text: UPPSALA UNIVERSITET

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Bjorn Brunstrom

text: chicken

text: Female5Brain White Leghorn chicken embryo

text: 18 day embryo

text: Sweden

text: Gallus gallus

text: Gallus gallus

text: female

text: White Leghorn

text: brain

text: White Leghorn

characteristic: variety


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UPPSALA UNIVERSITET

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:UPPSALA UNIVERSITET

text: Bjorn Brunstrom

characteristic: collected by

text: chicken

characteristic: common name

text: Female5Liver White Leghorn chicken embryo

characteristic: description

text: 18 day embryo

characteristic: dev stage

text: Sweden

characteristic: geographic location (country and/or sea)

text: Gallus gallus

characteristic: organism

text: Gallus gallus

text: female

characteristic: sex

text: White Leghorn

characteristic: strain

text: liver

characteristic: tissue type

characteristic: title

text: White Leghorn


E-MTAB-3037_2:Sample 5

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-3037_2:Sample 5

tag: Namespace:Laboratory of Genetics - Gage The Salk Institute for Biological Studies

characteristic: Submitter Id

text: 1 year

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Primary human fibroblasts

characteristic: cell type

text: human

text: X1yr_O6__F_Scramble Protocols: Trizol-LS and RNeasy mini TruSeq stranded mRNA (Illumina)

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Sample 5


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UPPSALA UNIVERSITET

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Bjorn Brunstrom

characteristic: collected by

text: chicken

text: Female3Brain White Leghorn chicken embryo

text: 18 day embryo

text: Sweden

text: Gallus gallus

text: Gallus gallus

text: female

text: White Leghorn

text: brain

text: White Leghorn

characteristic: variety


text: UPPSALA UNIVERSITET

text: public

text: Bjorn Brunstrom

text: chicken

characteristic: common name

text: Female3Bursa White Leghorn chicken embryo

characteristic: description

text: 18 day embryo

characteristic: dev stage

text: Sweden

characteristic: geographic location (country and/or sea)

text: Gallus gallus

characteristic: organism

text: Gallus gallus

text: female

characteristic: sex

text: White Leghorn

characteristic: strain

text: bursa

characteristic: tissue type

text: White Leghorn


text: UPPSALA UNIVERSITET

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Bjorn Brunstrom

text: chicken

text: Female3Heart White Leghorn chicken embryo

text: 18 day embryo

text: Sweden

text: Gallus gallus

text: Gallus gallus

text: female

text: White Leghorn

text: heart

characteristic: title

text: White Leghorn


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UPPSALA UNIVERSITET

characteristic: INSDC center name

text: public

text: Bjorn Brunstrom

text: chicken

text: Female3Kidney White Leghorn chicken embryo

text: 18 day embryo

text: Sweden

text: Gallus gallus

text: Gallus gallus

text: female

text: White Leghorn

text: kidney

text: White Leghorn


text: UPPSALA UNIVERSITET

characteristic: INSDC first public

text: public

text: Bjorn Brunstrom

characteristic: collected by

text: chicken

characteristic: common name

text: Female3Liver White Leghorn chicken embryo

characteristic: description

text: 18 day embryo

text: Sweden

text: Gallus gallus

text: Gallus gallus

text: female

text: White Leghorn

text: liver

text: White Leghorn

characteristic: variety


text: UPPSALA UNIVERSITET

text: public

text: Bjorn Brunstrom

text: chicken

text: Female3Lung White Leghorn chicken embryo

text: 18 day embryo

characteristic: dev stage

text: Sweden

characteristic: geographic location (country and/or sea)

text: Gallus gallus

characteristic: organism

text: Gallus gallus

text: female

characteristic: sex

text: White Leghorn

characteristic: strain

text: lung

text: White Leghorn


text: UPPSALA UNIVERSITET

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Bjorn Brunstrom

text: chicken

text: Female3Muscle White Leghorn chicken embryo

text: 18 day embryo

text: Sweden

text: Gallus gallus

text: Gallus gallus

text: female

text: White Leghorn

text: muscle

characteristic: tissue type

text: White Leghorn


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UPPSALA UNIVERSITET

text: public

text: Bjorn Brunstrom

text: chicken

text: Female3Ovarium White Leghorn chicken embryo

text: 18 day embryo

text: Sweden

text: Gallus gallus

text: Gallus gallus

text: female

text: White Leghorn

text: ovary

characteristic: title

text: White Leghorn


text: UPPSALA UNIVERSITET

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Bjorn Brunstrom

characteristic: collected by

text: chicken

characteristic: common name

text: Female3Spleen White Leghorn chicken embryo

characteristic: description

text: 18 day embryo

text: Sweden

text: Gallus gallus

text: Gallus gallus

text: female

text: White Leghorn

text: spleen

text: White Leghorn


text: Mus musculus

characteristic: ArrayExpress-Species

text: SC

text: public

text: house mouse

text: Mus musculus

characteristic: organism

text: Mus musculus


text: Dracunculus medinensis

text: SC

characteristic: INSDC last update

text: public

text: Guinea worm

text: Dracunculus medinensis

text: Dracunculus medinensis


text: IPK-Gatersleben

text: public

characteristic: INSDC status

text: domesticated barley

text: Sequencing of barley BACs, that constitute the MTP of chromosome 3H

text: Hordeum vulgare subsp. vulgare

text: Hordeum vulgare subsp. vulgare


text: SC

text: public

characteristic: SRA accession

text: human

text: Homo sapiens

text: DNA library from AML Relapsed Human Samples

characteristic: sample description

text: Homo sapiens


text: EBI

text: public

characteristic: Submitter Id

text: ENA

characteristic: broker name

text: human

text: Homo sapiens

text: Homo sapiens

text: BioSample entry for 959 kb between AML1 and CBR1 on chromosome 21q22


Human chromosome 14

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Human chromosome 14

text: ENA

text: human

text: Homo sapiens

text: Homo sapiens

text: BioSample entry for Human chromosome 14


Rattus norvegicus chromosome 20

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

text: public

text: Rattus norvegicus chromosome 20

text: ENA

text: Norway rat

text: Rattus norvegicus

text: Rattus norvegicus

text: Brown Norway, BN/ssNHsd

characteristic: strain

text: BioSample entry for Rattus norvegicus chromosome 20


Human chromosome X

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Human chromosome X

text: ENA

text: human

text: Homo sapiens

text: Homo sapiens

text: BioSample entry for Human chromosome X

characteristic: title


Dicentrarchus labrax linkage groupe 5

text: EBI

text: public

text: Dicentrarchus labrax linkage groupe 5

text: ENA

text: European seabass

characteristic: common name

text: Dicentrarchus labrax

text: Dicentrarchus labrax

text: BioSample entry for Dicentrarchus labrax linkage groupe 5


E-MTAB-3382:Pig 2 Left Leg Tumor

text: University of Illinois

text: public

text: E-MTAB-3382:Pig 2 Left Leg Tumor

tag: Namespace:University of Illinois

text: 6 week

characteristic: age

text: ArrayExpress

text: pig

text: Protocols: Collection of muscle samples from transgenic pigs Anesthetized (TKX, 1 ml/50 lbs) and injected with AdCre precipitate intramuscularly High-quality RNA (1 μg) was used to generate TruSeq Stranded RNA-seq libraries (TruSeq Stranded RNA Sample Preparation Kit, Illumina, San Diego, CA, USA) following standard protocols.

