characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIMARKS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: ENA-STANDARD

characteristic: External Id

text: NEBC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 2196.8 micromol per kilogram

characteristic: alkalinity

text: 4 liter

characteristic: amount or size of sample collected

text: NAST Alignment Tool

characteristic: assembly

text: Mallard 1.02

characteristic: chimera check

text: 0.58 micrograms per liter

characteristic: chlorophyll

characteristic: collection date

text: marine biome, fjord, coastal water, sample ws_54

characteristic: description

text: marine biome, fjord, coastal water

text: carbon dioxide

text: 0 meters

text: Norway:Raunefjord

text: 0 meters

text: +60.27, +5.22

text: MIMARKS-survey

text: paired-end

text: pCR4-TOPO (InVitrogen)

text: marine metagenome

characteristic: organism

text: Bergen Mesocosm May 2006

text: 31.4 practical salinity units

text: Bucket on a string

text: Whatman GF/A pre-filtration

text: marine metagenome

text: Sanger

text: salt water


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIMARKS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

text: NEBC

text: public

text: 2191.4 micromol per kilogram

text: 0.75 liters

text: NAST Alignment Tool

text: Mallard 1.02

text: 1.86 micrograms per liter

text: marine biome, fjord, coastal water, sample ws_146

text: marine biome, fjord, coastal water

characteristic: environment

text: carbon dioxide

characteristic: experimental factor

text: 0 meters

text: Norway:Raunefjord

characteristic: geographic location (country)

text: 0 meters

characteristic: geographic location (depth)

text: +60.27, +5.22

text: MIMARKS-survey

characteristic: investigation type

text: paired-end

characteristic: library construction method

text: pCR4-TOPO (InVitrogen)

characteristic: library vector

characteristic: nucleic acid extraction

text: marine metagenome

characteristic: ph

text: Bergen Mesocosm May 2006

characteristic: project name

characteristic: relevant standard operating procedures

text: 31.4 practical salinity units

characteristic: salinity

text: Bucket on a string

characteristic: sample collection device or method

text: Whatman GF/A pre-filtration

characteristic: sample material processing

text: marine metagenome

text: Sanger

characteristic: sequencing method

text: salt water

characteristic: substrate


characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIMARKS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: ENA-STANDARD

text: NEBC

text: public

text: 2188.2 micromol per kilogram

characteristic: alkalinity

text: 0.75 liters

characteristic: amount or size of sample collected

text: NAST Alignment Tool

characteristic: assembly

text: Mallard 1.02

characteristic: chimera check

text: 1.81 micrograms per liter

characteristic: chlorophyll

characteristic: collection date

text: marine biome, fjord, coastal water, sample ws_138

characteristic: description

text: marine biome, fjord, coastal water

characteristic: environment

text: carbon dioxide

characteristic: experimental factor

text: 0 meters

text: Norway:Raunefjord

characteristic: geographic location (country)

text: 0 meters

characteristic: geographic location (depth)

text: +60.27, +5.22

text: MIMARKS-survey

characteristic: investigation type

text: paired-end

characteristic: library construction method

text: pCR4-TOPO (InVitrogen)

characteristic: library vector

characteristic: nucleic acid extraction

text: marine metagenome

text: Bergen Mesocosm May 2006

text: 31.5 practical salinity units

text: Bucket on a string

text: Whatman GF/A pre-filtration

text: marine metagenome

text: Sanger

text: salt water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIMARKS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NEBC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 2197.2 micromol per kilogram

text: 4 liter

text: NAST Alignment Tool

text: Mallard 1.02

text: 1.11 micrograms per liter

text: marine biome, fjord, coastal water, sample ws_59

text: marine biome, fjord, coastal water

text: carbon dioxide

text: 0 meters

text: Norway:Raunefjord

text: 0 meters

text: +60.27, +5.22

text: MIMARKS-survey

text: paired-end

text: pCR4-TOPO (InVitrogen)

text: marine metagenome

characteristic: organism

characteristic: ph

text: Bergen Mesocosm May 2006

characteristic: project name

characteristic: relevant standard operating procedures

text: 31.4 practical salinity units

characteristic: salinity

text: Bucket on a string

characteristic: sample collection device or method

text: Whatman GF/A pre-filtration

characteristic: sample material processing

text: marine metagenome

text: Sanger

characteristic: sequencing method

text: salt water

characteristic: substrate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIMARKS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: ENA-STANDARD

text: NEBC

text: public

text: 2188.9 micromol per kilogram

characteristic: alkalinity

text: 2 liter

characteristic: amount or size of sample collected

text: NAST Alignment Tool

characteristic: assembly

text: Mallard 1.02

characteristic: chimera check

text: 14.48 micrograms per liter

characteristic: chlorophyll

characteristic: collection date

text: marine biome, fjord, coastal water, sample ws_96

characteristic: description

text: marine biome, fjord, coastal water

characteristic: environment

text: carbon dioxide

characteristic: experimental factor

text: 0 meters

text: Norway:Raunefjord

characteristic: geographic location (country)

text: 0 meters

characteristic: geographic location (depth)

text: +60.27, +5.22

text: MIMARKS-survey

characteristic: investigation type

text: paired-end

characteristic: library construction method

text: pCR4-TOPO (InVitrogen)

characteristic: library vector

characteristic: nucleic acid extraction

text: marine metagenome

text: Bergen Mesocosm May 2006

text: 31.4 practical salinity units

text: Bucket on a string

text: Whatman GF/A pre-filtration

text: marine metagenome

text: Sanger

text: salt water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIMARKS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NEBC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 2193.9 micromols per kilogram

text: 9 liter

text: NAST Alignment Tool

text: Mallard 1.02

text: 2.67 micrograms per liter

text: marine biome, fjord, coastal water, sample ws_191

text: marine biome, fjord, coastal water

text: carbon dioxide

text: 0 meters

text: Norway:Raunefjord

text: 0 meters

text: +60.27, +5.22

text: MIMARKS-survey

text: paired-end

text: pCR4-TOPO (InVitrogen)

text: marine metagenome

characteristic: organism

characteristic: ph

text: Bergen Mesocosm May 2006

characteristic: project name

characteristic: relevant standard operating procedures

text: 31.4 practical salinity units

characteristic: salinity

text: Bucket on a string

characteristic: sample collection device or method

text: Whatman GF/A pre-filtration

characteristic: sample material processing

text: marine metagenome

text: Sanger

characteristic: sequencing method

text: salt water

characteristic: substrate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIMARKS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: ENA-STANDARD

text: NEBC

text: public

text: 2198.3 micromols per kilogram

characteristic: alkalinity

text: 9 liter

characteristic: amount or size of sample collected

text: NAST Alignment Tool

characteristic: assembly

text: Mallard 1.02

characteristic: chimera check

text: 0.86 micrograms per liter

characteristic: chlorophyll

characteristic: collection date

text: marine biome, fjord, coastal water, sample ws_187

characteristic: description

text: marine biome, fjord, coastal water

characteristic: environment

text: carbon dioxide

characteristic: experimental factor

text: 0 meters

text: Norway:Raunefjord

characteristic: geographic location (country)

