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text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345518-sc-2012-05-25T10:46:34Z-1419650

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345546-sc-2012-05-25T10:47:10Z-1419678

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345481-sc-2012-05-25T10:46:02Z-1419613

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345465-sc-2012-05-25T10:45:50Z-1419597

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345547-sc-2012-05-25T10:47:10Z-1419679

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345491-sc-2012-05-25T10:46:10Z-1419623

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345521-sc-2012-05-25T10:46:36Z-1419653

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345480-sc-2012-05-25T10:46:01Z-1419612

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345464-sc-2012-05-25T10:45:49Z-1419596

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345478-sc-2012-05-25T10:46:00Z-1419610

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345549-sc-2012-05-25T10:47:12Z-1419681

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345520-sc-2012-05-25T10:46:36Z-1419652

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345548-sc-2012-05-25T10:47:11Z-1419680

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345479-sc-2012-05-25T10:46:01Z-1419611

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345492-sc-2012-05-25T10:46:11Z-1419624

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345495-sc-2012-05-25T10:46:17Z-1419627

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345459-sc-2012-05-25T10:45:43Z-1419591

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345536-sc-2012-05-25T10:46:49Z-1419668

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345530-sc-2012-05-25T10:46:45Z-1419662

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345515-sc-2012-05-25T10:46:31Z-1419647

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345516-sc-2012-05-25T10:46:32Z-1419648

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345477-sc-2012-05-25T10:45:59Z-1419609

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345551-sc-2012-05-25T10:47:13Z-1419683

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345494-sc-2012-05-25T10:46:13Z-1419626

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345531-sc-2012-05-25T10:46:45Z-1419663

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345535-sc-2012-05-25T10:46:48Z-1419667

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345460-sc-2012-05-25T10:45:44Z-1419592

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345550-sc-2012-05-25T10:47:13Z-1419682

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345517-sc-2012-05-25T10:46:33Z-1419649

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345476-sc-2012-05-25T10:45:59Z-1419608

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345532-sc-2012-05-25T10:46:46Z-1419664

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345534-sc-2012-05-25T10:46:48Z-1419666

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345497-sc-2012-05-25T10:46:18Z-1419629

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345475-sc-2012-05-25T10:45:58Z-1419607

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345461-sc-2012-05-25T10:45:44Z-1419593

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345552-sc-2012-05-25T10:47:15Z-1419684

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345514-sc-2012-05-25T10:46:31Z-1419646

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345474-sc-2012-05-25T10:45:57Z-1419606

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345463-sc-2012-05-25T10:45:46Z-1419595

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345533-sc-2012-05-25T10:46:47Z-1419665

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345496-sc-2012-05-25T10:46:17Z-1419628

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345462-sc-2012-05-25T10:45:45Z-1419594

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345525-sc-2012-05-25T10:46:40Z-1419657

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345541-sc-2012-05-25T10:47:06Z-1419673

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345485-sc-2012-05-25T10:46:05Z-1419617

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345499-sc-2012-05-25T10:46:20Z-1419631

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345473-sc-2012-05-25T10:45:56Z-1419605

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345484-sc-2012-05-25T10:46:05Z-1419616

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345526-sc-2012-05-25T10:46:41Z-1419658

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345527-sc-2012-05-25T10:46:42Z-1419659

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345513-sc-2012-05-25T10:46:30Z-1419645

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345540-sc-2012-05-25T10:46:53Z-1419672

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345498-sc-2012-05-25T10:46:19Z-1419630

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345502-sc-2012-05-25T10:46:22Z-1419634

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345511-sc-2012-05-25T10:46:29Z-1419643

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345539-sc-2012-05-25T10:46:52Z-1419671

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345471-sc-2012-05-25T10:45:55Z-1419603

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345528-sc-2012-05-25T10:46:43Z-1419660

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345512-sc-2012-05-25T10:46:29Z-1419644

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345510-sc-2012-05-25T10:46:28Z-1419642

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345458-sc-2012-05-25T10:45:41Z-1419590

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345537-sc-2012-05-25T10:46:50Z-1419669

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345501-sc-2012-05-25T10:46:21Z-1419633

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345500-sc-2012-05-25T10:46:20Z-1419632

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345538-sc-2012-05-25T10:46:51Z-1419670

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345472-sc-2012-05-25T10:45:56Z-1419604

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Saccharomyces cerevisiae

text: SC

text: public

text: 2014STDY5345529-sc-2012-05-25T10:46:44Z-1419661

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Mus Musculus

text: SC

text: public

text: SC_SMN5367634-sc-2012-07-02T10:05:25Z-1445861

text: house mouse

text: Mus musculus

text: Mus musculus


text: public

characteristic: StrainOrLine

tag: Namespace:Cambridge Research Institute Genomics Core Facility

text: 4 to 6 month

characteristic: age

characteristic: bio source type

text: ArrayExpress

characteristic: broker name

text: house mouse

text: Protocols: All mice used in this study were housed and handled in accordance with the Animals (Scientific Procedures) Act 1986. Mice were housed and cared for in the Cambridge Research Institute Biological Resource Unit with a twelve hour light/dark cycle, and were provided with chow food from Lab Diet plus water ad libitum. Mice were sacrificed by cervical dislocation at 4-6 months of age, between the hours of 9:30am and 11:30am. The liver was then cut and the mouse perfused with PBS by injection into the heart. Subsequently, the liver was removed and the gall bladder and hepatic vein cut away. A sample of approximately 50mg-100mg was taken from a single liver lobe and frozen on liquid nitrogen for storage at -80C until use. For each liver sample, total RNA was extracted using the RNeasy Mini kit (Qiagen 74104) as per manufacturer’s instructions. Before further processing, each total RNA sample was treated to digest contaminating DNA. From each sample, polyadenylated mRNA was enriched from the total RNA using the PolyATract mRNA isolation system.

