text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: feces

characteristic: description

text: panda

characteristic: environment (biome)

text: gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: China

text: host-associated

text: mimarks-survey

text: metagenome

text: metagenome

text: pyrosequencing

text: The stool of giant panda Chengxiao

characteristic: title


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:Chengdu research base of giant panda breeding

text: feces

text: panda

text: gut

text: feces

text: China

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: metagenome

characteristic: organism

characteristic: project name

text: metagenome

text: pyrosequencing

characteristic: sequencing method

text: The stool of giant panda Chengxiao


text: Chengdu research base of giant panda breeding

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: feces

characteristic: description

text: panda

characteristic: environment (biome)

text: gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: China

text: host-associated

text: mimarks-survey

text: metagenome

text: metagenome

text: pyrosequencing

text: The stool of giant panda Heqi

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: feces

text: panda

text: gut

text: feces

text: China

text: host-associated

text: mimarks-survey

text: metagenome

text: metagenome

text: pyrosequencing

text: The stool of giant panda Chengda


text: public

text: feces

text: panda

text: gut

text: feces

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: metagenome

characteristic: organism

characteristic: project name

text: metagenome

text: pyrosequencing

characteristic: sequencing method

text: The stool of giant panda Qifu


text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: feces

characteristic: description

text: panda

characteristic: environment (biome)

text: gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: China

text: host-associated

text: mimarks-survey

text: metagenome

text: metagenome

text: pyrosequencing

text: The stool of giant panda Suyun

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: feces

text: panda

text: gut

text: feces

text: China

text: host-associated

text: mimarks-survey

text: metagenome

text: metagenome

text: pyrosequencing

text: The stool of giant panda Junjun


text: public

text: feces

text: panda

text: gut

text: feces

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: metagenome

characteristic: organism

characteristic: project name

text: metagenome

text: pyrosequencing

characteristic: sequencing method

text: The stool of giant panda Zhenzhen


text: public

characteristic: SRA accession

tag: Namespace:CHINESE ACADEMY OF AGRICULTURAL SCIENCES

characteristic: Submitter Id

characteristic: collection date

text: foxtail millet

characteristic: common name

characteristic: estimated size

text: China

text: 12183018A and field

characteristic: isolation and growth condition

characteristic: number of replicons

text: Setaria italica

text: shooting stage

characteristic: plant developmental stage

text: field

characteristic: plant growth medium

text: leaves

characteristic: plant structure

text: Setaria italica

text: RNA-seq data of sistl1 and Yugu1

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CHINESE ACADEMY OF AGRICULTURAL SCIENCES

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: foxtail millet

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: 12183018A and field

text: Setaria italica

text: shooting stage

text: field

text: leaves

text: Setaria italica

text: RNA-seq data of sistl1 and Yugu1


text: EMBL - AUSTRALIA

text: public

characteristic: SRA accession

tag: Namespace:EMBL - AUSTRALIA

characteristic: Submitter Id

text: rice weevil

characteristic: common name

text: Sitophilus oryzae adults from a phosphine strong resistant strain (NNSO7525)

characteristic: description

text: Sitophilus oryzae

characteristic: organism

text: Sitophilus oryzae


text: EMBL - AUSTRALIA

text: public

text: rice weevil

text: Sitophilus oryzae adults from a phosphine strong resistant strain collected from Santai China

text: Sitophilus oryzae

text: Sitophilus oryzae

text: Sitophilus oryzae adults from a phosphine strong resistant strain collcted from Santai China

characteristic: title


characteristic: ENA-CHECKLIST

text: EMBL - AUSTRALIA

text: public

text: rice weevil

text: Sitophilus oryzae adults from a phosphine strong resistant strain. Collected from Sangrur, India.

text: Sitophilus oryzae

text: Sitophilus oryzae


characteristic: ENA-FIRST-PUBLIC

text: public

tag: Namespace:Faculty of Biochemistry and Molecular medicine University of Oulu

text: human

text: Homo sapiens

text: Homo sapiens

text: Line 1


characteristic: ENA-LAST-UPDATE

text: Faculty of Biochemistry and Molecular medicine University of Oulu

text: public

text: human

text: Homo sapiens

text: Homo sapiens


RWPE1-Control sample 1-4

characteristic: External Id

text: public

text: RWPE1-Control sample 1-4

text: human

text: Homo sapiens

text: Homo sapiens


text: IFAPA CENTRO DE CHURRIANA (MÁLAGA)

