characteristic: External Id

text: public

characteristic: SRA accession

tag: Namespace:UCL Cancer Institute, University College London, London, WC1E 6BT, United Kingdom

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: fruit fly

characteristic: common name

text: Protocols: Kc167 and S2R+ cells (obtained from the Drosophila Genomics Resource Centre [DGRC]) were grown in Schneiders Insect Cell Medium (GIBCO) supplemented with 10% FBS (Sigma) and 1% penicillin/streptomycin (Thermoscientific). Cell lines were kept at 25C. For Groucho knockdown, cells were transfected with dsRNA against the 3UTR of Gro. Transfections were performed using Effectene according to manufacturers instructions (Qiagen). 1 microgram of dsRNA was transfected per 1-3 x 10^6 cells. Successfully transfected cells were processed six days post transfection. Approximately 5-7 x 10^7 cells were fixed at room temperature by incubation with 1% formaldehyde for ten minutes. The fixation reaction was quenched with 200mM Glycine after which cells were washed three times with 1x Phosphate Buffered Saline (1xPBS). This was followed by a ten-minute lysis on ice (Nuclear Lysis Buffer: 50mM Tris-HCL (pH 8.1), 10mM EDTA, 1% SDS, 1xRoche Complete Inhibitor) and the addition of 1.6 volumes of IP Dilution Buffer (20mM Tris-HCL (pH 8.1), 150mM NaCl, 2mM EDTA, 1% TritonX-100, 0.01% SDS, 1xRoche Complete Inhibitor). Chromatin released from lysates was fragmented to a range of 200 to 1000bp using a Diagenode Bioruptor set for 20 pulses (30 seconds ON, 30 seconds OFF). Fragmented chromatin was further diluted (five-fold) in IP dilution buffer and precleared for 3-5 hours with Protein G PLUS-Agarose beads and 3 mg of normal rabbit IgG (Insight Biotechnology and New England Biolabs). Following this precleared chromatin was either snap-frozen and stored at -80C or immediately used for ChIP. For each ChIP experiment an aliquot of chromatin deriving from approximately 1 x 107 cells was used. An aliquot of chromatin was set aside to use as an input control. ChIP samples were treated with the appropriate concentration of an antibody along with Protein G PLUS-Agarose beads and kept on a rocker at 4C overnight. After immunoprecipitation the beads were subjected to a wash with IP Dilution Buffer and two washes each with IP Wash Buffers 1 and 2 (IP Wash Buffer 1: 20mM Tris-HCL (pH 8.1), 50mM NaCl, 2mM EDTA, 1% TritonX-100, 0.1% SDS; IP Wash Buffer 2: 10mM Tris-HCl (pH 8.1), 250mM LiCl, 1mM EDTA, 1% NP-40, 1% deoxycholic acid)). They were finally washed with TE Buffer before bound chromatin-protein complexes were eluted (IP Elution Buffer: 100mM NaHCO3, 1% SDS). Eluted complexes were treated with RNase A (Invitrogen) at 37C for an hour to eliminate RNA, 180mM NaCl at 65C for 4-6 hours to reverse crosslinks, and Proteinase K (Roche) at 45C overnight to remove proteins. The aliquot kept aside as input was subjected to the same treatment. Purified DNA for ChIP and input was obtained by phenol-chloroform extraction and ethanol precipitation. The concentration of ChIP and Input DNA was checked on the Qubit fluorometer (Invitrogen). Approximately 20-50ng of the purified ChIP and Input DNA was used to generate ChIP libraries using either the NEBnext ChIP-Seq Library Prep Master Mix Kit (E6240S) or the NEBNext Ultra DNA Library Prep Kit (E7370S) according to manufacturers instructions. Adaptor-ligated DNA was amplified with 15 cycles of PCR and fragments of 250-350 bp selected by agarose gel extraction. Resulting libraries were assessed for concentration and size using the Qubit fluorometer and the Agilent2100 Bioanalyzer.

text: transfection

text: gro RNA

text: Drosophila melanogaster

text: Drosophila melanogaster

text: Drosophila melanogaster

characteristic: title


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCL Cancer Institute, University College London, London, WC1E 6BT, United Kingdom

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: fruit fly

text: Protocols: Kc167 and S2R+ cells (obtained from the Drosophila Genomics Resource Centre [DGRC]) were grown in Schneiders Insect Cell Medium (GIBCO) supplemented with 10% FBS (Sigma) and 1% penicillin/streptomycin (Thermoscientific). Cell lines were kept at 25C. For Groucho oligomerization experiments cells were cotransfected with dsRNA against the 3UTR of Gro as well as plasmids containing either Gro-GFP or GroL38D;L87D-GFP. Transfections were performed using Effectene according to manufacturers instructions (Qiagen). 300-600ng DNA and 1 microgram of dsRNA were cotransfected per 1-3 x 10^6 cells. Successfully transfected cells were processed six days post transfection. Approximately 5-7 x 10^7 cells were fixed at room temperature. For Gro and GFP ChIP experiments cells were double crosslinked by incubation with Disuccininmidyl glutarate (DSG-Fisher Scientific; 2mM) for 20 minutes on a rocker followed by treatment with 1% formaldehyde for ten minutes. The fixation reaction was quenched with 200mM Glycine after which cells were washed three times with 1x Phosphate Buffered Saline (1xPBS). This was followed by a ten-minute lysis on ice (Nuclear Lysis Buffer: 50mM Tris-HCL (pH 8.1), 10mM EDTA, 1% SDS, 1xRoche Complete Inhibitor) and the addition of 1.6 volumes of IP Dilution Buffer (20mM Tris-HCL (pH 8.1), 150mM NaCl, 2mM EDTA, 1% TritonX-100, 0.01% SDS, 1xRoche Complete Inhibitor). Chromatin released from lysates was fragmented to a range of 200 to 1000bp using a Diagenode Bioruptor set for 20 pulses (30 seconds ON, 30 seconds OFF). Fragmented chromatin was further diluted (five-fold) in IP dilution buffer and precleared for 3-5 hours with Protein G PLUS-Agarose beads and 3 micrograms of normal rabbit IgG (Insight Biotechnology and New England Biolabs). Following this precleared chromatin was either snap-frozen and stored at -80C or immediately used for ChIP. For each ChIP experiment an aliquot of chromatin deriving from approximately 1 x 107 cells was used. An aliquot of chromatin was set aside to use as an input control. ChIP samples were treated with the appropriate concentration of an antibody along with Protein G PLUS-Agarose beads and kept on a rocker at 4C overnight. After immunoprecipitation the beads were subjected to a wash with IP Dilution Buffer and two washes each with IP Wash Buffers 1 and 2 (IP Wash Buffer 1: 20mM Tris-HCL (pH 8.1), 50mM NaCl, 2mM EDTA, 1% TritonX-100, 0.1% SDS; IP Wash Buffer 2: 10mM Tris-HCl (pH 8.1), 250mM LiCl, 1mM EDTA, 1% NP-40, 1% deoxycholic acid)). They were finally washed with TE Buffer before bound chromatin-protein complexes were eluted (IP Elution Buffer: 100mM NaHCO3, 1% SDS). Eluted complexes were treated with RNase A (Invitrogen) at 37C for an hour to eliminate RNA, 180mM NaCl at 65C for 4-6 hours to reverse crosslinks, and Proteinase K (Roche) at 45C overnight to remove proteins. The aliquot kept aside as input was subjected to the same treatment. Purified DNA for ChIP and input was obtained by phenol-chloroform extraction and ethanol precipitation. The concentration of ChIP and Input DNA was checked on the Qubit fluorometer (Invitrogen). Approximately 20-50ng of the purified ChIP and Input DNA was used to generate ChIP libraries using either the NEBnext ChIP-Seq Library Prep Master Mix Kit (E6240S) or the NEBNext Ultra DNA Library Prep Kit (E7370S) according to manufacturers instructions. Adaptor-ligated DNA was amplified with 15 cycles of PCR and fragments of 250-350 bp selected by agarose gel extraction. Resulting libraries were assessed for concentration and size using the Qubit fluorometer and the Agilent2100 Bioanalyzer.

