Frog histone reconstitute MNase

text: SRA-Webin

text: ED

text: public

text: Frog histone reconstitute MNase

text: Two plasmid DNAs were employed: pBLG (BLG) comprised 10,841 bp of ovine DNA containing the beta-lactoglobulin gene and 2,020 bp of plasmid vector; p13 (YRO) comprised 13,626 bp of Saccharomyces cerevisiae DNA (chrXIV:243,179-256,806 ((SacCer_Apr2011/sacCer3) assembly)) containing a late-firing replication origin (ARS1413 (~ 250,600-251,220) and 6683 bp of plasmid vector. A mixture of equal weights of linearised plasmids containing BLG and YRO were reconstituted with recombinant Xenopus laevis core histones by salt gradient dialysis. Nucleosomal DNA was prepared from these reconstitutes using micrococcal nuclease. The resulting ~146 bp mononucleosome DNA fragments were purified after electrophoresis.

text: Frog histone reconstitute Mnase


Mycobacterium tuberculosis W4

status: PUBLIC

tag: attribute

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: IP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Mycobacterium tuberculosis W4

characteristic: Submitter Id

text: Mycobacterium tuberculosis

characteristic: organism

text: Mycobacterium tuberculosis

text: Beijing strain family

characteristic: title

type: has member


Mycobacterium tuberculosis R34-990172

text: SRA-Webin

text: IP

text: public

text: Mycobacterium tuberculosis R34-990172

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Beijing strain family


Mycobacterium tuberculosis GC1237

text: SRA-Webin

text: IP

text: public

text: Mycobacterium tuberculosis GC1237

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Beijing strain family


text: SRA-Webin

text: ED

text: public

text: cDNA from Begonia Plebeja (Royal botanic gardens, Edinburgh number: RBGE20051406)

characteristic: description

text: Begonia plebeja

text: Begonia plebeja

text: Begonia Plebeja (CK44/09)


Ven

text: SRA-Webin

text: ED

text: public

text: Ven

text: cDNA from Begonia venustra (Royal botanic gardens, Edinburgh numbers: RBGE20021604 and RBGE20021596)

text: Begonia venusta

text: Begonia venusta

text: Begonia venustra (PH22/10)


text: SRA-Webin

text: ED

text: public

text: cDNA from Begonia conchifolia (Royal botanic gardens, Edinburgh number: RBGE20042082)

text: Begonia conchifolia

text: Begonia conchifolia

text: Begonia conchifolia (CK45/09)


