text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: zebrafish

characteristic: common name

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for nod2, allele sa18880,ZMP phenotype 71 clutch 1. A 8 base indexing sequence (TAGCTTGT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph71

text: Danio rerio

text: mixed


status: PUBLIC

text: Larval - Day 5 ZFS:0000037

tag: attribute

characteristic: ArrayExpress-DevelopmentalStage

text: Whole Embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

characteristic: ArrayExpress-Species

text: mixed

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: zebrafish

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for nod2, allele sa18880,ZMP phenotype 71 clutch 1. A 8 base indexing sequence (GGCTACAG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph71

characteristic: sample description

text: Danio rerio

text: mixed

characteristic: strain


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: zebrafish

characteristic: common name

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for nod2, allele sa18880,ZMP phenotype 71 clutch 1. A 8 base indexing sequence (CTTGTACT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph71

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

characteristic: ArrayExpress-DevelopmentalStage

text: Whole Embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: mixed

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped heterozygous embryo for nod2, allele sa18880,ZMP phenotype 71 clutch 1. A 8 base indexing sequence (TGGTTGTT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph71

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

characteristic: ArrayExpress-Species

text: mixed

characteristic: ENA-CHECKLIST

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped heterozygous embryo for nod2, allele sa18880,ZMP phenotype 71 clutch 1. A 8 base indexing sequence (TCTCGGTT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph71

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped heterozygous embryo for nod2, allele sa18880,ZMP phenotype 71 clutch 1. A 8 base indexing sequence (TAAGCGTT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph71

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped heterozygous embryo for nod2, allele sa18880,ZMP phenotype 71 clutch 1. A 8 base indexing sequence (TCCGTCTT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph71

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped heterozygous embryo for nod2, allele sa18880,ZMP phenotype 71 clutch 1. A 8 base indexing sequence (TGTACCTT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph71

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped wild type embryo for nod2, allele sa18880,ZMP phenotype 71 clutch 1. A 8 base indexing sequence (TCTGCTGT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph71

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: Submitter Id

text: zebrafish

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single genotyped wild type embryo for nod2, allele sa18880,ZMP phenotype 71 clutch 1. A 8 base indexing sequence (TTGGAGGT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph71

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped wild type embryo for nod2, allele sa18880,ZMP phenotype 71 clutch 1. A 8 base indexing sequence (TCGAGCGT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph71

characteristic: sample description

text: Danio rerio

text: mixed

characteristic: strain


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: zebrafish

characteristic: common name

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped wild type embryo for nod2, allele sa18880,ZMP phenotype 71 clutch 1. A 8 base indexing sequence (TGATACGT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph71

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

characteristic: ArrayExpress-DevelopmentalStage

text: Whole Embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: mixed

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped wild type embryo for nod2, allele sa18880,ZMP phenotype 71 clutch 1. A 8 base indexing sequence (TGCATAGT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph71

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

characteristic: ArrayExpress-Species

text: mixed

characteristic: ENA-CHECKLIST

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped wild type embryo for nod2, allele sa18880,ZMP phenotype 71 clutch 1. A 8 base indexing sequence (TTGACTCT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph71

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for drosha, allele sa191,ZMP phenotype 63 clutch 1. A 8 base indexing sequence (TGCGATCT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph63

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for drosha, allele sa191,ZMP phenotype 63 clutch 1. A 8 base indexing sequence (TTCCTGCT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph63

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for drosha, allele sa191,ZMP phenotype 63 clutch 1. A 8 base indexing sequence (TAGTGACT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph63

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for drosha, allele sa191,ZMP phenotype 63 clutch 1. A 8 base indexing sequence (TACAGGAT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph63

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: Submitter Id

text: zebrafish

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for drosha, allele sa191,ZMP phenotype 63 clutch 1. A 8 base indexing sequence (TCCTCAAT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph63

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for drosha, allele sa191,ZMP phenotype 63 clutch 1. A 8 base indexing sequence (TGTGGTTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph63

characteristic: sample description

text: Danio rerio

text: mixed

characteristic: strain


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: zebrafish

characteristic: common name

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for drosha, allele sa191,ZMP phenotype 63 clutch 1. A 8 base indexing sequence (TAGTCTTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph63

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

characteristic: ArrayExpress-DevelopmentalStage

text: Whole Embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: mixed

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for drosha, allele sa191,ZMP phenotype 63 clutch 1. A 8 base indexing sequence (TTCCATTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph63

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

characteristic: ArrayExpress-Species

text: mixed

characteristic: ENA-CHECKLIST

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for drosha, allele sa191,ZMP phenotype 63 clutch 1. A 8 base indexing sequence (TCGAAGTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph63

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for drosha, allele sa191,ZMP phenotype 63 clutch 1. A 8 base indexing sequence (TAACGCTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph63

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for drosha, allele sa191,ZMP phenotype 63 clutch 1. A 8 base indexing sequence (TTGGTATG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph63

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for drosha, allele sa191,ZMP phenotype 63 clutch 1. A 8 base indexing sequence (TGAACTGG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph63

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped wild type embryo for drosha, allele sa191,ZMP phenotype 63 clutch 1. A 8 base indexing sequence (TACTTCGG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph63

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: Submitter Id

text: zebrafish

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single genotyped wild type embryo for drosha, allele sa191,ZMP phenotype 63 clutch 1. A 8 base indexing sequence (TCTCACGG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph63

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped wild type embryo for drosha, allele sa191,ZMP phenotype 63 clutch 1. A 8 base indexing sequence (TCAGGAGG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph63

characteristic: sample description

text: Danio rerio

text: mixed

characteristic: strain


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: zebrafish

characteristic: common name

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped wild type embryo for drosha, allele sa191,ZMP phenotype 63 clutch 1. A 8 base indexing sequence (TAAGTTCG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph63

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

characteristic: ArrayExpress-DevelopmentalStage

text: Whole Embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: mixed

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped wild type embryo for drosha, allele sa191,ZMP phenotype 63 clutch 1. A 8 base indexing sequence (TCCAGTCG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph63

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

characteristic: ArrayExpress-Species

text: mixed

characteristic: ENA-CHECKLIST

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped wild type embryo for drosha, allele sa191,ZMP phenotype 63 clutch 1. A 8 base indexing sequence (TGTATGCG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph63

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped wild type embryo for drosha, allele sa191,ZMP phenotype 63 clutch 1. A 8 base indexing sequence (TCATTGAG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph63

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped wild type embryo for drosha, allele sa191,ZMP phenotype 63 clutch 1. A 8 base indexing sequence (TGGCTCAG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph63

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped wild type embryo for drosha, allele sa191,ZMP phenotype 63 clutch 1. A 8 base indexing sequence (TATGCCAG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph63

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped wild type embryo for drosha, allele sa191,ZMP phenotype 63 clutch 1. A 8 base indexing sequence (TCAGATTC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph63

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: Submitter Id

text: zebrafish

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single genotyped wild type embryo for drosha, allele sa191,ZMP phenotype 63 clutch 1. A 8 base indexing sequence (TACTAGTC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph63

