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text: public

characteristic: INSDC status

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text: soil metagenome

characteristic: common name

text: shrub land

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text: metagenome from Crete soil

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: microcontinental island

characteristic: environment (feature)

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characteristic: environment (material)

text: Greece

characteristic: geographic location (country and/or sea)

text: 5 cm

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Crete, Chania

characteristic: geographic location (region and locality)

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characteristic: investigation type

text: soil metagenome

characteristic: organism

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characteristic: sample collection device or method

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text: Illumina HiSeq 2500

text: soil

text: 16S rRNA

text: V3, V4

text: Crete soil metagenome

characteristic: title

text: DOI: 10.1080/0010362930936892

text: coastal and littoral


status: PUBLIC

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text: public

characteristic: INSDC status

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tag: Namespace:INSTITUTE FOR GENOME SCIENCES, UNIVERSITY OF MARYLAND SCHOOL OF MEDICINE

characteristic: Submitter Id

unit: L

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text: soil metagenome

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text: shrub land

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text: Greece

text: 5 cm

unit: m

unit: DD

text: Crete, Chania

text: metagenome

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text: FWD: 5'-ACTCCTACGGGAGGCAGCAG-3' REV: 5'-GGACTACHVGGGTWTCTAAT-3'

text: Chrisoskalitisa, Stomio beach

characteristic: place name

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characteristic: project name

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text: dry ice during sample and transport, storage -80 freezer

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characteristic: target gene

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text: Crete soil metagenome

unit: µg/L

characteristic: total nitrogen

text: DOI: 10.1080/0010362930936892

characteristic: total nitrogen method

characteristic: total organic C method

unit: g/kg

characteristic: total organic carbon

text: coastal and littoral

characteristic: vegetation zone

characteristic: water content

characteristic: water content method


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characteristic: geographic location (country and/or sea)

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characteristic: geographic location (depth)

characteristic: geographic location (elevation)

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characteristic: title

text: DOI: 10.1080/0010362930936892

text: sub-mountainous


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characteristic: total nitrogen

text: DOI: 10.1080/0010362930936892

characteristic: total nitrogen method

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text: lowland

characteristic: vegetation zone

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characteristic: water content method


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characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

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text: Crete, Lassithi

characteristic: geographic location (region and locality)

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text: 16S rRNA

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characteristic: title

text: DOI: 10.1080/0010362930936892

text: coastal and littoral


characteristic: DNA concentration

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characteristic: total nitrogen

text: DOI: 10.1080/0010362930936892

characteristic: total nitrogen method

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text: coastal and littoral

characteristic: vegetation zone

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characteristic: DNA concentration

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characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

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text: Crete, Lassithi

characteristic: geographic location (region and locality)

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text: near Lachana stone arch bridge

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text: soil

text: 16S rRNA

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characteristic: title

text: DOI: 10.1080/0010362930936892

text: lowland


characteristic: DNA concentration

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characteristic: place name

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characteristic: total nitrogen

text: DOI: 10.1080/0010362930936892

characteristic: total nitrogen method

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text: lowland

characteristic: vegetation zone

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characteristic: DNA concentration

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text: public

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characteristic: geographic location (country and/or sea)

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characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Crete, Lassithi

characteristic: geographic location (region and locality)

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text: near Richtis waterfall

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characteristic: sample collection device or method

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text: soil

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characteristic: title

text: DOI: 10.1080/0010362930936892

text: lowland


characteristic: DNA concentration

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text: public

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text: soil metagenome

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text: sand

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text: terrestrial biome

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text: beach, Next to Kalavros

characteristic: place name

characteristic: project name

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characteristic: total nitrogen

text: DOI: 10.1080/0010362930936892

characteristic: total nitrogen method

characteristic: total organic C method

characteristic: total organic carbon

text: coastal and littoral

characteristic: vegetation zone

characteristic: water content

characteristic: water content method


characteristic: DNA concentration

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

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text: soil metagenome

characteristic: common name

text: horticultural plants

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text: microcontinental island

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text: 5 cm

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Crete, Heraklion

characteristic: geographic location (region and locality)

text: metagenome

characteristic: investigation type

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characteristic: organism

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text: HCMR's garden

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characteristic: sample collection device or method

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text: soil

text: 16S rRNA

text: V3, V4

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characteristic: title

text: DOI: 10.1080/0010362930936892

text: coastal and littoral


characteristic: DNA concentration

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text: public

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text: roads/railroads; sand

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text: terrestrial biome

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text: beach in front of Cretaquarium

characteristic: place name

characteristic: project name

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characteristic: total nitrogen

text: DOI: 10.1080/0010362930936892

characteristic: total nitrogen method

characteristic: total organic C method

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text: coastal and littoral

characteristic: vegetation zone

characteristic: water content

characteristic: water content method


characteristic: DNA concentration

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text: public

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characteristic: SRA accession

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text: soil metagenome

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characteristic: environment (feature)

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characteristic: environment (material)

text: Greece

characteristic: geographic location (country and/or sea)

text: 5 cm

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Crete, Heraklion

characteristic: geographic location (region and locality)

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characteristic: investigation type

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characteristic: sample collection device or method

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text: soil

text: 16S rRNA

text: V3, V4

text: Crete soil metagenome

characteristic: title

text: DOI: 10.1080/0010362930936892

text: coastal and littoral


characteristic: DNA concentration

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text: public

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characteristic: SRA accession

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text: terrestrial biome

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text: north of Ag. Eirini

characteristic: place name

characteristic: project name

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characteristic: sample volume or weight for DNA extraction

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text: 16S rRNA

characteristic: target gene

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characteristic: total nitrogen

text: DOI: 10.1080/0010362930936892

characteristic: total nitrogen method

characteristic: total organic C method

characteristic: total organic carbon

text: lowland

characteristic: vegetation zone

characteristic: water content

characteristic: water content method


characteristic: DNA concentration

characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

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text: public

characteristic: INSDC status

characteristic: SRA accession

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text: soil metagenome

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text: conifers

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characteristic: description

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characteristic: environment (biome)

text: microcontinental island

characteristic: environment (feature)

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characteristic: environment (material)

text: Greece

characteristic: geographic location (country and/or sea)

text: 5 cm

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Crete, Heraklion

characteristic: geographic location (region and locality)

text: metagenome

characteristic: investigation type

text: soil metagenome

characteristic: organism

characteristic: pcr primers

text: road to Kato Archanes

text: 15x2.2 cm metal soil core sampler

characteristic: sample collection device or method

text: soil metagenome

text: Illumina HiSeq 2500

text: soil

text: 16S rRNA

text: V3, V4

text: Crete soil metagenome

characteristic: title

text: DOI: 10.1080/0010362930936892

text: sub-mountainous


characteristic: DNA concentration

characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

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characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

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characteristic: collection date

text: soil metagenome

characteristic: common name

text: conifers; roads/railroads

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text: terrestrial biome

text: microcontinental island

text: soil

text: Greece

text: 5 cm

text: Crete, Heraklion

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text: soil metagenome

text: road to Kato Archanes

characteristic: place name

characteristic: project name

text: 15x2.2 cm metal soil core sampler

characteristic: sample volume or weight for DNA extraction

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characteristic: sequencing method

