text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1463


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NCGR

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: rice

characteristic: common name

text: Indica*indica

characteristic: description

text: Oryza sativa

characteristic: organism

text: Oryza sativa

text: Hybrid rice varieties Z1464

characteristic: title


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1465


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1466


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1467


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1468


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1469


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1470


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1471


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1472


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1473


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1474


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1475


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1476


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1477


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1478


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1479


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1480


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1481


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1482


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1483


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1484


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1485


text: NCGR

text: public

text: rice

text: Indica*japonica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1486


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1487


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1488


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1489


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1490


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1491


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1492


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1493


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1494


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1495


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1496


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1497


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1498


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1499


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1500


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1501


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1502


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1503


text: NCGR

text: public

text: rice

text: Indica*indica

text: Oryza sativa

text: Oryza sativa

text: Hybrid rice varieties Z1504


text: public

tag: Namespace:MRC National Institute for Medical Research

text: ArrayExpress

characteristic: broker name

text: B cell

characteristic: cell type

text: house mouse

text: Protocols: Splenic, live B220+ CD93- IgM+ CD23+ follicular B cells were sorted by flow cytometry and then either left unstimulated or stimulated with either anti-IgM or LPS or CD40L with IL-4 Unstimulated or in vitro for 6 h with either anti-IgM or LPS or CD40L with IL-4 Trizol RNA extraction followed by RNEasy Mini Kit clean up TruSeq RNA sample preparation kit (Illumina)

text: wild type genotype

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: spleen

characteristic: organism part

text: Mus musculus

text: fresh specimen

characteristic: specimen with known storage state

characteristic: strain

type: has member


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MRC National Institute for Medical Research