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped wild type embryo for drosha, allele sa191,ZMP phenotype 63 clutch 1. A 8 base indexing sequence (TTCAGCTC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph63

characteristic: sample description

text: Danio rerio

text: mixed

characteristic: strain


text: Hatching:Pec-fin - ZFS:0000034

text: Whole Embryo

text: Danio rerio

text: mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: ZMP_phenotype_78_1_phenotypic_1-sc-2069963

text: zebrafish

characteristic: common name

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically abnormal embryo from ZMP phenotype 78 clutch 1. A 8 base indexing sequence (TGCGATCT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph78

text: Danio rerio

text: mixed


text: Hatching:Pec-fin - ZFS:0000034

characteristic: ArrayExpress-DevelopmentalStage

text: Whole Embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: mixed

text: SC

text: public

text: ZMP_phenotype_78_1_phenotypic_2-sc-2069964

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically abnormal embryo from ZMP phenotype 78 clutch 1. A 8 base indexing sequence (TTCCTGCT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph78

text: Danio rerio

text: mixed


text: Hatching:Pec-fin - ZFS:0000034

text: Whole Embryo

text: Danio rerio

characteristic: ArrayExpress-Species

text: mixed

characteristic: ENA-CHECKLIST

text: SC

text: public

text: ZMP_phenotype_78_1_phenotypic_3-sc-2069965

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically abnormal embryo from ZMP phenotype 78 clutch 1. A 8 base indexing sequence (TAGTGACT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph78

text: Danio rerio

text: mixed


text: Hatching:Pec-fin - ZFS:0000034

text: Whole Embryo

text: Danio rerio

text: mixed

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: ZMP_phenotype_78_1_phenotypic_4-sc-2069966

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically abnormal embryo from ZMP phenotype 78 clutch 1. A 8 base indexing sequence (TACAGGAT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph78

text: Danio rerio

text: mixed


text: Hatching:Pec-fin - ZFS:0000034

text: Whole Embryo

text: Danio rerio

text: mixed

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: ZMP_phenotype_78_1_phenotypic_5-sc-2069967

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically abnormal embryo from ZMP phenotype 78 clutch 1. A 8 base indexing sequence (TCCTCAAT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph78

text: Danio rerio

text: mixed


text: Hatching:Pec-fin - ZFS:0000034

text: Whole Embryo

text: Danio rerio

text: mixed

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ZMP_phenotype_78_1_phenotypic_6-sc-2069968

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically abnormal embryo from ZMP phenotype 78 clutch 1. A 8 base indexing sequence (TGTGGTTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph78

text: Danio rerio

text: mixed


text: Hatching:Pec-fin - ZFS:0000034

text: Whole Embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ZMP_phenotype_78_1_phenotypic_7-sc-2069969

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically abnormal embryo from ZMP phenotype 78 clutch 1. A 8 base indexing sequence (TAGTCTTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph78

text: Danio rerio

text: mixed


text: Hatching:Pec-fin - ZFS:0000034

text: Whole Embryo

text: Danio rerio

text: mixed

text: SC

text: public

text: ZMP_phenotype_78_1_phenotypic_8-sc-2069970

characteristic: Submitter Id

text: zebrafish

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single phenotypically abnormal embryo from ZMP phenotype 78 clutch 1. A 8 base indexing sequence (TTCCATTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph78

text: Danio rerio

text: mixed


text: Hatching:Pec-fin - ZFS:0000034

text: Whole Embryo

text: Danio rerio

text: mixed

text: SC

text: public

text: ZMP_phenotype_78_1_phenotypic_9-sc-2069971

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically abnormal embryo from ZMP phenotype 78 clutch 1. A 8 base indexing sequence (TCGAAGTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph78

characteristic: sample description

text: Danio rerio

text: mixed

characteristic: strain


text: Hatching:Pec-fin - ZFS:0000034

text: Whole Embryo

text: Danio rerio

text: mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: ZMP_phenotype_78_1_phenotypic_10-sc-2069972

text: zebrafish

characteristic: common name

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically abnormal embryo from ZMP phenotype 78 clutch 1. A 8 base indexing sequence (TAACGCTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph78

text: Danio rerio

text: mixed


text: Hatching:Pec-fin - ZFS:0000034

characteristic: ArrayExpress-DevelopmentalStage

text: Whole Embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: mixed

text: SC

text: public

text: ZMP_phenotype_78_1_phenotypic_11-sc-2069973

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically abnormal embryo from ZMP phenotype 78 clutch 1. A 8 base indexing sequence (TTGGTATG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph78

text: Danio rerio

text: mixed


text: Hatching:Pec-fin - ZFS:0000034

text: Whole Embryo

text: Danio rerio

characteristic: ArrayExpress-Species

text: mixed

characteristic: ENA-CHECKLIST

text: SC

text: public

text: ZMP_phenotype_78_1_phenotypic_12-sc-2069974

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically abnormal embryo from ZMP phenotype 78 clutch 1. A 8 base indexing sequence (TGAACTGG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph78

text: Danio rerio

text: mixed


text: Hatching:Pec-fin - ZFS:0000034

text: Whole Embryo

text: Danio rerio

text: mixed

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: ZMP_phenotype_78_1_non_phenotypic_1-sc-2069975

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically normal embryo from ZMP phenotype 78 clutch 1. A 8 base indexing sequence (TACTTCGG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph78

text: Danio rerio

text: mixed


text: Hatching:Pec-fin - ZFS:0000034

text: Whole Embryo

text: Danio rerio

text: mixed

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: ZMP_phenotype_78_1_non_phenotypic_2-sc-2069976

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically normal embryo from ZMP phenotype 78 clutch 1. A 8 base indexing sequence (TCTCACGG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph78

text: Danio rerio

text: mixed


text: Hatching:Pec-fin - ZFS:0000034

text: Whole Embryo

text: Danio rerio

text: mixed

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ZMP_phenotype_78_1_non_phenotypic_3-sc-2069977

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically normal embryo from ZMP phenotype 78 clutch 1. A 8 base indexing sequence (TCAGGAGG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph78

text: Danio rerio

text: mixed


text: Hatching:Pec-fin - ZFS:0000034

text: Whole Embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ZMP_phenotype_78_1_non_phenotypic_4-sc-2069978

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically normal embryo from ZMP phenotype 78 clutch 1. A 8 base indexing sequence (TAAGTTCG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph78

text: Danio rerio

text: mixed


text: Hatching:Pec-fin - ZFS:0000034

text: Whole Embryo

text: Danio rerio

text: mixed

text: SC

text: public

text: ZMP_phenotype_78_1_non_phenotypic_5-sc-2069979

characteristic: Submitter Id

text: zebrafish

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single phenotypically normal embryo from ZMP phenotype 78 clutch 1. A 8 base indexing sequence (TGTATGCG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph78

text: Danio rerio

text: mixed


text: Hatching:Pec-fin - ZFS:0000034

text: Whole Embryo

text: Danio rerio

text: mixed

text: SC

text: public

text: ZMP_phenotype_78_1_non_phenotypic_6-sc-2069980

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically normal embryo from ZMP phenotype 78 clutch 1. A 8 base indexing sequence (TCATTGAG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph78

characteristic: sample description

text: Danio rerio

text: mixed

characteristic: strain


text: Hatching:Pec-fin - ZFS:0000034

text: Whole Embryo

text: Danio rerio

text: mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: ZMP_phenotype_78_1_non_phenotypic_7-sc-2069981

text: zebrafish

characteristic: common name

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically normal embryo from ZMP phenotype 78 clutch 1. A 8 base indexing sequence (TGGCTCAG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph78

text: Danio rerio

text: mixed


text: Hatching:Pec-fin - ZFS:0000034

characteristic: ArrayExpress-DevelopmentalStage

text: Whole Embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: mixed

text: SC

text: public

text: ZMP_phenotype_78_1_non_phenotypic_8-sc-2069982

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically normal embryo from ZMP phenotype 78 clutch 1. A 8 base indexing sequence (TCAGATTC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph78

text: Danio rerio

text: mixed


text: Hatching:Pec-fin - ZFS:0000034

text: Whole Embryo

text: Danio rerio

characteristic: ArrayExpress-Species

text: mixed

characteristic: ENA-CHECKLIST

text: SC

text: public

text: ZMP_phenotype_78_1_non_phenotypic_9-sc-2069983

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically normal embryo from ZMP phenotype 78 clutch 1. A 8 base indexing sequence (TACTAGTC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph78

text: Danio rerio

text: mixed


text: Hatching:Pec-fin - ZFS:0000034

text: Whole Embryo

text: Danio rerio

text: mixed

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: ZMP_phenotype_78_1_non_phenotypic_10-sc-2069984

