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text: Coastal Sea Water (ENVO:00002150)

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characteristic: title


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characteristic: description

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characteristic: environment (biome)

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characteristic: environment (feature)

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characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

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text: marine metagenome

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text: 16S rRNA

characteristic: target gene

text: V4-V5 region

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characteristic: environment (biome)

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characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Brest

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characteristic: investigation type

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characteristic: organism

text: marine metagenome

text: Illumina MiSeq

text: 16S rRNA

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characteristic: title


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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Bacterial community from the seawater collected the 2015-03-26

text: Marine Biome (ENVO:00000447)

text: Coastal Sea Water (ENVO:00002150)

text: Sea Water (ENVO:00002149)

text: France

text: Brest

text: metagenome

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characteristic: pcr primers

characteristic: project name

text: marine metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: 16S rRNA

text: V4-V5 region

text: Seawater bacterial community 2015-03-26 , replicate 1


characteristic: External Id

text: IUEM

text: public

characteristic: description

text: Marine Biome (ENVO:00000447)

characteristic: environment (biome)

text: Coastal Sea Water (ENVO:00002150)

characteristic: environment (feature)

text: Sea Water (ENVO:00002149)

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Brest

characteristic: geographic location (region and locality)

text: metagenome

characteristic: investigation type

text: miscellaneous natural or artificial environment

text: marine metagenome

text: marine metagenome

text: Illumina MiSeq

text: 16S rRNA

characteristic: target gene

text: V4-V5 region

characteristic: target subfragment

characteristic: temperature

text: Seawater bacterial community 2015-03-26 , replicate 2


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text: IUEM

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characteristic: INSDC first public

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text: public

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characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Marine Biome (ENVO:00000447)

text: Coastal Sea Water (ENVO:00002150)

text: Sea Water (ENVO:00002149)

text: France

text: Brest

text: metagenome

characteristic: miscellaneous environmental package

text: marine metagenome

characteristic: organism

text: Forward Primer (518F) CCAGCAGCYGCGGTAAN and Reverse Primers (926R) CCGTCAATTCNTTTRAGT CCGTCAATTTCTTTGAGT CCGTCTATTCCTTTGANT

text: marine metagenome

text: Illumina MiSeq

text: 16S rRNA

text: V4-V5 region

text: Seawater bacterial community 2015-03-26 , replicate 3

characteristic: title


characteristic: External Id

text: unmutated

characteristic: IGHV mutational status

text: public

tag: Namespace:Institute of Applied Biosciences / Centre for Research and Technology Hellas

text: ArrayExpress

characteristic: broker name

text: CD19+ negatively selected B cell

characteristic: cell type

text: human

characteristic: common name

text: Protocols: PBMCs from CLL patients peripheral blood were isolated using density gradient separation (tumor load of all preparations was checked by flow cytometry and always exceeded 70% for CD19+ cells). Negative selection of CD19+ B cells from CLL patients peripheral blood was performed using the RosetteSep B-cell enrichment kit (StemCell Technologies, Vancouver, BC, Canada) following the manufacturer’s instructions. The purity of all preparations was checked by flow cytometry and always exceeded 95% for CD19+ cells. Total RNA was extracted using the QIAamp RNA Blood Mini Kit (QIAGEN, Hilden, Germany) according to the manufacturer’s protocol. RNA concentration was estimated usingthe Qubit Fluorometer (Invitrogen, La Jolla, CA). 1μg of total RNA was used for the library construction using the NEB Next Ultra RNA library Prep Kit (New England Biolabs, Ipswich, MA) or the TruSeq RNA Library Prep Kit v2 (Illumina, San Diego, CA). Library quantification was performed with the KAPA SYBR FAST Universal qPCR kit (KAPA Biosystems, Boston, USA).

characteristic: description

text: chronic lymphocytic leukemia

characteristic: disease

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

characteristic: stereotyped subset

text: blood

characteristic: tissue


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text: unmutated

text: Institute of Applied Biosciences / Centre for Research and Technology Hellas