text: 0 meters

characteristic: geographic location (depth)

text: +60.27, +5.22

text: MIMARKS-survey

characteristic: investigation type

text: paired-end

characteristic: library construction method

text: pCR4-TOPO (InVitrogen)

characteristic: library vector

characteristic: nucleic acid extraction

text: marine metagenome

text: Bergen Mesocosm May 2006

text: 31.4 practical salinity units

text: Bucket on a string

text: Whatman GF/A pre-filtration

text: marine metagenome

text: Sanger

text: salt water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIMARKS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NEBC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 2152.6 micromol per kilogram

text: 0.75 liters

text: NAST Alignment Tool

text: Mallard 1.02

text: 2.6 micrograms per liter

text: marine biome, fjord, coastal water, sample ws_149

text: marine biome, fjord, coastal water

text: carbon dioxide

text: 0 meters

text: Norway:Raunefjord

text: 0 meters

text: +60.27, +5.22

text: MIMARKS-survey

text: paired-end

text: pCR4-TOPO (InVitrogen)

text: marine metagenome

characteristic: organism

characteristic: ph

text: Bergen Mesocosm May 2006

characteristic: project name

characteristic: relevant standard operating procedures

text: 31.4 practical salinity units

characteristic: salinity

text: Bucket on a string

characteristic: sample collection device or method

text: Whatman GF/A pre-filtration

characteristic: sample material processing

text: marine metagenome

text: Sanger

characteristic: sequencing method

text: salt water

characteristic: substrate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIMARKS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: ENA-STANDARD

text: NEBC

text: public

text: 2154.7 micromols per kilogram

characteristic: alkalinity

text: 9 liter

characteristic: amount or size of sample collected

text: NAST Alignment Tool

characteristic: assembly

text: Mallard 1.02

characteristic: chimera check

text: 2.89 micrograms per liter

characteristic: chlorophyll

characteristic: collection date

text: marine biome, fjord, coastal water, sample ws_192

characteristic: description

text: marine biome, fjord, coastal water

characteristic: environment

text: carbon dioxide

characteristic: experimental factor

text: 0 meters

text: Norway:Raunefjord

characteristic: geographic location (country)

text: 0 meters

characteristic: geographic location (depth)

text: +60.27, +5.22

text: MIMARKS-survey

characteristic: investigation type

text: paired-end

characteristic: library construction method

text: pCR4-TOPO (InVitrogen)

characteristic: library vector

characteristic: nucleic acid extraction

text: marine metagenome

text: Bergen Mesocosm May 2006

text: 31.4 practical salinity units

text: Bucket on a string

text: Whatman GF/A pre-filtration

text: marine metagenome

text: Sanger

text: salt water


characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Salmonella enterica subsp. enterica serovar Typhimurium

characteristic: organism


text: SC

text: public

text: Human_immunodeficiency_virus_1-sc-2010-09-01-273546

text: Human immunodeficiency virus 1

text: Human immunodeficiency virus 1


text: SC

text: public

text: Human_immunodeficiency_virus_1-sc-2010-09-01-273545

text: Human immunodeficiency virus 1

text: Human immunodeficiency virus 1


text: SC

text: public

text: Human_immunodeficiency_virus_1-sc-2010-09-01-273547

text: Human immunodeficiency virus 1

text: Human immunodeficiency virus 1


text: SC

text: public

text: Human_immunodeficiency_virus_1-sc-2010-09-01-273548

text: Human immunodeficiency virus 1

text: Human immunodeficiency virus 1


text: SC

text: public

text: Human_immunodeficiency_virus_1-sc-2010-09-01-273549

text: Human immunodeficiency virus 1

text: Human immunodeficiency virus 1


text: SC

text: public

text: Human_immunodeficiency_virus_1-sc-2010-09-01-273550

text: Human immunodeficiency virus 1

text: Human immunodeficiency virus 1


text: SC

text: public

text: Human_immunodeficiency_virus_1-sc-2010-09-01-273551

text: Human immunodeficiency virus 1

text: Human immunodeficiency virus 1


text: SC

text: public

text: Human_immunodeficiency_virus_1-sc-2010-09-01-273552

text: Human immunodeficiency virus 1

text: Human immunodeficiency virus 1


text: SC

text: public

text: Human_immunodeficiency_virus_1-sc-2010-09-01-273553

text: Human immunodeficiency virus 1

text: Human immunodeficiency virus 1


text: SC

text: public

text: Human_immunodeficiency_virus_1-sc-2010-09-01-273555

text: Human immunodeficiency virus 1

text: Human immunodeficiency virus 1


text: SC

text: public

text: Human_immunodeficiency_virus_1-sc-2010-09-01-273554

text: Human immunodeficiency virus 1

text: Human immunodeficiency virus 1


text: SC

text: public

text: Human_immunodeficiency_virus_1-sc-2010-09-01-273556

text: Human immunodeficiency virus 1

text: Human immunodeficiency virus 1


text: SC

text: public

text: Human_immunodeficiency_virus_1-sc-2010-09-01-273557

text: Human immunodeficiency virus 1

text: Human immunodeficiency virus 1


text: SC

text: public

text: Human_immunodeficiency_virus_1-sc-2010-09-01-273558

text: Human immunodeficiency virus 1

text: Human immunodeficiency virus 1


text: SC

text: public

text: Human_immunodeficiency_virus_1-sc-2010-09-01-273559

text: Human immunodeficiency virus 1

text: Human immunodeficiency virus 1


text: SC

text: public

text: Human_immunodeficiency_virus_1-sc-2010-09-01-273560

text: Human immunodeficiency virus 1

text: Human immunodeficiency virus 1


text: SC

text: public

text: Human_immunodeficiency_virus_1-sc-2010-09-01-273561

text: Human immunodeficiency virus 1

text: Human immunodeficiency virus 1


text: SC

text: public

text: Human_immunodeficiency_virus_1-sc-2010-09-01-273562

text: Human immunodeficiency virus 1

text: Human immunodeficiency virus 1


Redon-WC-May

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIMARKS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: ENA-STANDARD

text: CEAB

text: public

text: Redon-WC-May

unit: meq/L

characteristic: ammonium

unit: ml

characteristic: amount or size of sample collected

text: ENA

characteristic: broker name

characteristic: collection date

text: Water column of Lake Redon

characteristic: description

unit: mg/L

characteristic: dissolved organic carbon

text: Water column of Lake Redon

unit: m amsl

text: Spain:Aiguestortes National Park

unit: m

text: 42.633333, 0.766667

text: miens-survey

characteristic: library reads sequenced

characteristic: library size

text: TOPO TA

characteristic: nitrate

characteristic: nitrite

text: freshwater metagenome

text: 27f:AGA GTT TGA TCM TGG CTC AG;1492r:GGT TAC CTT GTT ACG ACT T

characteristic: pcr primers

text: Niskin bottle

characteristic: sample collection device or method

text: freshwater metagenome

text: Manually

characteristic: sequence quality check

text: Sanger

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

unit: Celsius

characteristic: temperature


Redon-Slush-May

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIMARKS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: ENA-STANDARD