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single phenotypically normal embryo from ZMP phenotype 78 clutch 1. A 8 base indexing sequence (TTCAGCTC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph78

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for tert, allele sa6541,ZMP phenotype 93 clutch 1. A 8 base indexing sequence (TGTCTATC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph93

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for tert, allele sa6541,ZMP phenotype 93 clutch 1. A 8 base indexing sequence (TATGTGGC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph93

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for tert, allele sa6541,ZMP phenotype 93 clutch 1. A 8 base indexing sequence (TTACTCGC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph93

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: Submitter Id

text: zebrafish

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for tert, allele sa6541,ZMP phenotype 93 clutch 1. A 8 base indexing sequence (TCGTTAGC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph93

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for tert, allele sa6541,ZMP phenotype 93 clutch 1. A 8 base indexing sequence (TACCGAGC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph93

characteristic: sample description

text: Danio rerio

text: mixed

characteristic: strain


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: zebrafish

characteristic: common name

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for tert, allele sa6541,ZMP phenotype 93 clutch 1. A 8 base indexing sequence (TGTTCTCC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph93

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

characteristic: ArrayExpress-DevelopmentalStage

text: Whole Embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: mixed

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for tert, allele sa6541,ZMP phenotype 93 clutch 1. A 8 base indexing sequence (TTCGCACC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph93

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

characteristic: ArrayExpress-Species

text: mixed

characteristic: ENA-CHECKLIST

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for tert, allele sa6541,ZMP phenotype 93 clutch 1. A 8 base indexing sequence (TTGCGTAC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph93

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for tert, allele sa6541,ZMP phenotype 93 clutch 1. A 8 base indexing sequence (TCTACGAC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph93

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for tert, allele sa6541,ZMP phenotype 93 clutch 1. A 8 base indexing sequence (TGACAGAC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph93

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for tert, allele sa6541,ZMP phenotype 93 clutch 1. A 8 base indexing sequence (TAGAACAC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph93

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped homozygous mutant embryo for tert, allele sa6541,ZMP phenotype 93 clutch 1. A 8 base indexing sequence (TCATCCTA) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph93

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: Submitter Id

text: zebrafish

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single genotyped wild type embryo for tert, allele sa6541,ZMP phenotype 93 clutch 1. A 8 base indexing sequence (TGCTGATA) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph93

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped wild type embryo for tert, allele sa6541,ZMP phenotype 93 clutch 1. A 8 base indexing sequence (TAGACGGA) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph93

characteristic: sample description

text: Danio rerio

text: mixed

characteristic: strain


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: zebrafish

characteristic: common name

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped wild type embryo for tert, allele sa6541,ZMP phenotype 93 clutch 1. A 8 base indexing sequence (TGTGAAGA) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph93

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

characteristic: ArrayExpress-DevelopmentalStage

text: Whole Embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: mixed

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped wild type embryo for tert, allele sa6541,ZMP phenotype 93 clutch 1. A 8 base indexing sequence (TCTCTTCA) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph93

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

characteristic: ArrayExpress-Species

text: mixed

characteristic: ENA-CHECKLIST

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped wild type embryo for tert, allele sa6541,ZMP phenotype 93 clutch 1. A 8 base indexing sequence (TTGTTCCA) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph93

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped wild type embryo for tert, allele sa6541,ZMP phenotype 93 clutch 1. A 8 base indexing sequence (TGAAGCCA) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph93

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped wild type embryo for tert, allele sa6541,ZMP phenotype 93 clutch 1. A 8 base indexing sequence (TACCACCA) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph93

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped wild type embryo for tert, allele sa6541,ZMP phenotype 93 clutch 1. A 8 base indexing sequence (TGCGTGAA) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph93

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped wild type embryo for tert, allele sa6541,ZMP phenotype 93 clutch 1. A 8 base indexing sequence (GGTGAGTT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph93

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: Submitter Id

text: zebrafish

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single genotyped wild type embryo for tert, allele sa6541,ZMP phenotype 93 clutch 1. A 8 base indexing sequence (GATCTCTT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph93

text: Danio rerio

text: mixed


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped wild type embryo for tert, allele sa6541,ZMP phenotype 93 clutch 1. A 8 base indexing sequence (GTGTCCTT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph93

characteristic: sample description

text: Danio rerio

text: mixed

characteristic: strain


text: Larval - Day 5 ZFS:0000037

text: Whole Embryo

text: Danio rerio

text: mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: zebrafish

characteristic: common name

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped wild type embryo for tert, allele sa6541,ZMP phenotype 93 clutch 1. A 8 base indexing sequence (GACGGATT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi-bin/Projects/D_rerio/zmp/search.pl?q=zmp_ph93

text: Danio rerio

text: mixed


text: Mouse

text: SC

text: public

text: house mouse

text: Mus musculus

text: mRNAseq Nextera library made from RNA extracted from haemopoetic stem and progenitor cells

text: Mus musculus


text: Danio rerio

text: SC

text: public

text: zebrafish

text: Danio rerio

text: Danio rerio


text: public

tag: Namespace:College of Forensic Medicine, Xian Jiaotong University Health Science Center

text: ArrayExpress

characteristic: broker name

text: house mouse

text: Protocols: Mice were given once daily injections of saline for two consecutive days (day 1-2), after which they were divided into two groups randomly. Two groups of mice were then given once daily injections of methamphetamine (METH, 2mg/kg) or saline for five consecutive days (day 3-7) followed by two injection-free days (day 8-9). On day 10, mice were given a challenge injection of either 2 mg/kg dose of METH or saline. Horizontal locomotor activity was performed on all drug treatment days for 60 minutes before and after the injections. For all experiments, mice were sacrificed 24 h after the last injection. After mice were sacrificed, nucleus accumbens (NAc) were harvested and NAc lysate from eight mice of each group were pooled as one sample for total RNA isolation, following to the manufacturers instructions of TRIzol (Invitrogen, USA). The RNA quality was evaluated by Agilent 2100 BioAnalyzer (Agilent Technologies, USA), and all samples exhibited an RIN > 8. Total RNA (5ug) of each sample was fragmented into ~200 base pair (bp) using a Covaris-S2 system after removed rRNA without preselecting mRNA. The first cDNA strand was synthesized using random hexamers and second strand cDNA was synthesized where dUTP was used instead of dTTP by DNA polymerase I. Then the double stranded cDNA were end-repaired after purified by QiaQuick PCR kit, and adapters were ligated. Subsequently, the uridine-containing strand was destructed by Uracil-N-Glycosylase, which enabled the identification of transcript orientation. After that, for acquiring the sequencing library products, the single stranded adapted cDNA fragments of 200 bp were recovered and purified with agarose gel electrophoresis and then enriched by PCR for 12 cycles.