text: SRA-Webin

text: MPI-EVA

text: public

text: sequenced at the run of 101104not used

text: Enterobacteria phage phiX174

text: Enterobacteria phage phiX174


text: SRA-Webin

text: MPI-EVA

text: public

text: sequenced at the run of 100826lane 8_subset2

text: Enterobacteria phage phiX174

text: Enterobacteria phage phiX174


text: SRA-Webin

text: MPI-EVA

text: public

text: sequenced at the run of 101221not used

text: Enterobacteria phage phiX174

text: Enterobacteria phage phiX174


text: SRA-Webin

text: MPI-EVA

text: public

text: sequenced at the run of 100826lane 3_subset2

text: Enterobacteria phage phiX174

text: Enterobacteria phage phiX174


text: SRA-Webin

text: MPI-EVA

text: public

text: sequenced at the run of 100826lane 1_subset2

text: Enterobacteria phage phiX174

text: Enterobacteria phage phiX174


text: SRA-Webin

text: MPI-EVA

text: public

text: sequenced at the run of 100730lane 6_subset1

text: Enterobacteria phage phiX174

text: Enterobacteria phage phiX174


text: SRA-Webin

text: MPI-EVA

text: public

text: sequenced at the run of 10618not used

text: Enterobacteria phage phiX174

text: Enterobacteria phage phiX174


text: SRA-Webin

text: MPI-EVA

text: public

text: sequenced at the run of 100826lane 6_subset2

text: Enterobacteria phage phiX174

text: Enterobacteria phage phiX174


text: SRA-Webin

text: MPI-EVA

text: public

text: sequenced at the run of 100730lane 3_subset1

text: Enterobacteria phage phiX174

text: Enterobacteria phage phiX174


text: SRA-Webin

text: MPI-EVA

text: public

text: sequenced at the run of 100730lane 5_subset1

text: Enterobacteria phage phiX174

text: Enterobacteria phage phiX174


text: SRA-Webin

text: MPI-EVA

text: public

text: sequenced at the run of 100826lane 4_subset2

text: Enterobacteria phage phiX174

text: Enterobacteria phage phiX174


text: SRA-Webin

text: MPI-EVA

text: public

text: sequenced at the run of 100730lane 7_subset1

text: Enterobacteria phage phiX174

text: Enterobacteria phage phiX174


text: SRA-Webin

text: MPI-EVA

text: public

text: sequenced at the run of 100730lane 1_subset1

text: Enterobacteria phage phiX174

text: Enterobacteria phage phiX174


text: SRA-Webin

text: MPI-EVA

text: public

text: sequenced at the run of 100826lane 2_subset2

text: Enterobacteria phage phiX174

text: Enterobacteria phage phiX174


text: SRA-Webin

text: MPI-EVA

text: public

text: sequenced at the run of 100730lane 4_subset1

text: Enterobacteria phage phiX174

text: Enterobacteria phage phiX174


text: SRA-Webin

text: MPI-EVA

text: public

text: sequenced at the run of 100826lane 7_subset2

text: Enterobacteria phage phiX174

text: Enterobacteria phage phiX174


text: SRA-Webin

text: MPI-EVA

text: public

text: sequenced at the run of 100730lane 2_subset1

text: Enterobacteria phage phiX174

text: Enterobacteria phage phiX174


text: SRA-Webin

text: MPI-EVA

text: public

text: sequenced at the run of 100826lane 5_subset2

text: Enterobacteria phage phiX174

text: Enterobacteria phage phiX174


text: SRA-Webin

text: MPI-EVA

text: public

text: sequenced at the run of 101104not used

text: Enterobacteria phage phiX174

text: Enterobacteria phage phiX174


text: SRA-Webin

text: MPI-EVA

text: public

text: sequenced at the run of 100730lane 8_subset1

text: Enterobacteria phage phiX174

text: Enterobacteria phage phiX174


text: SRA-Webin

text: MPI-EVA

text: public

text: sequenced at the run of 101221not used

text: Enterobacteria phage phiX174

text: Enterobacteria phage phiX174


text: Human immunodeficiency virus 1

characteristic: ArrayExpress-Species

text: SC

text: public

text: HIV_1_Strain__3-sc-2012-02-29T16:41:27Z-1372851

text: Human immunodeficiency virus 1

text: Strain: 94UG114

characteristic: sample description

text: Human immunodeficiency virus 1


text: Human immunodeficiency virus 1

text: SC

text: public

text: HIV_1_Plasma__4-sc-2012-02-29T16:41:40Z-1372863

text: Human immunodeficiency virus 1

text: Viral load: 300,000 copies/ml

text: Human immunodeficiency virus 1


text: Human immunodeficiency virus 1

text: SC

text: public

text: HIV_1_Primary_isolate__1-sc-2012-02-29T16:41:34Z-1372858

text: Human immunodeficiency virus 1

text: Human immunodeficiency virus 1


text: Human immunodeficiency virus 1

text: SC

text: public

text: HIV_1_Strain__2-sc-2012-02-29T16:41:26Z-1372850

text: Human immunodeficiency virus 1

text: Strain: 98TZ017

text: Human immunodeficiency virus 1


text: Human immunodeficiency virus 1

text: SC

text: public

text: HIV_1_Strain__4-sc-2012-02-29T16:41:28Z-1372852

text: Human immunodeficiency virus 1

text: Strain: 93BR020

text: Human immunodeficiency virus 1


text: Human immunodeficiency virus 1

text: SC

text: public

text: HIV_1_Strain__1-sc-2012-02-29T16:41:24Z-1372849

text: Human immunodeficiency virus 1

text: Strain: 92UG037

text: Human immunodeficiency virus 1


text: Human immunodeficiency virus 1

text: SC

text: public

text: HIV_1_Strain__6-sc-2012-02-29T16:41:30Z-1372854

text: Human immunodeficiency virus 1

text: Strain: MVP5180

text: Human immunodeficiency virus 1


text: Human immunodeficiency virus 1

text: SC

text: public

text: HIV_1_Plasma__3-sc-2012-02-29T16:41:39Z-1372862

text: Human immunodeficiency virus 1

text: Viral load: 100,000 copies/ml

text: Human immunodeficiency virus 1


text: Human immunodeficiency virus 1

text: SC

text: public

text: HIV_1_Strain__5-sc-2012-02-29T16:41:30Z-1372853

text: Human immunodeficiency virus 1

text: Strain: YBF30

text: Human immunodeficiency virus 1


text: Human immunodeficiency virus 1

text: SC

text: public

text: HIV_1_Strain__8-sc-2012-02-29T16:41:33Z-1372856

text: Human immunodeficiency virus 1

text: Human immunodeficiency virus 1


text: Human immunodeficiency virus 1

text: SC

text: public

text: HIV_1_Strain__7-sc-2012-02-29T16:41:31Z-1372855

text: Human immunodeficiency virus 1

text: Human immunodeficiency virus 1


text: Human immunodeficiency virus 1

text: SC

text: public

text: HIV_1_Strain__9-sc-2012-02-29T16:41:34Z-1372857

text: Human immunodeficiency virus 1

text: Strain: X1870

text: Human immunodeficiency virus 1


text: Human immunodeficiency virus 1

text: SC

text: public

text: HIV_1_Plasma__2-sc-2012-02-29T16:41:38Z-1372861

text: Human immunodeficiency virus 1

text: Viral load: 30,000 copies/ml

text: Human immunodeficiency virus 1


text: Human immunodeficiency virus 1

text: SC

text: public

text: HIV_1_Primary_isolate__2-sc-2012-02-29T16:41:36Z-1372859

text: Human immunodeficiency virus 1

text: Human immunodeficiency virus 1


text: Human immunodeficiency virus 1

text: SC

text: public

text: HIV_1_Plasma__1-sc-2012-02-29T16:41:36Z-1372860

text: Human immunodeficiency virus 1

text: Viral load: 3,000 copies/ml

text: Human immunodeficiency virus 1


text: SRA-Webin

text: MHH

text: public

text: Reads from TBCF10839 genomic DNA, length 36 bases; sequence reads alignend to PAO1 reference sequence

text: CF airways

characteristic: isolate source

text: Hannover Medical School

characteristic: isolated at

text: Pseudomonas aeruginosa TBCF10839

text: Pseudomonas aeruginosa TBCF10839

text: GATC-Biotech AG Konstanz

characteristic: sequencing centre

text: P. aeruginosa

characteristic: species

text: P. aeruginosa TBCF10839, first clone TB isolate sequenced for microevolution analysis


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

text: MHH

text: public

text: Reads from TB63741 genomic DNA, length 36 bases; sequence reads alignend to PAO1 reference sequence

text: wound infection

text: Hannover Medical School

text: Pseudomonas aeruginosa TB63741

text: Pseudomonas aeruginosa TB63741

text: GATC-Biotech AG Konstanz

text: P. aeruginosa

text: P. aeruginosa TB63741, third clone TB isolate sequenced for microevolution analysis


text: SRA-Webin

characteristic: External Id

text: MHH

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Reads from TBCF121838 genomic DNA, length 36 bases; sequence reads alignend to PAO1 reference sequence

text: CF airways

text: Hannover Medical School

text: Pseudomonas aeruginosa TBCF121838

text: Pseudomonas aeruginosa TBCF121838

text: GATC-Biotech AG Konstanz

text: P. aeruginosa

text: P. aeruginosa TBCF121838, second clone TB isolate sequenced for microevolution analysis


text: GSC:MIxS v2.1

characteristic: ENA-CHECKLIST

text: GSC, MIxS, MIENS

characteristic: ENA-KEYWORD

text: Ireland

text: TEAGASC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

unit: day

characteristic: age

unit: mg

characteristic: amount or size of sample collected

text: no antibiotic

characteristic: antibiotic regimen

text: digesta

characteristic: body product

text: caecum

characteristic: body site

characteristic: collection date

unit: m

characteristic: depth

text: sample: caecal digesta from ~150 day old pigs fed isogenic or Bt maize from 5 days post-weaning for 31 days; method of isolation: QIAamp DNA Stool kit

characteristic: elevation

text: host-associated

characteristic: enviornmental package

text: terrestrial biome ENVO:00000446

characteristic: environment (biome)

text: livestock-associated habitat ENVO:02000005

characteristic: environment (featurel)

text: chyme

characteristic: environment (material)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: MIxS

characteristic: investigation type

text: 3 hours before

characteristic: last meal

text: ATCTGCAG

characteristic: multiplex identifiers

text: gut metagenome

text: initial denaturation:94degC_2min; denaturation:94degC_1min, annealing:52degC_1min, elongation:72degC_1 min; final elongation:72degC_2min; total cycles 35

characteristic: pcr conditions

text: F1 (5' - AYTGGGYDTAAAGNG) R1 (5' - TACCRGGGTHTCTAATCC) R2 (5' - TACCAGAGTATCTAATTC) R3 (5' - CTACDSRGGTMTCTAATC) R4 (5' - TACNVGGGTATCTAATCC)

characteristic: pcr primers

text: Neonatal gut microbiota establishment

characteristic: project name

text: gut metagenome

text: Pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: target gene


text: GSC:MIxS v2.1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIENS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Ireland

text: TEAGASC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

characteristic: amount or size of sample collected

text: no antibiotic

characteristic: antibiotic regimen

text: digesta

characteristic: body product

text: caecum

characteristic: body site

characteristic: collection date

characteristic: depth

characteristic: description

text: host-associated

text: terrestrial biome ENVO:00000446

text: chyme

text: MIxS

text: 3 hours before

text: AGAGAGAG

text: gut metagenome

characteristic: organism

text: Neonatal gut microbiota establishment

text: gut metagenome

text: Pyrosequencing

text: male

text: 16S rRNA

characteristic: title


text: GSC:MIxS v2.1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIENS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Ireland

text: TEAGASC

text: public

text: no antibiotic

text: digesta

text: caecum

characteristic: elevation

text: host-associated

characteristic: enviornmental package

text: terrestrial biome ENVO:00000446

characteristic: environment (biome)

characteristic: environment (featurel)

text: chyme

characteristic: environment (material)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: MIxS