characteristic: description

text: transgenic induced cancer

characteristic: disease

text: Cre recombinase inducible KRAS G12D and TP53 R17H

characteristic: genotype

text: Sus scrofa

text: Sus scrofa

text: skeletal muscle

characteristic: organism part

text: Sus scrofa

text: Pig 2 Left Leg Tumor

type: has member


E-MTAB-3382:Pig 2 Left Leg Muscle

text: University of Illinois

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-3382:Pig 2 Left Leg Muscle

text: 6 week

text: ArrayExpress

text: pig

text: Protocols: Collection of muscle samples from transgenic pigs High-quality RNA (1 μg) was used to generate TruSeq Stranded RNA-seq libraries (TruSeq Stranded RNA Sample Preparation Kit, Illumina, San Diego, CA, USA) following standard protocols.

text: normal

text: Sus scrofa

characteristic: organism

text: Sus scrofa

text: skeletal muscle

text: Sus scrofa

text: Pig 2 Left Leg Muscle


E-MTAB-3382:Pig 2 Right Leg Muscle

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: University of Illinois

text: public

text: E-MTAB-3382:Pig 2 Right Leg Muscle

characteristic: Submitter Id

text: 6 week

text: ArrayExpress

characteristic: broker name

text: pig

text: normal

text: Sus scrofa

text: Sus scrofa

text: skeletal muscle

text: Sus scrofa

text: Pig 2 Right Leg Muscle


E-MTAB-3382:Pig 2 Right Leg Tumor

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Illinois

characteristic: INSDC center name

text: public

text: E-MTAB-3382:Pig 2 Right Leg Tumor

text: 6 week

text: ArrayExpress

text: pig

text: transgenic induced cancer

text: Sus scrofa

text: Sus scrofa

text: skeletal muscle

text: Sus scrofa

text: Pig 2 Right Leg Tumor


E-MTAB-3382:Pig 1 Right Leg tumor

text: University of Illinois

characteristic: INSDC first public

text: public

text: E-MTAB-3382:Pig 1 Right Leg tumor

text: 6 week

text: ArrayExpress

text: pig

characteristic: common name

text: transgenic induced cancer

text: Sus scrofa

text: Sus scrofa

text: skeletal muscle

text: Sus scrofa

text: Pig 1 Right Leg tumor

characteristic: title


E-MTAB-3382:Pig 1 Left Leg Tumor

text: University of Illinois

text: public

text: E-MTAB-3382:Pig 1 Left Leg Tumor

text: 6 week

characteristic: age

text: ArrayExpress

text: pig

characteristic: description

text: transgenic induced cancer

characteristic: disease

text: Sus scrofa

text: Sus scrofa

text: skeletal muscle

text: Sus scrofa

text: Pig 1 Left Leg Tumor


E-MTAB-3382:Pig 1 Left Leg Muscle

text: University of Illinois

characteristic: INSDC last update

text: public

text: E-MTAB-3382:Pig 1 Left Leg Muscle

text: 6 week

text: ArrayExpress

text: pig

text: normal

characteristic: genotype

text: Sus scrofa

text: Sus scrofa

text: skeletal muscle

characteristic: organism part

text: Sus scrofa

text: Pig 1 Left Leg Muscle


text: LAWRENCE BERKELEY LAB

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:LAWRENCE BERKELEY LAB

characteristic: collection date

text: coffee berry borer

text: 16S rRNA amplicon

text: Terrestrial

characteristic: environment (biome)

text: Living Plant

characteristic: environment (feature)

text: Coffea arabica

characteristic: environment (material)

text: Kenya

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: Hypothenemus hampei

characteristic: organism

text: Insects microbiome

characteristic: project name

text: Hypothenemus hampei

text: Illumina

characteristic: sequencing method

text: Nucleic acid sequence report


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LAWRENCE BERKELEY LAB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: coffee berry borer

characteristic: common name

text: 16S rRNA amplicon

characteristic: description

text: Terrestrial

text: Living Plant

text: Coffea arabica

text: Indonesia

text: host-associated

text: metagenome

text: Hypothenemus hampei

text: Insects microbiome

text: Hypothenemus hampei

text: Illumina

text: Nucleic acid sequence report

characteristic: title


text: LAWRENCE BERKELEY LAB

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

text: coffee berry borer

text: 16S rRNA amplicon

text: Terrestrial

characteristic: environment (biome)

text: Living Plant

characteristic: environment (feature)

text: C. congensis x C. canephora�

characteristic: environment (material)

text: India

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

text: metagenome

text: Hypothenemus hampei

text: Insects microbiome

text: Hypothenemus hampei

text: Illumina

text: Nucleic acid sequence report


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LAWRENCE BERKELEY LAB

text: public

text: coffee berry borer

text: 16S rRNA amplicon

text: Terrestrial

text: Living Plant

text: Coffea arabica

text: India

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: Hypothenemus hampei

characteristic: organism

text: Insects microbiome

characteristic: project name

text: Hypothenemus hampei

text: Illumina

characteristic: sequencing method

text: Nucleic acid sequence report


text: LAWRENCE BERKELEY LAB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: coffee berry borer

characteristic: common name

text: 16S rRNA amplicon

characteristic: description

text: Terrestrial

text: Living Plant

text: Laboratory diet

text: USA

text: host-associated

text: metagenome

text: Hypothenemus hampei

text: Insects microbiome

text: Hypothenemus hampei

text: Illumina

text: Nucleic acid sequence report

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: IPK-Gatersleben

text: public

text: domesticated barley

text: Hordeum vulgare subsp. vulgare

text: Hordeum vulgare subsp. vulgare


characteristic: ArrayExpress-Species

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: human

text: Homo sapiens

characteristic: sample description

text: Homo sapiens


text: LAWRENCE BERKELEY LAB

text: public

characteristic: collection date

text: coffee berry borer

text: 16S rRNA amplicon

text: Terrestrial

characteristic: environment (biome)

text: Living Plant

characteristic: environment (feature)

text: Coffea arabica var liman�

characteristic: environment (material)

text: Puerto Rico

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: Hypothenemus hampei

characteristic: organism

text: Insects microbiome

characteristic: project name

text: Hypothenemus hampei

text: Illumina

text: Nucleic acid sequence report


characteristic: ENA-CHECKLIST

text: LAWRENCE BERKELEY LAB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: coffee berry borer

characteristic: common name

text: 16S rRNA amplicon

characteristic: description

text: Terrestrial

text: Living Plant

text: Coffea arabica

text: USA

text: host-associated

text: metagenome

text: Hypothenemus hampei

text: Insects microbiome

text: Hypothenemus hampei

text: Illumina

characteristic: sequencing method

text: Nucleic acid sequence report

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LAWRENCE BERKELEY LAB

text: public

characteristic: collection date

text: coffee berry borer

text: 16S rRNA amplicon

text: Terrestrial

characteristic: environment (biome)

text: Living Plant

characteristic: environment (feature)

text: Coffea arabica

characteristic: environment (material)

