 2ROI 101

text: pig metagenome

text: pig metagenome

text: 2ROI 101


2ROI 102

text: TEAGASC

text: public

text: 2ROI 102

text: pig metagenome

text: pig metagenome

text: 2ROI 102


2ROI 103

text: TEAGASC

text: public

text: 2ROI 103

text: pig metagenome

text: pig metagenome

text: 2ROI 103


2ROI 104

text: TEAGASC

text: public

text: 2ROI 104

text: pig metagenome

text: pig metagenome

text: 2ROI 104


2ROI 105

text: TEAGASC

text: public

text: 2ROI 105

text: pig metagenome

text: pig metagenome

text: 2ROI 105


2ROI 106

text: TEAGASC

text: public

text: 2ROI 106

text: pig metagenome

text: pig metagenome

text: 2ROI 106


2ROI 107

text: TEAGASC

text: public

text: 2ROI 107

text: pig metagenome

text: pig metagenome

text: 2ROI 107


2ROI 108

text: TEAGASC

text: public

text: 2ROI 108

text: pig metagenome

text: pig metagenome

text: 2ROI 108


2ROI 109

text: TEAGASC

text: public

text: 2ROI 109

text: pig metagenome

text: pig metagenome

text: 2ROI 109


2ROI 110

text: TEAGASC

text: public

text: 2ROI 110

text: pig metagenome

text: pig metagenome

text: 2ROI 110


2ROI 111

text: TEAGASC

text: public

text: 2ROI 111

text: pig metagenome

text: pig metagenome

text: 2ROI 111


2ROI 112

text: TEAGASC

text: public

text: 2ROI 112

text: pig metagenome

text: pig metagenome

text: 2ROI 112


2ROI 113

text: TEAGASC

text: public

text: 2ROI 113

text: pig metagenome

text: pig metagenome

text: 2ROI 113


2ROI 114

text: TEAGASC

text: public

text: 2ROI 114

text: pig metagenome

text: pig metagenome

text: 2ROI 114


2ROI 115

text: TEAGASC

text: public

text: 2ROI 115

text: pig metagenome

text: pig metagenome

text: 2ROI 115


2ROI 116

text: TEAGASC

text: public

text: 2ROI 116

text: pig metagenome

text: pig metagenome

text: 2ROI 116


2ROI 117

text: TEAGASC

text: public

text: 2ROI 117

text: pig metagenome

text: pig metagenome

text: 2ROI 117


2ROI 118

text: TEAGASC

text: public

text: 2ROI 118

text: pig metagenome

text: pig metagenome

text: 2ROI 118


2ROI 119

text: TEAGASC

text: public

text: 2ROI 119

text: pig metagenome

text: pig metagenome

text: 2ROI 119


2ROI 120

text: TEAGASC

text: public

text: 2ROI 120

text: pig metagenome

text: pig metagenome

text: 2ROI 120


2ROI 121

text: TEAGASC

text: public

text: 2ROI 121

text: pig metagenome

text: pig metagenome

text: 2ROI 121


2ROI 122

text: TEAGASC

text: public

text: 2ROI 122

text: pig metagenome

text: pig metagenome

text: 2ROI 122


2ROI 123

text: TEAGASC

text: public

text: 2ROI 123

text: pig metagenome

text: pig metagenome

text: 2ROI 123


2ROI 124

text: TEAGASC

text: public

text: 2ROI 124

text: pig metagenome

text: pig metagenome

text: 2ROI 124


2ROI 125

text: TEAGASC

text: public

text: 2ROI 125

text: pig metagenome

text: pig metagenome

text: 2ROI 125


2ROI 126

text: TEAGASC

text: public

text: 2ROI 126

text: pig metagenome

text: pig metagenome

text: 2ROI 126


2ROI 127

text: TEAGASC

text: public

text: 2ROI 127

text: pig metagenome

text: pig metagenome

text: 2ROI 127


2ROI 128

text: TEAGASC

text: public

text: 2ROI 128

text: pig metagenome

text: pig metagenome

text: 2ROI 128


2ROI 129

text: TEAGASC

text: public

text: 2ROI 129

text: pig metagenome

text: pig metagenome

text: 2ROI 129


2ROI 130

text: TEAGASC

text: public

text: 2ROI 130

text: pig metagenome

text: pig metagenome

text: 2ROI 130


2ROI 131

text: TEAGASC

text: public

text: 2ROI 131

text: pig metagenome

text: pig metagenome

text: 2ROI 131


2ROI 132

text: TEAGASC

text: public

text: 2ROI 132

text: pig metagenome

text: pig metagenome

text: 2ROI 132


2ROI 133

text: TEAGASC

text: public

text: 2ROI 133

text: pig metagenome

text: pig metagenome

text: 2ROI 133


2ROI 134

text: TEAGASC

text: public

text: 2ROI 134

text: pig metagenome

text: pig metagenome

text: 2ROI 134


2ROI 135

text: TEAGASC

text: public

text: 2ROI 135

text: pig metagenome

text: pig metagenome

text: 2ROI 135


2ROI 136

text: TEAGASC

text: public

text: 2ROI 136

text: pig metagenome

text: pig metagenome

text: 2ROI 136


2ROI 137

text: TEAGASC

text: public

text: 2ROI 137

text: pig metagenome

text: pig metagenome

text: 2ROI 137


2ROI 138

text: TEAGASC

text: public

text: 2ROI 138

text: pig metagenome

text: pig metagenome

text: 2ROI 138


2ROI 139

text: TEAGASC

text: public

text: 2ROI 139

text: pig metagenome

text: pig metagenome

text: 2ROI 139


2ROI 140

text: TEAGASC

text: public

text: 2ROI 140

text: pig metagenome

text: pig metagenome

text: 2ROI 140


2ROI 141

text: TEAGASC

text: public

text: 2ROI 141

text: pig metagenome

text: pig metagenome

text: 2ROI 141


2ROI 142

text: TEAGASC

text: public

text: 2ROI 142

text: pig metagenome

text: pig metagenome

text: 2ROI 142


2ROI 143

text: TEAGASC

text: public

text: 2ROI 143

text: pig metagenome

text: pig metagenome

text: 2ROI 143


NI 1

text: TEAGASC

text: public

text: NI 1

text: pig metagenome

text: pig metagenome

text: NI 1


NI 2

text: TEAGASC

text: public

text: NI 2

text: pig metagenome

text: pig metagenome

text: NI 2


NI 3

text: TEAGASC

text: public

text: NI 3

text: pig metagenome

text: pig metagenome

text: NI 3


NI 4

text: TEAGASC

text: public

text: NI 4

text: pig metagenome

text: pig metagenome

text: NI 4


NI 5

text: TEAGASC

text: public

text: NI 5

text: pig metagenome

text: pig metagenome

text: NI 5


NI 6

text: TEAGASC

text: public

text: NI 6

text: pig metagenome

text: pig metagenome

text: NI 6


NI 7

text: TEAGASC

text: public

text: NI 7

text: pig metagenome

text: pig metagenome

text: NI 7