characteristic: description

text: Mus musculus

text: Mus musculus

text: liver

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: title

type: has member


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Cambridge Research Institute Genomics Core Facility

text: public

text: CAST/EiJ x C57BL/6J

text: 4 to 6 month

text: ArrayExpress

text: house mouse

text: Mus musculus

text: Mus musculus

text: liver

text: Mus musculus

text: male


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: C57BL/6J x CAST/EiJ

text: 4 to 6 month

text: ArrayExpress

text: house mouse

text: Mus musculus

text: Mus musculus

text: liver

text: Mus musculus

text: male


text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 4 to 6 month

text: ArrayExpress

text: house mouse

text: Mus musculus

text: Mus musculus

text: liver

text: Mus musculus

text: male


text: public

text: CAST/EiJ

characteristic: StrainOrLine

text: 4 to 6 month

text: ArrayExpress

text: house mouse

characteristic: common name

text: Mus musculus

characteristic: organism

text: Mus musculus

text: liver

text: Mus musculus

text: male


Igri

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

text: IPK-Gatersleben

text: public

text: Igri

text: domesticated barley

text: genomic DNA for whole genome shotgun sequencing, average fragment size approx. 300 bp

text: DNA from green seedlings

characteristic: isolation source

text: Hordeum vulgare subsp. vulgare

text: Hordeum vulgare subsp. vulgare

text: genomic DNA of cultivar Igri


Morex

text: SRA-Webin

text: IPK-Gatersleben

text: public

text: Morex

text: domesticated barley

characteristic: description

text: DNA from green seedlings

text: Hordeum vulgare subsp. vulgare

text: Hordeum vulgare subsp. vulgare

text: genomic DNA of cultivar Morex


Bowman

text: SRA-Webin

text: IPK-Gatersleben

text: public

text: Bowman

text: domesticated barley

text: DNA from green seedlings

text: Hordeum vulgare subsp. vulgare

text: Hordeum vulgare subsp. vulgare

text: genomic DNA of cultivar Bowman


Barke

text: SRA-Webin

text: IPK-Gatersleben

text: public

text: Barke

text: domesticated barley

text: DNA from green seedlings

text: Hordeum vulgare subsp. vulgare

text: Hordeum vulgare subsp. vulgare

text: genomic DNA of cultivar Barke


Haruna Nijo

text: SRA-Webin

text: IPK-Gatersleben

text: public

text: Haruna Nijo

text: domesticated barley

text: genomic DNA for whole genome shotgun sequencing, average fragment size approx. 500 bp

text: DNA from green seedlings

text: Hordeum vulgare subsp. vulgare

text: Hordeum vulgare subsp. vulgare

text: genomic DNA of cultivar Haruna Nijo


text: male

characteristic: ArrayExpress-Sex

text: Mus Musculus

characteristic: ArrayExpress-Species

text: SC

text: public

text: SC_GCIM5351122-sc-2012-05-24T07:40:47Z-1425539

text: house mouse

text: Mus musculus

text: Mus musculus


text: male

text: Mus Musculus

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: SC_GCIM5351142-sc-2012-05-24T07:41:04Z-1425559

text: house mouse

text: Mus musculus

text: Mus musculus


text: male

text: Mus Musculus

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: SC_GCIM5351168-sc-2012-05-24T07:41:24Z-1425585

text: house mouse

text: Mus musculus

text: Mus musculus


text: male

text: Mus Musculus

characteristic: External Id

text: SC

text: public

text: SC_GCIM5351195-sc-2012-05-24T07:41:44Z-1425612

text: house mouse

text: Mus musculus

text: Mus musculus


text: male

text: Mus Musculus

text: SC

characteristic: INSDC center name

text: public

text: SC_GCIM5351161-sc-2012-05-24T07:41:19Z-1425578

text: house mouse

text: Mus musculus

text: Mus musculus


text: male

text: Mus Musculus

text: SC

characteristic: INSDC first public

text: public

text: SC_GCIM5351137-sc-2012-05-24T07:41:00Z-1425554

text: house mouse

text: Mus musculus

text: Mus musculus


text: UCL-Gen

characteristic: INSDC last update

text: public

text: ArrayExpress

characteristic: broker name

text: fission yeast

text: Protocols: Cells were harvested from liquid cultures at mid-exponential phase (OD = 0.5). Cells were grown in Yeast Extract medium + Supplements (YES; Moreno et al., 1991, Methods Enzymol. 194, 795-823.) or in Edinburgh Minimal Medium (EMM; Moreno et al., 1991, Methods Enzymol. 194, 795-823.) at 32C. Removal of the nitrogen source from the medium (EMM minus nitrogen) the cells arrest in G1 and enter a resistant stage quiescence. Total RNA was isolated from S. pombe cells using a hot phenol method followed by phenol-chloroform extractions, and precipitation as described (Lyne et al., 2003, BMC Genomics 4, 27.). 100ng total RNA was used as starting material for strand-specific RNA-seq library preparation using an unreleased early version provided by Illumina of the Illumina TruSeq Small RNA Sample Prep Kit. Briefly: Total RNA (NO poly(A) enrichment) was fragmented to an average size of 200nt. Fragmented RNA was 3prime de-phosphorylated with Antartic phosphatase and 5prime phosphorylated with polynucleotide kinase this treatment prepares RNA fragments for subsequent ligation of Illumina RNA adaptors to their 5prime and 3prime ends using a 3prime RNA ligase and a T4 RNA ligase, respectively. First strand cDNA was produced using a primer specific for the Illumina 3prime adaptor. The library was finally amplified with 15 cycles of PCR using primers specific for the Illumina adaptors and purified using SPRI-beads (Agencourt, Beckman Coulter). Libraries size distributions and concentrations were determined on an Agilent Bioanalyzer

text: 972 h-

characteristic: genotype

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe

characteristic: sex

characteristic: title


text: UCL-Gen

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: StrainOrLine

characteristic: Submitter Id

text: ArrayExpress

text: fission yeast

characteristic: common name

text: Protocols: Cells were harvested from liquid cultures at mid-exponential phase (OD = 0.5). Cells were grown in Yeast Extract medium + Supplements (YES; Moreno et al., 1991, Methods Enzymol. 194, 795-823.) or in Edinburgh Minimal Medium (EMM; Moreno et al., 1991, Methods Enzymol. 194, 795-823.) at 32C. Removal of the nitrogen source from the medium (EMM minus nitrogen) the cells arrest in G1 and enter a resistant stage quiescence. Total RNA was isolated from S. pombe cells using a hot phenol method followed by phenol-chloroform extractions, and precipitation as described (Lyne et al., 2003, BMC Genomics 4, 27.). 10ug total RNA was used as starting material for strand-specific RNA-seq library preparation using an unreleased early version provided by Illumina of the Illumina TruSeq Small RNA Sample Prep Kit. Briefly: poly(A)+ RNA was enriched by two rounds of poly(dT) Sera-Mag magnetic beads purification. Enriched poly(A)+ RNA was then fragmented to an average size of 200nt. Fragmented RNA was 3prime de-phosphorylated with Antartic phosphatase and 5prime phosphorylated with polynucleotide kinase this treatment prepares RNA fragments for subsequent ligation of Illumina RNA adaptors to their 5prime and 3prime ends using a 3prime RNA ligase and a T4 RNA ligase, respectively. First strand cDNA was produced using a primer specific for the Illumina 3prime adaptor. The library was finally amplified with 15 cycles of PCR using primers specific for the Illumina adaptors and purified using SPRI-beads (Agencourt, Beckman Coulter). Libraries size distributions and concentrations were determined on an Agilent Bioanalyzer

