characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.COPD1061.T

text: No

text: No

text: Yes

text: No

text: Yes

text: No

characteristic: bmi

text: 2016-02-26 00:00

text: 12/15/15 0:00

text: stool sample

characteristic: description

text: TRUE

characteristic: elevation

characteristic: emp status

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

characteristic: enterotype

text: Urban Biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: non-hispanic

characteristic: ethnicity

text: Male

characteristic: gender

text: USA:CO:Aurora

characteristic: geo loc name

characteristic: high risk

text: Positive

characteristic: hiv

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human

text: adult

text: Homo sapiens

text: years

text: cm

text: kg

text: No

text: Yes

text: 9/15/16 0:00

text: MSM

text: 12/9/14 0:00

text: No

text: human gut metagenome

text: No

text: UCD-AMC

text: FALSE

text: White

text: Never

text: stool

text: human gut metagenome

text: male

text: Bisexual

text: treated


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: qiita_sid_11914:11914.St.chronic.COPD1063.T

characteristic: Submitter Id

text: Agumentin

characteristic: antibiotic type

text: Yes

text: No

text: Yes

text: No

text: Yes

text: No

text: 2016-03-15 00:00

text: 7/1/15 0:00

text: stool sample

text: TRUE

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

text: Urban Biome

text: human-associated habitat

text: human-gut

text: feces

text: non-hispanic

text: Male

text: USA:CO:Aurora

text: Positive

text: UBERON:feces

characteristic: host body habitat

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

characteristic: host height

text: adult

characteristic: host life stage

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: years

text: cm

text: kg

text: No

characteristic: latitude

text: Yes

text: 9/28/16 0:00

characteristic: longitude

characteristic: miseq run

text: MSM

text: 1/1/06 0:00

text: No

text: human gut metagenome

text: Yes

text: UCD-AMC

text: FALSE

text: White

text: stool

text: human gut metagenome

text: male

text: Gay

text: An exploration of Prevotella-rich microbiomes in HIV and men who have sex with men

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.COPD1077.T

text: No

text: No

text: Yes

text: No

text: Yes

text: No

characteristic: bmi

text: 2016-09-23 00:00

text: stool sample

characteristic: description

text: TRUE

characteristic: elevation

characteristic: emp status

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

characteristic: enterotype

text: Urban Biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: non-hispanic

characteristic: ethnicity

text: Male

characteristic: gender

text: USA:CO:Aurora

characteristic: geo loc name

characteristic: high risk

text: Positive

characteristic: hiv

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human

text: adult

text: Homo sapiens

text: years

text: cm

text: kg

text: No

text: Yes

text: 9/27/16 0:00

text: MSM

text: 1/1/14 0:00

text: No

text: human gut metagenome

characteristic: organism

text: Yes

text: UCD-AMC

text: FALSE

text: White

text: < 1 time per week

text: stool

text: human gut metagenome

text: male

text: Gay

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: qiita_sid_11914:11914.St.chronic.COPD1079.T

characteristic: Submitter Id

text: doxycycline

characteristic: antibiotic type

text: Yes

text: No

text: Yes

text: No

text: Yes

text: No

text: 2016-10-13 00:00

text: 4/1/16 0:00

text: stool sample

text: TRUE

text: Host-associated

text: Animal

text: Animal distal gut

text: Bacteroides

text: Urban Biome

text: human-associated habitat

text: human-gut

text: feces

text: non-hispanic

text: Male

text: USA:CO:Aurora

text: Positive

text: UBERON:feces

characteristic: host body habitat

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

characteristic: host height

text: adult

characteristic: host life stage

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: years

text: cm

text: kg

text: No

characteristic: latitude

text: Yes

text: 10/14/16 0:00

characteristic: longitude

characteristic: miseq run

text: MSM

text: 1/1/94 0:00

text: No

text: human gut metagenome

text: No

text: UCD-AMC

text: FALSE

text: White

text: Never

text: stool

text: human gut metagenome

text: male

text: Gay

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.DM001.1.T

text: No

text: Yes

text: No

text: Yes

text: No

characteristic: bmi

text: 2016-03-30 00:00

text: 3/1/14 0:00

text: stool sample

characteristic: description

text: TRUE

characteristic: elevation

characteristic: emp status

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

characteristic: enterotype

text: Urban Biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: non-hispanic

characteristic: ethnicity

text: Male

characteristic: gender

text: USA:CO:Aurora

characteristic: geo loc name

characteristic: high risk

text: Positive

characteristic: hiv

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human

text: adult

text: Homo sapiens

text: years

text: cm

text: kg

text: No

text: MSM

text: 1/1/95 0:00

text: human gut metagenome

characteristic: organism

text: UCD-AMC

text: TRUE

text: White

characteristic: race

text: stool

text: human gut metagenome

text: male

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.DM002.1.T

characteristic: Submitter Id

text: No

text: No

text: Yes

text: No

text: No

text: 2016-02-10 00:00

text: 4/1/12 0:00

text: stool sample

text: TRUE

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

text: Urban Biome

text: human-associated habitat

text: human-gut

text: feces

text: non-hispanic

text: Male

text: USA:CO:Aurora

text: Positive

text: UBERON:feces

characteristic: host body habitat

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

characteristic: host height

text: adult

characteristic: host life stage

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: years

text: cm

text: kg

characteristic: latitude

text: No

characteristic: longitude

characteristic: miseq run

text: MSM

text: human gut metagenome

text: UCD-AMC

text: TRUE

text: White

text: stool

text: human gut metagenome

text: male

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: qiita_sid_11914:11914.St.chronic.DM007.1.T