characteristic: description

text: transfection

characteristic: genetic modification

text: gro38,87-GFP and gro RNA

characteristic: genotype

text: Drosophila melanogaster

characteristic: organism

text: Drosophila melanogaster

text: Drosophila melanogaster

type: has member


characteristic: External Id

text: public

characteristic: SRA accession

text: ArrayExpress

text: fruit fly

text: transfection

text: gro38,87-GFP and gro RNA

text: Drosophila melanogaster

text: Drosophila melanogaster

text: Drosophila melanogaster

text: Input-GFP


text: public

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: fruit fly

text: Protocols: Kc167 and S2R+ cells (obtained from the Drosophila Genomics Resource Centre [DGRC]) were grown in Schneiders Insect Cell Medium (GIBCO) supplemented with 10% FBS (Sigma) and 1% penicillin/streptomycin (Thermoscientific). Cell lines were kept at 25C. They were grown to approximately 70% confluence prior to treatment. Approximately 5-7 x 10^7 cells were fixed at room temperature by incubation with 1% formaldehyde for ten minutes. The fixation reaction was quenched with 200mM Glycine after which cells were washed three times with 1x Phosphate Buffered Saline (1xPBS). This was followed by a ten-minute lysis on ice (Nuclear Lysis Buffer: 50mM Tris-HCL (pH 8.1), 10mM EDTA, 1% SDS, 1xRoche Complete Inhibitor) and the addition of 1.6 volumes of IP Dilution Buffer (20mM Tris-HCL (pH 8.1), 150mM NaCl, 2mM EDTA, 1% TritonX-100, 0.01% SDS, 1xRoche Complete Inhibitor). Chromatin released from lysates was fragmented to a range of 200 to 1000bp using a Diagenode Bioruptor set for 20 pulses (30 seconds ON, 30 seconds OFF). Fragmented chromatin was further diluted (five-fold) in IP dilution buffer and precleared for 3-5 hours with Protein G PLUS-Agarose beads and 3 mg of normal rabbit IgG (Insight Biotechnology and New England Biolabs). Following this precleared chromatin was either snap-frozen and stored at -80C or immediately used for ChIP. For each ChIP experiment an aliquot of chromatin deriving from approximately 1 x 107 cells was used. An aliquot of chromatin was set aside to use as an input control. ChIP samples were treated with the appropriate concentration of an antibody along with Protein G PLUS-Agarose beads and kept on a rocker at 4C overnight. After immunoprecipitation the beads were subjected to a wash with IP Dilution Buffer and two washes each with IP Wash Buffers 1 and 2 (IP Wash Buffer 1: 20mM Tris-HCL (pH 8.1), 50mM NaCl, 2mM EDTA, 1% TritonX-100, 0.1% SDS; IP Wash Buffer 2: 10mM Tris-HCl (pH 8.1), 250mM LiCl, 1mM EDTA, 1% NP-40, 1% deoxycholic acid)). They were finally washed with TE Buffer before bound chromatin-protein complexes were eluted (IP Elution Buffer: 100mM NaHCO3, 1% SDS). Eluted complexes were treated with RNase A (Invitrogen) at 37C for an hour to eliminate RNA, 180mM NaCl at 65C for 4-6 hours to reverse crosslinks, and Proteinase K (Roche) at 45C overnight to remove proteins. The aliquot kept aside as input was subjected to the same treatment. Purified DNA for ChIP and input was obtained by phenol-chloroform extraction and ethanol precipitation. The concentration of ChIP and Input DNA was checked on the Qubit fluorometer (Invitrogen). Approximately 20-50ng of the purified ChIP and Input DNA was used to generate ChIP libraries using either the NEBnext ChIP-Seq Library Prep Master Mix Kit (E6240S) or the NEBNext Ultra DNA Library Prep Kit (E7370S) according to manufacturers instructions. Adaptor-ligated DNA was amplified with 15 cycles of PCR and fragments of 250-350 bp selected by agarose gel extraction. Resulting libraries were assessed for concentration and size using the Qubit fluorometer and the Agilent2100 Bioanalyzer.

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: Drosophila melanogaster


text: public

text: ArrayExpress

characteristic: cell line

text: fruit fly

characteristic: common name

text: transfection

text: gro-GFP and gro RNA

text: Drosophila melanogaster

text: Drosophila melanogaster

text: Drosophila melanogaster


characteristic: ENA-CHECKLIST

text: public

text: ArrayExpress

text: fruit fly

text: transfection

text: gro RNA

text: Drosophila melanogaster

text: Drosophila melanogaster

text: Drosophila melanogaster

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: ArrayExpress

text: fruit fly

text: Protocols: Kc167 and S2R+ cells (obtained from the Drosophila Genomics Resource Centre [DGRC]) were grown in Schneiders Insect Cell Medium (GIBCO) supplemented with 10% FBS (Sigma) and 1% penicillin/streptomycin (Thermoscientific). Cell lines were kept at 25C. For Groucho knockdown, cells were transfected with dsRNA against the 3UTR of Gro. Transfections were performed using Effectene according to manufacturers instructions (Qiagen). 1 microgram of dsRNA was transfected per 1-3 x 10^6 cells. Successfully transfected cells were processed six days post transfection. Approximately 5-7 x 10^7 cells were fixed at room temperature. For Gro and GFP ChIP experiments cells were double crosslinked by incubation with Disuccininmidyl glutarate (DSG-Fisher Scientific; 2mM) for 20 minutes on a rocker followed by treatment with 1% formaldehyde for ten minutes. The fixation reaction was quenched with 200mM Glycine after which cells were washed three times with 1x Phosphate Buffered Saline (1xPBS). This was followed by a ten-minute lysis on ice (Nuclear Lysis Buffer: 50mM Tris-HCL (pH 8.1), 10mM EDTA, 1% SDS, 1xRoche Complete Inhibitor) and the addition of 1.6 volumes of IP Dilution Buffer (20mM Tris-HCL (pH 8.1), 150mM NaCl, 2mM EDTA, 1% TritonX-100, 0.01% SDS, 1xRoche Complete Inhibitor). Chromatin released from lysates was fragmented to a range of 200 to 1000bp using a Diagenode Bioruptor set for 20 pulses (30 seconds ON, 30 seconds OFF). Fragmented chromatin was further diluted (five-fold) in IP dilution buffer and precleared for 3-5 hours with Protein G PLUS-Agarose beads and 3 micrograms of normal rabbit IgG (Insight Biotechnology and New England Biolabs). Following this precleared chromatin was either snap-frozen and stored at -80C or immediately used for ChIP. For each ChIP experiment an aliquot of chromatin deriving from approximately 1 x 107 cells was used. An aliquot of chromatin was set aside to use as an input control. ChIP samples were treated with the appropriate concentration of an antibody along with Protein G PLUS-Agarose beads and kept on a rocker at 4C overnight. After immunoprecipitation the beads were subjected to a wash with IP Dilution Buffer and two washes each with IP Wash Buffers 1 and 2 (IP Wash Buffer 1: 20mM Tris-HCL (pH 8.1), 50mM NaCl, 2mM EDTA, 1% TritonX-100, 0.1% SDS; IP Wash Buffer 2: 10mM Tris-HCl (pH 8.1), 250mM LiCl, 1mM EDTA, 1% NP-40, 1% deoxycholic acid)). They were finally washed with TE Buffer before bound chromatin-protein complexes were eluted (IP Elution Buffer: 100mM NaHCO3, 1% SDS). Eluted complexes were treated with RNase A (Invitrogen) at 37C for an hour to eliminate RNA, 180mM NaCl at 65C for 4-6 hours to reverse crosslinks, and Proteinase K (Roche) at 45C overnight to remove proteins. The aliquot kept aside as input was subjected to the same treatment. Purified DNA for ChIP and input was obtained by phenol-chloroform extraction and ethanol precipitation. The concentration of ChIP and Input DNA was checked on the Qubit fluorometer (Invitrogen). Approximately 20-50ng of the purified ChIP and Input DNA was used to generate ChIP libraries using either the NEBnext ChIP-Seq Library Prep Master Mix Kit (E6240S) or the NEBNext Ultra DNA Library Prep Kit (E7370S) according to manufacturers instructions. Adaptor-ligated DNA was amplified with 15 cycles of PCR and fragments of 250-350 bp selected by agarose gel extraction. Resulting libraries were assessed for concentration and size using the Qubit fluorometer and the Agilent2100 Bioanalyzer.

text: transfection

text: gro RNA

text: Drosophila melanogaster

text: Drosophila melanogaster

text: Drosophila melanogaster


characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ArrayExpress

text: fruit fly

text: Protocols: Kc167 and S2R+ cells (obtained from the Drosophila Genomics Resource Centre [DGRC]) were grown in Schneiders Insect Cell Medium (GIBCO) supplemented with 10% FBS (Sigma) and 1% penicillin/streptomycin (Thermoscientific). Cell lines were kept at 25C. They were grown to approximately 70% confluence prior to treatment. Approximately 5-7 x 10^7 cells were fixed at room temperature. For Gro and GFP ChIP experiments cells were double crosslinked by incubation with Disuccininmidyl glutarate (DSG-Fisher Scientific; 2mM) for 20 minutes on a rocker followed by treatment with 1% formaldehyde for ten minutes. The fixation reaction was quenched with 200mM Glycine after which cells were washed three times with 1x Phosphate Buffered Saline (1xPBS). This was followed by a ten-minute lysis on ice (Nuclear Lysis Buffer: 50mM Tris-HCL (pH 8.1), 10mM EDTA, 1% SDS, 1xRoche Complete Inhibitor) and the addition of 1.6 volumes of IP Dilution Buffer (20mM Tris-HCL (pH 8.1), 150mM NaCl, 2mM EDTA, 1% TritonX-100, 0.01% SDS, 1xRoche Complete Inhibitor). Chromatin released from lysates was fragmented to a range of 200 to 1000bp using a Diagenode Bioruptor set for 20 pulses (30 seconds ON, 30 seconds OFF). Fragmented chromatin was further diluted (five-fold) in IP dilution buffer and precleared for 3-5 hours with Protein G PLUS-Agarose beads and 3 micrograms of normal rabbit IgG (Insight Biotechnology and New England Biolabs). Following this precleared chromatin was either snap-frozen and stored at -80C or immediately used for ChIP. For each ChIP experiment an aliquot of chromatin deriving from approximately 1 x 107 cells was used. An aliquot of chromatin was set aside to use as an input control. ChIP samples were treated with the appropriate concentration of an antibody along with Protein G PLUS-Agarose beads and kept on a rocker at 4C overnight. After immunoprecipitation the beads were subjected to a wash with IP Dilution Buffer and two washes each with IP Wash Buffers 1 and 2 (IP Wash Buffer 1: 20mM Tris-HCL (pH 8.1), 50mM NaCl, 2mM EDTA, 1% TritonX-100, 0.1% SDS; IP Wash Buffer 2: 10mM Tris-HCl (pH 8.1), 250mM LiCl, 1mM EDTA, 1% NP-40, 1% deoxycholic acid)). They were finally washed with TE Buffer before bound chromatin-protein complexes were eluted (IP Elution Buffer: 100mM NaHCO3, 1% SDS). Eluted complexes were treated with RNase A (Invitrogen) at 37C for an hour to eliminate RNA, 180mM NaCl at 65C for 4-6 hours to reverse crosslinks, and Proteinase K (Roche) at 45C overnight to remove proteins. The aliquot kept aside as input was subjected to the same treatment. Purified DNA for ChIP and input was obtained by phenol-chloroform extraction and ethanol precipitation. The concentration of ChIP and Input DNA was checked on the Qubit fluorometer (Invitrogen). Approximately 20-50ng of the purified ChIP and Input DNA was used to generate ChIP libraries using either the NEBnext ChIP-Seq Library Prep Master Mix Kit (E6240S) or the NEBNext Ultra DNA Library Prep Kit (E7370S) according to manufacturers instructions. Adaptor-ligated DNA was amplified with 15 cycles of PCR and fragments of 250-350 bp selected by agarose gel extraction. Resulting libraries were assessed for concentration and size using the Qubit fluorometer and the Agilent2100 Bioanalyzer.