characteristic: External Id

text: CEAB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Redon-Slush-May

characteristic: Submitter Id

text: ENA

text: Slush of Lake Redon

text: Slush of Lake Redon

characteristic: environment

text: Spain:Aiguestortes National Park

characteristic: geographic location (country)

unit: cm

characteristic: geographic location (depth)

text: 42.633333, 0.766667

text: miens-survey

characteristic: investigation type

text: TOPO TA

characteristic: library vector

text: freshwater metagenome

characteristic: organism

text: Manual pump

text: freshwater metagenome

text: Manually

text: Sanger

text: 16S rRNA


Redon-Slush-March

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIMARKS

text: CEAB

text: public

text: Redon-Slush-March

characteristic: ammonium

characteristic: amount or size of sample collected

text: ENA

characteristic: broker name

characteristic: collection date

text: Slush of Lake Redon

characteristic: description

characteristic: dissolved organic carbon

text: Slush of Lake Redon

text: Spain:Aiguestortes National Park

text: 42.633333, 0.766667

text: miens-survey

characteristic: library reads sequenced

characteristic: library size

text: TOPO TA

characteristic: nitrate

characteristic: nitrite

text: freshwater metagenome

characteristic: pcr primers

text: Manual pump

characteristic: sample collection device or method

text: freshwater metagenome

text: Manually

characteristic: sequence quality check

text: Sanger

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

characteristic: temperature


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIMARKS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: ENA-STANDARD

characteristic: External Id

text: MPI BREMEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:MPI BREMEN

characteristic: Submitter Id

unit: liter

text: ENA

text: water

unit: percent

characteristic: dissolved oxygen

text: water

characteristic: environment

text: Italy:Lago di Paola_Latium

characteristic: geographic location (country)

characteristic: geographic location (depth)

text: 41.27, +13.038

text: miens-survey

characteristic: investigation type

text: pGEM-T Easy

characteristic: library vector

text: freshwater metagenome

characteristic: organism

text: Planctomycetes: 275276200 per liter

characteristic: organism count

text: initial denaturation:94degC_4min,denaturation:94degC_1min,annealing:59degC_2min,elongation:72degC_1.5min,extension:72degC_10min,33 cycles

characteristic: pcr conditions

text: Pla46:5'-GGA TTA GGC ATG CAA GTC-3';1392:5'-ACG GGC GGT GTG TAC-3'

characteristic: salinity

text: bottles

text: filtration

characteristic: sample material processing

text: freshwater metagenome

text: manual

text: Sanger

text: 16S rRNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIMARKS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: ENA-STANDARD

characteristic: External Id

text: MPI BREMEN

characteristic: INSDC center name

text: public

characteristic: amount or size of sample collected

text: ENA

characteristic: broker name

characteristic: collection date

text: water

characteristic: description

text: water

text: Italy:Lago di Paola_Latium

unit: meter

text: 41.27, +13.038

text: miens-survey

characteristic: library reads sequenced

characteristic: library size

text: pGEM-T Easy

text: freshwater metagenome

text: Planctomycetes: 355923300 per liter

characteristic: pcr primers

text: bottles

characteristic: sample collection device or method

text: filtration

text: freshwater metagenome

text: manual

characteristic: sequence quality check

text: Sanger

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

characteristic: temperature


Lleb-SML-May

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIMARKS

characteristic: ENA-KEYWORD

text: CEAB

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Lleb-SML-May

characteristic: Submitter Id

unit: moles per litre

characteristic: ammonium

text: ENA

text: Neuston of Lake Llebreta

characteristic: dissolved organic carbon

text: Neuston of Lake Llebreta

characteristic: environment

characteristic: environmental package

text: Spain:Aigestortes National Park

characteristic: geographic location (country)

text: Neuston

characteristic: geographic location (depth)

text: 42.55 N 0.866667 E

text: mimarks-survey

characteristic: investigation type

text: TOPO TA

characteristic: library vector

unit: mm

characteristic: mean annual and seasonal precipitation

characteristic: nitrate

characteristic: nitrite

text: freshwater metagenome

characteristic: organism

text: nylon screen sampler

text: freshwater metagenome

text: manually

text: Sanger

text: 16S rRNA

unit: degrees C


text: B-Lymphocyte

characteristic: ArrayExpress-CellType

text: CTCF

characteristic: ArrayExpress-Immunoprecipitate

text: male

characteristic: ArrayExpress-Sex

text: Homo sapiens

characteristic: ArrayExpress-Species

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens


characteristic: ENA-CHECKLIST

text: GSC, MIxS, MIMARKS

characteristic: ENA-KEYWORD

characteristic: ENA-STANDARD

text: NEBC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 2193.9 micromol per kilogram

characteristic: alkalinity

text: 0.75 liter

characteristic: amount or size of sample collected

text: EMG

characteristic: broker name

text: Bellerophon April 2008

characteristic: chimera check

text: 3.01 micrograms per liter

characteristic: chlorophyll

characteristic: collection date

text: marine biome, fjord, coastal water, sample ws_159. This sampl ehas been used for both 16S and 18S amplicon studies.

characteristic: description

text: marine biome, fjord, coastal water

characteristic: environment

text: carbon dioxide

characteristic: experimental factor

text: 0 meters

text: Norway:Raunefjord

characteristic: geographic location (country)

text: 0 meters

characteristic: geographic location (depth)

text: +60.27, +5.22

text: mimarks-survey

text: mnfr-protocol

characteristic: library construction method

text: pCR4-TOPO (InVitrogen)

characteristic: nucleic acid extraction

text: marine metagenome

characteristic: ph

text: Bergen Mesocosm May 2006

characteristic: project name

characteristic: relevant standard operating procedures

text: 31.5 practical salinity units

characteristic: salinity

text: Bucket on a string

characteristic: sample collection device or method

text: Whatman GF/A pre-filtration

characteristic: sample material processing

text: marine metagenome

text: Sanger

characteristic: sequencing method

text: salt water

characteristic: substrate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIMARKS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: ENA-STANDARD

characteristic: External Id

text: NEBC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 2154.7 micromol per kilogram

characteristic: alkalinity

text: 0.75 liter

characteristic: amount or size of sample collected

text: EMG

characteristic: broker name

text: Bellerophon April 2008

characteristic: chimera check

text: 1.52 micrograms per liter

characteristic: chlorophyll

text: marine biome, fjord, coastal water, sample ws_164. This sampl ehas been used for both 16S and 18S amplicon studies.

