characteristic: ENA-CHECKLIST

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characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #3, 16 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgApos fraction. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: FACS sample with high IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: title


status: PUBLIC

tag: attribute

text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #4, 16 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the Input fraction. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

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characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

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text: mimarks-survey

characteristic: investigation type

text: Mus musculus

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text: Functional characterization of mucosal IgA-targeted members of the gut microbiota of undernourished Malawian children

characteristic: project name

text: Unfractionated FACS sample

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

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characteristic: ENA-CHECKLIST

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characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #4, 16 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgAneg fraction. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: FACS sample with low IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: title


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #4, 16 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgApos fraction. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

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text: mouse

characteristic: host common name

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with high IgA binding

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text: pyrosequencing

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text: male

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characteristic: ENA-CHECKLIST

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characteristic: INSDC first public

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #5, 16 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the Input fraction. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: Unfractionated FACS sample

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: target subfragment


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #5, 16 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgAneg fraction. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with low IgA binding

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

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characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

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characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #5, 16 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgApos fraction. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: FACS sample with high IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: target gene


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #1, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a nutritionally replete BK chow diet. This sample was fractionated by sorting the Input fraction from the sample. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: Unfractionated FACS sample

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

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characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

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text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #1, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a nutritionally replete BK chow diet. This sample was fractionated by sorting the IgAneg fraction from the sample. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: FACS sample with low IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: title


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #1, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a nutritionally replete BK chow diet. This sample was fractionated by sorting the IgApos fraction from the sample. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with high IgA binding

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

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characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

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text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #2, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a nutritionally replete BK chow diet. This sample was fractionated by sorting the Input fraction from the sample. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: Unfractionated FACS sample

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: target subfragment


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #2, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a nutritionally replete BK chow diet. This sample was fractionated by sorting the IgAneg fraction from the sample. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with low IgA binding

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #2, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a nutritionally replete BK chow diet. This sample was fractionated by sorting the IgApos fraction from the sample. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: FACS sample with high IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: target gene


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #3, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a nutritionally replete BK chow diet. This sample was fractionated by sorting the Input fraction from the sample. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: Unfractionated FACS sample

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

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characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

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text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #3, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a nutritionally replete BK chow diet. This sample was fractionated by sorting the IgAneg fraction from the sample. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: FACS sample with low IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: title


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #3, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a nutritionally replete BK chow diet. This sample was fractionated by sorting the IgApos fraction from the sample. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with high IgA binding

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #4, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a nutritionally replete BK chow diet. This sample was fractionated by sorting the Input fraction from the sample. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: Unfractionated FACS sample

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: target subfragment


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #4, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a nutritionally replete BK chow diet. This sample was fractionated by sorting the IgAneg fraction from the sample. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with low IgA binding

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #4, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a nutritionally replete BK chow diet. This sample was fractionated by sorting the IgApos fraction from the sample. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: Functional characterization of mucosal IgA-targeted members of the gut microbiota of undernourished Malawian children

text: FACS sample with high IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: target gene


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #5, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a nutritionally replete BK chow diet. This sample was fractionated by sorting the Input fraction from the sample. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: Unfractionated FACS sample

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #5, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a nutritionally replete BK chow diet. This sample was fractionated by sorting the IgAneg fraction from the sample. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: FACS sample with low IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: title


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #5, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a nutritionally replete BK chow diet. This sample was fractionated by sorting the IgApos fraction from the sample. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with high IgA binding

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #1, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the Input fraction from the sample. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: Unfractionated FACS sample

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: target subfragment


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #1, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgAneg fraction from the sample. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with low IgA binding

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #1, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgApos fraction from the sample. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: FACS sample with high IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: target gene


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #11, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the Input fraction from the sample. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: Unfractionated FACS sample

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #11, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgAneg fraction from the sample. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: FACS sample with low IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: title


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #11, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgApos fraction from the sample. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with high IgA binding

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #12, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the Input fraction from the sample. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: Unfractionated FACS sample

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: target subfragment


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #12, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgAneg fraction from the sample. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with low IgA binding

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #12, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgApos fraction from the sample. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: FACS sample with high IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: target gene


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #13, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the Input fraction from the sample. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: Unfractionated FACS sample

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #13, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgAneg fraction from the sample. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: FACS sample with low IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: title