text: public

text: ArrayExpress

text: B cell

text: house mouse

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: spleen

text: Mus musculus

text: fresh specimen


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: B cell

text: house mouse

text: gene knock out

characteristic: genetic modification

text: Mus musculus

text: Mus musculus

text: spleen

text: Mus musculus

text: fresh specimen


ABUKUMA NATANE_PBY056

text: IPK-Gatersleben

text: public

characteristic: SRA accession

text: ABUKUMA NATANE_PBY056

characteristic: Submitter Id

text: rape

characteristic: common name

text: Brassica napus

characteristic: organism

text: Brassica napus

text: ABUKUMA NATANE


text: IPK-Gatersleben

text: public

text: rape

text: Brassica napus

text: Brassica napus

text: Alaska

characteristic: title


text: IPK-Gatersleben

text: public

text: rape

text: Brassica napus

text: Brassica napus

text: Major


text: IPK-Gatersleben

text: public

text: rape

text: Brassica napus

text: Brassica napus

text: Aragon


text: IPK-Gatersleben

text: public

text: rape

text: Brassica napus

text: Brassica napus

text: Beluga


text: IPK-Gatersleben

text: public

text: rape

text: Brassica napus

text: Brassica napus

text: EXPERT


text: IPK-Gatersleben

text: public

text: rape

text: Brassica napus

text: Brassica napus

text: Darmor


text: IPK-Gatersleben

text: public

text: rape

text: Brassica napus

text: Brassica napus

text: Dippes


text: IPK-Gatersleben

text: public

text: rape

text: Brassica napus

text: Brassica napus


text: IPK-Gatersleben

text: public

text: rape

text: Brassica napus

text: Brassica napus

text: EVVIN


Fortin Family_PBY059

text: IPK-Gatersleben

text: public

text: Fortin Family_PBY059

text: rape

text: Brassica napus

text: Brassica napus

text: Fortin Family


G 50_PBY031

text: IPK-Gatersleben

text: public

text: G 50_PBY031

text: rape

text: Brassica napus

text: Brassica napus

text: G 50


Gross Luesewitzer_PBY002

text: IPK-Gatersleben

text: public

text: Gross Luesewitzer_PBY002

text: rape

text: Brassica napus

text: Brassica napus

text: Gross Luesewitzer


H 149_PBY033

text: IPK-Gatersleben

text: public

text: H 149_PBY033

text: rape

text: Brassica napus

text: Brassica napus

text: H 149


H 176_PBY035

text: IPK-Gatersleben

text: public

text: H 176_PBY035

text: rape

text: Brassica napus

text: Brassica napus

text: H 176


text: IPK-Gatersleben

text: public

text: rape

text: Brassica napus

text: Brassica napus

text: Nunsdale


text: IPK-Gatersleben

text: public

text: rape

text: Brassica napus

text: Brassica napus

text: OLIMPIADE


OLL 1_PBY043

text: IPK-Gatersleben

text: public

text: OLL 1_PBY043

text: rape

text: Brassica napus

text: Brassica napus

text: OLL 1


text: IPK-Gatersleben

text: public

text: rape

text: Brassica napus

text: Brassica napus

text: Palu


text: IPK-Gatersleben

text: public

text: rape

text: Brassica napus

text: Brassica napus

text: Pirola


R 99_PBY046

text: IPK-Gatersleben

text: public

text: R 99_PBY046

text: rape

text: Brassica napus

text: Brassica napus

text: R 99


text: IPK-Gatersleben

text: public

text: rape

text: Brassica napus

text: Brassica napus

text: Rapid


RS 10/7_PBY039

text: IPK-Gatersleben

text: public

text: RS 10/7_PBY039

text: rape

text: Brassica napus

text: Brassica napus

text: RS 10/7


RS 7/6_PBY047

text: IPK-Gatersleben

text: public

text: RS 7/6_PBY047

text: rape

text: Brassica napus

text: Brassica napus

text: RS 7/6


RS 8/6_PBY048

text: IPK-Gatersleben

text: public

text: RS 8/6_PBY048

text: rape

text: Brassica napus

text: Brassica napus

text: RS 8/6


S 13_PBY041

text: IPK-Gatersleben

text: public

text: S 13_PBY041

text: rape

text: Brassica napus

text: Brassica napus

text: S 13


S 39_PBY049

text: IPK-Gatersleben

text: public

text: S 39_PBY049

text: rape

text: Brassica napus

text: Brassica napus

text: S 39


text: IPK-Gatersleben

text: public

text: rape

text: Brassica napus

text: Brassica napus

text: Skziverskij


text: IPK-Gatersleben

text: public

text: rape

text: Brassica napus

text: Brassica napus

text: Start


text: IPK-Gatersleben

text: public

text: rape

text: Brassica napus

text: Brassica napus

text: Wotan


DH 5_PBY061

text: IPK-Gatersleben

text: public

text: DH 5_PBY061

text: rape

text: Brassica napus

text: Brassica napus

text: DH 5 (Oase*Nugget)