characteristic: description

text: Mus musculus

text: Mus musculus

text: nucleus accumbens

characteristic: organism part

text: Mus musculus

text: Saline

characteristic: title

type: has member


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: College of Forensic Medicine, Xian Jiaotong University Health Science Center

text: public

text: ArrayExpress

text: house mouse

text: Mus musculus

text: Mus musculus

text: nucleus accumbens

text: Mus musculus

text: METH


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:EMBL-EBI, Wellcome Trust Genome Campus, Cambridge

text: ArrayExpress

text: S

characteristic: cell cycle stage

characteristic: cell line

text: house mouse

text: Protocols: mESC were grown in standard 2i media. The media composition was N2B27 basal media (NDiff 227, StemCells), 100 U/ml recombinant human leukemia inhibitory factor (Millipore), 1M PD0325901 (Stemgent), 3M CHIR99021 (Stemgent). For sorting of cell cycle fractions (G1, S and G2M), cells were trypisinized and stained with Hoechst 33342 (5_M) for 30min at 37C. Cells were sorted based on Hoechst staining for G1, S and G2M stages of cell cycle. For each cell cycle fraction, 3000 cells were loaded onto a 10-17 micron Fluidigm C1 Single-Cell Auto Prep IFC and cell capture was performed as per manufacturers protocol. Single cell capture, lysis, Reverse transcription and cDNA amplification are performed using the SMARTer cDNA synthesis kit (Clonetech) and Advantage2PCR kit (Clonetech) with 1:100 ratio of spike in (Ambion), within the IFC inside the C1-Autoprep system as per manufacturers protocol. Harvested cDNA from single cells after C1-Autoprep system run were used to make single cell libraries using Nextera XT DNA sample preparation kit (Illumina) utilising 96 dual barcoded indices. Library poolup was performed using AMPure XP beads (Agencourt Biosciences) and single cell libraries were sent for paired end sequencing at the Wellcome Trust Sequencing facility

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: fresh specimen

characteristic: specimen with known storage state

text: mESC


text: EMBL-EBI, Wellcome Trust Genome Campus, Cambridge

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: house mouse

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Mus musculus

text: fresh specimen

text: mESC


text: public

text: ArrayExpress

characteristic: broker name

text: S

text: house mouse

characteristic: common name

characteristic: description

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: fresh specimen

text: mESC

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: IOA

text: public

text: Nile tilapia

text: Oreochromis niloticus

text: Oreochromis niloticus

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IOA

characteristic: INSDC center name

text: public

text: Mozambique tilapia

text: Oreochromis mossambicus

text: Oreochromis mossambicus


text: IOA

characteristic: INSDC first public

text: public

text: redbelly tilapia

text: Coptodon zillii

text: Coptodon zillii


text: IOA

text: public

text: Rufigi tilapia

text: Oreochromis urolepis

text: Oreochromis urolepis


text: IOA

text: public

text: mango tilapia

text: Sarotherodon galilaeus

text: Sarotherodon galilaeus


E-MTAB-2816:E8.5 Sox17^GFP/+ embryos 2

text: Vanderbilt University

text: public

text: E-MTAB-2816:E8.5 Sox17^GFP/+ embryos 2

tag: Namespace:Vanderbilt University

text: embryonic day 8.5

characteristic: age measurement datum

text: ArrayExpress

text: house mouse

text: pool of 9 E8.5 (8~9 somites) Sox17^GFP/+ embryos Protocols: Embryos were isolated from mice on specified day of development; the presence of vaginal plug at noon was considered as E0.5. Embryos were genotyped by fluorescence microscopy. The embryos were dissected and the dissection event was confirmed by checking the marker protein (e.g., GFP) fluorescence. Tissues were dissociated with Accumax (Sigma) at 37 C. Flow Cytometry experiments were performed in the VMC Flow Cytometry Shared Resource on a BD Aria I or II.

text: embryo stage

characteristic: life cycle stage

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: STOCK Sox17tm2(EGFP/cre)Mgn/Mmnc mouse strain

text: E8.5 Sox17^GFP/+ embryos 2


E-MTAB-2816:E9.5 Pdx1^CFP/+  embryos 3

text: Vanderbilt University

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-2816:E9.5 Pdx1^CFP/+ embryos 3

text: embryonic day 9.5

text: ArrayExpress

text: house mouse

text: pool of 6 E9.5 Pdx1^CFP/+ embryos (2 litters) Protocols: Embryos were isolated from mice on specified day of development; the presence of vaginal plug at noon was considered as E0.5. Embryos were genotyped by fluorescence microscopy. The embryos were dissected and the dissection event was confirmed by checking the marker protein (e.g., GFP) fluorescence. Tissues were dissociated with Accumax (Sigma) at 37 C. Flow Cytometry experiments were performed in the VMC Flow Cytometry Shared Resource on a BD Aria I or II.

text: embryo stage

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: B6.129S6-Pdx1tm2Mgn/Mmnc mouse strain

text: E9.5 Pdx1^CFP/+ embryos 3


E-MTAB-2816:E9.5 Pdx1^CFP/+  embryos 2

text: Vanderbilt University

text: public

characteristic: SRA accession

text: E-MTAB-2816:E9.5 Pdx1^CFP/+ embryos 2

characteristic: Submitter Id

text: embryonic day 9.5

text: ArrayExpress

text: house mouse

text: pool 4 E9.5 Pdx1^CFP/+ embryos (2 litters) Protocols: Embryos were isolated from mice on specified day of development; the presence of vaginal plug at noon was considered as E0.5. Embryos were genotyped by fluorescence microscopy. The embryos were dissected and the dissection event was confirmed by checking the marker protein (e.g., GFP) fluorescence. Tissues were dissociated with Accumax (Sigma) at 37 C. Flow Cytometry experiments were performed in the VMC Flow Cytometry Shared Resource on a BD Aria I or II.

text: embryo stage

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: B6.129S6-Pdx1tm2Mgn/Mmnc mouse strain

text: E9.5 Pdx1^CFP/+ embryos 2


E-MTAB-2816:E15.5 Ngn3^GFP/+ embryos 1

text: Vanderbilt University

text: public

text: E-MTAB-2816:E15.5 Ngn3^GFP/+ embryos 1

text: embryonic day 15.5

text: ArrayExpress

characteristic: broker name

text: house mouse

text: pool of 7 E15.5 Ngn3^GFP/+ embryos (2 litters) Protocols: Embryos were isolated from mice; the presence of vaginal plug at noon was considered as E0.5. Embryos obtained from heterozygous interbreeding were genotyped by fluorescence microscopy or were genotyped using PCR. Pancreatic tissues were dissociated with trypsin at 37 C for 10-60 minutes. Adult pancreas were perfused, islets handpicked, and then subject to sorting. Flow Cytometry experiments were performed in the VMC Flow Cytometry Shared Resource on a BD Aria I or II. Littermates without EGFP were used as controls to set gating.

text: embryo stage

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Mus musculus

text: B6.129S-Neurog3tm1(EGFP)Khk/Mmcd mouse strain

text: E15.5 Ngn3^GFP/+ embryos 1


E-MTAB-2816:E15.5 Insm1^GFP/+ embryos 1

text: Vanderbilt University

text: public

text: E-MTAB-2816:E15.5 Insm1^GFP/+ embryos 1

text: embryonic day 15.5

text: ArrayExpress

text: house mouse

characteristic: common name

text: pool of 2 E15.5 Insm1^GFP/+ embryos Protocols: Embryos were isolated from mice on specified day of development; the presence of vaginal plug at noon was considered as E0.5. Heterozygous embryos were identified using a fluorescent microscope, and embryos obtained from heterozygous interbreeding were genotyped using custom-designed TaqMan primers and probes. Tissues were dissociated with Accumax (Sigma) at 37 C. Flow Cytometry experiments were performed in the VMC Flow Cytometry Shared Resource on a BD Aria I or II.