characteristic: INSDC center name

text: public

tag: Namespace:IFAPA CENTRO DE CHURRIANA (MÁLAGA)

characteristic: collection date

text: Pool from 8 F1 lines with high content in vitamin C or L-ascorbic acid (L-AA)

text: Spain

text: 37 14' 26''

text: -6 48' 08''

characteristic: isolation and growth condition

text: Fragaria x ananassa subsp. ananassa

text: Strawberry, Fresa

characteristic: organism common name

text: ripe

characteristic: plant developmental stage

text: soil

characteristic: plant growth medium

text: fruit

characteristic: plant structure

text: octoploid

characteristic: ploidy

text: Fragaria x ananassa subsp. ananassa

text: F1 232 x 1392

characteristic: subspecific genetic lineage rank

text: High content in LAA Pool Replicate 1


text: IFAPA CENTRO DE CHURRIANA (MÁLAGA)

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Pool from 8 F1 lines with low content in vitamin C or L-ascorbic acid (L-AA)

text: Spain

characteristic: geographic location (country and/or sea)

text: 37 14' 26''

characteristic: geographic location (latitude)

text: -6 48' 08''

characteristic: geographic location (longitude)

text: Fragaria x ananassa subsp. ananassa

text: Strawberry, Fresa

text: ripe

text: soil

text: fruit

text: octoploid

text: Fragaria x ananassa subsp. ananassa

text: F1 232 x 1392

text: Low content in LAA Pool Replicate 1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IFAPA CENTRO DE CHURRIANA (MÁLAGA)

characteristic: INSDC center name

text: public

text: Pool from 8 F1 lines contrasting in vitamin C or L-ascorbic acid (L-AA) content

characteristic: description

text: Spain

text: 37 14' 26''

text: -6 48' 08''

text: Fragaria x ananassa subsp. ananassa

characteristic: organism

text: Strawberry, Fresa

text: ripe

text: soil

text: fruit

text: octoploid

text: Fragaria x ananassa subsp. ananassa

text: F1 232 x 1392

text: High content in LAA Pool Replicate 1

characteristic: title


text: IFAPA CENTRO DE CHURRIANA (MÁLAGA)

text: public

characteristic: collection date

text: Spain

text: 37 14' 26''

text: -6 48' 08''

characteristic: isolation and growth condition

text: Fragaria x ananassa subsp. ananassa

text: Strawberry, Fresa

characteristic: organism common name

text: ripe

characteristic: plant developmental stage

text: soil

characteristic: plant growth medium

text: fruit

characteristic: plant structure

text: octoploid

characteristic: ploidy

text: Fragaria x ananassa subsp. ananassa

text: F1 232 x 1392

characteristic: subspecific genetic lineage rank

text: Low content in LAA Pool Replicate 2


text: IFAPA CENTRO DE CHURRIANA (MÁLAGA)

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Spain

characteristic: geographic location (country and/or sea)

text: 37 14' 26''

characteristic: geographic location (latitude)

text: -6 48' 08''

characteristic: geographic location (longitude)

text: Fragaria x ananassa subsp. ananassa

text: Strawberry, Fresa

text: ripe

text: soil

text: fruit

text: octoploid

text: Fragaria x ananassa subsp. ananassa

text: F1 232 x 1392

text: High content in LAA Pool Replicate 3


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IFAPA CENTRO DE CHURRIANA (MÁLAGA)

characteristic: INSDC center name

text: public

characteristic: description

text: Spain

text: 37 14' 26''

text: -6 48' 08''

text: Fragaria x ananassa subsp. ananassa

characteristic: organism

text: Strawberry, Fresa

text: ripe

text: soil

text: fruit

text: octoploid

text: Fragaria x ananassa subsp. ananassa

text: F1 232 x 1392

text: Low content in LAA Pool Replicate 3

characteristic: title


text: Anopheles funestus

characteristic: ArrayExpress-SPECIES

text: SC

text: public

text: African malaria mosquito

characteristic: common name

text: Anopheles funestus

text: Anopheles funestus

characteristic: subject id


text: University of Milan-Bicocca

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:University of Milan-Bicocca

text: Italian Alps Cabernet Sauvignon grape microbiome; V3-V4 16S rRNA region

text: bacterium

text: bacterium


text: University of Milan-Bicocca

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Italian Alps Sauvignon Blanc grape microbiome; V3-V4 16S rRNA region

