text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 188

text: Homo sapiens

text: Homo sapiens


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPI-EVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: blood sample of individual 191

characteristic: description

text: Homo sapiens

characteristic: organism

text: Homo sapiens

characteristic: title


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 191

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 191

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 193

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 193

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 193

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 194

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 194

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 194

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 196

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 196

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 196

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 197

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 197

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 197

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 199

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 199

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 199

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 200

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 200

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 200

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 201

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 201

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 201

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 203

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 203

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 203

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 204

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 204

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 204

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 205

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 205

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 205

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 206

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 206

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 206

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 207

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 207

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 207

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 210

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 210

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 210

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 212

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 212

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 212

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 214

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 214

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 214

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 218

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 218

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 218

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 219

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 219

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 219

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 220

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 220

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 220

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 221

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 221

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 221

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 222

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 222

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 222

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 223

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 223

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 223

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 226

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 226

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 226

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 227

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 227

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 227

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 228

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 228

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 228

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 229

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 229

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 229

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 231

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 231

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 231

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 232

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 232

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 232

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 233

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 233

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 233

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 234

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 234

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 234

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 236

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 236

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 236

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 237

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 237

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 237

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 240

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 240

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 240

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 241

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 241

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 241

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 242

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 242

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 242

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 248

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 248

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 248

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 249

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 249

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 249

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 250

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 250

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 250

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 251

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 251

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 251

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: blood sample of individual 254

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 1 sample of individual 254

text: Homo sapiens

text: Homo sapiens


text: MPI-EVA

text: public

text: human

text: liver lobe 2 sample of individual 254

text: Homo sapiens

text: Homo sapiens


text: MedGenome Labs Ltd

text: public

tag: Namespace:MedGenome Labs Ltd

text: human

text: Patient sample III.3

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: tissue type


text: MedGenome Labs Ltd

text: public

text: human

text: Patient sample III.4

text: Homo sapiens

text: Homo sapiens

text: blood


text: MedGenome Labs Ltd

text: public

text: human

text: Patient sample III.7

text: Homo sapiens

text: Homo sapiens

text: blood


text: Mix Kolf, Yemz, Vass

text: Homo sapiens

characteristic: ArrayExpress-SPECIES

text: SC

text: public

text: human

text: Homo sapiens

text: Homo sapiens

characteristic: subject id


characteristic: ENA-CHECKLIST

text: YORK UNIVERSITY

text: public

tag: Namespace:YORK UNIVERSITY

characteristic: collection date

text: H2AD reactor H2=0%, COD2

text: anaerobic bioreactor

characteristic: environment (biome)

text: anaerobic sludge

characteristic: environment (feature)

text: anaerobic digester sludge

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: miscellaneous natural or artificial environment

characteristic: miscellaneous environmental package

text: metagenome

text: H2AD in-situ

characteristic: project name

text: metagenome

text: pyrosequencing

characteristic: sequencing method


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: YORK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: H2AD reactor H2=10%, COD2

characteristic: description

text: anaerobic bioreactor

text: anaerobic sludge

text: anaerobic digester sludge

text: United Kingdom

text: metagenome

text: metagenome

characteristic: organism

text: H2AD in-situ

text: metagenome

text: pyrosequencing


characteristic: ENA-CHECKLIST

text: YORK UNIVERSITY

text: public

characteristic: collection date

text: H2AD reactor H2=20%, COD2

text: anaerobic bioreactor

characteristic: environment (biome)

text: anaerobic sludge

characteristic: environment (feature)

text: anaerobic digester sludge

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: metagenome

text: metagenome

text: H2AD in-situ

text: metagenome

text: pyrosequencing

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: YORK UNIVERSITY

text: public

text: H2AD reactor H2=30%, COD2

text: anaerobic bioreactor

text: anaerobic sludge

text: anaerobic digester sludge

text: United Kingdom

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

characteristic: miscellaneous environmental package

text: metagenome

text: H2AD in-situ

characteristic: project name

text: metagenome

text: pyrosequencing

characteristic: sequencing method


text: YORK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: H2AD reactor H2=50%, COD2

characteristic: description

text: anaerobic bioreactor

text: anaerobic sludge

text: anaerobic digester sludge

text: United Kingdom

text: metagenome

text: metagenome

characteristic: organism

text: H2AD in-situ

text: metagenome

text: pyrosequencing


characteristic: ENA-CHECKLIST

text: YORK UNIVERSITY

text: public

characteristic: collection date

text: H2AD reactor H2=75%, COD2

text: anaerobic bioreactor

characteristic: environment (biome)

text: anaerobic sludge

characteristic: environment (feature)

text: anaerobic digester sludge

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: metagenome

text: metagenome

text: H2AD in-situ

text: metagenome

text: pyrosequencing

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: YORK UNIVERSITY

text: public

text: H2AD reactor H2=95%, COD2

text: anaerobic bioreactor

text: anaerobic sludge

text: anaerobic digester sludge

text: United Kingdom

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

characteristic: miscellaneous environmental package

text: metagenome

text: H2AD in-situ

characteristic: project name

text: metagenome

text: pyrosequencing

characteristic: sequencing method


text: YORK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: H2AD reactor H2=200%, COD2

characteristic: description

text: anaerobic bioreactor

text: anaerobic sludge

text: anaerobic digester sludge

text: United Kingdom

text: metagenome

text: metagenome

characteristic: organism

text: H2AD in-situ

text: metagenome

text: pyrosequencing


characteristic: ENA-CHECKLIST

text: YORK UNIVERSITY

text: public

characteristic: collection date

text: H2AD reactor H2=0%, COD3

text: anaerobic bioreactor

characteristic: environment (biome)

text: anaerobic sludge

characteristic: environment (feature)

text: anaerobic digester sludge

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: metagenome

text: metagenome

text: H2AD in-situ

text: metagenome

text: pyrosequencing

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: YORK UNIVERSITY

text: public

text: H2AD reactor H2=10%, COD3

text: anaerobic bioreactor

text: anaerobic sludge

text: anaerobic digester sludge

text: United Kingdom

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

characteristic: miscellaneous environmental package

text: metagenome

text: H2AD in-situ

characteristic: project name

text: metagenome

text: pyrosequencing

characteristic: sequencing method


text: YORK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: H2AD reactor H2=20%, COD3

characteristic: description

text: anaerobic bioreactor

text: anaerobic sludge

text: anaerobic digester sludge

text: United Kingdom

text: metagenome

text: metagenome

characteristic: organism

text: H2AD in-situ

text: metagenome

text: pyrosequencing


characteristic: ENA-CHECKLIST

text: YORK UNIVERSITY

text: public

characteristic: collection date

text: H2AD reactor H2=30%, COD3

text: anaerobic bioreactor

characteristic: environment (biome)

text: anaerobic sludge

characteristic: environment (feature)

text: anaerobic digester sludge

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: metagenome

text: metagenome

text: H2AD in-situ

text: metagenome

text: pyrosequencing

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: YORK UNIVERSITY

text: public

text: H2AD reactor H2=50%, COD3

text: anaerobic bioreactor

text: anaerobic sludge

text: anaerobic digester sludge

text: United Kingdom

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

characteristic: miscellaneous environmental package

text: metagenome

text: H2AD in-situ

characteristic: project name

text: metagenome

text: pyrosequencing

characteristic: sequencing method


text: YORK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: H2AD reactor H2=75%, COD3