text: Guatemala

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: host-associated

text: metagenome

text: Hypothenemus hampei

text: Insects microbiome

text: Hypothenemus hampei

text: Illumina

text: Nucleic acid sequence report


characteristic: ENA-CHECKLIST

text: LAWRENCE BERKELEY LAB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: coffee berry borer

text: 16S rRNA amplicon

text: Terrestrial

text: Living Plant

text: Coffea arabica

text: Mexico

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: Hypothenemus hampei

characteristic: organism

text: Insects microbiome

characteristic: project name

text: Hypothenemus hampei

text: Illumina

text: Nucleic acid sequence report


E-MTAB-3356:hESC culture2

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Harvard Medical School

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-3356:hESC culture2

tag: Namespace:Harvard Medical School

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: embryonic stem cell

characteristic: cell type

text: human

characteristic: common name

text: Protocols: hESCs were maintained and differentiated as previously described [Jiang, W. et al., Stem Cells 24:609-17, 2011]. ESC-derived DE or PPs were sorted as CD184+/CD117+ or CD24high/CD49 flow, respectively [Jiang, W. et al., Stem Cells 24:609-17, 2011].

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: hESC culture2

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Harvard Medical School

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ArrayExpress

text: human

text: Protocols: Islet and exocrine cells were sorted as previously described [Dorrell, C. et al. Diabetologia 54(11):2832-44, 2011].

text: Homo sapiens

text: Homo sapiens

text: islet

characteristic: organism part

text: Homo sapiens


E-MTAB-3356:hESC culture4

characteristic: ENA-FIRST-PUBLIC

text: Harvard Medical School

text: public

text: E-MTAB-3356:hESC culture4

text: ArrayExpress

text: embryonic stem cell

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Homo sapiens

text: hESC culture4


E-MTAB-3356:hESC culture5

characteristic: ENA-LAST-UPDATE

text: Harvard Medical School

text: public

characteristic: INSDC status

text: E-MTAB-3356:hESC culture5

text: ArrayExpress

text: embryonic stem cell

text: human

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: hESC culture5


E-MTAB-3356:hESC culture6

text: Harvard Medical School

text: public

characteristic: SRA accession

text: E-MTAB-3356:hESC culture6

characteristic: Submitter Id

text: ArrayExpress

text: embryonic stem cell

text: human

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: hESC culture6


E-MTAB-3356:hESC culture3

text: Harvard Medical School

text: public

text: E-MTAB-3356:hESC culture3

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: embryonic stem cell

text: human

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: hESC culture3


E-MTAB-3356:hESC culture1

text: Harvard Medical School

text: public

text: E-MTAB-3356:hESC culture1

text: ArrayExpress

text: embryonic stem cell

characteristic: cell type

text: human

characteristic: common name

text: Protocols: hESCs were maintained and differentiated as previously described [Jiang, W. et al., Stem Cells 24:609-17, 2011]. ESCs were sorted as SSEA4+/CD184- population from cultured undifferentiated hESCs.

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: hESC culture1


text: public

tag: Namespace:Institute for molecular and tumor biology Philipps University  Marburg Germany

text: ArrayExpress

text: monocyte derived macrophage

text: human

text: Protocols: Cells were isolated on June 06th 2013 from healthy human donor blood of unknown gender via LSM1077 gradient centrifugation. Adherent cells were positivly selected on primaria 6 well dishes (3x10^6 monocytes per well in 2 ml PBS (PAA)) followed by 6 washing steps with PBS. Finally the monocytes were cultured for 6d in humidified incubator at 37 °C, 5 % CO2 in 2ml RPMI medium supplemented with 10 % FCS (both PAA). Cells were treated with control (DMSO), L165 1 µM final concentration or PTS-264 1 µM final concentration for 1d. Cells were lysed in Peqgold (TRIzol-like solution based on phenol and chloroform). RNA was digested with DNase (MN) and purified on a Qiagen Minelute column. Illumina-compatible libraries were made using the Epicentre Scriptseq human/mouse/rat low input Gold kit.

characteristic: description

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Institute for molecular and tumor biology Philipps University Marburg Germany

characteristic: INSDC center name

text: public

text: ArrayExpress

text: monocyte derived macrophage

text: human

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens


text: Human

characteristic: ArrayExpress-Species

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: human

text: Homo sapiens

text: Human Genomic DNA from multiple anonymous donors, Promega part no. G3041

characteristic: sample description

text: Homo sapiens


text: Mus musculus

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

text: public

characteristic: INSDC status

text: house mouse

text: Mus musculus

characteristic: organism

text: Mus musculus


text: Olfactory mucosa

characteristic: ArrayExpress-OrganismPart

text: Human

text: SC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: human

text: Homo sapiens

text: RNA from OE

text: Homo sapiens


text: University of Pennsylvania

text: public

tag: Namespace:University of Pennsylvania

text: ArrayExpress

characteristic: broker name

text: human

characteristic: common name

text: Protocols: Fluorescent activated cell sorting was performed on dispersed human islets using cell surface antibodies (1:20) and secondary antibodies (1:200, 115-116-075, 115-135- 164, Jackson-ImmunoResearch) to obtain cell populations highly enriched for alpha, beta, and exocrine cells based on: Dorrell, C. et al. Stem Cell Res1,183-194, doi:10.1016/j.scr.2008.04.001 (2008).

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: islet

characteristic: organism part

text: Homo sapiens


text: Plasmodium vivax

characteristic: ENA-CHECKLIST

characteristic: External Id

text: SC

text: public

text: malaria parasite P. vivax

text: Plasmodium vivax

text: Plasmodium vivax


text: Human

characteristic: ArrayExpress-Species

text: SC

characteristic: INSDC center name

text: public

text: human

text: Homo sapiens

text: RNA extracted from haemopoetic stem and progenitor cells

text: Homo sapiens


text: Plasmodium falciparum

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: malaria parasite P. falciparum

text: Plasmodium falciparum

text: Plasmodium falciparum


characteristic: ENA-FIRST-PUBLIC

text: COLD SPRING HARBOR L

text: public

tag: Namespace:COLD SPRING HARBOR L

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Pharyngula:Prim-5 - ZFS:0000029

characteristic: ArrayExpress-DevelopmentalStage

text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ArrayExpress-StrainOrLine