text: IPK-Gatersleben

text: public

text: rape

text: Brassica napus

text: Brassica napus


RS 13/6_PBY040

text: IPK-Gatersleben

text: public

text: RS 13/6_PBY040

text: rape

text: Brassica napus

text: Brassica napus

text: RS 13/6


RS 4/6_PBY038

text: IPK-Gatersleben

text: public

text: RS 4/6_PBY038

text: rape

text: Brassica napus

text: Brassica napus

text: RS 4/6


CRY 1_PBY050

text: IPK-Gatersleben

text: public

text: CRY 1_PBY050

text: rape

text: Brassica napus

text: Brassica napus

text: CRY 1


HIY 1_PBY051

text: IPK-Gatersleben

text: public

text: HIY 1_PBY051

text: rape

text: Brassica napus

text: Brassica napus

text: HIY 1


MOY 4_PBY052

text: IPK-Gatersleben

text: public

text: MOY 4_PBY052

text: rape

text: Brassica napus

text: Brassica napus

text: MOY 4


text: IPK-Gatersleben

text: public

text: rape

text: Brassica napus

text: Brassica napus

text: Pacific


Canberra x Courage DH line_PBY017

text: IPK-Gatersleben

text: public

text: Canberra x Courage DH line_PBY017

text: rape

text: Brassica napus

text: Brassica napus

text: Canberra x Courage DH line


text: IPK-Gatersleben

text: public

text: rape

text: Brassica napus

text: Brassica napus

text: Savannah


text: IPK-Gatersleben

text: public

text: rape

text: Brassica napus

text: Brassica napus

text: Vivol


Resyn-Go S4_PBY021

text: IPK-Gatersleben

text: public

text: Resyn-Go S4_PBY021

text: rape

text: Brassica napus

text: Brassica napus

text: Resyn-Go S4


text: IPK-Gatersleben

text: public

text: rape

text: Brassica napus

text: Brassica napus

text: Jupiter


English Giant 194_PBY053

text: IPK-Gatersleben

text: public

text: English Giant 194_PBY053

text: rape

text: Brassica napus

text: Brassica napus

text: English Giant 194


text: IPK-Gatersleben

text: public

text: rape

text: Brassica napus

text: Brassica napus

text: Kromerska


text: University of Liverpool

text: public

tag: Namespace:University of Liverpool

text: 74 year

characteristic: age

text: ArrayExpress

characteristic: broker name

text: human

text: Protocols: Full thickness achilles tendon was removed from the mid tendon. All samples were grossly normal. For RNA extraction the Guanidium-thiocyanate-phenol-chloroform technique, with ethanol extraction was used (Chomczynski, P. and N. Sacchi, Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction. Anal Biochem, 1987

characteristic: description

text: normal

characteristic: disease

text: Homo sapiens

text: Homo sapiens

text: Achilles tendon

characteristic: organism part

text: Homo sapiens

text: fresh sample


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Liverpool

text: public

text: 14 year

text: ArrayExpress

text: human

text: normal

text: Homo sapiens

text: Homo sapiens

text: Achilles tendon

text: Homo sapiens

text: fresh sample

characteristic: specimen with known storage state


characteristic: External Id

text: University of Liverpool

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: 16 year

text: ArrayExpress

text: human

text: normal

text: Homo sapiens

text: Homo sapiens

text: Achilles tendon

text: Homo sapiens

text: fresh sample


text: University of Liverpool

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 79 year

text: ArrayExpress

text: human

text: normal

text: Homo sapiens

text: Homo sapiens

text: Achilles tendon

text: Homo sapiens

text: fresh sample


text: University of Liverpool

text: public

text: 60 year

text: ArrayExpress

text: human

characteristic: common name

text: normal

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Achilles tendon

text: Homo sapiens

text: fresh sample

characteristic: title


text: University of Liverpool

text: public

text: 66 year

characteristic: age

text: ArrayExpress

characteristic: broker name

text: human

characteristic: description

text: normal

text: Homo sapiens

text: Homo sapiens

text: Achilles tendon

text: Homo sapiens

text: fresh sample


characteristic: ENA-CHECKLIST

text: University of Liverpool

text: public

text: 21 year

text: ArrayExpress

text: human

text: normal

characteristic: disease

text: Homo sapiens

text: Homo sapiens

text: Achilles tendon

characteristic: organism part

text: Homo sapiens

text: fresh sample


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Liverpool

text: public

text: 27 year

text: ArrayExpress

text: human

text: normal

text: Homo sapiens

text: Homo sapiens

text: Achilles tendon

text: Homo sapiens

text: fresh sample

characteristic: specimen with known storage state


characteristic: External Id

text: University of Liverpool

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: 68 year

text: ArrayExpress

text: human

text: normal

text: Homo sapiens

text: Homo sapiens

text: Achilles tendon

text: Homo sapiens

text: fresh sample


text: male

characteristic: ArrayExpress-Sex

text: Mus musculus

characteristic: ArrayExpress-Species

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: house mouse

text: Mus musculus

text: Pooled PCR products

characteristic: sample description

text: Mus musculus


text: CGS-GL

text: public

characteristic: Sort Day

characteristic: Submitter Id

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from humanized mouse #16, 13 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. This sample was generated by collecting the Input fraction via fluorescence-assisted cytometric sorting. Please see our paper for additional details.

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

unit: number

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

text: Functional characterization of mucosal IgA-targeted members of the gut microbiota of undernourished Malawian children

characteristic: project name

text: Unfractionated FACS sample

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from humanized mouse #16, 13 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. This sample was generated by collecting the IgAneg fraction via fluorescence-assisted cytometric sorting. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

text: host-associated

text: USA

text: mouse

text: mimarks-survey

text: Mus musculus

text: FACS sample with low IgA binding

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA


text: CGS-GL

text: public

text: house mouse

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from humanized mouse #16, 13 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. This sample was generated by collecting the IgApos fraction via fluorescence-assisted cytometric sorting. Please see our paper for additional details.