characteristic: description

text: anaerobic bioreactor

text: anaerobic sludge

text: anaerobic digester sludge

text: United Kingdom

text: metagenome

text: metagenome

characteristic: organism

text: H2AD in-situ

text: metagenome

text: pyrosequencing


characteristic: ENA-CHECKLIST

text: YORK UNIVERSITY

text: public

characteristic: collection date

text: H2AD reactor H2=95%, COD3

text: anaerobic bioreactor

characteristic: environment (biome)

text: anaerobic sludge

characteristic: environment (feature)

text: anaerobic digester sludge

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: metagenome

text: metagenome

text: H2AD in-situ

text: metagenome

text: pyrosequencing

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: URMITE

text: public

text: Guarani virophage is a dsDNA virus isolated from Pampulha lagoon in Brazil, as a part of virophages isolation study aiming at cultuvating all Mimiviridae related-virophages

text: Brazil

characteristic: isolation source

text: Guarani virophage

text: Guarani virophage

text: Guarani virophage genome


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:GEOMAR Helmholtz Centre for Ocean Research Kiel

text: black hamlet

characteristic: common name

text: reef fish (hamlet) sample, part of speciation study

text: Belize

text: Carrie Bow Cay

characteristic: geographic location (region and locality)

text: 16.7653 N, -088.1442 E

characteristic: lat lon

text: Hypoplectrus nigricans

text: Hypoplectrus nigricans

text: gill

characteristic: tissue type


characteristic: ENA-CHECKLIST

text: GEOMAR Helmholtz Centre for Ocean Research Kiel

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: black hamlet

characteristic: description

text: Belize

text: Carrie Bow Cay

text: 16.7653 N, -088.1442 E

text: Hypoplectrus nigricans

characteristic: organism

text: Hypoplectrus nigricans

text: gill


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: black hamlet

text: Belize

characteristic: geographic location (country and/or sea)

text: Carrie Bow Cay

text: 16.8008 N, -088.0789 E

text: Hypoplectrus nigricans

text: Hypoplectrus nigricans

text: gill

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: black hamlet

text: Belize

text: Carrie Bow Cay

text: 16.8058 N, -088.0792 E

text: Hypoplectrus nigricans

text: Hypoplectrus nigricans

text: gill


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: black hamlet

characteristic: common name

text: Honduras

text: Cayos Becerros

text: 15.9558 N, -083.2931 E

text: Hypoplectrus nigricans

text: Hypoplectrus nigricans

text: gill


text: public

text: black hamlet

text: Panama

text: Bocas del Toro

characteristic: geographic location (region and locality)

text: Hypoplectrus nigricans

text: Hypoplectrus nigricans

text: gill, liver, muscle

characteristic: tissue type


characteristic: ENA-CHECKLIST

text: public

characteristic: SRA accession

text: black hamlet

text: Panama

text: Bocas del Toro

text: 09.3775 N, -082.3039 E

characteristic: lat lon

text: Hypoplectrus nigricans

text: Hypoplectrus nigricans

text: gill


text: public

characteristic: Submitter Id

characteristic: collection date

text: black hamlet

characteristic: description

text: Panama

text: Bocas del Toro

text: 10.2392 N, -083.1731 E

text: Hypoplectrus nigricans

text: Hypoplectrus nigricans

text: gill


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: black hamlet

text: Panama

text: Bocas del Toro

text: 09.2983 N, -082.2894 E

text: Hypoplectrus nigricans

characteristic: organism

text: Hypoplectrus nigricans

text: gill


characteristic: External Id

text: public

text: barred hamlet

text: Belize

characteristic: geographic location (country and/or sea)

text: Carrie Bow Cay

text: 16.7653 N, -088.1442 E

text: Hypoplectrus puella

text: Hypoplectrus puella

text: gill

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: barred hamlet

text: Belize

text: Carrie Bow Cay

text: 16.8058 N, -088.0792 E

text: Hypoplectrus puella

text: Hypoplectrus puella

text: gill


text: public

characteristic: INSDC status

text: barred hamlet

characteristic: common name

text: Honduras

text: Cayos Becerros

characteristic: geographic location (region and locality)

text: 15.9558 N, -083.2931 E

text: Hypoplectrus puella

text: Hypoplectrus puella

text: gill


characteristic: ENA-CHECKLIST

text: public

characteristic: SRA accession

text: barred hamlet

text: Honduras

text: Cayos Becerros

text: 15.9558 N, -083.2931 E

text: Hypoplectrus puella

text: Hypoplectrus puella

characteristic: tissue type


text: public

characteristic: Submitter Id

characteristic: collection date

text: barred hamlet

text: Panama

text: Bocas del Toro

text: 10.2392 N, -083.1731 E

characteristic: lat lon

text: Hypoplectrus puella

text: Hypoplectrus puella

text: gill


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: barred hamlet

characteristic: description

text: Panama

text: Bocas del Toro

text: 09.3775 N, -082.3039 E

text: Hypoplectrus puella

text: Hypoplectrus puella

text: gill


characteristic: External Id

text: public

text: barred hamlet

text: Panama

characteristic: geographic location (country and/or sea)

text: Bocas del Toro

text: 09.2983 N, -082.2894 E

text: Hypoplectrus puella

characteristic: organism

text: Hypoplectrus puella

text: gill


characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: barred hamlet

text: Panama

text: Bocas del Toro

text: 09.3681 N, -082.2928 E

text: Hypoplectrus puella

text: Hypoplectrus puella

text: gill, muscle

characteristic: title


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: butter hamlet

characteristic: common name

text: Belize

text: Carrie Bow Cay

text: 16.7653 N, -088.1442 E

text: Hypoplectrus unicolor

text: Hypoplectrus unicolor

text: gill


characteristic: ENA-CHECKLIST

text: public

characteristic: SRA accession

text: butter hamlet

text: Belize

text: Carrie Bow Cay

characteristic: geographic location (region and locality)

text: Hypoplectrus unicolor

text: Hypoplectrus unicolor

text: gill


text: public

characteristic: Submitter Id

characteristic: collection date

text: butter hamlet

text: Belize

text: Carrie Bow Cay

text: 16.7078 N, -087.8598 E

text: Hypoplectrus unicolor

text: Hypoplectrus unicolor

text: gill

characteristic: tissue type


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: butter hamlet

text: Belize

text: Carrie Bow Cay

text: 16.8936 N, -088.1226 E

characteristic: lat lon

text: Hypoplectrus unicolor

text: Hypoplectrus unicolor

text: gill


characteristic: External Id

text: public

text: butter hamlet

characteristic: description

text: Belize

characteristic: geographic location (country and/or sea)

