text: Karolinska Institutet Department of Biosciences and Nutrition

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: 21 day

text: ArrayExpress

text: Lgr6-negative basal interfollicular epidermis cell

characteristic: cell type

text: house mouse

characteristic: common name

text: Lgr6cre-EGFP-IRES-CreERT2 heterozygous

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: dorsal skin

text: CD49f hi/Sca1 hi/EGFP neg

text: Mus musculus

text: male

characteristic: strain

characteristic: title


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Karolinska Institutet Department of Biosciences and Nutrition

characteristic: Submitter Id

text: 21 day

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Lgr6-positive basal interfollicular epidermis cell

text: house mouse

text: Protocols: Keratinocytes were isolated from three-week-old Lgr6-EGFP-CreETR2 mice as described previously (Jaks et al., 2008). Briefly, dorsal skin was harvested, cut in strips and digested in trypsin. Epidermal cells were peeled off the dermis and singularized by magnetic stirring. Cells from 2 - 3 mice were pooled per experiment. The collected cells were stained with AlexaFluor647-conjugated anti-CD49f antibody and PE-Cy7-conjugated anti-Sca-1 antibody (both from BD Biosciences), and filtered before sorting. Keratinocytes stained for CD49f, Sca-1 and 7-AAD were live sorted using a FACSAria (BD). Lgr6+ IFE cells were defined as the CD49fhigh, Sca-1high and EGFPhigh fraction. Lgr6+ HF cells were defined as the CD49fhigh+dim, Sca-1neg and EGFPhigh fraction. One hundred thousand cells were collected for each population. RNA was isolated from sorted keratinocytes by combining the RNA-containing aqueous phase extract using RNA-Bee (Amsbio) with the RNAaqueous-Micro Kit (Ambion). RNA integrity was measured using an Agilent 2100 Bioanalyzer Pico Chip or a 2200 TapeStation High Sensitivity R6K Screen Tape. The RNA integrity number of the used samples was higher than 8.5. The sequencing library was generated according to the STRT protocol, described in (Islam et al., 2012), using 1 ng total RNA as input for each sample. For each sample two technical replicates were sequenced (suffix _1 and _2). Islam, S., Kjällquist, U., Moliner, A., Zajac, P., Fan, J.B., Lönnerberg, P. and Linnarsson, S. (2012). Highly multiplexed and strand-specific single-cell RNA 5' end sequencing. Nat Protoc 7, 813-828.

characteristic: description

text: Lgr6cre-EGFP-IRES-CreERT2 heterozygous

text: Mus musculus

characteristic: organism

text: Mus musculus

text: dorsal skin

characteristic: organism part

text: CD49f hi/Sca1 hi/EGFP hi

characteristic: phenotype

text: Mus musculus

text: male

characteristic: sex

type: has member


characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: 21 day

text: ArrayExpress

text: Lgr6-negative hair follicle/sebaceous gland cell

characteristic: cell type

text: house mouse

characteristic: common name

text: Lgr6cre-EGFP-IRES-CreERT2 heterozygous

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: dorsal skin

text: CD49f hi/Sca1 neg/EGFP neg

text: Mus musculus

text: male

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: 21 day

text: ArrayExpress

text: Lgr6-positive hair follicle/sebaceous gland cell

text: house mouse

text: Lgr6cre-EGFP-IRES-CreERT2 heterozygous

text: Mus musculus

text: Mus musculus

text: dorsal skin

text: CD49f hi+dim/Sca1 neg/EGFP hi

text: Mus musculus

text: male

characteristic: title


text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 21 day

characteristic: age

text: ArrayExpress

characteristic: broker name

text: basal keratinocytes

text: house mouse

characteristic: description

text: Lgr6cre-EGFP-IRES-CreERT2 heterozygous

text: Mus musculus

text: Mus musculus

text: dorsal skin

text: CD49f hi+dim

text: Mus musculus

text: male


characteristic: ArrayExpress-CellType

text: RPMI1640_10% HiFBS_1% L-glut

characteristic: ArrayExpress-GrowthCondition

text: Homo Sapien

characteristic: ArrayExpress-Species

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: human

text: Homo sapiens

characteristic: organism

text: K562 RNA

characteristic: sample description

text: Homo sapiens


text: Segmentation:26+ somites ZFS:0000028 - Pharyngula:Prim-5 ZFS:0000029

characteristic: ArrayExpress-DevelopmentalStage

text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: zebrafish

characteristic: common name

text: Danio rerio

text: 3' end enriched mRNA from a single embryo homozygous for pcna, allele sa8962 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TGCGATCT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph175.

text: Danio rerio


text: Whole embryo

text: Danio rerio

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single embryo homozygous for pcna, allele sa8962 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TTCCTGCT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph175.

text: Danio rerio


text: Whole embryo

text: Danio rerio

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single embryo homozygous for pcna, allele sa8962 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TAGTGACT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph175.

text: Danio rerio


text: Whole embryo

text: Danio rerio

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single embryo homozygous for pcna, allele sa8962 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TACAGGAT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph175.

text: Danio rerio


text: Whole embryo

text: Danio rerio

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single embryo homozygous for pcna, allele sa8962 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TCCTCAAT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph175.

text: Danio rerio


text: Whole embryo

text: Danio rerio

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single embryo homozygous for pcna, allele sa8962 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TGTGGTTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph175.

text: Danio rerio


text: Whole embryo

text: Danio rerio

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single embryo homozygous for pcna, allele sa8962 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TAGTCTTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph175.

text: Danio rerio


text: Whole embryo

text: Danio rerio

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single embryo homozygous for pcna, allele sa8962 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TTCCATTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph175.

text: Danio rerio


text: Whole embryo

text: Danio rerio

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single embryo homozygous for pcna, allele sa8962 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TCGAAGTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph175.

text: Danio rerio


text: Whole embryo

text: Danio rerio

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single embryo homozygous for pcna, allele sa8962 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TAACGCTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph175.