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

text: ArrayExpress

text: CD19+ negatively selected B cell

text: human

text: chronic lymphocytic leukemia

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: blood


text: unmutated

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: monocyte

text: human

text: chronic lymphocytic leukemia

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Homo sapiens

text: blood


text: Leishmania braziliensis

characteristic: ArrayExpress-SPECIES

characteristic: External Id

text: SC

text: public

text: Leishmania braziliensis

text: Leishmania braziliensis

text: Leishmania braziliensis

characteristic: subject id

characteristic: title


text: Leishmania braziliensis x Leishmania peruviana

text: SC

text: public

characteristic: common name


text: Leishmania peruviana

text: SC

text: public

text: Leishmania peruviana

text: Leishmania peruviana

text: Leishmania peruviana


text: Leishmania braziliensis

text: SC

text: public

text: Leishmania braziliensis

text: Leishmania braziliensis

text: Leishmania braziliensis


text: Leishmania braziliensis

text: SC

text: public

text: Leishmania braziliensis

text: Leishmania braziliensis

text: Leishmania braziliensis

text: MHOM/BR/2002/NMT-LTCP 14417-P


text: Leishmania braziliensis

text: SC

text: public

text: Leishmania braziliensis

text: Leishmania braziliensis

text: Leishmania braziliensis

text: MHOM/BR/2002/NMT-LTCP 14447-P


text: Leishmania braziliensis

text: SC

text: public

text: Leishmania braziliensis

text: Leishmania braziliensis

text: Leishmania braziliensis

text: MHOM/BR/2002/NMT-LTCP 14616-P


text: Leishmania braziliensis

text: SC

text: public

text: Leishmania braziliensis

text: Leishmania braziliensis

text: Leishmania braziliensis

text: MHOM/BR/2002/NMT-LTCP 14621-P


text: Leishmania braziliensis

text: SC

text: public

text: Leishmania braziliensis

text: Leishmania braziliensis

text: Leishmania braziliensis

text: MHOM/BR/2002/NMT-LTCP 14627-P


Escherichia coli BCC2

text: University of Nottingham

text: public

text: Escherichia coli BCC2

tag: Namespace:University of Nottingham

text: SequenceAnalysis.co.uk

characteristic: broker name

text: DNA sample prepared for WGS run

characteristic: description

text: kit

text: Escherichia coli

text: Escherichia coli

text: Whole genome sequencing sample E.coli BCC2


Escherichia coli BCE3

characteristic: ENA-CHECKLIST

text: University of Nottingham

text: public

text: Escherichia coli BCE3

text: SequenceAnalysis.co.uk

text: DNA sample prepared for WGS run

text: kit

text: Escherichia coli

text: Escherichia coli

text: Whole genome sequencing sample E.coli BCE3


Escherichia coli BS7

characteristic: ENA-FIRST-PUBLIC

text: University of Nottingham

text: public

text: Escherichia coli BS7

text: SequenceAnalysis.co.uk

text: DNA sample prepared for WGS run

text: kit

text: Escherichia coli

text: Escherichia coli

text: Whole genome sequencing sample E.coli BS7


Escherichia coli A2.5

characteristic: ENA-LAST-UPDATE

text: University of Nottingham

text: public

text: Escherichia coli A2.5

text: SequenceAnalysis.co.uk

text: DNA sample prepared for WGS run

text: kit

text: Escherichia coli

text: Escherichia coli

text: Whole genome sequencing sample E.coli A2.5


text: UNIVERSITY OF CALGARY

characteristic: INSDC center name

text: public

tag: Namespace:UNIVERSITY OF CALGARY

text: UNESP

characteristic: collecting institution

characteristic: collection date

text: Cesar C. Bassetto

characteristic: collector name

characteristic: dev stage

text: Brazil

characteristic: geographic location (country and/or sea)

text: Cattle

characteristic: host common name

characteristic: isolate

text: Haemonchus similis

text: Haemonchus similis


characteristic: External Id

text: UNIVERSITY OF CALGARY

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: UNESP

text: Murilo A. Bichuette

text: Brazil

text: Cattle

text: Cooperia pectinata

characteristic: organism

text: Cooperia pectinata


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF CALGARY

text: public

text: Merial

text: Jeffrey Shryock

text: USA

text: Cattle

text: Cooperia oncophora

text: Cooperia oncophora

characteristic: title


characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF CALGARY

characteristic: INSDC center name

text: public

text: Merial

characteristic: collecting institution

text: Jeffrey Shryock

text: USA

text: Cattle

text: Cooperia punctata

text: Cooperia punctata


Cc-bulk

text: UNIVERSITY OF CALGARY

text: public

text: Cc-bulk

text: Moredun Research Institute

characteristic: collection date

text: Dave Bartley

characteristic: collector name

characteristic: dev stage

text: United Kingdom

text: Sheep

text: Cc-bulk

text: Cooperia curticei

text: Cooperia curticei

text: Cc-bulk


text: UNIVERSITY OF CALGARY

text: public

text: Merial

text: Jeffrey Shryock

text: barber pole worm

characteristic: common name

text: USA

characteristic: geographic location (country and/or sea)

text: Sheep

characteristic: host common name

characteristic: isolate

text: Haemonchus contortus

text: Haemonchus contortus


characteristic: External Id

text: UNIVERSITY OF CALGARY

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Merial

text: Jeffrey Shryock

text: USA

text: Cattle

text: Haemonchus placei

text: Haemonchus placei


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF CALGARY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Moredun Research Institute

text: Dave Bartley

text: United Kingdom

text: Sheep

text: Teladorsagia circumcincta

characteristic: organism

text: Teladorsagia circumcincta


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF CALGARY

characteristic: INSDC center name

text: public

text: Merial

text: Jeffrey Shryock

text: USA

text: Cattle

text: Ostertagia ostertagi

text: Ostertagia ostertagi

characteristic: title


text: UNIVERSITY OF CALGARY

text: public

text: Merial

characteristic: collecting institution

characteristic: collection date

text: Jeffrey Shryock

characteristic: collector name

characteristic: dev stage

text: USA

text: Cattle

text: Trichostrongylus axei

text: Trichostrongylus axei


text: UNIVERSITY OF CALGARY

text: public

text: Merial

text: Jeffrey Shryock

text: USA

characteristic: geographic location (country and/or sea)

text: Cattle

characteristic: host common name

characteristic: isolate

text: Trichostrongylus colubriformis

text: Trichostrongylus colubriformis


Tvit-bulk

characteristic: External Id

text: UNIVERSITY OF CALGARY

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Tvit-bulk

text: Moredun Research Institute

text: Dave Bartley

text: United Kingdom

text: Sheep

text: Tvit-bulk

text: Trichostrongylus vitrinus

text: Trichostrongylus vitrinus

text: Tvit-bulk


characteristic: ENA-CHECKLIST

text: AALBORG UNIVERSITY

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:AALBORG UNIVERSITY

characteristic: day

text: Biofilter microbiome

characteristic: description

characteristic: module

text: metagenome

text: Bacteria

characteristic: sample type

text: metagenome

text: Ozone

characteristic: treatment


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: AALBORG UNIVERSITY

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: Biofilter microbiome

text: metagenome

characteristic: organism

text: Bacteria

text: metagenome

characteristic: title

text: Control


characteristic: External Id

text: AALBORG UNIVERSITY

text: public

text: Biofilter microbiome

text: Inoculum

text: metagenome

text: Bacteria

text: metagenome

text: Inoculum


text: AALBORG UNIVERSITY

characteristic: INSDC first public

text: public

text: Biofilter microbiome

text: metagenome

text: Fungi

text: metagenome

text: Ozone


text: AALBORG UNIVERSITY

characteristic: INSDC last update

text: public

text: Biofilter microbiome

text: metagenome

text: Fungi

text: metagenome

text: Control


text: Cell line

characteristic: ArrayExpress-PHENOTYPE

text: Homo sapiens

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

text: SC

text: public

text: human

characteristic: common name

text: Homo sapiens

text: Cell line

characteristic: phenotype

text: Homo sapiens

characteristic: subject id


text: Brachyptera putata

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Brachyptera putata

text: Brachyptera putata

text: Brachyptera putata


characteristic: ENA-FIRST-PUBLIC

text: Postdoc

text: public

text: ArrayExpress

characteristic: broker name

text: baker's yeast

text: Protocols: Cells were collected by rapid vacuum filtration and subsequent flash-freezing in liquid nitrogen. Frozen cell pellets were lysed using cryogenic milling. Cultured at 20 degrees Celsius in 750 ml of synthetic complete medium up to OD600 of 0.6. TRI Reagent (AM9738, ThermoFisher) was used to extract the RNA, followed by clean-up using RNA Clean & Concentrator -25 Kit (Zymo Research). RNA-Seq libraries were constructed using ScriptSeq Complete Gold Yeast Kit (Epicentre). Ribo-Seq libraries were prepared essentially as per Ingolia and colleagues, NatMeth 2012 (PMID: 22836135) with modifications on rRNA removal (Ribo-Zero Gold rRNA Removal Kit -Yeast) and sample purification procedures between enzymatic steps (RNA Clean & Concentrator -5 Kit).