text: Carrie Bow Cay

text: 16.8008 N, -088.0789 E

text: Hypoplectrus unicolor

text: Hypoplectrus unicolor

text: gill


characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: butter hamlet

text: Honduras

text: Cayos Becerros

text: 15.9558 N, -083.2931 E

text: Hypoplectrus unicolor

characteristic: organism

text: Hypoplectrus unicolor

text: gill


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: butter hamlet

text: Panama

text: Bocas del Toro

text: Hypoplectrus unicolor

text: Hypoplectrus unicolor

text: gill

characteristic: title


characteristic: ENA-CHECKLIST

text: public

characteristic: SRA accession

text: butter hamlet

characteristic: common name

text: Panama

text: Bocas del Toro

text: 10.2392 N, -083.1731 E

text: Hypoplectrus unicolor

text: Hypoplectrus unicolor

text: gill


text: public

characteristic: Submitter Id

characteristic: collection date

text: butter hamlet

text: Panama

text: Bocas del Toro

characteristic: geographic location (region and locality)

text: 09.3328 N, -082.2547 E

text: Hypoplectrus unicolor

text: Hypoplectrus unicolor

text: gill


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: butter hamlet

text: Panama

text: Bocas del Toro

text: 09.2983 N, -082.2894 E

text: Hypoplectrus unicolor

text: Hypoplectrus unicolor

text: gill

characteristic: tissue type


characteristic: External Id

text: public

text: butter hamlet

characteristic: description

text: Panama

text: Bocas del Toro

text: 09.2894 N, -082.2589 E

characteristic: lat lon

text: Hypoplectrus unicolor

text: Hypoplectrus unicolor

text: gill


characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: butter hamlet

text: Panama

characteristic: geographic location (country and/or sea)

text: Bocas del Toro

text: 09.3481 N, -082.2633 E

text: Hypoplectrus unicolor

text: Hypoplectrus unicolor

text: gill


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: golden hamlet

text: Panama

text: Bocas del Toro

text: 09.3775 N, -082.3039 E

text: Hypoplectrus gummigutta

characteristic: organism

text: Hypoplectrus gummigutta

text: gill


characteristic: ENA-CHECKLIST

text: NEW YORK UNIVERSITY SCHOOL OF MEDICINE

text: public

characteristic: SRA accession

tag: Namespace:NEW YORK UNIVERSITY SCHOOL OF MEDICINE

text: Herpes simplex virus type 1

text: Human alphaherpesvirus 1

text: Human alphaherpesvirus 1

text: native mRNA sequencing from HSV-1 infected normal human dermal fibroblasts

characteristic: title


text: UNIVERSITY OF MANCHESTER

text: public

tag: Namespace:UNIVERSITY OF MANCHESTER

characteristic: Submitter Id

text: Candida albicans

characteristic: common name

text: Illumina whole genome shotgun sequences of DNA extracted from from saturated 1.5 ml cultures of C. albicans using a MasterPure yeast DNA purification kit (Epicentre) strain NCYC 597

text: Candida albicans

text: Candida albicans

text: C. albicans strain NCYC 597


characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF MANCHESTER

text: public

text: Candida albicans

text: Illumina whole genome shotgun sequences of DNA extracted from from saturated 1.5 ml cultures of C. albicans using a MasterPure yeast DNA purification kit (Epicentre) strain NCYC 4144

text: Candida albicans

text: Candida albicans

text: C. albicans strain NCYC 4144


characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF MANCHESTER

text: public

text: Candida albicans

text: Illumina whole genome shotgun sequences of DNA extracted from from saturated 1.5 ml cultures of C. albicans using a MasterPure yeast DNA purification kit (Epicentre) strain NCYC 4145

text: Candida albicans

text: Candida albicans

text: C. albicans strain NCYC 4145


text: UNIVERSITY OF MANCHESTER

text: public

text: Candida albicans

text: Illumina whole genome shotgun sequences of DNA extracted from from saturated 1.5 ml cultures of C. albicans using a MasterPure yeast DNA purification kit (Epicentre) strain NCYC 4146

text: Candida albicans

text: Candida albicans

text: C. albicans strain NCYC 4146


text: public

tag: Namespace:Section of Tumor Epigenetics, Department of General, Visceral and Pediatric Surgery, University Medical Center Gottingen, 37075 Gottingen, Germany

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: epithelial cell

characteristic: cell type

text: human

text: Protocols: Briefly, cells were crosslinked with 1% formaldehyde for 20 minutes and quenched by Glycine (125mM final concentration). Upon cell scraping, nuclear pellets were prepared in and washed with the nuclear preparation buffer (150mM NaCl, 20 mM EDTA, 50 mM Tris-HCl (pH 7.5), 0.5% v/v NP-40, 1% v/v Triton-X-100, 20 mM NaF). Then samples were sonicated in sonication buffer (150mM NaCl, 20 mM EDTA, 50 mM Tris-HCl (pH 8), 1% v/v NP-40, 0.5% v/v Sodium deoxycholate, 20 mM NaF, 0.1% SDS) for 30 cycles (in L3.6pl) and 25 cycles (in BxPC-3 and Panc-1) using a Bioruptor Pico (Diagenode) and a cycle setting of 30s on and 30s off. Consequently, samples were precleared by incubation with 50% slurry of Sepharose 4B (GE Healthcare) and incubated with antibody overnight. Antibodies included 1µg of p63 (4A4) (sc-8431, Santa-Cruz), 1µg of H3K27ac (196-050, Diagenode), 2µg of BRD4 (C15410337, Diagenode), and 1µg of Rabbit IgG (C15410206, Diagenode). Sepharose beads with Protein A (for rabbit antibodies) or Protein G (for mouse antibodies, 4A4 p63) were added to samples and incubated for 2 hours followed by washes, de-crosslinking, and DNA extraction. Extraction of DNA was performed using Roti(R)-phenol/chloroform/Isoamylalcohol (Roth) extraction followed by precipitation in 100% Ethanol and washes with 70% Ethanol. Libraries for DNA from ChIP were made using the Microplex Library Preparation kit v2 (Diagenode) according to the manufacturer’s instructions.

text: adenocarcinoma

characteristic: disease

text: Homo sapiens

text: Homo sapiens

text: pancreas

characteristic: organism part

text: Homo sapiens


characteristic: External Id

text: Section of Tumor Epigenetics, Department of General, Visceral and Pediatric Surgery, University Medical Center Gottingen, 37075 Gottingen, Germany

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ArrayExpress

text: epithelial cell

text: human

characteristic: description

text: adenocarcinoma

text: Homo sapiens

text: Homo sapiens

text: pancreas

text: Homo sapiens


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: epithelial cell

text: human

text: pancreatic adenosquamous carcinoma

text: celiac lymph node

characteristic: metastatic site

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: pancreas

text: Homo sapiens


characteristic: ENA-CHECKLIST

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: epithelial cell

text: human

text: pancreatic ductal adenocarcinoma

text: Homo sapiens

text: Homo sapiens

text: pancreas

text: Homo sapiens

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: ArrayExpress

characteristic: broker name

text: epithelial cell

text: human

characteristic: common name

text: Protocols: ATAC was performed following the protocol of Buenrostro et al. Briefly, 50,000 L3.6pl cells were trypsinized and washed twice with cold PBS. Then cells were re-suspended in lysis buffer (10mM Tris-HCl pH 7.5, 10mM NaCl, 3mM MgCl2, 0.1% IGEPAL CA-630) and incubated for 15 minutes at a rotating wheel at 4ºC followed by centrifugation and in re-suspended in 50 µl of transposition mix composed of 2.5µl of TDE1 (Nextera Tn5 Transposase), 25 µl TD (2x reaction buffer) in nuclease free water (Nextera DNA Library Prep Kit, FC-121-1030, Illumina). Then it was incubated at 37 degrees for 30 minutes. MinElute PCR Purification kit (Qiagen) was used for DNA extraction following the instructions of the manufacturer. ATAC libraries were made using the Nextera DNA Library Prep Kit according to Buenrostro et al. The libraries were amplified for 15 cycles in total of: 98ºC for 10 seconds, 63ºC for 30 seconds, and 72ºC for 60 seconds.