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characteristic: soil environmental package

characteristic: source material identifiers

characteristic: storage conditions (fresh/frozen/other)

text: 16S rRNA

characteristic: target gene

text: V3, V4

characteristic: target subfragment

text: Crete soil metagenome

characteristic: total nitrogen

text: DOI: 10.1080/0010362930936892

characteristic: total nitrogen method

characteristic: total organic C method

characteristic: total organic carbon

text: sub-mountainous

characteristic: vegetation zone

characteristic: water content

characteristic: water content method


characteristic: DNA concentration

characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: amount or size of sample collected

characteristic: collection date

text: soil metagenome

characteristic: common name

text: vine crops

characteristic: current land use (emp 500 soil)

text: metagenome from Crete soil

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: microcontinental island

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Greece

characteristic: geographic location (country and/or sea)

text: 5 cm

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Crete, Heraklion

characteristic: geographic location (region and locality)

text: metagenome

characteristic: investigation type

text: soil metagenome

characteristic: organism

characteristic: pcr primers

text: Stilianou Vineyard

text: 15x2.2 cm metal soil core sampler

characteristic: sample collection device or method

text: soil metagenome

text: Illumina HiSeq 2500

text: soil

text: 16S rRNA

text: V3, V4

text: Crete soil metagenome

characteristic: title

text: DOI: 10.1080/0010362930936892

text: sub-mountainous


characteristic: DNA concentration

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: amount or size of sample collected

characteristic: collection date

text: soil metagenome

characteristic: common name

text: shrub land; road

text: metagenome from Crete soil

text: terrestrial biome

text: microcontinental island

text: soil

text: Greece

text: 5 cm

text: Crete, Heraklion

text: metagenome

text: soil metagenome

text: Hersonisos Highway - Kastelli Junction

characteristic: place name

characteristic: project name

text: 15x2.2 cm metal soil core sampler

characteristic: sample volume or weight for DNA extraction

text: soil metagenome

text: Illumina HiSeq 2500

characteristic: sequencing method

text: soil

characteristic: soil environmental package

characteristic: source material identifiers

characteristic: storage conditions (fresh/frozen/other)

text: 16S rRNA

characteristic: target gene

text: V3, V4

characteristic: target subfragment

text: Crete soil metagenome

characteristic: total nitrogen

text: DOI: 10.1080/0010362930936892

characteristic: total nitrogen method

characteristic: total organic C method

characteristic: total organic carbon

text: lowland

characteristic: vegetation zone

characteristic: water content

characteristic: water content method


characteristic: DNA concentration

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: amount or size of sample collected

characteristic: collection date

text: soil metagenome

characteristic: common name

text: shrub land; road

characteristic: current land use (emp 500 soil)

text: metagenome from Crete soil

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: microcontinental island

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Greece

characteristic: geographic location (country and/or sea)

text: 5 cm

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Crete, Lassithi

characteristic: geographic location (region and locality)

text: metagenome

characteristic: investigation type

text: soil metagenome

characteristic: organism

characteristic: pcr primers

text: Lasithi plateau near Ag. Charalampos

text: 15x2.2 cm metal soil core sampler

characteristic: sample collection device or method

text: soil metagenome

text: Illumina HiSeq 2500

text: soil

text: 16S rRNA

text: V3, V4

text: Crete soil metagenome

characteristic: title

text: DOI: 10.1080/0010362930936892

text: mountainous


characteristic: DNA concentration

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: amount or size of sample collected

characteristic: collection date

text: soil metagenome

characteristic: common name

text: hardwoods; shrub land

text: metagenome from Crete soil

text: terrestrial biome

text: microcontinental island

text: soil

text: Greece

text: 5 cm

text: Crete, Lassithi

text: metagenome

text: soil metagenome

text: Lasithi plateau provincial road Neapoli - Chersonisos, NW of Lasithi

characteristic: place name

characteristic: project name

text: 15x2.2 cm metal soil core sampler

characteristic: sample volume or weight for DNA extraction

text: soil metagenome

text: Illumina HiSeq 2500

characteristic: sequencing method

text: soil

characteristic: soil environmental package

characteristic: source material identifiers

characteristic: storage conditions (fresh/frozen/other)

text: 16S rRNA

characteristic: target gene

text: V3, V4

characteristic: target subfragment

text: Crete soil metagenome

characteristic: total nitrogen

text: DOI: 10.1080/0010362930936892

characteristic: total nitrogen method

characteristic: total organic C method

characteristic: total organic carbon

text: mountainous

characteristic: vegetation zone

characteristic: water content

characteristic: water content method


characteristic: DNA concentration

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: amount or size of sample collected

characteristic: collection date

text: soil metagenome

characteristic: common name

text: hardwoods; road

characteristic: current land use (emp 500 soil)

text: metagenome from Crete soil

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: microcontinental island

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Greece

characteristic: geographic location (country and/or sea)

text: 5 cm

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Crete, Lassithi

characteristic: geographic location (region and locality)

text: metagenome

characteristic: investigation type

text: soil metagenome

characteristic: organism

characteristic: pcr primers

text: Lasithi plateau provincial road Neapoli - Chersonisos, NE of Lasithi

text: 15x2.2 cm metal soil core sampler

characteristic: sample collection device or method

text: soil metagenome

text: Illumina HiSeq 2500

text: soil

text: 16S rRNA

text: V3, V4

text: Crete soil metagenome

characteristic: title

text: DOI: 10.1080/0010362930936892

text: mountainous


characteristic: DNA concentration

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: amount or size of sample collected

characteristic: collection date

text: soil metagenome

characteristic: common name

text: shrub land

text: metagenome from Crete soil

text: terrestrial biome

text: microcontinental island

text: soil

text: Greece

text: 5 cm

text: Crete, Lassithi

text: metagenome

text: soil metagenome

text: road between Zenia & Ano Amygdaloi

characteristic: place name

characteristic: project name

text: 15x2.2 cm metal soil core sampler

characteristic: sample volume or weight for DNA extraction

text: soil metagenome

text: Illumina HiSeq 2500

characteristic: sequencing method

text: soil

characteristic: soil environmental package

characteristic: source material identifiers

characteristic: storage conditions (fresh/frozen/other)

text: 16S rRNA

characteristic: target gene

text: V3, V4

characteristic: target subfragment

text: Crete soil metagenome

characteristic: total nitrogen

text: DOI: 10.1080/0010362930936892

characteristic: total nitrogen method

characteristic: total organic C method

characteristic: total organic carbon

text: sub-mountainous

characteristic: vegetation zone

characteristic: water content

characteristic: water content method


characteristic: DNA concentration

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: amount or size of sample collected

characteristic: collection date

text: soil metagenome

characteristic: common name

text: shrub land; sand

characteristic: current land use (emp 500 soil)

text: metagenome from Crete soil

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: microcontinental island

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Greece

characteristic: geographic location (country and/or sea)

text: 5 cm

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Crete, Lassithi

characteristic: geographic location (region and locality)

text: metagenome

characteristic: investigation type

text: soil metagenome

characteristic: organism

characteristic: pcr primers

text: Kolokytha beach

text: 15x2.2 cm metal soil core sampler

characteristic: sample collection device or method

text: soil metagenome

text: Illumina HiSeq 2500

text: soil

text: 16S rRNA

text: V3, V4

text: Crete soil metagenome

characteristic: title

text: DOI: 10.1080/0010362930936892

text: coastal and littoral


characteristic: DNA concentration

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: amount or size of sample collected