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: Drosophila melanogaster


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: fruit fly

text: Protocols: Kc167 and S2R+ cells (obtained from the Drosophila Genomics Resource Centre [DGRC]) were grown in Schneiders Insect Cell Medium (GIBCO) supplemented with 10% FBS (Sigma) and 1% penicillin/streptomycin (Thermoscientific). Cell lines were kept at 25C. They were grown to approximately 70% confluence prior to treatment. For RNA-seq experiments total RNA was obtained from approximately 5 x 10^6 cells per sample using the Qiagen RNeasy mini kit. mRNA was then extracted using the Dynabeads mRNA Purification Kit (Life Technologies). 50-250 ng of mRNA was used to generate an mRNA library following manufacturers instructions (NEBnext mRNA Library Prep Master Mix E6110S). cDNA fragments of 250-350 bp were selected by agarose gel extraction and amplified with 12 cycles of PCR. Resulting libraries were assessed for concentration and size using the Qubit fluorometer and the Agilent2100 Bioanalyzer.

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: Drosophila melanogaster


text: public

text: ArrayExpress

text: fruit fly

characteristic: description

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: Drosophila melanogaster

text: RNAseq-wildtype


text: public

text: ArrayExpress

text: fruit fly

text: Protocols: Kc167 and S2R+ cells (obtained from the Drosophila Genomics Resource Centre [DGRC]) were grown in Schneiders Insect Cell Medium (GIBCO) supplemented with 10% FBS (Sigma) and 1% penicillin/streptomycin (Thermoscientific). Cell lines were kept at 25C. For Groucho knockdown, cells were transfected with dsRNA against the 3UTR of Gro. Transfections were performed using Effectene according to manufacturers instructions (Qiagen). 1 microgram of dsRNA was transfected per 1-3 x 10^6 cells. Successfully transfected cells were processed six days post transfection. For RNA-seq experiments total RNA was obtained from approximately 5 x 10^6 cells per sample using the Qiagen RNeasy mini kit. mRNA was then extracted using the Dynabeads mRNA Purification Kit (Life Technologies). 50-250 ng of mRNA was used to generate an mRNA library following manufacturers instructions (NEBnext mRNA Library Prep Master Mix E6110S). cDNA fragments of 250-350 bp were selected by agarose gel extraction and amplified with 12 cycles of PCR. Resulting libraries were assessed for concentration and size using the Qubit fluorometer and the Agilent2100 Bioanalyzer.

text: transfection

characteristic: genetic modification

text: gro RNA

characteristic: genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: Drosophila melanogaster

text: RNAseq-RNAigro


characteristic: External Id

text: public

text: ArrayExpress

text: fruit fly

text: wild type genotype

text: Drosophila melanogaster

characteristic: organism

text: Drosophila melanogaster

text: Drosophila melanogaster

text: Input-gro


text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: fruit fly

text: transfection

text: gro RNA

text: Drosophila melanogaster

text: Drosophila melanogaster

text: Drosophila melanogaster


text: Mus Musculus

characteristic: ArrayExpress-Species

text: SC

text: public

text: house mouse

text: Mus musculus

text: DNA from MEF

characteristic: sample description

text: Mus musculus


text: female

characteristic: ArrayExpress-Sex

text: Mus Musculus

characteristic: ENA-CHECKLIST

text: SC

text: public

text: house mouse

characteristic: common name

text: Mus musculus

text: DNA from MEF

text: Mus musculus


text: female

text: Mus Musculus

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: house mouse

text: Mus musculus

text: DNA from ESC

text: Mus musculus


text: female

text: Mus Musculus

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: house mouse

text: Mus musculus

text: DNA from iPSC

text: Mus musculus


text: Cambridge Institute

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:Cambridge Institute

text: ArrayExpress

characteristic: broker name

text: house mouse

text: Protocols: C57BL/6J mice were bred and housed under UK Home Office licensing husbandry standards. After breeding, mice were observed for plugs. Morning of day when plug was first observed was counted as day E0. Samples were prepared by direct perfusion of the liver with buffered salt solution. Brain and liver tissues were minzed and fresh-frozen in liquid nitrogen. Total RNA was extracted from liver and brain tissues of all developmental stages. Excise 25 mg liver and brain tissue sample (on dry ice) into Precellys tubes CK28-R, bertin technology. Remove the sample tube from the dry ice and follow the instructions of the RNeasy Min Kit (Qiagen). Add Lysis Reagent into each sample tube. Homogenize immediately on the TissueLyser for 2x10 5000 with 10 break. After pure RNA is obtained (RNeasy Min Kit (Qiagen) instruction), Turbo DNAse treat (Ambion AM1907) 10ug total RNA, 1/10th volume DNase buffer (10ul), Turbo DNase enzyme (2ul), Water (to 100ul) Incubate 37C 30 minutes (mix inactivation agent) 0.15 volume inactivation agent (15ul). Ribosomal RNA of 5 ug of DNase-treated total RNA was removed using the RiboZero (Epicentre RZC110424) kit following manufacturer's instructions. First Strand cDNA synthesis was performed using the Invitrogen it (11917-010) following manufacturer's instructions. Second strand cDNA synthesis was done by using a 10mM dUTP mix (Promega U1335) (dATP, dCTP, dGTP, dUTP). Make up reaction on ice Volume cDNA from step 3 50ul 5x FSS buffer, 4ul DTT 2ul, 5xSSS buffer 30ul DU/NTP mix 3ul, E.coli DNA ligase 1ul, E.Coli DNA polymerase 3ul, E.Coli Rnase H 1ul, Water 56ul, Incubate 16C for 2 hours, Add 2ul T4 DNA polymerase 5 minutes 16C. Qiagen column purification column Elute 50ul water or EB. Library was prepared following Illumina TruSeq RNA sample prep Low Throughput kit instructions with the exception to treat sample with 1ul Uracil N-glycosylase (UNG) 37C 15minutes (Applied Biosystems) before PCR amplification.

text: embryonic day 18.5

characteristic: developmental stage

text: Mus musculus

text: Mus musculus

text: liver

characteristic: organism part

text: wild type

characteristic: phenotype

text: Mus musculus

text: fresh specimen

characteristic: specimen with known storage state

characteristic: strain

characteristic: title


characteristic: External Id

text: Cambridge Institute

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: house mouse

characteristic: description

text: postnatal day 29

text: Mus musculus

characteristic: organism

text: Mus musculus

text: brain

text: wild type

text: Mus musculus

text: fresh specimen


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Cambridge Institute

text: public

text: ArrayExpress

text: house mouse

characteristic: common name

text: postnatal day 0.5

text: Mus musculus

text: Mus musculus

text: brain

text: wild type

text: Mus musculus

text: fresh specimen


text: Cambridge Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: house mouse

text: postnatal day 29

text: Mus musculus

text: Mus musculus

text: liver

text: wild type

text: Mus musculus

text: fresh specimen


text: Cambridge Institute

text: public

text: ArrayExpress

characteristic: broker name

text: house mouse

text: embryonic day 15.5

characteristic: developmental stage

text: Mus musculus

text: Mus musculus

text: brain

characteristic: organism part

text: wild type

characteristic: phenotype

text: Mus musculus

text: fresh specimen


characteristic: External Id

text: Cambridge Institute

text: public

text: ArrayExpress

text: house mouse

text: postnatal day 4

text: Mus musculus

text: Mus musculus

text: liver

text: wild type

text: Mus musculus

text: fresh specimen

characteristic: specimen with known storage state

characteristic: strain

characteristic: title


text: Cambridge Institute

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: house mouse

characteristic: description

text: postnatal day 0.5

text: Mus musculus

characteristic: organism

text: Mus musculus

text: liver

text: wild type

text: Mus musculus

text: fresh specimen


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Cambridge Institute

text: public

text: ArrayExpress

text: house mouse

characteristic: common name

text: postnatal day 22

text: Mus musculus

text: Mus musculus

text: brain

text: wild type

text: Mus musculus

text: fresh specimen


text: Cambridge Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: house mouse

text: postnatal day 22

text: Mus musculus

text: Mus musculus

text: liver

text: wild type

text: Mus musculus

text: fresh specimen


text: Cambridge Institute

text: public

text: ArrayExpress

characteristic: broker name

text: house mouse

text: embryonic day 18.5

characteristic: developmental stage

text: Mus musculus

text: Mus musculus

text: brain

characteristic: organism part

text: wild type

characteristic: phenotype

text: Mus musculus

text: fresh specimen


characteristic: External Id

text: Cambridge Institute

text: public

text: ArrayExpress

text: house mouse

text: postnatal day 4

text: Mus musculus

text: Mus musculus

text: brain

text: wild type

text: Mus musculus

text: fresh specimen

characteristic: specimen with known storage state

characteristic: strain

characteristic: title


text: Cambridge Institute

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: house mouse

characteristic: description

text: embryonic day 15.5

text: Mus musculus

characteristic: organism

text: Mus musculus

text: liver

text: wild type

text: Mus musculus

text: fresh specimen


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Cambridge Institute

text: public

text: ArrayExpress

text: house mouse

characteristic: common name

text: Protocols: C57BL/6J mice were bred and housed under UK Home Office licensing husbandry standards. After breeding, mice were observed for plugs. Morning of day when plug was first observed was counted as day E0. Samples were prepared by direct perfusion of the tissue with buffered salt solution, followed by 1% formaldehyde cross-linking. After 20 minutes, the cross-linking reaction was quenched with 1/20 volume of 2.5 M glycine to neutralize the formaldehyde. The animal tissues were crosslinked with formaldehyde and chromatin fragmented to an average of 300 bp by sonication. Chromatin from an mass equivalent of 1/4 mouse liver was used for each ChIP experiment. Solexa libraries were prepared following the inst