text: 972 h-

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe


text: Mus musculus

text: SC

text: public

text: SC_HESC5361027-sc-2013-08-27T17:24:46Z-1438895

text: house mouse

text: Mus musculus

characteristic: organism

text: Mus musculus


text: Mus musculus

characteristic: ArrayExpress-Species

text: SC

text: public

text: SC_HESC5361023-sc-2013-08-27T17:24:15Z-1438891

text: house mouse

text: Mus musculus

text: Mus musculus


text: Mus musculus

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: SC_HESC5361021-sc-2013-08-27T17:23:58Z-1438889

text: house mouse

text: Mus musculus

text: Mus musculus


text: Mus musculus

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: SC_HESC5368022-sc-2013-08-27T17:25:55Z-1446297

text: house mouse

text: Mus musculus

text: Mus musculus


text: Mus musculus

characteristic: External Id

text: SC

text: public

text: SC_HESC5368024-sc-2013-08-27T17:26:10Z-1446299

text: house mouse

text: Mus musculus

text: Mus musculus


text: Mus musculus

text: SC

characteristic: INSDC center name

text: public

text: SC_HESC5368021-sc-2013-08-27T17:25:43Z-1446296

text: house mouse

text: Mus musculus

text: Mus musculus


text: Mus musculus

text: SC

characteristic: INSDC first public

text: public

text: SC_HESC5361018-sc-2013-08-27T17:23:34Z-1438886

text: house mouse

text: Mus musculus

text: Mus musculus


text: Mus musculus

text: SC

characteristic: INSDC last update

text: public

text: SC_HESC5368018-sc-2013-08-27T17:25:19Z-1446293

text: house mouse

text: Mus musculus

text: Mus musculus


text: Mus musculus

text: SC

text: public

text: SC_HESC5361012-sc-2013-08-27T17:22:54Z-1438880

text: house mouse

text: Mus musculus

text: Mus musculus


text: Mus musculus

text: SC

text: public

text: SC_HESC5361025-sc-2013-08-27T17:24:31Z-1438893

text: house mouse

text: Mus musculus

text: Mus musculus


text: Mus musculus

text: SC

text: public

text: SC_HESC5361020-sc-2013-08-27T17:23:50Z-1438888

text: house mouse

text: Mus musculus

text: Mus musculus


text: Mus musculus

text: SC

text: public

text: SC_HESC5368019-sc-2013-08-27T17:25:27Z-1446294

text: house mouse

text: Mus musculus

text: Mus musculus


text: Mus musculus

text: SC

text: public

text: SC_HESC5361029-sc-2013-08-27T17:25:03Z-1438897

text: house mouse

text: Mus musculus

text: Mus musculus


text: Mus musculus

text: SC

text: public

text: SC_HESC5361022-sc-2013-08-27T17:24:07Z-1438890

text: house mouse

text: Mus musculus

text: Mus musculus


text: Mus musculus

text: SC

text: public

text: SC_HESC5361028-sc-2013-08-27T17:24:53Z-1438896

text: house mouse

text: Mus musculus

text: Mus musculus


text: Mus musculus

text: SC

text: public

text: SC_HESC5361010-sc-2013-08-27T17:22:37Z-1438878

text: house mouse

text: Mus musculus

text: Mus musculus


text: Mus musculus

text: SC

text: public

text: SC_HESC5361013-sc-2013-08-27T17:23:03Z-1438881

text: house mouse

text: Mus musculus

text: Mus musculus


text: Mus musculus

text: SC

text: public

text: SC_HESC5368023-sc-2013-08-27T17:26:03Z-1446298

text: house mouse

text: Mus musculus

text: Mus musculus


text: Mus musculus

text: SC

text: public

text: SC_HESC5361015-sc-2013-08-27T17:23:15Z-1438883

text: house mouse

text: Mus musculus

text: Mus musculus


text: Mus musculus

text: SC

text: public

text: SC_HESC5361017-sc-2013-08-27T17:23:25Z-1438885

text: house mouse

text: Mus musculus

text: Mus musculus


text: Mus musculus

text: SC

text: public

text: SC_HESC5368025-sc-2013-08-27T17:26:18Z-1446300

text: house mouse

text: Mus musculus

text: Mus musculus


text: Mus musculus

text: SC

text: public

text: SC_HESC5361019-sc-2013-08-27T17:23:42Z-1438887

text: house mouse

text: Mus musculus

text: Mus musculus


text: Mus musculus

text: SC

text: public

text: SC_HESC5361026-sc-2013-08-27T17:24:39Z-1438894

text: house mouse

text: Mus musculus

text: Mus musculus


text: Mus musculus

text: SC

text: public

text: SC_HESC5368020-sc-2013-08-27T17:25:35Z-1446295

text: house mouse

text: Mus musculus

text: Mus musculus


text: Mus musculus

text: SC

text: public

text: SC_HESC5361011-sc-2013-08-27T17:22:46Z-1438879

text: house mouse

text: Mus musculus

text: Mus musculus


text: Mus musculus

text: SC

text: public

text: SC_HESC5361024-sc-2013-08-27T17:24:23Z-1438892

text: house mouse

text: Mus musculus

text: Mus musculus


text: public

tag: Namespace:School of Biological Sciences, University of Bristol

text: ECACC

characteristic: biosourceprovider

text: ArrayExpress

characteristic: broker name

text: HeLa

characteristic: cell line

text: human

text: Protocols: HeLa cells were obtained from ECACC and grown in SILAC labelled DMEM with 10% v/v SILAC dialysed Foetal Calf Serum (Dundee Cell Products) for at least 5 population doublings. Cells were infected with wild type adenovirus serotype 5 at a multiplicity of infection of 30 Cells were re-suspended in 0.5ml 0.1% Triton X-100 to lyse the cytoplasm, nuclei were spun down and the cytoplasmic fraction was extracted with Trizol to obtain a total cytoplasmic RNA. Trizol extracted RNA was extracted again using RNAeasy (Qiagen)