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically abnormal embryo from ZMP phenotype 177 clutch 1 obtained by crossing two fish homozygous for tert, allele sa6541. The homozygous adults were obtained by crossing parents heterozygous for tert, sa6541 and growing the quarter homozygous fish from the clutch.A 8 base indexing sequence (CGATGTTT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph177

characteristic: sample description

text: Danio rerio

text: mixed

characteristic: strain


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: zebrafish

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single phenotypically abnormal embryo from ZMP phenotype 177 clutch 1 obtained by crossing two fish homozygous for tert, allele sa6541. The homozygous adults were obtained by crossing parents heterozygous for tert, sa6541 and growing the quarter homozygous fish from the clutch.A 8 base indexing sequence (TTAGGCAT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph177

text: Danio rerio

text: mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-CHECKLIST

text: SC

text: public

text: zebrafish

characteristic: common name

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically abnormal embryo from ZMP phenotype 177 clutch 1 obtained by crossing two fish homozygous for tert, allele sa6541. The homozygous adults were obtained by crossing parents heterozygous for tert, sa6541 and growing the quarter homozygous fish from the clutch.A 8 base indexing sequence (ACAGTGGT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph177

text: Danio rerio

text: mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

characteristic: ArrayExpress-Species

text: mixed

characteristic: External Id

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically abnormal embryo from ZMP phenotype 177 clutch 1 obtained by crossing two fish homozygous for tert, allele sa6541. The homozygous adults were obtained by crossing parents heterozygous for tert, sa6541 and growing the quarter homozygous fish from the clutch.A 8 base indexing sequence (GCCAATGT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph177

text: Danio rerio

text: mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: mixed

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically abnormal embryo from ZMP phenotype 177 clutch 1 obtained by crossing two fish homozygous for tert, allele sa6541. The homozygous adults were obtained by crossing parents heterozygous for tert, sa6541 and growing the quarter homozygous fish from the clutch.A 8 base indexing sequence (ACTTGATG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph177

text: Danio rerio

text: mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC last update

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically abnormal embryo from ZMP phenotype 177 clutch 1 obtained by crossing two fish homozygous for tert, allele sa6541. The homozygous adults were obtained by crossing parents heterozygous for tert, sa6541 and growing the quarter homozygous fish from the clutch.A 8 base indexing sequence (GATCAGCG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph177

text: Danio rerio

text: mixed


text: Pharyngula:Prim-5 - ZFS:0000029

characteristic: ArrayExpress-DevelopmentalStage

text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically abnormal embryo from ZMP phenotype 177 clutch 1 obtained by crossing two fish homozygous for tert, allele sa6541. The homozygous adults were obtained by crossing parents heterozygous for tert, sa6541 and growing the quarter homozygous fish from the clutch.A 8 base indexing sequence (TAGCTTGT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph177

text: Danio rerio

text: mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically abnormal embryo from ZMP phenotype 177 clutch 1 obtained by crossing two fish homozygous for tert, allele sa6541. The homozygous adults were obtained by crossing parents heterozygous for tert, sa6541 and growing the quarter homozygous fish from the clutch.A 8 base indexing sequence (CTTGTACT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph177

characteristic: sample description

text: Danio rerio

text: mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: mixed

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically abnormal embryo from ZMP phenotype 178 clutch 1 obtained by crossing two fish homozygous for tert, allele sa6541. The homozygous adults were obtained by crossing parents heterozygous for tert, sa6541 and growing the quarter homozygous fish from the clutch.A 8 base indexing sequence (TGGTTGTT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph178

text: Danio rerio

text: mixed

characteristic: strain


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically abnormal embryo from ZMP phenotype 178 clutch 1 obtained by crossing two fish homozygous for tert, allele sa6541. The homozygous adults were obtained by crossing parents heterozygous for tert, sa6541 and growing the quarter homozygous fish from the clutch.A 8 base indexing sequence (TAAGCGTT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph178

text: Danio rerio

text: mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: Submitter Id

text: zebrafish

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single phenotypically abnormal embryo from ZMP phenotype 178 clutch 1 obtained by crossing two fish homozygous for tert, allele sa6541. The homozygous adults were obtained by crossing parents heterozygous for tert, sa6541 and growing the quarter homozygous fish from the clutch.A 8 base indexing sequence (TCCGTCTT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph178

text: Danio rerio

text: mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-CHECKLIST

text: SC

text: public

text: zebrafish

characteristic: common name

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically abnormal embryo from ZMP phenotype 178 clutch 1 obtained by crossing two fish homozygous for tert, allele sa6541. The homozygous adults were obtained by crossing parents heterozygous for tert, sa6541 and growing the quarter homozygous fish from the clutch.A 8 base indexing sequence (TCTGCTGT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph178

text: Danio rerio

text: mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

characteristic: ArrayExpress-Species

text: mixed

characteristic: External Id

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically abnormal embryo from ZMP phenotype 178 clutch 1 obtained by crossing two fish homozygous for tert, allele sa6541. The homozygous adults were obtained by crossing parents heterozygous for tert, sa6541 and growing the quarter homozygous fish from the clutch.A 8 base indexing sequence (TTGGAGGT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph178

text: Danio rerio

text: mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: mixed

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically abnormal embryo from ZMP phenotype 178 clutch 1 obtained by crossing two fish homozygous for tert, allele sa6541. The homozygous adults were obtained by crossing parents heterozygous for tert, sa6541 and growing the quarter homozygous fish from the clutch.A 8 base indexing sequence (TGATACGT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph178

text: Danio rerio

text: mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC last update

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically abnormal embryo from ZMP phenotype 178 clutch 1 obtained by crossing two fish homozygous for tert, allele sa6541. The homozygous adults were obtained by crossing parents heterozygous for tert, sa6541 and growing the quarter homozygous fish from the clutch.A 8 base indexing sequence (TGCATAGT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph178

text: Danio rerio

text: mixed


text: Pharyngula:Prim-5 - ZFS:0000029

characteristic: ArrayExpress-DevelopmentalStage

text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically abnormal embryo from ZMP phenotype 178 clutch 1 obtained by crossing two fish homozygous for tert, allele sa6541. The homozygous adults were obtained by crossing parents heterozygous for tert, sa6541 and growing the quarter homozygous fish from the clutch.A 8 base indexing sequence (TTGACTCT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph178

text: Danio rerio

text: mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically normal embryo from ZMP phenotype 190 clutch 1 obtained by crossing two fish homozygous for tert, allele sa6541. The homozygous adults were obtained by crossing parents heterozygous for tert, sa6541 and growing the quarter homozygous fish from the clutch.A 8 base indexing sequence (TTCCTGCT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph190

characteristic: sample description

text: Danio rerio

text: mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: mixed

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically normal embryo from ZMP phenotype 190 clutch 1 obtained by crossing two fish homozygous for tert, allele sa6541. The homozygous adults were obtained by crossing parents heterozygous for tert, sa6541 and growing the quarter homozygous fish from the clutch.A 8 base indexing sequence (TAGTGACT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph190

text: Danio rerio

text: mixed

characteristic: strain


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically normal embryo from ZMP phenotype 190 clutch 1 obtained by crossing two fish homozygous for tert, allele sa6541. The homozygous adults were obtained by crossing parents heterozygous for tert, sa6541 and growing the quarter homozygous fish from the clutch.A 8 base indexing sequence (TACAGGAT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph190

text: Danio rerio

text: mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: Submitter Id

text: zebrafish

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single phenotypically normal embryo from ZMP phenotype 190 clutch 1 obtained by crossing two fish homozygous for tert, allele sa6541. The homozygous adults were obtained by crossing parents heterozygous for tert, sa6541 and growing the quarter homozygous fish from the clutch.A 8 base indexing sequence (TGTGGTTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph190

text: Danio rerio

text: mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-CHECKLIST

text: SC

text: public

text: zebrafish

characteristic: common name

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically normal embryo from ZMP phenotype 190 clutch 1 obtained by crossing two fish homozygous for tert, allele sa6541. The homozygous adults were obtained by crossing parents heterozygous for tert, sa6541 and growing the quarter homozygous fish from the clutch.A 8 base indexing sequence (TAGTCTTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph190