characteristic: collection date

text: soil metagenome

characteristic: common name

text: road

text: metagenome from Crete soil

text: terrestrial biome

text: microcontinental island

text: soil

text: Greece

text: 5 cm

text: Crete, Heraklion

text: metagenome

text: soil metagenome

text: Former US Base Gournes

characteristic: place name

characteristic: project name

text: 15x2.2 cm metal soil core sampler

characteristic: sample volume or weight for DNA extraction

text: soil metagenome

text: Illumina HiSeq 2500

characteristic: sequencing method

text: soil

characteristic: soil environmental package

characteristic: source material identifiers

characteristic: storage conditions (fresh/frozen/other)

text: 16S rRNA

characteristic: target gene

text: V3, V4

characteristic: target subfragment

text: Crete soil metagenome

characteristic: total nitrogen

text: DOI: 10.1080/0010362930936892

characteristic: total nitrogen method

characteristic: total organic C method

characteristic: total organic carbon

text: coastal and littoral

characteristic: vegetation zone

characteristic: water content

characteristic: water content method


characteristic: DNA concentration

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: amount or size of sample collected

characteristic: collection date

text: soil metagenome

characteristic: common name

text: crop trees

characteristic: current land use (emp 500 soil)

text: metagenome from Crete soil

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: microcontinental island

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Greece

characteristic: geographic location (country and/or sea)

text: 5 cm

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Crete, Heraklion

characteristic: geographic location (region and locality)

text: metagenome

characteristic: investigation type

text: soil metagenome

characteristic: organism

characteristic: pcr primers

text: Dafnes

text: 15x2.2 cm metal soil core sampler

characteristic: sample collection device or method

text: soil metagenome

text: Illumina HiSeq 2500

text: soil

text: 16S rRNA

text: V3, V4

text: Crete soil metagenome

characteristic: title

text: DOI: 10.1080/0010362930936892

text: lowland


characteristic: DNA concentration

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: amount or size of sample collected

characteristic: collection date

text: soil metagenome

characteristic: common name

text: vine crops

text: metagenome from Crete soil

text: terrestrial biome

text: microcontinental island

text: soil

text: Greece

text: 5 cm

text: Crete, Heraklion

text: metagenome

text: soil metagenome

text: Dafnes

characteristic: place name

characteristic: project name

text: 15x2.2 cm metal soil core sampler

characteristic: sample volume or weight for DNA extraction

text: soil metagenome

text: Illumina HiSeq 2500

characteristic: sequencing method

text: soil

characteristic: soil environmental package

characteristic: source material identifiers

characteristic: storage conditions (fresh/frozen/other)

text: 16S rRNA

characteristic: target gene

text: V3, V4

characteristic: target subfragment

text: Crete soil metagenome

characteristic: total nitrogen

text: DOI: 10.1080/0010362930936892

characteristic: total nitrogen method

characteristic: total organic C method

characteristic: total organic carbon

text: lowland

characteristic: vegetation zone

characteristic: water content

characteristic: water content method


characteristic: DNA concentration

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: amount or size of sample collected

characteristic: collection date

text: soil metagenome

characteristic: common name

text: shrub land; sand

characteristic: current land use (emp 500 soil)

text: metagenome from Crete soil

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: microcontinental island

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Greece

characteristic: geographic location (country and/or sea)

text: 5 cm

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Crete, Heraklion

characteristic: geographic location (region and locality)

text: metagenome

characteristic: investigation type

text: soil metagenome

characteristic: organism

characteristic: pcr primers

text: Comos beach

text: 15x2.2 cm metal soil core sampler

characteristic: sample collection device or method

text: soil metagenome

text: Illumina HiSeq 2500

text: soil

text: 16S rRNA

text: V3, V4

text: Crete soil metagenome

characteristic: title

text: DOI: 10.1080/0010362930936892

text: coastal and littoral


characteristic: DNA concentration

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: amount or size of sample collected

characteristic: collection date

text: soil metagenome

characteristic: common name

text: crop trees

text: metagenome from Crete soil

text: terrestrial biome

text: microcontinental island

text: soil

text: Greece

text: 5 cm

text: Crete, Heraklion

text: metagenome

text: soil metagenome

text: sideroad to Sivos

characteristic: place name

characteristic: project name

text: 15x2.2 cm metal soil core sampler

characteristic: sample volume or weight for DNA extraction

text: soil metagenome

text: Illumina HiSeq 2500

characteristic: sequencing method

text: soil

characteristic: soil environmental package

characteristic: source material identifiers

characteristic: storage conditions (fresh/frozen/other)

text: 16S rRNA

characteristic: target gene

text: V3, V4

characteristic: target subfragment

text: Crete soil metagenome

characteristic: total nitrogen

text: DOI: 10.1080/0010362930936892

characteristic: total nitrogen method

characteristic: total organic C method

characteristic: total organic carbon

text: lowland

characteristic: vegetation zone

characteristic: water content

characteristic: water content method


characteristic: DNA concentration

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: amount or size of sample collected

characteristic: collection date

text: soil metagenome

characteristic: common name

text: shrub land; crop trees

characteristic: current land use (emp 500 soil)

text: metagenome from Crete soil

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: microcontinental island

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Greece

characteristic: geographic location (country and/or sea)

text: 5 cm

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Crete, Heraklion

characteristic: geographic location (region and locality)

text: metagenome

characteristic: investigation type

text: soil metagenome

characteristic: organism

characteristic: pcr primers

text: parking lot Agiofaraggo Gorge

text: 15x2.2 cm metal soil core sampler

characteristic: sample collection device or method

text: soil metagenome

text: Illumina HiSeq 2500

text: soil

text: 16S rRNA

text: V3, V4

text: Crete soil metagenome

characteristic: title

text: DOI: 10.1080/0010362930936892

text: lowland


characteristic: DNA concentration

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: amount or size of sample collected

characteristic: collection date

text: soil metagenome

characteristic: common name

text: shrub land

text: metagenome from Crete soil

text: terrestrial biome

text: microcontinental island

text: soil

text: Greece

text: 5 cm

text: Crete, Heraklion

text: metagenome

text: soil metagenome

text: Agiofaraggo Gorge

characteristic: place name

characteristic: project name

text: 15x2.2 cm metal soil core sampler

characteristic: sample volume or weight for DNA extraction

text: soil metagenome

text: Illumina HiSeq 2500

characteristic: sequencing method

text: soil

characteristic: soil environmental package

characteristic: source material identifiers

characteristic: storage conditions (fresh/frozen/other)

text: 16S rRNA

characteristic: target gene

text: V3, V4

characteristic: target subfragment

text: Crete soil metagenome

characteristic: total nitrogen

text: DOI: 10.1080/0010362930936892

characteristic: total nitrogen method

characteristic: total organic C method

characteristic: total organic carbon

text: lowland

characteristic: vegetation zone

characteristic: water content

characteristic: water content method


characteristic: DNA concentration

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: amount or size of sample collected

characteristic: collection date

text: soil metagenome

characteristic: common name

text: shrub land; crop trees

characteristic: current land use (emp 500 soil)