text: pancreatic adenosquamous carcinoma

text: celiac lymph node

text: Homo sapiens

text: Homo sapiens

text: pancreas

text: Homo sapiens


text: NEW YORK UNIVERSITY SCHOOL OF MEDICINE

text: public

text: Herpes simplex virus type 1

text: Human alphaherpesvirus 1

text: Human alphaherpesvirus 1

text: Illumina paired-end RNA sequencing of HSV-1 infected normal human dermal fibroblasts


text: public

characteristic: collection date

text: black hamlet

text: Panama

characteristic: geographic location (country and/or sea)

text: Bocas del Toro

characteristic: geographic location (region and locality)

text: 09.318 N, -082.222 E

characteristic: lat lon

text: Hypoplectrus nigricans

text: Hypoplectrus nigricans

text: retina

characteristic: tissue type


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: black hamlet

characteristic: description

text: Panama

text: Bocas del Toro

text: 09.301 N, -082.294 E

text: Hypoplectrus nigricans

text: Hypoplectrus nigricans

text: retina


characteristic: ENA-CHECKLIST

text: public

characteristic: INSDC status

characteristic: SRA accession

text: barred hamlet

text: Panama

text: Bocas del Toro

text: 09.318 N, -082.222 E

text: Hypoplectrus puella

characteristic: organism

text: Hypoplectrus puella

text: retina


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: Submitter Id

text: barred hamlet

text: Panama

text: Bocas del Toro

text: 09.301 N, -082.294 E

text: Hypoplectrus puella

text: Hypoplectrus puella

text: retina

characteristic: title


text: public

characteristic: collection date

text: barred hamlet

characteristic: common name

text: Panama

characteristic: geographic location (country and/or sea)

text: Bocas del Toro

text: 09.367 N, -082.291 E

text: Hypoplectrus puella

text: Hypoplectrus puella

text: retina


text: public

text: butter hamlet

text: Panama

text: Bocas del Toro

characteristic: geographic location (region and locality)

text: 09.318 N, -082.222 E

characteristic: lat lon

text: Hypoplectrus unicolor

text: Hypoplectrus unicolor

text: retina

characteristic: tissue type


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: butter hamlet

text: Panama

text: Bocas del Toro

text: 09.301 N, -082.294 E

text: Hypoplectrus unicolor

text: Hypoplectrus unicolor

text: retina


E-MTAB-6661:Sample 1

characteristic: ENA-CHECKLIST

characteristic: INSDC last update

text: public

text: E-MTAB-6661:Sample 1

text: ArrayExpress

characteristic: broker name

text: HeLa

characteristic: cell line

text: epithelial cell

characteristic: cell type

text: human

text: Protocols: Mitotic extracts were derived from isolated mitotic cells treated cells with DMSO (control) or ActD (ActD). Total RNA was isolated from mitotic HeLa cells (shake-off) using trizol (Life technologies). Quantity and total RNA integrity was checked following isolation using an Agilent Technologies 2100 Bioanalyzer. Sample with RNA Integrity Number (RIN) value greater than 8 were selected. The RNA samples were prepared as described before in (Derks et al., 2015) with the following modifications. Five micrograms of total RNA were depleted according to the Illumina Ribo-zero magnetic protocol (www.illumina.com). The Ribo-zero treated RNA was purified using Agencourt RNAClean XP Beads. RNA was fragmented on a Covaris S220. One microliter of the sheared rRNA depleted RNA was loaded on an Agilent Technologies 21000 Bioanalyzer RNA Pico chip to determine successful ribosomal RNA depletion. The sheared RNA sample was concentrated in a Thermo scientific SPD100 speedvac to 5 µl and a sequencing library was prepared according to the Illumina TruSeq Small RNA protocol (www.illumina.com). In short, adapters are subsequently ligated to the 3’end and the 5’end of the RNA. The RNA is reverse transcribed, amplified by PCR and run on SDS-PAGE gel. RNA fragments between 140 - 500 bp are cut out of the gel and purified. One microliter was loaded on an Agilent Technologies 2100 Bioanalyzer using a DNA 1000 assay to determine the library concentration and quality.

characteristic: description

text: cervical adenocarcinoma

characteristic: disease

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

characteristic: organism part

text: Homo sapiens

text: Sample 1


E-MTAB-6661:Sample 2

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6661:Sample 2

characteristic: Submitter Id

text: ArrayExpress

text: HeLa

text: epithelial cell

text: human

text: cervical adenocarcinoma

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: uterine cervix

text: Homo sapiens

text: Sample 2

characteristic: title


E-MTAB-6661:Sample 3

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-6661:Sample 3

text: ArrayExpress

text: HeLa

text: epithelial cell

text: human

characteristic: common name

text: cervical adenocarcinoma

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

text: Homo sapiens

text: Sample 3


E-MTAB-6661:Sample 4

characteristic: ENA-CHECKLIST

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-6661:Sample 4

text: ArrayExpress

text: HeLa

text: epithelial cell

text: human

text: cervical adenocarcinoma

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

text: Homo sapiens

text: Sample 4


text: INRA-META

text: public

text: Sample for study described in Prediction of the intestinal resistome by a novel 3D-based method

text: human-associated habitat

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

characteristic: project name

text: human gut metagenome

text: ABI-solid

characteristic: sequencing method

text: human gut metagenome


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: INRA-META

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: description

text: human-associated habitat

text: feces

text: France

text: human-gut

text: metagenome

text: human gut metagenome

text: Prediction of the intestinal resistome by a novel 3D-based method

text: human gut metagenome

text: ABI-solid

text: human gut metagenome


text: Hospitalization

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: human-associated habitat

text: feces

text: France

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: organism

text: human gut metagenome

text: ABI-solid

text: human gut metagenome

characteristic: title


text: Chronic

characteristic: ENA-CHECKLIST

text: INRA-META

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: human-associated habitat

characteristic: environment (feature)

text: feces

text: Spain

text: human-gut

text: metagenome

text: human gut metagenome

text: human gut metagenome

text: ABI-solid

text: human gut metagenome


text: Short high dose

text: INRA-META

text: public

text: human-associated habitat

text: feces

characteristic: environment (material)

text: Netherlands

characteristic: geographic location (country and/or sea)