characteristic: description

text: ribosome protected fragments 18-42nt

characteristic: fraction

text: deletion

characteristic: genetic modification

text: NEW1 knockout

characteristic: genotype

text: 20 degree celsius; synthetic complete medium

characteristic: growth condition

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: BY derivative

characteristic: strain


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Postdoc

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: ArrayExpress

text: baker's yeast

text: ribosome protected fragments 18-42nt

text: wild type genotype

text: Saccharomyces cerevisiae

characteristic: organism

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: BY derivative

characteristic: title


characteristic: ENA-CHECKLIST

text: Postdoc

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ArrayExpress

text: baker's yeast

characteristic: common name

text: rRNA depleted total RNA

text: deletion

text: NEW1 knockout

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: BY derivative


characteristic: ENA-FIRST-PUBLIC

text: Postdoc

text: public

text: ArrayExpress

characteristic: broker name

text: baker's yeast

characteristic: description

text: rRNA depleted total RNA

characteristic: fraction

text: wild type genotype

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: BY derivative


text: Copadichromis borleyi

characteristic: ArrayExpress-SPECIES

text: SC

text: public

text: Copadichromis borleyi

text: Copadichromis borleyi

text: Copadichromis borleyi

characteristic: subject id


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

tag: Namespace:Centre for research and Technology Hellas - Institute of Applied Biosciences

characteristic: collection date

text: Biological treatment of Table Olive Processing Wastewater (TOPW) may be problematic due to its high organic and polyphenolic compounds content. Biomass acclimatization is a necessary, yet sensitive, stage for efficient TOPW biological treatment; Next-Generation Sequencing technologies can provide valuable insights for this critical process step. An aerobic Membrane Bioreactor (MBR) system, initially inoculated with municipal activated sludge, was acclimatized to treat TOPW. 16S and 18S metabarcoding and metatrascriptomics was used to assess the dynamic of the microbial community in approx 3 month period

text: meditteranan ecosystem

characteristic: environment (biome)

text: harbor

characteristic: environment (feature)

text: sewage

characteristic: environment (material)

text: Greece

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: bacterium

text: Analysis of the microbial community of a membrane bioreactor treating table olive processing wastewater

characteristic: project name

text: bacterium

text: Illumina

characteristic: sequencing method

text: Analysis of the microbial community dynamics during acclimatization of a membrane bioreactor treating table olive processing wastewater

text: wastewater/sludge

characteristic: wastewater/sludge environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Centre for research and Technology Hellas - Institute of Applied Biosciences

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: description

text: meditteranan ecosystem

text: harbor

text: sewage

text: Greece

text: metagenome

text: bacterium

characteristic: organism

text: bacterium

text: Illumina

characteristic: title

text: wastewater/sludge


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

tag: Namespace:VIB Center for Cancer Biology (CCB)  Laboratory for Translational Genetics  Department of Human Genetics

text: ArrayExpress

characteristic: broker name

text: human

characteristic: common name

text: Protocols: Study participants and phenotypes Between March 2010 and August 2011, we prospectively recruited newly diagnosed and previously untreated lung cancer patients that were referred for thoracic surgery with curative intent. Subjects were only eligible for inclusion if surgical resection of the tumor occurred prior to any form of medical treatment. Tissue was collected immediately after lobectomy/pneumonectomy. Total RNA was extracted from six 30-μm sections of frozen whole tumor and adjacent lung tissue using the Qiagen-RNeasy Mini kit according to the supplier’s instructions (Qiagen, Hilden, Germany). The quantity of DNA-free total RNA was measured using a Nanodrop-2000. Illumina sequencing libraries were prepared according to the TruSeq RNA Sample Preparation Guide following the manufacturer’s instructions.

text: adult

characteristic: developmental stage

text: non-small cell lung carcinoma

characteristic: disease

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: lung

characteristic: organism part

text: normal tissue adjacent to neoplasm

characteristic: sampling site

text: Homo sapiens

text: male

characteristic: sex


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: VIB Center for Cancer Biology (CCB) Laboratory for Translational Genetics Department of Human Genetics

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ArrayExpress

text: human

text: adult

text: non-small cell lung carcinoma

text: Homo sapiens

text: Homo sapiens

text: lung

text: neoplasm

text: Homo sapiens

text: male


text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: human

characteristic: description

text: adult

text: non-small cell lung carcinoma

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: lung

text: normal tissue adjacent to neoplasm

text: Homo sapiens

text: male


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: ArrayExpress

characteristic: broker name

text: human

characteristic: common name

text: adult

text: non-small cell lung carcinoma

text: Homo sapiens

text: Homo sapiens

text: lung

text: normal tissue adjacent to neoplasm

text: Homo sapiens

text: female

characteristic: title


text: public

text: ArrayExpress

text: human

text: adult

characteristic: developmental stage

text: non-small cell lung carcinoma

characteristic: disease

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: lung

characteristic: organism part

text: neoplasm

characteristic: sampling site

text: Homo sapiens

text: female


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: collection date

text: Time 0, activated sludge

text: inland

characteristic: environment (biome)

text: bioreactor

characteristic: environment (feature)

text: sewage

characteristic: environment (material)

text: Yes

characteristic: environmental sample

text: Greece

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: bioreactor metagenome

text: 18S_F-TCGTCGGCAGCGTCAGATGTGTATAAGAGACAGCGATAACGAACGAGACCT, 18S_R: 5’- GTC TCG TGG GCT CGG AGA TGT GTA TAA GAG ACA GAN CCA TTC AAT CGG TAN T -3’.

characteristic: pcr primers

text: bioreactor metagenome

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Time 16 days in the bioreactor

characteristic: description

text: inland

text: bioreactor

text: sewage

text: Yes

text: Greece

text: bioreactor metagenome

characteristic: organism

text: bioreactor metagenome

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: collection date

text: Time 58 days in the bioreactor

text: inland

characteristic: environment (biome)

text: bioreactor

characteristic: environment (feature)

text: sewage

characteristic: environment (material)

text: Yes

text: Greece

text: bioreactor metagenome

text: bioreactor metagenome


characteristic: ENA-LAST-UPDATE

text: public

text: Time 87 days in the bioreactor

text: inland

text: bioreactor

text: sewage

text: Yes

characteristic: environmental sample

text: Greece

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: bioreactor metagenome

characteristic: pcr primers

text: bioreactor metagenome

characteristic: target gene

characteristic: target subfragment


characteristic: External Id

text: Institute of Tropical Medicine

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Institute of Tropical Medicine

characteristic: Submitter Id

text: DNA was extracted using a 25% sucrose solution, resulting in a high yield of kinetoplast DNA. Hence, you will find almost exclusively reads originating from the kinetopalst (maxicircles and minicircles)