text: metagenome from Crete soil

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: microcontinental island

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Greece

characteristic: geographic location (country and/or sea)

text: 5 cm

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Crete, Heraklion

characteristic: geographic location (region and locality)

text: metagenome

characteristic: investigation type

text: soil metagenome

characteristic: organism

characteristic: pcr primers

text: hillock in gorge Agiofaraggo Gorge

text: 15x2.2 cm metal soil core sampler

characteristic: sample collection device or method

text: soil metagenome

text: Illumina HiSeq 2500

text: soil

text: 16S rRNA

text: V3, V4

text: Crete soil metagenome

characteristic: title

text: DOI: 10.1080/0010362930936892

text: lowland


characteristic: DNA concentration

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: amount or size of sample collected

characteristic: collection date

text: soil metagenome

characteristic: common name

text: shrub land; crop trees

text: metagenome from Crete soil

text: terrestrial biome

text: microcontinental island

text: soil

text: Greece

text: 5 cm

text: Crete, Heraklion

text: metagenome

text: soil metagenome

text: Agiofaraggo Gorge

characteristic: place name

characteristic: project name

text: 15x2.2 cm metal soil core sampler

characteristic: sample volume or weight for DNA extraction

text: soil metagenome

text: Illumina HiSeq 2500

characteristic: sequencing method

text: soil

characteristic: soil environmental package

characteristic: source material identifiers

characteristic: storage conditions (fresh/frozen/other)

text: 16S rRNA

characteristic: target gene

text: V3, V4

characteristic: target subfragment

text: Crete soil metagenome

characteristic: total nitrogen

text: DOI: 10.1080/0010362930936892

characteristic: total nitrogen method

characteristic: total organic C method

characteristic: total organic carbon

text: lowland

characteristic: vegetation zone

characteristic: water content

characteristic: water content method


characteristic: DNA concentration

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: amount or size of sample collected

characteristic: collection date

text: soil metagenome

characteristic: common name

text: vine crops

characteristic: current land use (emp 500 soil)

text: metagenome from Crete soil

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: microcontinental island

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Greece

characteristic: geographic location (country and/or sea)

text: 5 cm

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Crete, Heraklion

characteristic: geographic location (region and locality)

text: metagenome

characteristic: investigation type

text: soil metagenome

characteristic: organism

characteristic: pcr primers

text: Pitsidia to Comos

text: 15x2.2 cm metal soil core sampler

characteristic: sample collection device or method

text: soil metagenome

text: Illumina HiSeq 2500

text: soil

text: 16S rRNA

text: V3, V4

text: Crete soil metagenome

characteristic: title

text: DOI: 10.1080/0010362930936892

text: lowland


characteristic: DNA concentration

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: amount or size of sample collected

characteristic: collection date

text: soil metagenome

characteristic: common name

text: sand; road

text: metagenome from Crete soil

text: terrestrial biome

text: microcontinental island

text: soil

text: Greece

text: 5 cm

text: Crete, Rethimno

text: metagenome

text: soil metagenome

text: Spilies Beach/Geropotamos

characteristic: place name

characteristic: project name

text: 15x2.2 cm metal soil core sampler

characteristic: sample volume or weight for DNA extraction

text: soil metagenome

text: Illumina HiSeq 2500

characteristic: sequencing method

text: soil

characteristic: soil environmental package

characteristic: source material identifiers

characteristic: storage conditions (fresh/frozen/other)

text: 16S rRNA

characteristic: target gene

text: V3, V4

characteristic: target subfragment

text: Crete soil metagenome

characteristic: total nitrogen

text: DOI: 10.1080/0010362930936892

characteristic: total nitrogen method

characteristic: total organic C method

characteristic: total organic carbon

text: coastal and littoral

characteristic: vegetation zone

characteristic: water content

characteristic: water content method


characteristic: DNA concentration

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: amount or size of sample collected

characteristic: collection date

text: soil metagenome

characteristic: common name

text: hardwood; shrubland; road

characteristic: current land use (emp 500 soil)

text: metagenome from Crete soil

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: microcontinental island

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Greece

characteristic: geographic location (country and/or sea)

text: 5 cm

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Crete, Rethimno

characteristic: geographic location (region and locality)

text: metagenome

characteristic: investigation type

text: soil metagenome

characteristic: organism

characteristic: pcr primers

text: Armenoi

text: 15x2.2 cm metal soil core sampler

characteristic: sample collection device or method

text: soil metagenome

text: Illumina HiSeq 2500

text: soil

text: 16S rRNA

text: V3, V4

text: Crete soil metagenome

characteristic: title

text: DOI: 10.1080/0010362930936892

text: sub-mountainous


characteristic: DNA concentration

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: amount or size of sample collected

characteristic: collection date

text: soil metagenome

characteristic: common name

text: meadow

text: metagenome from Crete soil

text: terrestrial biome

text: microcontinental island

text: soil

text: Greece

text: 5 cm

text: Crete, Rethimno

text: metagenome

text: soil metagenome

text: Spili

characteristic: place name

characteristic: project name

text: 15x2.2 cm metal soil core sampler

characteristic: sample volume or weight for DNA extraction

text: soil metagenome

text: Illumina HiSeq 2500

characteristic: sequencing method

text: soil

characteristic: soil environmental package

characteristic: source material identifiers

characteristic: storage conditions (fresh/frozen/other)

text: 16S rRNA

characteristic: target gene

text: V3, V4

characteristic: target subfragment

text: Crete soil metagenome

characteristic: total nitrogen

text: DOI: 10.1080/0010362930936892

characteristic: total nitrogen method

characteristic: total organic C method

characteristic: total organic carbon

text: sub-mountainous

characteristic: vegetation zone

characteristic: water content

characteristic: water content method


characteristic: DNA concentration

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: amount or size of sample collected

characteristic: collection date

text: soil metagenome

characteristic: common name

text: hardwood; road

characteristic: current land use (emp 500 soil)

text: metagenome from Crete soil

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: microcontinental island

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Greece

characteristic: geographic location (country and/or sea)

text: 5 cm

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Crete, Rethimno

characteristic: geographic location (region and locality)

text: metagenome

characteristic: investigation type

text: soil metagenome

characteristic: organism

characteristic: pcr primers

text: Gerakari

text: 15x2.2 cm metal soil core sampler

characteristic: sample collection device or method

text: soil metagenome

text: Illumina HiSeq 2500

text: soil

text: 16S rRNA

text: V3, V4

text: Crete soil metagenome

characteristic: title

text: DOI: 10.1080/0010362930936892

text: sub-mountainous


characteristic: DNA concentration

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: amount or size of sample collected

characteristic: collection date

text: soil metagenome

characteristic: common name

text: sand

text: metagenome from Crete soil

text: terrestrial biome

text: microcontinental island

text: soil

text: Greece

text: 5 cm

text: Crete, Rethimno

text: metagenome

text: soil metagenome

text: Schinaria

characteristic: place name

characteristic: project name

text: 15x2.2 cm metal soil core sampler

characteristic: sample volume or weight for DNA extraction

text: soil metagenome

text: Illumina HiSeq 2500

characteristic: sequencing method

text: soil

characteristic: soil environmental package

characteristic: source material identifiers

characteristic: storage conditions (fresh/frozen/other)