text: Danio rerio

text: mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

characteristic: ArrayExpress-Species

text: mixed

characteristic: External Id

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically normal embryo from ZMP phenotype 190 clutch 1 obtained by crossing two fish homozygous for tert, allele sa6541. The homozygous adults were obtained by crossing parents heterozygous for tert, sa6541 and growing the quarter homozygous fish from the clutch.A 8 base indexing sequence (TTCCATTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph190

text: Danio rerio

text: mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: mixed

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically normal embryo from ZMP phenotype 190 clutch 1 obtained by crossing two fish homozygous for tert, allele sa6541. The homozygous adults were obtained by crossing parents heterozygous for tert, sa6541 and growing the quarter homozygous fish from the clutch.A 8 base indexing sequence (TAACGCTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph190

text: Danio rerio

text: mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC last update

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically normal embryo from ZMP phenotype 190 clutch 1 obtained by crossing two fish homozygous for tert, allele sa6541. The homozygous adults were obtained by crossing parents heterozygous for tert, sa6541 and growing the quarter homozygous fish from the clutch.A 8 base indexing sequence (TTGGTATG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph190

text: Danio rerio

text: mixed


text: Pharyngula:Prim-5 - ZFS:0000029

characteristic: ArrayExpress-DevelopmentalStage

text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically normal embryo from ZMP phenotype 191 clutch 1 obtained by crossing two fish wild type for tert, allele sa6541. The wild type adults were obtained by crossing parents heterozygous for tert, sa6541 and growing the quarter wild type fish from the clutch.A 8 base indexing sequence (TACTTCGG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph191

text: Danio rerio

text: mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically normal embryo from ZMP phenotype 191 clutch 1 obtained by crossing two fish wild type for tert, allele sa6541. The wild type adults were obtained by crossing parents heterozygous for tert, sa6541 and growing the quarter wild type fish from the clutch.A 8 base indexing sequence (TCTCACGG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph191

characteristic: sample description

text: Danio rerio

text: mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: mixed

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically normal embryo from ZMP phenotype 191 clutch 1 obtained by crossing two fish wild type for tert, allele sa6541. The wild type adults were obtained by crossing parents heterozygous for tert, sa6541 and growing the quarter wild type fish from the clutch.A 8 base indexing sequence (TAAGTTCG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph191

text: Danio rerio

text: mixed

characteristic: strain


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically normal embryo from ZMP phenotype 191 clutch 1 obtained by crossing two fish wild type for tert, allele sa6541. The wild type adults were obtained by crossing parents heterozygous for tert, sa6541 and growing the quarter wild type fish from the clutch.A 8 base indexing sequence (TCCAGTCG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph191

text: Danio rerio

text: mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: Submitter Id

text: zebrafish

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single phenotypically normal embryo from ZMP phenotype 191 clutch 1 obtained by crossing two fish wild type for tert, allele sa6541. The wild type adults were obtained by crossing parents heterozygous for tert, sa6541 and growing the quarter wild type fish from the clutch.A 8 base indexing sequence (TCATTGAG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph191

text: Danio rerio

text: mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-CHECKLIST

text: SC

text: public

text: zebrafish

characteristic: common name

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically normal embryo from ZMP phenotype 191 clutch 1 obtained by crossing two fish wild type for tert, allele sa6541. The wild type adults were obtained by crossing parents heterozygous for tert, sa6541 and growing the quarter wild type fish from the clutch.A 8 base indexing sequence (TGGCTCAG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph191

text: Danio rerio

text: mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

characteristic: ArrayExpress-Species

text: mixed

characteristic: External Id

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically normal embryo from ZMP phenotype 191 clutch 1 obtained by crossing two fish wild type for tert, allele sa6541. The wild type adults were obtained by crossing parents heterozygous for tert, sa6541 and growing the quarter wild type fish from the clutch.A 8 base indexing sequence (TATGCCAG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph191

text: Danio rerio

text: mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: mixed

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically normal embryo from ZMP phenotype 191 clutch 1 obtained by crossing two fish wild type for tert, allele sa6541. The wild type adults were obtained by crossing parents heterozygous for tert, sa6541 and growing the quarter wild type fish from the clutch.A 8 base indexing sequence (TACTAGTC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph191

text: Danio rerio

text: mixed


text: Pharyngula:Prim-5 - ZFS:0000029

text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC last update

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically normal embryo from ZMP phenotype 191 clutch 1 obtained by crossing two fish wild type for tert, allele sa6541. The wild type adults were obtained by crossing parents heterozygous for tert, sa6541 and growing the quarter wild type fish from the clutch.A 8 base indexing sequence (TTCAGCTC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph191

text: Danio rerio

text: mixed


text: Hatching:Long-pec - ZFS:0000033

characteristic: ArrayExpress-DevelopmentalStage

text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: ZMP_phenotype_188_1_phenotypic_1-sc-2249793

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for dmd, allele ta222a, from ZMP phenotype 188 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TGCGATCT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph188

text: Danio rerio

text: mixed


text: Hatching:Long-pec - ZFS:0000033

text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: ZMP_phenotype_188_1_phenotypic_3-sc-2249795

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for dmd, allele ta222a, from ZMP phenotype 188 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TAGTGACT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph188

characteristic: sample description

text: Danio rerio

text: mixed


text: Hatching:Long-pec - ZFS:0000033

text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: mixed

text: SC

text: public

text: ZMP_phenotype_188_1_phenotypic_4-sc-2249796

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for dmd, allele ta222a, from ZMP phenotype 188 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TACAGGAT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph188

text: Danio rerio

text: mixed

characteristic: strain


text: Hatching:Long-pec - ZFS:0000033

text: Whole embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ZMP_phenotype_188_1_phenotypic_5-sc-2249797

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for dmd, allele ta222a, from ZMP phenotype 188 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TCCTCAAT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph188

text: Danio rerio

text: mixed


text: Hatching:Long-pec - ZFS:0000033

text: Whole embryo

text: Danio rerio

text: mixed

text: SC

text: public

text: ZMP_phenotype_188_1_phenotypic_7-sc-2249799

characteristic: Submitter Id

text: zebrafish

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for dmd, allele ta222a, from ZMP phenotype 188 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TAGTCTTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph188

text: Danio rerio

text: mixed


text: Hatching:Long-pec - ZFS:0000033

text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-CHECKLIST

text: SC

text: public

text: ZMP_phenotype_188_1_phenotypic_8-sc-2249800

text: zebrafish

characteristic: common name

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for dmd, allele ta222a, from ZMP phenotype 188 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TTCCATTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph188

text: Danio rerio

text: mixed


text: Hatching:Long-pec - ZFS:0000033

text: Whole embryo

text: Danio rerio

characteristic: ArrayExpress-Species

text: mixed

characteristic: External Id

text: SC

text: public

text: ZMP_phenotype_188_1_phenotypic_10-sc-2249802

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for dmd, allele ta222a, from ZMP phenotype 188 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TAACGCTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph188

text: Danio rerio

text: mixed


text: Hatching:Long-pec - ZFS:0000033

text: Whole embryo

text: Danio rerio

text: mixed

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ZMP_phenotype_188_1_phenotypic_11-sc-2249803