characteristic: description

text: Trypanosoma congolense IL3000

characteristic: organism

text: Trypanosoma congolense IL3000

text: kinetoplast reads

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: CHALMERS UNIVERSITY OF TECHNOLOGY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:CHALMERS UNIVERSITY OF TECHNOLOGY

text: Alexandra Bergman

characteristic: collected by

characteristic: collection date

text: baker's yeast

characteristic: common name

text: Saccharomyces cerevisiae

characteristic: host scientific name

text: CEN.PK 113-5D

characteristic: lab host

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: CEN.PK 113-5D pSP-GM1

characteristic: strain

text: Transcriptional analysis of Xfpk expression in Saccharomyces cerevisiae


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CHALMERS UNIVERSITY OF TECHNOLOGY

characteristic: INSDC last update

text: public

text: Alexandra Bergman

text: baker's yeast

text: Saccharomyces cerevisiae

text: CEN.PK 113-5D

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: CEN.PK 113-5D pSP-GM1 P(TEF1)-xfpk(BB)


text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 16 days after

text: inland

characteristic: environment (biome)

text: bioreactor

characteristic: environment (feature)

text: sewage

characteristic: environment (material)

text: Greece

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metatranscriptome

characteristic: investigation type

text: bioreactor metagenome

characteristic: project name

text: bioreactor metagenome

text: Illumina

characteristic: sequencing method

text: wastewater/sludge

characteristic: wastewater/sludge environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: collection date

text: 58 days after

characteristic: description

text: inland

text: bioreactor

text: sewage

text: Greece

text: metatranscriptome

text: bioreactor metagenome

characteristic: organism

text: bioreactor metagenome

text: Illumina

characteristic: title

text: wastewater/sludge


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 87 days in the bioreactor

text: inland

characteristic: environment (biome)

text: bioreactor

characteristic: environment (feature)

text: sewage

text: Greece

text: metatranscriptome

text: bioreactor metagenome

text: bioreactor metagenome

text: Illumina

text: wastewater/sludge


text: University Vienna

text: public

text: Pool_18192_18199_12208_12209_12210_12211_12212_12212_12213_12214_12215

tag: Namespace:University Vienna

text: Dumeril's clam worm

characteristic: common name

text: Platynereis dumerilii

text: Platynereis dumerilii

text: Platynereis dumerilii head transcriptome


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF BIRMINGHAM

text: public

tag: Namespace:UNIVERSITY OF BIRMINGHAM

text: Herpes simplex virus (type 1 / strain SC16)

text: Human herpesvirus type 1; 500X coverage

text: HSV-1 A5-5 Red


characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF BIRMINGHAM

text: public

text: Human herpesvirus 2 strain 333

text: Human herpesvirus type 2; 500X coverage

text: Human herpesvirus 2 strain 333

text: Human herpesvirus 2 strain 333

text: HSV-2 A5-5 Red


text: Cancer Research UK Cambridge Institute.

characteristic: INSDC center name

text: public

tag: Namespace:Cancer Research UK Cambridge Institute.

unit: day

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

text: Protocols: Liver from male C3H/HeOuJ mice was collected, at 15 days of age. Samples were snap frozen in liquid nitrogen. Data were aligned using STAR with options --outFilterScoreMinOverLread 0.4 --outFilterMatchNminOverLread 0.4, against the C3H/HeJ genome as a reference (ftp://ftp.ensembl.org/pub/release-89/fasta/mus_musculus_c3hhej/dna/Mus_musculus_c3hhej.C3H_HeJ_v1.dna_sm.toplevel.fa.gz). Total RNA was extracted using the AllPrep 96 DNA/RNA Kit (Qiagen) according to the manufacturer’s instructions. Libraries were prepared using the TruSeq Stranded Total RNA Library Prep Kit with Ribo-Zero Gold (Illumina).

text: wild type genotype

characteristic: genotype

characteristic: individual

text: Mus musculus

text: Mus musculus

text: liver

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: strain


E-MTAB-6974:Sample 1

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Instituto Gulbenkian de Ciencia

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-6974:Sample 1

tag: Namespace:Instituto Gulbenkian de Ciencia

text: ArrayExpress

text: neuron

characteristic: cell type

text: house mouse

text: Protocols: Experiments were carried out in agreement with European Community Council Directive (86/609/EEC) and the animal ethics guidelines of the i3S, and approved by the Portuguese Veterinary Ethics Committee. Dorsal spinal cord tissues were collected from E14.5 embryos and then dissected in ice-cold PBS. Cells were fixed sequentially with di(N-succimidyl) glutarate and 1% formaldehyde in phosphate buffered saline and then lysed, sonicated and immunoprecipitated, as previously described (Castro et al., 2011; Regadas et al, 2014), with an anti-Tlx3 antibody DNA libraries were prepared from 10ng of immunoprecipitated DNA according to the standard Illumina ChIP-seq protocol.

characteristic: description

text: embryonic day 14.5

characteristic: developmental stage

text: Mus musculus

characteristic: organism

text: Mus musculus

text: dorsal spinal cord

text: Mus musculus

text: Sample 1

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Cancer Research UK Cambridge Institute.

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

unit: week

text: ArrayExpress

text: house mouse

characteristic: common name

text: Protocols: Male C3H/HeOuJ mice, which are susceptible to spontaneous liver neoplasms, were aged until they showed clinical signs of tumour development (up to 76 weeks old). Liver tumour sample were dissected and snap frozen in liquid nitrogen. Total RNA was extracted using the AllPrep 96 DNA/RNA Kit (Qiagen) according to the manufacturer’s instructions. Libraries were prepared using the TruSeq Stranded Total RNA Library Prep Kit with Ribo-Zero Gold (Illumina).

text: liver dysplastic nodule

characteristic: disease

text: tumour grade high

characteristic: disease staging

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: liver

text: neoplasm

characteristic: sampling site

text: Mus musculus

text: male


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Cancer Research UK Cambridge Institute.

characteristic: INSDC first public

text: public

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

text: hepatocellular carcinoma

text: well

text: wild type genotype

characteristic: genotype

characteristic: individual

text: Mus musculus

text: Mus musculus

text: liver

characteristic: organism part

text: neoplasm

text: Mus musculus

text: male

characteristic: sex

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Cancer Research UK Cambridge Institute.

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: house mouse

characteristic: description

text: liver dysplastic nodule

text: tumour grade low

text: wild type genotype

text: Mus musculus

characteristic: organism

text: Mus musculus

text: liver

text: neoplasm

text: Mus musculus

text: male

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Cancer Research UK Cambridge Institute.