text: Danio rerio


text: Whole embryo

text: Danio rerio

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single embryo homozygous for pcna, allele sa8962 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TTGGTATG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph175.

text: Danio rerio


text: Whole embryo

text: Danio rerio

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single embryo homozygous for pcna, allele sa8962 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TGAACTGG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph175.

text: Danio rerio


text: Whole embryo

text: Danio rerio

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single embryo heterozygous for pcna, allele sa8962 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TACTTCGG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph175.

text: Danio rerio


text: Whole embryo

text: Danio rerio

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single embryo heterozygous for pcna, allele sa8962 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TCTCACGG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph175.

text: Danio rerio


text: Whole embryo

text: Danio rerio

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single embryo heterozygous for pcna, allele sa8962 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TCAGGAGG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph175.

text: Danio rerio


text: Whole embryo

text: Danio rerio

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single embryo heterozygous for pcna, allele sa8962 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TAAGTTCG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph175.

text: Danio rerio


text: Segmentation:26+ somites ZFS:0000028 - Pharyngula:Prim-5 ZFS:0000029

text: Whole embryo

text: Danio rerio

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single embryo heterozygous for pcna, allele sa8962 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TCCAGTCG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph175.

text: Danio rerio


text: Whole embryo

text: Danio rerio

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single embryo heterozygous for pcna, allele sa8962 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TGTATGCG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph175.

text: Danio rerio


text: Whole embryo

text: Danio rerio

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single embryo wild type for pcna, allele sa8962 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TCATTGAG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph175.

text: Danio rerio


text: Whole embryo

text: Danio rerio

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single embryo wild type for pcna, allele sa8962 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TGGCTCAG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph175.

text: Danio rerio


text: Whole embryo

text: Danio rerio

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single embryo wild type for pcna, allele sa8962 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TATGCCAG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph175.

text: Danio rerio


text: Whole embryo

text: Danio rerio

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single embryo wild type for pcna, allele sa8962 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TCAGATTC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph175.

text: Danio rerio


text: Whole embryo

text: Danio rerio

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single embryo wild type for pcna, allele sa8962 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TACTAGTC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph175.

text: Danio rerio


text: Whole embryo

text: Danio rerio

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single embryo wild type for pcna, allele sa8962 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TTCAGCTC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph175.

text: Danio rerio


characteristic: ArrayExpress-CellType

text: RPMI1640_10% FBS

characteristic: ArrayExpress-GrowthCondition

text: Homo Sapien

text: SC

text: public

text: human

text: Homo sapiens

text: KU812 RNA

text: Homo sapiens


text: RPMI1640_10% FBS_1% Glutamax_1% sodium pyruvate

text: Homo Sapien

characteristic: ArrayExpress-Species

text: SC

characteristic: INSDC first public

text: public

text: human

text: Homo sapiens

text: Meg01 RNA

text: Homo sapiens


text: RPMI1640_10% HiFBS_1% L-glut

text: Homo Sapien

text: SC

characteristic: INSDC last update

text: public

text: human

text: Homo sapiens

characteristic: organism

text: HEL9217 RNA

text: Homo sapiens


text: RPMI1640_10% FBS_1% Glutamax_1% sodium pyruvate_10ng/ml rhGM-CSF

text: Homo Sapien

text: SC

text: public

text: human

text: Homo sapiens

text: F36P RNA

characteristic: sample description

text: Homo sapiens


text: public

tag: Namespace:Sorbonne Universites, UPMC Univ Paris 06, CNRS, Biologie Integrative des Organismes Marins (BIOM), Observatoire Oceanologique,

text: ArrayExpress

characteristic: broker name

text: Arctic char

text: Protocols: adult Salvelinus alpinus Total RNA was extracted using the RNeasy Plus Universal Mini Kit (Qiagen, Hilden, Germany) The normalized, random-primed cDNA library was prepared by Eurofins MWG Operon. PolyA+ mRNA was isolated from total RNA. The cDNA preparation included a random-primed first strand synthesis followed by a second strand synthesis using specific primer ligated to free 3’-OH ends of first strand cDNA. The resulting non-cloned cDNA library was size fractioned to about 400-1200 bp,

characteristic: description

text: adult

characteristic: developmental stage

text: Salvelinus alpinus

text: Salvelinus alpinus

text: Salvelinus alpinus

characteristic: title


text: WIBR3 human PSCs

text: Homo Sapien

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens


text: RPMI1640_10% HiFBS_1% L-glut

text: Normal

characteristic: ArrayExpress-Phenotype

text: Homo Sapien

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: human

text: Homo sapiens

text: HEL9217 ChIP DNA

text: Homo sapiens


characteristic: ArrayExpress-CellType

text: RPMI1640_10% HiFBS_1% L-glut

characteristic: ArrayExpress-GrowthCondition

characteristic: ArrayExpress-Immunoprecipitate

text: Normal

text: Homo Sapien

characteristic: ArrayExpress-Species

text: SC

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: human

text: Homo sapiens

text: HEL9217 ChIP DNA

text: Homo sapiens


text: Normal

text: Homo Sapien

text: SC

characteristic: INSDC last update

text: public

text: human

text: Homo sapiens

characteristic: organism

text: F36P ChIP DNA

characteristic: sample description

text: Homo sapiens


text: Normal

text: Homo Sapien

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: human

text: Homo sapiens

text: Meg01 ChIP DNA

text: Homo sapiens


text: RPMI1640_10% FBS

text: Normal

text: Homo Sapien

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: human

characteristic: common name

text: Homo sapiens

text: KU812 ChIP DNA

text: Homo sapiens


text: Normal

characteristic: ArrayExpress-Phenotype

text: Homo Sapien

characteristic: External Id

text: SC

text: public

text: human

text: Homo sapiens

text: F36P ChIP DNA

text: Homo sapiens


text: RPMI1640_10% FBS

text: Normal

text: Homo Sapien

text: SC

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: human

text: Homo sapiens

text: KU812 ChIP DNA

text: Homo sapiens


characteristic: ArrayExpress-CellType

text: RPMI1640_10% HiFBS_1% L-glut

text: Normal

text: Homo Sapien

text: SC

text: public

characteristic: SRA accession

text: human

text: Homo sapiens

text: K562 ChIP DNA

text: Homo sapiens


text: 25 weeks

characteristic: ArrayExpress-Age

text: OMP-GFP (+/-)