NI 8

text: TEAGASC

text: public

text: NI 8

text: pig metagenome

text: pig metagenome

text: NI 8


NI 9

text: TEAGASC

text: public

text: NI 9

text: pig metagenome

text: pig metagenome

text: NI 9


NI 10

text: TEAGASC

text: public

text: NI 10

text: pig metagenome

text: pig metagenome

text: NI 10


NI 11

text: TEAGASC

text: public

text: NI 11

text: pig metagenome

text: pig metagenome

text: NI 11


NI 12

text: TEAGASC

text: public

text: NI 12

text: pig metagenome

text: pig metagenome

text: NI 12


NI 13

text: TEAGASC

text: public

text: NI 13

text: pig metagenome

text: pig metagenome

text: NI 13


NI 14

text: TEAGASC

text: public

text: NI 14

text: pig metagenome

text: pig metagenome

text: NI 14


NI 15

text: TEAGASC

text: public

text: NI 15

text: pig metagenome

text: pig metagenome

text: NI 15


NI 16

text: TEAGASC

text: public

text: NI 16

text: pig metagenome

text: pig metagenome

text: NI 16


NI 17

text: TEAGASC

text: public

text: NI 17

text: pig metagenome

text: pig metagenome

text: NI 17


NI 18

text: TEAGASC

text: public

text: NI 18

text: pig metagenome

text: pig metagenome

text: NI 18


NI 19

text: TEAGASC

text: public

text: NI 19

text: pig metagenome

text: pig metagenome

text: NI 19


NI 20

text: TEAGASC

text: public

text: NI 20

text: pig metagenome

text: pig metagenome

text: NI 20


NI 21

text: TEAGASC

text: public

text: NI 21

text: pig metagenome

text: pig metagenome

text: NI 21


NI 22

text: TEAGASC

text: public

text: NI 22

text: pig metagenome

text: pig metagenome

text: NI 22


NI 23

text: TEAGASC

text: public

text: NI 23

text: pig metagenome

text: pig metagenome

text: NI 23


NI 24

text: TEAGASC

text: public

text: NI 24

text: pig metagenome

text: pig metagenome

text: NI 24


NI 25

text: TEAGASC

text: public

text: NI 25

text: pig metagenome

text: pig metagenome

text: NI 25


NI 26

text: TEAGASC

text: public

text: NI 26

text: pig metagenome

text: pig metagenome

text: NI 26


NI 27

text: TEAGASC

text: public

text: NI 27

text: pig metagenome

text: pig metagenome

text: NI 27


NI 28

text: TEAGASC

text: public

text: NI 28

text: pig metagenome

text: pig metagenome

text: NI 28


NI 29

text: TEAGASC

text: public

text: NI 29

text: pig metagenome

text: pig metagenome

text: NI 29


NI 30

text: TEAGASC

text: public

text: NI 30

text: pig metagenome

text: pig metagenome

text: NI 30


NI 31

text: TEAGASC

text: public

text: NI 31

text: pig metagenome

text: pig metagenome

text: NI 31


NI 32

text: TEAGASC

text: public

text: NI 32

text: pig metagenome

text: pig metagenome

text: NI 32


NI 33

text: TEAGASC

text: public

text: NI 33

text: pig metagenome

text: pig metagenome

text: NI 33


NI 34

text: TEAGASC

text: public

text: NI 34

text: pig metagenome

text: pig metagenome

text: NI 34


NI 35

text: TEAGASC

text: public

text: NI 35

text: pig metagenome

text: pig metagenome

text: NI 35


NI 36

text: TEAGASC

text: public

text: NI 36

text: pig metagenome

text: pig metagenome

text: NI 35


NI 37

text: TEAGASC

text: public

text: NI 37

text: pig metagenome

text: pig metagenome

text: NI 37


NI 38

text: TEAGASC

text: public

text: NI 38

text: pig metagenome

text: pig metagenome

text: NI 38


NI 39

text: TEAGASC

text: public

text: NI 39

text: pig metagenome

text: pig metagenome

text: NI 39


NI 40

text: TEAGASC

text: public

text: NI 40

text: pig metagenome

text: pig metagenome

text: NI 40


NI 41

text: TEAGASC

text: public

text: NI 41

text: pig metagenome

text: pig metagenome

text: NI 41


NI 42

text: TEAGASC

text: public

text: NI 42

text: pig metagenome

text: pig metagenome

text: NI 42


NI 43

text: TEAGASC

text: public

text: NI 43

text: pig metagenome

text: pig metagenome

text: NI 43


NI 44

text: TEAGASC

text: public

text: NI 44

text: pig metagenome

text: pig metagenome

text: NI 44


NI 45

text: TEAGASC

text: public

text: NI 45

text: pig metagenome

text: pig metagenome

text: NI 45


NI 46

text: TEAGASC

text: public

text: NI 46

text: pig metagenome

text: pig metagenome

text: NI 46


NI 47

text: TEAGASC

text: public

text: NI 47

text: pig metagenome

text: pig metagenome

text: NI 47


NI 48

text: TEAGASC

text: public

text: NI 48

text: pig metagenome

text: pig metagenome

text: NI 48


2ROI 81

text: TEAGASC

text: public

text: 2ROI 81

text: pig metagenome

text: pig metagenome

text: 2ROI 81


text: public

tag: Namespace:Sanofi-Aventis Deutschland GmbH R&D TMED

text: 12 to 14

unit: week

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: Protocols: All animals had free access to food and water during the experiment. Vehicle or Liraglutide at a dose of 600 µg/kg/d were continuously infused (at a dose of 600 µg/kg/d) over a 14 days period. RNA was isolated from individual WAT samples, homogenized in 1ml trizol and 200µl chloroform. Aqueous phase of 500µl was obtained and mixed with 500µl of Isopropanol. After centrifugation, RNA pellets were washed trice in 80% Ethanol and finally stored in 30µl of DEPC-water. Total RNA was prepared with the Illumina RNA Sample Prep Kit to deliver a mRNA-focused library.

characteristic: description

text: Lep ob/ob

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: white adipose tissue

characteristic: organism part

text: epididymal fat pad

characteristic: sampling site

text: Mus musculus

text: female

characteristic: sex

characteristic: strain

unit: gram

characteristic: weight loss

type: has member


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanofi-Aventis Deutschland GmbH R&D TMED