characteristic: description

text: embryo stage

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Insm1tm2Mgn mouse strain

text: E15.5 Insm1^GFP/+ embryos 1


E-MTAB-2816:E8.0 Sox17^GFP/+ embryos 3

characteristic: ENA-CHECKLIST

text: Vanderbilt University

text: public

text: E-MTAB-2816:E8.0 Sox17^GFP/+ embryos 3

text: embryonic day 8

text: ArrayExpress

text: house mouse

text: pool of 13 E8.0 (5~7 somites) Sox17^GFP/+ embryos Protocols: Embryos were isolated from mice on specified day of development; the presence of vaginal plug at noon was considered as E0.5. Embryos were genotyped by fluorescence microscopy. The embryos were dissected and the dissection event was confirmed by checking the marker protein (e.g., GFP) fluorescence. Tissues were dissociated with Accumax (Sigma) at 37 C. Flow Cytometry experiments were performed in the VMC Flow Cytometry Shared Resource on a BD Aria I or II.

text: embryo stage

text: Mus musculus

text: Mus musculus

text: Mus musculus

characteristic: strain

text: E8.0 Sox17^GFP/+ embryos 3


E-MTAB-2816:E16.5 MIP-GFP embryos 1

characteristic: ENA-FIRST-PUBLIC

text: Vanderbilt University

text: public

text: E-MTAB-2816:E16.5 MIP-GFP embryos 1

text: embryonic day 16.5

text: ArrayExpress

text: house mouse

text: pool of 4 E16.5 MIP-GFP embryos Protocols: Embryos were isolated from mice; the presence of vaginal plug at noon was considered as E0.5. Embryos obtained from heterozygous interbreeding were genotyped by fluorescence microscopy or were genotyped using PCR. Pancreatic tissues were dissociated with trypsin at 37 C for 10-60 minutes. Adult pancreas were perfused, islets handpicked, and then subject to sorting. Flow Cytometry experiments were performed in the VMC Flow Cytometry Shared Resource on a BD Aria I or II. Littermates without EGFP were used as controls to set gating.

text: embryo stage

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: STOCK Tg(Ins1-EGFP/GH1)14Hara/Mmmh mouse strain

text: E16.5 MIP-GFP embryos 1

characteristic: title


E-MTAB-2816:E8.0 Sox17^GFP/+ embryos 1

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Vanderbilt University

text: public

text: E-MTAB-2816:E8.0 Sox17^GFP/+ embryos 1

text: embryonic day 8

text: ArrayExpress

text: house mouse

text: pool of 6 E8.0 (5~7 somites) Sox17^GFP/+ embryos Protocols: Embryos were isolated from mice on specified day of development; the presence of vaginal plug at noon was considered as E0.5. Embryos were genotyped by fluorescence microscopy. The embryos were dissected and the dissection event was confirmed by checking the marker protein (e.g., GFP) fluorescence. Tissues were dissociated with Accumax (Sigma) at 37 C. Flow Cytometry experiments were performed in the VMC Flow Cytometry Shared Resource on a BD Aria I or II.

text: embryo stage

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: E8.0 Sox17^GFP/+ embryos 1


name: E-MTAB-2816:E15.5 Insm1^GFP/GFP embryos 2

text: Vanderbilt University

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: embryonic day 15.5

text: ArrayExpress

text: house mouse

text: pool 1 of 5 E15.5 Insm1^GFP/GFP embryos Protocols: Embryos were isolated from mice on specified day of development; the presence of vaginal plug at noon was considered as E0.5. Heterozygous embryos were identified using a fluorescent microscope, and embryos obtained from heterozygous interbreeding were genotyped using custom-designed TaqMan primers and probes. Tissues were dissociated with Accumax (Sigma) at 37 C. Flow Cytometry experiments were performed in the VMC Flow Cytometry Shared Resource on a BD Aria I or II.

text: embryo stage

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Insm1tm2Mgn mouse strain

text: E15.5 Insm1^GFP/GFP embryos 2


E-MTAB-2816:E8.0 Sox17^GFP/+ embryos 2

text: Vanderbilt University

text: public

text: E-MTAB-2816:E8.0 Sox17^GFP/+ embryos 2

text: embryonic day 8

characteristic: age measurement datum

text: ArrayExpress

text: house mouse

text: pool of 11 E8.0 (6~7 somites) Sox17^GFP/+ embryos Protocols: Embryos were isolated from mice on specified day of development; the presence of vaginal plug at noon was considered as E0.5. Embryos were genotyped by fluorescence microscopy. The embryos were dissected and the dissection event was confirmed by checking the marker protein (e.g., GFP) fluorescence. Tissues were dissociated with Accumax (Sigma) at 37 C. Flow Cytometry experiments were performed in the VMC Flow Cytometry Shared Resource on a BD Aria I or II.

text: embryo stage

characteristic: life cycle stage

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: E8.0 Sox17^GFP/+ embryos 2


E-MTAB-2816:E9.5 Pdx1^CFP/+  embryos 1

text: Vanderbilt University

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-2816:E9.5 Pdx1^CFP/+ embryos 1

text: embryonic day 9.5

text: ArrayExpress

text: house mouse

text: pool of 5 E9.5 Pdx1^CFP/+ embryos (2 litters) Protocols: Embryos were isolated from mice on specified day of development; the presence of vaginal plug at noon was considered as E0.5. Embryos were genotyped by fluorescence microscopy. The embryos were dissected and the dissection event was confirmed by checking the marker protein (e.g., GFP) fluorescence. Tissues were dissociated with Accumax (Sigma) at 37 C. Flow Cytometry experiments were performed in the VMC Flow Cytometry Shared Resource on a BD Aria I or II.

text: embryo stage

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: B6.129S6-Pdx1tm2Mgn/Mmnc mouse strain

text: E9.5 Pdx1^CFP/+ embryos 1


E-MTAB-2816:E15.5 Ngn3^GFP/+ embryos 3

text: Vanderbilt University

text: public

characteristic: SRA accession

text: E-MTAB-2816:E15.5 Ngn3^GFP/+ embryos 3

characteristic: Submitter Id

text: embryonic day 15.5

text: ArrayExpress

text: house mouse

text: pool of 23 E15.5 Ngn3^GFP/+ embryos (8 litters) Protocols: Embryos were isolated from mice; the presence of vaginal plug at noon was considered as E0.5. Embryos obtained from heterozygous interbreeding were genotyped by fluorescence microscopy or were genotyped using PCR. Pancreatic tissues were dissociated with trypsin at 37 C for 10-60 minutes. Adult pancreas were perfused, islets handpicked, and then subject to sorting. Flow Cytometry experiments were performed in the VMC Flow Cytometry Shared Resource on a BD Aria I or II. Littermates without EGFP were used as controls to set gating.

text: embryo stage

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: E15.5 Ngn3^GFP/+ embryos 3


E-MTAB-2816:E9.5 Sox17^GFP/+ embryos 2

text: Vanderbilt University

text: public

text: E-MTAB-2816:E9.5 Sox17^GFP/+ embryos 2

text: embryonic day 9.5

text: ArrayExpress

characteristic: broker name

text: house mouse

text: pool of 27 E9.5 Sox17^GFP/+ embryos Protocols: Embryos were isolated from mice on specified day of development; the presence of vaginal plug at noon was considered as E0.5. Embryos were genotyped by fluorescence microscopy. The embryos were dissected and the dissection event was confirmed by checking the marker protein (e.g., GFP) fluorescence. Cells were immuno-labeled. Tissues were dissociated with Accumax (Sigma) at 37 C. Flow Cytometry experiments were performed in the VMC Flow Cytometry Shared Resource on a BD Aria I or II.

text: embryo stage

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Mus musculus

text: E9.5 Sox17^GFP/+ embryos 2


name: E-MTAB-2816:E15.5 Insm1^GFP/GFP embryos 3

text: Vanderbilt University

text: public

text: embryonic day 15.5

text: ArrayExpress

text: house mouse

characteristic: common name

text: pool 2 of 5 E15.5 Insm1^GFP/GFP embryos Protocols: Embryos were isolated from mice on specified day of development; the presence of vaginal plug at noon was considered as E0.5. Heterozygous embryos were identified using a fluorescent microscope, and embryos obtained from heterozygous interbreeding were genotyped using custom-designed TaqMan primers and probes. Tissues were dissociated with Accumax (Sigma) at 37 C. Flow Cytometry experiments were performed in the VMC Flow Cytometry Shared Resource on a BD Aria I or II.