characteristic: ArrayExpress-Genotype

text: olfactory neurons

characteristic: ArrayExpress-OrganismPart

text: male

characteristic: ArrayExpress-Sex

text: House mouse

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: house mouse

text: Mus musculus

text: multiplexed Nextera XT library from populations of 10K OMP-GFP cells

text: Mus musculus

characteristic: strain


characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:Department of Molecular Neuroscience, UCL Institute of Neurology, Queen Square, London WC1N 3BG, UK.  MRC Laboratory of Molecular Biology, Francis Crick Avenue, Cambridge CB2 0QH, UK.

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: human

text: Protocols: Tissue was dissociated in ice-cold PBS buffer and then subjected to UV-C irradiation. Cells were then precipitated by centrifugation for 1 min at 14000 rpm and snap-frozen on dry ice. The iCLIP protocol was followed to isolate RNA bound to FUS protein and amplify a cDNA library as described in the manuscript. The NB100-565 antibody (Novus Biologicals, US) was used at a concentration of 5 ug/mg on human brains. Specific barcodes were used for each RT reaction, with random nucleotides also incorporated into cDNAs to distinguish between PCR duplication of cDNA products; 20090826_LUd6_15: TGNNN, 20100222_LUd12_9: TGNNN, 20100222_LUd12_10: TCNNN. The final products were obtained by PCR with Illumina paired-end sequencing primers: 5-CAAGCAGAAGACGGCATACGAGATCGGTCTCGGCATTCCTGCTGAACCGCTCTTCCGATCT-3; 5-AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCT-3

characteristic: description

text: NB100-565 antibody

characteristic: immunoprecipitate

characteristic: individual

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: brain

characteristic: organism part

text: Homo sapiens

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Department of Molecular Neuroscience, UCL Institute of Neurology, Queen Square, London WC1N 3BG, UK. MRC Laboratory of Molecular Biology, Francis Crick Avenue, Cambridge CB2 0QH, UK.

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ArrayExpress

text: human

characteristic: common name

text: NB100-565 antibody

text: Homo sapiens

text: Homo sapiens

text: brain

text: Homo sapiens


text: Epithelial Cell

characteristic: ArrayExpress-CellType

text: female

characteristic: ArrayExpress-Sex

text: Mus musculus

characteristic: ArrayExpress-Species

characteristic: ArrayExpress-StrainOrLine

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: house mouse

text: Mus musculus

text: RNA

characteristic: sample description

text: Mus musculus

characteristic: strain


text: Mus musculus

text: Spretus

text: SC

text: public

characteristic: Submitter Id

text: house mouse

text: Mus musculus

characteristic: organism

text: cDNA PCR amplified and AMPure? PB Beads purified dsDNA from cDNA

text: Mus musculus

text: Spretus


text: Mus musculus

text: PwK

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: PwK


text: Mus musculus

text: CASTEiJ

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: CASTEiJ


text: Mus musculus

text: SC

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: house mouse

text: Mus musculus

text: Mus musculus


text: EMBL-EBI

text: public

characteristic: SRA accession

text: 6-12 weeks

characteristic: age

text: ArrayExpress

characteristic: broker name

text: T helper cells subtype 2

characteristic: cell type

text: house mouse

characteristic: common name

text: Protocols: Spleens were collected from mice between 6-12 weeks old Untouched naive cells were purified from the spleen with negative selection protocol. Spleens were mashed through a 70nm strainer to obtain single cell suspension Cells were grown in complete IMDM 10% FBS, in presence of IL4 (10ng/ml) Libraries were prepared according to Illumina Paired End sequencing Protocl

characteristic: description

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: 18 hour

characteristic: time

characteristic: title


text: EMBL-EBI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: 6-12 weeks

text: ArrayExpress

text: naive T cells activated (with anti-CD3/CD28) and polarized towards the Th2 subtype with IL4

text: house mouse

text: positive marker

characteristic: differentiated

characteristic: generation

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: anti-CD3/CD28 and polarized towards the Th2 subtype with IL4