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with high IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from humanized mouse #17, 13 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. This sample was generated by collecting the Input fraction via fluorescence-assisted cytometric sorting. Please see our paper for additional details.

characteristic: description

text: host-associated

text: USA

text: mouse

text: mimarks-survey

text: Mus musculus

text: Unfractionated FACS sample

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA

characteristic: title


text: CGS-GL

text: public

text: house mouse

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from humanized mouse #17, 13 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. This sample was generated by collecting the IgAneg fraction via fluorescence-assisted cytometric sorting. Please see our paper for additional details.

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with low IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from humanized mouse #17, 13 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. This sample was generated by collecting the IgApos fraction via fluorescence-assisted cytometric sorting. Please see our paper for additional details.

characteristic: description

text: host-associated

text: USA

text: mouse

text: mimarks-survey

text: Mus musculus

text: FACS sample with high IgA binding

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA

characteristic: target subfragment


text: CGS-GL

text: public

text: house mouse

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from humanized mouse #18, 13 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. This sample was generated by collecting the Input fraction via fluorescence-assisted cytometric sorting. Please see our paper for additional details.

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: Unfractionated FACS sample

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from humanized mouse #18, 13 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. This sample was generated by collecting the IgAneg fraction via fluorescence-assisted cytometric sorting. Please see our paper for additional details.

characteristic: description

text: host-associated

text: USA

text: mouse

text: mimarks-survey

text: Mus musculus

text: FACS sample with low IgA binding

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA

characteristic: target gene


text: CGS-GL

text: public

text: house mouse

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from humanized mouse #18, 13 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. This sample was generated by collecting the IgApos fraction via fluorescence-assisted cytometric sorting. Please see our paper for additional details.

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with high IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from humanized mouse #19, 13 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. This sample was generated by collecting the Input fraction via fluorescence-assisted cytometric sorting. Please see our paper for additional details.

characteristic: description

text: host-associated

text: USA

text: mouse

text: mimarks-survey

text: Mus musculus

text: Unfractionated FACS sample

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA

characteristic: title


text: CGS-GL

text: public

text: house mouse

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from humanized mouse #19, 13 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. This sample was generated by collecting the IgAneg fraction via fluorescence-assisted cytometric sorting. Please see our paper for additional details.

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with low IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from humanized mouse #19, 13 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. This sample was generated by collecting the IgApos fraction via fluorescence-assisted cytometric sorting. Please see our paper for additional details.

characteristic: description

text: host-associated

text: USA

text: mouse

text: mimarks-survey

text: Mus musculus

text: FACS sample with high IgA binding

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA

characteristic: target subfragment


text: CGS-GL

text: public

text: house mouse

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from humanized mouse #20, 13 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. This sample was generated by collecting the Input fraction via fluorescence-assisted cytometric sorting. Please see our paper for additional details.

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: Unfractionated FACS sample

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from humanized mouse #20, 13 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. This sample was generated by collecting the IgAneg fraction via fluorescence-assisted cytometric sorting. Please see our paper for additional details.

characteristic: description

text: host-associated

text: USA

text: mouse

text: mimarks-survey

text: Mus musculus

text: FACS sample with low IgA binding

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA

characteristic: target gene


text: CGS-GL

text: public

text: house mouse

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from humanized mouse #20, 13 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. This sample was generated by collecting the IgApos fraction via fluorescence-assisted cytometric sorting. Please see our paper for additional details.

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with high IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from humanized mouse #11, 13 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was generated by collecting the Input fraction via fluorescence-assisted cytometric sorting. Please see our paper for additional details.

characteristic: description

text: host-associated

text: USA

text: mouse

text: mimarks-survey

text: Mus musculus

text: Unfractionated FACS sample

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA

characteristic: title


text: CGS-GL

text: public

text: house mouse

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from humanized mouse #11, 13 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was generated by collecting the IgAneg fraction via fluorescence-assisted cytometric sorting. Please see our paper for additional details.