text: 16S rRNA

characteristic: target gene

text: V3, V4

characteristic: target subfragment

text: Crete soil metagenome

characteristic: total nitrogen

text: DOI: 10.1080/0010362930936892

characteristic: total nitrogen method

characteristic: total organic C method

characteristic: total organic carbon

text: coastal and littoral

characteristic: vegetation zone

characteristic: water content

characteristic: water content method


characteristic: DNA concentration

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: amount or size of sample collected

characteristic: collection date

text: soil metagenome

characteristic: common name

text: sand; shrub land

characteristic: current land use (emp 500 soil)

text: metagenome from Crete soil

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: microcontinental island

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Greece

characteristic: geographic location (country and/or sea)

text: 5 cm

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Crete, Rethimno

characteristic: geographic location (region and locality)

text: metagenome

characteristic: investigation type

text: soil metagenome

characteristic: organism

characteristic: pcr primers

text: Schinaria

text: 15x2.2 cm metal soil core sampler

characteristic: sample collection device or method

text: soil metagenome

text: Illumina HiSeq 2500

text: soil

text: 16S rRNA

text: V3, V4

text: Crete soil metagenome

characteristic: title

text: DOI: 10.1080/0010362930936892

text: coastal and littoral


characteristic: DNA concentration

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: amount or size of sample collected

characteristic: collection date

text: soil metagenome

characteristic: common name

text: road; pastureland

text: metagenome from Crete soil

text: terrestrial biome

text: microcontinental island

text: soil

text: Greece

text: 5 cm

text: Crete, Rethimno

text: metagenome

text: soil metagenome

text: Kamaraki

characteristic: place name

characteristic: project name

text: 15x2.2 cm metal soil core sampler

characteristic: sample volume or weight for DNA extraction

text: soil metagenome

text: Illumina HiSeq 2500

characteristic: sequencing method

text: soil

characteristic: soil environmental package

characteristic: source material identifiers

characteristic: storage conditions (fresh/frozen/other)

text: 16S rRNA

characteristic: target gene

text: V3, V4

characteristic: target subfragment

text: Crete soil metagenome

characteristic: total nitrogen

text: DOI: 10.1080/0010362930936892

characteristic: total nitrogen method

characteristic: total organic C method

characteristic: total organic carbon

text: sub-mountainous

characteristic: vegetation zone

characteristic: water content

characteristic: water content method


characteristic: DNA concentration

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: amount or size of sample collected

characteristic: collection date

text: soil metagenome

characteristic: common name

text: shrub land

characteristic: current land use (emp 500 soil)

text: metagenome from Crete soil

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: microcontinental island

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Greece

characteristic: geographic location (country and/or sea)

text: 5 cm

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Crete, Rethimno

characteristic: geographic location (region and locality)

text: metagenome

characteristic: investigation type

text: soil metagenome

characteristic: organism

characteristic: pcr primers

text: Lakos of Migero (up)

text: 15x2.2 cm metal soil core sampler

characteristic: sample collection device or method

text: soil metagenome

text: Illumina HiSeq 2500

text: soil

text: 16S rRNA

text: V3, V4

text: Crete soil metagenome

characteristic: title

text: DOI: 10.1080/0010362930936892

text: mountainous


characteristic: DNA concentration

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: amount or size of sample collected

characteristic: collection date

text: soil metagenome

characteristic: common name

text: shrub land

text: metagenome from Crete soil

text: terrestrial biome

text: microcontinental island

text: soil

text: Greece

text: 5 cm

text: Crete, Rethimno

text: metagenome

text: soil metagenome

text: Lakos of Migero

characteristic: place name

characteristic: project name

text: 15x2.2 cm metal soil core sampler

characteristic: sample volume or weight for DNA extraction

text: soil metagenome

text: Illumina HiSeq 2500

characteristic: sequencing method

text: soil

characteristic: soil environmental package

characteristic: source material identifiers

characteristic: storage conditions (fresh/frozen/other)

text: 16S rRNA

characteristic: target gene

text: V3, V4

characteristic: target subfragment

text: Crete soil metagenome

characteristic: total nitrogen

text: DOI: 10.1080/0010362930936892

characteristic: total nitrogen method

characteristic: total organic C method

characteristic: total organic carbon

text: mountainous

characteristic: vegetation zone

characteristic: water content

characteristic: water content method


characteristic: DNA concentration

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: amount or size of sample collected

characteristic: collection date

text: soil metagenome

characteristic: common name

text: sand

characteristic: current land use (emp 500 soil)

text: metagenome from Crete soil

characteristic: description

text: terrestrial biome

characteristic: environment (biome)

text: microcontinental island

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Greece

characteristic: geographic location (country and/or sea)

text: 5 cm

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Crete, Lassithi

characteristic: geographic location (region and locality)

text: metagenome

characteristic: investigation type

text: soil metagenome

characteristic: organism

characteristic: pcr primers

text: Katsounaki

text: 15x2.2 cm metal soil core sampler

characteristic: sample collection device or method

text: soil metagenome

text: Illumina HiSeq 2500

text: soil

text: 16S rRNA

text: V3, V4

text: Crete soil metagenome

characteristic: title

text: DOI: 10.1080/0010362930936892

text: coastal and littoral


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Wellcome Sanger Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Wellcome Sanger Institute