characteristic: stimulus


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMBL-EBI

text: public

characteristic: Submitter Id

text: 6-12 weeks

text: ArrayExpress

text: house mouse

text: negative marker

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Mus musculus


characteristic: External Id

text: EMBL-EBI

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 6-12 weeks

characteristic: age

text: ArrayExpress

text: T helper cells subtype 2

text: house mouse

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: 24 hour


text: EMBL-EBI

text: public

text: 6-12 weeks

text: ArrayExpress

characteristic: broker name

text: T helper cells subtype 2

characteristic: cell type

text: house mouse

characteristic: common name

characteristic: description

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: 6 hour

characteristic: time


text: EMBL-EBI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: 6-12 weeks

text: ArrayExpress

text: T helper cells subtype 2

text: house mouse

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: 0 hour

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EMBL-EBI

text: public

text: 6-12 weeks

text: ArrayExpress

text: T helper cells subtype 2

text: house mouse

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: 84 hour


characteristic: ENA-LAST-UPDATE

text: EMBL-EBI

text: public

characteristic: Submitter Id

text: 6-12 weeks

text: ArrayExpress

text: T helper cells subtype 2

text: house mouse

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: 48 hour


text: AML

characteristic: ArrayExpress-Phenotype

text: Homo Sapien

characteristic: ArrayExpress-Species

characteristic: External Id

text: SC

text: public

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens


text: female

characteristic: ArrayExpress-Sex

text: Homo Sapien

text: SC

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: human

text: Homo sapiens

text: Homo sapiens


text: Abdimajid Osman

text: public

tag: Namespace:Abdimajid Osman

text: Platelets

characteristic: cell type

text: human

characteristic: common name

text: Control 1

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: Blood

characteristic: tissue type

text: Control


text: Abdimajid Osman

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Platelets

text: human

text: Control 2

text: Homo sapiens

text: Homo sapiens

text: Blood

text: Control

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Abdimajid Osman

text: public

text: Platelets

text: human

text: Control 3

text: Homo sapiens

text: Homo sapiens

text: Blood

text: Control


text: Abdimajid Osman

text: public

characteristic: Submitter Id

text: Platelets

text: human

text: Control 4

text: Homo sapiens

text: Homo sapiens

text: Blood

text: Control


characteristic: External Id

text: Abdimajid Osman

text: public

text: Platelets

text: human

text: Mirasol 1

text: Homo sapiens

text: Homo sapiens

text: Blood

text: Mirasol


text: Abdimajid Osman

text: public

text: Platelets

text: human

text: Mirasol 2

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Blood

text: Mirasol


text: Abdimajid Osman

text: public

text: Platelets

text: human

text: Mirasol 3

text: Homo sapiens

text: Homo sapiens

text: Blood

text: Mirasol


text: Abdimajid Osman

text: public

text: Platelets

text: human

text: Mirasol 4

text: Homo sapiens

text: Homo sapiens

text: Blood

text: Mirasol


text: Abdimajid Osman

text: public

text: Platelets

text: human

text: Irradiated 1

text: Homo sapiens

text: Homo sapiens

text: Blood

text: Irradiated


text: Abdimajid Osman

text: public

text: Platelets

text: human

text: Irradiated 2

text: Homo sapiens

text: Homo sapiens

text: Blood

text: Irradiated


text: Abdimajid Osman

text: public

text: Platelets

text: human

text: Irradiated 3

text: Homo sapiens

text: Homo sapiens

text: Blood

text: Irradiated


text: Abdimajid Osman

text: public

text: Platelets

text: human

text: Irradiated 4

text: Homo sapiens

text: Homo sapiens

text: Blood

text: Irradiated


text: Abdimajid Osman

text: public

text: Platelets

text: human

text: SSP+ 1

text: Homo sapiens

text: Homo sapiens

text: Blood

text: SSP+


text: Abdimajid Osman

text: public

text: Platelets

text: human

text: SSP+ 2

text: Homo sapiens

text: Homo sapiens

text: Blood

text: SSP+


text: Abdimajid Osman

text: public

text: Platelets

text: human

text: SSP+ 3

text: Homo sapiens

text: Homo sapiens

text: Blood

text: SSP+


text: Abdimajid Osman

text: public

text: Platelets

text: human

text: SSP+ 4

text: Homo sapiens

text: Homo sapiens

text: Blood

text: SSP+


text: Abdimajid Osman

text: public

text: Platelets

text: human

text: Intercept 1

text: Homo sapiens

text: Homo sapiens

text: Blood

text: Intercept


text: Abdimajid Osman

text: public

text: Platelets

text: human

text: Intercept 2

text: Homo sapiens

text: Homo sapiens

text: Blood

text: Intercept


text: Abdimajid Osman

text: public

text: Platelets

text: human

text: Intercept 3

text: Homo sapiens

text: Homo sapiens

text: Blood

text: Intercept


text: Abdimajid Osman

text: public

text: Platelets

text: human

text: Intercept 4

text: Homo sapiens

text: Homo sapiens

text: Blood

text: Intercept


text: Homo Sapien

characteristic: ArrayExpress-Species

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: human

text: Homo sapiens

text: Homo sapiens

characteristic: strain


text: IPK-Gatersleben

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: domesticated barley

text: Sequencing of barley BACs, that constitute the MTP of chromosome 1H

text: Hordeum vulgare subsp. vulgare

text: Hordeum vulgare subsp. vulgare


text: IPK-Gatersleben

text: public

text: domesticated barley

characteristic: common name

text: Sequencing of barley BACs that could not yet be assigned to a barley chromosome

characteristic: description

text: Hordeum vulgare subsp. vulgare

text: Hordeum vulgare subsp. vulgare


text: IPK-Gatersleben

characteristic: INSDC first public

text: public

text: domesticated barley

text: Sequencing of barley BACs, that constitute the MTP of chromosome 2H

text: Hordeum vulgare subsp. vulgare

text: Hordeum vulgare subsp. vulgare


text: Leibniz Institute on Aging - Fritz Lipmann Institute (FLI)

characteristic: INSDC last update

text: public

tag: Namespace:Leibniz Institute on Aging – Fritz Lipmann Institute (FLI)

text: turquoise killifish

characteristic: individual name

text: Nothobranchius furzeri

text: Nothobranchius furzeri

text: female

characteristic: sex

text: Nothobranchius furzeri MZM-0403 MZM-0403_F006 (female)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: turquoise killifish

text: Nothobranchius furzeri

text: Nothobranchius furzeri

text: male

text: Nothobranchius furzeri MZM-0403 MZM-0403_M006 (male)