characteristic: description

text: adenovirus infected

characteristic: disease state

text: NineHoursRead

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: NineHoursRead


text: School of Biological Sciences, University of Bristol

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ECACC

text: ArrayExpress

text: HeLa

text: human

text: adenovirus infected

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

characteristic: title


text: public

characteristic: Submitter Id

text: ECACC

text: ArrayExpress

text: HeLa

text: human

characteristic: common name

text: adenovirus infected

text: ZeroHoursRead

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Homo sapiens

text: ZeroHoursRead


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Wellcome Trust Sanger Institute

text: public

tag: Namespace:Wellcome Trust Sanger Institute

text: frozen sample

characteristic: bio source type

text: Clontech

text: ArrayExpress

text: human

text: Protocols: Human polyA+ RNAs were purchased from Clontech. The RNAs were isolated from tissue samples using a modified guanidium thiocynate extraction method followed by polyA+ RNA selection with two rounds of oligo(dT)-cellulose columns. We experimentally assessed three categories of gene models: (1) spliced models in which one primer could be placed within 75 nt of a junction and that will result in about half of the sequencing reads covering the junction (“Multi-span”); (2) spliced models in which this was unfeasible (“Multi”); and (3) monoexonic genes (“Mono”). In the case of “Multi-span” primers, the “junction primer” is positioned within an exon not more than 65 bp away from the targeted junction to ensure that sequencing reads will cross the junctions with a minimum of 10 nt, while the second primer maps within an adjacent exon. To increase the fraction of junctions we could possibly test, we then designed primer pairs further away from the junction (“Multi” primers). Primers were designed using Primer3. We used parameters minimizing the formation of primer dimers and maximizing primers “stickiness”. Primer pairs were further filtered for mapping within repeat-regions and alternative priming within 30 kb in duplications and paralogous sequences (maximum of two tolerated mismatches). First-strand cDNA samples were prepared from human poly(A)+ RNAs (BD-Clontech) with the SuperScript III kit (Invitrogen). Amplifications were performed in a final volume of 12.5 μL with JumpStart REDTaq ReadyMix (Sigma-Aldrich) and a primer concentration of 0.4 μM in 384-well plates format on an automatized Evoware platform (TECAN) combined with a Tetrad2 thermocycler (Bio-Rad) that allows processing four plates in parallel. Because monoexonic amplification is sensitive to genomic DNA contaminations, monoexonic models were assessed by amplification of cDNA in which a dNTP analog was incorporated using the mRNA Selective PCR Kit (TAKARA).

text: Homo sapiens

text: Homo sapiens

text: muscle

characteristic: organism part

text: Homo sapiens

text: male

characteristic: sex


characteristic: External Id

text: Wellcome Trust Sanger Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: frozen sample

text: Clontech

characteristic: biosourceprovider

text: ArrayExpress

text: human

text: Homo sapiens

text: Homo sapiens

text: liver

text: Homo sapiens

text: male


text: Wellcome Trust Sanger Institute

text: public

text: frozen sample

text: Clontech

text: ArrayExpress

characteristic: broker name

text: human

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: brain

text: Homo sapiens

text: male


text: Wellcome Trust Sanger Institute

text: public

characteristic: INSDC status

characteristic: SRA accession

text: frozen sample

text: Clontech

text: ArrayExpress

text: human

text: Homo sapiens

text: Homo sapiens

text: lung

text: Homo sapiens

text: mixed sex


text: Wellcome Trust Sanger Institute

text: public

characteristic: Submitter Id

text: frozen sample

text: Clontech

text: ArrayExpress

text: human

text: Homo sapiens

text: Homo sapiens

text: testis

text: Homo sapiens

text: male

characteristic: title


text: Wellcome Trust Sanger Institute

text: public

text: frozen sample

text: Clontech

text: ArrayExpress

text: human

characteristic: common name

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: heart

text: Homo sapiens

text: male


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Wellcome Trust Sanger Institute

text: public

text: frozen sample

text: Clontech

text: ArrayExpress

text: human

text: Homo sapiens

text: Homo sapiens

text: spleen

text: Homo sapiens

text: mixed sex


text: Wellcome Trust Sanger Institute

text: public

text: frozen sample

characteristic: bio source type

text: Clontech

text: ArrayExpress

text: human

text: Homo sapiens

text: Homo sapiens

text: kidney

characteristic: organism part

text: Homo sapiens

text: mixed sex


Lim

characteristic: External Id

text: ICT

text: public

text: Lim

text: eubacteria

text: Soil sample amended with naringin

text: PowerMax Soil DNA Isolation Kit (MoBio Laboratories Inc., USA)

characteristic: nucleic acid extraction

text: Bacteria

text: f: AYTGGGYDTAAAGNG; r: ACGGGCGGTGTGTRC

characteristic: pcr primers

text: 30 g

characteristic: sample size

text: Contaminated soil

characteristic: sample type

text: Bacteria

text: GS FLX+ (454 Life Sciences)

characteristic: sequencing method


Caf

text: ICT

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Caf

text: eubacteria

text: Soil sample amended with naringin

characteristic: description

text: Bacteria

text: f: AYTGGGYDTAAAGNG; r: ACGGGCGGTGTGTRC

text: 30 g

text: Contaminated soil

text: Bacteria

text: GS FLX+ (454 Life Sciences)


Nar

text: ICT

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Nar

characteristic: Submitter Id

text: eubacteria

text: Soil sample amended with naringin

text: Bacteria

text: f: AYTGGGYDTAAAGNG; r: ACGGGCGGTGTGTRC

text: 30 g

text: Contaminated soil

text: Bacteria

text: GS FLX+ (454 Life Sciences)