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: 12 to 14

text: ArrayExpress

text: house mouse

text: Lep ob/ob

text: Mus musculus

text: Mus musculus

text: white adipose tissue

text: epididymal fat pad

text: Mus musculus

text: female


text: Homo Sapien

characteristic: ArrayExpress-SPECIES

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

characteristic: subject id

characteristic: title


text: NCCSI

text: public

text: [Eubacterium] hallii

text: [Eubacterium] hallii

text: Genome sequence of Eubacterium hallii L2-7


text: PNRI

text: public

text: baker's yeast

characteristic: common name

text: Homozygosed haploid derivative of UC5 with HO deleted. Disomic for Chr I

characteristic: description

text: alpha

characteristic: mating type

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Sake strain YO486 (UC5)


characteristic: ENA-CHECKLIST

text: Agricultural University of Athens

text: public

tag: Namespace:Agricultural University of Athens

text: Partial sequence of plasmid pLAC3 of Lactobacillus acidipiscis ACA-DC 1533

text: Kopanisti cheese

characteristic: isolation source

text: Lactobacillus acidipiscis

text: Lactobacillus acidipiscis

text: ACA-DC 1533

characteristic: strain


text: Homo sapiens

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: human

text: Homo sapiens

text: Homo sapiens


CMTALT

text: INRA

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: CMTALT

text: Stephane Chaillou

characteristic: collected by

characteristic: collection date

characteristic: culture collection

text: Beef Carpaccio

text: Beef carpaccio

text: Lactococcus piscium

text: Lactococcus piscium

text: Food Sample


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:MARINE BIOLOGICAL ASSOCIATION OF THE UK

characteristic: Submitter Id

text: Sediment only treatment, Replicate 1, Day 0, Technical Replicate 1

text: Yes

characteristic: environmental sample

text: uncultured prokaryote

characteristic: organism

text: uncultured prokaryote


characteristic: ENA-CHECKLIST

text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Sediment only treatment, Replicate 1, Day 0, Technical Replicate 2

characteristic: description

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Sediment only treatment, Replicate 1, Day 7, Technical Replicate 1

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


characteristic: ENA-LAST-UPDATE

text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Sediment only treatment, Replicate 1, Day 7, Technical Replicate 2

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


characteristic: External Id

text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Sediment only treatment, Replicate 1, Day 14, Technical Replicate 1

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

characteristic: INSDC center name

text: public

text: Sediment only treatment, Replicate 1, Day 14, Technical Replicate 2

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

characteristic: INSDC first public

text: public

text: Sediment only treatment, Replicate 2, Day 0, Technical Replicate 1

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Sediment only treatment, Replicate 2, Day 0, Technical Replicate 2

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Sediment only treatment, Replicate 2, Day 7, Technical Replicate 1

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Sediment only treatment, Replicate 2, Day 7, Technical Replicate 2

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Sediment only treatment, Replicate 2, Day 14, Technical Replicate 1

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Sediment only treatment, Replicate 2, Day 14, Technical Replicate 2

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Sediment only treatment, Replicate 3, Day 0, Technical Replicate 1

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Sediment only treatment, Replicate 3, Day 0, Technical Replicate 2

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Sediment only treatment, Replicate 3, Day 7, Technical Replicate 1

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Sediment only treatment, Replicate 3, Day 7, Technical Replicate 2

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Sediment only treatment, Replicate 3, Day 14, Technical Replicate 1

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Sediment only treatment, Replicate 3, Day 14, Technical Replicate 2

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Mucus only treatment, Replicate 1, Day 0, Technical Replicate 1

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Mucus only treatment, Replicate 1, Day 0, Technical Replicate 2

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Mucus only treatment, Replicate 1, Day 7, Technical Replicate 1

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Mucus only treatment, Replicate 1, Day 7, Technical Replicate 2

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Mucus only treatment, Replicate 1, Day 14, Technical Replicate 1

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Mucus only treatment, Replicate 1, Day 14, Technical Replicate 2

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Mucus only treatment, Replicate 2, Day 0, Technical Replicate 1

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Mucus only treatment, Replicate 2, Day 0, Technical Replicate 2

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Mucus only treatment, Replicate 2, Day 7, Technical Replicate 1

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Mucus only treatment, Replicate 2, Day 7, Technical Replicate 2

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Mucus only treatment, Replicate 2, Day 14, Technical Replicate 1

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Mucus only treatment, Replicate 2, Day 14, Technical Replicate 2

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Mucus only treatment, Replicate 3, Day 0, Technical Replicate 1

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Mucus only treatment, Replicate 3, Day 0, Technical Replicate 2

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Mucus only treatment, Replicate 3, Day 7, Technical Replicate 1

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Mucus only treatment, Replicate 3, Day 7, Technical Replicate 2

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Mucus only treatment, Replicate 3, Day 14, Technical Replicate 1

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Mucus only treatment, Replicate 3, Day 14, Technical Replicate 2

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Sediment + Mucus treatment, Replicate 1, Day 0, Technical Replicate 1

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Sediment + Mucus treatment, Replicate 1, Day 0, Technical Replicate 2

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Sediment + Mucus treatment, Replicate 1, Day 7, Technical Replicate 1

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Sediment + Mucus treatment, Replicate 1, Day 7, Technical Replicate 2

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Sediment + Mucus treatment, Replicate 1, Day 14, Technical Replicate 1

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Sediment + Mucus treatment, Replicate 1, Day 14, Technical Replicate 2

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Sediment + Mucus treatment, Replicate 2, Day 0, Technical Replicate 1

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Sediment + Mucus treatment, Replicate 2, Day 0, Technical Replicate 2

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Sediment + Mucus treatment, Replicate 2, Day 7, Technical Replicate 1

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Sediment + Mucus treatment, Replicate 2, Day 7, Technical Replicate 2

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Sediment + Mucus treatment, Replicate 2, Day 14, Technical Replicate 1

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Sediment + Mucus treatment, Replicate 2, Day 14, Technical Replicate 2

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Sediment + Mucus treatment, Replicate 3, Day 0, Technical Replicate 1

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Sediment + Mucus treatment, Replicate 3, Day 7, Technical Replicate 1

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Sediment + Mucus treatment, Replicate 3, Day 7, Technical Replicate 2

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Sediment + Mucus treatment, Replicate 3, Day 14, Technical Replicate 1

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: MARINE BIOLOGICAL ASSOCIATION OF THE UK