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: Submitter Id

text: turquoise killifish

text: Nothobranchius furzeri

text: Nothobranchius furzeri

text: male

text: Nothobranchius furzeri MZM-0403 MZM-0403_M007 (male)


text: public

text: turquoise killifish

text: Nothobranchius furzeri

characteristic: organism

text: Nothobranchius furzeri

text: male

text: Nothobranchius furzeri MZM-0403 MZM-0403_M008 (male)


text: public

text: turquoise killifish

text: Nothobranchius furzeri

text: Nothobranchius furzeri

text: female

characteristic: strain

text: Nothobranchius furzeri MZM-0410 MZM-0410_F012 (female)


characteristic: INSDC center name

text: public

text: turquoise killifish

text: Nothobranchius furzeri

text: Nothobranchius furzeri

text: female

text: Nothobranchius furzeri MZM-0410 MZM-0410_F013 (female)


text: public

characteristic: INSDC status

text: turquoise killifish

text: Nothobranchius furzeri

text: Nothobranchius furzeri

text: female

text: Nothobranchius furzeri MZM-0410 MZM-0410_F014 (female)


text: public

characteristic: SRA accession

text: turquoise killifish

text: Nothobranchius furzeri

text: Nothobranchius furzeri

text: female

text: Nothobranchius furzeri MZM-0410 MZM-0410_F015 (female)


text: public

text: turquoise killifish

characteristic: common name

text: Nothobranchius furzeri

text: Nothobranchius furzeri

text: male

text: Nothobranchius furzeri MZM-0410 MZM-0410_M012 (male)


text: public

text: turquoise killifish

text: Nothobranchius furzeri

text: Nothobranchius furzeri

text: male

text: Nothobranchius furzeri MZM-0410 MZM-0410_M013 (male)


text: public

text: turquoise killifish

text: Nothobranchius furzeri

text: Nothobranchius furzeri

text: male

text: Nothobranchius furzeri MZM-0410 MZM-0410_M014 (male)


text: public

text: turquoise killifish

text: Nothobranchius furzeri

text: Nothobranchius furzeri

text: male

text: Nothobranchius furzeri MZM-0410 MZM-0410_M015 (male)


text: public

text: turquoise killifish

text: Nothobranchius furzeri

text: Nothobranchius furzeri

text: female

text: Nothobranchius furzeri MZM-0403 MZM-0403_F007 (female)


text: public

text: turquoise killifish

text: Nothobranchius furzeri

text: Nothobranchius furzeri

text: female

text: Nothobranchius furzeri MZM-0403 MZM-0403_F008 (female)


text: public

text: turquoise killifish

text: Nothobranchius furzeri

text: Nothobranchius furzeri

text: female

text: Nothobranchius furzeri MZM-0403 MZM-0403_F009 (female)


text: public

text: turquoise killifish

text: Nothobranchius furzeri

text: Nothobranchius furzeri

text: female

text: Nothobranchius furzeri MZZW-0701 MZZW-0701_F001 (female)


text: Leibniz Institute on Aging - Fritz Lipmann Institute (FLI)

text: public

text: turquoise killifish

text: Nothobranchius furzeri

text: Nothobranchius furzeri

text: female

text: Nothobranchius furzeri MZZW-0701 MZZW-0701_F002 (female)


text: public

text: turquoise killifish

text: Nothobranchius furzeri

text: Nothobranchius furzeri

text: male

text: Nothobranchius furzeri MZZW-0701 MZZW-0701_M001 (male)


text: public

text: turquoise killifish

text: Nothobranchius furzeri

text: Nothobranchius furzeri

text: male

text: Nothobranchius furzeri MZZW-0701 MZZW-0701_M002 (male)


text: public

text: turquoise killifish

text: Nothobranchius furzeri

text: Nothobranchius furzeri

text: male

text: Nothobranchius furzeri MZZW-0701 MZZW-0701_M003 (male)


text: Instituto Gulbenkian de Ciencia

text: public

tag: Namespace:Instituto Gulbenkian de Ciencia

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: neural stem cell

characteristic: cell type

text: house mouse

text: Protocols: NS5 cells were cultured as previously described (Conti et al. 2005), using laminin as a media supplement (20ug/mL), and plated at a density of 28,000/cm2 NS5 cells were fixed sequentially with di(N-succimidyl) glutarate and 1% formaldehyde in phosphate buffered saline and then lysed, sonicated and immunoprecipitated, as previously described (Castro et al., 2011), with mouse anti-Zeb1 DNA libraries were prepared from 10ng of immunoprecipitated DNA according to the standard Illumina ChIP-seq protocol.

characteristic: description

text: Mus musculus

text: Mus musculus

text: Mus musculus


characteristic: INSDC first public

characteristic: INSDC last update

text: public

unit: week

characteristic: age

text: bluefin notho

characteristic: individual name

text: Nothobranchius rachovii

text: Nothobranchius rachovii

text: male

characteristic: sex

text: Beira 96

text: brain

characteristic: tissue

text: Nothobranchius rachovii Beira 96 NRA_B3, 8 weeks old, brain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: Submitter Id