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for dmd, allele ta222a, from ZMP phenotype 188 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TTGGTATG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph188

text: Danio rerio

text: mixed


text: Hatching:Long-pec - ZFS:0000033

text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC last update

text: public

text: ZMP_phenotype_188_1_non_phenotypic_1-sc-2249805

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped heterozygous embryo for dmd, allele ta222a, from ZMP phenotype 188 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TACTTCGG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph188

text: Danio rerio

text: mixed


text: Hatching:Long-pec - ZFS:0000033

characteristic: ArrayExpress-DevelopmentalStage

text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: ZMP_phenotype_188_1_non_phenotypic_2-sc-2249806

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped heterozygous embryo for dmd, allele ta222a, from ZMP phenotype 188 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TCTCACGG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph188

text: Danio rerio

text: mixed


text: Hatching:Long-pec - ZFS:0000033

text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: ZMP_phenotype_188_1_non_phenotypic_3-sc-2249807

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped heterozygous embryo for dmd, allele ta222a, from ZMP phenotype 188 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TCAGGAGG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph188

characteristic: sample description

text: Danio rerio

text: mixed


text: Hatching:Long-pec - ZFS:0000033

text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: mixed

text: SC

text: public

text: ZMP_phenotype_188_1_non_phenotypic_5-sc-2249809

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped heterozygous embryo for dmd, allele ta222a, from ZMP phenotype 188 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TCCAGTCG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph188

text: Danio rerio

text: mixed

characteristic: strain


text: Hatching:Long-pec - ZFS:0000033

text: Whole embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ZMP_phenotype_188_1_non_phenotypic_6-sc-2249810

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped heterozygous embryo for dmd, allele ta222a, from ZMP phenotype 188 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TGTATGCG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph188

text: Danio rerio

text: mixed


text: Hatching:Long-pec - ZFS:0000033

text: Whole embryo

text: Danio rerio

text: mixed

text: SC

text: public

text: ZMP_phenotype_188_1_non_phenotypic_8-sc-2249812

characteristic: Submitter Id

text: zebrafish

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single genotyped wild type embryo for dmd, allele ta222a, from ZMP phenotype 188 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TGGCTCAG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph188

text: Danio rerio

text: mixed


text: Hatching:Long-pec - ZFS:0000033

text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-CHECKLIST

text: SC

text: public

text: ZMP_phenotype_188_1_non_phenotypic_10-sc-2249814

text: zebrafish

characteristic: common name

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped wild type embryo for dmd, allele ta222a, from ZMP phenotype 188 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TCAGATTC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph188

text: Danio rerio

text: mixed


text: Hatching:Long-pec - ZFS:0000033

text: Whole embryo

text: Danio rerio

characteristic: ArrayExpress-Species

text: mixed

characteristic: External Id

text: SC

text: public

text: ZMP_phenotype_188_1_non_phenotypic_11-sc-2249815

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped wild type embryo for dmd, allele ta222a, from ZMP phenotype 188 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TACTAGTC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph188

text: Danio rerio

text: mixed


text: Hatching:Long-pec - ZFS:0000033

text: Whole embryo

text: Danio rerio

text: mixed

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ZMP_phenotype_188_1_non_phenotypic_12-sc-2249816

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped wild type embryo for dmd, allele ta222a, from ZMP phenotype 188 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TTCAGCTC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph188

text: Danio rerio

text: mixed


text: Segmentation:1-4 somites - ZFS:0000023

text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC last update

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for tfap2a, allele sa24445 from ZMP phenotype 162 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (GGTCGTGT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph162

text: Danio rerio

text: mixed


text: Segmentation:1-4 somites - ZFS:0000023

characteristic: ArrayExpress-DevelopmentalStage

text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for tfap2a, allele sa24445 from ZMP phenotype 162 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (GAATCTGT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph162

text: Danio rerio

text: mixed


text: Segmentation:1-4 somites - ZFS:0000023

text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for tfap2a, allele sa24445 from ZMP phenotype 162 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (GTACATCT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph162

characteristic: sample description

text: Danio rerio

text: mixed


text: Segmentation:1-4 somites - ZFS:0000023

text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: mixed

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for tfap2a, allele sa24445 from ZMP phenotype 162 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (GCATGGCT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph162

text: Danio rerio

text: mixed

characteristic: strain


text: Segmentation:1-4 somites - ZFS:0000023

text: Whole embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for tfap2a, allele sa24445 from ZMP phenotype 162 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (GTTAGCCT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph162

text: Danio rerio

text: mixed


text: Segmentation:1-4 somites - ZFS:0000023

text: Whole embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: Submitter Id

text: zebrafish

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for tfap2a, allele sa24445 from ZMP phenotype 162 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (GTCGCTAT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph162

text: Danio rerio

text: mixed


text: Segmentation:1-4 somites - ZFS:0000023

text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-CHECKLIST

text: SC

text: public

text: zebrafish

characteristic: common name

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for tfap2a, allele sa24445 from ZMP phenotype 162 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (GAGCCAAT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph162

text: Danio rerio

text: mixed


text: Segmentation:1-4 somites - ZFS:0000023

text: Whole embryo

text: Danio rerio

characteristic: ArrayExpress-Species

text: mixed

characteristic: External Id

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for tfap2a, allele sa24445 from ZMP phenotype 162 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (GCTCCTTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph162

text: Danio rerio

text: mixed


text: Segmentation:1-4 somites - ZFS:0000023

text: Whole embryo

text: Danio rerio

text: mixed

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for tfap2a, allele sa24445 from ZMP phenotype 162 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (GTAAGGTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph162

text: Danio rerio

text: mixed


text: Segmentation:1-4 somites - ZFS:0000023

text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC last update

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped heterozygous embryo for tfap2a, allele sa24445 from ZMP phenotype 162 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (GTTGTCGG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph162

text: Danio rerio

text: mixed


text: Segmentation:1-4 somites - ZFS:0000023

characteristic: ArrayExpress-DevelopmentalStage

text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped heterozygous embryo for tfap2a, allele sa24445 from ZMP phenotype 162 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (GGATTAGG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph162

text: Danio rerio

text: mixed


text: Segmentation:1-4 somites - ZFS:0000023

text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped heterozygous embryo for tfap2a, allele sa24445 from ZMP phenotype 162 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (GATAGAGG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph162

characteristic: sample description

text: Danio rerio

text: mixed


text: Segmentation:1-4 somites - ZFS:0000023

text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: mixed

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped heterozygous embryo for tfap2a, allele sa24445 from ZMP phenotype 162 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (GCAATCCG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph162

text: Danio rerio

text: mixed

characteristic: strain


text: Segmentation:1-4 somites - ZFS:0000023

text: Whole embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped wild type embryo for tfap2a, allele sa24445 from ZMP phenotype 162 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (GACCTTAG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph162