text: postnatal day 22

text: Mus musculus

text: Mus musculus

text: liver

text: wild type

text: Mus musculus

text: fresh specimen


text: Cambridge Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: house mouse

text: embryonic day 15.5

text: Mus musculus

text: Mus musculus

text: liver

text: wild type

text: Mus musculus

text: fresh specimen


text: Cambridge Institute

text: public

text: ArrayExpress

characteristic: broker name

text: house mouse

text: postnatal day 22

characteristic: developmental stage

text: Mus musculus

text: Mus musculus

text: brain

characteristic: organism part

text: wild type

characteristic: phenotype

text: Mus musculus

text: fresh specimen


characteristic: External Id

text: Cambridge Institute

text: public

text: ArrayExpress

text: house mouse

text: embryonic day 18.5

text: Mus musculus

text: Mus musculus

text: liver

text: wild type

text: Mus musculus

text: fresh specimen

characteristic: specimen with known storage state

characteristic: strain

characteristic: title


text: Cambridge Institute

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: house mouse

characteristic: description

text: embryonic day 12.5

text: Mus musculus

characteristic: organism

text: Mus musculus

text: head

text: wild type

text: Mus musculus

text: fresh specimen


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Cambridge Institute

text: public

text: ArrayExpress

text: house mouse

characteristic: common name

text: embryonic day 15.5

text: Mus musculus

text: Mus musculus

text: brain

text: wild type

text: Mus musculus

text: fresh specimen


text: Cambridge Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: house mouse

text: embryonic day 12.5

text: Mus musculus

text: Mus musculus

text: headless body

text: wild type

text: Mus musculus

text: fresh specimen


text: Cambridge Institute

text: public

text: ArrayExpress

characteristic: broker name

text: house mouse

text: embryonic day 18.5

characteristic: developmental stage

text: Mus musculus

text: Mus musculus

text: brain

characteristic: organism part

text: wild type

characteristic: phenotype

text: Mus musculus

text: fresh specimen


characteristic: External Id

text: Cambridge Institute

text: public

text: ArrayExpress

text: house mouse

text: postnatal day 0.5

text: Mus musculus

text: Mus musculus

text: liver

text: wild type

text: Mus musculus

text: fresh specimen

characteristic: specimen with known storage state

characteristic: strain

characteristic: title


text: Cambridge Institute

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: house mouse

characteristic: description

text: postnatal day 4

text: Mus musculus

characteristic: organism

text: Mus musculus

text: brain

text: wild type

text: Mus musculus

text: fresh specimen


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Cambridge Institute

text: public

text: ArrayExpress

text: house mouse

characteristic: common name

text: postnatal day 29

text: Mus musculus

text: Mus musculus

text: liver

text: wild type

text: Mus musculus

text: fresh specimen


text: Cambridge Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: house mouse

text: postnatal day 4

text: Mus musculus

text: Mus musculus

text: liver

text: wild type

text: Mus musculus

text: fresh specimen


text: Cambridge Institute

text: public

text: ArrayExpress

characteristic: broker name

text: house mouse

text: postnatal day 0.5

characteristic: developmental stage

text: Mus musculus

text: Mus musculus

text: brain

characteristic: organism part

text: wild type

characteristic: phenotype

text: Mus musculus

text: fresh specimen


characteristic: External Id

text: Cambridge Institute

text: public

text: ArrayExpress

text: house mouse

text: postnatal day 29

text: Mus musculus

text: Mus musculus

text: brain

text: wild type

text: Mus musculus

text: fresh specimen

characteristic: specimen with known storage state

characteristic: strain

characteristic: title


text: Cambridge Institute

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: house mouse

characteristic: description

text: embryonic day 9.5

text: Mus musculus

characteristic: organism

text: Mus musculus

text: whole body

text: wild type

text: Mus musculus

text: fresh specimen


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: LRI CRUK

text: public

tag: Namespace:LRI CRUK

text: ArrayExpress

text: CD34-positive leukocyte

characteristic: cell type

text: human

characteristic: common name

text: Protocols: GM12878 cells were obtained from the Coriell Cell Repositories and grown in suspension in RPMI 1640 medium, supplemented with 2 mM glutamine, 15% FBS and 1% penicillin/streptomycin under standard culture conditions. The white blood cell population was col Hi-C was performed following (Lieberman-Aiden et al., Science, 2009, DOI: 10.1126/science.1181369 ) with modifications detailed in (Mifsud et al.). For CHiC experiments promoter interactions were enriched using a biotynilated RNA bait library as described

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: fresh sample


text: LRI CRUK

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: B cell

text: human

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: fresh sample


text: Danio rerio

characteristic: ArrayExpress-Species

text: mixed

characteristic: ArrayExpress-StrainOrLine

characteristic: External Id

text: SC

text: public

text: sox10_t3_28hpf__clutch_1_mutant_1-sc-1862277

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically abnormal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TGCGATCT) is bases 13 to 20 of read 1 followed by CG and polyT.

characteristic: sample description

text: Danio rerio

text: mixed

characteristic: strain


text: Danio rerio

text: mixed

text: SC

text: public

characteristic: SRA accession

text: sox10_t3_28hpf__clutch_1_sibling_1-sc-1862278

characteristic: Submitter Id

text: zebrafish

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single morphologically normal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TTCCTGCT) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: sox10_t3_28hpf__clutch_1_mutant_2-sc-1862279

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically abnormal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TAGTGACT) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

characteristic: INSDC center name

text: public

text: sox10_t3_28hpf__clutch_1_sibling_2-sc-1862280

text: zebrafish

characteristic: common name

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically normal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TACAGGAT) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: sox10_t3_28hpf__clutch_1_mutant_3-sc-1862281

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically abnormal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TCCTCAAT) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

characteristic: INSDC status

text: sox10_t3_28hpf__clutch_1_sibling_3-sc-1862282

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically normal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TGTGGTTG) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_28hpf__clutch_1_mutant_4-sc-1862283

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically abnormal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TAGTCTTG) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_28hpf__clutch_1_sibling_4-sc-1862284

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically normal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TTCCATTG) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_28hpf__clutch_1_mutant_5-sc-1862285

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically abnormal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TCGAAGTG) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_28hpf__clutch_1_sibling_5-sc-1862286

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically normal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TAACGCTG) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_28hpf__clutch_1_mutant_6-sc-1862287

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically abnormal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TTGGTATG) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_28hpf__clutch_1_sibling_6-sc-1862288

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically normal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TGAACTGG) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_28hpf__clutch_1_mutant_7-sc-1862289

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically abnormal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TACTTCGG) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_28hpf__clutch_1_sibling_7-sc-1862290

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically normal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TCTCACGG) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_28hpf__clutch_1_mutant_8-sc-1862291

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically abnormal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TCAGGAGG) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_28hpf__clutch_1_sibling_8-sc-1862292

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically normal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TAAGTTCG) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_28hpf__clutch_1_mutant_9-sc-1862293

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically abnormal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TCCAGTCG) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_28hpf__clutch_1_sibling_9-sc-1862294

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically normal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TGTATGCG) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_28hpf__clutch_1_mutant_10-sc-1862295

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically abnormal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TCATTGAG) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_28hpf__clutch_1_sibling_10-sc-1862296

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically normal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TGGCTCAG) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_28hpf__clutch_1_mutant_11-sc-1862297

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically abnormal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TATGCCAG) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_28hpf__clutch_1_sibling_11-sc-1862298

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically normal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TCAGATTC) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_28hpf__clutch_1_mutant_12-sc-1862299

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically abnormal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TACTAGTC) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_28hpf__clutch_1_sibling_12-sc-1862300

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically normal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TTCAGCTC) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_5dpf__clutch_1_mutant_1-sc-1862301

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically abnormal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TGTCTATC) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_5dpf__clutch_1_sibling_1-sc-1862302

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically normal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TATGTGGC) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_5dpf__clutch_1_mutant_2-sc-1862303

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically abnormal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TTACTCGC) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_5dpf__clutch_1_sibling_2-sc-1862304

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically normal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TCGTTAGC) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_5dpf__clutch_1_mutant_3-sc-1862305

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically abnormal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TACCGAGC) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_5dpf__clutch_1_sibling_3-sc-1862306

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically normal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TGTTCTCC) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_5dpf__clutch_1_mutant_4-sc-1862307

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically abnormal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TTCGCACC) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_5dpf__clutch_1_sibling_4-sc-1862308

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically normal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TTGCGTAC) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_5dpf__clutch_1_mutant_5-sc-1862309

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically abnormal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TCTACGAC) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_5dpf__clutch_1_sibling_5-sc-1862310

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically normal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TGACAGAC) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_5dpf__clutch_1_mutant_6-sc-1862311

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically abnormal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TAGAACAC) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_5dpf__clutch_1_sibling_6-sc-1862312

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically normal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TCATCCTA) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_5dpf__clutch_1_mutant_7-sc-1862313