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: M

characteristic: cell gating

text: 6 to 12 weeks gestation

characteristic: clinical information

text: human

characteristic: common name

text: Protocols: Placental and decidual tissue for immunohistochemistry were obtained from elective terminations of normal pregnancies at Addenbrooke’s Hospital between 6 and 12 weeks gestation. Decidual and placental tissue were washed in HAMS F12 medium, macroscopically separated and then washed for at least 10 mins in RPMI or HAMS F12 medium respectively before processing. Decidual tissues were chopped using scalpels into approximately 0.2 mm3 cubes and enzymatically digested in 15ml 0.4mg/mL collagenase V (Sigma, C-9263) solution in RPMI 1640 medium (ThermoFisher Scientific, 21875-034)/10% FCS (Biosfera, FB-1001) at 37°C for 45 min. The supernatant was diluted with medium and passed through 100um cell sieve (Corning, 431752) and then 40um cell sieve (Corning, 431750). The flow-through was centrifuged and resuspended in 5ml of red blood cell lysis buffer (Invitrogen, 00-4300) for 10min. Each first trimester placenta was placed in a petri dish and the placental villi were scraped from the chorionic membrane using a scalpel. The stripped membrane was discarded and the resultant villous tissue was enzymatically digested in 70 ml 0.2% trypsin 250 (Pan Biotech P10-025100P)/0.02% EDTA (Sigma E9884) in PBS with stirring at 37°c for 9 min. The disaggregated cell suspension was passed through sterile muslin gauze (Winware food grade) and washed through with Hams F12 medium (Biosera SM-H0096) containing 20% FBS (Biosera FB-1001). Cells were pelleted from the filtrate by centrifugation and re-suspended in Hams F12. The undigested, gelatinous tissue remnant was retrieved from the gauze and further digested with 10-15 ml collagenase V at 1.0mg/ml (Sigma C9263) in Hams F12 medium/10% FBS with gentle shaking at 37°C for 10 min. The disaggregated cell suspension from collagenase digestion was passed through sterile muslin gauze and the cells pelleted from the filtrate as before. Cells obtained from both enzyme digests were pooled together and passed through 100um cell sieve (Corning, 431752) and washed in Hams F12. The flow-through was centrifuged and resuspended in 5ml of red blood cell lysis buffer (Invitrogen, 00-4300) for 10min. Decidual and blood cells were incubated at 4°C with 2.5ul of antibodies in 1% FBS in DPBS without Calcium and Magnesium (ThermoFisher Scientific, 14190136). DAPI was used for live/dead discrimination. We used an antibody panel designed to enrich for certain population for single-cell sorting and single-cell RNA sequencing (scRNA-seq). Cells were sorted using a Becton Dickinson (BD) FACS Aria Fusion with 5 excitation lasers (355nm, 405nm, 488nm, 561nm and 635nm Red), and 18 fluorescent detectors plus forward and side scatter. The sorter was controlled using BD FACS DIVA software (version 7). For single-cell RNA-seq using the plate-based SS2 protocol, we created overlapping gates that comprehensively and evenly sampled all immune cell population in the decidua. B cells (CD19+ /or CD20+) cells were excluded from our analysis, due to its absence in decidua. Single cells were sorted into 96-well full-skirted Eppendorf plated chilled to 4C, prepared with lysis buffer consisting of 10 ul of TCL buffer (Qiagen) supplemented with 1% b-mercaptoethanol. Single-cell lysates were sealed, vortexed, spin down at 300g at 4C for 1 min, immediately placed on dry ice, and transferred for storage at -80C. The SS2 protocol was performed on single-cells as described previously, with some modifications. Libraries were sequenced aiming at an average depth of 1 million reads/cell, on an Illumina HiSeq 2000 with v4 chemistry (paired-end 75-bp reads). RNA was extracted, cDNA created and amplified, as part of the smart-seq 2 protocol. Libraries were made using Nextera XT

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: decidua

characteristic: organism part

text: Homo sapiens

text: female

characteristic: sex


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Wellcome Sanger Institute

text: public

text: ArrayExpress

text: T

text: 6 to 12 weeks gestation

text: human

characteristic: description

text: adult

text: normal

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: decidua

text: Homo sapiens

text: female

characteristic: title


characteristic: External Id

text: Wellcome Sanger Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ArrayExpress

text: 6 to 12 weeks gestation

text: human

text: adult

text: normal

text: Homo sapiens

text: Homo sapiens

text: decidua

text: Homo sapiens

text: female


text: Wellcome Sanger Institute

text: public

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: NK

characteristic: cell gating

text: 6 to 12 weeks gestation

characteristic: clinical information

text: human

characteristic: common name

text: adult

characteristic: developmental stage

text: normal

text: Homo sapiens

text: Homo sapiens

text: decidua

text: Homo sapiens

text: female


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Wellcome Sanger Institute

text: public

text: ArrayExpress

text: 6 to 12 weeks gestation

text: human

text: adult

text: normal

characteristic: disease

text: not available

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: decidua

characteristic: organism part

text: Homo sapiens

text: female

characteristic: sex


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Wellcome Sanger Institute

characteristic: INSDC center name

text: public

text: ArrayExpress

text: 6 to 12 weeks gestation

text: human

characteristic: description

text: adult

text: normal

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: decidua

text: Homo sapiens

text: female

characteristic: title


text: Universita' degli Studi di Milano

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Universita' degli Studi di Milano

characteristic: Submitter Id

text: Sara Rimoldi (sara.rimoldi@asst-fbf-sacco.it)

characteristic: collected by

characteristic: collection date

text: No

characteristic: environmental sample

text: Italy

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae - harboring VIM-1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

tag: Namespace:Laboratory of translational research. Azienda USL-IRCCS Reggio Emilia Italy

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: epithelial cell

characteristic: cell type

text: human

characteristic: common name

text: Protocols: Cells were treated with LNA gapmer oligonucleotides at 25 nanomolar either against the long non-coding RNA RAIN or negative control antisense oligonucleotides. Cells collected 48h after reverse transfection. Long non-coding RAIN was described by Sancisi et al. in: RUNX2 expression in thyroid and breast cancer requires the cooperation of three non-redundant enhancers under the control of BRD4 and c-JUN. Nucleic Acids Res. 2017 doi: 10.1093/nar/gkx802. Genebank sequence IDs: MH084478 - MH084485 RNA was extracted using Qiagen RNAeasy collection kit Library were prepared using Truseq Stranded mRNA sample preparation kit (Illumina) starting from 1 microgram of total RNA

characteristic: description

text: papillary thyroid carcinoma

characteristic: disease

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: thyroid gland

characteristic: organism part

text: LNA gapmer against long non-coding RNA-RAIN

characteristic: rna interference

text: Homo sapiens


text: Laboratory of translational research. Azienda USL-IRCCS Reggio Emilia Italy

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: epithelial cell

text: human

text: papillary thyroid carcinoma

text: Homo sapiens

text: Homo sapiens

text: thyroid gland

text: Homo sapiens

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: ArrayExpress

text: epithelial cell

text: human

text: papillary thyroid carcinoma

text: Homo sapiens

text: Homo sapiens

text: thyroid gland

text: negative control antisense LNA

text: Homo sapiens


characteristic: INSDC center name

text: public

tag: Namespace:Centre for Discovery Brain Sciences, University of Edinburgh

text: ArrayExpress

characteristic: broker name

text: Protocols: Rat microglia: to prepare rat microglia, on experimental day 1 10-12 wild-type Sprague-Dawley rat pups (mixed gender) of postnatal day 0-2 were decapitated. Their cortices were then dissected under a microscope and dissociated first chemically with papain solution and then mechanically with 5 ml pipettes. The cell suspension was then plated down in DMEM medium in poly-D-lysine coated T75 plates and grown at 37°C for 10-14 days. Human astrocytes: On day 2, primary human astrocytes (purchased from Caltag Medsystems, catalogue no. SC1800, which had been isolated from the cerebral cortex, and were negative for HIV-1, HBV, HCV, mycoplasma, bacteria, yeast, and fungi) were recovered from liquid nitrogen, plated down in human astrocyte medium first in a T75 flask and then split into 24-well plates the next day. They were then left to grow for 1-3 days until 80-90% confluency. Mouse neurons: One day 4 or 5, wild type CD1 mouse embryos (mixed gender) of day 17.5 were decapitated and cortices were dissected and dissociated as above and 9-13 X 104 cells (in NBA medium with 1% serum) per well were plated down on top of the human astrocytes prepared earlier. The neuron-astrocyte co-culture was left to grow for a further 3-4 days. On day 11 or 12, the rat microglia were harvested by shaking in an orbital shaker and plated down in NBA medium without serum on top of either neurons, astrocytes, or the neuron-astrocyte co-culture and were left to grow for 3 days. Single-species (rat) monocultures of microglia, or tri-cultures of microglia, neurons and astrocytes, were prepared according to the same protocol. After 3 days of co-culture, the medium was replaced with Tmo for two hours. 500 ng LPS was then added to the cells for 12-16 hours. RNA was harvested using a Roche RNA isolation Kit according to standard protocol and the quality of total RNA (RIN) was confirmed on RNA 6000 Nano Chips and an Agilent 2100 Bioanalyzer following the manufacturer’s instructions. RNA-seq libraries were prepared by Edinburgh Genomics using the Illumina TruSeq stranded mRNA-seq kit, according to the manufacturer’s protocol (Illumina).