characteristic: investigation type

text: 3 hours before

characteristic: last meal

text: AGCATCTG

characteristic: multiplex identifiers

text: gut metagenome

characteristic: pcr conditions

characteristic: pcr primers

text: Neonatal gut microbiota establishment

characteristic: project name

text: gut metagenome

text: Pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: target gene


text: GSC:MIxS v2.1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIENS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Ireland

text: TEAGASC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

characteristic: amount or size of sample collected

text: no antibiotic

characteristic: antibiotic regimen

text: digesta

characteristic: body product

text: caecum

characteristic: body site

characteristic: collection date

characteristic: depth

characteristic: description

text: host-associated

text: terrestrial biome ENVO:00000446

text: chyme

text: MIxS

text: 3 hours before

text: AGCTCAGC

text: gut metagenome

characteristic: organism

text: Neonatal gut microbiota establishment

text: gut metagenome

text: Pyrosequencing

text: male

text: 16S rRNA

characteristic: title


text: GSC:MIxS v2.1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIENS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Ireland

text: TEAGASC

text: public

text: no antibiotic

text: digesta

text: caecum

characteristic: elevation

text: host-associated

characteristic: enviornmental package

text: terrestrial biome ENVO:00000446

characteristic: environment (biome)

characteristic: environment (featurel)

text: chyme

characteristic: environment (material)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: MIxS

characteristic: investigation type

text: 3 hours before

characteristic: last meal

text: AGATCTGC

characteristic: multiplex identifiers

text: gut metagenome

characteristic: pcr conditions

characteristic: pcr primers

text: Neonatal gut microbiota establishment

characteristic: project name

text: gut metagenome

text: Pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: target gene


text: GSC:MIxS v2.1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIENS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Ireland

text: TEAGASC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

characteristic: amount or size of sample collected

text: no antibiotic

characteristic: antibiotic regimen

text: digesta

characteristic: body product

text: caecum

characteristic: body site

characteristic: collection date

characteristic: depth

characteristic: description

text: host-associated

text: terrestrial biome ENVO:00000446

text: chyme

text: MIxS

text: 3 hours before

text: AGCAGAGC

text: gut metagenome

characteristic: organism

text: Neonatal gut microbiota establishment

text: gut metagenome

text: Pyrosequencing

text: male

text: 16S rRNA

characteristic: title


text: GSC:MIxS v2.1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIENS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Ireland

text: TEAGASC

text: public

text: no antibiotic

text: digesta

text: caecum

characteristic: elevation

text: host-associated

characteristic: enviornmental package

text: terrestrial biome ENVO:00000446

characteristic: environment (biome)

characteristic: environment (featurel)

text: chyme

characteristic: environment (material)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: MIxS

characteristic: investigation type

text: 3 hours before

characteristic: last meal

text: ATGATGAG

characteristic: multiplex identifiers

text: gut metagenome

characteristic: pcr conditions

characteristic: pcr primers

text: Neonatal gut microbiota establishment

characteristic: project name

text: gut metagenome

text: Pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: target gene


text: GSC:MIxS v2.1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIENS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Ireland

text: TEAGASC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

characteristic: amount or size of sample collected

text: no antibiotic

characteristic: antibiotic regimen

text: digesta

characteristic: body product

text: caecum

characteristic: body site

characteristic: collection date

characteristic: depth

characteristic: description

text: host-associated

text: terrestrial biome ENVO:00000446

text: chyme

text: MIxS

text: 3 hours before

text: ATGCATGC

text: gut metagenome

characteristic: organism

text: Neonatal gut microbiota establishment

text: gut metagenome

text: Pyrosequencing

text: male

text: 16S rRNA

characteristic: title


text: GSC:MIxS v2.1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIENS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Ireland

text: TEAGASC

text: public

text: no antibiotic

text: digesta

text: caecum

characteristic: elevation

text: host-associated

characteristic: enviornmental package

text: terrestrial biome ENVO:00000446

characteristic: environment (biome)

characteristic: environment (featurel)

text: chyme

characteristic: environment (material)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: MIxS

characteristic: investigation type

text: 3 hours before

characteristic: last meal

text: ATCATCTC

characteristic: multiplex identifiers

text: gut metagenome

characteristic: pcr conditions

characteristic: pcr primers

text: Neonatal gut microbiota establishment

characteristic: project name

text: gut metagenome

text: Pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: target gene


text: GSC:MIxS v2.1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIENS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Ireland

text: TEAGASC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

characteristic: amount or size of sample collected

text: no antibiotic

characteristic: antibiotic regimen

text: digesta

characteristic: body product

text: caecum

characteristic: body site

characteristic: collection date

characteristic: depth

characteristic: description

text: host-associated

text: terrestrial biome ENVO:00000446

text: chyme

text: MIxS

text: 3 hours before

text: ATGAGCTC

text: gut metagenome

characteristic: organism

text: Neonatal gut microbiota establishment

text: gut metagenome

text: Pyrosequencing

text: male

text: 16S rRNA

characteristic: title


text: GSC:MIxS v2.1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIENS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Ireland

text: TEAGASC

text: public

text: no antibiotic

text: digesta

text: caecum

characteristic: elevation

text: host-associated

characteristic: enviornmental package

text: terrestrial biome ENVO:00000446

characteristic: environment (biome)

characteristic: environment (featurel)

text: chyme

characteristic: environment (material)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: MIxS

characteristic: investigation type

text: 3 hours before

characteristic: last meal

text: ATGCTCTC

characteristic: multiplex identifiers

text: gut metagenome

characteristic: pcr conditions

characteristic: pcr primers

text: Neonatal gut microbiota establishment

characteristic: project name

text: gut metagenome

text: Pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: target gene


text: GSC:MIxS v2.1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIENS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Ireland

text: TEAGASC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

characteristic: amount or size of sample collected

text: no antibiotic

characteristic: antibiotic regimen

text: digesta

characteristic: body product

text: caecum

characteristic: body site

characteristic: collection date

characteristic: depth

characteristic: description

text: host-associated

text: terrestrial biome ENVO:00000446

text: chyme

text: MIxS

text: 3 hours before

text: AGCAGCAG

text: gut metagenome

characteristic: organism

text: Neonatal gut microbiota establishment

text: gut metagenome

text: Pyrosequencing

text: male

text: 16S rRNA

characteristic: title


text: GSC:MIxS v2.1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIENS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Ireland

text: TEAGASC

text: public

text: no antibiotic

text: digesta

text: caecum

characteristic: elevation

text: host-associated

characteristic: enviornmental package

text: terrestrial biome ENVO:00000446

characteristic: environment (biome)

characteristic: environment (featurel)

text: chyme

characteristic: environment (material)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: MIxS

characteristic: investigation type

text: 3 hours before

characteristic: last meal

text: AGAGCAGC

characteristic: multiplex identifiers

text: gut metagenome

characteristic: pcr conditions

characteristic: pcr primers

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characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

characteristic: amount or size of sample collected

text: no antibiotic

characteristic: antibiotic regimen

text: digesta

characteristic: body product

text: caecum

characteristic: body site

characteristic: collection date

characteristic: depth

characteristic: description

text: host-associated

text: terrestrial biome ENVO:00000446

text: chyme

text: MIxS

text: 3 hours before

text: ATCATCAG

text: gut metagenome

characteristic: organism

text: Neonatal gut microbiota establishment

text: gut metagenome

text: Pyrosequencing

text: male

text: 16S rRNA

characteristic: title


text: GSC:MIxS v2.1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIENS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Ireland