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with low IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from humanized mouse #11, 13 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was generated by collecting the IgApos fraction via fluorescence-assisted cytometric sorting. Please see our paper for additional details.

characteristic: description

text: host-associated

text: USA

text: mouse

text: mimarks-survey

text: Mus musculus

text: Functional characterization of mucosal IgA-targeted members of the gut microbiota of undernourished Malawian children

text: FACS sample with high IgA binding

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA

characteristic: target subfragment


text: CGS-GL

text: public

text: house mouse

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from humanized mouse #12, 13 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was generated by collecting the Input fraction via fluorescence-assisted cytometric sorting. Please see our paper for additional details.

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: Unfractionated FACS sample

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from humanized mouse #12, 13 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was generated by collecting the IgAneg fraction via fluorescence-assisted cytometric sorting. Please see our paper for additional details.

characteristic: description

text: host-associated

text: USA

text: mouse

text: mimarks-survey

text: Mus musculus

text: FACS sample with low IgA binding

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA

characteristic: target gene


text: CGS-GL

text: public

text: house mouse

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from humanized mouse #12, 13 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was generated by collecting the IgApos fraction via fluorescence-assisted cytometric sorting. Please see our paper for additional details.

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with high IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from humanized mouse #13, 13 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was generated by collecting the Input fraction via fluorescence-assisted cytometric sorting. Please see our paper for additional details.

characteristic: description

text: host-associated

text: USA

text: mouse

text: mimarks-survey

text: Mus musculus

text: Unfractionated FACS sample

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA

characteristic: title


text: CGS-GL

text: public

text: house mouse

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from humanized mouse #13, 13 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was generated by collecting the IgAneg fraction via fluorescence-assisted cytometric sorting. Please see our paper for additional details.

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with low IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from humanized mouse #13, 13 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was generated by collecting the IgApos fraction via fluorescence-assisted cytometric sorting. Please see our paper for additional details.

characteristic: description

text: host-associated

text: USA

text: mouse

text: mimarks-survey

text: Mus musculus

text: FACS sample with high IgA binding

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA

characteristic: target subfragment


text: CGS-GL

text: public

text: house mouse

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from humanized mouse #14, 13 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was generated by collecting the Input fraction via fluorescence-assisted cytometric sorting. Please see our paper for additional details.

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: Unfractionated FACS sample

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from humanized mouse #14, 13 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was generated by collecting the IgAneg fraction via fluorescence-assisted cytometric sorting. Please see our paper for additional details.

characteristic: description

text: host-associated

text: USA

text: mouse

text: mimarks-survey

text: Mus musculus

text: FACS sample with low IgA binding

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA

characteristic: target gene


text: CGS-GL

text: public

text: house mouse

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from humanized mouse #14, 13 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was generated by collecting the IgApos fraction via fluorescence-assisted cytometric sorting. Please see our paper for additional details.

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with high IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from humanized mouse #15, 13 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was generated by collecting the Input fraction via fluorescence-assisted cytometric sorting. Please see our paper for additional details.

characteristic: description

text: host-associated

text: USA

text: mouse

text: mimarks-survey

text: Mus musculus

text: Unfractionated FACS sample

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA

characteristic: title


text: CGS-GL

text: public

text: house mouse

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from humanized mouse #15, 13 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was generated by collecting the IgAneg fraction via fluorescence-assisted cytometric sorting. Please see our paper for additional details.

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with low IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from humanized mouse #15, 13 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was generated by collecting the IgApos fraction via fluorescence-assisted cytometric sorting. Please see our paper for additional details.

characteristic: description

text: host-associated

text: USA

text: mouse

text: mimarks-survey

text: Mus musculus

text: FACS sample with high IgA binding

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA

characteristic: target subfragment


text: CGS-GL

text: public

text: house mouse

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #17, 13 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a nutritionally replete BK chow diet. This sample was fractionated by sorting the Input fraction from the sample. Please see our paper for additional details.

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: Unfractionated FACS sample

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #17, 13 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a nutritionally replete BK chow diet. This sample was fractionated by sorting the IgAneg fraction from the sample. Please see our paper for additional details.

characteristic: description

text: host-associated

text: USA

text: mouse

text: mimarks-survey

text: Mus musculus

text: FACS sample with low IgA binding

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA

characteristic: target gene


text: CGS-GL

text: public

text: house mouse

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #17, 13 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a nutritionally replete BK chow diet. This sample was fractionated by sorting the IgApos fraction from the sample. Please see our paper for additional details.