text: public

text: Sediment + Mucus treatment, Replicate 3, Day 14, Technical Replicate 2

text: Yes

text: uncultured prokaryote

text: uncultured prokaryote


text: Stowers Institute for Medical Research

text: public

tag: Namespace:Stowers Institute for Medical Research

text: 98 to 119

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: Protocols: Ovaries were harvested from reproductively young and old mice in Leibovitz’s L-15 medium (Life Technologies Corporation, Grand Island, NY) supplemented with 3 mg/ml polyvinylpyrrolidone (Sigma-Aldrich, St. Louis, MO) and 0.5% Pen Strep (Life Technologies) (L15/PVP). Ovaries were disrupted mechanically using insulin syringes and late primary to transitioning secondary stage follicles were identified based on size and morphology and collected. For short-term culture (maximum of 40 minutes), follicles were cultured in CZB media (EMD Millipore, Billerica, MA) overlaid with mineral oil in a humidified atmosphere of 5% CO2 in air at 37 oC. Follicles were imaged using the EVOS FL Auto Cell Imaging system, and the mean diameter was determined based on two perpendicular measurements from basement membrane-to-basement membrane. Two age cohorts of adult CB6F1 female mice were used: 6-12 week old mice (reproductively young; Envigo, Indianapolis, IN) and 14-17 month old mice (reproductively old; National Institute on Aging Aged Rodent Colony, Bethesda, MD). 14-17 month old mice were selected as the reproductively old cohort because it has been shown that a significant deterioration in egg quality and the ovarian microenvironment occurs at this age (Chiang et al. 2010; Briley et al. 2016). We acknowledge that we do not know whether the founder sub-strains used to produce the F1 animals in our study were identical between our young and old mouse cohorts. Although we can not rule out confounding effects due to potential sub-strain variability, we think this contribution is likely to be minimal given that most reproductive aging phenotypes are conserved across strains (i.e. follicle loss, increased egg aneuploidy, increased ovarian stromal fibrosis) (Chiang et al. 2010; Lister et al. 2010; Hirshfeld-Cytron et al. 2011; Merriman et al. 2012; Briley et al. 2016). Pre-pubertal (12-13 day old) CD-1 female mice (Envigo) were used to optimize nucleolar antibody staining conditions. All mice were housed in a controlled barrier facility at the University of Kansas Medical Center’s (KUMC) Research Support Facility under constant temperature, humidity, and light (12h light/12h dark). Food and water were provided ad libitum. All experimental protocols were approved by the Institutional Animal Care and Use Committee of the University of Kansas Medical Center and were in accordance with National Institutes of Health Guidelines. Follicles were isolated from reproductive young (n = 5) and old CB6F1 (n = 4) mice as mentioned above. Isolated follicles were placed individually in 5 μl droplets of L15/PVP under oil and imaged immediately. Individual follicles were snap frozen in 3.5 μl 2x reaction buffer supplied in the cDNA synthesis reagents. For each animal, the total time that elapsed between mouse euthanasia and snap frozen samples did not exceed 30 minutes. Construction of cDNA was done using the Smart-Seq v4 Ultra Low Input RNA kit (Clontech Laboratories Inc, Mountain View, CA) with 14 cycles of PCR according to manufacturer’s instructions. Quality and yield of cDNA was assessed using an Agilent 2100 Bioanalyzer (Agilent Technologies, Santa Clara, CA). Adapter-ligated libraries were constructed from 1 ng cDNA using the Nextera XT kit (Illumina Inc, San Diego, CA) according to manufacturer’s instructions. Resulting libraries were checked for quality and quantity using the Agilent 2100 Bioanalyzer and Qubit Fluorometer (Thermo Fisher Scientific, Waltham, MA).

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

characteristic: individual

text: Mus musculus

text: Mus musculus

text: mature ovarian follicle

characteristic: organism part

text: reproductively old

characteristic: phenotype

text: follicle 2

characteristic: sampling site

text: Mus musculus

text: female

characteristic: sex

characteristic: strain


characteristic: ENA-CHECKLIST

text: Stowers Institute for Medical Research

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 98 to 119

text: ArrayExpress

text: house mouse

characteristic: description

text: normal

text: wild type genotype

text: Mus musculus

characteristic: organism

text: Mus musculus

text: mature ovarian follicle

text: reproductively old

text: follicle 3

text: Mus musculus

text: female

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Stowers Institute for Medical Research

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: 98 to 119

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: normal

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: mature ovarian follicle

text: reproductively old

text: follicle 4

text: Mus musculus

text: female


text: Stowers Institute for Medical Research

text: public

text: 98 to 119

text: ArrayExpress

text: house mouse

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

characteristic: individual

text: Mus musculus

text: Mus musculus

text: mature ovarian follicle

characteristic: organism part

text: reproductively old

characteristic: phenotype

text: follicle 5

characteristic: sampling site

text: Mus musculus

text: female

characteristic: sex

characteristic: strain


characteristic: ENA-CHECKLIST

text: Stowers Institute for Medical Research

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 98 to 119

text: ArrayExpress

text: house mouse

characteristic: description

text: normal

text: wild type genotype

text: Mus musculus

characteristic: organism

text: Mus musculus

text: mature ovarian follicle

text: reproductively old

text: follicle 1

text: Mus musculus

text: female

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Stowers Institute for Medical Research

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: 98 to 119

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: normal

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: mature ovarian follicle

text: reproductively old

text: follicle 7

text: Mus musculus

text: female


text: Stowers Institute for Medical Research

text: public

text: 6 to 12

text: ArrayExpress

text: house mouse

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

characteristic: individual

text: Mus musculus

text: Mus musculus

text: mature ovarian follicle

characteristic: organism part

text: reproductively young

characteristic: phenotype

text: follicle 12

characteristic: sampling site

text: Mus musculus

text: female

characteristic: sex

characteristic: strain


characteristic: ENA-CHECKLIST

text: Stowers Institute for Medical Research

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 6 to 12

text: ArrayExpress

text: house mouse

characteristic: description

text: normal

text: wild type genotype

text: Mus musculus

characteristic: organism

text: Mus musculus

text: mature ovarian follicle

text: reproductively young

text: follicle 7

text: Mus musculus

text: female

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Stowers Institute for Medical Research

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: 6 to 12

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: normal

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: mature ovarian follicle

text: reproductively young

text: follicle 4

text: Mus musculus

text: female


text: Stowers Institute for Medical Research

text: public

text: 6 to 12

text: ArrayExpress

text: house mouse

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

characteristic: individual

text: Mus musculus

text: Mus musculus

text: mature ovarian follicle

characteristic: organism part

text: reproductively young

characteristic: phenotype

text: follicle 6

characteristic: sampling site

text: Mus musculus

text: female

characteristic: sex

characteristic: strain


characteristic: ENA-CHECKLIST

text: Stowers Institute for Medical Research

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 6 to 12

text: ArrayExpress

text: house mouse

characteristic: description

text: normal

text: wild type genotype

text: Mus musculus

characteristic: organism

text: Mus musculus

text: mature ovarian follicle

text: reproductively young

text: follicle 9

text: Mus musculus

text: female

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Stowers Institute for Medical Research

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: 6 to 12

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: normal

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: mature ovarian follicle

text: reproductively young

text: follicle 2

text: Mus musculus

text: female


text: Stowers Institute for Medical Research

text: public

text: 6 to 12

text: ArrayExpress

text: house mouse

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

characteristic: individual

text: Mus musculus

text: Mus musculus

text: mature ovarian follicle

characteristic: organism part

text: reproductively young

characteristic: phenotype

text: follicle 5

characteristic: sampling site

text: Mus musculus

text: female

characteristic: sex

characteristic: strain


characteristic: ENA-CHECKLIST

text: Stowers Institute for Medical Research

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 6 to 12

text: ArrayExpress

text: house mouse

characteristic: description

text: normal

text: wild type genotype

text: Mus musculus

characteristic: organism

text: Mus musculus

text: mature ovarian follicle

text: reproductively young

text: follicle 8

text: Mus musculus

text: female

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MAX F. PERUTZ LABORATORIES

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:MAX F. PERUTZ LABORATORIES

text: potato

characteristic: common name

text: NBS fragments isolated by amplification of potato cultivar Eurotango. Sample donated by Böhm-Nordkartoffel, DE