text: TEAGASC

text: public

text: no antibiotic

text: digesta

text: caecum

characteristic: elevation

text: host-associated

characteristic: enviornmental package

text: terrestrial biome ENVO:00000446

characteristic: environment (biome)

characteristic: environment (featurel)

text: chyme

characteristic: environment (material)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: MIxS

characteristic: investigation type

text: 3 hours before

characteristic: last meal

text: AGCAGCTC

characteristic: multiplex identifiers

text: gut metagenome

characteristic: pcr conditions

characteristic: pcr primers

text: Neonatal gut microbiota establishment

characteristic: project name

text: gut metagenome

text: Pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: target gene


text: GSC:MIxS v2.1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIENS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Ireland

text: TEAGASC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

characteristic: amount or size of sample collected

text: no antibiotic

characteristic: antibiotic regimen

text: digesta

characteristic: body product

text: caecum

characteristic: body site

characteristic: collection date

characteristic: depth

characteristic: description

text: host-associated

text: terrestrial biome ENVO:00000446

text: chyme

text: MIxS

text: 3 hours before

text: AGATGATG

text: gut metagenome

characteristic: organism

text: Neonatal gut microbiota establishment

text: gut metagenome

text: Pyrosequencing

text: male

text: 16S rRNA

characteristic: title


text: GSC:MIxS v2.1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIENS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Ireland

text: TEAGASC

text: public

text: no antibiotic

text: digesta

text: caecum

text: sample: caecal digesta from ~40 day old pigs fed isogenic or Bt maize from 5 days post-weaning for 31 days; method of isolation: QIAamp DNA Stool kit

characteristic: elevation

text: host-associated

characteristic: enviornmental package

text: terrestrial biome ENVO:00000446

characteristic: environment (biome)

characteristic: environment (featurel)

text: chyme ENVO:02000026

characteristic: environment (material)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: pig

characteristic: host common name

characteristic: host taxid

text: MIxS

characteristic: investigation type

text: 3 hours before

characteristic: last meal

text: AGATGATG

characteristic: multiplex identifiers

text: gut metagenome

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text: Neonatal gut microbiota establishment

characteristic: project name

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text: Pyrosequencing

characteristic: sequencing method

text: male

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text: 16S rRNA

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text: GSC:MIxS v2.1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIENS

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characteristic: External Id

text: Ireland

text: TEAGASC

characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

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text: no antibiotic

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text: digesta

characteristic: body product

text: caecum

characteristic: body site

characteristic: collection date

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text: host-associated

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text: terrestrial biome ENVO:00000446

text: chyme ENVO:02000026

text: pig

text: MIxS

text: 3 hours before

text: AGCATCTG

text: gut metagenome

characteristic: organism

text: Neonatal gut microbiota establishment

text: gut metagenome

text: Pyrosequencing

text: male

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characteristic: title


text: GSC:MIxS v2.1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIENS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Ireland

text: TEAGASC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: no antibiotic

text: digesta

text: caecum

text: host-associated

text: terrestrial biome ENVO:00000446

characteristic: environment (biome)

characteristic: environment (featurel)

text: chyme ENVO:02000026

characteristic: environment (material)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: pig

characteristic: host common name

characteristic: host taxid

text: MIxS

characteristic: investigation type

text: 3 hours before

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text: AGCATGAG

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text: gut metagenome

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text: Neonatal gut microbiota establishment

characteristic: project name

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text: Pyrosequencing

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text: male

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text: 16S rRNA

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text: GSC:MIxS v2.1

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text: GSC, MIxS, MIENS

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characteristic: External Id

text: Ireland

text: TEAGASC

characteristic: INSDC center name

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text: public

characteristic: INSDC status

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characteristic: age

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text: no antibiotic

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text: caecum

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text: host-associated

characteristic: enviornmental package

text: terrestrial biome ENVO:00000446

text: chyme ENVO:02000026

text: pig

text: MIxS

text: 3 hours before

text: AGCAGAGC

text: gut metagenome

characteristic: organism

text: Neonatal gut microbiota establishment

text: gut metagenome

text: Pyrosequencing

text: male

text: 16S rRNA

characteristic: title


text: GSC:MIxS v2.1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIENS

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characteristic: External Id

text: Ireland

text: TEAGASC

characteristic: INSDC center name

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text: public

text: no antibiotic

text: digesta

text: caecum

text: host-associated

text: terrestrial biome ENVO:00000446

characteristic: environment (biome)

characteristic: environment (featurel)

text: chyme ENVO:02000026

characteristic: environment (material)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: pig

characteristic: host common name

characteristic: host taxid

text: MIxS

characteristic: investigation type

text: 3 hours before

characteristic: last meal

text: AGAGCAGC

characteristic: multiplex identifiers

text: gut metagenome

text: initial denaturation 94degC_2min; 35 cycles= denaturation94degC_1min, annealing52degC_1min, elongation72degC_1 min; final elongation72degC_2min.

characteristic: pcr conditions

characteristic: pcr primers

text: Neonatal gut microbiota establishment

characteristic: project name

text: gut metagenome

text: Pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: target gene


text: GSC:MIxS v2.1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIENS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Ireland

text: TEAGASC

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

characteristic: INSDC status

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characteristic: Submitter Id

characteristic: age

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text: no antibiotic

characteristic: antibiotic regimen

text: digesta

characteristic: body product

text: caecum

characteristic: body site

characteristic: collection date

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characteristic: description

characteristic: elevation

text: host-associated

characteristic: enviornmental package

text: terrestrial biome ENVO:00000446

text: chyme ENVO:02000026

text: pig

text: MIxS

text: 3 hours before

text: AGAGAGAG

text: gut metagenome

characteristic: organism

text: Neonatal gut microbiota establishment

text: gut metagenome

text: Pyrosequencing

text: male

text: 16S rRNA

characteristic: title


text: GSC:MIxS v2.1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIENS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Ireland

text: TEAGASC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: no antibiotic

text: digesta

text: caecum

text: host-associated

text: terrestrial biome ENVO:00000446

characteristic: environment (biome)

characteristic: environment (featurel)

text: chyme ENVO:02000026

characteristic: environment (material)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: pig

characteristic: host common name

characteristic: host taxid

text: MIxS

characteristic: investigation type

text: 3 hours before

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text: AGAGATGC

characteristic: multiplex identifiers

text: gut metagenome

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text: Neonatal gut microbiota establishment

characteristic: project name

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text: Pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: target gene


text: GSC:MIxS v2.1

characteristic: ENA-CHECKLIST

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text: GSC, MIxS, MIENS

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characteristic: External Id

text: Ireland

text: TEAGASC

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

characteristic: INSDC status

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characteristic: age

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text: no antibiotic

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text: host-associated

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text: terrestrial biome ENVO:00000446

text: chyme ENVO:02000026

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text: 3 hours before

text: ATCATCTC

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characteristic: organism

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text: gut metagenome

text: Pyrosequencing

text: male

text: 16S rRNA

characteristic: title


text: GSC:MIxS v2.1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIENS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Ireland

text: TEAGASC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: no antibiotic

text: digesta

text: caecum

text: host-associated

text: terrestrial biome ENVO:00000446

characteristic: environment (biome)

characteristic: environment (featurel)