text: bluefin notho

text: Nothobranchius rachovii

text: Nothobranchius rachovii

text: male

text: Beira 96

text: brain

text: Nothobranchius rachovii Beira 96 NRA_B4, 8 weeks old, brain

characteristic: title


characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Beira killifish

characteristic: common name

text: Nothobranchius kuhntae

characteristic: organism

text: Nothobranchius kuhntae

text: male

characteristic: strain

text: brain

text: Nothobranchius kuhntae MT03-04 NKU_74, 42 weeks old, brain


characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Beira killifish

text: Nothobranchius kuhntae

text: Nothobranchius kuhntae

text: male

text: brain

text: Nothobranchius kuhntae MT03-04 NKU_75, 42 weeks old, brain


text: public

unit: month

characteristic: age

text: turquoise killifish

characteristic: individual name

text: Nothobranchius furzeri

text: Nothobranchius furzeri

text: female

text: GRZ

text: ovary

text: Nothobranchius furzeri GRZ GRZ_GONAD_1, 3 months old, ovary


text: public

text: turquoise killifish

text: Nothobranchius furzeri

text: Nothobranchius furzeri

text: male

characteristic: sex

text: GRZ

text: testis

characteristic: tissue

text: Nothobranchius furzeri GRZ GRZ_GONAD_4, 3 months old, testis


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

unit: day

text: turquoise killifish

text: Nothobranchius furzeri

text: Nothobranchius furzeri

text: male

text: GRZ

text: trunk

text: Nothobranchius furzeri GRZ GRZ_GONAD_10b, 3 days old, trunk


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: turquoise killifish

text: Nothobranchius furzeri

text: Nothobranchius furzeri

text: female

text: GRZ

text: trunk

text: Nothobranchius furzeri GRZ GRZ_GONAD_11b, 3 days old, trunk


text: public

characteristic: Submitter Id

text: turquoise killifish

text: Nothobranchius furzeri

text: Nothobranchius furzeri

text: female

text: GRZ

text: trunk

text: Nothobranchius furzeri GRZ GRZ_GONAD_12b, 3 days old, trunk

characteristic: title


characteristic: INSDC center name

text: public

characteristic: INSDC status

text: turquoise killifish

text: Nothobranchius furzeri

text: Nothobranchius furzeri

text: male

text: GRZ

text: trunk

text: Nothobranchius furzeri GRZ GRZ_GONAD_7b, 3 days old, trunk


text: public

characteristic: SRA accession

text: turquoise killifish

characteristic: common name

text: Nothobranchius furzeri

text: Nothobranchius furzeri

text: male

text: GRZ

text: trunk

text: Nothobranchius furzeri GRZ GRZ_GONAD_8b, 3 days old, trunk


text: Leibniz Institute on Aging - Fritz Lipmann Institute (FLI)

text: public

text: turquoise killifish

text: Nothobranchius furzeri

characteristic: organism

text: Nothobranchius furzeri

text: female

text: GRZ

characteristic: strain

text: trunk

text: Nothobranchius furzeri GRZ GRZ_GONAD_9b, 3 days old, trunk


characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: turquoise killifish

text: Nothobranchius furzeri

text: Nothobranchius furzeri

text: female

text: GRZ

text: trunk

text: Nothobranchius furzeri GRZ GRZ_GONAD_5_0, 0 days old, trunk


text: public

characteristic: age

text: turquoise killifish

characteristic: individual name

text: Nothobranchius furzeri

text: Nothobranchius furzeri

text: male

text: GRZ

text: trunk

text: Nothobranchius furzeri GRZ GRZ_GONAD_6_0, 0 days old, trunk


text: public

text: turquoise killifish

text: Nothobranchius furzeri

text: Nothobranchius furzeri

text: male

characteristic: sex

text: GRZ

text: trunk

characteristic: tissue

text: Nothobranchius furzeri GRZ GRZ_GONAD_8_0, 0 days old, trunk


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: turquoise killifish

text: Nothobranchius furzeri

text: Nothobranchius furzeri

text: male

text: GRZ

text: trunk

text: Nothobranchius furzeri GRZ GRZ_GONAD_10_0, 0 days old, trunk


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: turquoise killifish

text: Nothobranchius furzeri

text: Nothobranchius furzeri

text: female

text: GRZ

text: trunk

text: Nothobranchius furzeri GRZ GRZ_GONAD_12_0, 0 days old, trunk


text: public

characteristic: Submitter Id

unit: dpf

text: turquoise killifish

text: Nothobranchius furzeri

text: Nothobranchius furzeri

text: male

text: GRZ

text: embryo

text: Nothobranchius furzeri GRZ GRZ_GONAD_1_10, 10 dpf old, embryo

characteristic: title


characteristic: INSDC center name

text: public

characteristic: INSDC status

text: turquoise killifish

text: Nothobranchius furzeri

text: Nothobranchius furzeri

text: male

text: GRZ

text: embryo

text: Nothobranchius furzeri GRZ GRZ_GONAD_6_10, 10 dpf old, embryo


text: public

characteristic: SRA accession

text: turquoise killifish

characteristic: common name

text: Nothobranchius furzeri

text: Nothobranchius furzeri

text: female

text: GRZ

text: embryo

text: Nothobranchius furzeri GRZ GRZ_GONAD_7_10, 10 dpf old, embryo


text: public

text: turquoise killifish

text: Nothobranchius furzeri

characteristic: organism

text: Nothobranchius furzeri

text: female

text: GRZ

characteristic: strain

text: embryo

text: Nothobranchius furzeri GRZ GRZ_GONAD_8_10, 10 dpf old, embryo


characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: turquoise killifish

text: Nothobranchius furzeri

text: Nothobranchius furzeri

text: female

text: GRZ

text: embryo

text: Nothobranchius furzeri GRZ GRZ_GONAD_9_10, 10 dpf old, embryo


text: public

characteristic: age

text: turquoise killifish

characteristic: individual name

text: Nothobranchius furzeri

text: Nothobranchius furzeri

text: male

text: GRZ

text: embryo

text: Nothobranchius furzeri GRZ GRZ_GONAD_12_10, 10 dpf old, embryo


text: Rhamphochromis longiceps

characteristic: ArrayExpress-Species

text: SC

text: public

text: tigerfish

text: Rhamphochromis longiceps

text: Metangula

characteristic: sample description

text: Rhamphochromis longiceps


text: Hemitilapia oxyrhynchus

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: giant haplochromis

text: Hemitilapia oxyrhyncha

text: Mangochi

text: Hemitilapia oxyrhyncha


text: Dimidiochromis strigatus

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: haplochromis sunset

text: Dimidiochromis strigatus

text: Mangochi

text: Dimidiochromis strigatus


text: Metriaclima zebra

text: SC

text: public

characteristic: Submitter Id

text: zebra mbuna

text: Maylandia zebra

text: Matema

text: Maylandia zebra


text: Astatotilapia calliptera 'Itupi'

text: SC

characteristic: INSDC center name

text: public

text: Astatotilapia_calliptera__Itupi_-sc-2288189

text: eastern happy

text: Astatotilapia calliptera

text: Lower Itupi

text: Astatotilapia calliptera


text: Astatotilapia calliptera 'Itupi'

text: SC

text: public

characteristic: INSDC status

text: Astatotilapia_calliptera__Itupi_-sc-2288190

text: eastern happy

text: Astatotilapia calliptera

text: Lower Itupi

text: Astatotilapia calliptera


text: Astatotilapia calliptera 'Itupi'