text: marine biome, fjord, coastal water

text: carbon dioxide

text: 0 meters

text: Norway:Raunefjord

text: 0 meters

text: +60.27, +5.22

text: mimarks-survey

characteristic: investigation type

text: mnfr-protocol

text: pCR4-TOPO (InVitrogen)

characteristic: library vector

text: marine metagenome

characteristic: organism

text: Bergen Mesocosm May 2006

text: 31.6 practical salinity units

text: Bucket on a string

text: Whatman GF/A pre-filtration

text: marine metagenome

text: Sanger

text: salt water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIMARKS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

text: UH

text: public

text: BioNumerics Assembler

characteristic: assembly

text: ENA

characteristic: collection date

text: sieving of entire greenhouse pot content

characteristic: composite design/sieving (if any)

text: terrestrial biome, anthropogenic habitat, greenhouse soil

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: anthropogenic habitat

characteristic: environment (feature)

text: greenhouse soil

characteristic: environment (material)

text: soil

characteristic: environmental package

text: Veg

characteristic: experimental factor

text: 20 m

text: Finland

characteristic: geographic location (country)

text: 0-20 cm

characteristic: geographic location (depth)

text: N 60.22931829 E 25.02038598

text: miens-survey

text: LH-PCR for peak size 470 bp

characteristic: library screening strategy

characteristic: library size

text: pCR 2.1-TOPO

text: Phusion proofreading polymerase

characteristic: nucleic acid amplification

text: FastDNA SPIN Kit for Soil, Qbiogene

characteristic: nucleic acid extraction

text: soil metagenome

text: fD1:AGAGTTTGATCCTGGCTCAG;PRUN518r:ATTACCGCGGCTGCTGG

characteristic: pcr primers

characteristic: petroleum hydrocarbon

text: destructive sampling

characteristic: sample collection device or method

text: template composite of 6 replicate DNA extractions

characteristic: sample material processing

text: soil metagenome

text: Manual and BioNumerics Assembler

characteristic: sequence quality check

text: Sanger, once both directions with the vector primers

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIMARKS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: ENA-STANDARD

characteristic: External Id

text: UH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: BioNumerics Assembler

characteristic: assembly

text: ENA

characteristic: broker name

characteristic: collection date

characteristic: composite design/sieving (if any)

text: terrestrial biome, anthropogenic habitat, oil contaminated soil

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: anthropogenic habitat

characteristic: environment (feature)

text: oil contaminated soil

text: soil

text: ContVeg

text: 20 m

text: Finland

text: 0-20 cm

text: N 60.22931829 E 25.02038598

text: miens-survey

characteristic: investigation type

text: LH-PCR for peak size 474 bp

text: pCR 2.1-TOPO

characteristic: library vector

text: Phusion proofreading polymerase

text: FastDNA SPIN Kit for Soil, Qbiogene

text: soil metagenome

characteristic: organism

text: 0.3 g/kg soil dw

text: destructive sampling

text: soil metagenome

text: Manual and BioNumerics Assembler

text: 16S rRNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIMARKS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: ENA-STANDARD

characteristic: External Id

text: UH

text: public

text: BioNumerics Assembler

text: ENA

text: terrestrial biome

text: anthropogenic habitat

text: oil contaminated soil

characteristic: environment (material)

text: soil

characteristic: environmental package

text: Cont

characteristic: experimental factor

text: 20 m

text: Finland

characteristic: geographic location (country)

text: 0-20 cm

characteristic: geographic location (depth)

text: N 60.22931829 E 25.02038598

text: miens-survey

text: LH-PCR for peak size 519-522 bp

characteristic: library screening strategy

characteristic: library size

text: pCR 2.1-TOPO

text: Phusion proofreading polymerase

characteristic: nucleic acid amplification

text: FastDNA SPIN Kit for Soil, Qbiogene

characteristic: nucleic acid extraction

text: soil metagenome

characteristic: pcr primers

text: 1.0 g/kg soil dw

characteristic: petroleum hydrocarbon

text: destructive sampling

characteristic: sample collection device or method

characteristic: sample material processing

text: soil metagenome

text: Manual and BioNumerics Assembler

characteristic: sequence quality check

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIMARKS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: ENA-STANDARD

characteristic: External Id

text: UH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: BioNumerics Assembler

characteristic: assembly

text: ENA

characteristic: broker name

characteristic: collection date

characteristic: composite design/sieving (if any)

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: anthropogenic habitat

characteristic: environment (feature)

text: oil contaminated soil

text: soil

text: Cont

text: 20 m

text: Finland

text: 0-20 cm

text: N 60.22931829 E 25.02038598

text: miens-survey

characteristic: investigation type

text: LH-PCR for peak size 474 bp

text: pCR 2.1-TOPO

characteristic: library vector

text: Phusion proofreading polymerase

text: FastDNA SPIN Kit for Soil, Qbiogene

text: soil metagenome

characteristic: organism

text: 0.4 g/kg soil dw

text: destructive sampling

text: soil metagenome

text: Manual and BioNumerics Assembler

text: 16S rRNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIMARKS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: ENA-STANDARD

characteristic: External Id

text: UH

text: public

text: BioNumerics Assembler

text: ENA

text: terrestrial biome

text: anthropogenic habitat

text: oil contaminated soil

characteristic: environment (material)

text: soil

characteristic: environmental package

text: ContVeg and Cont

characteristic: experimental factor

text: 20 m

text: Finland

characteristic: geographic location (country)

text: 0-20 cm

characteristic: geographic location (depth)

text: N 60.22931829 E 25.02038598

text: miens-survey

text: LH-PCR for peak size 519-522 bp

characteristic: library screening strategy

characteristic: library size

text: pCR 2.1-TOPO

text: Phusion proofreading polymerase

characteristic: nucleic acid amplification

text: FastDNA SPIN Kit for Soil, Qbiogene

characteristic: nucleic acid extraction

text: soil metagenome

characteristic: pcr primers

text: 1.0 g/kg soil dw

characteristic: petroleum hydrocarbon

text: destructive sampling

characteristic: sample collection device or method

characteristic: sample material processing

text: soil metagenome

text: Manual and BioNumerics Assembler

characteristic: sequence quality check

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene


text: male

characteristic: ArrayExpress-Sex

text: Homo Sapien

characteristic: ArrayExpress-Species

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: GIH5193742-sc-2011-07-19T14:47:02Z-1240437