text: chyme ENVO:02000026

characteristic: environment (material)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: pig

characteristic: host common name

characteristic: host taxid

text: MIxS

characteristic: investigation type

text: 3 hours before

characteristic: last meal

text: AGCTGATC

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text: gut metagenome

characteristic: pcr conditions

characteristic: pcr primers

text: Neonatal gut microbiota establishment

characteristic: project name

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text: Pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

characteristic: target gene


text: GSC:MIxS v2.1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIENS

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characteristic: External Id

text: Ireland

text: TEAGASC

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

characteristic: INSDC status

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characteristic: age

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text: no antibiotic

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text: caecum

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text: host-associated

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text: terrestrial biome ENVO:00000446

text: chyme ENVO:02000026

text: pig

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text: 3 hours before

text: ATCATCAG

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characteristic: organism

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text: gut metagenome

text: Pyrosequencing

text: male

text: 16S rRNA

characteristic: title


text: GSC:MIxS v2.1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIENS

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Ireland

text: TEAGASC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: no antibiotic

text: digesta

text: caecum

text: host-associated

text: terrestrial biome ENVO:00000446

characteristic: environment (biome)

characteristic: environment (featurel)

text: chyme ENVO:02000026

characteristic: environment (material)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: pig

characteristic: host common name

characteristic: host taxid

text: MIxS

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text: 3 hours before

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text: AGCAGCAG

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text: Neonatal gut microbiota establishment

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text: Pyrosequencing

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text: male

characteristic: sex

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text: GSC:MIxS v2.1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIENS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Ireland

text: TEAGASC

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

characteristic: INSDC status

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characteristic: Submitter Id

characteristic: age

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text: no antibiotic

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text: caecum

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characteristic: collection date

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characteristic: description

characteristic: elevation

text: host-associated

characteristic: enviornmental package

text: terrestrial biome ENVO:00000446

text: chyme ENVO:02000026

text: pig

text: MIxS

text: 3 hours before

text: AGATCATC

text: gut metagenome

characteristic: organism

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text: gut metagenome

text: Pyrosequencing

text: male

text: 16S rRNA

characteristic: title


text: GSC:MIxS v2.1

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characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIENS

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Ireland

text: TEAGASC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: no antibiotic

text: digesta

text: caecum

text: host-associated

text: terrestrial biome ENVO:00000446

characteristic: environment (biome)

characteristic: environment (featurel)

text: chyme ENVO:02000026

characteristic: environment (material)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: pig

characteristic: host common name

characteristic: host taxid

text: MIxS

characteristic: investigation type

text: 3 hours before

characteristic: last meal

text: AGCAGATG

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text: gut metagenome

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text: Neonatal gut microbiota establishment

characteristic: project name

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text: Pyrosequencing

characteristic: sequencing method

text: male

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text: GSC:MIxS v2.1

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characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIENS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Ireland

text: TEAGASC

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

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text: no antibiotic

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text: caecum

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text: host-associated

characteristic: enviornmental package

text: terrestrial biome ENVO:00000446

text: chyme ENVO:02000026

text: pig

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text: 3 hours before

text: ATCAGATC

text: gut metagenome

characteristic: organism

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text: gut metagenome

text: Pyrosequencing

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characteristic: title


text: GSC:MIxS v2.1

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characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIENS

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Ireland

text: TEAGASC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: no antibiotic

text: digesta

text: caecum

text: host-associated

text: terrestrial biome ENVO:00000446

characteristic: environment (biome)

characteristic: environment (featurel)

text: chyme ENVO:02000026

characteristic: environment (material)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: pig

characteristic: host common name

characteristic: host taxid

text: MIxS

characteristic: investigation type

text: 3 hours before

characteristic: last meal

text: ATCAGCTG

characteristic: multiplex identifiers

text: gut metagenome

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text: Neonatal gut microbiota establishment

characteristic: project name

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text: Pyrosequencing

characteristic: sequencing method

text: male

characteristic: sex

text: 16S rRNA

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text: GSC:MIxS v2.1

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text: GSC, MIxS, MIENS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Ireland

text: TEAGASC

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

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text: no antibiotic

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text: caecum

characteristic: body site

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text: host-associated

characteristic: enviornmental package

text: terrestrial biome ENVO:00000446

text: chyme ENVO:02000026

text: pig

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text: AGCTCAGC

text: gut metagenome

characteristic: organism

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text: Pyrosequencing

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text: 16S rRNA

characteristic: title


text: GSC:MIxS v2.1

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characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIENS

characteristic: ENA-KEYWORD

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Ireland

text: TEAGASC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: no antibiotic

text: digesta

text: caecum

text: host-associated

text: terrestrial biome ENVO:00000446

characteristic: environment (biome)

characteristic: environment (featurel)

text: chyme ENVO:02000026

characteristic: environment (material)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: pig

characteristic: host common name

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text: MIxS

characteristic: investigation type

text: 3 hours before

characteristic: last meal

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text: male

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text: GSC:MIxS v2.1

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characteristic: External Id

text: Ireland

text: TEAGASC

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

characteristic: INSDC status

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characteristic: Submitter Id

characteristic: age

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text: no antibiotic

characteristic: antibiotic regimen

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text: caecum

characteristic: body site

characteristic: collection date

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text: host-associated

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text: terrestrial biome ENVO:00000446

text: chyme ENVO:02000026

text: pig

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text: 3 hours before

text: AGAGCATG

text: gut metagenome

characteristic: organism

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text: gut metagenome

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text: male

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characteristic: title


text: GSC:MIxS v2.1

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characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIENS

characteristic: ENA-KEYWORD

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characteristic: External Id

text: Ireland

text: TEAGASC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: no antibiotic

text: digesta

text: caecum

text: host-associated

text: terrestrial biome ENVO:00000446

characteristic: environment (biome)

characteristic: environment (featurel)

text: chyme ENVO:02000026

characteristic: environment (material)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: pig

characteristic: host common name

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text: MIxS

characteristic: investigation type

text: 3 hours before

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characteristic: project name

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characteristic: sequencing method

text: male

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text: GSC:MIxS v2.1

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characteristic: ENA-FIRST-PUBLIC

text: GSC, MIxS, MIENS

characteristic: ENA-KEYWORD

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characteristic: External Id

text: Ireland

text: TEAGASC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

characteristic: amount or size of sample collected

text: no antibiotic

characteristic: antibiotic regimen

text: digesta

characteristic: body product

text: caecum

characteristic: body site

characteristic: collection date

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characteristic: description

characteristic: elevation

text: host-associated

characteristic: enviornmental package

text: terrestrial biome ENVO:00000446

text: chyme ENVO:02000026

text: pig

text: MIxS

text: 3 hours before

text: AGCTGCTG

text: gut metagenome

characteristic: organism

text: Neonatal gut microbiota establishment

text: gut metagenome

text: Pyrosequencing

text: male

text: 16S rRNA

characteristic: title


characteristic: External Id

text: GSC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Hemileia vastatrix

text: Hemileia vastatrix

text: Hemileia vastatrix


text: Saccharomyces cerevisiae

characteristic: ArrayExpress-Species

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: baker's yeast

characteristic: common name

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: Universite de Poitiers

text: public

tag: Namespace:Universite de Poitiers

characteristic: Submitter Id

text: metagenome

text: metagenome


text: Mus Musculus

characteristic: ArrayExpress-SPECIES

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

characteristic: subject id

text: Mus Musculus


text: Plasmodium falciparum

text: SC

text: public

text: malaria parasite P. falciparum

text: Plasmodium falciparum

text: Plasmodium falciparum


text: UNIMIB

text: public

characteristic: collection date

text: glacier

characteristic: environment (biome)