characteristic: description

text: embryo stage

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Insm1tm2Mgn mouse strain

text: E15.5 Insm1^GFP/GFP embryos 3


E-MTAB-2816:E10.5 Ptf1a^YFP/+ embryos 1

characteristic: ENA-CHECKLIST

text: Vanderbilt University

text: public

text: E-MTAB-2816:E10.5 Ptf1a^YFP/+ embryos 1

text: embryonic day 10.5

text: ArrayExpress

text: house mouse

text: pool of 11 E10.5 Ptf1a^YFP/+ embryos (2 litters) Protocols: Embryos were isolated from mice on specified day of development; the presence of vaginal plug at noon was considered as E0.5. Heterozygous embryos were identified using a fluorescent microscope, and embryos obtained from heterozygous interbreeding were genotyped using custom-designed TaqMan primers and probes. Tissues were dissociated with Accumax (Sigma) at 37 C. Flow Cytometry experiments were performed in the VMC Flow Cytometry Shared Resource on a BD Aria I or II.

text: embryo stage

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: STOCK Ptf1atm1.1Mgn/Mmmh mouse strain

characteristic: strain

text: E10.5 Ptf1a^YFP/+ embryos 1


E-MTAB-2816:E15.5 Insm1^GFP/+ embryos 3

characteristic: ENA-FIRST-PUBLIC

text: Vanderbilt University

text: public

text: E-MTAB-2816:E15.5 Insm1^GFP/+ embryos 3

text: embryonic day 15.5

text: ArrayExpress

text: house mouse

text: pool of 5 E15.5 Insm1^GFP/+ embryos Protocols: Embryos were isolated from mice on specified day of development; the presence of vaginal plug at noon was considered as E0.5. Heterozygous embryos were identified using a fluorescent microscope, and embryos obtained from heterozygous interbreeding were genotyped using custom-designed TaqMan primers and probes. Tissues were dissociated with Accumax (Sigma) at 37 C. Flow Cytometry experiments were performed in the VMC Flow Cytometry Shared Resource on a BD Aria I or II.

text: embryo stage

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Insm1tm2Mgn mouse strain

text: E15.5 Insm1^GFP/+ embryos 3

characteristic: title


E-MTAB-2816:E8.5 Sox17^GFP/+ embryos 3

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Vanderbilt University

text: public

text: E-MTAB-2816:E8.5 Sox17^GFP/+ embryos 3

text: embryonic day 8.5

text: ArrayExpress

text: house mouse

text: pool of 12 E8.5 (8~10 somites) Sox17^GFP/+ embryos Protocols: Embryos were isolated from mice on specified day of development; the presence of vaginal plug at noon was considered as E0.5. Embryos were genotyped by fluorescence microscopy. The embryos were dissected and the dissection event was confirmed by checking the marker protein (e.g., GFP) fluorescence. Tissues were dissociated with Accumax (Sigma) at 37 C. Flow Cytometry experiments were performed in the VMC Flow Cytometry Shared Resource on a BD Aria I or II.

text: embryo stage

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: STOCK Sox17tm2(EGFP/cre)Mgn/Mmnc mouse strain

text: E8.5 Sox17^GFP/+ embryos 3


name: E-MTAB-2816:E15.5 Ngn3^GFP/GFP embryos 1

text: Vanderbilt University

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: embryonic day 15.5

text: ArrayExpress

text: house mouse

text: pool of 6 E15.5 Ngn3^GFP/GFP embryos (4 litters) Protocols: Embryos were isolated from mice; the presence of vaginal plug at noon was considered as E0.5. Embryos obtained from heterozygous interbreeding were genotyped by fluorescence microscopy or were genotyped using PCR. Pancreatic tissues were dissociated with trypsin at 37 C for 10-60 minutes. Adult pancreas were perfused, islets handpicked, and then subject to sorting. Flow Cytometry experiments were performed in the VMC Flow Cytometry Shared Resource on a BD Aria I or II. Littermates without EGFP were used as controls to set gating.

text: embryo stage

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: E15.5 Ngn3^GFP/GFP embryos 1


E-MTAB-2816:E15.5 Ngn3^GFP/+ embryos 2

text: Vanderbilt University

text: public

text: E-MTAB-2816:E15.5 Ngn3^GFP/+ embryos 2

text: embryonic day 15.5

characteristic: age measurement datum

text: ArrayExpress

text: house mouse

text: pool of 16 E15.5 Ngn3^GFP/+ embryos (4 litters) Protocols: Embryos were isolated from mice; the presence of vaginal plug at noon was considered as E0.5. Embryos obtained from heterozygous interbreeding were genotyped by fluorescence microscopy or were genotyped using PCR. Pancreatic tissues were dissociated with trypsin at 37 C for 10-60 minutes. Adult pancreas were perfused, islets handpicked, and then subject to sorting. Flow Cytometry experiments were performed in the VMC Flow Cytometry Shared Resource on a BD Aria I or II. Littermates without EGFP were used as controls to set gating.

text: embryo stage

characteristic: life cycle stage

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: B6.129S-Neurog3tm1(EGFP)Khk/Mmcd mouse strain

text: E15.5 Ngn3^GFP/+ embryos 2


E-MTAB-2816:E8.5 Sox17^GFP/+ embryos 1

text: Vanderbilt University

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-2816:E8.5 Sox17^GFP/+ embryos 1

text: embryonic day 8.5

text: ArrayExpress

text: house mouse

text: pool of 7 E8.5 (8~10 somites) Sox17^GFP/+ embryos Protocols: Embryos were isolated from mice on specified day of development; the presence of vaginal plug at noon was considered as E0.5. Embryos were genotyped by fluorescence microscopy. The embryos were dissected and the dissection event was confirmed by checking the marker protein (e.g., GFP) fluorescence. Tissues were dissociated with Accumax (Sigma) at 37 C. Flow Cytometry experiments were performed in the VMC Flow Cytometry Shared Resource on a BD Aria I or II.

text: embryo stage

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: E8.5 Sox17^GFP/+ embryos 1


E-MTAB-2816:P60 MIP-GFP mice 3

text: Vanderbilt University

text: public

characteristic: SRA accession

text: E-MTAB-2816:P60 MIP-GFP mice 3

characteristic: Submitter Id

text: postnatal day 60

text: ArrayExpress

text: house mouse

text: 2 adult P60 MIP-GFP mice Protocols: Embryos were isolated from mice; the presence of vaginal plug at noon was considered as E0.5. Embryos obtained from heterozygous interbreeding were genotyped by fluorescence microscopy or were genotyped using PCR. Pancreatic tissues were dissociated with trypsin at 37 C for 10-60 minutes. Adult pancreas were perfused, islets handpicked, and then subject to sorting. Flow Cytometry experiments were performed in the VMC Flow Cytometry Shared Resource on a BD Aria I or II. Littermates without EGFP were used as controls to set gating.

text: post-juvenile adult stage

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: P60 MIP-GFP mice 3


E-MTAB-2816:E16.5 MIP-GFP embryos 3

text: Vanderbilt University

text: public

text: E-MTAB-2816:E16.5 MIP-GFP embryos 3

text: embryonic day 16.5

text: ArrayExpress

characteristic: broker name

text: house mouse

text: pool of 4 E16.5 MIP-GFP embryos Protocols: Embryos were isolated from mice; the presence of vaginal plug at noon was considered as E0.5. Embryos obtained from heterozygous interbreeding were genotyped by fluorescence microscopy or were genotyped using PCR. Pancreatic tissues were dissociated with trypsin at 37 C for 10-60 minutes. Adult pancreas were perfused, islets handpicked, and then subject to sorting. Flow Cytometry experiments were performed in the VMC Flow Cytometry Shared Resource on a BD Aria I or II. Littermates without EGFP were used as controls to set gating.

