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text: mimarks-survey

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text: SO245 On-board Sequencing and Data Analysis. MPG funded research project.

text: marine metagenome

text: Ion Torrent PGM

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text: GFBIO

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text: marine metagenome

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text: GFBIO

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text: marine metagenome

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characteristic: environment (feature)

characteristic: environment (material)

text: water

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text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

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characteristic: geographic location (latitude)

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text: mimarks-survey

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characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

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characteristic: External Id

text: GFBIO

characteristic: INSDC center name

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text: public

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characteristic: SRA accession

text: 5065:8816016b-ad0d-478c-8d45-7c7f1ead80f1

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text: mimarks-survey

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text: marine metagenome

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text: water


text: GFBIO

text: public

text: 5064:8816016b-ad0d-478c-8d45-7c7f1ead80f1

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characteristic: environment (biome)

characteristic: environment (feature)

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text: water

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text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

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characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: marine metagenome

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text: true

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text: 16S rRNA

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text: water


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characteristic: ENA-FIRST-PUBLIC

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characteristic: External Id

text: GFBIO

characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

text: 5063:8816016b-ad0d-478c-8d45-7c7f1ead80f1

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text: GFBIO

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text: marine metagenome

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text: oceanic epipelagic zone biome [ENVO:01000035]

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characteristic: geographic location (longitude)

text: mimarks-survey

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text: water


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text: oceanic zone [ENVO:01000033]|oceanic gyre [ENVO:01000074]

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text: 16s rRNA tag sequencing data from samples taken throughout the water column (20 - 5000m depth) along the SO245 Ultrapac cruise which crossed through the South Pacific Gyre. Samples were samples from a CTD and directly filtered on 0,2µm polycarbondate filters. DNA extraction, PCR, sequencing and data analysis were all carried out on-board directly after sampling. Samples were not frozen at any time.

characteristic: environment (biome)

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text: water

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text: Atlantic Ocean

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text: mimarks-survey

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text: water

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text: sea water [ENVO:00002149]|oligotrophic water [ENVO:00002223]

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characteristic: environment (biome)

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text: GFBIO

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characteristic: environment (biome)

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