text: bacterium

text: bacterium


text: University of Milan-Bicocca

text: public

text: Italian Alps soil grape microbiome; V3-V4 16S rRNA region

text: bacterium

text: bacterium


text: University of Milan-Bicocca

text: public

text: Italian Alps Syrah grape microbiome; V3-V4 16S rRNA region

text: bacterium

text: bacterium


text: University of Milan-Bicocca

text: public

text: Northern Italy Cabernet Sauvignon grape microbiome; V3-V4 16S rRNA region

text: bacterium

text: bacterium


text: University of Milan-Bicocca

text: public

text: Northern Italy Sauvignon Blanc grape microbiome; V3-V4 16S rRNA region

text: bacterium

text: bacterium


text: University of Milan-Bicocca

text: public

text: Northern Italy soil grape microbiome; V3-V4 16S rRNA region

text: bacterium

text: bacterium


text: University of Milan-Bicocca

text: public

text: Northern Italy Syrah grape microbiome; V3-V4 16S rRNA region

text: bacterium

text: bacterium


text: University of Milan-Bicocca

text: public

text: Northern Spain Cabernet Sauvignon grape microbiome; V3-V4 16S rRNA region

text: bacterium

text: bacterium


text: University of Milan-Bicocca

text: public

text: Northern Spain Sauvignon Blanc grape microbiome; V3-V4 16S rRNA region

text: bacterium

text: bacterium


text: University of Milan-Bicocca

text: public

text: Northern Spain soil grape microbiome; V3-V4 16S rRNA region

text: bacterium

text: bacterium


text: University of Milan-Bicocca

text: public

text: Northern Spain Syrah grape microbiome; V3-V4 16S rRNA region

text: bacterium

text: bacterium


status: KILLED

text: Public Health Agency of Sweden

text: killed

text: sam_FOHMtest_5473c643-e7d6-4a85-9431-21bcba045337

tag: Namespace:Public Health Agency of Sweden

text: FOHM

text: Sweden

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: host scientific name

text: yes

characteristic: isolate

text: Salmonella enterica

text: Salmonella enterica

text: Salmonella enterica


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

tag: Namespace:INSTITUTE OF INFORMATION SCIENCE, Academia Sinica

text: Blood

characteristic: cell type

text: giant grouper

text: Genome Assembly 3.0 for Giant Grouper

text: 4 years old

characteristic: dev stage

text: Epinephelus lanceolatus

text: Epinephelus lanceolatus

text: Female

characteristic: sex

text: Blood

characteristic: tissue type

text: Giant Grouper Genome 3.0


characteristic: External Id

text: Animal and Plant Health Agency

characteristic: INSDC center name

text: public

tag: Namespace:Animal and Plant Health Agency

characteristic: collection date

text: United Kingdom

text: diseased

characteristic: host health state

text: Turkey

text: tracheal swab

characteristic: isolation source

text: Staphylococcus aureus

characteristic: organism

text: Staphylococcus aureus

text: Livestock associated methicillin resistant Staphylococcus aureus (LA-MRSA)

characteristic: title


text: Centre of Biological Engeneering

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Centre of Biological Engeneering

characteristic: Submitter Id

text: bioreactor sludge metagenome

text: bioreactor sludge metagenome


Inoculum

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Centre of Biological Engineering

text: public

text: Inoculum

tag: Namespace:Centre of Biological Engineering

text: Inoculum

characteristic: description

text: bioreactor sludge metagenome

text: bioreactor sludge metagenome

text: Inoculum


condition

text: Centre of Biological Engineering

text: public

text: condition

text: enrichment

text: bioreactor sludge metagenome

text: bioreactor sludge metagenome

text: enrichment


E-MTAB-6626:Sample 22

text: Postdoctoral Fellow

text: public

text: E-MTAB-6626:Sample 22

tag: Namespace:Postdoctoral Fellow

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: induced pluripotent stem cell

characteristic: cell type

text: human

characteristic: common name

text: Protocols: Pluripotent cell lines were obtained as follows: H9 hESC were purchased from WiCell (WA09) and the hiPSC line MRS2-6 was derived in house from fibroblasts taken from a patient with Mitchell-Riley syndrome, using the CytoTune-iPS 2.0 Sendai Reprogramming Kit (Thermo Fisher Scientific, #A16517) in accordance with the manufacturer’s instructions. Human pluripotent stem cells were maintained in mTeSR1 media on Matrigel-coated tissue culture plastic, and differentiated into pancreatic progenitors using the STEMdiff Pancreatic Progenitor kit (STEMCELL Technologies, 05120). Differentiation was carried out according to the manufacturer’s instructions with the following modifications: (1) cells were initially seeded into 12 well plates (Corning, 353043) at a density of 10e6 cells/well, and (2) stage 1 was extended to last 3 days - rather than 2 - by repeating the final day’s treatment. Samples were harvested for RNA isolation on differentiation days 4, 7, 8 and 12. All tissue culture was carried out in a 5% CO2 air environment at 37oC. RNA was isolated from samples harvested from differentiation cultures using an RNeasy mini kit (Qiagen, cat # 74104). All RNA samples had an RNA integrity number > 9. RNA-seq libraries were generated using the NEBNext Ultra RNA Library Prep Kit, (NEB, E7530L). Messenger RNA was enriched by hybridization to oligo-dT.