text: embryo stage

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Mus musculus

text: STOCK Tg(Ins1-EGFP/GH1)14Hara/Mmmh mouse strain

text: E16.5 MIP-GFP embryos 3


E-MTAB-2816:E10.5 Ptf1a^YFP/+ embryos 2

text: Vanderbilt University

text: public

text: E-MTAB-2816:E10.5 Ptf1a^YFP/+ embryos 2

text: embryonic day 10.5

text: ArrayExpress

text: house mouse

characteristic: common name

text: pool of 21 E10.5 Ptf1a^YFP/+ embryos (3 litters) Protocols: Embryos were isolated from mice on specified day of development; the presence of vaginal plug at noon was considered as E0.5. Heterozygous embryos were identified using a fluorescent microscope, and embryos obtained from heterozygous interbreeding were genotyped using custom-designed TaqMan primers and probes. Tissues were dissociated with Accumax (Sigma) at 37 C. Flow Cytometry experiments were performed in the VMC Flow Cytometry Shared Resource on a BD Aria I or II.

characteristic: description

text: embryo stage

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: STOCK Ptf1atm1.1Mgn/Mmmh mouse strain

text: E10.5 Ptf1a^YFP/+ embryos 2


name: E-MTAB-2816:E15.5 Insm1^GFP/GFP embryos 1

characteristic: ENA-CHECKLIST

text: Vanderbilt University

text: public

text: embryonic day 15.5

text: ArrayExpress

text: house mouse

text: pool of 2 E15.5 Insm1^GFP/GFP embryos Protocols: Embryos were isolated from mice on specified day of development; the presence of vaginal plug at noon was considered as E0.5. Heterozygous embryos were identified using a fluorescent microscope, and embryos obtained from heterozygous interbreeding were genotyped using custom-designed TaqMan primers and probes. Tissues were dissociated with Accumax (Sigma) at 37 C. Flow Cytometry experiments were performed in the VMC Flow Cytometry Shared Resource on a BD Aria I or II.

text: embryo stage

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Insm1tm2Mgn mouse strain

characteristic: strain

text: E15.5 Insm1^GFP/GFP embryos 1


name: E-MTAB-2816:E15.5 Ngn3^GFP/GFP embryos 3

characteristic: ENA-FIRST-PUBLIC

text: Vanderbilt University

text: public

text: embryonic day 15.5

text: ArrayExpress

text: house mouse

text: pool of 15 E15.5 Ngn3^GFP/GFP embryos (8 litters) Protocols: Embryos were isolated from mice; the presence of vaginal plug at noon was considered as E0.5. Embryos obtained from heterozygous interbreeding were genotyped by fluorescence microscopy or were genotyped using PCR. Pancreatic tissues were dissociated with trypsin at 37 C for 10-60 minutes. Adult pancreas were perfused, islets handpicked, and then subject to sorting. Flow Cytometry experiments were performed in the VMC Flow Cytometry Shared Resource on a BD Aria I or II. Littermates without EGFP were used as controls to set gating.

text: embryo stage

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: E15.5 Ngn3^GFP/GFP embryos 3

characteristic: title


name: E-MTAB-2816:E15.5 Ngn3^GFP/GFP embryos 2

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Vanderbilt University

text: public

text: embryonic day 15.5

text: ArrayExpress

text: house mouse

text: pool of 3 E15.5 Ngn3^GFP/GFP embryos (2 litters) Protocols: Embryos were isolated from mice; the presence of vaginal plug at noon was considered as E0.5. Embryos obtained from heterozygous interbreeding were genotyped by fluorescence microscopy or were genotyped using PCR. Pancreatic tissues were dissociated with trypsin at 37 C for 10-60 minutes. Adult pancreas were perfused, islets handpicked, and then subject to sorting. Flow Cytometry experiments were performed in the VMC Flow Cytometry Shared Resource on a BD Aria I or II. Littermates without EGFP were used as controls to set gating.

text: embryo stage

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: E15.5 Ngn3^GFP/GFP embryos 2


E-MTAB-2816:P60 MIP-GFP mice 2

text: Vanderbilt University

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-2816:P60 MIP-GFP mice 2

text: postnatal day 60

text: ArrayExpress

text: house mouse

text: post-juvenile adult stage

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: P60 MIP-GFP mice 2


E-MTAB-2816:E9.5 Sox17^GFP/+ embryos 1

text: Vanderbilt University

text: public

text: E-MTAB-2816:E9.5 Sox17^GFP/+ embryos 1

text: embryonic day 9.5

characteristic: age measurement datum

text: ArrayExpress

text: house mouse

text: pool of 29 E9.5 Sox17^GFP/+ embryos Protocols: Embryos were isolated from mice on specified day of development; the presence of vaginal plug at noon was considered as E0.5. Embryos were genotyped by fluorescence microscopy. The embryos were dissected and the dissection event was confirmed by checking the marker protein (e.g., GFP) fluorescence. Cells were immuno-labeled. Tissues were dissociated with Accumax (Sigma) at 37 C. Flow Cytometry experiments were performed in the VMC Flow Cytometry Shared Resource on a BD Aria I or II.

text: embryo stage

characteristic: life cycle stage

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: E9.5 Sox17^GFP/+ embryos 1


E-MTAB-2816:E16.5 MIP-GFP embryos 2

text: Vanderbilt University

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-2816:E16.5 MIP-GFP embryos 2

text: embryonic day 16.5

text: ArrayExpress

text: house mouse

text: pool of 6 E16.5 MIP-GFP embryos Protocols: Embryos were isolated from mice; the presence of vaginal plug at noon was considered as E0.5. Embryos obtained from heterozygous interbreeding were genotyped by fluorescence microscopy or were genotyped using PCR. Pancreatic tissues were dissociated with trypsin at 37 C for 10-60 minutes. Adult pancreas were perfused, islets handpicked, and then subject to sorting. Flow Cytometry experiments were performed in the VMC Flow Cytometry Shared Resource on a BD Aria I or II. Littermates without EGFP were used as controls to set gating.

text: embryo stage

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: E16.5 MIP-GFP embryos 2


E-MTAB-2816:E10.5 Ptf1a^YFP/+ embryos 3

text: Vanderbilt University

text: public

characteristic: SRA accession

text: E-MTAB-2816:E10.5 Ptf1a^YFP/+ embryos 3

characteristic: Submitter Id

text: embryonic day 10.5

text: ArrayExpress

text: house mouse

text: pool of 32 E10.5 Ptf1a^YFP/+ embryos (6 litters) Protocols: Embryos were isolated from mice on specified day of development; the presence of vaginal plug at noon was considered as E0.5. Heterozygous embryos were identified using a fluorescent microscope, and embryos obtained from heterozygous interbreeding were genotyped using custom-designed TaqMan primers and probes. Tissues were dissociated with Accumax (Sigma) at 37 C. Flow Cytometry experiments were performed in the VMC Flow Cytometry Shared Resource on a BD Aria I or II.