text: Yes

text: Yes

text: Yes

text: Yes

text: No

characteristic: bmi

text: 2016-05-04 00:00

text: 1/1/11 0:00

text: stool sample

characteristic: description

text: TRUE

characteristic: elevation

characteristic: emp status

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

characteristic: enterotype

text: Urban Biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: non-hispanic

characteristic: ethnicity

text: Male

characteristic: gender

text: USA:CO:Aurora

characteristic: geo loc name

characteristic: high risk

text: Positive

characteristic: hiv

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human

text: adult

text: Homo sapiens

text: years

text: cm

text: kg

text: No

text: MSM

text: 1/1/93 0:00

text: human gut metagenome

characteristic: organism

text: UCD-AMC

text: TRUE

text: White

characteristic: race

text: stool

text: human gut metagenome

text: male

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.DM009.1.T

characteristic: Submitter Id

text: No

text: Yes

text: No

text: Yes

text: No

text: 2016-03-30 00:00

text: 9/1/12 0:00

text: stool sample

text: TRUE

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

text: Urban Biome

text: human-associated habitat

text: human-gut

text: feces

text: non-hispanic

text: Male

text: USA:CO:Aurora

text: Positive

text: UBERON:feces

characteristic: host body habitat

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

characteristic: host height

text: adult

characteristic: host life stage

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: years

text: cm

text: kg

text: No

characteristic: latitude

text: Yes

text: 2/9/16 0:00

characteristic: longitude

characteristic: miseq run

text: MSM

text: 9/1/10 0:00

text: No

text: human gut metagenome

text: No

text: UCD-AMC

text: TRUE

text: White

text: Never

text: stool

text: human gut metagenome

text: male

text: Gay

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: qiita_sid_11914:11914.St.chronic.DM019.1.T

characteristic: bmi

text: 2016-06-22 00:00

text: stool sample

characteristic: description

text: TRUE

characteristic: elevation

characteristic: emp status

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

characteristic: enterotype

text: Urban Biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: non-hispanic

characteristic: ethnicity

text: Male

characteristic: gender

text: USA:CO:Aurora

characteristic: geo loc name

characteristic: high risk

text: Positive

characteristic: hiv

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human

text: adult

text: Homo sapiens

text: years

text: cm

text: kg

text: No

text: Yes

text: 6/17/16 0:00

text: MSM

text: No

text: human gut metagenome

characteristic: organism

text: No

text: UCD-AMC

text: TRUE

text: White

characteristic: race

text: >1 time per week

text: stool

characteristic: sample type

text: human gut metagenome

text: male

text: Gay

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.DM025.1.T

characteristic: Submitter Id

text: No

text: No

text: Yes

text: No

text: Yes

text: No

characteristic: bmi

text: 2016-09-28 00:00

text: 12/11/15 0:00

text: stool sample

text: TRUE

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

text: Urban Biome

text: human-associated habitat

text: human-gut

text: feces

text: non-hispanic

text: Male

text: USA:CO:Aurora

text: Positive

text: UBERON:feces

characteristic: host body habitat

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

characteristic: host height

text: adult

characteristic: host life stage

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: years

text: cm

text: kg

text: No

characteristic: latitude

text: Yes

text: 9/1/16 0:00

characteristic: longitude

characteristic: miseq run

text: MSM

text: No

text: human gut metagenome

text: No

text: UCD-AMC

text: TRUE

text: White

text: Never

text: stool

text: human gut metagenome

text: male

text: Gay

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.DM030.1.T

text: No

text: No

text: Yes

text: No

text: Yes

text: No

text: 2016-09-28 00:00

text: 1/26/16 0:00

text: stool sample

characteristic: description

text: TRUE

characteristic: elevation

characteristic: emp status

text: Host-associated

text: Animal

text: Animal distal gut

text: Bacteroides

characteristic: enterotype

text: Urban Biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: non-hispanic

characteristic: ethnicity

text: Female

characteristic: gender

text: USA:CO:Aurora

characteristic: geo loc name

characteristic: high risk

text: Positive

characteristic: hiv

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human

text: adult

text: Homo sapiens

text: years

text: cm

text: kg

text: No

text: Yes

text: 9/20/16 0:00

text: Female

text: No

text: human gut metagenome

characteristic: organism

text: No

text: UCD-AMC

text: TRUE

text: White

text: Never

text: stool

text: human gut metagenome

text: female

text: Heterosexual

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: qiita_sid_11914:11914.St.chronic.DM032.1.T