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: differentiation into pancreatic progenitor cells

characteristic: growth condition

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Sample 22


E-MTAB-6626:Sample 23

characteristic: External Id

text: Postdoctoral Fellow

characteristic: INSDC center name

text: public

text: E-MTAB-6626:Sample 23

text: ArrayExpress

text: induced pluripotent stem cell

text: human

text: normal

text: wild type genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Homo sapiens

text: Sample 23

characteristic: title


E-MTAB-6626:Sample 24

text: Postdoctoral Fellow

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6626:Sample 24

text: ArrayExpress

text: induced pluripotent stem cell

text: human

text: normal

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Sample 24


E-MTAB-6626:Sample 10

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Postdoctoral Fellow

text: public

text: E-MTAB-6626:Sample 10

characteristic: Submitter Id

text: ArrayExpress

text: induced pluripotent stem cell

text: human

text: Mitchell-Riley syndrome

text: RFX6 c.1129C>T

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Sample 10


E-MTAB-6626:Sample 11

text: Postdoctoral Fellow

text: public

text: E-MTAB-6626:Sample 11

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: induced pluripotent stem cell

characteristic: cell type

text: human

characteristic: description

text: Mitchell-Riley syndrome

text: RFX6 c.1129C>T

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Sample 11


E-MTAB-6626:Sample 12

text: Postdoctoral Fellow

text: public

text: E-MTAB-6626:Sample 12

text: ArrayExpress

text: induced pluripotent stem cell

text: human

characteristic: common name

text: Mitchell-Riley syndrome

characteristic: disease

text: RFX6 c.1129C>T

characteristic: genotype

characteristic: growth condition

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Sample 12


E-MTAB-6626:Sample 13

characteristic: External Id

text: Postdoctoral Fellow

characteristic: INSDC center name

text: public

text: E-MTAB-6626:Sample 13

text: ArrayExpress

text: induced pluripotent stem cell

text: human

text: normal

text: wild type genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Homo sapiens

text: Sample 13

characteristic: title


E-MTAB-6626:Sample 14

text: Postdoctoral Fellow

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6626:Sample 14

text: ArrayExpress

text: induced pluripotent stem cell

text: human

text: normal

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Sample 14


E-MTAB-6626:Sample 15

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Postdoctoral Fellow

text: public

text: E-MTAB-6626:Sample 15

characteristic: Submitter Id

text: ArrayExpress

text: induced pluripotent stem cell

text: human

text: normal

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Sample 15


E-MTAB-6626:Sample 1

text: Postdoctoral Fellow

text: public

text: E-MTAB-6626:Sample 1

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: induced pluripotent stem cell

characteristic: cell type

text: human

characteristic: description

text: Mitchell-Riley syndrome

text: RFX6 c.1129C>T

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Sample 1


E-MTAB-6626:Sample 2

text: Postdoctoral Fellow

text: public

text: E-MTAB-6626:Sample 2

text: ArrayExpress

text: induced pluripotent stem cell

text: human

characteristic: common name

text: Mitchell-Riley syndrome

characteristic: disease

text: RFX6 c.1129C>T

characteristic: genotype

characteristic: growth condition

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Sample 2


E-MTAB-6626:Sample 3

characteristic: External Id

text: Postdoctoral Fellow

characteristic: INSDC center name

text: public

text: E-MTAB-6626:Sample 3

text: ArrayExpress

text: induced pluripotent stem cell

text: human

text: Mitchell-Riley syndrome

text: RFX6 c.1129C>T

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Homo sapiens

text: Sample 3

characteristic: title


E-MTAB-6626:Sample 16

text: Postdoctoral Fellow

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6626:Sample 16

text: ArrayExpress

text: induced pluripotent stem cell

text: human

text: normal

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Sample 16


E-MTAB-6626:Sample 17

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Postdoctoral Fellow

text: public

text: E-MTAB-6626:Sample 17

characteristic: Submitter Id

text: ArrayExpress

text: induced pluripotent stem cell

text: human

text: normal

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Sample 17


E-MTAB-6626:Sample 18

text: Postdoctoral Fellow

text: public

text: E-MTAB-6626:Sample 18

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: induced pluripotent stem cell