text: embryo stage

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: STOCK Ptf1atm1.1Mgn/Mmmh mouse strain

text: E10.5 Ptf1a^YFP/+ embryos 3


E-MTAB-2816:P60 MIP-GFP mice 1

text: Vanderbilt University

text: public

text: E-MTAB-2816:P60 MIP-GFP mice 1

text: postnatal day 60

text: ArrayExpress

characteristic: broker name

text: house mouse

text: post-juvenile adult stage

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Mus musculus

text: P60 MIP-GFP mice 1


E-MTAB-2816:E15.5 Insm1^GFP/+ embryos 2

text: Vanderbilt University

text: public

text: E-MTAB-2816:E15.5 Insm1^GFP/+ embryos 2

text: embryonic day 15.5

text: ArrayExpress

text: house mouse

characteristic: common name

text: pool of 3 E15.5 Insm1^GFP/+ embryos Protocols: Embryos were isolated from mice on specified day of development; the presence of vaginal plug at noon was considered as E0.5. Heterozygous embryos were identified using a fluorescent microscope, and embryos obtained from heterozygous interbreeding were genotyped using custom-designed TaqMan primers and probes. Tissues were dissociated with Accumax (Sigma) at 37 C. Flow Cytometry experiments were performed in the VMC Flow Cytometry Shared Resource on a BD Aria I or II.

characteristic: description

text: embryo stage

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Insm1tm2Mgn mouse strain

text: E15.5 Insm1^GFP/+ embryos 2


E-MTAB-2816:E9.5 Sox17^GFP/+ embryos 3

characteristic: ENA-CHECKLIST

text: Vanderbilt University

text: public

text: E-MTAB-2816:E9.5 Sox17^GFP/+ embryos 3

text: embryonic day 9.5

text: ArrayExpress

text: house mouse

text: pool of 26 E9.5 Sox17^GFP/+ embryos Protocols: Embryos were isolated from mice on specified day of development; the presence of vaginal plug at noon was considered as E0.5. Embryos were genotyped by fluorescence microscopy. The embryos were dissected and the dissection event was confirmed by checking the marker protein (e.g., GFP) fluorescence. Cells were immuno-labeled. Tissues were dissociated with Accumax (Sigma) at 37 C. Flow Cytometry experiments were performed in the VMC Flow Cytometry Shared Resource on a BD Aria I or II.

text: embryo stage

text: Mus musculus

text: Mus musculus

text: Mus musculus

characteristic: strain

text: E9.5 Sox17^GFP/+ embryos 3


text: Mouse

characteristic: ArrayExpress-Species

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: house mouse

text: Mus musculus

text: mRNAseq Nextera library made from RNA extracted from mutant Ba/F3 cells

characteristic: sample description

text: Mus musculus


text: Normal tissue

characteristic: ArrayExpress-Phenotype

text: Canis lupus familiaris

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: dog

text: Canis lupus familiaris

text: Normal tissue

text: Canis lupus familiaris


text: Cancer

text: Canis lupus familiaris

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: dog

text: Canis lupus familiaris

text: Osteosarcoma

text: Canis lupus familiaris


text: Cancer

text: Canis lupus familiaris

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

text: dog

text: Canis lupus familiaris

text: Melanoma

text: Canis lupus familiaris


text: public

tag: Namespace:Science for Life Laboratory, Department of Biochemistry and Biophysics, Stockholm University

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: human

text: Protocols: RNA immunoprecipitation was performed in HCT116 cells transiently transfected with pCMVtag2b or pCMVtag2bhWig-1 and in Saos-2 TetON cells without insert or Saos-2 TetON cells stably transfected with either Flag-tagged wt Wig-1 or a Flag-tagged Wig-1 zinc-finger 1 point mutant that cannot bind to RNA. Transfected cells were lysed in RIP buffer B (150 mM KCl, 25 mM Tris-HCl, pH 7.5, 10 uM ZnCl2, 1% NP40, 1% Protease Inhibitor Cocktail, 0.5 mM DTT, 100 U/mL RNaseOUT), cleared by centrifugation at 20,000g 30 min at 4C, and filtered through a 45um filter. Lysates containing 30mg of protein were subjected to IP for 2 h rotating at 4C on 600 uL of anti-FLAG M2 beads, pre-equilibrated three times with RIP buffer A (150 mM KCl, 25 mM Tris-HCl, pH 7.5, 10 uM ZnCl2) and once with RIP buffer B rotating at 4 C for 10 min. Input was removed, and beads were washed twice with buffer B rotating at 4 C for 10 min, collected between washes by centrifugation at 50g for 2 min at 4C. RNA was extracted by two rounds of phenol/chloroform/isoamyl alcohol and one round of chloroform extraction, each round consisting of three times 30s vortexing and 30s incubation at 60C, followed by centrifugation at 20,000g for 5 min. RNA was precipitated by using 1 vol of isopropyl alcohol, 0.1 vol of sodium acetate, and 1uL of glycoblue. RNA libraries for sequencing were prepared using TruSeq RNA Sample Prep (Illumina, CA, USA).

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

characteristic: title


characteristic: ENA-CHECKLIST

text: Science for Life Laboratory, Department of Biochemistry and Biophysics, Stockholm University

text: public

text: ArrayExpress

text: human

characteristic: common name

characteristic: description

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Homo sapiens


text: adult

characteristic: ArrayExpress-DevelopmentalStage

text: earclip

characteristic: ArrayExpress-OrganismPart

text: mus musculus

characteristic: ArrayExpress-Species

characteristic: ArrayExpress-StrainOrLine

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: house mouse

text: Mus musculus

text: genomic DNA from earclips

characteristic: sample description

text: Mus musculus

characteristic: strain


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MMRI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: human

text: Donor 10 non-tumor brain,V3 capture design

text: Homo sapiens

text: Homo sapiens


characteristic: ENA-CHECKLIST

text: MMRI

text: public

characteristic: Submitter Id

text: human

characteristic: common name

text: Donor 10 tumor, V3 capture design

text: Homo sapiens

text: Homo sapiens

characteristic: title


text: MMRI

text: public

text: human

text: Donor 11 non-tumor brain,V3 capture design

characteristic: description

text: Homo sapiens

characteristic: organism

text: Homo sapiens


text: MMRI

text: public

text: human

text: Donor 11 tumor, V3 capture design

text: Homo sapiens

text: Homo sapiens


text: MMRI

text: public

text: human

text: Donor 12 non-tumor brain,V3 capture design

text: Homo sapiens

text: Homo sapiens


text: MMRI

text: public

text: human

text: Donor 12 tumor, V3 capture design

text: Homo sapiens

text: Homo sapiens


text: MMRI

text: public

text: human

text: Donor 13 non-tumor brain,V3 capture design

text: Homo sapiens

text: Homo sapiens


text: MMRI

text: public

text: human

text: Donor 13 tumor, V3 capture design

text: Homo sapiens

text: Homo sapiens


text: MMRI

text: public

text: human

text: Donor 14 non-tumor brain,V3 capture design

text: Homo sapiens

text: Homo sapiens


text: MMRI

text: public

text: human

text: Donor 14 tumor, V3 capture design

text: Homo sapiens

text: Homo sapiens


text: MMRI

text: public

text: human

text: Donor 1 non-tumor brain,V3 capture design

text: Homo sapiens

text: Homo sapiens


text: MMRI

text: public

text: human

text: Donor 1 tumor, V3 capture design

text: Homo sapiens

text: Homo sapiens


text: MMRI

text: public

text: human

text: Donor 2 non-tumor brain,V3 capture design

text: Homo sapiens

text: Homo sapiens


text: MMRI

text: public

text: human

text: Donor 2 tumor, V3 capture design

text: Homo sapiens

text: Homo sapiens


text: MMRI

text: public

text: human

text: Donor 3 non-tumor brain,V3 capture design

text: Homo sapiens

text: Homo sapiens


text: MMRI

text: public

text: human

text: Donor 3 tumor, V3 capture design

text: Homo sapiens

text: Homo sapiens


text: MMRI

text: public

text: human

text: Donor 4 non-tumor brain,V3 capture design

text: Homo sapiens

text: Homo sapiens


text: MMRI

text: public

text: human

text: Donor 4 tumor, V3 capture design

text: Homo sapiens

text: Homo sapiens


text: MMRI

text: public

text: human

text: Donor 5 non-tumor brain,V3 capture design

text: Homo sapiens

text: Homo sapiens