characteristic: Submitter Id

text: No

text: No

text: No

text: No

text: Yes

text: Yes

characteristic: bmi

text: 2016-09-28 00:00

text: 6/1/16 0:00

text: stool sample

text: TRUE

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

text: Urban Biome

text: human-associated habitat

text: human-gut

text: feces

text: non-hispanic

text: Male

text: USA:CO:Aurora

text: Positive

text: UBERON:feces

characteristic: host body habitat

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

characteristic: host height

text: adult

characteristic: host life stage

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: years

text: cm

text: kg

text: No

characteristic: latitude

text: Yes

text: 9/15/16 0:00

characteristic: longitude

characteristic: miseq run

text: MSM

text: Yes

text: human gut metagenome

text: No

text: UCD-AMC

text: TRUE

text: White

text: < 1 time per week

text: stool

text: human gut metagenome

text: male

text: Gay

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.GLD003.T

text: No

text: Yes

text: No

text: Yes

text: No

text: 2014-11-25 00:00

text: 11/25/14 0:00

text: stool sample

characteristic: description

text: TRUE

characteristic: elevation

characteristic: emp status

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

characteristic: enterotype

text: Urban Biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: non-hispanic

characteristic: ethnicity

text: Male

characteristic: gender

text: USA:CO:Aurora

characteristic: geo loc name

characteristic: high risk

text: Positive

characteristic: hiv

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human

text: adult

text: Homo sapiens

text: years

text: cm

text: kg

text: No

text: Yes

text: 11/22/16 0:00

text: MSW

text: 11/19/08 0:00

text: No

text: human gut metagenome

characteristic: organism

text: No

text: UCD-AMC

text: TRUE

text: White

text: Never

text: stool

text: human gut metagenome

text: male

text: Heterosexual

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: qiita_sid_11914:11914.St.chronic.GLD004.U

characteristic: Submitter Id

text: azithromycin 7/2014 infection

characteristic: antibiotic type

text: Yes

text: No

text: No

text: No

text: No

text: No

characteristic: bmi

text: 2014-11-07 00:00

text: stool sample

text: TRUE

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

text: Urban Biome

text: human-associated habitat

text: human-gut

text: feces

text: hispanic

text: Male

text: USA:CO:Aurora

text: Positive

text: UBERON:feces

characteristic: host body habitat

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

characteristic: host height

text: adult

characteristic: host life stage

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: years

text: cm

text: kg

characteristic: latitude

text: No

characteristic: longitude

characteristic: miseq run

text: MSM

text: 7/23/14 0:00

text: human gut metagenome

text: UCD-AMC

text: TRUE

text: White

text: stool

text: human gut metagenome

text: male

text: untreated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.GLD005.T

characteristic: Submitter Id

text: clindamycin

text: Yes

text: No

text: No

text: Yes

text: Yes

text: No

text: 2015-01-16 00:00

text: 1/15/13 0:00

text: stool sample

characteristic: description

text: TRUE

characteristic: elevation

characteristic: emp status

text: Host-associated

text: Animal

text: Animal distal gut

text: Bacteroides

characteristic: enterotype

text: Urban Biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: non-hispanic

characteristic: ethnicity

text: Female

characteristic: gender

text: USA:CO:Aurora

characteristic: geo loc name

characteristic: high risk

text: Positive

characteristic: hiv

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human

text: adult

text: Homo sapiens

text: years

text: cm

text: kg

text: No

text: Female

text: 4/28/13 0:00

text: human gut metagenome

characteristic: organism

text: UCD-AMC

text: TRUE

text: White

text: stool

text: human gut metagenome

text: female

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: qiita_sid_11914:11914.St.chronic.GLD007.U

text: No

text: No

text: No

text: No

text: No

text: No

characteristic: bmi

text: 2014-12-16 00:00

text: stool sample

text: TRUE

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

text: Urban Biome

text: human-associated habitat

text: human-gut

text: feces

text: non-hispanic

text: Male

text: USA:CO:Aurora

text: Positive

text: UBERON:feces

characteristic: host body habitat

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

characteristic: host height

text: adult

characteristic: host life stage

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: years

text: cm

text: kg

text: No

characteristic: latitude

text: Yes

text: 8/8/16 0:00

characteristic: longitude

characteristic: miseq run

text: MSM

text: 10/14/14 0:00

text: Yes

text: human gut metagenome

text: Yes

text: UCD-AMC

text: TRUE

text: White

text: < 1 time per week

text: stool

text: human gut metagenome

text: male

text: Gay

text: untreated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.GLD009.T

characteristic: Submitter Id

text: No

text: No

text: No

text: No

text: Yes

text: Yes

text: 2014-12-18 00:00

text: 1/1/09 0:00

text: stool sample

characteristic: description

text: TRUE

characteristic: elevation

characteristic: emp status

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

characteristic: enterotype

text: Urban Biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: non-hispanic

characteristic: ethnicity

text: Male

characteristic: gender

text: USA:CO:Aurora

characteristic: geo loc name

characteristic: high risk

text: Positive

characteristic: hiv

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human

text: adult

text: Homo sapiens

text: years

text: cm

text: kg

text: No

text: Yes

text: 10/18/16 0:00

text: MSM

text: No

text: human gut metagenome

characteristic: organism

text: No

text: UCD-AMC

text: TRUE

text: Black/African American

text: Never

text: stool

text: human gut metagenome

text: male

text: Bisexual

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: qiita_sid_11914:11914.St.chronic.GLD014.T