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically abnormal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TGCTGATA) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_5dpf__clutch_1_sibling_7-sc-1862314

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically normal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TAGACGGA) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_5dpf__clutch_1_mutant_8-sc-1862315

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically abnormal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TGTGAAGA) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_5dpf__clutch_1_sibling_8-sc-1862316

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically normal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TCTCTTCA) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_5dpf__clutch_1_mutant_9-sc-1862317

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically abnormal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TTGTTCCA) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_5dpf__clutch_1_sibling_9-sc-1862318

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically normal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TGAAGCCA) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_5dpf__clutch_1_mutant_10-sc-1862319

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically abnormal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TACCACCA) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_5dpf__clutch_1_sibling_10-sc-1862320

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically normal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (TGCGTGAA) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_5dpf__clutch_1_mutant_11-sc-1862321

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically abnormal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (GGTGAGTT) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_5dpf__clutch_1_sibling_11-sc-1862322

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically normal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (GATCTCTT) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_5dpf__clutch_1_mutant_12-sc-1862323

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically abnormal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (GTGTCCTT) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Danio rerio

text: mixed

text: SC

text: public

text: sox10_t3_5dpf__clutch_1_sibling_12-sc-1862324

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single morphologically normal embryo from sox10, allele t3 clutch 1. A 8 base indexing sequence (GACGGATT) is bases 13 to 20 of read 1 followed by CG and polyT.

text: Danio rerio

text: mixed


text: Mouse

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus


text: European bioinformatic Institute

text: public

text: ArrayExpress

characteristic: broker name

text: embryonic stem cell

characteristic: cell type

text: house mouse

text: Protocols: ESCs were cultured using standard procedures in medium containing 1,000U/ml leukemia inhibitory factor (Millipore) with irradiated MEF feeders (Global Stem) on gelatin-coated plates. ESCs were removed from feeder cells by soaking twice on gelatin-coated plates for 1 hour each prior to sample collection or cell differentiation. Differentiation was performed by culturing ESCs in the absence of MEF feeders in 50:50 DMEM/F12:Neurobasal medium (Gibco) supplemented with 1x N2 (Gibco), 1x B27 (Gibco), 40mg/L insulin (Sigma), 25ug/ml BSA Fraction V (Gibco) at 0.5x106-2.0x106 cells/10cm plate for 6 days. Cells were then resuspended in N2 expansion medium (DMEM/F12, 50ug/ml BSA fraction V, 10ng/ml EGF (Preprotech), 10ng/ml FGF (Preprotech), 1ug/ml laminin (Invitrogen), 1x N2) and plated onto uncoated T75 flasks to allow for neurosphere outgrowth. Following 4 days, neurospheres were collected by mild centrifugation and plated onto gelatin-coated plates in N2 expansion medium. Following 2-3 passages, cells represented a homogeneous population of NPCs, which could be seeded to expand single-cell derived clones. RNA from was isolated using Trizol reagent (Ambion) according to the manufacturer's instructions. PolyA+ RNA was isolated (Oligotex kit, Qiagen) from 10ug total RNA. Stranded libraries were prepared using a protocol adapted from (Parkhomchuk et al., 2009) for paired-end sequencing on the Illumina GA IIx platform.

characteristic: description

text: Mus musculus

text: Mus musculus

text: clonal expansion

characteristic: passage

text: Mus musculus

text: fresh specimen

characteristic: specimen with known storage state

characteristic: title


characteristic: External Id

text: European bioinformatic Institute

text: public

characteristic: SRA accession

text: ArrayExpress

text: neuro progenitor cell

text: house mouse

text: Mus musculus

text: Mus musculus

text: clonal expansion

text: Mus musculus

text: fresh specimen

characteristic: strain


characteristic: ENA-CHECKLIST

text: European bioinformatic Institute

text: public

characteristic: Submitter Id

text: ArrayExpress

text: embryonic stem cell

text: house mouse

text: Mus musculus

characteristic: organism

text: Mus musculus

text: polyclonal expansion

text: Mus musculus

text: fresh specimen


text: ESC

characteristic: ArrayExpress-CellType

text: embryonic stem cell line

characteristic: ArrayExpress-DevelopmentalStage

characteristic: ArrayExpress-Genotype

characteristic: ArrayExpress-GrowthCondition

text: male

characteristic: ArrayExpress-Sex

text: Mus Musculus

characteristic: ArrayExpress-Species

characteristic: ArrayExpress-StrainOrLine

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

characteristic: INSDC center name

text: public

text: house mouse

text: Mus musculus

text: mRNAseq Nextera library made from G4 ES cell line from a male blastocyst from a C57BL/6Ncr male x 129S6/SvEvTac female

characteristic: sample description

text: Mus musculus


text: ESC

text: embryonic stem cell line

text: G4 ES cell line from a male blastocyst from a C57BL/6Ncr male x 129S6/SvEvTac female

text: male

text: Mus Musculus

characteristic: External Id

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: house mouse

characteristic: common name

text: Mus musculus

text: Mus musculus


characteristic: ENA-CHECKLIST

text: University of Edinburgh

text: public

characteristic: SRA accession

tag: Namespace:University of Edinburgh

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: sheep

text: Protocols: New Zealand Cheviot sheep of PRNP genotypes VRQ/VRQ, from the DEFRA breeding flock were inoculated subcutaneously with 2 ml of 10% w/v brain homogenate into sites on either side of the neck roughly 10cm anterior to the prescapular lymph node (PSLN). In all experiments frozen lymph node was converted to a frozen tissue powder. Briefly a 100 mg of tissue per sample was placed into a Teflon flask along with steel ball and placed in liquid Nitrogen for 1 min. Homogenised for 60 seconds at 2000 rpm in a Mikro-Dismembrator U (B.Braun Biotech International GmbH). Total RNA was extracted from the frozen tissue powder using the RiboPure Kit (Ambion) including a DNase I digestion. To the frozen tissue powder 1 ml of Tri Reagent was added and then homogenise for a further 15 seconds at 1500rpm. A 200 ul aliquot of chloroform was added to lysate and mixed vigorously by vortexing. The protocol was then followed as per the manufactures instructions. The RNA was eluted in a final volume of 50 ul. Each RNA sample was DNase I (Ambion) treated as per the manufacturers instructions. The quality and quantity of the isolated total RNA was assessed using a RNA LabChip on the Agilent 2100 bioanalyser and a NanoDrop ND-1000 Spectrophotometer (Nanodrop Technologies Inc.). (

characteristic: description

text: lamb

characteristic: developmental stage

text: SSBP/1 infected

characteristic: disease

text: Ovis aries

characteristic: organism

text: Ovis aries

text: prescapular lymph node

characteristic: organism part

text: Ovis aries

text: male

characteristic: sex

text: frozen specimen

characteristic: specimen with known storage state

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Edinburgh

characteristic: INSDC center name

text: public

text: ArrayExpress

text: sheep

text: lamb

text: mock infected

text: Ovis aries

text: Ovis aries

text: prescapular lymph node

text: Ovis aries

text: male

text: frozen specimen


E-MTAB-2365:mESCs 2i

text: GIS

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-2365:mESCs 2i

text: ArrayExpress

characteristic: cell line

text: embryonic stem cell

characteristic: cell type

text: house mouse

characteristic: common name

text: Protocols: Feeder-free E14 mouse embryonic stem cells were cultured on 0.1% gelatin under LIF/Serum or 2i culture conditions for three passages Feeder-free E14 mouse embryonic stem cells were cultured on 0.1% gelatin under LIF (1000U Leukemia inhibitory factor)/Serum (ES grade FBS) or 2i (1uM PD0325901 and 3uM CHIR99021, termed 2i) culture for three passages Crosslinking of protein and DNA was done at room temperature for 10 minutes using ESC media that contains 1% formaldehyde. The crosslinking reaction was quenched with 0.2M final concentration of glycine for 5 minutes. Cells were washed extensively with TBSE (20 mM Tris-HCl, 150 mM NaCl, 1 mM EDTA), scraped and pelleted. The cells were lysed with 0.1% SDS buffer and collected nuclei were lysed with 1% SDS buffer. Pelleted chromatin was resuspended in the 0.1% SDS buffer (50 mM HEPES-KOH, 150 mM NaCl, 2 mM EDTA, 1% Triton X-100, 0.1% deoxycholate, 0.1% SDS) and the DNA was sheared with the probe sonicator (Branson digital sonifier S-450D) for 18 cycles of 30 seconds with 1 min intervals at amplitude 40. The chromatin sample was centrifuged at 20,000 rpm for 45 mins before the supernatant was harvested as chromatin extracts for ChIP. Chromatin extracts were pre-cleared with Protein G Dynal Magnetic Beads (Invitrogen) (2 h, 4C) and immunoprecipitated overnight at 4C using Protein G Dynal Magnetic Beads pre-coupled with antibodies against Klf2 (antibody serum raised in rabbit against amino acids 90-255 of mouse Klf2) (Jiang et al., 2008, Nature Cell Biology). Beads were washed 3x with 0.1% SDS buffer, once with 0.1% SDS/ 0.35M NaCl buffer, once in 10 mM Tris-HCl, 0.25M LiCl, 1 mM EDTA, 0.5% deoxycholate, 0.5% NP-40, and once in TE buffer (10 mM Tris-HCl, 1 mM EDTA). Immunoprecipitated material was eluted from the beads with 50 mM Tris-HCl, 10 mM EDTA, 1% SDS at 69C for 30 mins in a orbital shaker at 1000 rpm. Crosslinks were reversed by incubation with pronase for 2 h at 42C then 6 h at 67C. DNA was extracted by phenol/chloroform/isoamyl-alcohol followed by chloroform, then precipitated with ethanol and resuspended in TE buffer. ChIP-Seq library was prepared using the NEBNext ChIP-Seq Library kit (NEB Biolabs) according to the manufacturer’s instructions. Briefly, the DNA was end-repaired with exonucleases and an adaptor was ligated to the end. Size selection was performed using AMPure XP Beads prior to PCR amplification for 18 cycles. The amplified DNA was purified using AMPure XP Beads, multiplexed and sequenced with the HiSeq 2000 system (Illumina).