characteristic: Submitter Id

text: human

characteristic: common name

text: Homo sapiens

characteristic: organism

text: Homo sapiens


text: female

text: Homo Sapien

text: SC

text: public

text: GIH5193750-sc-2011-07-19T14:47:08Z-1240445

text: human

text: Homo sapiens

text: Homo sapiens


text: female

text: Homo Sapien

text: SC

text: public

text: GIH5193752-sc-2011-07-19T14:47:09Z-1240447

text: human

text: Homo sapiens

text: Homo sapiens


characteristic: ENA-CHECKLIST

text: GSC, MIxS, MIMARKS

characteristic: ENA-KEYWORD

characteristic: ENA-STANDARD

text: CEAB

text: public

characteristic: ammonium

text: 1000 ml

characteristic: amount or size of sample collected

text: Small lake biome

characteristic: biome

text: ENA

characteristic: broker name

characteristic: collection date

text: Lake Redon

characteristic: description

characteristic: dissolved organic carbon

characteristic: environmental package

text: freshwater habitat

characteristic: feature

text: Spain:Limnological Observatory of the Pyrenees, LOOP, NE Spain

characteristic: geographic location (country)

text: 60 m

characteristic: geographic location (depth)

text: 42.63 N 00.77 E

text: miens-survey

characteristic: investigation type

characteristic: library reads sequenced

characteristic: library size

text: TOPO TA

characteristic: library vector

text: oligotrophic water

characteristic: material

characteristic: nitrate

characteristic: nitrite

text: uncultured archaeon

text: 21f:TTC CGG TTG ATC CYG CCG GA;958r:YCC GGC GTT GAM TCC AAT T

characteristic: pcr primers

text: PYRENA

characteristic: project name

text: Niskin bottle

characteristic: sample collection device or method

text: uncultured archaeon

text: manually

text: Sanger

text: 16S rRNA

characteristic: temperature


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIMARKS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: ENA-STANDARD

characteristic: External Id

text: CEAB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: ammonium

text: 1000 mL

characteristic: amount or size of sample collected

text: Small lake biome

characteristic: biome

text: ENA

characteristic: broker name

characteristic: collection date

text: Lake Redon

characteristic: description

text: freshwater habitat

text: 20 m

text: 42.63 N 00.77 E

text: miens-survey

text: TOPO TA

text: oligotrophic water

text: uncultured archaeon

characteristic: organism

text: PYRENA

text: Niskin bottle

text: uncultured archaeon

text: manually

characteristic: sequence quality check

text: Sanger

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene


Redon-Slush-April

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIMARKS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: ENA-STANDARD

characteristic: External Id

text: CEAB

text: public

text: Redon-Slush-April

text: 1000 ml

text: Small lake biome

text: ENA

text: Lake Redon

characteristic: dissolved organic carbon

characteristic: environmental package

text: freshwater habitat

characteristic: feature

characteristic: geographic location (country)

text: Slush

characteristic: geographic location (depth)

text: 42.63 N 00.77 E

text: miens-survey

characteristic: investigation type

characteristic: library reads sequenced

characteristic: library size

text: TOPO TA

characteristic: library vector

text: oligotrophic water

characteristic: material

characteristic: nitrate

characteristic: nitrite

text: uncultured archaeon

characteristic: pcr primers

text: PYRENA

characteristic: project name

text: Sterile pumping device

characteristic: sample collection device or method

text: uncultured archaeon

text: manually

text: Sanger

text: 16S rRNA

characteristic: temperature


Redon-SML-Sep

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIMARKS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: ENA-STANDARD

characteristic: External Id

text: CEAB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Redon-SML-Sep

characteristic: Submitter Id

characteristic: ammonium

text: 250 mL

characteristic: amount or size of sample collected

text: Small lake biome

characteristic: biome

text: ENA

characteristic: broker name

characteristic: collection date

text: Lake Redon

characteristic: description

text: freshwater habitat

text: Surface micro layer (SML)

text: 42.63 N 00.77 E

text: miens-survey

text: TOPO TA

text: oligotrophic water

text: uncultured archaeon

characteristic: organism

text: PYRENA

text: nylon screen sampler

text: uncultured archaeon

text: manually

characteristic: sequence quality check

text: Sanger

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIMARKS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: ENA-STANDARD

characteristic: External Id

text: CEAB

text: public

text: 250 mL

text: Small lake biome

text: ENA

text: Lake Redon

characteristic: dissolved organic carbon

characteristic: environmental package

text: freshwater habitat

characteristic: feature

characteristic: geographic location (country)

text: 60 m

characteristic: geographic location (depth)

text: 42.63 N 00.77 E

text: miens-survey

characteristic: investigation type

characteristic: library reads sequenced

characteristic: library size

text: TOPO TA

characteristic: library vector

text: oligotrophic water

characteristic: material

characteristic: nitrate

characteristic: nitrite

text: uncultured archaeon

characteristic: pcr primers

text: PYRENA

characteristic: project name

text: Niskin bottle

characteristic: sample collection device or method

text: uncultured archaeon

text: manually

text: Sanger

text: 16S rRNA

characteristic: temperature


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIMARKS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: ENA-STANDARD

characteristic: External Id

text: CEAB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: ammonium

text: 250 mL

characteristic: amount or size of sample collected

text: Small lake biome

characteristic: biome

text: ENA

characteristic: broker name

characteristic: collection date

text: Lake Redon

characteristic: description

text: freshwater habitat

text: 20 m

text: 42.63 N 00.77 E

text: miens-survey

text: TOPO TA

text: oligotrophic water

text: uncultured archaeon

characteristic: organism

text: PYRENA

text: Niskin bottle

text: uncultured archaeon

text: manually

characteristic: sequence quality check

text: Sanger

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene


text: Homo sapiens

characteristic: ArrayExpress-Species

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: GM12155i_71-sc-2011-09-30T11:53:10Z-1283447

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens


text: Homo sapiens

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: GM12872i_72-sc-2011-09-30T11:53:11Z-1283448

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo sapiens

text: SC

text: public

text: GM12891B2_69-sc-2011-09-30T11:53:08Z-1283445

characteristic: Submitter Id

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo sapiens

text: SC

text: public

text: GM12892B1_70-sc-2011-09-30T11:53:09Z-1283446

text: human

text: Homo sapiens

text: Homo sapiens


WT IFNg 6 hours

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

text: HU-MCB

text: public

text: WT IFNg 6 hours

text: house mouse

text: WT IFNg 6 hours

text: Mus musculus

text: Mus musculus

text: WT IFNg 6 hours

characteristic: title


WT untreated

text: SRA-Webin

text: HU-MCB

text: public

text: WT untreated

text: house mouse

text: WT untreated

characteristic: description

text: Mus musculus

characteristic: organism

text: Mus musculus

text: WT untreated


KO IFNb 6 hours

text: SRA-Webin

text: HU-MCB

text: public

text: KO IFNb 6 hours

text: house mouse

text: KO IFNb 6 hours

text: Mus musculus

text: Mus musculus

text: KO IFNb 6 hours


KO untreated

text: SRA-Webin

text: HU-MCB

text: public

text: KO untreated

text: house mouse

text: KO untreated

text: Mus musculus

text: Mus musculus

text: KO untreated


KO IFNg 6 hours

text: SRA-Webin

text: HU-MCB

text: public

text: KO IFNg 6 hours

text: house mouse

text: KO IFNg 6 hours

text: Mus musculus

text: Mus musculus

text: KO IFNg 6 hours


WT IFNb 6 hours

text: SRA-Webin

text: HU-MCB

text: public

text: WT IFNb 6 hours

text: house mouse

text: WT IFNb 6 hours

text: Mus musculus

text: Mus musculus

text: WT IFNb 6 hours


SHR/OlaIpcv

text: SRA-Webin

text: ICL-MRC

text: public

text: SHR/OlaIpcv

text: Norway rat

text: strain:SHR/OlaIpcv; tissue:liver

text: Rattus norvegicus

text: Rattus norvegicus

text: SHR genome sequence


text: SRA-Webin

text: BGI-SHENZHEN

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: human


status: KILLED

text: Alien

characteristic: Common name

text: EBI

text: killed

text: Bornean orangutan

text: DNA extracted from a pale-green scale found in the debries of the Roswell UFO crush in 1947.