text: No

text: No

text: Yes

text: No

text: Yes

text: No

characteristic: bmi

text: 2015-02-11 00:00

text: 1/1/13 0:00

text: stool sample

text: TRUE

text: Host-associated

text: Animal

text: Animal distal gut

text: Bacteroides

text: Urban Biome

text: human-associated habitat

text: human-gut

text: feces

text: non-hispanic

text: Female

text: USA:CO:Aurora

text: Positive

text: UBERON:feces

characteristic: host body habitat

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

characteristic: host height

text: adult

characteristic: host life stage

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: years

text: cm

text: kg

text: No

characteristic: latitude

text: Yes

text: 10/14/16 0:00

characteristic: longitude

characteristic: miseq run

text: Female

text: 10/17/09 0:00

text: No

text: human gut metagenome

text: No

text: UCD-AMC

text: TRUE

text: White

text: Never

text: stool

text: human gut metagenome

text: female

text: Heterosexual

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.GLD019.T

characteristic: Submitter Id

text: No

text: No

text: No

text: Yes

text: Yes

text: No

text: 2015-02-18 00:00

text: 1/1/11 0:00

text: stool sample

characteristic: description

text: TRUE

characteristic: elevation

characteristic: emp status

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

characteristic: enterotype

text: Urban Biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: non-hispanic

characteristic: ethnicity

text: Male

characteristic: gender

text: USA:CO:Aurora

characteristic: geo loc name

characteristic: high risk

text: Positive

characteristic: hiv

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human

text: adult

text: Homo sapiens

text: years

text: cm

text: kg

text: No

text: MSM

text: human gut metagenome

characteristic: organism

text: UCD-AMC

text: TRUE

text: Black/African American

characteristic: race

text: stool

text: human gut metagenome

text: male

text: An exploration of Prevotella-rich microbiomes in HIV and men who have sex with men

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.GLD020.T

text: No

text: No

text: Yes

text: No

text: Yes

text: No

characteristic: bmi

text: 2015-05-12 00:00

text: 5/5/14 0:00

text: stool sample

text: TRUE

text: Host-associated

text: Animal

text: Animal distal gut

text: Bacteroides

text: Urban Biome

text: human-associated habitat

text: human-gut

text: feces

text: non-hispanic

text: Male

text: USA:CO:Aurora

text: Positive

text: UBERON:feces

characteristic: host body habitat

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

characteristic: host height

text: adult

characteristic: host life stage

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: years

text: cm

text: kg

characteristic: latitude

text: No

characteristic: longitude

characteristic: miseq run

text: MSM

text: human gut metagenome

text: UCD-AMC

text: TRUE

text: White

text: stool

text: human gut metagenome

text: male

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: qiita_sid_11914:11914.St.chronic.GLD021.T

characteristic: Submitter Id

text: No

text: No

text: No

text: No

text: Yes

text: Yes

text: 2015-03-04 00:00

text: 1/1/06 0:00

text: stool sample

characteristic: description

text: TRUE

characteristic: elevation

characteristic: emp status

text: Host-associated

text: Animal

text: Animal distal gut

text: Bacteroides

characteristic: enterotype

text: Urban Biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: non-hispanic

characteristic: ethnicity

text: Male

characteristic: gender

text: USA:CO:Aurora

characteristic: geo loc name

characteristic: high risk

text: Positive

characteristic: hiv

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human

text: adult

text: Homo sapiens

text: years

text: cm

text: kg

text: No

text: MSM

text: 1/1/06 0:00

text: human gut metagenome

characteristic: organism

text: UCD-AMC

text: TRUE

text: White

text: stool

text: human gut metagenome

text: male

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.GLD022.T

text: No

text: No

text: No

text: No

text: Yes

text: Yes

characteristic: bmi

text: 2015-03-04 00:00

text: 1/1/07 0:00

text: stool sample

text: TRUE

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

text: Urban Biome

text: human-associated habitat

text: human-gut

text: feces

text: hispanic

text: Male

text: USA:CO:Aurora

text: Positive

text: UBERON:feces

characteristic: host body habitat

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

characteristic: host height

text: adult

characteristic: host life stage

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: years

text: cm

text: kg

text: No

characteristic: latitude

text: Yes

text: 10/15/16 0:00

characteristic: longitude

characteristic: miseq run

text: MSM

text: 1/1/01 0:00

text: No

text: human gut metagenome

text: No

text: UCD-AMC

text: TRUE

text: White

text: Never

text: stool

text: human gut metagenome

text: male

text: Gay

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: qiita_sid_11914:11914.St.chronic.GLD025.T

characteristic: Submitter Id

text: No

text: No

text: Yes

text: No

text: Yes

text: No

text: 2015-03-26 00:00

text: 1/1/14 0:00

text: stool sample

characteristic: description

text: TRUE

characteristic: elevation

characteristic: emp status

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

characteristic: enterotype

text: Urban Biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: non-hispanic