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

text: human gut metagenome

text: ABI-solid

text: human gut metagenome


text: Culture

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: INRA-META

text: public

text: human-associated habitat

text: feces

text: Netherlands

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: project name

text: human gut metagenome

text: ABI-solid

characteristic: sequencing method

text: human gut metagenome


characteristic: External Id

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Institute of Experimental Biology, Faculty of Science, Masaryk University

text: ArrayExpress

characteristic: broker name

text: lymphocyte

characteristic: cell type

text: human

characteristic: common name

text: Protocols: Female patient was diagnosed with microcephaly and developmental delay at the Department of Medical Genetics, University Hospital Brno, in 2015. Patient's biological material (peripheral blood) was obtained after the signing the informed consent form (by her parents) following the requirments of The Czech Society of Medical Genetics and Genomics of the Czech Medical Association of J. E. Purkyne. Genomic DNA was extracted from the lymphocytes of the peripheral blood using the MagNaPure system (Roche Ltd, Basel, Swiss) according to manufacturers protocol. Extracted gDNA was diluted in TE buffer and stored in -20C. SureSelectXT Target Enrichment System for Illumina Paired-End Multiplexed Sequencing Library (Agilent Technologies, Santa Clara, CA, USA)

characteristic: description

text: infant

characteristic: developmental stage

text: Genetic multiple congenital anomalies/dysmorphic syndrome - variable intellectual disability

characteristic: disease

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: female

characteristic: sex


characteristic: ENA-CHECKLIST

text: Institute of Experimental Biology, Faculty of Science, Masaryk University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: ArrayExpress

text: lymphocyte

text: human

text: infant

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Nord University

text: public

characteristic: INSDC status

tag: Namespace:Nord University

characteristic: collection date

text: Atlantic salmon

text: Distal intestinal

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: Salmo salar

text: Salmo salar

text: 16S rRNA gene amplicon

characteristic: sequencing method

text: Content sample


characteristic: ENA-CHECKLIST

text: Nord University

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: Atlantic salmon

characteristic: common name

text: Distal intestinal

characteristic: description

text: Norway

text: host-associated

text: metagenome

text: Salmo salar

text: Salmo salar

text: 16S rRNA gene amplicon

text: Mucus sample


text: Nord University

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Atlantic salmon

text: Tank water

text: Norway

unit: m

characteristic: geographic location (depth)

text: metagenome

text: Salmo salar

characteristic: organism

text: Salmo salar

text: Illumina miseq- 16S rRNA gene amplicon

text: Water sample

characteristic: title

text: water

characteristic: water environmental package


RINLET

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Nord University

text: public

characteristic: INSDC status

text: RINLET

characteristic: collection date

text: Atlantic salmon

text: Tank water

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: metagenome

text: Salmo salar

text: Salmo salar

text: Illumina miseq- 16S rRNA gene amplicon

text: Water sample

text: water


characteristic: ENA-CHECKLIST

text: Nord University

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: Atlantic salmon

text: Tank biofilm

text: Norway

characteristic: geographic location (elevation)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: microbial mat/biofilm

characteristic: microbial mat/biofilm environmental package

text: Salmo salar

text: Salmo salar

text: Illumina miseq-16S rRNA gene amplicon

characteristic: sequencing method

text: Biofilm sample


text: CSU Long Beach Biology Department

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:CSU Long Beach Biology Department

characteristic: Submitter Id

text: MGRAST

characteristic: broker name

characteristic: collection time

text: 13A_2 Taxonomy ID:410658

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: garden

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: plant-associated

characteristic: environmental package

text: USA

text: Claremont, CA

characteristic: geographic location (region and locality)

text: metagenome

text: soil

characteristic: mgrast id

text: soil metagenome

characteristic: organism

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

characteristic: sample id

characteristic: sample name

text: soil metagenome

text: illumina

text: 13A_2 Taxonomy ID:410658

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSU Long Beach Biology Department

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MGRAST

characteristic: collection date

text: 15B_2 Taxonomy ID:410658

text: terrestrial biome

text: garden

text: soil

text: plant-associated

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Claremont, CA

text: metagenome

characteristic: investigation type

text: soil

text: soil metagenome

text: plant-associated

text: soil metagenome

text: illumina

characteristic: sequencing method

text: 15B_2 Taxonomy ID:410658


text: CSU Long Beach Biology Department

text: public

characteristic: Submitter Id

text: MGRAST

characteristic: broker name

characteristic: collection time

text: 27A_2 Taxonomy ID:410658

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: garden

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: plant-associated

characteristic: environmental package

text: USA

text: Claremont, CA

characteristic: geographic location (region and locality)

text: metagenome

text: soil

characteristic: mgrast id

text: soil metagenome

characteristic: organism

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

characteristic: sample id

characteristic: sample name

text: soil metagenome

text: illumina

text: 27A_2 Taxonomy ID:410658


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSU Long Beach Biology Department

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MGRAST

characteristic: collection date

text: 5B_2 Taxonomy ID:410658

text: terrestrial biome

text: garden

text: soil

text: plant-associated

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Claremont, CA

text: metagenome

characteristic: investigation type

text: soil

text: soil metagenome

text: plant-associated

text: soil metagenome

text: illumina

text: 5B_2 Taxonomy ID:410658

characteristic: title


text: CSU Long Beach Biology Department

text: public

characteristic: Submitter Id

text: MGRAST

characteristic: broker name

characteristic: collection time

text: 9A_1 Taxonomy ID:410658

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: garden

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: plant-associated

characteristic: environmental package

text: USA

text: Claremont, CA

characteristic: geographic location (region and locality)

text: metagenome

text: soil

characteristic: mgrast id

text: soil metagenome

characteristic: organism

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

characteristic: sample id

text: soil metagenome

text: illumina

characteristic: sequencing method

text: 9A_1 Taxonomy ID:410658


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSU Long Beach Biology Department

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MGRAST

characteristic: collection date

text: 14A_1 Taxonomy ID:410658

text: terrestrial biome

text: garden

text: soil

text: plant-associated

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Claremont, CA

text: metagenome

characteristic: investigation type

text: soil

text: soil metagenome

text: plant-associated

characteristic: sample name

text: soil metagenome

text: illumina

text: 14A_1 Taxonomy ID:410658


text: CSU Long Beach Biology Department

text: public

characteristic: Submitter Id

text: MGRAST

characteristic: broker name

characteristic: collection time

text: 11B_2 Taxonomy ID:410658

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: garden

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: plant-associated

characteristic: environmental package

text: USA

text: Claremont, CA

characteristic: geographic location (region and locality)

text: metagenome

text: soil

characteristic: mgrast id

text: soil metagenome

characteristic: organism

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

characteristic: sample id

text: soil metagenome

text: illumina

text: 11B_2 Taxonomy ID:410658

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSU Long Beach Biology Department

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MGRAST

characteristic: collection date

text: 21A_2 Taxonomy ID:410658

text: terrestrial biome

text: garden

text: soil

text: plant-associated

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Claremont, CA

text: metagenome

characteristic: investigation type

text: soil

text: soil metagenome

text: plant-associated

text: soil metagenome

text: illumina

characteristic: sequencing method

text: 21A_2 Taxonomy ID:410658


text: CSU Long Beach Biology Department

text: public

characteristic: Submitter Id

text: MGRAST

characteristic: broker name

characteristic: collection time

text: 24A_2 Taxonomy ID:410658

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: garden

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: plant-associated

characteristic: environmental package

text: USA

text: Claremont, CA

characteristic: geographic location (region and locality)

text: metagenome

text: soil

characteristic: mgrast id

text: soil metagenome

characteristic: organism

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

characteristic: sample id

characteristic: sample name

text: soil metagenome

text: illumina

text: 24A_2 Taxonomy ID:410658


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSU Long Beach Biology Department