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with high IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #18, 13 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a nutritionally replete BK chow diet. This sample was fractionated by sorting the Input fraction from the sample. Please see our paper for additional details.

characteristic: description

text: host-associated

text: USA

text: mouse

text: mimarks-survey

text: Mus musculus

text: Unfractionated FACS sample

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA

characteristic: title


text: CGS-GL

text: public

text: house mouse

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #18, 13 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a nutritionally replete BK chow diet. This sample was fractionated by sorting the IgAneg fraction from the sample. Please see our paper for additional details.

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

text: Functional characterization of mucosal IgA-targeted members of the gut microbiota of undernourished Malawian children

characteristic: project name

text: FACS sample with low IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #18, 13 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a nutritionally replete BK chow diet. This sample was fractionated by sorting the IgApos fraction from the sample. Please see our paper for additional details.

characteristic: description

text: host-associated

text: USA

text: mouse

text: mimarks-survey

text: Mus musculus

text: FACS sample with high IgA binding

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA

characteristic: target subfragment


text: CGS-GL

text: public

text: house mouse

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #19, 13 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a nutritionally replete BK chow diet. This sample was fractionated by sorting the Input fraction from the sample. Please see our paper for additional details.

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: Unfractionated FACS sample

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #19, 13 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a nutritionally replete BK chow diet. This sample was fractionated by sorting the IgAneg fraction from the sample. Please see our paper for additional details.

characteristic: description

text: host-associated

text: USA

text: mouse

text: mimarks-survey

text: Mus musculus

text: FACS sample with low IgA binding

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA

characteristic: target gene


text: CGS-GL

text: public

text: house mouse

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #19, 13 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a nutritionally replete BK chow diet. This sample was fractionated by sorting the IgApos fraction from the sample. Please see our paper for additional details.

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with high IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #20, 13 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a nutritionally replete BK chow diet. This sample was fractionated by sorting the Input fraction from the sample. Please see our paper for additional details.

characteristic: description

text: host-associated

text: USA

text: mouse

text: mimarks-survey

text: Mus musculus

text: Unfractionated FACS sample

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA

characteristic: title


text: CGS-GL

text: public

text: house mouse

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #20, 13 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a nutritionally replete BK chow diet. This sample was fractionated by sorting the IgAneg fraction from the sample. Please see our paper for additional details.

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with low IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #20, 13 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a nutritionally replete BK chow diet. This sample was fractionated by sorting the IgApos fraction from the sample. Please see our paper for additional details.

characteristic: description

text: host-associated

text: USA

text: mouse

text: mimarks-survey

text: Mus musculus

text: FACS sample with high IgA binding

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA

characteristic: target subfragment


text: CGS-GL

text: public

text: house mouse

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #11, 13 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the Input fraction from the sample. Please see our paper for additional details.

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: Unfractionated FACS sample

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #11, 13 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgAneg fraction from the sample. Please see our paper for additional details.

characteristic: description

text: host-associated

text: USA

text: mouse

text: mimarks-survey

text: Mus musculus

text: FACS sample with low IgA binding

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA

characteristic: target gene


text: CGS-GL

text: public

text: house mouse

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #11, 13 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgApos fraction from the sample. Please see our paper for additional details.

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with high IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #12, 13 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the Input fraction from the sample. Please see our paper for additional details.

characteristic: description

text: host-associated

text: USA

text: mouse

text: mimarks-survey

text: Mus musculus

text: Unfractionated FACS sample

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA

characteristic: title


text: CGS-GL

text: public

text: house mouse

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #12, 13 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgAneg fraction from the sample. Please see our paper for additional details.

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with low IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #12, 13 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgApos fraction from the sample. Please see our paper for additional details.

characteristic: description

text: host-associated

text: USA

text: mouse

text: mimarks-survey

text: Mus musculus

text: FACS sample with high IgA binding

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA

characteristic: target subfragment


text: CGS-GL

text: public

text: house mouse

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #13, 13 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgAneg fraction from the sample. Please see our paper for additional details.

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with low IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #13, 13 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgApos fraction from the sample. Please see our paper for additional details.

characteristic: description

text: host-associated

text: USA

text: mouse

text: mimarks-survey

text: Mus musculus

text: FACS sample with high IgA binding

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA

characteristic: target gene


text: CGS-GL

text: public

text: house mouse

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #13, 13 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the Input fraction from the sample. Please see our paper for additional details.