characteristic: ethnicity

text: Male

characteristic: gender

text: USA:CO:Aurora

characteristic: geo loc name

characteristic: high risk

text: Positive

characteristic: hiv

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human

text: adult

text: Homo sapiens

text: years

text: cm

text: kg

text: No

text: MSM

text: human gut metagenome

characteristic: organism

text: UCD-AMC

text: TRUE

text: White

characteristic: race

text: stool

text: human gut metagenome

text: male

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.GLD026.T

text: No

text: No

text: No

text: Yes

text: Yes

text: No

characteristic: bmi

text: 2015-04-14 00:00

text: 1/1/02 0:00

text: stool sample

text: TRUE

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

text: Urban Biome

text: human-associated habitat

text: human-gut

text: feces

text: non-hispanic

text: Male

text: USA:CO:Aurora

text: Positive

text: UBERON:feces

characteristic: host body habitat

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

characteristic: host height

text: adult

characteristic: host life stage

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: years

text: cm

text: kg

text: No

characteristic: latitude

text: Yes

text: 4/19/16 0:00

characteristic: longitude

characteristic: miseq run

text: MSM

text: 1/1/02 0:00

text: No

text: human gut metagenome

text: Yes

text: UCD-AMC

text: TRUE

text: Black/African American

text: < 1 time per week

text: stool

text: human gut metagenome

text: male

text: Gay

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: qiita_sid_11914:11914.St.chronic.GLD028.U

characteristic: Submitter Id

text: No

text: No

text: No

text: No

text: No

text: No

text: 2015-05-05 00:00

text: stool sample

characteristic: description

text: TRUE

characteristic: elevation

characteristic: emp status

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

characteristic: enterotype

text: Urban Biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: non-hispanic

characteristic: ethnicity

text: Male

characteristic: gender

text: USA:CO:Aurora

characteristic: geo loc name

characteristic: high risk

text: Positive

characteristic: hiv

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human

text: adult

text: Homo sapiens

text: years

text: cm

text: kg

text: No

text: Yes

text: MSM

text: 5/5/15 0:00

text: No

text: human gut metagenome

characteristic: organism

text: No

text: UCD-AMC

text: TRUE

text: White

text: Never

text: stool

text: human gut metagenome

text: male

text: Gay

text: untreated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.GLD029.T

text: No

text: No

text: Yes

text: No

text: Yes

text: No

characteristic: bmi

text: 2015-05-05 00:00

text: 5/1/14 0:00

text: stool sample

text: TRUE

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

text: Urban Biome

text: human-associated habitat

text: human-gut

text: feces

text: non-hispanic

text: Male

text: USA:CO:Aurora

text: Positive

text: UBERON:feces

characteristic: host body habitat

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

characteristic: host height

text: adult

characteristic: host life stage

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: years

text: cm

text: kg

text: No

characteristic: latitude

text: Yes

text: 9/22/16 0:00

characteristic: longitude

characteristic: miseq run

text: MSM

text: 7/1/12 0:00

text: No

text: human gut metagenome

text: Yes

text: UCD-AMC

text: TRUE

text: White

text: < 1 time per week

text: stool

text: human gut metagenome

text: male

text: Gay

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: qiita_sid_11914:11914.St.chronic.GLD030.T

characteristic: Submitter Id

text: Yes

text: No

text: Yes

text: No

text: Yes

text: No

text: 2015-05-05 00:00

text: 10/10/14 0:00

text: stool sample

characteristic: description

text: TRUE

characteristic: elevation

characteristic: emp status

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

characteristic: enterotype

text: Urban Biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: hispanic

characteristic: ethnicity

text: Male

characteristic: gender

text: USA:CO:Aurora

characteristic: geo loc name

characteristic: high risk

text: Positive

characteristic: hiv

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human

text: adult

text: Homo sapiens

text: years

text: cm

text: kg

text: No

text: MSM

text: 7/2/09 0:00

text: human gut metagenome

characteristic: organism

text: UCD-AMC

text: TRUE

text: White

text: stool

text: human gut metagenome

text: male

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.GLD036.T

text: Yes

text: No

text: No

text: Yes

text: Yes

text: No

characteristic: bmi

text: 2015-07-08 00:00

text: 4/1/08 0:00

text: stool sample

text: TRUE

text: Host-associated

text: Animal

text: Animal distal gut

text: Bacteroides

text: Urban Biome

text: human-associated habitat

text: human-gut

text: feces

text: non-hispanic

text: Male

text: USA:CO:Aurora

text: Positive

text: UBERON:feces

characteristic: host body habitat

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

characteristic: host height

text: adult

characteristic: host life stage

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: years

text: cm

text: kg

characteristic: latitude

text: No

characteristic: longitude

characteristic: miseq run

text: MSM

text: 1/15/08 0:00

text: human gut metagenome

text: UCD-AMC

text: TRUE

text: White

text: stool

text: human gut metagenome

text: male

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: qiita_sid_11914:11914.St.chronic.GLD037.T

characteristic: Submitter Id

text: PCN

characteristic: antibiotic type

text: Yes

text: No

text: Yes

text: No

text: Yes

text: No

text: 2015-10-07 00:00

text: 1/1/12 0:00

text: stool sample

characteristic: description

text: TRUE

characteristic: elevation

characteristic: emp status

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

characteristic: enterotype

text: Urban Biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: non-hispanic