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MGRAST

characteristic: collection date

text: 19B_2 Taxonomy ID:410658

text: terrestrial biome

text: garden

text: soil

text: plant-associated

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Claremont, CA

text: metagenome

characteristic: investigation type

text: soil

text: soil metagenome

text: plant-associated

text: soil metagenome

text: illumina

text: 19B_2 Taxonomy ID:410658

characteristic: title


text: CSU Long Beach Biology Department

text: public

characteristic: Submitter Id

text: MGRAST

characteristic: broker name

characteristic: collection time

text: 8A_2 Taxonomy ID:410658

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: garden

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: plant-associated

characteristic: environmental package

text: USA

text: Claremont, CA

characteristic: geographic location (region and locality)

text: metagenome

text: soil

characteristic: mgrast id

text: soil metagenome

characteristic: organism

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

characteristic: sample id

text: soil metagenome

text: illumina

characteristic: sequencing method

text: 8A_2 Taxonomy ID:410658


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSU Long Beach Biology Department

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MGRAST

characteristic: collection date

text: 7A_2 Taxonomy ID:410658

text: terrestrial biome

text: garden

text: soil

text: plant-associated

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Claremont, CA

text: metagenome

characteristic: investigation type

text: soil

text: soil metagenome

text: plant-associated

characteristic: sample name

text: soil metagenome

text: illumina

text: 7A_2 Taxonomy ID:410658


text: CSU Long Beach Biology Department

text: public

characteristic: Submitter Id

text: MGRAST

characteristic: broker name

characteristic: collection time

text: 14B_2 Taxonomy ID:410658

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: garden

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: plant-associated

characteristic: environmental package

text: USA

text: Claremont, CA

characteristic: geographic location (region and locality)

text: metagenome

text: soil

characteristic: mgrast id

text: soil metagenome

characteristic: organism

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

characteristic: sample id

text: soil metagenome

text: illumina

text: 14B_2 Taxonomy ID:410658

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSU Long Beach Biology Department

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MGRAST

characteristic: collection date

text: 2A_1 Taxonomy ID:410658

text: terrestrial biome

text: garden

text: soil

text: plant-associated

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Claremont, CA

text: metagenome

characteristic: investigation type

text: soil

text: soil metagenome

text: plant-associated

text: soil metagenome

text: illumina

characteristic: sequencing method

text: 2A_1 Taxonomy ID:410658


text: CSU Long Beach Biology Department

text: public

characteristic: Submitter Id

text: MGRAST

characteristic: broker name

characteristic: collection time

text: 4B_1 Taxonomy ID:410658

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: garden

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: plant-associated

characteristic: environmental package

text: USA

text: Claremont, CA

characteristic: geographic location (region and locality)

text: metagenome

text: soil

characteristic: mgrast id

text: soil metagenome

characteristic: organism

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

characteristic: sample id

characteristic: sample name

text: soil metagenome

text: illumina

text: 4B_1 Taxonomy ID:410658


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSU Long Beach Biology Department

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MGRAST

characteristic: collection date

text: 4A_2 Taxonomy ID:410658

text: terrestrial biome

text: garden

text: soil

text: plant-associated

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Claremont, CA

text: metagenome

characteristic: investigation type

text: soil

text: soil metagenome

text: plant-associated

text: soil metagenome

text: illumina

text: 4A_2 Taxonomy ID:410658

characteristic: title


text: CSU Long Beach Biology Department

text: public

characteristic: Submitter Id

text: MGRAST

characteristic: broker name

characteristic: collection time

text: 11A_2 Taxonomy ID:410658

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: garden

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: plant-associated

characteristic: environmental package

text: USA

text: Claremont, CA

characteristic: geographic location (region and locality)

text: metagenome

text: soil

characteristic: mgrast id

text: soil metagenome

characteristic: organism

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

characteristic: sample id

text: soil metagenome

text: illumina

characteristic: sequencing method

text: 11A_2 Taxonomy ID:410658


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSU Long Beach Biology Department

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MGRAST

characteristic: collection date

text: 12B_1 Taxonomy ID:410658

text: terrestrial biome

text: garden

text: soil

text: plant-associated

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Claremont, CA

text: metagenome

characteristic: investigation type

text: soil

text: soil metagenome

text: plant-associated

characteristic: sample name

text: soil metagenome

text: illumina

text: 12B_1 Taxonomy ID:410658


text: CSU Long Beach Biology Department

text: public

characteristic: Submitter Id

text: MGRAST

characteristic: broker name

characteristic: collection time

text: 7B_2 Taxonomy ID:410658

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: garden

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: plant-associated

characteristic: environmental package

text: USA

text: Claremont, CA

characteristic: geographic location (region and locality)

text: metagenome

text: soil

characteristic: mgrast id

text: soil metagenome

characteristic: organism

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

characteristic: sample id

text: soil metagenome

text: illumina

text: 7B_2 Taxonomy ID:410658

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSU Long Beach Biology Department

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MGRAST

characteristic: collection date

text: 19B_1 Taxonomy ID:410658

text: terrestrial biome

text: garden

text: soil

text: plant-associated

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Claremont, CA

text: metagenome

characteristic: investigation type

text: soil

text: soil metagenome

text: plant-associated

text: soil metagenome

text: illumina

characteristic: sequencing method

text: 19B_1 Taxonomy ID:410658


text: CSU Long Beach Biology Department

text: public

characteristic: Submitter Id

text: MGRAST

characteristic: broker name

characteristic: collection time

text: 23B_1 Taxonomy ID:410658

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: garden

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: plant-associated

characteristic: environmental package

text: USA

text: Claremont, CA

characteristic: geographic location (region and locality)

text: metagenome

text: soil

characteristic: mgrast id

text: soil metagenome

characteristic: organism

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

characteristic: sample id

characteristic: sample name

text: soil metagenome

text: illumina

text: 23B_1 Taxonomy ID:410658


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSU Long Beach Biology Department

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MGRAST

characteristic: collection date

text: 25B_1 Taxonomy ID:410658

text: terrestrial biome

text: garden

text: soil

text: plant-associated

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Claremont, CA

text: metagenome

characteristic: investigation type

text: soil

text: soil metagenome

text: plant-associated

text: soil metagenome

text: illumina

text: 25B_1 Taxonomy ID:410658

characteristic: title


text: CSU Long Beach Biology Department

text: public

characteristic: Submitter Id

text: MGRAST

characteristic: broker name

characteristic: collection time

text: 8B_1 Taxonomy ID:410658

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: garden

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: plant-associated

characteristic: environmental package

text: USA

text: Claremont, CA

characteristic: geographic location (region and locality)

text: metagenome

text: soil

characteristic: mgrast id

text: soil metagenome

characteristic: organism

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

characteristic: sample id

text: soil metagenome

text: illumina

characteristic: sequencing method

text: 8B_1 Taxonomy ID:410658


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSU Long Beach Biology Department