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: house mouse

characteristic: common name

text: hepatocellular carcinoma

characteristic: disease

text: tumour grade moderate

characteristic: disease staging

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: liver

text: neoplasm

characteristic: sampling site

text: Mus musculus

text: male


text: Department of Zoology

characteristic: INSDC first public

text: public

tag: Namespace:Department of Zoology

text: Barn swallow

text: Hirundo rustica

text: Hirundo rustica

text: Faecal microbiota


wild type exp

characteristic: ENA-CHECKLIST

text: public

text: wild type exp

tag: Namespace:Division of Biosciences, Brunel University

text: gDNA from wild type in exponential phase, Run 2

text: Escherichia coli str. K-12 substr. MG1655

text: wild type exponential growth


wild type stat

characteristic: ENA-FIRST-PUBLIC

text: Division of Biosciences, Brunel University

text: public

text: wild type stat

text: gDNA from wild type in stationary phase, Run 2

text: wild type stationary


recB

characteristic: INSDC center name

text: public

text: recB

text: gDNA from recB in exponential phase, Run 2

text: recB exponential


oriZ tus

characteristic: INSDC last update

text: public

text: oriZ tus

text: gDNA from oriC+ oriZ+ tus in exponential phase, Run 2

text: oriZ tus exponential


recB xonA

text: public

characteristic: INSDC status

text: recB xonA

text: gDNA from recB xonA in exponential phase, Run 2

text: recB xonA exponential


recB xonA sbcCD

text: public

text: recB xonA sbcCD

text: gDNA from recB xonA sbcCD in exponential phase, Run 2

characteristic: description

text: recB xonA sbcCD exponential


recB sbcCD

text: public

text: recB sbcCD

text: gDNA from recB sbcCD in exponential phase, Run 2

characteristic: organism

text: recB sbcCD exponential


recB xseA

text: public

text: recB xseA

text: gDNA from recB xseA in exponential phase, Run 2

text: recB xseA exponential

characteristic: title


recB recJ

characteristic: ENA-LAST-UPDATE

text: public

text: recB recJ

text: gDNA from recB recJ in exponential phase, Run 2

text: recB recJ exponential


recB rpo*

characteristic: External Id

text: public

text: recB rpo*

text: gDNA from recB rpo* in exponential phase, Run 2

text: recB rpo* exponential


oriZ recB rpo*

text: public

characteristic: SRA accession

text: oriZ recB rpo*

text: gDNA from oriZ recB rpo* in exponential phase, Run 2

text: oriZ recB rpo* exponential


oriZ recB tus

text: public

text: oriZ recB tus

characteristic: Submitter Id

text: gDNA from oriZ recB tus in exponential phase, Run 2

text: oriZ recB tus exponential


oriZ recB

text: public

text: oriZ recB

text: oriZ recB tus exponential


text: UNIVERSITY OF TORONTO

text: public

tag: Namespace:UNIVERSITY OF TORONTO

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens


wild type exp R4

text: public

text: wild type exp R4

text: gDNA from wild type cells in exponential growth, Run 4

text: Wild type exponential


wild type stat R4

text: public

text: wild type stat R4

text: gDNA from stationary wild type cells, Run 4

text: Wild type stationary


recB R4

text: public

text: recB R4

text: gDNA from recB cells in exponential growth, Run 4

text: recB exponential


tos+200kb tus recB N15 R4

text: public

text: tos+200kb tus recB N15 R4

text: gDNA from tos+200kb tus recB N15 cells in exponential growth, Run 4

text: tos+200kb tus recB N15 exponential


hipA recB R4

text: public

text: hipA recB R4

text: gDNA from hipA recB cells in exponential growth, Run 4

text: Escherichia coli str. K-12 substr. MG1655

text: hipA recB exponential


hipB recB R4

text: Division of Biosciences, Brunel University

text: public

text: hipB recB R4

text: gDNA from hipB recB cells in exponential growth, Run 4

text: hipB recB exponential


Wild type exp R5

text: public

text: Wild type exp R5

text: gDNA from exponentially growing wild type cells, Run 5

text: Wild type exponential


Wild type stat R5

text: public

text: Wild type stat R5

text: gDNA from stationary wild type cells, Run 5

text: Wild type stationary


oriZ R5

text: public

text: oriZ R5

text: gDNA from exponentially growing oriC oriZ cells, Run 5

text: oriZ exponential


oriZ rep R5

text: public

text: oriZ rep R5

text: gDNA from exponentially growing oriC oriZ rep cells, Run 5

text: oriZ rep exponential


oriZ rep rpo* R5

text: public

text: oriZ rep rpo* R5

text: gDNA from exponentially growing oriC oriZ rep rpo* cells, Run 5

text: oriZ rep rpo* exponential


oriX R5

text: public

text: oriX R5

text: gDNA from exponentially growing oriC oriX cells, Run 5

text: oriX exponential


oriX recB R5

text: public

text: oriX recB R5

text: gDNA from exponentially growing oriX recB cells, Run 5

text: oriX recB exponential


oriX recB rpo* R5

text: public

text: oriX recB rpo* R5

text: gDNA from exponentially growing oriX recB rpo* cells, Run 5

text: oriX recB rpo* exponential


Wild type exp R8

text: public

text: Wild type exp R8

text: gDNA from exponentially growing wild type cells, Run 8

text: Wild type exponential


Wild type stat R8

text: public

text: Wild type stat R8

text: gDNA from stationary wild type cells, Run 8

text: Wild type stationary


recB tos R8

text: public

text: recB tos R8

text: gDNA from exponentially growing recB tos cells, Run 8

text: recB tos exponential


recB N15 R8

text: public

text: recB N15 R8

text: gDNA from exponentially growing recB N15 cells, Run 8

text: recB N15 exponential


recB tos N15 R8

text: public

text: recB tos N15 R8

text: gDNA from exponentially growing recB tos N15 cells, Run 8

text: recB tos N15 exponential


recB tus tos R8

text: public

text: recB tus tos R8

text: gDNA from exponentially growing recB tus tos cells, Run 8

text: recB tus tos exponential


recB tus tos N15 R8

text: public

text: recB tus tos N15 R8

text: gDNA from exponentially growing recB tus tos N15 cells, Run 8

text: Escherichia coli str. K-12 substr. MG1655

text: recB tus tos N15 exponential


recB sbcCD rpo* R8

text: Division of Biosciences, Brunel University

text: public

text: recB sbcCD rpo* R8

text: gDNA from exponentially growing recB sbcCD rpo* cells, Run 8

text: recB sbcCD rpo* exponential


oriZ sbcCD R8

text: public

text: oriZ sbcCD R8

text: gDNA from exponentially growing oriC oriZ sbcCD cells, Run 8

text: oriZ sbcCD exponential


oriZ recB R8

text: public

text: oriZ recB R8

text: gDNA from exponentially growing oriC oriZ recB cells, Run 8

text: oriZ recB exponential


oriZ sbcCD recB R8

text: public

text: oriZ sbcCD recB R8

text: gDNA from exponentially growing oriZ sbcCD recB cells, Run 8

text: oriZ sbcCD recB exponential


spirodela polyrhiza 9509

text: J CRAIG VENTER INSTITUTE

text: public

text: spirodela polyrhiza 9509

tag: Namespace:J CRAIG VENTER INSTITUTE

characteristic: collection date

text: great duckweed

text: Oxford Nanopore reads for the Spirodela polyrhiza clone 9509

characteristic: estimated size

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: growth chamber

characteristic: growth facility

text: long days