characteristic: cell type

text: human

characteristic: description

text: normal

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Sample 18


E-MTAB-6626:Sample 4

text: Postdoctoral Fellow

text: public

text: E-MTAB-6626:Sample 4

text: ArrayExpress

text: induced pluripotent stem cell

text: human

characteristic: common name

text: Mitchell-Riley syndrome

characteristic: disease

text: RFX6 c.1129C>T

characteristic: genotype

characteristic: growth condition

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Sample 4


E-MTAB-6626:Sample 5

characteristic: External Id

text: Postdoctoral Fellow

characteristic: INSDC center name

text: public

text: E-MTAB-6626:Sample 5

text: ArrayExpress

text: induced pluripotent stem cell

text: human

text: Mitchell-Riley syndrome

text: RFX6 c.1129C>T

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Homo sapiens

text: Sample 5

characteristic: title


E-MTAB-6626:Sample 6

text: Postdoctoral Fellow

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6626:Sample 6

text: ArrayExpress

text: induced pluripotent stem cell

text: human

text: Mitchell-Riley syndrome

text: RFX6 c.1129C>T

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Sample 6


E-MTAB-6626:Sample 19

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Postdoctoral Fellow

text: public

text: E-MTAB-6626:Sample 19

characteristic: Submitter Id

text: ArrayExpress

text: induced pluripotent stem cell

text: human

text: normal

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Sample 19


E-MTAB-6626:Sample 20

text: Postdoctoral Fellow

text: public

text: E-MTAB-6626:Sample 20

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: induced pluripotent stem cell

characteristic: cell type

text: human

characteristic: description

text: normal

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Sample 20


E-MTAB-6626:Sample 21

text: Postdoctoral Fellow

text: public

text: E-MTAB-6626:Sample 21

text: ArrayExpress

text: induced pluripotent stem cell

text: human

characteristic: common name

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

characteristic: growth condition

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Sample 21


E-MTAB-6626:Sample 7

characteristic: External Id

text: Postdoctoral Fellow

characteristic: INSDC center name

text: public

text: E-MTAB-6626:Sample 7

text: ArrayExpress

text: induced pluripotent stem cell

text: human

text: Mitchell-Riley syndrome

text: RFX6 c.1129C>T

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Homo sapiens

text: Sample 7

characteristic: title


E-MTAB-6626:Sample 8

text: Postdoctoral Fellow

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6626:Sample 8

text: ArrayExpress

text: induced pluripotent stem cell

text: human

text: Mitchell-Riley syndrome

text: RFX6 c.1129C>T

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Sample 8


E-MTAB-6626:Sample 9

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Postdoctoral Fellow

text: public

text: E-MTAB-6626:Sample 9

characteristic: Submitter Id

text: ArrayExpress

text: induced pluripotent stem cell

text: human

text: Mitchell-Riley syndrome

text: RFX6 c.1129C>T

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: Sample 9


text: public

tag: Namespace:RIVM - National Institute for Public Health and the Environment

characteristic: collection date

text: Patients with Mycobacterium tuberculosis isolates sharing identical DNA fingerprint patterns can be epidemiologically linked. However, municipal health services in the Netherlands are able to confirm an epidemiological link in only around 23% of the patients with isolates clustered by the conventional variable number of tandem repeat (VNTR) genotyping. This research aims to investigate whether whole genome sequencing (WGS) is a more reliable predictor of epidemiological links between tuberculosis patients than VNTR genotyping

characteristic: description

text: Netherlands

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: host health state

text: human

characteristic: host scientific name

text: clinical samples

characteristic: isolation source

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Epidemiological links between tuberculosis cases identified by whole genome sequencing and conventional molecular typing