characteristic: ethnicity

text: Male

characteristic: gender

text: USA:CO:Aurora

characteristic: geo loc name

characteristic: high risk

text: Positive

characteristic: hiv

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human

text: adult

text: Homo sapiens

text: years

text: cm

text: kg

text: No

text: Yes

text: 5/12/16 0:00

text: MSM

text: Yes

text: human gut metagenome

characteristic: organism

text: Yes

text: UCD-AMC

text: TRUE

text: White

text: < 1 time per week

text: stool

text: human gut metagenome

text: male

text: Gay

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.GLD039.T

text: No

text: No

text: Yes

text: No

text: Yes

text: No

characteristic: bmi

text: 2015-09-29 00:00

text: 1/1/15 0:00

text: stool sample

text: TRUE

text: Host-associated

text: Animal

text: Animal distal gut

text: Bacteroides

text: Urban Biome

text: human-associated habitat

text: human-gut

text: feces

text: non-hispanic

text: Female

text: USA:CO:Aurora

text: Positive

text: UBERON:feces

characteristic: host body habitat

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

characteristic: host height

text: adult

characteristic: host life stage

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: years

text: cm

text: kg

text: No

characteristic: latitude

text: Yes

text: 10/29/16 0:00

characteristic: longitude

characteristic: miseq run

text: Female

text: 1/1/94 0:00

text: No

text: human gut metagenome

text: No

text: UCD-AMC

text: TRUE

text: White

text: Never

text: stool

text: human gut metagenome

text: female

text: Heterosexual

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: qiita_sid_11914:11914.St.chronic.GLD040.T

characteristic: Submitter Id

text: No

text: No

text: Yes

text: No

text: Yes

text: No

text: 2015-10-07 00:00

text: 1/1/15 0:00

text: stool sample

characteristic: description

text: TRUE

characteristic: elevation

characteristic: emp status

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

characteristic: enterotype

text: Urban Biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: non-hispanic

characteristic: ethnicity

text: Male

characteristic: gender

text: USA:CO:Aurora

characteristic: geo loc name

characteristic: high risk

text: Positive

characteristic: hiv

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human

text: adult

text: Homo sapiens

text: years

text: cm

text: kg

text: No

text: MSM

text: 1/1/14 0:00

text: human gut metagenome

characteristic: organism

text: UCD-AMC

text: TRUE

text: Black/African American

text: stool

text: human gut metagenome

text: male

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.GLD042.U

text: Yes

text: No

text: No

text: No

text: No

text: No

characteristic: bmi

text: 2015-09-24 00:00

text: stool sample

text: TRUE

text: Host-associated

text: Animal

text: Animal distal gut

text: Bacteroides

text: Urban Biome

text: human-associated habitat

text: human-gut

text: feces

text: non-hispanic

text: Male

text: USA:CO:Aurora

text: Positive

text: UBERON:feces

characteristic: host body habitat

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

characteristic: host height

text: adult

characteristic: host life stage

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: years

text: cm

text: kg

text: No

characteristic: latitude

text: Yes

text: 4/20/16 0:00

characteristic: longitude

characteristic: miseq run

text: MSM

text: 9/24/15 0:00

text: No

text: human gut metagenome

text: Yes

text: UCD-AMC

text: TRUE

text: White

text: < 1 time per week

text: stool

text: human gut metagenome

text: male

text: Gay

text: untreated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: qiita_sid_11914:11914.St.chronic.GLD043.U

characteristic: Submitter Id

text: No

text: No

text: No

text: No

text: No

text: No

text: 2015-10-13 00:00

text: stool sample

characteristic: description

text: TRUE

characteristic: elevation

characteristic: emp status

text: Host-associated

text: Animal

text: Animal distal gut

text: Bacteroides

characteristic: enterotype

text: Urban Biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: non-hispanic

characteristic: ethnicity

text: Male

characteristic: gender

text: USA:CO:Aurora

characteristic: geo loc name

characteristic: high risk

text: Positive

characteristic: hiv

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human

text: adult

text: Homo sapiens

text: years

text: cm

text: kg

text: No

text: Yes

text: 5/3/16 0:00

text: MSW

text: 1/1/06 0:00

text: No

text: human gut metagenome

characteristic: organism

text: No

text: UCD-AMC

text: TRUE

text: White

text: Never

text: stool

text: human gut metagenome

text: male

text: Heterosexual

text: untreated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.GLD044.T

text: No

text: No

text: No

text: No

text: Yes

text: Yes

characteristic: bmi

text: 2015-11-10 00:00

text: 11/1/10 0:00

text: stool sample

text: TRUE

text: Host-associated

text: Animal

text: Animal distal gut

text: Bacteroides

text: Urban Biome

text: human-associated habitat

text: human-gut

text: feces

text: hispanic

text: Female

text: USA:CO:Aurora

text: Positive

text: UBERON:feces

characteristic: host body habitat

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

characteristic: host height

text: adult

characteristic: host life stage

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: years

text: cm

text: kg

characteristic: latitude

text: No

characteristic: longitude

characteristic: miseq run

text: Female

text: human gut metagenome

text: UCD-AMC

text: TRUE

text: White

characteristic: race

text: stool

text: human gut metagenome

text: female

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.GLD048.U

characteristic: Submitter Id

text: No

text: No

text: No

text: No

text: No

text: No

text: 2015-11-03 00:00

text: stool sample

characteristic: description

text: TRUE

characteristic: elevation

characteristic: emp status

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

characteristic: enterotype

text: Urban Biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: non-hispanic