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Eurotango


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Allians. Sample donated by Böhm-Nordkartoffel, DE

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Allians


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Solara. Sample donated by Böhm-Nordkartoffel, DE

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Solara


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Merida. Sample donated by Böhm-Nordkartoffel, DE

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Merida


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Destiny. Sample donated by Agrico, NL

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Destiny


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Rudolph. Sample donated by Agrico, NL

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Rudolph


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar White_Lady. Sample donated by Keszethely, HU

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar White_Lady


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Balatonyi_Rozsa. Sample donated by Keszethely, HU

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Balatonyi_Rozsa


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Eden. Sample donated by Bretagne Plants, FR

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Eden


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Fridor. Sample donated by Bretagne Plants and Billant, FR

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Fridor


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Leire. Sample donated by Neiker, ES

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Leire


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Danva. Sample donated by DANESPO, DK

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Danva


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar 5_104_01. Sample donated by NORIKA, DE

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar 5_104_01


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar MFII. Sample donated by AIT, AT (obtained from CIP; PE)

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar MFII


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar TPS67. Sample donated by AIT, AT (obtained from CIP; PE)

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar TPS67


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar MT_pool_M. Sample donated by AIT, AT

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar MT_pool_M


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar MT_pool_T. Sample donated by AIT, AT

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar MT_pool_T


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar MT_pool_S. Sample donated by AIT, AT

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar MT_pool_S


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Crp_1. Sample donated by AIT, AT

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Crp_1


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Crp_4. Sample donated by AIT, AT

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Crp_4


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar crp_pool_R. Sample donated by AIT, AT (obtained from CIP; PE)

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar crp_pool_R


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar crp_pool_S. Sample donated by AIT, AT (obtained from CIP; PE)

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar crp_pool_S


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Sarpo_Mira. Sample donated by NORIKA, DE

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Sarpo_Mira


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Talent_NN_cross_D1_6. Sample donated by NORIKA, DE

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Talent_NN_cross_D1_6


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Alegria. Sample donated by NORIKA, DE

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Alegria


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Baltica. Sample donated by NORIKA, DE

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Baltica


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Amanda. Sample donated by Solana, DE

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Amanda


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Toscana. Sample donated by Solana, DE

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Toscana


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Ventura. Sample donated by Solana, DE

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Ventura


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Granola. Sample donated by Solana, DE

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Granola


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Sibu. Sample donated by Solana, DE

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Sibu


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Russet_Burbank. Sample donated by AIT, AT (obtained from IPK at Groß Lüsewitz; DE)

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Russet_Burbank


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Shepody. Sample donated by AIT, AT (obtained from IPK at Groß Lüsewitz; DE)

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Shepody


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Bionta. Sample donated by NÖS, AT

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Bionta


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Innovator. Sample donated by NÖS, AT

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Innovator


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Agata. Sample donated by Agrico, NL

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Agata


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Rodriga. Sample donated by Solana, DE

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Rodriga


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Agria. Sample donated by Europlant, DE

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Agria


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Sinora. Sample donated by NÖS, AT

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Sinora


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Nicola. Sample donated by NÖS, AT

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Nicola


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Valeria. Sample donated by NÖS, AT

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Valeria


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Nela. Sample donated by APPACALE, ES

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Nela


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Jimena. Sample donated by APPACALE, ES

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Jimena


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Valnera. Sample donated by APPACALE, ES

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Valnera


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Pomar. Sample donated by APPACALE, ES

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Pomar


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar 2000_Q84_7. Sample donated by APPACALE, ES

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar 2000_Q84_7


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar R1. Sample donated by AIT, AT (obtained from IPK at Groß Lüsewitz; DE)

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar R1


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar R2. Sample donated by AIT, AT (obtained from IPK at Groß Lüsewitz; DE)

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar R2


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar R5. Sample donated by AIT, AT (obtained from IPK at Groß Lüsewitz; DE)

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar R5


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar R3. Sample donated by AIT, AT (obtained from IPK at Groß Lüsewitz; DE)

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar R3


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar R8. Sample donated by AIT, AT (obtained from IPK at Groß Lüsewitz; DE)

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar R8


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar R9. Sample donated by AIT, AT (obtained from IPK at Groß Lüsewitz; DE)

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar R9


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Kuras. Sample donated by Agrico, NL

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Kuras


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Gorbea. Sample donated by Neiker, ES

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Gorbea


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar NLH072_A. Sample donated by Neiker, ES

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar NLH072_A


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar NKH019_19-2. Sample donated by Neiker, ES

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar NKH019_19-2


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar La_Perla. Sample donated by Solana, DE

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar La_Perla


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Jelly. Sample donated by Böhm-Nordkartoffel, DE

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Jelly


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Satina. Sample donated by Solana, DE

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Satina


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Folva. Sample donated by DANESPO, DK

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Folva


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Amado. Sample donated by Böhm-Nordkartoffel, DE

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Amado


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Marabel. Sample donated by Böhm-Nordkartoffel, DE

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Marabel


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Anuschka. Sample donated by Böhm-Nordkartoffel, DE

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Anuschka


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Milva. Sample donated by Böhm-Nordkartoffel, DE

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Milva


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Ambassador. Sample donated by Agrico, NL

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Ambassador


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Hopehely. Sample donated by Keszethely, HU

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Hopehely


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Aspirant. Sample donated by Comité Nord, FR

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Aspirant


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Novella. Sample donated by Agrico, NL

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Novella


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Celtiane. Sample donated by Bretagne Plants and Billant, FR

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Celtiane


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar 354-00-5. Sample donated by Comité Nord, FR

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar 354-00-5


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Toluca. Sample donated by Agrico, NL

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Toluca


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Coquine. Sample donated by Grocep, FR

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Coquine


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Denar. Sample donated by IHAR, PL

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Denar


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Luka_Luca. Sample donated by Keszethely, HU

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Luka_Luca


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Irys. Sample donated by IHAR, PL

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Irys


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Ceyenne. Sample donated by Grocep, FR

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Ceyenne


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Iledher. Sample donated by Grocep, FR

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Iledher


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Bila. Sample donated by IHAR, PL

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Bila


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Performer. Sample donated by Agrico, NL

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Performer


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Katica. Sample donated by Keszethely, HU

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Katica


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Jason. Sample donated by Comité Nord, FR

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Jason


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Gracja. Sample donated by IHAR, PL