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: Unfractionated FACS sample

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #14, 13 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the Input fraction from the sample. Please see our paper for additional details.

characteristic: description

text: host-associated

text: USA

text: mouse

text: mimarks-survey

text: Mus musculus

text: Functional characterization of mucosal IgA-targeted members of the gut microbiota of undernourished Malawian children

text: Unfractionated FACS sample

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA

characteristic: title


text: CGS-GL

text: public

text: house mouse

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #14, 13 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgAneg fraction from the sample. Please see our paper for additional details.

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with low IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #14, 13 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgApos fraction from the sample. Please see our paper for additional details.

characteristic: description

text: host-associated

text: USA

text: mouse

text: mimarks-survey

text: Mus musculus

text: FACS sample with high IgA binding

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA

characteristic: target subfragment


text: CGS-GL

text: public

text: house mouse

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #15, 13 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the Input fraction from the sample. Please see our paper for additional details.

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: Unfractionated FACS sample

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Sort Day

characteristic: Submitter Id

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #15, 13 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgAneg fraction from the sample. Please see our paper for additional details.

characteristic: description

text: host-associated

text: USA

text: mouse

text: mimarks-survey

text: Mus musculus

text: FACS sample with low IgA binding

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA

characteristic: target gene


text: CGS-GL

text: public

text: house mouse

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #15, 13 days after colonization with the fecal microbiota of the co-twin with kwashiorkor 57A. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the IgApos fraction from the sample. Please see our paper for additional details.

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: host-associated

characteristic: environmental package

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

characteristic: host taxid

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

characteristic: project name

text: FACS sample with high IgA binding

characteristic: sample collection device or method

text: Mus musculus

text: pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGS-GL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #16, 10 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. Please see our paper for additional details.

characteristic: description

text: host-associated

text: USA

text: mouse

text: mimarks-survey

text: Mus musculus

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA

characteristic: title


text: CGS-GL

text: public

text: house mouse

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #16, 16 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. Please see our paper for additional details.

characteristic: environment (biome)

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text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #16, 21 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. Please see our paper for additional details.

text: host-associated

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text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #16, 41 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. Please see our paper for additional details.

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text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #17, 10 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. Please see our paper for additional details.

text: host-associated

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text: CGS-GL

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text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #17, 16 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. Please see our paper for additional details.

characteristic: description

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text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #17, 21 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. Please see our paper for additional details.

text: host-associated

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text: pyrosequencing

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text: CGS-GL

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characteristic: common name

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #17, 41 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. Please see our paper for additional details.

characteristic: description

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text: house mouse

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #18, 10 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. Please see our paper for additional details.

text: host-associated

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text: pyrosequencing

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text: CGS-GL

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text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #18, 16 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. Please see our paper for additional details.

characteristic: description

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text: public

characteristic: INSDC status

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text: house mouse

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #18, 21 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

text: mimarks-survey

text: Mus musculus

characteristic: project name

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text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

characteristic: target gene


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #18, 41 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

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text: host-associated

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text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mouse

characteristic: host common name

characteristic: host taxid

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text: Functional characterization of mucosal IgA-targeted members of the gut microbiota of undernourished Malawian children

text: Mus musculus

text: pyrosequencing

text: male

characteristic: sex

text: 16S rRNA

characteristic: target subfragment


characteristic: ENA-CHECKLIST

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: house mouse

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #19, 10 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. Please see our paper for additional details.

text: host-associated

text: USA

text: mouse

text: mimarks-survey

characteristic: investigation type

text: Mus musculus

characteristic: organism

text: Mus musculus

text: pyrosequencing

text: male

text: 16S rRNA

characteristic: title


text: CGS-GL

text: public

characteristic: collection date

text: house mouse

characteristic: common name

text: Experiment A: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #19, 16 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. Please see our paper for additional details.

characteristic: description

characteristic: environment (biome)

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text: host-associated

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text: USA

characteristic: geographic location (latitude)

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text: mouse

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text: mimarks-survey

text: Mus musculus

characteristic: project name

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text: pyrosequencing

characteristic: sequencing method

text: male

text: 16S rRNA

characteristic: target gene