Ctr

characteristic: ENA-FIRST-PUBLIC

text: ICT

text: public

text: Ctr

text: eubacteria

characteristic: common name

text: Soil sample amended with no plant secondary metabolite

text: Bacteria

characteristic: organism

text: f: AYTGGGYDTAAAGNG; r: ACGGGCGGTGTGTRC

text: 30 g

text: Contaminated soil

text: Bacteria

text: GS FLX+ (454 Life Sciences)


characteristic: ENA-LAST-UPDATE

text: ICT

text: public

text: eubacteria

text: Control soil

text: Bacteria

text: f: AYTGGGYDTAAAGNG; r: ACGGGCGGTGTGTRC

text: Contaminated soil

text: Bacteria

text: GS FLX+ (454 Life Sciences)


characteristic: External Id

text: ICT

text: public

text: eubacteria

text: Tobacco vegetated soil, fertilized

text: Bacteria

text: f: AYTGGGYDTAAAGNG; r: ACGGGCGGTGTGTRC

text: Contaminated soil

text: Bacteria

text: GS FLX+ (454 Life Sciences)


text: ICT

text: public

text: eubacteria

text: Horseradish vegetated soil

characteristic: nucleic acid extraction

text: Bacteria

text: f: AYTGGGYDTAAAGNG; r: ACGGGCGGTGTGTRC

text: Contaminated soil

text: Bacteria

text: GS FLX+ (454 Life Sciences)


text: ICT

text: public

text: eubacteria

text: Horseradish vegetated soil, fertilized

text: Bacteria

text: f: AYTGGGYDTAAAGNG; r: ACGGGCGGTGTGTRC

characteristic: pcr primers

text: Contaminated soil

text: Bacteria

text: GS FLX+ (454 Life Sciences)


text: ICT

text: public

text: eubacteria

text: Tobacco vegetated soil

text: Bacteria

text: f: AYTGGGYDTAAAGNG; r: ACGGGCGGTGTGTRC

text: Contaminated soil

text: Bacteria

text: GS FLX+ (454 Life Sciences)


text: ICT

text: public

text: eubacteria

text: Control soil, fertilized

text: Bacteria

text: f: AYTGGGYDTAAAGNG; r: ACGGGCGGTGTGTRC

text: Contaminated soil

text: Bacteria

text: GS FLX+ (454 Life Sciences)


text: ICT

text: public

text: eubacteria

text: Nightshade vegetated soil, fertilized

text: Bacteria

text: f: AYTGGGYDTAAAGNG; r: ACGGGCGGTGTGTRC

text: Contaminated soil

text: Bacteria

text: GS FLX+ (454 Life Sciences)


text: ICT

text: public

text: eubacteria

text: Nightshade vegetated soil

text: Bacteria

text: f: AYTGGGYDTAAAGNG; r: ACGGGCGGTGTGTRC

text: Contaminated soil

text: Bacteria

text: GS FLX+ (454 Life Sciences)


text: BGI-Shenzhen, Shenzhen, China.

text: public

text: 4 years

characteristic: age

text: ArrayExpress

characteristic: broker name

text: sika deer

text: Protocols: Total RNA was isolated using TRIzol reagent (Invitrogen) according to the manufactures instructions.

text: ossification stage

characteristic: developmental stage

text: Cervus nippon

text: Cervus nippon

text: antler tip

characteristic: organism part

text: Cervus nippon

text: male

characteristic: sex

characteristic: title


text: GIS

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ArrayExpress

characteristic: cell line

text: embryonic stem cell

characteristic: cell type

text: human

text: Protocols: ChIP-SeqH1 hESCs were maintained as feeder-free culture on matri-gel (BD). The medium containing 20% KO serum replacement, 1 mM L-glutamine, 1% non-essential amino acids, 0.1 mM 2-mercaptoethanol and 4ng/ml basic fibroblast growth factor (Invitrogen) in DMEM/F12 (GIBCO) was conditioned with mitotically inactivated mouse embryonic fibroblast (MEF) for 24hrs. Additional 8ng/ml of basic fibroblast growth factor (Invitrogen) was supplemented to conditioned medium before use. Medium was changed daily. The hESCs were passaged with 1 mg/ml collagenase IV (Gibco) upon confluency.ChIP-Seq ChIP-SeqThe EZH2 antibody used in the ChIP is from Active motif (Cat: 39901). Between 10e7-10e8 cells were used for the ChIP experiment. Crosslinking of protein and DNA was done at room temperature for 10 minutes with serum free media that contains 1% formaldehyde. The crosslinking reaction is quenched with 0.2M final concentration of glycine for 5 minutes. Cells were washed extensively with 1XPBS, scraped and pelleted. The cells were lysed with 0.1% SDS buffer and collected nuclei were lysed with 1% SDS buffer. Pelleted chromatin was resuspended in the 0.1% SDS buffer (10 mM Tris-HCl [pH 7.5], 150 mM NaCl, 0.1% SDS, 1 mM EDTA) and the DNA was sheared via sonication with the BioRuptor (Diagenode) for 16 cycles of 30 seconds with 1 min intervals at amplitude 40. The chromatin sample was precleared at 20,000rpm for 45mins before the eluents are used for ChIP. ChIP was performed with 5ug of the antibody using Magnetic Protein A beads (Invitrogen). The chromatin was incubated with the immobilized antibody overnight. The ChIP sample was washed 3 times with the IP (0.1%SDS) buffer, once with 1M NaCl in the same buffer, once with LiCl buffer and once with TE-buffer and DNA-protein complexes were eluted with 50 mM Tris-Cl (pH 7.5), 10 mM EDTA, 1% SDS at 69C for 30mins in a orbital shaker at 14000 rpm. The protein-DNA complex was dissociated with 1.5ug/ml Pronase at 42C for 2 hr followed by 67C for 6 hr. ChIP DNA from 2 duplicates were pooled for 10ng of starting material for the library construction. The ChIP enriched DNA was modified with the ChIP-Seq DNA Sample Prep Kit (IP-102-1001, Illumina). Briefly, the DNA end was repaired with exonucleases and an adaptor was ligated to the end, followed by PCR amplification for 15 rounds. The amplified DNA was gel purified and the 200-300bp fragments were selected for subsequent SOLEXA sequencing (Illumina) using the Illumina 1G instrument according to the manufacturers protocol for 36 bp reads.ChIP-Seq