text: SC

text: public

characteristic: SRA accession

text: Astatotilapia_calliptera__Itupi_-sc-2288191

text: eastern happy

text: Astatotilapia calliptera

text: Lower Itupi

text: Astatotilapia calliptera


text: Astatotilapia calliptera 'Itupi'

text: SC

text: public

text: Astatotilapia_calliptera__Itupi_-sc-2288192

text: eastern happy

characteristic: common name

text: Astatotilapia calliptera

text: Upper Itupi

text: Astatotilapia calliptera


text: Leibniz Institute on Aging - Fritz Lipmann Institute (FLI)

text: public

text: turquoise killifish

text: diapause

characteristic: dev stage

text: Nothobranchius furzeri

characteristic: organism

text: pool of individuals

characteristic: sample composition

text: Nothobranchius furzeri

text: GRZ

text: embryo

characteristic: tissue

text: Nothobranchius furzeri GRZ 10G_diap, embryo

characteristic: title


characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: turquoise killifish

text: Nothobranchius furzeri

text: pool of individuals

text: Nothobranchius furzeri

characteristic: strain

text: embryo

text: Nothobranchius furzeri MZM-0403 11M_non_diap, embryo


characteristic: ENA-CHECKLIST

text: public

text: turquoise killifish

text: Nothobranchius furzeri

text: pool of individuals

text: Nothobranchius furzeri

text: embryo

text: Nothobranchius furzeri MZM-0403 12M_non_diap, embryo


characteristic: ENA-FIRST-PUBLIC

text: public

text: turquoise killifish

text: Nothobranchius furzeri

text: pool of individuals

text: Nothobranchius furzeri

text: embryo

text: Nothobranchius furzeri MZM-0403 13M_non_diap, embryo


characteristic: ENA-LAST-UPDATE

text: public

text: turquoise killifish

text: diapause

text: Nothobranchius furzeri

text: pool of individuals

text: Nothobranchius furzeri

text: embryo

text: Nothobranchius furzeri MZM-0403 16M_diap, embryo


characteristic: External Id

text: public

text: turquoise killifish

text: diapause

text: Nothobranchius furzeri

text: pool of individuals

text: Nothobranchius furzeri

text: embryo

text: Nothobranchius furzeri MZM-0403 17M_diap, embryo


text: public

characteristic: Submitter Id

text: turquoise killifish

text: diapause

text: Nothobranchius furzeri

text: pool of individuals

text: Nothobranchius furzeri

text: embryo

text: Nothobranchius furzeri MZM-0403 18M_diap, embryo


characteristic: INSDC center name

text: public

text: turquoise killifish

text: Nothobranchius furzeri

text: pool of individuals

text: Nothobranchius furzeri

text: GRZ

text: embryo

text: Nothobranchius furzeri GRZ 1G_non_diap, embryo


text: public

characteristic: INSDC status

text: turquoise killifish

text: Nothobranchius furzeri

text: pool of individuals

text: Nothobranchius furzeri

text: GRZ

text: embryo

text: Nothobranchius furzeri GRZ 2G_non_diap, embryo


text: public

characteristic: SRA accession

text: turquoise killifish

text: Nothobranchius furzeri

text: pool of individuals

text: Nothobranchius furzeri

text: GRZ

text: embryo

text: Nothobranchius furzeri GRZ 3G_non_diap, embryo


text: public

text: turquoise killifish

characteristic: common name

text: Nothobranchius furzeri

text: pool of individuals

text: Nothobranchius furzeri

text: GRZ

text: embryo

text: Nothobranchius furzeri GRZ 4G_non_diap, embryo


text: public

text: turquoise killifish

text: Nothobranchius furzeri

text: pool of individuals

text: Nothobranchius furzeri

text: GRZ

text: embryo

text: Nothobranchius furzeri GRZ 5G_non_diap, embryo


text: public

text: turquoise killifish

text: diapause

characteristic: dev stage

text: Nothobranchius furzeri

text: pool of individuals

text: Nothobranchius furzeri

text: GRZ

text: embryo

text: Nothobranchius furzeri GRZ 6G_diap, embryo


text: public

text: turquoise killifish

text: diapause

text: Nothobranchius furzeri

characteristic: organism

text: pool of individuals

text: Nothobranchius furzeri

text: GRZ

text: embryo

text: Nothobranchius furzeri GRZ 7G_diap, embryo


text: public

text: turquoise killifish

text: diapause

text: Nothobranchius furzeri

text: pool of individuals

characteristic: sample composition

text: Nothobranchius furzeri

text: GRZ

text: embryo

text: Nothobranchius furzeri GRZ 8G_diap, embryo


text: public

text: turquoise killifish

text: diapause

text: Nothobranchius furzeri

text: pool of individuals

text: Nothobranchius furzeri

text: GRZ

text: embryo

characteristic: tissue

text: Nothobranchius furzeri GRZ 9G_diap, embryo


text: Segmentation:1-4 somites - Segmentation:5-9 somites : ZFS:0000023 - ZFS:0000024

characteristic: ArrayExpress-DevelopmentalStage

text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

characteristic: ArrayExpress-Species

text: mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (ATCACGTT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

characteristic: sample description

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (CGATGTTT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed

characteristic: strain


text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TTAGGCAT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: SRA accession

text: zebrafish

characteristic: common name

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single genotyped embryo homozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TGACCACT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


characteristic: ArrayExpress-DevelopmentalStage

text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: mixed

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (ACAGTGGT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

characteristic: ArrayExpress-Species

text: mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (GCCAATGT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-CHECKLIST

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (CAGATCTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

characteristic: sample description

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC first public

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (ACTTGATG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

text: SC

characteristic: INSDC last update

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (GATCAGCG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed

characteristic: strain


text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TAGCTTGT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

text: SC

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and heterozygous for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (GGCTACAG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and heterozygous for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (CTTGTACT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

text: SC

text: public

text: zebrafish

characteristic: common name

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and heterozygous for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TGGTTGTT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


characteristic: ArrayExpress-DevelopmentalStage

text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: mixed

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and heterozygous for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TCTCGGTT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

characteristic: ArrayExpress-Species

text: mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and heterozygous for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TAAGCGTT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-CHECKLIST