text: Pongo pygmaeus

text: Pongo pygmaeus


text: ES cell

characteristic: ArrayExpress-CellType

text: WT

characteristic: ArrayExpress-Genotype

text: male

characteristic: ArrayExpress-Sex

text: mus musculus

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: A_JM8_RNA-sc-2013-01-28T14:06:22Z-1317439

text: house mouse

text: Mus musculus

text: Micro RNA

characteristic: sample description

text: Mus musculus

characteristic: strain


text: ES cell

text: Hemizygous

text: male

text: mus musculus

characteristic: ArrayExpress-Species

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: D_DreF7_RNA-sc-2013-01-28T14:06:26Z-1317442

text: house mouse

characteristic: common name

text: Mus musculus

text: Micro RNA

text: Mus musculus


text: ES cell

text: Hemizygous

text: male

text: mus musculus

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: C_4D5_A1_RNA-sc-2013-01-28T14:06:25Z-1317441

characteristic: Submitter Id

text: house mouse

text: Mus musculus

text: Micro RNA

text: Mus musculus


text: ES cell

characteristic: ArrayExpress-CellType

text: Hemizygous

text: male

text: mus musculus

text: SC

text: public

text: B_4D5_A1_RNA-sc-2013-01-28T14:06:24Z-1317440

text: house mouse

text: Mus musculus

characteristic: organism

text: Micro RNA

text: Mus musculus


text: ES cell

text: Hemizygous

characteristic: ArrayExpress-Genotype

text: male

characteristic: ArrayExpress-Sex

text: mus musculus

text: SC

text: public

text: E_4D5_D2_CrePool_FF_RNA-sc-2013-01-28T14:06:27Z-1317443

text: house mouse

text: Mus musculus

text: Micro RNA

text: Mus musculus


text: ES cell

text: Hemizygous

text: male

text: mus musculus

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: F_4D5_A1_Cre_RNA-sc-2013-01-28T14:06:28Z-1317444

text: house mouse

text: Mus musculus

text: Micro RNA

characteristic: sample description

text: Mus musculus


text: ES cell

text: Hemizygous

text: male

text: mus musculus

characteristic: ArrayExpress-Species

text: SC

text: public

text: G_4D5_A1Puro_A__RNA-sc-2013-01-28T14:06:29Z-1317445

text: house mouse

text: Mus musculus

text: Micro RNA

text: Mus musculus

characteristic: strain


text: ES cell

text: Hemizygous

text: male

text: mus musculus

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: H_Max2_12DreF7_RNA-sc-2013-01-28T14:06:31Z-1317446

text: house mouse

text: Mus musculus

text: Micro RNA

text: Mus musculus


text: ES cell

text: Hemizygous

text: male

text: mus musculus

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: I_MAxDre_H11_RNA-sc-2013-01-28T14:06:32Z-1317447

text: house mouse

text: Mus musculus

text: Micro RNA

text: Mus musculus


text: ES cell

text: Hemizygous

text: male

text: mus musculus

text: SC

characteristic: INSDC first public

text: public

text: J_4D5_A1Puro_B__RNA-sc-2013-01-28T14:06:33Z-1317448

text: house mouse

characteristic: common name

text: Mus musculus

text: Micro RNA

text: Mus musculus


text: ES cell

text: WT

text: male

text: mus musculus

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: K_4D5_A1_A__Cred_RNA-sc-2013-01-28T14:06:35Z-1317449

text: house mouse

text: Mus musculus

text: Micro RNA

text: Mus musculus


text: male

text: mus musculus

text: SC

text: public

characteristic: SRA accession

text: L_JM8_A3_A3_RNA-sc-2013-01-28T14:06:36Z-1317450

characteristic: Submitter Id

text: house mouse

text: Mus musculus

text: Micro RNA

text: Mus musculus


text: Organism: Macaca mulatta

characteristic: Experimental Factor: ORGANISM

text: OrganismPart: liver

characteristic: Experimental Factor: ORGANISMPART

text: CRUK-CRI

text: public

text: ArrayExpress

characteristic: broker name

text: Rhesus monkey

text: adult

characteristic: developmental stage

text: mmlblues

characteristic: individual

text: Macaca mulatta

characteristic: organism

text: Macaca mulatta

text: liver

characteristic: organism part

text: Macaca mulatta

text: male

characteristic: sex


Runx1 non-induced

text: BCCS

text: public

text: Runx1 non-induced

text: house mouse

text: Mouse ErythroLeukaemic (MEL) cell lines were maintained in DMEM supplemented with 10% fetal calf serum and penicillin/streptomycin. V5-Bio or V5-Flag-Bio tagged as described in Optimal use of tandem biotin and V5 tags in ChIP assays, BMC Kolodziej et al. Mol Biol 2009 and A systems approach to analyze transcription factors in mammalian cells, Soler et al. Methods in press 2009.

characteristic: description

text: Mus musculus

text: Mus musculus


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

characteristic: collection date

characteristic: collection month

text: Netherlands

characteristic: geographic location (country and/or sea)

text: disease

characteristic: host health state

text: not known

characteristic: isolation source

text: Mycobacterium tuberculosis

characteristic: pmid

text: Mycobacterium tuberculosis

characteristic: scientific name

text: Mycobacterium tuberculosis

text: human

characteristic: specific host

characteristic: strain

characteristic: tax id

text: Mycobacterium tuberculosis; Mycobacterium tuberculosis

characteristic: title


text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Netherlands: Amsterdam

text: disease

text: not known

text: Mycobacterium tuberculosis

characteristic: organism

text: Amsterdam

characteristic: region

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: human


characteristic: Bone ID

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPI-EVA

text: public

text: DNA extracted from fossilised bone of Vindija Neandertal individual Vi33.25

characteristic: description

text: fossil metagenome

text: fossil metagenome

text: Female

characteristic: sex

type: has member


text: MPI-EVA

text: public

text: DNA extracted from fossilised bone of Feldhofer Neandertal individual Feld1