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Gracja


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Ibis. Sample donated by IHAR, PL

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Ibis


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Irga. Sample donated by IHAR, PL

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Irga


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Bryza. Sample donated by IHAR, PL

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Bryza


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Dinky. Sample donated by Germicopa, FR

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Dinky


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Fabiana. Sample donated by Germicopa, FR

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Fabiana


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Yona. Sample donated by Germicopa, FR

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Yona


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Ditta. Sample donated by NÖS, AT

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Ditta


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Ackersegen. Sample donated by IPK (GLKS at Groß Lüsewitz), DE

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Ackersegen


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Jubel. Sample donated by IPK (GLKS at Groß Lüsewitz), DE

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Jubel


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Lumper. Sample donated by IPK (GLKS at Groß Lüsewitz), DE

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Lumper


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Magnum_Bonum. Sample donated by IPK (GLKS at Groß Lüsewitz), DE

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Magnum_Bonum


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Reichskanzler. Sample donated by IPK (GLKS at Groß Lüsewitz), DE

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Reichskanzler


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar Ultimus. Sample donated by AIT, AT (obtained from IPK at Groß Lüsewitz; DE)

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar Ultimus


text: MAX F. PERUTZ LABORATORIES

text: public

text: potato

text: NBS fragments isolated by amplification of potato cultivar 71_101_01. Sample donated by NORIKA, DE

text: Solanum tuberosum

text: Solanum tuberosum

text: NBS domains for cultivar 71_101_01


text: UNIVERSITY OF GLASGOW

text: public

tag: Namespace:UNIVERSITY OF GLASGOW

text: fruit fly

text: Drosophila melanogaster

text: Drosophila melanogaster

text: Male

text: Male Hindgut

characteristic: tissue lib

text: Hindgut

characteristic: tissue type


Mock Nanopore

text: TGAC

text: public

text: Mock Nanopore

text: human

text: HMP mock community HM-277D, Nanopore sequencing data

text: Homo sapiens

text: Homo sapiens

text: HMP Mock Community Nanopore


text: UNIVERSITY OF GLASGOW

text: public

text: fruit fly

text: Drosophila melanogaster

text: Drosophila melanogaster

text: Male

characteristic: sex

text: Male Midgut

text: Midgut


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GLASGOW

text: public

text: fruit fly

text: Drosophila melanogaster

text: Drosophila melanogaster

text: Male

text: Testis


text: Mouse brain

characteristic: ArrayExpress-PHENOTYPE

text: male

characteristic: ArrayExpress-SEX

text: Mus musculus

characteristic: ArrayExpress-SPECIES

text: SC

characteristic: INSDC last update

text: public

text: house mouse

text: Male

characteristic: gender

text: Mus musculus

text: Mouse brain

characteristic: phenotype

text: Mus musculus

characteristic: subject id


text: Mouse lung

text: male

text: Mus musculus

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: house mouse

text: Male

text: Mus musculus

characteristic: organism

text: Mouse lung

text: Mus musculus

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GLASGOW

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: fruit fly

characteristic: common name

text: Drosophila melanogaster

text: Drosophila melanogaster

text: Male

text: Male Tubule

characteristic: tissue lib

text: Malpighian Tubules


text: Mouse spleen

characteristic: ArrayExpress-PHENOTYPE

text: male

characteristic: ArrayExpress-SEX

text: Mus musculus

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

text: SC

text: public

text: house mouse

text: Male

text: Mus musculus

text: Mouse spleen

text: Mus musculus


text: Mouse liver

text: male

text: Mus musculus

text: SC

characteristic: INSDC last update

text: public

text: house mouse

text: Male

characteristic: gender

text: Mus musculus

text: Mouse liver

characteristic: phenotype

text: Mus musculus

characteristic: subject id


text: Mouse thymus

text: male

text: Mus musculus

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: house mouse

text: Male

text: Mus musculus

text: Mouse thymus

text: Mus musculus


text: Mouse kidney

text: male

text: Mus musculus

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: house mouse

text: Male

text: Mus musculus

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text: Mouse kidney

text: Mus musculus

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text: CARDIFF SCHOOL OF BIOSCIENCES

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:CARDIFF SCHOOL OF BIOSCIENCES

characteristic: collection date

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

characteristic: experimental factor

text: United Kingdom

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: miscellaneous natural or artificial environment

characteristic: miscellaneous environmental package

text: wood decay metagenome

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text: Illumina

characteristic: sequencing method

text: Vuilleminia comedens

characteristic: specific host

text: 16S rRNA genes from fungus-colonised wood blocks


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: United Kingdom

text: metagenome

text: wood decay metagenome

characteristic: organism

text: wood decay metagenome

text: Illumina

text: Hypholoma fasciculare


text: CARDIFF SCHOOL OF BIOSCIENCES

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: collection date

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

characteristic: experimental factor

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: metagenome

text: wood decay metagenome

text: wood decay metagenome

text: Illumina

characteristic: title


A

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: CARDIFF SCHOOL OF BIOSCIENCES

text: public

text: A

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

characteristic: miscellaneous environmental package

text: wood decay metagenome

characteristic: project name

text: wood decay metagenome

text: Illumina

characteristic: sequencing method


B

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CARDIFF SCHOOL OF BIOSCIENCES

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: B

characteristic: Submitter Id

text: United Kingdom

text: metagenome

text: wood decay metagenome

characteristic: organism

text: wood decay metagenome

text: Illumina


BETA

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characteristic: INSDC first public

text: public

text: BETA

characteristic: collection date

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

characteristic: experimental factor

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: metagenome

text: wood decay metagenome

text: wood decay metagenome

text: Illumina

text: Hypholoma fasciculare

characteristic: specific host

characteristic: title


C

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CARDIFF SCHOOL OF BIOSCIENCES

text: public

text: C

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

characteristic: miscellaneous environmental package

text: wood decay metagenome

characteristic: project name

text: wood decay metagenome

text: Illumina

characteristic: sequencing method


D

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text: CARDIFF SCHOOL OF BIOSCIENCES

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: D

characteristic: Submitter Id

characteristic: collection date

text: United Kingdom

text: metagenome

text: wood decay metagenome

characteristic: organism

text: wood decay metagenome

text: Illumina


E

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: CARDIFF SCHOOL OF BIOSCIENCES

text: public

text: E

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

characteristic: experimental factor

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: metagenome

text: wood decay metagenome

text: wood decay metagenome

text: Illumina

characteristic: title


F

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CARDIFF SCHOOL OF BIOSCIENCES

text: public

text: F

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

characteristic: miscellaneous environmental package

text: wood decay metagenome

characteristic: project name

text: wood decay metagenome

text: Illumina

characteristic: sequencing method


G

text: CARDIFF SCHOOL OF BIOSCIENCES

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: G

characteristic: Submitter Id

characteristic: collection date

text: United Kingdom

text: metagenome

text: wood decay metagenome

characteristic: organism

text: wood decay metagenome

text: Illumina


characteristic: ENA-CHECKLIST

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text: CARDIFF SCHOOL OF BIOSCIENCES