text: alpine glacier

characteristic: environment (feature)

text: cryoconite

characteristic: environment (material)

text: Italy

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: metagenome

text: Temporal dynamics of bacterial communities in cryoconite

characteristic: project name

text: metagenome

text: sediment

characteristic: sediment environmental package

text: Illumina MiSeq

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IATA-CSIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: human

characteristic: common name

text: Gut

characteristic: description

text: Gut

text: Gut

text: gut cells

text: Spain

text: human-gut

characteristic: human gut environmental package

text: human-gut

characteristic: human oral environmental package

text: metagenome

text: Homo sapiens

characteristic: organism

text: Biomarkers

text: stool collection

characteristic: sample collection device or method

text: Homo sapiens

text: sequencing

text: Gut

characteristic: title


text: Biodiversity Institute of Ontario

text: public

text: R_2015_12_11_11_59_18_user_UGP-193-CCDBION171_PCR-NEG1_AquaF2-AquaF3-CFishR1trP1_IonXpress_044

tag: Namespace:Biodiversity Institute of Ontario

characteristic: Submitter Id

text: Negative control

text: aquatic metagenome

text: aquatic metagenome


characteristic: ENA-CHECKLIST

text: Biodiversity Institute of Ontario

text: public

text: R_2015_12_11_11_59_18_user_UGP-193-CCDBION171_PCR-NEG2_AquaF2-AquaF3-CFishR1trP1_IonXpress_049

text: Negative control

text: aquatic metagenome

text: aquatic metagenome


characteristic: ENA-FIRST-PUBLIC

text: Biodiversity Institute of Ontario

text: public

text: R_2015_12_11_11_59_18_user_UGP-193-CCDBION171_PW1_AquaF2-AquaF3-CFishR1trP1_IonXpress_040

text: Martha Valdez-Moreno, Manuel Elias-Gutierrez, Jose Angel Cohuo, Miguel Valadez, Rosaura Castro

characteristic: collected by

characteristic: collection date

text: Water

text: Mexico

characteristic: geographic location (country and/or sea)

text: Quinatana Roo, Bacalar

characteristic: geographic location (region and locality)

text: 18.651469�, -88.408948�

characteristic: lat lon

text: aquatic metagenome

text: aquatic metagenome


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Biodiversity Institute of Ontario

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: R_2015_12_11_11_59_18_user_UGP-193-CCDBION171_PW1b_AquaF2-AquaF3-CFishR1trP1_IonXpress_045

text: Water

text: Mexico

text: Quinatana Roo, Bacalar

text: 18.651469�, -88.408948�

text: aquatic metagenome

text: aquatic metagenome


text: Biodiversity Institute of Ontario

text: public

characteristic: SRA accession

text: R_2015_12_11_11_59_18_user_UGP-193-CCDBION171_PW2_IonXpress_AquaF2-AquaF3-CFishR1trP1_041

text: Water

characteristic: description

text: Mexico

text: Quinatana Roo, Bacalar

text: 18.560084�, -88.446216�

text: aquatic metagenome

characteristic: organism

text: aquatic metagenome


text: Biodiversity Institute of Ontario

text: public

text: R_2015_12_11_11_59_18_user_UGP-193-CCDBION171_PW2b_AquaF2-AquaF3-CFishR1trP1_IonXpress_046

characteristic: Submitter Id

text: Water

text: Mexico

text: Quinatana Roo, Bacalar

text: 18.560084�, -88.446216�

text: aquatic metagenome

text: aquatic metagenome

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Biodiversity Institute of Ontario

text: public

text: R_2015_12_11_11_59_18_user_UGP-193-CCDBION171_PW3_AquaF2-AquaF3-CFishR1trP1_IonXpress_042

text: Water

text: Mexico

text: Quinatana Roo, Bacalar

text: 18.514639�, -88.426750�

text: aquatic metagenome

text: aquatic metagenome


text: Biodiversity Institute of Ontario

text: public

text: R_2015_12_11_11_59_18_user_UGP-193-CCDBION171_PW3b_AquaF2-AquaF3-CFishR1trP1_IonXpress_047

characteristic: collected by

characteristic: collection date

text: Water

text: Mexico

text: Quinatana Roo, Bacalar

text: 18.514639�, -88.426750�

text: aquatic metagenome

text: aquatic metagenome


text: Biodiversity Institute of Ontario

text: public

text: R_2015_12_11_11_59_18_user_UGP-193-CCDBION171_PW-EXT-NEG1_AquaF2-AquaF3-CFishR1trP1_IonXpress_043

text: Negative control

text: aquatic metagenome

text: aquatic metagenome


text: Biodiversity Institute of Ontario

text: public

text: R_2015_12_11_11_59_18_user_UGP-193-CCDBION171_PW-EXT-NEG2_AquaF2-AquaF3-CFishR1trP1_IonXpress_048

text: Negative control

text: aquatic metagenome

text: aquatic metagenome


text: Biodiversity Institute of Ontario

text: public

text: R_2015_12_17_12_05_29_user_UGP-196-CCDBION174_S1_AquaF2-AquaF3-CFishR1trP1_IonXpress_040

text: Sediment

text: Mexico

characteristic: geographic location (country and/or sea)

text: Quinatana Roo, Bacalar

characteristic: geographic location (region and locality)

text: 18.651469�, -88.408948�

text: sediment metagenome

text: sediment metagenome


characteristic: ENA-LAST-UPDATE

text: Biodiversity Institute of Ontario

text: public

text: R_2015_12_17_12_05_29_user_UGP-196-CCDBION174_S1b_AquaF2-AquaF3-CFishR1trP1_IonXpress_045

text: Sediment

text: Mexico

text: Quinatana Roo, Bacalar

text: 18.651469�, -88.408948�

characteristic: lat lon

text: sediment metagenome

text: sediment metagenome


characteristic: External Id

text: Biodiversity Institute of Ontario

characteristic: INSDC center name

text: public

text: R_2015_12_17_12_05_29_user_UGP-196-CCDBION174_S2_AquaF2-AquaF3-CFishR1trP1_IonXpress_041

text: Sediment

text: Mexico

text: Quinatana Roo, Bacalar

text: 18.560084�, -88.446216�

text: sediment metagenome

text: sediment metagenome


text: Biodiversity Institute of Ontario

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: R_2015_12_17_12_05_29_user_UGP-196-CCDBION174_S2b_AquaF2-AquaF3-CFishR1trP1_IonXpress_046

text: Sediment

text: Mexico

text: Quinatana Roo, Bacalar

text: 18.560084�, -88.446216�

text: sediment metagenome

text: sediment metagenome


text: Biodiversity Institute of Ontario

text: public

characteristic: INSDC status

characteristic: SRA accession

text: R_2015_12_17_12_05_29_user_UGP-196-CCDBION174_S3_AquaF2-AquaF3-CFishR1trP1_IonXpress_042