text: fossil metagenome

text: fossil metagenome


characteristic: CEPH-HGDP sample ID

text: MPI-EVA

text: public

text: human

characteristic: common name

text: Human CEPH-HGDP individual HGDP00881

text: Russia

characteristic: geographic location (country)

text: Homo sapiens

text: Russian

characteristic: population

text: Homo sapiens


text: MPI-EVA

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: human

text: Human CEPH-HGDP individual HGDP00667

text: Italy

text: Homo sapiens

text: Sardinian

text: Homo sapiens


text: MPI-EVA

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: human

text: Human CEPH-HGDP individual HGDP01156

text: Italy

text: Homo sapiens

text: North Italian

text: Homo sapiens


text: MPI-EVA

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: human

text: Human CEPH-HGDP individual HGDP00336

text: Pakistan

text: Homo sapiens

text: Burusho

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: Human CEPH-HGDP individual HGDP01345

text: China

text: Homo sapiens

characteristic: organism

text: Naxi

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: Human CEPH-HGDP individual HGDP01168

text: Italy

text: Homo sapiens

text: Tuscan

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: Human CEPH-HGDP individual HGDP01305

text: China

text: Homo sapiens

text: Uygur

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: Human CEPH-HGDP individual HGDP00607

text: Israel

text: Homo sapiens

text: Bedouin

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: Human CEPH-HGDP individual HGDP00513

text: France

text: Homo sapiens

text: French

text: Homo sapiens


text: Plasmodium falciparum

characteristic: ArrayExpress-Species

text: SC

text: public

text: malaria parasite P. falciparum

text: Plasmodium falciparum

text: TRAC samples Dec 2012 2

characteristic: sample description

text: Plasmodium falciparum


text: Plasmodium falciparum

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: malaria parasite P. falciparum

text: Plasmodium falciparum

text: TRAC samples Dec 2012 1

text: Plasmodium falciparum


text: Plasmodium falciparum

characteristic: External Id

text: SC

text: public

text: malaria parasite P. falciparum

text: Plasmodium falciparum

text: TRAC samples Dec 2012 3

text: Plasmodium falciparum


text: Plasmodium falciparum

text: SC

text: public

text: malaria parasite P. falciparum

text: Plasmodium falciparum

text: 9 TRAC plus 3 old samples 500ng

text: Plasmodium falciparum


text: Plasmodium falciparum

text: SC

text: public

text: malaria parasite P. falciparum

text: Plasmodium falciparum

text: Harold PT and Conway PF nov 2012

text: Plasmodium falciparum


text: Plasmodium falciparum

text: SC

text: public

text: malaria parasite P. falciparum

text: Plasmodium falciparum

text: TRAC 500ng and 4 urgent bergei

text: Plasmodium falciparum


text: Plasmodium falciparum

text: SC

text: public

text: malaria parasite P. falciparum

text: Plasmodium falciparum

text: Harold PT nov 2012 2

text: Plasmodium falciparum


text: Plasmodium falciparum

text: SC

text: public

text: malaria parasite P. falciparum

text: Plasmodium falciparum

text: Harold PT nov 2012 1

text: Plasmodium falciparum


text: Plasmodium falciparum

text: SC

text: public

text: malaria parasite P. falciparum

text: Plasmodium falciparum

text: TRAC samples Dec 2012 5

text: Plasmodium falciparum


text: Plasmodium falciparum

text: SC

text: public

text: malaria parasite P. falciparum

text: Plasmodium falciparum

text: TRAC samples Dec 2012 4

text: Plasmodium falciparum


text: SC

text: public

text: malaria parasite P. falciparum

text: Plasmodium falciparum

text: Plasmodium falciparum


text: female

characteristic: ArrayExpress-Sex

text: Mus musculus

text: SC

text: public

text: LP_40kb_1-sc-2012-10-31T14:15:46Z-1505634

text: house mouse

text: Mus musculus

text: Mus musculus


text: female

text: Mus musculus

text: SC

text: public

text: DBA_40kb_N3-sc-2012-10-09T15:10:46Z-1494527

text: house mouse

text: Mus musculus

text: Mus musculus


text: female

text: Mus musculus

text: SC

text: public

text: C57BL6N_40kb_N3-sc-2012-10-09T15:06:21Z-1494533

text: house mouse

text: Mus musculus

text: Mus musculus


text: female

text: Mus musculus

text: SC

text: public

text: C57BL6N_40kb_N2-sc-2012-10-09T15:06:16Z-1494532

text: house mouse

text: Mus musculus

text: Mus musculus


text: female

text: Mus musculus

text: SC

text: public

text: DBA_40kb_N2-sc-2012-10-09T15:05:48Z-1494526

text: house mouse

text: Mus musculus

text: Mus musculus


text: female

text: Mus musculus

text: SC

text: public

text: C3H_40kb_N2-sc-2012-10-09T15:06:11Z-1494531

text: house mouse

text: Mus musculus

text: Mus musculus


text: female

text: Mus musculus

text: SC

text: public

text: C3H_40kb_N1-sc-2012-10-09T15:10:52Z-1494530

text: house mouse

text: Mus musculus

text: Mus musculus


text: adult

characteristic: ArrayExpress-DevelopmentalStage

text: whole organism

characteristic: ArrayExpress-OrganismPart

text: mixed

text: Haemonchus contortus

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: Haemonchus_contortus-sc-2013-02-12T18:14:49Z-1566141

text: barber pole worm

text: Haemonchus contortus

text: Haemonchus contortus genomic DNA (pooled adults)

text: Haemonchus contortus

characteristic: strain


text: adult

text: whole organism

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text: Haemonchus contortus

text: SC

characteristic: INSDC center name

text: public

text: Haemonchus_contortus-sc-2013-02-12T18:14:18Z-1566140

text: barber pole worm

characteristic: common name

text: Haemonchus contortus

text: Haemonchus contortus


text: adult

text: whole organism

text: mixed

text: Haemonchus contortus

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Haemonchus_contortus-sc-2013-02-12T18:16:12Z-1566143

text: barber pole worm

text: Haemonchus contortus

text: Haemonchus contortus


text: adult

text: whole organism

text: mixed

text: Haemonchus contortus

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Haemonchus_contortus-sc-2013-02-12T18:13:38Z-1566139

text: barber pole worm

text: Haemonchus contortus

text: Haemonchus contortus


text: adult

text: whole organism

text: mixed

text: Haemonchus contortus

text: SC

text: public

text: Haemonchus_contortus-sc-2013-02-12T18:15:42Z-1566142

characteristic: Submitter Id

text: barber pole worm

text: Haemonchus contortus

characteristic: organism

text: Haemonchus contortus


text: Homo Sapien

characteristic: ArrayExpress-Species

text: SC

text: public

text: WI2_2880N19-sc-2012-11-07T08:41:20Z-1499270

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: ABC9_44023300E6-sc-2012-11-07T08:40:50Z-1499236