text: Danio rerio

text: mixed


text: Segmentation:1-4 somites - ZFS:0000023

text: Whole embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: Submitter Id

text: zebrafish

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single genotyped wild type embryo for tfap2a, allele sa24445 from ZMP phenotype 162 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (GCCTGTTC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph162

text: Danio rerio

text: mixed


text: Segmentation:1-4 somites - ZFS:0000023

text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-CHECKLIST

text: SC

text: public

text: zebrafish

characteristic: common name

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped wild type embryo for tfap2a, allele sa24445 from ZMP phenotype 162 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (GCTAACTC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph162

text: Danio rerio

text: mixed


text: Segmentation:1-4 somites - ZFS:0000023

text: Whole embryo

text: Danio rerio

characteristic: ArrayExpress-Species

text: mixed

characteristic: External Id

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped wild type embryo for tfap2a, allele sa24445 from ZMP phenotype 162 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (GATTCATC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph162

text: Danio rerio

text: mixed


E-MTAB-3312:Sample 1

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-3312:Sample 1

tag: Namespace:Sir William Dunn School of Pathology University of Oxford

text: ArrayExpress

characteristic: broker name

text: house mouse

text: BMDM1, control, uninfected macrophages Protocols: Bone marrow cells were harvested from C57BL/6 mice and matured in vitro in 20% L929 conditioned medium, resulting in cells expressing the murine macrophage markers F4/80 and MAC-1, whilst being negative for the granulocyte marker GR-1, as assessed by flow-cytometry. Macrophages were then cultured for 2 days in Dulbecco's Modified Eagle Medium (DMEM) before the start of the experiment. For mapping of splice acceptor sites and determination of transcript abundances, polyadenylated RNA was purified from total RNA, converted to cDNA using random hexamer primers, sheared and size selected for fragments ~200bp in length using the Illumina TruSeq RNA Sample Preparation Kit v2.

characteristic: description

text: not applicable (uninfected control)

characteristic: host

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 1

characteristic: title


E-MTAB-3312:Sample 7

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Sir William Dunn School of Pathology University of Oxford

characteristic: INSDC last update

text: public

text: E-MTAB-3312:Sample 7

text: ArrayExpress

text: house mouse

text: BMDM2, control, uninfected macrophages Protocols: Bone marrow cells were harvested from C57BL/6 mice and matured in vitro in 20% L929 conditioned medium, resulting in cells expressing the murine macrophage markers F4/80 and MAC-1, whilst being negative for the granulocyte marker GR-1, as assessed by flow-cytometry. Macrophages were then cultured for 2 days in Dulbecco's Modified Eagle Medium (DMEM) before the start of the experiment. For mapping of splice acceptor sites and determination of transcript abundances, polyadenylated RNA was purified from total RNA, converted to cDNA using random hexamer primers, sheared and size selected for fragments ~200bp in length using the Illumina TruSeq RNA Sample Preparation Kit v2.

text: not applicable (uninfected control)

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 7


E-MTAB-3312:Sample 8

text: public

characteristic: INSDC status

text: E-MTAB-3312:Sample 8

text: ArrayExpress

text: house mouse

text: BMDM3, control, uninfected macrophages Protocols: Bone marrow cells were harvested from C57BL/6 mice and matured in vitro in 20% L929 conditioned medium, resulting in cells expressing the murine macrophage markers F4/80 and MAC-1, whilst being negative for the granulocyte marker GR-1, as assessed by flow-cytometry. Macrophages were then cultured for 2 days in Dulbecco's Modified Eagle Medium (DMEM) before the start of the experiment. For mapping of splice acceptor sites and determination of transcript abundances, polyadenylated RNA was purified from total RNA, converted to cDNA using random hexamer primers, sheared and size selected for fragments ~200bp in length using the Illumina TruSeq RNA Sample Preparation Kit v2.

text: not applicable (uninfected control)

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 8


E-MTAB-3417:Adult pancreas islets

text: Massachusetts Institute of Technology

text: public

characteristic: SRA accession

text: E-MTAB-3417:Adult pancreas islets

tag: Namespace:Massachusetts Institute of Technology

text: ArrayExpress

text: house mouse

text: Protocols: Isolated islets were GFP sorted using mouse lines that expressed GFP with a minimal Pdx1 promoter. No MARIS sorting. After sorting, cells were pelleted by centrifugation at 3000 g for 5min at 4C. The supernatant was discarded. Total RNA was isolated from the pellet using the RecoverAll Total Nucleic Acid Isolation kit (Ambion), starting at the protease digestion stage of manufacturer-recommended protocol. The following modification to the isolation procedure was made: instead of incubating cells in digestion buffer for 15 minutes at 50C and 15 minutes at 80C, we carried out the incubation for 3 hours at 50C. Cell lysates were frozen at -80C overnight before continuing the RNA isolation by the manufacturer's instructions. NA

text: adult

characteristic: developmental stage

text: Mus musculus

text: Mus musculus

text: islet

characteristic: organism part

text: Mus musculus

text: Pdx1 minimal promoter-GFP on mixed/outbred background

characteristic: strain or line

text: Adult pancreas islets


E-MTAB-3417:P10 pancreas islets

characteristic: ENA-CHECKLIST

text: Massachusetts Institute of Technology

text: public

text: E-MTAB-3417:P10 pancreas islets

characteristic: Submitter Id

text: ArrayExpress

text: house mouse

characteristic: common name

text: Mus musculus

characteristic: organism

text: Mus musculus

text: islet

text: Mus musculus

text: P10 pancreas islets


E-MTAB-3418:P5 pancreas islets -2

characteristic: External Id

text: Massachusetts Institute of Technology

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-3418:P5 pancreas islets -2

characteristic: age

text: ArrayExpress

text: house mouse

text: Protocols: Islets were dispersed to a single cell suspension using TrypLE Express (Invitrogen). Cells were passed through a 40 um filter (BD Falcon 352340) and washed with PBS at least twice. Cells were fixed and permeabilized with 4% PFA (Electron Microscopy Sciences), 0.1% saponin (Sigma-Aldrich 47036) in molecular grade PBS (Ambion) supplemented with 1:100 RNasin Plus RNase Inhibitor (Promega, N2615) for 30min at 4C. All the subsequent steps were carried out at 4C. Cells were pelleted by centrifugation at 3000g for 3min at 4C and washed in Wash Buffer: PBS containing 0.2% BSA (Gemini Bio-Products), 0.1% saponin (Sigma-Aldrich), 1:100 RNasin Plus RNase Inihibitor. Primary antibody staining was carried out while 3D rocking for 30min at 4C in Staining buffer containing PBS with 1% BSA, 0.1% saponin and 1:25 RNasin Plus RNase Inhibitor (note that certain antibodies may require longer incubation times). Cells were washed twice in Wash Buffer followed by secondary antibody staining in Staining buffer. Following secondary antibody staining cells were washed twice in Wash buffer and resuspended in Sort buffer containing PBS, 0.5% BSA, and 1:25 RNasin Plus RNase Inhibitor. Fixation, washing, staining and sorting were performed at a concentration of 5-10 M cells/ml. (Hrvatin et al., PLoS ONE 2014) After sorting, cells were pelleted by centrifugation at 3000 g for 5min at 4C. The supernatant was discarded. Total RNA was isolated from the pellet using the RecoverAll Total Nucleic Acid Isolation kit (Ambion), starting at the protease digestion stage of manufacturer-recommended protocol. The following modification to the isolation procedure was made: instead of incubating cells in digestion buffer for 15 minutes at 50C and 15 minutes at 80C, we carried out the incubation for 3 hours at 50C. Cell lysates were frozen at -80C overnight before continuing the RNA isolation by the manufacturer's instructions. NA