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: male


text: Campylobacter jejuni

characteristic: ArrayExpress-Species

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ARI_1023-sc-2012-06-07T15:27:23Z-1433310

characteristic: Submitter Id

text: Campylobacter jejuni

characteristic: organism

text: Campylobacter jejuni


text: Campylobacter jejuni

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Campylobacter jejuni

text: SC

text: public

text: ARI_1026-sc-2012-06-07T15:27:25Z-1433313

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Campylobacter jejuni

text: SC

text: public

text: ARI_1078-sc-2012-06-07T15:28:02Z-1433361

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Campylobacter jejuni

text: SC

text: public

text: ARI_1020-sc-2012-06-07T15:27:21Z-1433307

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Campylobacter jejuni

text: SC

text: public

text: ARI_1084-sc-2012-06-07T15:28:05Z-1433364

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Campylobacter jejuni

text: SC

text: public

text: ARI_1075-sc-2012-06-07T15:28:00Z-1433358

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Campylobacter jejuni

text: SC

text: public

text: ARI_1072-sc-2012-06-07T15:27:58Z-1433355

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Campylobacter jejuni

text: SC

text: public

text: ARI_1007-sc-2012-06-07T15:27:12Z-1433295

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Campylobacter jejuni

text: SC

text: public

text: ARI_1069-sc-2012-06-07T15:27:55Z-1433352

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Campylobacter jejuni

text: SC

text: public

text: ARI_1066-sc-2012-06-07T15:27:53Z-1433349

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Campylobacter jejuni

text: SC

text: public

text: ARI_1062-sc-2012-06-07T15:27:51Z-1433346

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Campylobacter jejuni

text: SC

text: public

text: ARI_1017-sc-2012-06-07T15:27:19Z-1433304

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Campylobacter jejuni

text: SC

text: public

text: ARI_1014-sc-2012-06-07T15:27:16Z-1433301

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Campylobacter jejuni

text: SC

text: public

text: ARI_1010-sc-2012-06-07T15:27:14Z-1433298

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Campylobacter jejuni

text: SC

text: public

text: ARI_1091-sc-2012-06-07T15:28:09Z-1433370

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Campylobacter jejuni

text: SC

text: public

text: ARI_1088-sc-2012-06-07T15:28:07Z-1433367

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Campylobacter jejuni

text: SC

text: public

text: ARI_1004-sc-2012-06-07T15:27:10Z-1433292

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Campylobacter jejuni

text: SC

text: public

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Campylobacter jejuni

text: SC

text: public

text: ARI_1094-sc-2012-06-07T15:28:12Z-1433373

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Campylobacter jejuni

text: SC

text: public

text: ARI_1058-sc-2012-06-07T15:27:49Z-1433343

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Campylobacter jejuni

text: SC

text: public

text: ARI_1055-sc-2012-06-07T15:27:47Z-1433340

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Campylobacter jejuni

text: SC

text: public

text: ARI_1052-sc-2012-06-07T15:27:44Z-1433337

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Campylobacter jejuni

text: SC

text: public

text: ARI_1001-sc-2012-06-07T15:27:07Z-1433289

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Campylobacter jejuni

text: SC

text: public

text: ARI_1046-sc-2012-06-07T15:27:39Z-1433331

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Campylobacter jejuni

text: SC

text: public

text: ARI_1049-sc-2012-06-07T15:27:41Z-1433334

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Campylobacter jejuni

text: SC

text: public

text: ARI_1104-sc-2012-06-07T15:28:19Z-1433382

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Campylobacter jejuni

text: SC

text: public

text: ARI_1040-sc-2012-06-07T15:27:34Z-1433325

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Campylobacter jejuni

text: SC

text: public

text: ARI_1097-sc-2012-06-07T15:28:14Z-1433376

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Campylobacter jejuni

text: SC

text: public

text: ARI_1100-sc-2012-06-07T15:28:16Z-1433379

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Campylobacter jejuni

text: SC

text: public

text: ARI_1043-sc-2012-06-07T15:27:37Z-1433328

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Campylobacter jejuni

text: SC

text: public

text: ARI_1112-sc-2012-06-07T15:28:23Z-1433388

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Campylobacter jejuni

text: SC

text: public

text: ARI_1108-sc-2012-06-07T15:28:21Z-1433385

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Campylobacter jejuni

text: SC

text: public

text: ARI_1037-sc-2012-06-07T15:27:32Z-1433322

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Campylobacter jejuni

text: SC

text: public

text: ARI_1029-sc-2012-06-07T15:27:27Z-1433316

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Campylobacter jejuni

text: SC

text: public

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Campylobacter jejuni

text: SC

text: public

text: ARI_1033-sc-2012-06-07T15:27:29Z-1433319

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Leishmania donovani donovani

text: SC

text: public

text: MHOM_NP____BPK_190_0_cl3-sc-2011-10-13T14:11:06Z-1289221

text: Leishmania donovani donovani

text: BPK190/0 clone 3

characteristic: sample description

text: Leishmania donovani donovani


text: Leishmania donovani donovani

text: SC

text: public

text: MHOM_NP_03_BPK_279_0_clX-sc-2011-06-17T14:02:39Z-1166045

text: Leishmania donovani donovani

text: BPK279/0 clone X

text: Leishmania donovani donovani


text: SC

text: public

text: MHOM_NP____BPK164_1_cl11-sc-2010-05-07-11126

text: Leishmania donovani donovani

text: BPK164/1 clone 11

text: Leishmania donovani donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_IN____BHU1104_0-sc-2011-12-02T15:01:19Z-1314253

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani donovani

text: SC

text: public

text: MHOM_NP_02_BPK085_0-sc-2011-10-24T10:51:16Z-1290462

text: Leishmania donovani donovani

text: Leishmania donovani donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_IN____BHU281-sc-2011-12-02T15:01:26Z-1314264

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_NP____BPK519-sc-2012-01-10T15:25:38Z-1331170

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_IN____BHU202_0-sc-2011-11-18T12:51:25Z-1306523

text: Leishmania donovani

text: Leishmania donovani


text: SC

text: public

text: MHOM_NP_02_BPK_282_0_cl4-sc-2010-05-07-9086

text: Leishmania donovani donovani

text: BPK282/0 clone 4

text: Leishmania donovani donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_IN____BHU274_0-sc-2011-11-18T12:51:37Z-1306542

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani donovani

text: SC

text: public

text: MHOM_NP_09_BPK_455_0-sc-2011-05-06T16:07:18Z-1133444

text: Leishmania donovani donovani

text: Leishmania donovani donovani


text: Leishmania donovani donovani

text: SC

text: public

text: MHOM_NP____BPK_206_0_cl10-sc-2011-10-13T14:11:07Z-1289222

text: Leishmania donovani donovani

text: BPK206/0 clone 10

text: Leishmania donovani donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_IN____BHU1137_0-sc-2011-12-02T15:01:20Z-1314254

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani donovani

text: SC

text: public

text: MHOM_NP_02_BPK_294_0_cl1-sc-2011-10-24T11:46:10Z-1290464

text: Leishmania donovani donovani

text: BPK294/0 clone1

text: Leishmania donovani donovani


text: Leishmania donovani donovani

text: SC

text: public

text: BPK406A1-sc-2011-04-20T14:52:49Z-1127100

text: Leishmania donovani donovani

text: Leishmania donovani donovani


text: Leishmania donovani donovani

text: SC

text: public

text: BPK526A1-sc-2011-08-04T11:59:27Z-1254547

text: Leishmania donovani donovani

text: Leishmania donovani donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_IN____BHU1146_0-sc-2011-12-02T15:01:20Z-1314255