text: tri-culture between rat neurons, rat microglia and rat astrocytes

characteristic: growth condition

text: mixed sample

text: mixed sample

text: mixed sample


text: Centre for Discovery Brain Sciences, University of Edinburgh

text: public

text: ArrayExpress

characteristic: description

text: mixed sample

text: mixed sample

text: mixed sample


text: public

text: ArrayExpress

text: monoculture of rat microglia

text: mixed sample

characteristic: organism

text: mixed sample

text: mixed sample


text: LUMC

text: public

text: ArrayExpress

text: immortalized cell line

characteristic: cell line

text: epithelial cell of proximal tubule

characteristic: cell type

text: house mouse

characteristic: common name

text: Protocols: Pkd1-/- proximal tubular epithelial cells (PTECs) were exposed to laminar fluid shear stress (1.9 dyn/cm2) in a cone-plate device. The cone-plate device was designed for 3.5 cm cell culture dishes (Greiner Bio-One). Cells were grown on collagen-I (Advanced BioMatrix; #5005) coated dishes until confluence, followed by 24 hr serum starvation, before the start of the treatment to exclude effects of serum-derived growth-factors and to synchronize cells and cilia formation. Culture dishes were placed in the cone-plate flow system and incubated at 37°C and 5% CO2. The confluent cell monolayer of 9.6 cm2 was subjected to constant laminar (Re = 0.3) fluid shear stress for 6 hours, using 2 ml serum-free DMEM/F-12 medium containing penicillin-streptomycin, with viscosity (μ) of 0.0078 dyn s/cm2, a cone with an angle (α) of 2° and a velocity (ω) of 80 rpm, generating a fluid shear stress (τ = μω/α) of 1.9 dyn/cm2. Static control cells were incubated for the same time in equal amounts of serum-free DMEM/F12 medium containing penicillin-streptomycin at 37°C and 5% CO2. Total RNA was isolated from fluid shear stress treated Pkd1-/- PTECs or static controls (n = 4) using TRI Reagent (Sigma-Aldrich; #T9424) and purified using Nucleospin RNA Clean-up (Macherey-Nagel; #740948) according to manufacturer’s protocols. Illumina mRNA-Seq Sample Prep Kit was used to process the samples according to the manufacturer’s protocol. Briefly, mRNA was isolated from total RNA using the oligo-dT magnetic beads. After fragmentation of the mRNA, a cDNA synthesis was performed. This was used for ligation with the sequencing adapters and PCR amplification of the resulting product. The quality and yield after sample preparation was measured with a DNA 1000 Lab-on-a-Chip. The size of the resulting products was consistent with expected size distribution (a broad peak between 300-500 bp).

text: normal

characteristic: disease

text: Pkd1 homozygous knockout

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: kidney

characteristic: organism part

text: Mus musculus

text: shear stressing

characteristic: stimulus


text: LUMC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: immortalized cell line

text: epithelial cell of proximal tubule

text: house mouse

text: normal

text: Pkd1 homozygous knockout

text: Mus musculus

text: Mus musculus

text: kidney

text: Mus musculus

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LUMC

characteristic: INSDC center name

text: public

text: ArrayExpress

characteristic: broker name

text: immortalized cell line

text: epithelial cell of proximal tubule

text: house mouse

text: Protocols: Proximal tubular epithelial cells (PTECs) were exposed to laminar fluid shear stress (1.9 dyn/cm2) in a cone-plate device. The cone-plate device was designed for 3.5 cm cell culture dishes (Greiner Bio-One). Cells were grown on collagen-I (Advanced BioMatrix; #5005) coated dishes until confluence, followed by 24 hr serum starvation, before the start of the treatment to exclude effects of serum-derived growth-factors and to synchronize cells and cilia formation. Culture dishes were placed in the cone-plate flow system and incubated at 37°C and 5% CO2. The confluent cell monolayer of 9.6 cm2 was subjected to constant laminar (Re = 0.3) fluid shear stress for 6 hours, using 2 ml serum-free DMEM/F-12 medium containing penicillin-streptomycin, with viscosity (μ) of 0.0078 dyn s/cm2, a cone with an angle (α) of 2° and a velocity (ω) of 80 rpm, generating a fluid shear stress (τ = μω/α) of 1.9 dyn/cm2. Static control cells were incubated for the same time in equal amounts of serum-free DMEM/F12 medium containing penicillin-streptomycin at 37°C and 5% CO2. Total RNA was isolated from fluid shear stress treated PTECs or static controls (n = 4) using TRI Reagent (Sigma-Aldrich; #T9424) and purified using Nucleospin RNA Clean-up (Macherey-Nagel; #740948) according to manufacturer’s protocols. Illumina mRNA-Seq Sample Prep Kit was used to process the samples according to the manufacturer’s protocol. Briefly, mRNA was isolated from total RNA using the oligo-dT magnetic beads. After fragmentation of the mRNA, a cDNA synthesis was performed. This was used for ligation with the sequencing adapters and PCR amplification of the resulting product. The quality and yield after sample preparation was measured with a DNA 1000 Lab-on-a-Chip. The size of the resulting products was consistent with expected size distribution (a broad peak between 300-500 bp).

text: normal

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: kidney

text: Mus musculus

text: shear stressing


text: LUMC

text: public

text: ArrayExpress

text: immortalized cell line

characteristic: cell line

text: epithelial cell of proximal tubule

characteristic: cell type

text: house mouse

characteristic: common name

characteristic: description

text: normal

text: wild type genotype

text: Mus musculus

characteristic: organism

text: Mus musculus

text: kidney

text: Mus musculus


Control Powder

text: TEAGASC

characteristic: INSDC first public

text: public

text: Control Powder

characteristic: collection date

text: Dietary supplement powder

characteristic: environment (biome)

text: Nutrition

characteristic: environment (feature)

text: powder

characteristic: environment (material)