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: ABC8_43023900K12-sc-2012-11-07T08:41:44Z-1499296

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

characteristic: External Id

text: SC

text: public

text: ABC8_5698149H10-sc-2012-11-07T08:42:02Z-1499313

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: WI2_682F18-sc-2012-11-07T08:41:43Z-1499295

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: ABC7_43046700E7-sc-2012-11-07T08:41:59Z-1499310

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: CH17_O268J22-sc-2012-11-07T08:41:24Z-1499275

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: ABC8_42663600F2-sc-2012-11-07T08:40:49Z-1499235

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: CH17_O61I6-sc-2012-11-07T08:41:30Z-1499281

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: ABC7_42506100J21-sc-2012-11-07T08:41:06Z-1499254

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: f14A50077400H20-sc-2012-11-07T08:41:49Z-1499302

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: WI2_3238K12-sc-2012-11-07T08:41:02Z-1499250

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: ABC9_41267100A18-sc-2012-11-07T08:42:12Z-1499323

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: CH17_O181I5-sc-2012-11-07T08:41:22Z-1499273

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: CH17_O376G3-sc-2012-11-07T08:41:19Z-1499269

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: WI2_3780D20-sc-2012-11-07T08:41:00Z-1499249

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: CH17_O206G12-sc-2012-11-07T08:41:07Z-1499255

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: ABC7_43045400L9-sc-2012-11-07T08:41:45Z-1499297

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: ABC9_45919000E9-sc-2012-11-07T08:40:48Z-1499234

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: CH17_O273M14-sc-2012-11-07T08:42:13Z-1499324

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: CH17_O406B19-sc-2012-11-07T08:41:48Z-1499301

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: ABC8_41130400O23-sc-2012-11-07T08:42:04Z-1499314

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: RP11_452G11-sc-2012-11-07T08:41:24Z-1499274

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: CH17_O160K14-sc-2012-11-07T08:41:18Z-1499268

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: WI2_2230D19-sc-2012-11-07T08:40:54Z-1499241

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: ABC7_42445500E1-sc-2012-11-07T08:41:31Z-1499282

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: CH17_O258P2-sc-2012-11-07T08:40:51Z-1499238

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: ABC8_43203200G21-sc-2012-11-07T08:41:54Z-1499304

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: CH17_O316P2-sc-2012-11-07T08:41:08Z-1499256

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: CH17_O376G4-sc-2012-11-07T08:41:26Z-1499277

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: CH17_O281G15-sc-2012-11-07T08:41:00Z-1499248

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: ABC8_5715949F19-sc-2012-11-07T08:42:04Z-1499315

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: CH17_O269P14-sc-2012-11-07T08:41:32Z-1499283

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: CH17_O399J13-sc-2012-11-07T08:41:41Z-1499293

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: CH17_O265E22-sc-2012-11-07T08:41:18Z-1499267

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: RP11_1083I3-sc-2012-11-07T08:41:53Z-1499303

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: ABC9_41287500C5-sc-2012-11-07T08:42:10Z-1499321

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: CH17_O321J16-sc-2012-11-07T08:40:59Z-1499247

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: CH17_O380L2-sc-2012-11-07T08:41:34Z-1499285

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: CH17_O279F17-sc-2012-11-07T08:40:50Z-1499237

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: RP11_429I5-sc-2012-11-07T08:41:09Z-1499257

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: CH17_O190J7-sc-2012-11-07T08:41:32Z-1499284

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: ABC7_610122F8-sc-2012-11-07T08:41:09Z-1499258

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: f11A47310900L22-sc-2012-11-07T08:41:42Z-1499294

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: CH17_O181P2-sc-2012-11-07T08:41:25Z-1499276

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: ABC8_41198000G13-sc-2012-11-07T08:41:16Z-1499266

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: CH17_O429A22-sc-2012-11-07T08:40:58Z-1499246

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: CH17_O254G7-sc-2012-11-07T08:42:06Z-1499316

text: human

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text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: ABC8_42534600I5-sc-2012-11-07T08:42:11Z-1499322

text: human

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text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: CH17_O159G3-sc-2012-11-07T08:41:11Z-1499260

text: human

text: Homo sapiens

text: Homo sapiens


text: Homo Sapien

text: SC

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text: human

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text: Homo sapiens


text: Homo Sapien

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text: human

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text: Homo sapiens


text: Homo Sapien

text: SC

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text: human

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text: Homo sapiens


text: Homo Sapien

text: SC

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text: CH17_O224F16-sc-2012-11-07T08:41:47Z-1499300

text: human

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text: Homo sapiens


text: Homo Sapien

text: SC

text: public

text: CH17_O463M7-sc-2012-11-07T08:41:39Z-1499291

text: human

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text: Homo sapiens


text: Homo Sapien

text: SC

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text: human

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text: Homo sapiens


text: Homo Sapien

text: SC

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text: human

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text: Homo sapiens


text: Homo Sapien

text: SC

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text: human

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text: Homo sapiens


text: Homo Sapien

text: SC

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text: Homo sapiens


text: Homo Sapien

text: SC

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text: human

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text: Homo sapiens


text: Homo Sapien

text: SC

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text: Homo sapiens


text: Homo Sapien

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text: human

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text: Homo sapiens


text: Homo Sapien

text: SC

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text: human

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text: Homo sapiens


text: Homo Sapien

text: SC

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text: Homo sapiens


text: Homo Sapien

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text: Homo sapiens


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text: human

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text: Homo sapiens


text: Homo Sapien

text: SC

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text: human

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text: Homo sapiens


text: Homo Sapien

text: SC

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text: human

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text: Homo sapiens


text: Homo Sapien

text: SC

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text: Homo sapiens


text: Homo Sapien

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text: human

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text: Homo sapiens


text: Homo Sapien

text: SC

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text: Homo sapiens


text: Homo Sapien

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text: Homo sapiens


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text: Homo Sapien

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text: human

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text: Homo sapiens


text: Homo Sapien

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text: SC

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text: human

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text: Homo sapiens


text: Homo Sapien

text: SC

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text: human

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text: Homo sapiens


text: Homo Sapien

text: SC

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text: human

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text: Homo Sapien

text: SC

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text: human

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text: Homo sapiens


text: Homo Sapien

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text: 29358649; 31736907; 33075053; 33347430; 34461978; 35780211

text: SC

text: public

text: MWI

characteristic: anonymized name

characteristic: collection date

text: Mycobacterium

characteristic: genus

text: Malawi

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: host

text: disease:tuberculosis

characteristic: host health state

characteristic: isolate

text: sputum

characteristic: isolation source

text: respiratory tract

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Human

characteristic: specific host

characteristic: title

type: AMR curated data - CABBAGE

value: isoniazid

value: broth dilution

value: susceptible

value: Mycobacterium tuberculosis

value: rifampin