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MGRAST

characteristic: collection date

text: 22B_2 Taxonomy ID:410658

text: terrestrial biome

text: garden

text: soil

text: plant-associated

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Claremont, CA

text: metagenome

characteristic: investigation type

text: soil

text: soil metagenome

text: plant-associated

characteristic: sample name

text: soil metagenome

text: illumina

text: 22B_2 Taxonomy ID:410658


text: CSU Long Beach Biology Department

text: public

characteristic: Submitter Id

text: MGRAST

characteristic: broker name

characteristic: collection time

text: 20B_1 Taxonomy ID:410658

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: garden

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: plant-associated

characteristic: environmental package

text: USA

text: Claremont, CA

characteristic: geographic location (region and locality)

text: metagenome

text: soil

characteristic: mgrast id

text: soil metagenome

characteristic: organism

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

characteristic: sample id

text: soil metagenome

text: illumina

text: 20B_1 Taxonomy ID:410658

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSU Long Beach Biology Department

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MGRAST

characteristic: collection date

text: 5A_2 Taxonomy ID:410658

text: terrestrial biome

text: garden

text: soil

text: plant-associated

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Claremont, CA

text: metagenome

characteristic: investigation type

text: soil

text: soil metagenome

text: plant-associated

text: soil metagenome

text: illumina

characteristic: sequencing method

text: 5A_2 Taxonomy ID:410658


text: CSU Long Beach Biology Department

text: public

characteristic: Submitter Id

text: MGRAST

characteristic: broker name

characteristic: collection time

text: 15A_2 Taxonomy ID:410658

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: garden

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: plant-associated

characteristic: environmental package

text: USA

text: Claremont, CA

characteristic: geographic location (region and locality)

text: metagenome

text: soil

characteristic: mgrast id

text: soil metagenome

characteristic: organism

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

characteristic: sample id

characteristic: sample name

text: soil metagenome

text: illumina

text: 15A_2 Taxonomy ID:410658


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSU Long Beach Biology Department

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MGRAST

characteristic: collection date

text: 10A_2 Taxonomy ID:410658

text: terrestrial biome

text: garden

text: soil

text: plant-associated

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Claremont, CA

text: metagenome

characteristic: investigation type

text: soil

text: soil metagenome

text: plant-associated

text: soil metagenome

text: illumina

text: 10A_2 Taxonomy ID:410658

characteristic: title


text: CSU Long Beach Biology Department

text: public

characteristic: Submitter Id

text: MGRAST

characteristic: broker name

characteristic: collection time

text: 5A_1 Taxonomy ID:410658

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: garden

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: plant-associated

characteristic: environmental package

text: USA

text: Claremont, CA

characteristic: geographic location (region and locality)

text: metagenome

text: soil

characteristic: mgrast id

text: soil metagenome

characteristic: organism

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

characteristic: sample id

text: soil metagenome

text: illumina

characteristic: sequencing method

text: 5A_1 Taxonomy ID:410658


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSU Long Beach Biology Department

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MGRAST

characteristic: collection date

text: 8A_1 Taxonomy ID:410658

text: terrestrial biome

text: garden

text: soil

text: plant-associated

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Claremont, CA

text: metagenome

characteristic: investigation type

text: soil

text: soil metagenome

text: plant-associated

characteristic: sample name

text: soil metagenome

text: illumina

text: 8A_1 Taxonomy ID:410658


text: CSU Long Beach Biology Department

text: public

characteristic: Submitter Id

text: MGRAST

characteristic: broker name

characteristic: collection time

text: 19A_1 Taxonomy ID:410658

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: garden

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: plant-associated

characteristic: environmental package

text: USA

text: Claremont, CA

characteristic: geographic location (region and locality)

text: metagenome

text: soil

characteristic: mgrast id

text: soil metagenome

characteristic: organism

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

characteristic: sample id

text: soil metagenome

text: illumina

text: 19A_1 Taxonomy ID:410658

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSU Long Beach Biology Department

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MGRAST

characteristic: collection date

text: 7A_1 Taxonomy ID:410658

text: terrestrial biome

text: garden

text: soil

text: plant-associated

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Claremont, CA

text: metagenome

characteristic: investigation type

text: soil

text: soil metagenome

text: plant-associated

text: soil metagenome

text: illumina

characteristic: sequencing method

text: 7A_1 Taxonomy ID:410658


text: CSU Long Beach Biology Department

text: public

characteristic: Submitter Id

text: MGRAST

characteristic: broker name

characteristic: collection time

text: 25B_2 Taxonomy ID:410658

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: garden

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: plant-associated

characteristic: environmental package

text: USA

text: Claremont, CA

characteristic: geographic location (region and locality)

text: metagenome

text: soil

characteristic: mgrast id

text: soil metagenome

characteristic: organism

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

characteristic: sample id

characteristic: sample name

text: soil metagenome

text: illumina

text: 25B_2 Taxonomy ID:410658


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSU Long Beach Biology Department

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MGRAST

characteristic: collection date

text: 10B_2 Taxonomy ID:410658

text: terrestrial biome

text: garden

text: soil

text: plant-associated

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Claremont, CA

text: metagenome

characteristic: investigation type

text: soil

text: soil metagenome

text: plant-associated

text: soil metagenome

text: illumina

text: 10B_2 Taxonomy ID:410658

characteristic: title


text: CSU Long Beach Biology Department

text: public

characteristic: Submitter Id

text: MGRAST

characteristic: broker name

characteristic: collection time

text: 18A_1 Taxonomy ID:410658

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: garden

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: plant-associated

characteristic: environmental package

text: USA

text: Claremont, CA

characteristic: geographic location (region and locality)

text: metagenome

text: soil

characteristic: mgrast id

text: soil metagenome

characteristic: organism

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

characteristic: sample id

text: soil metagenome

text: illumina

characteristic: sequencing method

text: 18A_1 Taxonomy ID:410658


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSU Long Beach Biology Department

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MGRAST

characteristic: collection date

text: 16A_2 Taxonomy ID:410658

text: terrestrial biome

text: garden

text: soil

text: plant-associated

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Claremont, CA

text: metagenome

characteristic: investigation type

text: soil

text: soil metagenome

text: plant-associated

characteristic: sample name

text: soil metagenome

text: illumina

text: 16A_2 Taxonomy ID:410658


text: CSU Long Beach Biology Department

text: public

characteristic: Submitter Id

text: MGRAST

characteristic: broker name

characteristic: collection time

text: 15A_1 Taxonomy ID:410658

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: garden

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: plant-associated

characteristic: environmental package

text: USA

text: Claremont, CA

characteristic: geographic location (region and locality)

text: metagenome

text: soil

characteristic: mgrast id

text: soil metagenome

characteristic: organism

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

characteristic: sample id

text: soil metagenome

text: illumina

text: 15A_1 Taxonomy ID:410658

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSU Long Beach Biology Department