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani donovani

text: SC

text: public

text: BPK512A1-sc-2011-04-20T14:52:49Z-1127099

text: Leishmania donovani donovani

text: Leishmania donovani donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_NP____BPK594-sc-2012-01-10T15:25:38Z-1331171

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_IN____BHU275_0-sc-2011-11-18T12:51:38Z-1306543

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani donovani

text: SC

text: public

text: MHOM_NP_03_BPK_275_0_cl18-sc-2011-10-13T14:11:07Z-1289223

text: Leishmania donovani donovani

text: BPK275/0 clone 18

text: Leishmania donovani donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_IN____BHU201_0-sc-2011-11-18T12:51:24Z-1306522

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_IN____BHU200_0-sc-2011-11-18T12:51:24Z-1306521

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_NP_2010_BPK509_2-sc-2011-10-24T10:31:19Z-1290460

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani donovani

text: SC

text: public

text: MHOM_NP_04_NEP_021_6_clX-sc-2011-05-06T16:07:20Z-1133446

text: Leishmania donovani donovani

text: NEP021/6 clone X

text: Leishmania donovani donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_NP____BPK649-sc-2012-01-10T15:35:34Z-1331182

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani donovani

text: SC

text: public

text: MHOM_NP_10_BPK519_0_clX-sc-2011-08-04T11:59:26Z-1254545

text: Leishmania donovani donovani

text: BPK519/0 clone X

text: Leishmania donovani donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_IN____BHU254_0-sc-2011-11-18T12:51:35Z-1306539

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani donovani

text: SC

text: public

text: MHOM_NP_03_BPK_206_0_cl10-sc-2011-06-17T14:02:41Z-1166048

text: Leishmania donovani donovani

text: BPK206/0 clone 10

text: Leishmania donovani donovani


text: Leishmania donovani donovani

text: SC

text: public

text: MHOM_NP_03_BPK_173_1_cl9-sc-2011-10-13T14:11:04Z-1289219

text: Leishmania donovani donovani

text: BPK173/1 clone 9

text: Leishmania donovani donovani


text: Leishmania donovani donovani

text: SC

text: public

text: BPK275F6-sc-2011-04-20T14:52:48Z-1127098

text: Leishmania donovani donovani

text: Leishmania donovani donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_IN____BHU1163_4-sc-2011-12-02T15:01:21Z-1314256

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_NP____BPK602-sc-2012-01-10T15:30:31Z-1331172

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_NP____BPK608-sc-2012-01-10T15:30:33Z-1331174

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_IN____BHU188_0-sc-2011-11-18T12:51:23Z-1306520

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani donovani

text: SC

text: public

text: BPK518A1-sc-2011-08-04T11:59:26Z-1254544

text: Leishmania donovani donovani

text: Leishmania donovani donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_NP____BPK650-sc-2012-01-10T15:35:35Z-1331183

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_IN____BHU267_0-sc-2011-11-18T12:51:36Z-1306540

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani donovani

text: SC

text: public

text: MHOM_NP_02_BPK085_0_cl8-sc-2011-10-24T10:51:15Z-1290461

text: Leishmania donovani donovani

text: BPK085/0 clone 8

text: Leishmania donovani donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_IN____BHU213_0-sc-2011-11-18T12:51:27Z-1306526

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani donovani

text: SC

text: public

text: MHOM_NP_02_BPK_178_0_cl3-sc-2011-10-13T14:11:05Z-1289220

text: Leishmania donovani donovani

text: BPK178/0 clone 3

text: Leishmania donovani donovani


text: Leishmania donovani donovani

text: SC

text: public

text: MHOM_NP_____BPK_293_0_clX-sc-2011-08-04T11:59:21Z-1254537

text: Leishmania donovani donovani

text: BPK293/0 clone X

text: Leishmania donovani donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_IN____BHU315_0-sc-2011-11-30T11:46:24Z-1313080

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_IN____BHU268_0-sc-2011-11-18T12:51:37Z-1306541

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_NP____BPK604-sc-2012-01-10T15:30:32Z-1331173

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_IN____BHU298_0-sc-2011-11-30T11:41:16Z-1313078

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani donovani

text: SC

text: public

text: BPK275E5-sc-2011-04-20T14:52:48Z-1127097

text: Leishmania donovani donovani

text: Leishmania donovani donovani


text: Leishmania donovani donovani

text: SC

text: public

text: MHOM_IN____572_cl3-sc-2011-05-27T11:39:10Z-1154717

text: Leishmania donovani donovani

text: BHU-572 clone 3

text: Leishmania donovani donovani


text: Leishmania donovani donovani

text: SC

text: public

text: MHOM_NP_2009_BPK491_0-sc-2011-09-08T16:58:25Z-1277622

text: Leishmania donovani donovani

text: Leishmania donovani donovani


text: Leishmania donovani

text: BPK087/0 clone11_SCMIL30 subclone9

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: MHOM_NP_2002_BPK087_0_clone11_SCMIL30_subclone9_meta1-sc-2011-10-20T12:36:38Z-1290223

text: Leishmania donovani

text: BPK087/0 clone11_SCMIL30 subclone9_meta1

text: Leishmania donovani

text: BPK087/0 clone11_SCMIL30 subclone9

characteristic: strain


text: Leishmania donovani

text: SC

characteristic: INSDC center name

text: public

text: MHOM_IN____BHU242_0-sc-2011-11-18T12:51:34Z-1306537

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani

text: SC

characteristic: INSDC first public

text: public

text: MHOM_IN____BHU931_0-sc-2011-12-02T13:36:39Z-1314243

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani donovani

text: SC

characteristic: INSDC last update

text: public

text: BPK433A1-sc-2011-08-04T11:59:25Z-1254543

text: Leishmania donovani donovani

text: Leishmania donovani donovani


text: Leishmania donovani donovani

text: SC

text: public

text: BPK280A1-sc-2011-08-04T11:59:20Z-1254536

text: Leishmania donovani donovani

text: Leishmania donovani donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_IN____BHU339_0-sc-2011-11-30T11:41:19Z-1313081

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_IN____BHU975_0-sc-2011-12-02T13:36:39Z-1314244