characteristic: ethnicity

text: Male

characteristic: gender

text: USA:CO:Aurora

characteristic: geo loc name

characteristic: high risk

text: Positive

characteristic: hiv

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human

text: adult

text: Homo sapiens

text: years

text: cm

text: kg

text: No

text: Yes

text: 6/14/16 0:00

text: MSM

text: 10/15/15 0:00

text: No

text: human gut metagenome

characteristic: organism

text: Yes

text: UCD-AMC

text: TRUE

text: White

text: Never

text: stool

text: human gut metagenome

text: male

text: Gay

text: untreated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: qiita_sid_11914:11914.St.chronic.GLD051.T

text: Amoxicillin

characteristic: antibiotic type

text: Yes

text: No

text: No

text: No

text: Yes

text: Yes

characteristic: bmi

text: 2015-11-10 00:00

text: 1/1/12 0:00

text: stool sample

text: TRUE

text: Host-associated

text: Animal

text: Animal distal gut

text: Bacteroides

text: Urban Biome

text: human-associated habitat

text: human-gut

text: feces

text: non-hispanic

text: Male

text: USA:CO:Aurora

text: Positive

text: UBERON:feces

characteristic: host body habitat

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

characteristic: host height

text: adult

characteristic: host life stage

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: years

text: cm

text: kg

characteristic: latitude

text: No

characteristic: longitude

characteristic: miseq run

text: MSM

text: 6/1/94 0:00

text: human gut metagenome

text: UCD-AMC

text: TRUE

text: White

text: stool

text: human gut metagenome

text: male

text: An exploration of Prevotella-rich microbiomes in HIV and men who have sex with men

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.GLD054.T

characteristic: Submitter Id

text: Bactrim

text: Yes

text: Yes

text: Yes

text: No

text: Yes

text: No

text: 2015-11-10 00:00

text: 1/1/05 0:00

text: stool sample

characteristic: description

text: TRUE

characteristic: elevation

characteristic: emp status

text: Host-associated

text: Animal

text: Animal distal gut

text: Bacteroides

characteristic: enterotype

text: Urban Biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: hispanic

characteristic: ethnicity

text: Female

characteristic: gender

text: USA:CO:Aurora

characteristic: geo loc name

characteristic: high risk

text: Positive

characteristic: hiv

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human

text: adult

text: Homo sapiens

text: years

text: cm

text: kg

text: No

text: Female

text: human gut metagenome

characteristic: organism

text: UCD-AMC

text: TRUE

text: White

text: stool

text: human gut metagenome

text: female

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: qiita_sid_11914:11914.St.chronic.GLD055.T

text: No

text: No

text: Yes

text: Yes

text: Yes

text: No

characteristic: bmi

text: 2015-12-19 00:00

text: 10/17/08 0:00

text: stool sample

text: TRUE

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

text: Urban Biome

text: human-associated habitat

text: human-gut

text: feces

text: non-hispanic

text: Male

text: USA:CO:Aurora

text: Positive

text: UBERON:feces

characteristic: host body habitat

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

characteristic: host height

text: adult

characteristic: host life stage

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: years

text: cm

text: kg

text: No

characteristic: latitude

text: Yes

text: 11/9/16 0:00

characteristic: longitude

characteristic: miseq run

text: MSM

text: 1/1/98 0:00

text: No

text: human gut metagenome

text: Yes

text: UCD-AMC

text: TRUE

text: White

text: Never

text: stool

text: human gut metagenome

text: male

text: Gay

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.GLD057.T

characteristic: Submitter Id

text: Yes

text: Yes

text: No

text: No

text: Yes

text: Yes

text: 2015-12-15 00:00

text: 1/1/14 0:00

text: stool sample

characteristic: description

text: TRUE

characteristic: elevation

characteristic: emp status

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

characteristic: enterotype

text: Urban Biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: non-hispanic

characteristic: ethnicity

text: Male

characteristic: gender

text: USA:CO:Aurora

characteristic: geo loc name

characteristic: high risk

text: Positive

characteristic: hiv

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human

text: adult

text: Homo sapiens

text: years

text: cm

text: kg

text: No

text: MSM

text: human gut metagenome

characteristic: organism

text: UCD-AMC

text: TRUE

text: White

characteristic: race

text: stool

text: human gut metagenome

text: male

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.GLD069.T

text: No

text: No

text: Yes

text: No

text: Yes

text: No

characteristic: bmi

text: 2016-01-29 00:00

text: 11/1/14 0:00

text: stool sample

text: TRUE

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

text: Urban Biome

text: human-associated habitat

text: human-gut

text: feces

text: non-hispanic

text: Male

text: USA:CO:Aurora

text: Positive

text: UBERON:feces

characteristic: host body habitat

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

characteristic: host height

text: adult

characteristic: host life stage

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: years

text: cm

text: kg

characteristic: latitude

text: No

characteristic: longitude

characteristic: miseq run

text: MSM

text: human gut metagenome

text: UCD-AMC

text: TRUE

text: Black/African American

text: stool

text: human gut metagenome

text: male

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: qiita_sid_11914:11914.St.chronic.GLD072.T

characteristic: Submitter Id

text: Yes

text: No

text: No

text: Yes

text: Yes

text: No

text: 2016-02-11 00:00

text: 2/1/12 0:00

text: stool sample

characteristic: description

text: TRUE

characteristic: elevation

characteristic: emp status

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

characteristic: enterotype

text: Urban Biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: non-hispanic