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characteristic: environment (biome)

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text: United Kingdom

characteristic: geographic location (country and/or sea)

text: metagenome

text: extraction kit metagenome

text: extraction kit metagenome

text: Illumina

text: extraction kit negative control

characteristic: title


Q

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CARDIFF SCHOOL OF BIOSCIENCES

text: public

text: Q

characteristic: experimental factor

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

characteristic: miscellaneous environmental package

text: wood decay metagenome

characteristic: project name

text: wood decay metagenome

text: Illumina

text: Trametes versicolor

characteristic: specific host


R

text: CARDIFF SCHOOL OF BIOSCIENCES

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

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characteristic: SRA accession

text: R

characteristic: Submitter Id

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text: United Kingdom

text: metagenome

text: wood decay metagenome

characteristic: organism

text: wood decay metagenome

text: Illumina

characteristic: sequencing method

text: Trametes versicolor


S

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CARDIFF SCHOOL OF BIOSCIENCES

text: public

text: S

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: metagenome

text: wood decay metagenome

text: wood decay metagenome

text: Illumina

text: Trametes versicolor

characteristic: title


T

text: CARDIFF SCHOOL OF BIOSCIENCES

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: T

characteristic: experimental factor

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

characteristic: miscellaneous environmental package

text: wood decay metagenome

characteristic: project name

text: wood decay metagenome

text: Illumina

text: Trametes versicolor

characteristic: specific host


W

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: CARDIFF SCHOOL OF BIOSCIENCES

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: W

characteristic: Submitter Id

characteristic: collection date

text: United Kingdom

text: metagenome

text: wood decay metagenome

characteristic: organism

text: wood decay metagenome

text: Illumina

characteristic: sequencing method

text: Trametes versicolor


X

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CARDIFF SCHOOL OF BIOSCIENCES

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: X

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: metagenome

text: wood decay metagenome

text: wood decay metagenome

text: Illumina

text: Hypholoma fasciculare

characteristic: title


Y

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: CARDIFF SCHOOL OF BIOSCIENCES

text: public

text: Y

characteristic: experimental factor

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

characteristic: miscellaneous environmental package

text: wood decay metagenome

characteristic: project name

text: wood decay metagenome

text: Illumina

text: Hypholoma fasciculare

characteristic: specific host


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Laboratory of Genetics - Gage The Salk Institute for Biological Studies

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: neuronal stem cell

characteristic: cell type

text: human

characteristic: common name

text: Protocols: We first used fluorescence-activated cell sorting (FACS) to purify a homogeneous population of NSCs (D0) based on the expression of the cell-surface markers CD184+/CD271-/CD44-/CD24-/CD15+. To trace ASD and control neurons over time, we performed a series of retroviral lineage-tracing experiments to trace the progenies of dividing NSCs using a retroviral vector expressing a membrane-tagged enhanced green fluorescent protein (eGFP) (CAG::LckN-eGFP). As differentiating neurons express PSA-NCAM on the cell surface, we established a FACS-based protocol for purification of defined subpopulations of retrovirally labeled eGFP+/PSA-NCAM+ double-positive neurons after 2, 4, 7 and 14 (D2, 4, 7 and 14) days of differentiation. IPSCs were sorted based on the expression of SSEA-4 and TRA1-81 and maturing iPSC-iNs were collected at the indicated days after induction by sorting for eGFP (indicative for the Ngn2 transgene)- and PSA-NCAM-positive cells. NSC-derived neurons: We differentiated iPSCs into NSCs by following a default differentiation protocol. Briefly, iPSC colonies were detached by collagenase (Gibco) to form embryoid bodies (EBs) and then cultured in suspension in the presence of 1 μM dorsomorphin (Cayman Chemical). After floating for seven days, EBs were attached on poly-ornithine (10 μg/ml, Life Technologies) and laminin (5 μg/ml, Life Technologies) coated surfaces. At day 16, emerging rosette colonies were manually detached, gently dissociated with accutase (Innovative Cell Technologies) and plated as NSC monolayers onto coated dishes for further neuronal differentiation. We first used fluorescence-activated cell sorting (FACS) to purify a homogeneous population of NSCs based on the expression of the cell-surface markers CD184+/CD271-/CD44-/CD24-/CD15+. To trace ASD and control neurons over time, we performed a series of retroviral lineage-tracing experiments to trace the progenies of dividing NSCs using a retroviral vector expressing a membrane-tagged enhanced green fluorescent protein (eGFP) (CAG::LckN-eGFP). Briefly, the sequence of the membrane localization domain from Lck (LckN) was linked to the eGFP sequence and cloned into the Moloney Murine Leukemia Virus (MMLV)-based retroviral plasmid resulting in pRV-CAG:LckN-eGFP (CAG:LckN-eGFP). As differentiating neurons express PSA-NCAM on the cell surface, we established a FACS-based protocol for purification of defined subpopulations of retrovirally labeled eGFP+/PSA-NCAM+ double-positive neurons after 2, 4, 7 and 14 days of differentiation. NSCs and maturing neuron cultures as well as iPSCs and iPSC-iNs were detached using accutase (Innovative Cell Technologies) and then washed and stained with fluorophore-coupled antibodies (Extended Data Table 11) for 45 min at 4ºC in phosphate buffered saline (PBS). Cells were washed, suspended in PBS and filtered using a 40-μm cell strainer. The desired cell populations were sorted directly into Trizol-LS (Life Technologies). RNA was isolated according to the manufacturer’s instructions and subsequently digested with TURBO DNase to remove trace quantities of DNA (ambion, Life Technologies). Before RNA-seq library preparation, assessment of RNA integrity numbers (RIN) was performed using the Agilent TapeStation. Libraries were prepared using the TruSeq Stranded mRNA Sample Prep Kit according to the manufacturer’s instructions (Illumina).

characteristic: description

text: autism spectrum disorder

characteristic: disease

text: pRV-CAG:LckN-eGFP

characteristic: genotype

text: Able

characteristic: individual

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: skin

characteristic: organism part

characteristic: phenotype

text: induced pluripotent stem cell

characteristic: progenitor cell type

text: Homo sapiens

unit: day

characteristic: time


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Laboratory of Genetics - Gage The Salk Institute for Biological Studies

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ArrayExpress

text: neuronal stem cell

text: human

text: autism spectrum disorder

text: pRV-CAG:LckN-eGFP

text: Acai

text: Homo sapiens

text: Homo sapiens

text: skin

text: induced pluripotent stem cell

text: Homo sapiens

characteristic: title


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: neuronal stem cell

characteristic: cell type

text: human

characteristic: common name

text: autism spectrum disorder

text: pRV-CAG:LckN-eGFP

text: Aero

text: Homo sapiens

text: Homo sapiens

text: skin

text: induced pluripotent stem cell

text: Homo sapiens


text: public

text: ArrayExpress

text: neuronal stem cell

text: human

characteristic: description

text: autism spectrum disorder

characteristic: disease

text: pRV-CAG:LckN-eGFP

characteristic: genotype

text: Agua

characteristic: individual

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: skin

characteristic: organism part

characteristic: phenotype

text: induced pluripotent stem cell

text: Homo sapiens


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text: Homo sapiens

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text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: skin

text: induced pluripotent stem cell

text: Homo sapiens


characteristic: ENA-CHECKLIST

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characteristic: INSDC center name