characteristic: isolation and growth condition

characteristic: number of replicons

text: Spirodela polyrhiza

text: Greater Duckweed

characteristic: organism common name

text: juvenile

characteristic: plant developmental stage

text: Shenk and Hildebrand (SH) media

characteristic: plant growth medium

text: frond

characteristic: plant structure

text: diploid

characteristic: ploidy

text: light dark

characteristic: propagation

text: healthy

characteristic: sample disease status

text: healthy

characteristic: sample health state

text: Spirodela polyrhiza

text: frond

characteristic: source material identifiers

characteristic: subspecific genetic lineage name

text: ecotype

characteristic: subspecific genetic lineage rank

text: Spirodela polyrhiza clone 9509 Oxford Nanopore raw reads


Spirodela polyrhiza 95092

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: J CRAIG VENTER INSTITUTE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Spirodela polyrhiza 95092

characteristic: Submitter Id

characteristic: collection date

text: great duckweed

characteristic: common name

text: Spirodela polyrhiza 9509 version 3 assembly using Oxford Nanopore

characteristic: description

characteristic: estimated size

text: Germany

characteristic: geographic location (country and/or sea)

text: light/dark

text: Spirodela polyrhiza

characteristic: organism

text: Greater Duckweed

text: juvenile

text: Shenk and Hildebrand (SH) media

text: frond

text: diploid

text: Spirodela polyrhiza

text: ecotype

text: Spirodela polyrhiza 9509 v3

characteristic: title


characteristic: ENA-CHECKLIST

text: DTU-GE

text: public

text: DTU-GE

characteristic: broker name

text: Global sewage consortium

characteristic: collected by

text: Yes

characteristic: environmental sample

text: Ecuador

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: wastewater

characteristic: isolation source non-host-associated

text: wastewater metagenome

text: wastewater metagenome

characteristic: strain


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: DTU-GE

text: Global sewage consortium

characteristic: collection date

text: Yes

text: Malawi

text: No

text: wastewater

text: wastewater metagenome

text: wastewater metagenome


characteristic: ENA-CHECKLIST

text: DTU-GE

text: public

text: DTU-GE

characteristic: broker name

text: Global sewage consortium

characteristic: collected by

text: Yes

characteristic: environmental sample

text: Iceland

characteristic: geographic location (country and/or sea)

text: No

text: wastewater

text: wastewater metagenome

characteristic: organism

text: wastewater metagenome


text: DTU-GE

text: public

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Poland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: wastewater

characteristic: isolation source non-host-associated

text: wastewater metagenome

text: wastewater metagenome

characteristic: strain


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Nigeria

text: No

text: wastewater

text: wastewater metagenome

text: wastewater metagenome


characteristic: ENA-CHECKLIST

text: DTU-GE

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: DTU-GE

characteristic: broker name

text: Global sewage consortium

characteristic: collection date

text: Yes

text: Cote d'Ivoire

text: No

text: wastewater

text: wastewater metagenome

text: wastewater metagenome


text: DTU-GE

text: public

text: DTU-GE

text: Global sewage consortium

characteristic: collected by

text: Yes

characteristic: environmental sample

text: Nicaragua

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

text: wastewater

text: wastewater metagenome

characteristic: organism

text: wastewater metagenome


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: DTU-GE

text: public

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Malaysia

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: wastewater

characteristic: isolation source non-host-associated

text: wastewater metagenome

text: wastewater metagenome

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: External Id

text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Tanzania

text: No

text: wastewater

text: wastewater metagenome

text: wastewater metagenome


text: DTU-GE

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: DTU-GE

characteristic: broker name

text: Global sewage consortium

characteristic: collected by

characteristic: collection date

text: Yes

characteristic: environmental sample

text: Estonia

text: No

text: wastewater

text: wastewater metagenome

text: wastewater metagenome


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: DTU-GE

text: public

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Thailand

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

text: wastewater

text: wastewater metagenome

characteristic: organism

text: wastewater metagenome


characteristic: ENA-CHECKLIST

characteristic: External Id

text: DTU-GE

text: public

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Georgia

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: wastewater

characteristic: isolation source non-host-associated

text: wastewater metagenome

text: wastewater metagenome

characteristic: strain


text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Croatia

text: No

text: wastewater

text: wastewater metagenome

text: wastewater metagenome


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: DTU-GE

text: public

text: DTU-GE

characteristic: broker name

text: Global sewage consortium

characteristic: collected by

characteristic: collection date

text: Yes

characteristic: environmental sample

text: South Africa

text: No

text: wastewater

text: wastewater metagenome

text: wastewater metagenome


characteristic: ENA-CHECKLIST

characteristic: External Id

text: DTU-GE

text: public

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Luxembourg

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

text: wastewater

text: wastewater metagenome

characteristic: organism

text: wastewater metagenome


text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Italy

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: wastewater

characteristic: isolation source non-host-associated

text: wastewater metagenome

text: wastewater metagenome

characteristic: strain


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: DTU-GE

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: DTU-GE

text: Global sewage consortium

text: Yes

text: South Korea

text: No

text: wastewater

text: wastewater metagenome

text: wastewater metagenome


characteristic: ENA-CHECKLIST

characteristic: External Id

text: DTU-GE

text: public

text: DTU-GE

characteristic: broker name

text: Global sewage consortium

characteristic: collected by

characteristic: collection date

text: Yes

characteristic: environmental sample

text: Greece

text: No

text: wastewater

text: wastewater metagenome

text: wastewater metagenome


text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Australia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