characteristic: External Id

text: RIVM - National Institute for Public Health and the Environment

characteristic: INSDC center name

text: public

text: Netherlands

text: not collected

text: human

text: clinical samples

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis


text: UCSDMI

text: public

text: days

characteristic: age units

characteristic: anonymized name

characteristic: birthdate

text: Jackson Labs

characteristic: birthplace

characteristic: cage

characteristic: day

text: Vaginal lavage day 0

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal

text: Animal secretion

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: mucus

text: BRF-II

characteristic: facility

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:reproductive system

characteristic: host body habitat

text: UBERON:mucus

characteristic: host body product

text: UBERON:vagina

characteristic: host body site

text: mouse

characteristic: host common name

text: adult

characteristic: host life stage

text: Mus Musculus

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: mouse metagenome

characteristic: organism

text: FALSE

characteristic: pathogen exposure

text: UCSD

text: TRUE

characteristic: reads

text: mouse vagina lavage

characteristic: sample type

text: mouse metagenome

text: female

characteristic: sex

characteristic: strain

characteristic: timepoint

text: Impact of urogential pathogens on mouse vaginal microbiota

characteristic: title

text: GBS

characteristic: treatment group


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: days

characteristic: age units

characteristic: anonymized name

characteristic: birthdate

text: Jackson Labs

characteristic: birthplace

characteristic: cage

characteristic: day

text: Vaginal lavage day 0

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal

text: Animal secretion

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: mucus

text: BRF-II

characteristic: facility

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:reproductive system

characteristic: host body habitat

text: UBERON:mucus

characteristic: host body product

text: UBERON:vagina

text: mouse

text: adult

text: Mus Musculus

characteristic: host scientific name

text: mouse metagenome

text: FALSE

text: UCSD

text: TRUE

text: mouse vagina lavage

text: mouse metagenome

text: female

text: GBS


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: days

characteristic: age units

text: Jackson Labs

text: Vaginal lavage day 0

text: TRUE

text: Host-associated

text: Animal

text: Animal secretion

text: urban biome

text: animal-associated habitat

text: host-associated

text: mucus

text: BRF-II

text: USA:CA:San Diego

text: UBERON:reproductive system

text: UBERON:mucus

text: UBERON:vagina

characteristic: host body site

text: mouse

characteristic: host common name

text: adult

characteristic: host life stage

text: Mus Musculus

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: mouse metagenome

characteristic: organism

text: FALSE

characteristic: pathogen exposure

text: UCSD

text: TRUE

characteristic: reads

text: mouse vagina lavage

characteristic: sample type

text: mouse metagenome

text: female

characteristic: sex

characteristic: strain

characteristic: timepoint

characteristic: title

text: PBS

characteristic: treatment group


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: days

characteristic: age units

characteristic: anonymized name

characteristic: birthdate

text: Jackson Labs

characteristic: birthplace

characteristic: cage

characteristic: day

text: Vaginal lavage day 0

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal

text: Animal secretion

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: mucus

text: BRF-II

characteristic: facility

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:reproductive system

characteristic: host body habitat

text: UBERON:mucus

characteristic: host body product

text: UBERON:vagina

text: mouse

text: adult

text: Mus Musculus

characteristic: host scientific name

text: mouse metagenome

text: FALSE

text: UCSD

text: TRUE

text: mouse vagina lavage

text: mouse metagenome

text: female

text: PBS


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: days

characteristic: age units

text: Jackson Labs

text: Vaginal lavage day 37

characteristic: dilution

text: TRUE

text: Host-associated

text: Animal

text: Animal secretion

text: urban biome

text: animal-associated habitat

text: host-associated

text: mucus

text: BRF-II

text: USA:CA:San Diego

text: UBERON:reproductive system

text: UBERON:mucus

text: UBERON:vagina

characteristic: host body site

text: mouse

characteristic: host common name

text: adult

characteristic: host life stage

text: Mus Musculus

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: mouse metagenome

characteristic: organism

text: TRUE

characteristic: pathogen exposure

text: UCSD

text: TRUE

characteristic: reads

text: mouse vagina lavage

characteristic: sample type

text: mouse metagenome

text: female

characteristic: sex

characteristic: strain

characteristic: timepoint

characteristic: title

text: GBS

characteristic: treatment group


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: days

characteristic: age units

characteristic: anonymized name

characteristic: birthdate

text: Jackson Labs

characteristic: birthplace

characteristic: cage

characteristic: day

text: Vaginal lavage day 38

characteristic: description

characteristic: dilution

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal

text: Animal secretion

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: mucus

text: BRF-II

characteristic: facility

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:reproductive system