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MGRAST

characteristic: collection date

text: 8B_2 Taxonomy ID:410658

text: terrestrial biome

text: garden

text: soil

text: plant-associated

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Claremont, CA

text: metagenome

characteristic: investigation type

text: soil

text: soil metagenome

text: plant-associated

text: soil metagenome

text: illumina

characteristic: sequencing method

text: 8B_2 Taxonomy ID:410658


text: CSU Long Beach Biology Department

text: public

characteristic: Submitter Id

text: MGRAST

characteristic: broker name

characteristic: collection time

text: 17B_2 Taxonomy ID:410658

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: garden

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: plant-associated

characteristic: environmental package

text: USA

text: Claremont, CA

characteristic: geographic location (region and locality)

text: metagenome

text: soil

characteristic: mgrast id

text: soil metagenome

characteristic: organism

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

characteristic: sample id

characteristic: sample name

text: soil metagenome

text: illumina

text: 17B_2 Taxonomy ID:410658


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSU Long Beach Biology Department

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MGRAST

characteristic: collection date

text: 16B_2 Taxonomy ID:410658

text: terrestrial biome

text: garden

text: soil

text: plant-associated

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Claremont, CA

text: metagenome

characteristic: investigation type

text: soil

text: soil metagenome

text: plant-associated

text: soil metagenome

text: illumina

text: 16B_2 Taxonomy ID:410658

characteristic: title


text: CSU Long Beach Biology Department

text: public

characteristic: Submitter Id

text: MGRAST

characteristic: broker name

characteristic: collection time

text: 13A_1 Taxonomy ID:410658

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: garden

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: plant-associated

characteristic: environmental package

text: USA

text: Claremont, CA

characteristic: geographic location (region and locality)

text: metagenome

text: soil

characteristic: mgrast id

text: soil metagenome

characteristic: organism

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

characteristic: sample id

text: soil metagenome

text: illumina

characteristic: sequencing method

text: 13A_1 Taxonomy ID:410658


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSU Long Beach Biology Department

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MGRAST

characteristic: collection date

text: 27A_1 Taxonomy ID:410658

text: terrestrial biome

text: garden

text: soil

text: plant-associated

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Claremont, CA

text: metagenome

characteristic: investigation type

text: soil

text: soil metagenome

text: plant-associated

characteristic: sample name

text: soil metagenome

text: illumina

text: 27A_1 Taxonomy ID:410658


text: CSU Long Beach Biology Department

text: public

characteristic: Submitter Id

text: MGRAST

characteristic: broker name

characteristic: collection time

text: 20A_2 Taxonomy ID:410658

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: garden

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: plant-associated

characteristic: environmental package

text: USA

text: Claremont, CA

characteristic: geographic location (region and locality)

text: metagenome

text: soil

characteristic: mgrast id

text: soil metagenome

characteristic: organism

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

characteristic: sample id

text: soil metagenome

text: illumina

text: 20A_2 Taxonomy ID:410658

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSU Long Beach Biology Department

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MGRAST

characteristic: collection date

text: 1A_1 Taxonomy ID:410658

text: terrestrial biome

text: garden

text: soil

text: plant-associated

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Claremont, CA

text: metagenome

characteristic: investigation type

text: soil

text: soil metagenome

text: plant-associated

text: soil metagenome

text: illumina

characteristic: sequencing method

text: 1A_1 Taxonomy ID:410658


text: CSU Long Beach Biology Department

text: public

characteristic: Submitter Id

text: MGRAST

characteristic: broker name

characteristic: collection time

text: 23A_1 Taxonomy ID:410658

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: garden

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: plant-associated

characteristic: environmental package

text: USA

text: Claremont, CA

characteristic: geographic location (region and locality)

text: metagenome

text: soil

characteristic: mgrast id

text: soil metagenome

characteristic: organism

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

characteristic: sample id

characteristic: sample name

text: soil metagenome

text: illumina

text: 23A_1 Taxonomy ID:410658


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSU Long Beach Biology Department

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MGRAST

characteristic: collection date

text: 4B_2 Taxonomy ID:410658

text: terrestrial biome

text: garden

text: soil

text: plant-associated

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Claremont, CA

text: metagenome

characteristic: investigation type

text: soil

text: soil metagenome

text: plant-associated

text: soil metagenome

text: illumina

text: 4B_2 Taxonomy ID:410658

characteristic: title


text: CSU Long Beach Biology Department

text: public

characteristic: Submitter Id

text: MGRAST

characteristic: broker name

characteristic: collection time

text: 20A_1 Taxonomy ID:410658

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: garden

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: plant-associated

characteristic: environmental package

text: USA

text: Claremont, CA

characteristic: geographic location (region and locality)

text: metagenome

text: soil

characteristic: mgrast id

text: soil metagenome

characteristic: organism

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

characteristic: sample id

text: soil metagenome

text: illumina

characteristic: sequencing method

text: 20A_1 Taxonomy ID:410658


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSU Long Beach Biology Department

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MGRAST

characteristic: collection date

text: 6B_2 Taxonomy ID:410658

text: terrestrial biome

text: garden

text: soil

text: plant-associated

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Claremont, CA

text: metagenome

characteristic: investigation type

text: soil

text: soil metagenome

text: plant-associated

characteristic: sample name

text: soil metagenome

text: illumina

text: 6B_2 Taxonomy ID:410658


text: CSU Long Beach Biology Department

text: public

characteristic: Submitter Id

text: MGRAST

characteristic: broker name

characteristic: collection time

text: 25A_1 Taxonomy ID:410658

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: garden

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: plant-associated

characteristic: environmental package

text: USA

text: Claremont, CA

characteristic: geographic location (region and locality)

text: metagenome

text: soil

characteristic: mgrast id

text: soil metagenome

characteristic: organism

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

characteristic: sample id

text: soil metagenome

text: illumina

text: 25A_1 Taxonomy ID:410658

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSU Long Beach Biology Department

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MGRAST

characteristic: collection date

text: 3B_2 Taxonomy ID:410658

text: terrestrial biome

text: garden

text: soil

text: plant-associated

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Claremont, CA

text: metagenome

characteristic: investigation type

text: soil

text: soil metagenome

text: plant-associated

text: soil metagenome

text: illumina

characteristic: sequencing method

text: 3B_2 Taxonomy ID:410658


text: CSU Long Beach Biology Department

text: public

characteristic: Submitter Id

text: MGRAST

characteristic: broker name

characteristic: collection time

text: 1B_2 Taxonomy ID:410658

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: garden

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: plant-associated

characteristic: environmental package

text: USA

text: Claremont, CA

characteristic: geographic location (region and locality)

text: metagenome

text: soil

characteristic: mgrast id

text: soil metagenome

characteristic: organism

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

characteristic: sample id

characteristic: sample name

text: soil metagenome

text: illumina

text: 1B_2 Taxonomy ID:410658


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSU Long Beach Biology Department

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MGRAST

characteristic: collection date

text: 26B_1 Taxonomy ID:410658

text: terrestrial biome

text: garden

text: soil

text: plant-associated

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Claremont, CA

text: metagenome

characteristic: investigation type

text: soil

text: soil metagenome

text: plant-associated

text: soil metagenome

text: illumina

text: 26B_1 Taxonomy ID:410658

characteristic: title