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani donovani

text: SC

text: public

text: MHOM_NP_2009_BPK496_0-sc-2011-09-08T16:58:26Z-1277623

text: Leishmania donovani donovani

text: Leishmania donovani donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_IN____BHU301_0-sc-2011-11-30T11:41:17Z-1313079

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_IN____BHU250_0-sc-2011-11-18T12:51:35Z-1306538

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani donovani

text: SC

text: public

text: MHOM_NP_02_BPK_080_0_cl1-sc-2011-08-04T11:59:19Z-1254534

text: Leishmania donovani donovani

text: BPK080/0 clone 1

text: Leishmania donovani donovani


text: Leishmania donovani donovani

text: SC

text: public

text: BPK413A1-sc-2011-08-04T11:59:24Z-1254542

text: Leishmania donovani donovani

text: Leishmania donovani donovani


text: Leishmania donovani donovani

text: SC

text: public

text: MHOM_NP_02_BPK_087_0_cl11-sc-2011-10-13T14:11:02Z-1289218

text: Leishmania donovani donovani

text: BPK087/0 clone 11

text: Leishmania donovani donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_IN____BHU994_1-sc-2011-12-02T13:36:40Z-1314245

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani donovani

text: SC

text: public

text: MHOM_IN____574_cl4-sc-2011-05-27T11:39:13Z-1154718

text: Leishmania donovani donovani

text: BHU-574 clone 4

text: Leishmania donovani donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_IN____BHU828_0-sc-2011-12-02T13:36:36Z-1314241

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_IN____BHU1153_1-sc-2012-01-10T15:25:37Z-1331169

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani donovani

text: SC

text: public

text: MHOM_NP_____BPK_066_0_clX-sc-2011-08-04T11:59:18Z-1254533

text: Leishmania donovani donovani

text: BPK066/0 clone X

text: Leishmania donovani donovani


text: Leishmania donovani

text: BPK275/0 clone18_SC MIL30_sc9

text: SC

text: public

text: MHOM_NP_2003_BPK275_0_clone_18_SC_MIL30_subclone_9_meta3-sc-2011-10-20T12:36:39Z-1290225

text: Leishmania donovani

text: BPK275/0 clone 18_SC MIL30 subclone 9 meta

text: Leishmania donovani

text: BPK275/0 clone18_SC MIL30_sc9


text: SC

text: public

text: MHOM_NP_02_BPK_081_0_clX-sc-2010-05-14-45785

text: Leishmania donovani donovani

text: BPK081/0 clone X

text: Leishmania donovani donovani


text: Leishmania donovani donovani

text: SC

text: public

text: MHOM_NP_2009_BPK498_0-sc-2011-09-08T16:58:28Z-1277625

text: Leishmania donovani donovani

text: Leishmania donovani donovani


text: Leishmania donovani

text: BPK282/0 clone4

text: SC

text: public

text: MHOM_NP_2003_BPK282_0_clone4_meta2-sc-2011-11-18T12:51:17Z-1306511

text: Leishmania donovani

text: BPK282/0 clone4 meta2

text: Leishmania donovani

text: BPK282/0 clone4


text: Leishmania donovani

text: SC

text: public

text: MHOM_IN____BHU1139-sc-2012-01-10T15:25:36Z-1331168

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani donovani

text: SC

text: public

text: MHOM_NP_04_BPK_380_0_clX-sc-2011-08-04T11:59:24Z-1254541

text: Leishmania donovani donovani

text: BPK380/0 clone X

text: Leishmania donovani donovani


text: Leishmania donovani donovani

text: SC

text: public

text: MHOM_NP_04_NEP_123_6_clX-sc-2011-08-04T11:59:17Z-1254532

text: Leishmania donovani donovani

text: NEP123/6 clone X

text: Leishmania donovani donovani


text: Leishmania donovani

text: BPK275/0 clone18

text: SC

text: public

text: MHOM_NP_2003_BPK275_0_clone_18_meta2-sc-2011-10-20T12:36:38Z-1290224

text: Leishmania donovani

text: BPK275/0 clone 18 meta2

text: Leishmania donovani

text: BPK275/0 clone18


text: Leishmania donovani donovani

text: SC

text: public

text: MHOM_NP_04_BPK_345_0_clX-sc-2011-08-04T11:59:22Z-1254539

text: Leishmania donovani donovani

text: BPK345/0 clone X

text: Leishmania donovani donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_IN____BHU210_0-sc-2011-11-18T12:51:26Z-1306525

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_IN____BHU889_0-sc-2011-12-02T13:36:37Z-1314242

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_NP_2009_BPK471_7-sc-2011-10-24T10:31:12Z-1290451

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_IN____BHU241_0-sc-2011-11-18T12:51:33Z-1306536

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani donovani

text: SC

text: public

text: MHOM_NP_2009_BPK497_0-sc-2011-09-08T16:58:27Z-1277624

text: Leishmania donovani donovani

text: Leishmania donovani donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_NP_2009_BPK475_9-sc-2011-10-24T10:31:13Z-1290452

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_IN____BHU205_0-sc-2011-11-18T12:51:26Z-1306524

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani donovani

text: SC

text: public

text: MHOM_NP_04_BPK_375_0_clX-sc-2011-08-04T11:59:23Z-1254540

text: Leishmania donovani donovani

text: BPK375/0 clone X

text: Leishmania donovani donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_IN____BHU345-sc-2012-01-10T15:25:35Z-1331167

text: Leishmania donovani

text: Leishmania donovani


text: SC

text: public

text: MHOM_NP_02_BPK_029_0_clX-sc-2010-05-14-45783

text: Leishmania donovani donovani

text: BPK029/0 clone X

text: Leishmania donovani donovani


text: Leishmania donovani

text: SC

text: public

text: MHOM_IN____BHU233_0-sc-2011-11-18T12:51:31Z-1306532

text: Leishmania donovani

text: Leishmania donovani


text: Leishmania donovani

text: BPK087/0 clone11

text: SC

text: public

text: MHOM_NP_2002_BPK087_0_clone11_meta1-sc-2011-10-20T12:36:37Z-1290222

text: Leishmania donovani

text: BPK087/0 clone11 meta1

text: Leishmania donovani

text: BPK087/0 clone11


text: Leishmania donovani

text: SC

text: public

text: MHOM_NP_2009_BPK486_7-sc-2011-10-24T10:31:15Z-1290453

text: Leishmania donovani

text: Leishmania donovani