characteristic: host body habitat

text: UBERON:mucus

characteristic: host body product

text: UBERON:vagina

text: mouse

text: adult

text: Mus Musculus

characteristic: host scientific name

text: mouse metagenome

text: TRUE

text: UCSD

text: TRUE

text: mouse vagina lavage

text: mouse metagenome

text: female

text: GBS


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: days

characteristic: age units

characteristic: anonymized name

text: Jackson Labs

text: Vaginal lavage day 39

text: TRUE

text: Host-associated

text: Animal

text: Animal secretion

text: urban biome

text: animal-associated habitat

text: host-associated

text: mucus

text: BRF-II

text: USA:CA:San Diego

text: UBERON:reproductive system

text: UBERON:mucus

text: UBERON:vagina

characteristic: host body site

text: mouse

characteristic: host common name

text: adult

characteristic: host life stage

text: Mus Musculus

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: mouse metagenome

characteristic: organism

text: TRUE

characteristic: pathogen exposure

text: UCSD

text: TRUE

characteristic: reads

text: mouse vagina lavage

characteristic: sample type

text: mouse metagenome

text: female

characteristic: sex

characteristic: strain

characteristic: timepoint

characteristic: title

text: GBS

characteristic: treatment group


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: days

characteristic: age units

characteristic: anonymized name

characteristic: birthdate

text: Jackson Labs

characteristic: birthplace

characteristic: cage

characteristic: day

text: Vaginal lavage day 40

characteristic: description

characteristic: dilution

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal

text: Animal secretion

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: mucus

text: BRF-II

characteristic: facility

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:reproductive system

characteristic: host body habitat

text: UBERON:mucus

characteristic: host body product

text: UBERON:vagina

text: mouse

text: adult

text: Mus Musculus

characteristic: host scientific name

text: mouse metagenome

text: TRUE

text: UCSD

text: TRUE

text: mouse vagina lavage

text: mouse metagenome

text: female

text: GBS


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: days

characteristic: age units

characteristic: anonymized name

text: Jackson Labs

text: Vaginal lavage day 41

text: TRUE

text: Host-associated

text: Animal

text: Animal secretion

text: urban biome

text: animal-associated habitat

text: host-associated

text: mucus

text: BRF-II

text: USA:CA:San Diego

text: UBERON:reproductive system

text: UBERON:mucus

text: UBERON:vagina

characteristic: host body site

text: mouse

characteristic: host common name

text: adult

characteristic: host life stage

text: Mus Musculus

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: mouse metagenome

characteristic: organism

text: TRUE

characteristic: pathogen exposure

text: UCSD

text: TRUE

characteristic: reads

text: mouse vagina lavage

characteristic: sample type

text: mouse metagenome

text: female

characteristic: sex

characteristic: strain

characteristic: timepoint

characteristic: title

text: GBS

characteristic: treatment group


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: days

characteristic: age units

characteristic: anonymized name

characteristic: birthdate

text: Jackson Labs

characteristic: birthplace

characteristic: cage

characteristic: day

text: Vaginal lavage day 42

characteristic: description

characteristic: dilution

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal

text: Animal secretion

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: mucus

text: BRF-II

characteristic: facility

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:reproductive system

characteristic: host body habitat

text: UBERON:mucus

characteristic: host body product

text: UBERON:vagina

text: mouse

text: adult

text: Mus Musculus

characteristic: host scientific name

text: mouse metagenome

text: TRUE

text: UCSD

text: TRUE

text: mouse vagina lavage

text: mouse metagenome

text: female

text: GBS


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: days

characteristic: age units

characteristic: anonymized name

text: Jackson Labs

text: Vaginal lavage day 43

text: TRUE

text: Host-associated

text: Animal

text: Animal secretion

text: urban biome

text: animal-associated habitat

text: host-associated

text: mucus

text: BRF-II

text: USA:CA:San Diego

text: UBERON:reproductive system

text: UBERON:mucus

text: UBERON:vagina

characteristic: host body site

text: mouse

characteristic: host common name

text: adult

characteristic: host life stage

text: Mus Musculus

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: mouse metagenome

characteristic: organism

text: TRUE

characteristic: pathogen exposure

text: UCSD

text: TRUE

characteristic: reads

text: mouse vagina lavage

characteristic: sample type

text: mouse metagenome

text: female

characteristic: sex

characteristic: strain

characteristic: timepoint

characteristic: title

text: GBS

characteristic: treatment group


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: days

characteristic: age units

characteristic: anonymized name

characteristic: birthdate

text: Jackson Labs

characteristic: birthplace

characteristic: cage

characteristic: day

text: Vaginal lavage day 44

characteristic: description

characteristic: dilution

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal

text: Animal secretion

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: mucus

text: BRF-II

characteristic: facility

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:reproductive system