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: male

text: mESCs 2i


E-MTAB-2365:mESCs Serum/Lif

characteristic: ENA-CHECKLIST

text: GIS

text: public

characteristic: SRA accession

text: E-MTAB-2365:mESCs Serum/Lif

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: embryonic stem cell

text: house mouse

characteristic: description

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: male

text: mESCs Serum/Lif


text: MMRI

text: public

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens


IA Sample 4088

text: ICL-CFB

text: public

text: Muslim

characteristic: Religion

text: IA Sample 4088

unit: year

characteristic: age

text: human

text: Pakistan

characteristic: country of birth

text: This individual is a 51 year old male of South-Asian origin (Country of Birth: Pakistan). They are Muslim.

text: Homo sapiens

text: Homo sapiens

text: male

characteristic: sex

text: Sample 4088

characteristic: title


IA Sample 4096

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ICL-CFB

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Muslim

text: IA Sample 4096

text: human

text: India

text: This individual is a 43 year old male of South-Asian origin (Country of Birth: India). They are Muslim.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 4096


IA Sample 4189

text: ICL-CFB

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Hindu

text: IA Sample 4189

text: human

characteristic: common name

text: Sri Lanka

text: This individual is a 50 year old male of South-Asian origin (Country of Birth: Sri Lanka). They are Hindu.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 4189


IA Sample 4237

characteristic: ENA-CHECKLIST

text: ICL-CFB

text: public

text: Muslim

characteristic: SRA accession

text: IA Sample 4237

characteristic: Submitter Id

text: human

text: Pakistan

text: This individual is a 47 year old male of South-Asian origin (Country of Birth: Pakistan). They are Muslim.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 4237


IA Sample 4241

text: ICL-CFB

text: public

text: Muslim

text: IA Sample 4241

text: human

text: Pakistan

characteristic: description

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: male

text: Sample 4241


IA Sample 4273

text: ICL-CFB

text: public

text: Hindu

characteristic: Religion

text: IA Sample 4273

characteristic: age

text: human

text: India

text: This individual is a 45 year old male of South-Asian origin (Country of Birth: India). They are Hindu.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 4273


IA Sample 4330

text: ICL-CFB

text: public

text: Gujarati

characteristic: Language

text: Hindu

text: IA Sample 4330

text: human

text: India

characteristic: country of birth

text: This individual is a 43 year old male of South-Asian origin (Country of Birth: India). They are Hindu, and their first language is Gujarati.

text: Homo sapiens

text: Homo sapiens

text: male

characteristic: sex

text: Sample 4330


IA Sample 4485

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: ICL-CFB

text: public

text: Muslim

text: IA Sample 4485

text: human

text: Pakistan

text: This individual is a 45 year old male of South-Asian origin (Country of Birth: Pakistan). They are Muslim.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 4485

characteristic: title


IA Sample 4505

characteristic: External Id

text: ICL-CFB

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Sikh

text: IA Sample 4505

text: human

text: India

text: This individual is a 60 year old male of South-Asian origin (Country of Birth: India). They are Sikh.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 4505


IA Sample 4520

text: ICL-CFB

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Sikh

text: IA Sample 4520

text: human

characteristic: common name

text: India

text: This individual is a 46 year old male of South-Asian origin (Country of Birth: India). They are Sikh.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 4520


IA Sample 4528

characteristic: ENA-CHECKLIST

text: ICL-CFB

text: public

text: Muslim

characteristic: SRA accession

text: IA Sample 4528

characteristic: Submitter Id

text: human

text: Kenya

text: This individual is a 45 year old male of South-Asian origin (Country of Birth: Kenya). They are Muslim.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 4528


IA Sample 4553

text: ICL-CFB

text: public

text: Sikh

characteristic: Religion

text: IA Sample 4553

text: human

text: India

text: This individual is a 47 year old male of South-Asian origin (Country of Birth: India). They are Sikh.

characteristic: description

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: male

text: Sample 4553


IA Sample 4562

text: ICL-CFB

text: public

text: Muslim

text: IA Sample 4562

characteristic: age

text: human

text: Pakistan

characteristic: country of birth

text: This individual is a 41 year old male of South-Asian origin (Country of Birth: Pakistan). They are Muslim.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 4562


IA Sample 4574

characteristic: ENA-FIRST-PUBLIC

text: ICL-CFB

text: public

text: Sikh

text: IA Sample 4574

text: human

text: India

text: This individual is a 42 year old male of South-Asian origin (Country of Birth: India). They are Sikh.

text: Homo sapiens

text: Homo sapiens

text: male

characteristic: sex

text: Sample 4574


IA Sample 4592

characteristic: ENA-LAST-UPDATE

text: ICL-CFB

text: public

text: Muslim

text: IA Sample 4592

text: human

text: United Kingdom

text: This individual is a 31 year old male of South-Asian origin (Country of Birth: United Kingdom). They are Muslim.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 4592

characteristic: title


IA Sample 4666

characteristic: External Id

text: ICL-CFB

characteristic: INSDC center name

text: public

text: Muslim

text: IA Sample 4666

text: human

text: Pakistan

text: This individual is a 39 year old male of South-Asian origin (Country of Birth: Pakistan). They are Muslim.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 4666


IA Sample 4721

text: ICL-CFB

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Sikh

text: IA Sample 4721

text: human

text: India

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 4721


IA Sample 4811

text: ICL-CFB

text: public

characteristic: INSDC status

text: Hindu

text: IA Sample 4811

text: human

characteristic: common name

text: India

text: This individual is a 32 year old male of South-Asian origin (Country of Birth: India). They are Hindu.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 4811


IA Sample 4823

characteristic: ENA-CHECKLIST

text: ICL-CFB

text: public

text: Muslim

characteristic: SRA accession

text: IA Sample 4823

text: human

text: Pakistan

text: This individual is a 46 year old male of South-Asian origin (Country of Birth: Pakistan). They are Muslim.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 4823


IA Sample 4832

text: ICL-CFB

text: public

text: Muslim

characteristic: Religion

text: IA Sample 4832

characteristic: Submitter Id

text: human

text: East Africa

text: This individual is a 48 year old male of South-Asian origin (Country of Birth: East Africa). They are Muslim.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 4832


IA Sample 4845

text: ICL-CFB

text: public

text: Sikh

text: IA Sample 4845

text: human

text: India

text: This individual is a 49 year old male of South-Asian origin (Country of Birth: India). They are Sikh.

characteristic: description

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: male

text: Sample 4845


IA Sample 4855

text: ICL-CFB

text: public

text: Muslim

text: IA Sample 4855

characteristic: age

text: human

text: Pakistan

characteristic: country of birth

text: This individual is a 50 year old male of South-Asian origin (Country of Birth: Pakistan). They are Muslim.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 4855


IA Sample 4944

characteristic: ENA-FIRST-PUBLIC

text: ICL-CFB

text: public

text: Sikh

text: IA Sample 4944

text: human

text: India

text: This individual is a 44 year old male of South-Asian origin (Country of Birth: India). They are Sikh.

text: Homo sapiens

text: Homo sapiens

text: male

characteristic: sex

text: Sample 4944


IA Sample 4953

characteristic: ENA-LAST-UPDATE

text: ICL-CFB

text: public

text: Sikh

text: IA Sample 4953

text: human

text: India

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 4953

characteristic: title


IA Sample 4988

characteristic: External Id

text: ICL-CFB

characteristic: INSDC center name

text: public

text: Muslim

text: IA Sample 4988

text: human

text: Pakistan

text: This individual is a 48 year old male of South-Asian origin (Country of Birth: Pakistan). They are Muslim.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 4988


IA Sample 5010

text: ICL-CFB

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Hindu

text: IA Sample 5010

text: human

text: East Africa

text: This individual is a 47 year old male of South-Asian origin (Country of Birth: East Africa). They are Hindu.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 5010


IA Sample 5011

text: ICL-CFB

text: public

characteristic: INSDC status

text: Christian

text: IA Sample 5011

text: human

characteristic: common name

text: India

text: This individual is a 49 year old male of South-Asian origin (Country of Birth: India). They are Christian.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 5011


IA Sample 5347

characteristic: ENA-CHECKLIST

text: ICL-CFB

text: public

text: Sikh

characteristic: SRA accession

text: IA Sample 5347

text: human

text: East Africa

text: This individual is a 46 year old male of South-Asian origin (Country of Birth: East Africa). They are Sikh.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 5347


IA Sample 5371

text: ICL-CFB

text: public

text: Sikh

characteristic: Religion

text: IA Sample 5371

characteristic: Submitter Id

text: human

text: India

text: This individual is a 50 year old male of South-Asian origin (Country of Birth: India). They are Sikh.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 5371


IA Sample 5388

text: ICL-CFB

text: public

text: Sikh

text: IA Sample 5388

text: human

text: India

text: This individual is a 48 year old male of South-Asian origin (Country of Birth: India). They are Sikh.

characteristic: description

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: male

text: Sample 5388


IA Sample 5408

text: ICL-CFB

text: public

text: Sikh

text: IA Sample 5408

characteristic: age

text: human

text: India

characteristic: country of birth

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 5408


IA Sample 5470

characteristic: ENA-FIRST-PUBLIC

text: ICL-CFB

text: public

text: Muslim

text: IA Sample 5470

text: human

text: East Africa

text: This individual is a 45 year old male of South-Asian origin (Country of Birth: East Africa). They are Muslim.