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-associated

characteristic: human associated environmental package

text: metagenome

characteristic: investigation type

text: food metagenome

text: ExMET

characteristic: project name

text: food metagenome

text: Shotgun Metagenomic

characteristic: sequencing method

text: Powder analysis


Whey Powder

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: TEAGASC

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Whey Powder

characteristic: Submitter Id

text: Dietary supplement powder

text: Nutrition

text: powder

text: Ireland

text: human-associated

text: metagenome

text: food metagenome

text: ExMET

text: food metagenome

text: Shotgun Metagenomic

text: Powder analysis

characteristic: title


text: STOCKHOLM UNIVERSITY

characteristic: INSDC first public

text: public

tag: Namespace:STOCKHOLM UNIVERSITY

text: human

characteristic: common name

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Ancient Human Genome


text: STOCKHOLM UNIVERSITY

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Ancient human genome


E-MTAB-6643:Sample 2

text: public

text: E-MTAB-6643:Sample 2

tag: Namespace:Charles University in Prague Faculty of Science Department of Cell Biology

text: 25 to 40

unit: year

characteristic: age

text: ArrayExpress

characteristic: broker name

text: alternatively activated macrophage

characteristic: cell type

text: human

text: Protocols: Five million M2 macrophages were cultured in a 500 μl three-dimensional gel made of bovine skin collagen (Nutragen, Advanced BioMatrix, 1.7 or 4.8 mg/ml) in RPMI-1640 with 1% fetal bovine serum and 100 ng/ml M-CSF (Peprotech) for 48 hours in a 24-well plate. Gels from two wells were transferred into one 2 ml tube and homogenized with Tissue Tearor (BioSpec Products) in 600 μl of RNA extraction solution (60% v/v water-saturated phenol, 3.25 M guanidine thiocyanate, 400 mM sodium acetate buffer pH 4.0, 0.4% w/v N-lauroylsarcosine, 160 mM 2-mercaptoethanol) plus 100 μl of 6 M sodium chloride. Primary human macrophages derived from CD14+ subpopulation of peripheral blood mononuclear cells from healthy donors were differentiated and M2-polarized with M-CSF (100 ng/ml) in RPMI-1640 medium supplemented with 10% fetal bovine serum for 5 - 6 days before the experiments. 200 μl of chlorophorm was added to approx. 1 ml of the lysate and the mixture was vortexed vigorously for 10 seconds. After 30-minute centrifugation at 18,000 g at 4°C, the polar upper phase was transferred to a new tube, volume adjusted to 800 μl with RNase-free water, RNA was precipitated with 600 μl of isopropanol at -20°C overnight and recovered by centrifugation at 18,000 g for 30 minutes. The RNA pellet was washed three times with 600 μl of 75% ethanol and air-dried. Next, the RNA was treated with DNAse I to remove possible genomic DNA contamination. To this end, the pellet was directly dissolved in 100 μl of solution containing 4 units of DNAse I (Thermo Fisher Scientific) in manufacturer-provided reaction buffer and incubated at 37°C for 30 minutes. After that, the RNA was re-purified with RNeasy Protect Mini Kit (Qiagen) according to the manufacturer’s instructions and eluted in 50 μl of RNase-free water. Stranded, Illumina HiSeq-compatible library was constructed with ScriptSeq Complete (Human/Mouse/Rat) library preparation kit (Epicentre) according to the manufacturer’s instructions.

characteristic: description

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: high concentration bovine skin collagen; 4.8 milligram per milliliter

characteristic: growth condition

text: A

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

characteristic: sex

text: Sample 2


E-MTAB-6643:Sample 4

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Charles University in Prague Faculty of Science Department of Cell Biology

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-6643:Sample 4

text: 25 to 40

text: ArrayExpress

text: alternatively activated macrophage

text: human

text: adult

text: normal

text: B

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

text: Sample 4


E-MTAB-6643:Sample 6

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: E-MTAB-6643:Sample 6

characteristic: Submitter Id

text: 25 to 40

characteristic: age

text: ArrayExpress

text: alternatively activated macrophage

text: human

characteristic: common name

text: adult

text: normal

text: C

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: Sample 6

characteristic: title


E-MTAB-6643:Sample 1

text: public

text: E-MTAB-6643:Sample 1

text: 25 to 40

text: ArrayExpress

characteristic: broker name

text: alternatively activated macrophage

characteristic: cell type

text: human

characteristic: description

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: low concentration bovine skin collagen; 1.7 milligram per milliliter

characteristic: growth condition

text: A

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: Sample 1


E-MTAB-6643:Sample 3

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-6643:Sample 3

text: 25 to 40

text: ArrayExpress

text: alternatively activated macrophage

text: human

text: adult

text: normal

text: B

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: female

characteristic: sex

text: Sample 3


E-MTAB-6643:Sample 5

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6643:Sample 5

characteristic: Submitter Id

text: 25 to 40

characteristic: age

text: ArrayExpress

text: alternatively activated macrophage

text: human

characteristic: common name

text: adult

text: normal

text: C

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: Sample 5


text: public

tag: Namespace:Department of Biology and Biological Engineering, Chalmers University of Technology, Gothenburg, SE-41296, Sweden

text: ArrayExpress

characteristic: broker name

text: baker's yeast

text: Protocols: 10OD of cells were collected, pelleted and snap frozen in liquid nitrogen. The S. cerevisiae strain CEN.PK113-7D was pre-cultured in a batch culture in Delft media with 2% glucose at 30°C and 200 rpm in shake flasks and then transferred to the chemostats in duplicates. Four different media compositions with a limitation in a different nutrient were employed in the chemostat runs. The temperature was also set to 30°C. The dilution rate was fixed to 0.1 and the cells were grown for 4 days to achieve stable cell numbers in the culture. RNA was extracted using the RNeasy® Mini Kit from QIAGEN. Cells were mechanically disrupted using a FastPrep®-24 from MPbio in combination with the lysing matrix tubes type C from MPbio. The FastPrep was run 3 times for 20 seconds with 4.0m/s settings and a 5 minute break in between each run. RNA quality was assessed using NanoDrop and Bioanalyzer. The non-amplification non-tagging CAGE protocol for Illumina sequencing (nAnT-iCAGE) as previously published by Murata et. al. 2014 was used on two biological replicates of each condition, starting with 5 micrograms of extracted RNA.

characteristic: description

text: wild type genotype

characteristic: genotype

text: Delft media with 2 percent glucose

text: Saccharomyces cerevisiae

characteristic: organism

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

characteristic: strain

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Department of Biology and Biological Engineering, Chalmers University of Technology, Gothenburg, SE-41296, Sweden

text: public

text: ArrayExpress

text: baker's yeast

text: wild type genotype

text: Delft media with 2 percent glucose

characteristic: growth condition

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Plasmodium vivax

characteristic: ArrayExpress-SPECIES

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: malaria parasite P. vivax

text: Plasmodium vivax

text: Plasmodium vivax

characteristic: subject id


text: CIRAD

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: fields of culture

characteristic: forest edge

text: Cameroon

characteristic: geographic location (country)

text: ipono-Campo

characteristic: geographic location (locality area)

text: Campo

characteristic: geographic location (locality)

characteristic: house

text: Uninfected

characteristic: infection

characteristic: latitude

characteristic: longitude

characteristic: mixed

characteristic: ntem edge

text: Glossina palpalis palpalis

text: Glossina palpalis palpalis

text: F

characteristic: sex

characteristic: swamp

characteristic: tcf

characteristic: tcs

characteristic: track edge

characteristic: water point


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CIRAD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: fields of culture

text: Cameroon

text: ipono-Campo

text: Campo

text: Mixed

text: Glossina palpalis palpalis

characteristic: organism

text: Glossina palpalis palpalis

text: F

characteristic: title


text: CIRAD

text: public

characteristic: forest edge

text: Cameroon

characteristic: geographic location (country)

text: Ebimimbang-Bipindi

characteristic: geographic location (locality area)

text: Bipindi

characteristic: geographic location (locality)

characteristic: house

text: Uninfected

characteristic: infection

characteristic: latitude

characteristic: longitude

characteristic: mixed

characteristic: ntem edge

text: Glossina palpalis palpalis

text: Glossina palpalis palpalis

text: F

characteristic: sex

characteristic: swamp

characteristic: tcf