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and heterozygous for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TCCGTCTT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

characteristic: sample description

text: Danio rerio

text: mixed


text: Segmentation:1-4 somites - Segmentation:5-9 somites : ZFS:0000023 - ZFS:0000024

text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC first public

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and heterozygous for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TGTACCTT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

text: SC

characteristic: INSDC last update

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and heterozygous for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TTCTGTGT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed

characteristic: strain


text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and heterozygous for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TCTGCTGT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

text: SC

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and heterozygous for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TTGGAGGT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TCGAGCGT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

text: SC

text: public

text: zebrafish

characteristic: common name

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TGATACGT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


characteristic: ArrayExpress-DevelopmentalStage

text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: mixed

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TGCATAGT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

characteristic: ArrayExpress-Species

text: mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TTGACTCT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-CHECKLIST

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TGCGATCT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

characteristic: sample description

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC first public

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TTCCTGCT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

text: SC

characteristic: INSDC last update

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TAGTGACT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed

characteristic: strain


text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TACAGGAT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

text: SC

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo homozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TCCTCAAT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and homozygous for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TAGTCTTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

text: SC

text: public

text: zebrafish

characteristic: common name

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and homozygous for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TTCCATTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


characteristic: ArrayExpress-DevelopmentalStage

text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: mixed

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and homozygous for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TCGAAGTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Segmentation:1-4 somites - Segmentation:5-9 somites : ZFS:0000023 - ZFS:0000024

text: Whole embryo

text: Danio rerio

characteristic: ArrayExpress-Species

text: mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and homozygous for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TAACGCTG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-CHECKLIST

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and homozygous for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TTGGTATG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

characteristic: sample description

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC first public

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and homozygous for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TGAACTGG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

text: SC

characteristic: INSDC last update

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and homozygous for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TACTTCGG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed

characteristic: strain


text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and homozygous for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TCTCACGG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

text: SC

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and homozygous for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TCAGGAGG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and homozygous for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TAAGTTCG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

text: SC

text: public

text: zebrafish

characteristic: common name

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TCCAGTCG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


characteristic: ArrayExpress-DevelopmentalStage

text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: mixed

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TGTATGCG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

characteristic: ArrayExpress-Species

text: mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TCATTGAG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-CHECKLIST

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TGGCTCAG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

characteristic: sample description

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC first public

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TATGCCAG) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

text: SC

characteristic: INSDC last update

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TCAGATTC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed

characteristic: strain


text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TACTAGTC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

text: SC

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TTCAGCTC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TGTCTATC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Segmentation:1-4 somites - Segmentation:5-9 somites : ZFS:0000023 - ZFS:0000024

text: Whole embryo

text: Danio rerio

text: mixed

text: SC

text: public

text: zebrafish

characteristic: common name

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for both tfap2a, allele sa24445 and tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TATGTGGC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


characteristic: ArrayExpress-DevelopmentalStage

text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: mixed

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TTACTCGC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

characteristic: ArrayExpress-Species

text: mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TCGTTAGC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-CHECKLIST

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TGTTCTCC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

characteristic: sample description

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC first public

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TTCGCACC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

text: SC

characteristic: INSDC last update

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TTGCGTAC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed

characteristic: strain


text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TCTACGAC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

text: SC

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TGACAGAC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TAGAACAC) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

text: SC

text: public

text: zebrafish

characteristic: common name

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single genotyped embryo heterozygous for tfap2a, allele sa24445 and wild type for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TCATCCTA) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


characteristic: ArrayExpress-DevelopmentalStage

text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: mixed

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo wild type for tfap2a, allele sa24445 and homozygous for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TGCTGATA) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

characteristic: ArrayExpress-Species

text: mixed

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo wild type for tfap2a, allele sa24445 and homozygous for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TAGACGGA) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-CHECKLIST

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo wild type for tfap2a, allele sa24445 and homozygous for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TGTGAAGA) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

characteristic: sample description

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC first public

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo wild type for tfap2a, allele sa24445 and homozygous for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TCTCTTCA) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

text: SC

characteristic: INSDC last update

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo wild type for tfap2a, allele sa24445 and homozygous for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TTGTTCCA) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed

characteristic: strain


text: Whole embryo

text: Danio rerio

text: mixed

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo wild type for tfap2a, allele sa24445 and homozygous for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TGAAGCCA) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Segmentation:1-4 somites - Segmentation:5-9 somites : ZFS:0000023 - ZFS:0000024

text: Whole embryo

text: Danio rerio

text: mixed

text: SC

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo wild type for tfap2a, allele sa24445 and homozygous for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TACCACCA) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

text: SC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo wild type for tfap2a, allele sa24445 and homozygous for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (TGCGTGAA) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


text: Whole embryo

text: Danio rerio

text: mixed

text: SC

text: public

text: zebrafish

characteristic: common name

text: Danio rerio

characteristic: organism

text: 3' end enriched mRNA from a single genotyped embryo wild type for tfap2a, allele sa24445 and homozygous for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (GGTGAGTT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed


characteristic: ArrayExpress-DevelopmentalStage

text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: Danio rerio

text: mixed

text: SC

text: public

text: zebrafish

text: Danio rerio

text: 3' end enriched mRNA from a single genotyped embryo wild type for tfap2a, allele sa24445 and homozygous for tfap2c, allele sa18857 ZMP phenotype 192 clutch 1 plus ERCC spike mix 1 (Ambion). A 8 base indexing sequence (GATCTCTT) is bases 13 to 20 of read 1 followed by CG and polyT. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/sanger/Zebrafish_Zmpsearch/zmp_ph192.

text: Danio rerio

text: mixed