text: Homo sapiens

text: Homo sapiens

text: male

characteristic: sex

text: Sample 5470


IA Sample 5491

characteristic: ENA-LAST-UPDATE

text: ICL-CFB

text: public

text: Hindu

text: IA Sample 5491

text: human

text: India

text: This individual is a 46 year old male of South-Asian origin (Country of Birth: India). They are Hindu.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 5491

characteristic: title


IA Sample 5506

characteristic: External Id

text: ICL-CFB

characteristic: INSDC center name

text: public

text: Muslim

text: IA Sample 5506

text: human

text: Pakistan

text: This individual is a 49 year old male of South-Asian origin (Country of Birth: Pakistan). They are Muslim.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 5506


IA Sample 5533

text: ICL-CFB

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Hindu

text: IA Sample 5533

text: human

text: India

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 5533


IA Sample 5565

text: ICL-CFB

text: public

characteristic: INSDC status

text: Sikh

text: IA Sample 5565

text: human

characteristic: common name

text: India

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 5565


IA Sample 5625

characteristic: ENA-CHECKLIST

text: ICL-CFB

text: public

text: Sikh

characteristic: SRA accession

text: IA Sample 5625

text: human

text: India

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 5625


IA Sample 5639

text: ICL-CFB

text: public

text: Sikh

characteristic: Religion

text: IA Sample 5639

characteristic: Submitter Id

text: human

text: India

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 5639


IA Sample 5658

text: ICL-CFB

text: public

text: Sikh

text: IA Sample 5658

text: human

text: India

text: This individual is a 45 year old male of South-Asian origin (Country of Birth: India). They are Sikh.

characteristic: description

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: male

text: Sample 5658


IA Sample 5728

text: ICL-CFB

text: public

text: Sikh

text: IA Sample 5728

characteristic: age

text: human

text: India

characteristic: country of birth

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 5728


IA Sample 5920

characteristic: ENA-FIRST-PUBLIC

text: ICL-CFB

text: public

text: Sikh

text: IA Sample 5920

text: human

text: India

text: Homo sapiens

text: Homo sapiens

text: male

characteristic: sex

text: Sample 5920


IA Sample 6089

characteristic: ENA-LAST-UPDATE

text: ICL-CFB

text: public

text: Sikh

text: IA Sample 6089

text: human

text: India

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 6089

characteristic: title


IA Sample 6109

characteristic: External Id

text: ICL-CFB

characteristic: INSDC center name

text: public

text: Hindu

text: IA Sample 6109

text: human

text: Other

text: This individual is a 47 year old male of South-Asian origin (Country of Birth: Other). They are Hindu.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 6109


IA Sample 6286

text: ICL-CFB

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Christian

text: IA Sample 6286

text: human

text: Sri Lanka

text: This individual is a 49 year old male of South-Asian origin (Country of Birth: Sri Lanka). They are Christian.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 6286


IA Sample 6401

text: ICL-CFB

text: public

characteristic: INSDC status

text: Sikh

text: IA Sample 6401

text: human

characteristic: common name

text: India

text: This individual is a 51 year old male of South-Asian origin (Country of Birth: India). They are Sikh.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 6401


IA Sample 6469

characteristic: ENA-CHECKLIST

text: ICL-CFB

text: public

text: Muslim

characteristic: SRA accession

text: IA Sample 6469

text: human

text: India

text: This individual is a 47 year old male of South-Asian origin (Country of Birth: India). They are Muslim.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 6469


IA Sample 6483

text: ICL-CFB

text: public

text: Other

characteristic: Religion

text: IA Sample 6483

characteristic: Submitter Id

text: human

text: Sri Lanka

text: This individual is a 47 year old male of South-Asian origin (Country of Birth: Sri Lanka). They are Other.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 6483


IA Sample 6487

text: ICL-CFB

text: public

text: Sikh

text: IA Sample 6487

text: human

text: India

characteristic: description

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: male

text: Sample 6487


IA Sample 6619

text: ICL-CFB

text: public

text: Muslim

text: IA Sample 6619

characteristic: age

text: human

text: Pakistan

characteristic: country of birth

text: This individual is a 43 year old male of South-Asian origin (Country of Birth: Pakistan). They are Muslim.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 6619


IA Sample 6777

characteristic: ENA-FIRST-PUBLIC

text: ICL-CFB

text: public

text: Sikh

text: IA Sample 6777

text: human

text: Singapore

text: This individual is a 45 year old male of South-Asian origin (Country of Birth: Singapore). They are Sikh.

text: Homo sapiens

text: Homo sapiens

text: male

characteristic: sex

text: Sample 6777


IA Sample 6814

characteristic: ENA-LAST-UPDATE

text: ICL-CFB

text: public

text: Buddhist

text: IA Sample 6814

text: human

text: Sri Lanka

text: This individual is a 47 year old male of South-Asian origin (Country of Birth: Sri Lanka). They are Buddhist.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 6814

characteristic: title


IA Sample 6904

characteristic: External Id

text: ICL-CFB

characteristic: INSDC center name

text: public

text: Sikh

text: IA Sample 6904

text: human

text: Fiji

text: This individual is a 45 year old male of South-Asian origin (Country of Birth: Fiji). They are Sikh.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 6904


IA Sample 6910

text: ICL-CFB

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Muslim

text: IA Sample 6910

text: human

text: Pakistan

text: This individual is a 45 year old male of South-Asian origin (Country of Birth: Pakistan). They are Muslim.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 6910


IA Sample 6918

text: ICL-CFB

text: public

characteristic: INSDC status

text: Christian

text: IA Sample 6918

text: human

characteristic: common name

text: India

text: This individual is a 44 year old male of South-Asian origin (Country of Birth: India). They are Christian.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 6918


IA Sample 6976

characteristic: ENA-CHECKLIST

text: ICL-CFB

text: public

text: Hindu

characteristic: SRA accession

text: IA Sample 6976

text: human

text: India

text: This individual is a 45 year old male of South-Asian origin (Country of Birth: India). They are Hindu.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 6976


IA Sample 6986

text: ICL-CFB

text: public

text: Muslim

characteristic: Religion

text: IA Sample 6986

characteristic: Submitter Id

text: human

text: Pakistan

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 6986


IA Sample 7041

text: ICL-CFB

text: public

text: Sinhalese

characteristic: Language

text: Buddhist

text: IA Sample 7041

text: human

text: Sri Lanka

text: This individual is a 42 year old male of South-Asian origin (Country of Birth: Sri Lanka). They are Buddhist, and their first language is Sinhalese.

characteristic: description

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: male

text: Sample 7041


IA Sample 7105

characteristic: ENA-FIRST-PUBLIC

text: ICL-CFB

text: public

text: Bengali

text: Muslim

text: IA Sample 7105

characteristic: age

text: human

text: Bangladesh

characteristic: country of birth

text: This individual is a 39 year old male of South-Asian origin (Country of Birth: Bangladesh). They are Muslim, and their first language is Bengali.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 7105


IA Sample 7126

characteristic: ENA-LAST-UPDATE

text: ICL-CFB

text: public

text: Punjabi

text: Muslim

text: IA Sample 7126

text: human

text: Pakistan

text: This individual is a 49 year old male of South-Asian origin (Country of Birth: Pakistan). They are Muslim, and their first language is Punjabi.

text: Homo sapiens

text: Homo sapiens

text: male

characteristic: sex

text: Sample 7126

characteristic: title


IA Sample 7140

characteristic: External Id

text: ICL-CFB

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Bengali

text: Muslim

text: IA Sample 7140

text: human

text: Bangladesh

text: This individual is a 44 year old male of South-Asian origin (Country of Birth: Bangladesh). They are Muslim, and their first language is Bengali.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 7140


IA Sample 7155

text: ICL-CFB

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Urdu

text: Muslim

text: IA Sample 7155

text: human

characteristic: common name

text: Pakistan

text: This individual is a 44 year old male of South-Asian origin (Country of Birth: Pakistan). They are Muslim, and their first language is Urdu.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 7155


IA Sample 7166

characteristic: ENA-CHECKLIST

text: ICL-CFB

text: public

text: Punjabi

text: Sikh

characteristic: Religion

characteristic: SRA accession

text: IA Sample 7166

text: human

text: India

text: This individual is a 51 year old male of South-Asian origin (Country of Birth: India). They are Sikh, and their first language is Punjabi.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 7166


IA Sample 7197

text: ICL-CFB

text: public

text: Malayalam

characteristic: Language

text: Hindu

text: IA Sample 7197

characteristic: Submitter Id

text: human

text: India

text: This individual is a 62 year old male of South-Asian origin (Country of Birth: India). They are Hindu, and their first language is Malayalam.

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 7197


IA Sample 7218

characteristic: ENA-FIRST-PUBLIC

text: ICL-CFB

text: public

text: Punjabi

text: Muslim

text: IA Sample 7218

characteristic: age

text: human

text: Pakistan

text: This individual is a 43 year old male of South-Asian origin (Country of Birth: Pakistan). They are Muslim, and their first language is Punjabi.