characteristic: host body habitat

text: UBERON:mucus

characteristic: host body product

text: UBERON:vagina

text: mouse

text: adult

text: Mus Musculus

characteristic: host scientific name

text: mouse metagenome

text: TRUE

text: UCSD

text: TRUE

text: mouse vagina lavage

text: mouse metagenome

text: female

text: GBS


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: days

characteristic: age units

characteristic: anonymized name

text: Jackson Labs

text: Vaginal lavage day 45

text: TRUE

text: Host-associated

text: Animal

text: Animal secretion

text: urban biome

text: animal-associated habitat

text: host-associated

text: mucus

text: BRF-II

text: USA:CA:San Diego

text: UBERON:reproductive system

text: UBERON:mucus

text: UBERON:vagina

characteristic: host body site

text: mouse

characteristic: host common name

text: adult

characteristic: host life stage

text: Mus Musculus

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: mouse metagenome

characteristic: organism

text: TRUE

characteristic: pathogen exposure

text: UCSD

text: TRUE

characteristic: reads

text: mouse vagina lavage

characteristic: sample type

text: mouse metagenome

text: female

characteristic: sex

characteristic: strain

characteristic: timepoint

characteristic: title

text: GBS

characteristic: treatment group


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: days

characteristic: age units

characteristic: anonymized name

characteristic: birthdate

text: Jackson Labs

characteristic: birthplace

characteristic: cage

characteristic: day

text: Vaginal lavage day 46

characteristic: description

characteristic: dilution

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal

text: Animal secretion

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: mucus

text: BRF-II

characteristic: facility

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:reproductive system

characteristic: host body habitat

text: UBERON:mucus

characteristic: host body product

text: UBERON:vagina

text: mouse

text: adult

text: Mus Musculus

characteristic: host scientific name

text: mouse metagenome

text: TRUE

text: UCSD

text: TRUE

text: mouse vagina lavage

text: mouse metagenome

text: female

text: GBS


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: days

characteristic: age units

characteristic: anonymized name

text: Jackson Labs

text: Vaginal lavage day 47

text: TRUE

text: Host-associated

text: Animal

text: Animal secretion

text: urban biome

text: animal-associated habitat

text: host-associated

text: mucus

text: BRF-II

text: USA:CA:San Diego

text: UBERON:reproductive system

text: UBERON:mucus

text: UBERON:vagina

characteristic: host body site

text: mouse

characteristic: host common name

text: adult

characteristic: host life stage

text: Mus Musculus

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: mouse metagenome

characteristic: organism

text: TRUE

characteristic: pathogen exposure

text: UCSD

text: TRUE

characteristic: reads

text: mouse vagina lavage

characteristic: sample type

text: mouse metagenome

text: female

characteristic: sex

characteristic: strain

characteristic: timepoint

characteristic: title

text: GBS

characteristic: treatment group


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: days

characteristic: age units

characteristic: anonymized name

characteristic: birthdate

text: Jackson Labs

characteristic: birthplace

characteristic: cage

characteristic: day

text: Vaginal lavage day 48

characteristic: description

characteristic: dilution

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal

text: Animal secretion

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: mucus

text: BRF-II

characteristic: facility

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:reproductive system

characteristic: host body habitat

text: UBERON:mucus

characteristic: host body product

text: UBERON:vagina

text: mouse

text: adult

text: Mus Musculus

characteristic: host scientific name

text: mouse metagenome

text: TRUE

text: UCSD

text: TRUE

text: mouse vagina lavage

text: mouse metagenome

text: female

text: GBS


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: days

characteristic: age units

characteristic: anonymized name

text: Jackson Labs

text: Vaginal lavage day 49

text: TRUE

text: Host-associated

text: Animal

text: Animal secretion

text: urban biome

text: animal-associated habitat

text: host-associated

text: mucus

text: BRF-II

text: USA:CA:San Diego

text: UBERON:reproductive system

text: UBERON:mucus

text: UBERON:vagina

characteristic: host body site

text: mouse

characteristic: host common name

text: adult

characteristic: host life stage

text: Mus Musculus

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: mouse metagenome

characteristic: organism

text: TRUE

characteristic: pathogen exposure

text: UCSD

text: TRUE

characteristic: reads

text: mouse vagina lavage

characteristic: sample type

text: mouse metagenome

text: female

characteristic: sex

characteristic: strain

characteristic: timepoint

characteristic: title

text: GBS

characteristic: treatment group


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

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characteristic: ENA-CHECKLIST

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characteristic: reads

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characteristic: longitude

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characteristic: reads

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characteristic: latitude

characteristic: longitude

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characteristic: reads

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