text: wastewater

text: wastewater metagenome

characteristic: organism

text: wastewater metagenome


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: DTU-GE

text: public

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Portugal

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: wastewater

characteristic: isolation source non-host-associated

text: wastewater metagenome

text: wastewater metagenome

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: External Id

text: DTU-GE

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: DTU-GE

text: Global sewage consortium

text: Yes

text: United Kingdom

text: No

text: wastewater

text: wastewater metagenome

text: wastewater metagenome


text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DTU-GE

characteristic: broker name

text: Global sewage consortium

characteristic: collected by

characteristic: collection date

text: Yes

characteristic: environmental sample

text: Canada

text: No

text: wastewater

text: wastewater metagenome

text: wastewater metagenome


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: DTU-GE

text: public

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Cameroon

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

text: wastewater

text: wastewater metagenome

characteristic: organism

text: wastewater metagenome


characteristic: ENA-CHECKLIST

characteristic: External Id

text: DTU-GE

text: public

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Bulgaria

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: wastewater

characteristic: isolation source non-host-associated

text: wastewater metagenome

text: wastewater metagenome

characteristic: strain


text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Uganda

text: No

text: wastewater

text: wastewater metagenome

text: wastewater metagenome


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: DTU-GE

text: public

text: DTU-GE

characteristic: broker name

text: Global sewage consortium

characteristic: collected by

characteristic: collection date

text: Yes

characteristic: environmental sample

text: India

text: No

text: wastewater

text: wastewater metagenome

text: wastewater metagenome


characteristic: ENA-CHECKLIST

characteristic: External Id

text: DTU-GE

text: public

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

text: wastewater

text: wastewater metagenome

characteristic: organism

text: wastewater metagenome


text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Pakistan

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: wastewater

characteristic: isolation source non-host-associated

text: wastewater metagenome

text: wastewater metagenome

characteristic: strain


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: DTU-GE

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Burkina Faso

text: No

text: wastewater

text: wastewater metagenome

text: wastewater metagenome


characteristic: ENA-CHECKLIST

characteristic: External Id

text: DTU-GE

text: public

text: DTU-GE

characteristic: broker name

text: Global sewage consortium

characteristic: collected by

characteristic: collection date

text: Yes

characteristic: environmental sample

text: Hong Kong

text: No

text: wastewater

text: wastewater metagenome

text: wastewater metagenome


text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Singapore

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

text: wastewater

text: wastewater metagenome

characteristic: organism

text: wastewater metagenome


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: DTU-GE

text: public

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Paraguay

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: wastewater

characteristic: isolation source non-host-associated

text: wastewater metagenome

text: wastewater metagenome

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: External Id

text: DTU-GE

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Nepal

text: No

text: wastewater

text: wastewater metagenome

text: wastewater metagenome


text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DTU-GE

characteristic: broker name

text: Global sewage consortium

characteristic: collected by

characteristic: collection date

text: Yes

characteristic: environmental sample

text: Cambodia

text: No

text: wastewater

text: wastewater metagenome

text: wastewater metagenome


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: DTU-GE

text: public

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Guatemala

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

text: wastewater

text: wastewater metagenome

characteristic: organism

text: wastewater metagenome


characteristic: ENA-CHECKLIST

characteristic: External Id

text: DTU-GE

text: public

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Lithuania

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: wastewater

characteristic: isolation source non-host-associated

text: wastewater metagenome

text: wastewater metagenome

characteristic: strain


text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Kenya

text: No

text: wastewater

text: wastewater metagenome

text: wastewater metagenome


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: DTU-GE

text: public

text: DTU-GE

characteristic: broker name

text: Global sewage consortium

characteristic: collected by

characteristic: collection date

text: Yes

characteristic: environmental sample

text: Kazakhstan

text: No

text: wastewater

text: wastewater metagenome

text: wastewater metagenome


characteristic: ENA-CHECKLIST

characteristic: External Id

text: DTU-GE

text: public

text: DTU-GE

text: Global sewage consortium

text: Yes

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

text: wastewater

text: wastewater metagenome

characteristic: organism

text: wastewater metagenome


text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Macedonia

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: wastewater

characteristic: isolation source non-host-associated

text: wastewater metagenome

text: wastewater metagenome

characteristic: strain


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: DTU-GE

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Viet Nam

text: No

text: wastewater

text: wastewater metagenome

text: wastewater metagenome


characteristic: ENA-CHECKLIST

characteristic: External Id

text: DTU-GE

text: public

text: DTU-GE

characteristic: broker name

text: Global sewage consortium

characteristic: collected by

characteristic: collection date

text: Yes

characteristic: environmental sample

text: Ghana

text: No

text: wastewater

text: wastewater metagenome

text: wastewater metagenome


text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Iran

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

text: wastewater

text: wastewater metagenome

characteristic: organism

text: wastewater metagenome


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: DTU-GE

text: public

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Morocco

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: wastewater

characteristic: isolation source non-host-associated

text: wastewater metagenome

text: wastewater metagenome

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: External Id

text: DTU-GE

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Sri Lanka

text: No

text: wastewater

text: wastewater metagenome

text: wastewater metagenome


text: DTU-GE

characteristic: INSDC center name

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characteristic: broker name

text: Global sewage consortium

characteristic: collected by

characteristic: collection date

text: Yes

characteristic: environmental sample

text: Sri Lanka

text: 79. 885176

text: No

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text: wastewater metagenome

text: wastewater metagenome


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: DTU-GE

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text: Yes

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characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

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text: wastewater metagenome


characteristic: ENA-CHECKLIST

characteristic: External Id

text: DTU-GE

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text: Yes

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text: No

characteristic: is the sequenced pathogen host associated?

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text: public

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characteristic: Submitter Id

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text: Global sewage consortium

text: Yes

text: Malaysia

text: No

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characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: DTU-GE

text: public

text: DTU-GE

characteristic: broker name

text: Global sewage consortium

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text: Yes

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text: No

text: wastewater

text: wastewater metagenome

text: wastewater metagenome


characteristic: ENA-CHECKLIST

characteristic: External Id

text: DTU-GE

text: public

text: DTU-GE

text: Global sewage consortium

text: Yes

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characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

text: wastewater

text: wastewater metagenome

characteristic: organism

text: wastewater metagenome


text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Netherlands

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: wastewater

characteristic: isolation source non-host-associated

text: wastewater metagenome

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characteristic: ENA-FIRST-PUBLIC