text: Sediment

text: Mexico

text: Quinatana Roo, Bacalar

text: 18.514639�, -88.426750�

text: sediment metagenome

text: sediment metagenome


text: Biodiversity Institute of Ontario

text: public

text: R_2015_12_17_12_05_29_user_UGP-196-CCDBION174_S3b_AquaF2-AquaF3-CFishR1trP1_IonXpress_047

text: Sediment

characteristic: description

text: Mexico

text: Quinatana Roo, Bacalar

text: 18.514639�, -88.426750�

text: sediment metagenome

characteristic: organism

text: sediment metagenome


text: Biodiversity Institute of Ontario

text: public

text: R_2015_12_17_12_05_29_user_UGP-196-CCDBION174_S-EXTR-NEG1_AquaF2-AquaF3-CFishR1trP1_IonXpress_043

characteristic: Submitter Id

text: Negative control

text: sediment metagenome

text: sediment metagenome

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Biodiversity Institute of Ontario

text: public

text: R_2015_12_17_12_05_29_user_UGP-196-CCDBION174_S-EXTR-NEG2_AquaF2-AquaF3-CFishR1trP1_IonXpress_048

text: Negative control

text: sediment metagenome

text: sediment metagenome


text: Biodiversity Institute of Ontario

text: public

text: R_2015_12_17_12_05_29_user_UGP-196-CCDBION174_S-PCR-NEG1_AquaF2-AquaF3-CFishR1trP1_IonXpress_044

text: Negative control

text: sediment metagenome

text: sediment metagenome


text: Biodiversity Institute of Ontario

text: public

text: R_2015_12_17_12_05_29_user_UGP-196-CCDBION174_S-PCR-NEG2_AquaF2-AquaF3-CFishR1trP1_IonXpress_049

text: Negative control

text: sediment metagenome

text: sediment metagenome


text: Biodiversity Institute of Ontario

text: public

text: R_2016_02_09_12_35_31_user_UGP-202-CCDBION180_PW1_AquaF2-AquaF3-CFishR1trP1_IonXpress_040

text: Martha Valdez-Moreno, Manuel Elias-Gutierrez, Jose Angel Cohuo, Miguel Valadez, Rosaura Castro

characteristic: collected by

characteristic: collection date

text: Water

text: Mexico

text: Quinatana Roo, Bacalar

text: 17.903109�, -88.858036�

text: aquatic metagenome

text: aquatic metagenome


text: Biodiversity Institute of Ontario

text: public

text: R_2016_02_09_12_35_31_user_UGP-202-CCDBION180_PW1b_AquaF2-AquaF3-CFishR1trP1_IonXpress_045

text: Water

text: Mexico

characteristic: geographic location (country and/or sea)

text: Quinatana Roo, Bacalar

characteristic: geographic location (region and locality)

text: 17.903109�, -88.858036�

text: aquatic metagenome

text: aquatic metagenome


characteristic: ENA-LAST-UPDATE

text: Biodiversity Institute of Ontario

text: public

text: R_2016_02_09_12_35_31_user_UGP-202-CCDBION180_PW2_AquaF2-AquaF3-CFishR1trP1_IonXpress_041

text: Water

text: Mexico

text: Quinatana Roo, Bacalar

text: 18.299259�, -88.597250�

characteristic: lat lon

text: aquatic metagenome

text: aquatic metagenome


characteristic: External Id

text: Biodiversity Institute of Ontario

characteristic: INSDC center name

text: public

text: R_2016_02_09_12_35_31_user_UGP-202-CCDBION180_PW2b_AquaF2-AquaF3-CFishR1trP1_IonXpress_046

text: Water

text: Mexico

text: Quinatana Roo, Bacalar

text: 18.299259�, -88.597250�

text: aquatic metagenome

text: aquatic metagenome


text: Biodiversity Institute of Ontario

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: R_2016_02_09_12_35_31_user_UGP-202-CCDBION180_PW3_AquaF2-AquaF3-CFishR1trP1_IonXpress_042

text: Water

text: Mexico

text: Quinatana Roo, Bacalar

text: 18.528561�, -88.429242�

text: aquatic metagenome

text: aquatic metagenome


text: Biodiversity Institute of Ontario

text: public

characteristic: INSDC status

characteristic: SRA accession

text: R_2016_02_09_12_35_31_user_UGP-202-CCDBION180_PW3b_AquaF2-AquaF3-CFishR1trP1_IonXpress_047

text: Water

text: Mexico

text: Quinatana Roo, Bacalar

text: 18.528561�, -88.429242�

text: aquatic metagenome

text: aquatic metagenome


text: Biodiversity Institute of Ontario

text: public

text: R_2016_02_09_12_35_31_user_UGP-202-CCDBION180_PW4_AquaF2-AquaF3-CFishR1trP1_IonXpress_043

text: Water

characteristic: description

text: Mexico

text: Quinatana Roo, Bacalar

text: 18.920052�, -88.170100�

text: aquatic metagenome

characteristic: organism

text: aquatic metagenome


text: Biodiversity Institute of Ontario

text: public

text: R_2016_02_09_12_35_31_user_UGP-202-CCDBION180_PW4b_AquaF2-AquaF3-CFishR1trP1_IonXpress_048

characteristic: Submitter Id

text: Water

text: Mexico

text: Quinatana Roo, Bacalar

text: 18.920052�, -88.170100�

text: aquatic metagenome

text: aquatic metagenome

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Biodiversity Institute of Ontario

text: public

text: R_2016_02_09_12_35_31_user_UGP-202-CCDBION180_PW-EXTR-NEG_AquaF2-AquaF3-CFishR1trP1_IonXpress_044

text: Negative control

text: aquatic metagenome

text: aquatic metagenome


text: Biodiversity Institute of Ontario

text: public

text: R_2016_02_09_12_35_31_user_UGP-202-CCDBION180_PW-PCR-NEG_AquaF2-AquaF3-CFishR1trP1_IonXpress_049

text: Negative control

text: aquatic metagenome

text: aquatic metagenome


text: Biodiversity Institute of Ontario

text: public

text: R_2018_02_15_11_11_42_user_UGP-305-CCDB-PGM-0277-181rerun_S1_AquaF2-AquaF3-CFishR1trP1_IonXpress_040

characteristic: collected by

characteristic: collection date

text: Sediment

text: Mexico

text: Quinatana Roo, Bacalar

text: 17.903109�, -88.858036�

text: sediment metagenome

text: sediment metagenome


text: Biodiversity Institute of Ontario

text: public

text: R_2018_02_15_11_11_42_user_UGP-305-CCDB-PGM-0277-181rerun_S1b_AquaF2-AquaF3-CFishR1trP1_IonXpress_045

text: Sediment

text: Mexico

characteristic: geographic location (country and/or sea)

text: Quinatana Roo, Bacalar

characteristic: geographic location (region and locality)

text: 17.903109�, -88.858036�

text: sediment metagenome

text: sediment metagenome


characteristic: ENA-LAST-UPDATE

text: Biodiversity Institute of Ontario

text: public

text: R_2018_02_15_11_11_42_user_UGP-305-CCDB-PGM-0277-181rerun_S2_AquaF2-AquaF3-CFishR1trP1_IonXpress_041

text: Sediment

text: Mexico

text: Quinatana Roo, Bacalar

text: 18.299259�, -88.597250�

characteristic: lat lon

text: sediment metagenome

text: sediment metagenome


characteristic: External Id

text: Biodiversity Institute of Ontario

characteristic: INSDC center name

text: public

text: R_2018_02_15_11_11_42_user_UGP-305-CCDB-PGM-0277-181rerun_S2b_AquaF2-AquaF3-CFishR1trP1_IonXpress_046