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text: ArrayExpress

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text: human

text: autism spectrum disorder

text: pRV-CAG:LckN-eGFP

text: Avid

text: Homo sapiens

text: Homo sapiens

text: skin

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characteristic: phenotype

text: induced pluripotent stem cell

text: Homo sapiens


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

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text: normal

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text: Cent

text: Homo sapiens

text: Homo sapiens

text: skin

text: induced pluripotent stem cell

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text: Homo sapiens

characteristic: time


text: public

text: ArrayExpress

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text: Homo sapiens

text: Homo sapiens

text: skin

text: induced pluripotent stem cell

text: Homo sapiens

characteristic: title


characteristic: ENA-CHECKLIST

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text: ArrayExpress

text: neuronal stem cell

text: human

text: normal

text: pRV-CAG:LckN-eGFP

text: Clay

characteristic: individual

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: skin

text: induced pluripotent stem cell

text: Homo sapiens


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: neuronal stem cell

text: human

text: normal

text: pRV-CAG:LckN-eGFP

text: Clue

text: Homo sapiens

text: Homo sapiens

text: skin

characteristic: organism part

characteristic: phenotype

text: induced pluripotent stem cell

text: Homo sapiens


text: public

text: ArrayExpress

characteristic: broker name

text: neuronal stem cell

characteristic: cell type

text: human

characteristic: common name

characteristic: description

text: normal

characteristic: disease

text: pRV-CAG:LckN-eGFP

text: Cove

text: Homo sapiens

text: Homo sapiens

text: skin

text: induced pluripotent stem cell

characteristic: progenitor cell type

text: Homo sapiens

characteristic: time


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: ArrayExpress

text: neuron

text: human

text: autism spectrum disorder

text: pRV-CAG:LckN-eGFP

characteristic: genotype

text: Able

text: Homo sapiens

text: Homo sapiens

text: skin

text: neuronal stem cell

text: Homo sapiens

characteristic: title


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: neuron

text: human

text: Protocols: We first used fluorescence-activated cell sorting (FACS) to purify a homogeneous population of NSCs (D0) based on the expression of the cell-surface markers CD184+/CD271-/CD44-/CD24-/CD15+. To trace ASD and control neurons over time, we performed a series of retroviral lineage-tracing experiments to trace the progenies of dividing NSCs using a retroviral vector expressing a membrane-tagged enhanced green fluorescent protein (eGFP) (CAG::LckN-eGFP). As differentiating neurons express PSA-NCAM on the cell surface, we established a FACS-based protocol for purification of defined subpopulations of retrovirally labeled eGFP+/PSA-NCAM+ double-positive neurons after 2, 4, 7 and 14 (D2, 4, 7 and 14) days of differentiation. IPSCs were sorted based on the expression of SSEA-4 and TRA1-81 and maturing iPSC-iNs were collected at the indicated days after induction by sorting for eGFP (indicative for the Ngn2 transgene)- and PSA-NCAM-positive cells. Induced iPSC neurons (iPSC-iNs): The cell surface markers SSEA4+ and TRA1-81+ were used for FACS-based purification of iPSCs. For iPSC-iNs, the human cDNA sequence for Ngn2 and the sequence for eGFP were linked by a 2A sequence and cloned into the tet-inducible pLV-XTP backbone (Clonetech). IPSCs were transduced with lentiviral particles for pLV-X-UbC:TetOn (UtO) and pLV-X-Ngn2:2A:eGFP (N2AG) and were selected in the presence of puromycin (0.5 μg/ml, Sigma Aldrich) and G418 (100 μg/ml, Life technologies). For iPSC-iN conversion, iPSCs were transferred into PluriPro monolayer conditions (Cell Guidance Systems) and, 24 hrs after plating, were induced with doxycycline (2 μg/ml: Sigma Aldrich) for two days. For further maturation, iNs were switched to Neuron Maturation Media (NMM) based on DMEM:F12/Neurobasal (both Gibco) (1:1) as used for directed differentiation. NMM contains the following supplements: N2 supplement (1x, Gibco), B27 supplement (1x, Gibco), Laminin (1 μg/ml, Life Technologies) and doxycycline (2 μg/ml: Sigma Aldrich). Medium was changed every other day. Differentiating iPSC-iNs were purified by gating on eGFP+/PSA-NCAM+ neurons at 3, 7 and 14 days after conversion. NSCs and maturing neuron cultures as well as iPSCs and iPSC-iNs were detached using accutase (Innovative Cell Technologies) and then washed and stained with fluorophore-coupled antibodies (Extended Data Table 11) for 45 min at 4ºC in phosphate buffered saline (PBS). Cells were washed, suspended in PBS and filtered using a 40-μm cell strainer. The desired cell populations were sorted directly into Trizol-LS (Life Technologies). RNA was isolated according to the manufacturer’s instructions and subsequently digested with TURBO DNase to remove trace quantities of DNA (ambion, Life Technologies). Before RNA-seq library preparation, assessment of RNA integrity numbers (RIN) was performed using the Agilent TapeStation. Libraries were prepared using the TruSeq Stranded mRNA Sample Prep Kit according to the manufacturer’s instructions (Illumina).

text: autism spectrum disorder

text: pLV-X-Ngn2-2A-eGFP (N2AG)

text: Able

characteristic: individual

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: skin

text: induced pluripotent stem cell

text: Homo sapiens


text: public

text: ArrayExpress

characteristic: broker name

text: neuron

characteristic: cell type

text: human

characteristic: common name

characteristic: description

text: autism spectrum disorder

characteristic: disease

text: pRV-CAG:LckN-eGFP

text: Acai

text: Homo sapiens

text: Homo sapiens

text: skin

characteristic: organism part

characteristic: phenotype

text: neuronal stem cell

text: Homo sapiens


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: ArrayExpress

text: neuron

text: human

text: autism spectrum disorder

text: pLV-X-Ngn2-2A-eGFP (N2AG)

text: Acai

text: Homo sapiens

text: Homo sapiens

text: skin

text: induced pluripotent stem cell

characteristic: progenitor cell type

text: Homo sapiens

characteristic: time


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: neuron

text: human

text: autism spectrum disorder

text: pRV-CAG:LckN-eGFP

characteristic: genotype

text: Aero

text: Homo sapiens

text: Homo sapiens

text: skin

text: neuronal stem cell

text: Homo sapiens

characteristic: title