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: male

text: Sample 7218


IA Sample 7237

characteristic: ENA-LAST-UPDATE

text: ICL-CFB

text: public

text: Urdu

text: Muslim

text: IA Sample 7237

text: human

text: Pakistan

characteristic: country of birth

text: This individual is a 42 year old male of South-Asian origin (Country of Birth: Pakistan). They are Muslim, and their first language is Urdu.

text: Homo sapiens

text: Homo sapiens

text: male

characteristic: sex

text: Sample 7237


IA Sample 7252

characteristic: External Id

text: ICL-CFB

characteristic: INSDC center name

text: public

text: Punjabi

text: Muslim

text: IA Sample 7252

text: human

text: Pakistan

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 7252

characteristic: title


IA Sample 7254

text: ICL-CFB

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Punjabi

text: Muslim

text: IA Sample 7254

text: human

text: Pakistan

text: This individual is a 39 year old male of South-Asian origin (Country of Birth: Pakistan). They are Muslim, and their first language is Punjabi.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 7254


IA Sample 7268

characteristic: ENA-CHECKLIST

text: ICL-CFB

text: public

text: Gujarati

text: Hindu

characteristic: Religion

text: IA Sample 7268

text: human

characteristic: common name

text: East Africa

text: This individual is a 48 year old male of South-Asian origin (Country of Birth: East Africa). They are Hindu, and their first language is Gujarati.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 7268


IA Sample 7343

text: ICL-CFB

text: public

text: Gujarati

characteristic: Language

text: Hindu

characteristic: SRA accession

text: IA Sample 7343

characteristic: Submitter Id

text: human

text: East Africa

text: This individual is a 46 year old male of South-Asian origin (Country of Birth: East Africa). They are Hindu, and their first language is Gujarati.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 7343


IA Sample 7352

characteristic: ENA-FIRST-PUBLIC

text: ICL-CFB

text: public

text: Urdu

text: Muslim

text: IA Sample 7352

characteristic: age

text: human

text: Pakistan

text: This individual is a 48 year old male of South-Asian origin (Country of Birth: Pakistan). They are Muslim, and their first language is Urdu.

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 7352


IA Sample 7741

characteristic: ENA-LAST-UPDATE

text: ICL-CFB

text: public

text: Urdu

text: Muslim

text: IA Sample 7741

text: human

text: Pakistan

characteristic: country of birth

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: male

text: Sample 7741


IA Sample 7854

characteristic: External Id

text: ICL-CFB

characteristic: INSDC center name

text: public

text: Punjabi

text: Christian

text: IA Sample 7854

text: human

text: India

text: This individual is a 68 year old male of South-Asian origin (Country of Birth: India). They are Christian, and their first language is Punjabi.

text: Homo sapiens

text: Homo sapiens

text: male

characteristic: sex

text: Sample 7854


IA Sample 7889

text: ICL-CFB

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Punjabi

text: Sikh

text: IA Sample 7889

text: human

text: India

text: This individual is a 45 year old male of South-Asian origin (Country of Birth: India). They are Sikh, and their first language is Punjabi.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 7889

characteristic: title


IA Sample 7891

characteristic: ENA-CHECKLIST

text: ICL-CFB

text: public

characteristic: INSDC status

text: Urdu

text: Muslim

characteristic: Religion

text: IA Sample 7891

text: human

text: India

text: This individual is a 66 year old male of South-Asian origin (Country of Birth: India). They are Muslim, and their first language is Urdu.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 7891


IA Sample 8022

text: ICL-CFB

text: public

text: Punjabi

characteristic: Language

text: Sikh

characteristic: SRA accession

text: IA Sample 8022

text: human

characteristic: common name

text: India

text: This individual is a 50 year old male of South-Asian origin (Country of Birth: India). They are Sikh, and their first language is Punjabi.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 8022


IA Sample 8453

characteristic: ENA-FIRST-PUBLIC

text: ICL-CFB

text: public

text: Malayalam

text: Hindu

text: IA Sample 8453

characteristic: Submitter Id

characteristic: age

text: human

text: Singapore

text: This individual is a 47 year old male of South-Asian origin (Country of Birth: Singapore). They are Hindu, and their first language is Malayalam.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 8453


IA Sample 8529

characteristic: ENA-LAST-UPDATE

text: ICL-CFB

text: public

text: Punjabi

text: Sikh

text: IA Sample 8529

text: human

text: India

characteristic: country of birth

text: This individual is a 47 year old male of South-Asian origin (Country of Birth: India). They are Sikh, and their first language is Punjabi.

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 8529


IA Sample 8650

characteristic: External Id

text: ICL-CFB

characteristic: INSDC center name

text: public

text: Malayalam

text: Christian

text: IA Sample 8650

text: human

text: India

text: This individual is a 74 year old male of South-Asian origin (Country of Birth: India). They are Christian, and their first language is Malayalam.

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: male

text: Sample 8650


IA Sample 8677

text: ICL-CFB

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Punjabi

text: Hindu

text: IA Sample 8677

text: human

text: India

text: This individual is a 67 year old male of South-Asian origin (Country of Birth: India). They are Hindu, and their first language is Punjabi.

text: Homo sapiens

text: Homo sapiens

text: male

characteristic: sex

text: Sample 8677


IA Sample 8681

characteristic: ENA-CHECKLIST

text: ICL-CFB

text: public

characteristic: INSDC status

text: Tamil

text: Hindu

text: IA Sample 8681

text: human

text: Sri Lanka

text: This individual is a 48 year old male of South-Asian origin (Country of Birth: Sri Lanka). They are Hindu, and their first language is Tamil.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 8681

characteristic: title


IA Sample 8740

text: ICL-CFB

text: public

text: Konkani

characteristic: Language

text: Christian

characteristic: Religion

characteristic: SRA accession

text: IA Sample 8740

text: human

text: India

text: This individual is a 55 year old male of South-Asian origin (Country of Birth: India). They are Christian, and their first language is Konkani.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 8740


IA Sample 8854

characteristic: ENA-FIRST-PUBLIC

text: ICL-CFB

text: public

text: Gujarati

text: Hindu

text: IA Sample 8854

characteristic: Submitter Id

text: human

characteristic: common name

text: India

text: This individual is a 52 year old male of South-Asian origin (Country of Birth: India). They are Hindu, and their first language is Gujarati.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 8854


IA Sample 8887

characteristic: ENA-LAST-UPDATE

text: ICL-CFB

text: public

text: Punjabi

text: Sikh

text: IA Sample 8887

characteristic: age

text: human

text: India

characteristic: country of birth

text: This individual is a 37 year old male of South-Asian origin (Country of Birth: India). They are Sikh, and their first language is Punjabi.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 8887


IA Sample 8925

characteristic: External Id

text: ICL-CFB

characteristic: INSDC center name

text: public

text: Tamil

text: Hindu

text: IA Sample 8925

text: human

text: Sri Lanka

text: This individual is a 38 year old male of South-Asian origin (Country of Birth: Sri Lanka). They are Hindu, and their first language is Tamil.

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 8925


IA Sample 8947

text: ICL-CFB

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Malayalam

text: Christian

text: IA Sample 8947

text: human

text: India

text: This individual is a 73 year old male of South-Asian origin (Country of Birth: India). They are Christian, and their first language is Malayalam.

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: male

text: Sample 8947


IA Sample 9033

characteristic: ENA-CHECKLIST

text: ICL-CFB

text: public

characteristic: INSDC status

text: Punjabi

text: Sikh

text: IA Sample 9033

text: human

text: India

text: Homo sapiens

text: Homo sapiens

text: male

characteristic: sex

text: Sample 9033


IA Sample 9039

text: ICL-CFB

text: public

text: Malayalam

characteristic: Language

text: Hindu

characteristic: Religion

text: IA Sample 9039

text: human

text: India

text: This individual is a 41 year old male of South-Asian origin (Country of Birth: India). They are Hindu, and their first language is Malayalam.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 9039

characteristic: title


IA Sample 9058

characteristic: ENA-FIRST-PUBLIC

text: ICL-CFB

text: public

text: Punjabi

text: Christian

characteristic: SRA accession

text: IA Sample 9058

characteristic: Submitter Id

text: human

text: Pakistan

text: This individual is a 40 year old male of South-Asian origin (Country of Birth: Pakistan). They are Christian, and their first language is Punjabi.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 9058


IA Sample 9062

characteristic: ENA-LAST-UPDATE

text: ICL-CFB

text: public

text: Hindi

text: Hindu

text: IA Sample 9062

characteristic: age

text: human

characteristic: common name

text: India

text: This individual is a 69 year old male of South-Asian origin (Country of Birth: India). They are Hindu, and their first language is Hindi.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 9062


IA Sample 9146

characteristic: External Id

text: ICL-CFB

characteristic: INSDC center name

text: public

text: Urdu

text: Muslim

text: IA Sample 9146

text: human

text: Pakistan

characteristic: country of birth

text: This individual is a 47 year old male of South-Asian origin (Country of Birth: Pakistan). They are Muslim, and their first language is Urdu.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 9146


IA Sample 9177

text: ICL-CFB

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Punjabi

text: Sikh

text: IA Sample 9177

text: human

text: India

text: This individual is a 46 year old male of South-Asian origin (Country of Birth: India). They are Sikh, and their first language is Punjabi.

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 9177


IA Sample 9217

characteristic: ENA-CHECKLIST

text: ICL-CFB

text: public

characteristic: INSDC status

text: Konkani

text: Christian

text: IA Sample 9217

text: human

text: India

text: This individual is a 44 year old male of South-Asian origin (Country of Birth: India). They are Christian, and their first language is Konkani.

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: male

text: Sample 9217


IA Sample 9239

text: ICL-CFB

text: public

text: Tamil

characteristic: Language

text: Hindu

characteristic: Religion

text: IA Sample 9239

text: human

text: India

text: This individual is a 39 year old male of South-Asian origin (Country of Birth: India). They are Hindu, and their first language is Tamil.

text: Homo sapiens

text: Homo sapiens

text: male

characteristic: sex

text: Sample 9239


IA Sample 9305

characteristic: ENA-FIRST-PUBLIC

text: ICL-CFB

text: public

text: Marathi

text: Hindu

characteristic: SRA accession

text: IA Sample 9305

text: human

text: India

text: This individual is a 42 year old male of South-Asian origin (Country of Birth: India). They are Hindu, and their first language is Marathi.

text: Homo sapiens

text: Homo sapiens

text: male

text: Sample 9305

characteristic: title