text: Sediment

text: Mexico

text: Quinatana Roo, Bacalar

text: 18.299259�, -88.597250�

text: sediment metagenome

text: sediment metagenome


text: Biodiversity Institute of Ontario

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: R_2018_02_15_11_11_42_user_UGP-305-CCDB-PGM-0277-181rerun_S3_AquaF2-AquaF3-CFishR1trP1_IonXpress_042

text: Sediment

text: Mexico

text: Quinatana Roo, Bacalar

text: 18.299259�, -88.597250�

text: sediment metagenome

text: sediment metagenome


text: Biodiversity Institute of Ontario

text: public

characteristic: INSDC status

characteristic: SRA accession

text: R_2018_02_15_11_11_42_user_UGP-305-CCDB-PGM-0277-181rerun_S3b_AquaF2-AquaF3-CFishR1trP1_IonXpress_047

text: Sediment

text: Mexico

text: Quinatana Roo, Bacalar

text: 18.299259�, -88.597250�

text: sediment metagenome

text: sediment metagenome


text: Biodiversity Institute of Ontario

text: public

text: R_2018_02_15_11_11_42_user_UGP-305-CCDB-PGM-0277-181rerun_S4_AquaF2-AquaF3-CFishR1trP1_IonXpress_043

text: Sediment

characteristic: description

text: Mexico

text: Quinatana Roo, Bacalar

text: 18.920052�, -88.170100�

text: sediment metagenome

characteristic: organism

text: sediment metagenome


text: Biodiversity Institute of Ontario

text: public

text: R_2018_02_15_11_11_42_user_UGP-305-CCDB-PGM-0277-181rerun_S4b_AquaF2-AquaF3-CFishR1trP1_IonXpress_048

characteristic: Submitter Id

text: Martha Valdez-Moreno, Manuel Elias-Gutierrez, Jose Angel Cohuo, Miguel Valadez, Rosaura Castro

text: Sediment

text: Mexico

text: Quinatana Roo, Bacalar

text: 18.920052�, -88.170100�

text: sediment metagenome

text: sediment metagenome

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Biodiversity Institute of Ontario

text: public

text: R_2018_02_15_11_11_42_user_UGP-305-CCDB-PGM-0277-181rerun_S-NEG-EXTR_AquaF2-AquaF3-CFishR1trP1_IonXpress_044

text: Negative control

text: sediment metagenome

text: sediment metagenome


text: Biodiversity Institute of Ontario

text: public

text: R_2018_02_15_11_11_42_user_UGP-305-CCDB-PGM-0277-181rerun_S-NEG-PCR_AquaF2-AquaF3-CFishR1trP1_IonXpress_049

text: Negative control

text: sediment metagenome

text: sediment metagenome


text: Biodiversity Institute of Ontario

text: public

text: R_2015_04_20_21_40_13_user_UGP-209-CCDBION187_P-pardialis_AquaF2-AquaF3-CFishR1trP1_IonXpress_055

text: Positive control

text: aquatic metagenome

text: aquatic metagenome


text: Biodiversity Institute of Ontario

text: public

text: R_2015_04_20_21_40_13_user_UGP-209-CCDBION187_PW1_AquaF2-AquaF3-CFishR1trP1_IonXpress_040

characteristic: collected by

characteristic: collection date

text: Water

text: Mexico

text: Quinatana Roo, Bacalar

text: 18.920052�, -88.170100�

text: aquatic metagenome

text: aquatic metagenome


text: Biodiversity Institute of Ontario

text: public

text: R_2015_04_20_21_40_13_user_UGP-209-CCDBION187_PW1b_AquaF2-AquaF3-CFishR1trP1_IonXpress_047

text: Water

text: Mexico

characteristic: geographic location (country and/or sea)

text: Quinatana Roo, Bacalar

characteristic: geographic location (region and locality)

text: 18.920052�, -88.170100�

text: aquatic metagenome

text: aquatic metagenome


characteristic: ENA-LAST-UPDATE

text: Biodiversity Institute of Ontario

text: public

text: R_2015_04_20_21_40_13_user_UGP-209-CCDBION187_PW2_AquaF2-AquaF3-CFishR1trP1_IonXpress_041

text: Water

text: Mexico

text: Quinatana Roo, Bacalar

text: 18.560084�, -88.446216�

characteristic: lat lon

text: aquatic metagenome

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characteristic: External Id

text: Biodiversity Institute of Ontario

characteristic: INSDC center name

text: public

text: R_2015_04_20_21_40_13_user_UGP-209-CCDBION187_PW2b_AquaF2-AquaF3-CFishR1trP1_IonXpress_048

text: Water

text: Mexico

text: Quinatana Roo, Bacalar

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text: aquatic metagenome

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text: Biodiversity Institute of Ontario

characteristic: INSDC first public

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text: public

text: R_2015_04_20_21_40_13_user_UGP-209-CCDBION187_PW3_AquaF2-AquaF3-CFishR1trP1_IonXpress_042

text: Water

text: Mexico

text: Quinatana Roo, Bacalar

text: 18.516144�, -88.436876�

text: aquatic metagenome

text: aquatic metagenome


text: Biodiversity Institute of Ontario

text: public

characteristic: INSDC status

characteristic: SRA accession

text: R_2015_04_20_21_40_13_user_UGP-209-CCDBION187_PW3b_AquaF2-AquaF3-CFishR1trP1_IonXpress_049

text: Water

text: Mexico

text: Quinatana Roo, Bacalar

text: 18.516144�, -88.436876�

text: aquatic metagenome

text: aquatic metagenome


text: Biodiversity Institute of Ontario

text: public

text: R_2015_04_20_21_40_13_user_UGP-209-CCDBION187_PW4_AquaF2-AquaF3-CFishR1trP1_IonXpress_043

text: Water

characteristic: description

text: Mexico

text: Quinatana Roo, Bacalar

text: 18.651469�, -88.408948�

text: aquatic metagenome

characteristic: organism

text: aquatic metagenome


text: Biodiversity Institute of Ontario

text: public

text: R_2015_04_20_21_40_13_user_UGP-209-CCDBION187_PW4b_AquaF2-AquaF3-CFishR1trP1_IonXpress_050

characteristic: Submitter Id

text: Water

text: Mexico

text: Quinatana Roo, Bacalar

text: 18.651469�, -88.408948�

text: aquatic metagenome

text: aquatic metagenome

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Biodiversity Institute of Ontario

text: public

text: R_2015_04_20_21_40_13_user_UGP-209-CCDBION187_PW5_AquaF2-AquaF3-CFishR1trP1_IonXpress_044

text: Water

text: Mexico

text: Quinatana Roo, Bacalar

text: 17.894676�, -88.870059�

text: aquatic metagenome

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text: Biodiversity Institute of Ontario

text: public

text: R_2015_04_20_21_40_13_user_UGP-209-CCDBION187_PW5b_AquaF2-AquaF3-CFishR1trP1_IonXpress_051

characteristic: collected by

characteristic: collection date

text: Water

text: Mexico

text: Quinatana Roo, Bacalar

text: 17.894676�, -88.870059�

text: aquatic metagenome

text: aquatic metagenome