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #13, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgApos fraction from the sample. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with high IgA binding

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #14, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the Input fraction from the sample. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: Unfractionated FACS sample

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: target subfragment


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #14, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgAneg fraction from the sample. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

text: Functional characterization of mucosal IgA-targeted members of the gut microbiota of undernourished Malawian children

characteristic: project name

text: FACS sample with low IgA binding

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #14, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgApos fraction from the sample. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: FACS sample with high IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: target gene


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #15, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the Input fraction from the sample. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: Unfractionated FACS sample

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #15, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgAneg fraction from the sample. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: FACS sample with low IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: title


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #15, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgApos fraction from the sample. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with high IgA binding

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #2, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the Input fraction from the sample. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: Unfractionated FACS sample

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: target subfragment


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #2, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgAneg fraction from the sample. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with low IgA binding

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #2, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgApos fraction from the sample. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: FACS sample with high IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: target gene


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #3, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the Input fraction from the sample. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: Unfractionated FACS sample

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #3, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgAneg fraction from the sample. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: FACS sample with low IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: title


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #3, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgApos fraction from the sample. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with high IgA binding

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #4, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the Input fraction from the sample. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: Unfractionated FACS sample

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: target subfragment


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #4, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgAneg fraction from the sample. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with low IgA binding

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #4, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgApos fraction from the sample. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: FACS sample with high IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: target gene


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #5, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the Input fraction from the sample. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: Unfractionated FACS sample

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #5, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgAneg fraction from the sample. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: FACS sample with low IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: title


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #5, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgApos fraction from the sample. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with high IgA binding

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #6, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the Input fraction from the sample. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: Functional characterization of mucosal IgA-targeted members of the gut microbiota of undernourished Malawian children

text: Unfractionated FACS sample

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: target subfragment


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #6, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgAneg fraction from the sample. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with low IgA binding

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #6, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgApos fraction from the sample. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: FACS sample with high IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: target gene


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #7, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the Input fraction from the sample. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: Unfractionated FACS sample

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #7, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgAneg fraction from the sample. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: FACS sample with low IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: title


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #7, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgApos fraction from the sample. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with high IgA binding

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #8, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the Input fraction from the sample. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: Unfractionated FACS sample

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: target subfragment


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #8, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgAneg fraction from the sample. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with low IgA binding

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #8, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgApos fraction from the sample. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: FACS sample with high IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: target gene


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #9, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the Input fraction from the sample. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: Unfractionated FACS sample

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #9, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgAneg fraction from the sample. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: FACS sample with low IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: title


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #9, 16 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgApos fraction from the sample. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with high IgA binding

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #10, 11 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: target subfragment


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #10, 18 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #6, 11 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

text: mimarks-survey

text: Mus musculus

characteristic: project name

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

characteristic: target gene


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #7, 11 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #7, 18 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA

characteristic: title


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #8, 11 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

text: Mus musculus

text: Functional characterization of mucosal IgA-targeted members of the gut microbiota of undernourished Malawian children

characteristic: project name

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #8, 18 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: target subfragment


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #9, 11 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #9, 18 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

text: mimarks-survey

text: Mus musculus

characteristic: project name

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

characteristic: target gene


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #1, 11 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #11, 11 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA

characteristic: title


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #11, 18 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

text: Mus musculus

characteristic: project name

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #12, 18 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: target subfragment


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #13, 11 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #13, 18 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

text: mimarks-survey

text: Mus musculus

characteristic: project name

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

characteristic: target gene


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #14, 11 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #14, 18 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA

characteristic: title


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #15, 11 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

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characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

text: Mus musculus

characteristic: project name

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

characteristic: target gene


characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

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text: CGS-GL

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #2, 11 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: target subfragment


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #2, 18 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #3, 11 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

text: mimarks-survey

text: Mus musculus

characteristic: project name

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

characteristic: target gene


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #3, 18 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

characteristic: host taxid

text: mimarks-survey

text: Mus musculus

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: house mouse

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #4, 11 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

text: Functional characterization of mucosal IgA-targeted members of the gut microbiota of undernourished Malawian children

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA

characteristic: title


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #4, 18 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

text: mimarks-survey

text: Mus musculus

characteristic: project name

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

characteristic: target gene