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Swiss-Webster

characteristic: strain

text: P5 pancreas islets -2


E-MTAB-3418:P13 pancreas islets -1

characteristic: ENA-FIRST-PUBLIC

text: Massachusetts Institute of Technology

text: public

text: E-MTAB-3418:P13 pancreas islets -1

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: description

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Swiss-Webster

text: P13 pancreas islets -1

characteristic: title


E-MTAB-3418:P4 pancreas islets -2

characteristic: ENA-LAST-UPDATE

text: Massachusetts Institute of Technology

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-3418:P4 pancreas islets -2

text: ArrayExpress

text: house mouse

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Swiss-Webster

text: P4 pancreas islets -2


E-MTAB-3418:P5 pancreas islets -1

characteristic: ENA-CHECKLIST

text: Massachusetts Institute of Technology

text: public

text: E-MTAB-3418:P5 pancreas islets -1

text: ArrayExpress

text: house mouse

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Swiss-Webster

text: P5 pancreas islets -1


E-MTAB-3418:P4 pancreas islets -1

text: Massachusetts Institute of Technology

text: public

text: E-MTAB-3418:P4 pancreas islets -1

characteristic: Submitter Id

text: ArrayExpress

text: house mouse

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Swiss-Webster

text: P4 pancreas islets -1


E-MTAB-3418:E18.5 pancreas islets

text: Massachusetts Institute of Technology

text: public

text: E-MTAB-3418:E18.5 pancreas islets

text: ArrayExpress

text: house mouse

characteristic: common name

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Swiss-Webster

text: E18.5 pancreas islets


E-MTAB-3418:P13 pancreas islets -2

text: Massachusetts Institute of Technology

text: public

text: E-MTAB-3418:P13 pancreas islets -2

text: ArrayExpress

text: house mouse

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Mus musculus

text: Swiss-Webster

text: P13 pancreas islets -2


characteristic: External Id

text: The University of Manchester

text: public

tag: Namespace:The University of Manchester

text: ArrayExpress

text: baker's yeast

text: Protocols: Cycloheximide was added to a final concentration of 0.1 mg/ml, and yeast were harvested by centrifugation. Saccharomyces cerevisiae were lysed into polyribosomal buffer containing cyclohexamide and 9 OD260 units were loaded onto a sucrose gradient. 15-50% sucrose gradients were poured. 15 fractions were collected from each gradient. Fractions 4-8 were pooled to form the monosome sample and 10-15 were pooled to form the polysome sample. Grown in SCD-His media at 30oC to exponential phase (OD600 0.5-0.7). Samples lysed in Buffer A using a 6870 Freezer Mill (Spex). Lysates cleared by centrifuging twice at 15000 g. Nucleic acids extracted using Trizol Reagent. rRNA was depleted from samples using RibominusTM Eukaryote Kit for RNA-Seq (Invitrogen). Depleted samples were precipitated with 2.5x volumes ethanol, 1/10th volume 3M sodium acetate and 1μl glycogen, washed twice with 70% ethanol and re-suspended in 10 μl DEPC water. Sequencing libraries were generated using the whole Transcriptome Library preparation protocol provided with the SOLiD® Total RNA-Seq Kit.

text: Polysome-associated RNA

characteristic: fraction

text: Mat a; his3 1; leu2 0; met15 0; ura3 0

characteristic: genotype

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Mat a

characteristic: sex

text: fresh specimen

characteristic: specimen with known storage state


characteristic: ENA-FIRST-PUBLIC

text: The University of Manchester

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ArrayExpress

text: baker's yeast

text: Monosome-associated RNA

text: Mat a; his3 1; leu2 0; met15 0; ura3 0; YLL013c::kanMX4

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Mat a

text: fresh specimen

characteristic: strain


characteristic: ENA-LAST-UPDATE

text: The University of Manchester

text: public

text: ArrayExpress

characteristic: broker name

text: baker's yeast

characteristic: description

text: Monosome-associated RNA

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Mat a

text: fresh specimen

characteristic: title


characteristic: ENA-CHECKLIST

text: The University of Manchester

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ArrayExpress

text: baker's yeast

text: Polysome-associated RNA

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Mat a

text: fresh specimen


text: Cell Line

characteristic: ArrayExpress-Phenotype

text: Mus musculus

characteristic: ArrayExpress-Species

characteristic: External Id

text: SC

text: public

characteristic: Submitter Id

text: house mouse

characteristic: common name

text: Mus musculus

characteristic: organism

text: Mus musculus


text: Plasmodium falciparum

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC center name

text: public

text: malaria parasite P. falciparum

text: Plasmodium falciparum

text: Plasmodium falciparum


text: Pharyngula:Prim-5 ZFS:0000029 - Prim-15 ZFS:0000029

characteristic: ArrayExpress-DevelopmentalStage

text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

characteristic: INSDC first public

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for kitlga, allele tc244b from ZMP phenotype 155 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TGCGATCT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph155

characteristic: sample description

text: Danio rerio

text: mixed

characteristic: strain


text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: SC

characteristic: INSDC last update

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for kitlga, allele tc244b from ZMP phenotype 155 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TAGTGACT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph155

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for kitlga, allele tc244b from ZMP phenotype 155 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TACAGGAT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph155

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

characteristic: ArrayExpress-Species

text: mixed

characteristic: External Id

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for kitlga, allele tc244b from ZMP phenotype 155 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TCCTCAAT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph155

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: Submitter Id

text: zebrafish

characteristic: common name

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for kitlga, allele tc244b from ZMP phenotype 155 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TGTGGTTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph155

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: zebrafish

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for kitlga, allele tc244b from ZMP phenotype 155 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TAGTCTTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph155

text: Danio rerio

text: mixed


characteristic: ArrayExpress-DevelopmentalStage

text: Whole embryo

text: Danio rerio

text: mixed

text: SC

characteristic: INSDC center name

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for kitlga, allele tc244b from ZMP phenotype 155 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TTCCATTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph155

text: Danio rerio

text: mixed


text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for kitlga, allele tc244b from ZMP phenotype 155 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TCGAAGTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph155

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

text: SC

characteristic: INSDC first public

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for kitlga, allele tc244b from ZMP phenotype 155 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TTGGTATG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph155

characteristic: sample description

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-CHECKLIST

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for kitlga, allele tc244b from ZMP phenotype 155 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TGAACTGG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph155

text: Danio rerio

text: mixed

characteristic: strain


text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-LAST-UPDATE

text: SC

characteristic: INSDC last update

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for mitfa, allele w2 from ZMP phenotype 155 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TACTTCGG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph155

text: Danio rerio

text: mixed