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text: public

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text: DTU-GE

text: Global sewage consortium

text: Yes

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text: No

text: wastewater

text: wastewater metagenome

text: wastewater metagenome


characteristic: ENA-CHECKLIST

characteristic: External Id

text: DTU-GE

text: public

text: DTU-GE

characteristic: broker name

text: Global sewage consortium

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text: Yes

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text: No

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text: wastewater metagenome

text: wastewater metagenome


text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Portugal

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

text: wastewater

text: wastewater metagenome

characteristic: organism

text: wastewater metagenome


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: DTU-GE

text: public

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Germany

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: wastewater

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text: wastewater metagenome

text: wastewater metagenome

characteristic: strain


characteristic: ENA-CHECKLIST

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text: DTU-GE

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Albania

text: No

text: wastewater

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text: wastewater metagenome


text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DTU-GE

characteristic: broker name

text: Global sewage consortium

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characteristic: collection date

text: Yes

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text: New Zealand

text: No

text: wastewater

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text: wastewater metagenome


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: DTU-GE

text: public

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

text: wastewater

text: wastewater metagenome

characteristic: organism

text: wastewater metagenome


characteristic: ENA-CHECKLIST

characteristic: External Id

text: DTU-GE

text: public

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Philippines

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: wastewater

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text: wastewater metagenome

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characteristic: strain


text: DTU-GE

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text: public

characteristic: INSDC status

characteristic: SRA accession

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text: DTU-GE

text: Global sewage consortium

text: Yes

text: France

text: No

text: wastewater

text: wastewater metagenome

text: wastewater metagenome


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: DTU-GE

text: public

text: DTU-GE

characteristic: broker name

text: Global sewage consortium

characteristic: collected by

characteristic: collection date

text: Yes

characteristic: environmental sample

text: Switzerland

text: No

text: wastewater

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text: wastewater metagenome


characteristic: ENA-CHECKLIST

characteristic: External Id

text: DTU-GE

text: public

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Slovenia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

text: wastewater

text: wastewater metagenome

characteristic: organism

text: wastewater metagenome


text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Sweden

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: wastewater

characteristic: isolation source non-host-associated

text: wastewater metagenome

text: wastewater metagenome

characteristic: strain


characteristic: ENA-FIRST-PUBLIC

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text: DTU-GE

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Italy

text: No

text: wastewater

text: wastewater metagenome

text: wastewater metagenome


characteristic: ENA-CHECKLIST

characteristic: External Id

text: DTU-GE

text: public

text: DTU-GE

characteristic: broker name

text: Global sewage consortium

characteristic: collected by

characteristic: collection date

text: Yes

characteristic: environmental sample

text: Ireland

text: No

text: wastewater

text: wastewater metagenome

text: wastewater metagenome


text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DTU-GE

text: Global sewage consortium

text: Yes

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characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

text: wastewater

text: wastewater metagenome

characteristic: organism

text: wastewater metagenome


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: DTU-GE

text: public

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Austria

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: wastewater

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text: wastewater metagenome

text: wastewater metagenome

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: External Id

text: DTU-GE

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text: public

characteristic: INSDC status

characteristic: SRA accession

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text: DTU-GE

text: Global sewage consortium

text: Yes

text: Senegal

text: No

text: wastewater

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text: wastewater metagenome


text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DTU-GE

characteristic: broker name

text: Global sewage consortium

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characteristic: collection date

text: Yes

characteristic: environmental sample

text: Montenegro

text: No

text: wastewater

text: wastewater metagenome

text: wastewater metagenome


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: DTU-GE

text: public

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Ethiopia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

text: wastewater

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characteristic: organism

text: wastewater metagenome


characteristic: ENA-CHECKLIST

characteristic: External Id

text: DTU-GE

text: public

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Serbia

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: wastewater

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text: wastewater metagenome

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characteristic: strain


text: DTU-GE

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text: public

characteristic: INSDC status

characteristic: SRA accession

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text: DTU-GE

text: Global sewage consortium

text: Yes

text: Finland

text: No

text: wastewater

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text: wastewater metagenome


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: DTU-GE

text: public

text: DTU-GE

characteristic: broker name

text: Global sewage consortium

characteristic: collected by

characteristic: collection date

text: Yes

characteristic: environmental sample

text: Czech Republic

text: No

text: wastewater

text: wastewater metagenome

text: wastewater metagenome


characteristic: ENA-CHECKLIST

characteristic: External Id

text: DTU-GE

text: public

text: DTU-GE

text: Global sewage consortium

text: Yes

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

text: wastewater

text: wastewater metagenome

characteristic: organism

text: wastewater metagenome


text: DTU-GE

characteristic: INSDC center name

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text: public

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text: Yes

text: Tanzania

text: No

characteristic: is the sequenced pathogen host associated?

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text: wastewater

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text: wastewater metagenome

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text: public

characteristic: INSDC status

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characteristic: Submitter Id

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Paraguay

text: No

text: wastewater

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text: wastewater metagenome


characteristic: ENA-CHECKLIST

characteristic: External Id

text: DTU-GE

text: public

text: DTU-GE

characteristic: broker name

text: Global sewage consortium

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characteristic: collection date

text: Yes

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text: Barbados

text: No

text: wastewater

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text: wastewater metagenome


text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DTU-GE

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text: Yes

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characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

text: wastewater

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characteristic: organism

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characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: DTU-GE

text: public

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text: Yes

text: Bangladesh

text: No

characteristic: is the sequenced pathogen host associated?

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text: public

characteristic: INSDC status

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text: DTU-GE

text: Global sewage consortium

text: Yes

text: Slovakia

text: No

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text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

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text: Yes

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text: No

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characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: DTU-GE

text: public

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text: Yes

text: Latvia

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characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

text: wastewater

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text: wastewater metagenome


characteristic: ENA-CHECKLIST

characteristic: External Id

text: DTU-GE

text: public

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text: Global sewage consortium

text: Yes

text: Germany

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: wastewater

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text: public

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text: DTU-GE

text: Global sewage consortium

text: Yes

text: Mauritius

text: No

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text: wastewater metagenome


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: DTU-GE

text: public

text: DTU-GE

characteristic: broker name

text: Global sewage consortium

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characteristic: collection date

text: Yes

characteristic: environmental sample

text: Israel

text: No

text: wastewater

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text: wastewater metagenome


characteristic: ENA-CHECKLIST

characteristic: External Id

text: DTU-GE

text: public

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Bosnia and Herzegovina

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: No

text: wastewater

text: wastewater metagenome

characteristic: organism

text: wastewater metagenome


text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Australia

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: wastewater

characteristic: isolation source non-host-associated

text: wastewater metagenome

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characteristic: strain


characteristic: ENA-FIRST-PUBLIC

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text: DTU-GE

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: DTU-GE

text: Global sewage consortium

text: Yes

text: Chad

text: No

text: wastewater

text: wastewater metagenome

text: wastewater metagenome