characteristic: ethnicity

text: Male

characteristic: gender

text: USA:CO:Aurora

characteristic: geo loc name

characteristic: high risk

text: Positive

characteristic: hiv

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human

text: adult

text: Homo sapiens

text: years

text: cm

text: kg

text: Yes

text: Yes

text: 10/18/16 0:00

text: MSM

text: 1/1/99 0:00

text: No

text: human gut metagenome

characteristic: organism

text: Yes

text: UCD-AMC

text: TRUE

text: White

text: < 1 time per week

text: stool

text: human gut metagenome

text: male

text: Gay

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.GLD073.U

text: pencillin

characteristic: antibiotic type

text: Yes

text: No

text: No

text: No

text: No

text: No

characteristic: bmi

text: 2016-02-11 00:00

text: stool sample

text: TRUE

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

text: Urban Biome

text: human-associated habitat

text: human-gut

text: feces

text: non-hispanic

text: Male

text: USA:CO:Aurora

text: Positive

text: UBERON:feces

characteristic: host body habitat

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

characteristic: host height

text: adult

characteristic: host life stage

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: years

text: cm

text: kg

text: No

characteristic: latitude

text: Yes

text: 9/20/15 0:00

characteristic: longitude

characteristic: miseq run

text: MSM

text: 2/11/16 0:00

text: No

text: human gut metagenome

text: Yes

text: UCD-AMC

text: TRUE

text: Black/African American

text: < 1 time per week

text: stool

text: human gut metagenome

text: male

text: Gay

text: untreated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.GLD080.T

characteristic: Submitter Id

text: No

text: 2016-02-23 00:00

text: 1/15/16 0:00

text: stool sample

characteristic: description

text: TRUE

characteristic: elevation

characteristic: emp status

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

characteristic: enterotype

text: Urban Biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: hispanic

characteristic: ethnicity

text: Male

characteristic: gender

text: USA:CO:Aurora

characteristic: geo loc name

characteristic: high risk

text: Positive

characteristic: hiv

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human

text: adult

text: Homo sapiens

text: years

text: cm

text: kg

text: No

text: Yes

text: 10/19/16 0:00

text: MSM

text: 1/1/06 0:00

text: No

text: human gut metagenome

characteristic: organism

text: Yes

text: UCD-AMC

text: TRUE

text: White

characteristic: race

text: >1 time per week

text: stool

text: human gut metagenome

text: male

text: Gay

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.GLD092.U

text: No

text: No

text: No

text: No

text: No

text: No

characteristic: bmi

text: 2016-04-28 00:00

text: stool sample

text: TRUE

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

text: Urban Biome

text: human-associated habitat

text: human-gut

text: feces

text: non-hispanic

text: Male

text: USA:CO:Aurora

text: Positive

text: UBERON:feces

characteristic: host body habitat

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

characteristic: host height

text: adult

characteristic: host life stage

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: years

text: cm

text: kg

text: No

characteristic: latitude

text: Yes

characteristic: longitude

characteristic: miseq run

text: MSM

text: 4/28/16 0:00

text: No

text: human gut metagenome

text: Yes

text: UCD-AMC

text: TRUE

text: White

text: < 1 time per week

text: stool

text: human gut metagenome

text: male

text: Gay

text: untreated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: qiita_sid_11914:11914.St.chronic.GLD104.T

characteristic: Submitter Id

text: No

text: No

text: No

text: No

text: Yes

text: No

text: 2016-04-12 00:00

text: 1/1/03 0:00

text: stool sample

characteristic: description

text: TRUE

characteristic: elevation

characteristic: emp status

text: Host-associated

text: Animal

text: Animal distal gut

text: Bacteroides

characteristic: enterotype

text: Urban Biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: non-hispanic

characteristic: ethnicity

text: Male

characteristic: gender

text: USA:CO:Aurora

characteristic: geo loc name

characteristic: high risk

text: Positive

characteristic: hiv

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human

text: adult

text: Homo sapiens

text: years

text: cm

text: kg

text: No

text: Yes

text: MSM

text: 6/15/15 0:00

text: No

text: human gut metagenome

characteristic: organism

text: No

text: UCD-AMC

text: TRUE

text: White

text: Never

text: stool

text: human gut metagenome

text: male

text: Gay

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.GLD106.T

text: No

text: Yes

text: Yes

text: Yes

text: Yes

characteristic: bmi

text: 2016-04-12 00:00

text: 1/1/11 0:00

text: stool sample

text: TRUE

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

text: Urban Biome

text: human-associated habitat

text: human-gut

text: feces

text: non-hispanic

text: Male

text: USA:CO:Aurora

text: Positive

text: UBERON:feces

characteristic: host body habitat

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

characteristic: host height

text: adult

characteristic: host life stage

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: years

text: cm

text: kg

text: No

characteristic: latitude

text: Yes

characteristic: longitude

characteristic: miseq run

text: MSM

text: 1/1/94 0:00

text: No

text: human gut metagenome

text: No

text: UCD-AMC

text: TRUE

text: White

text: >1 time per week

text: stool

text: human gut metagenome

text: male

text: Gay

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: qiita_sid_11914:11914.St.chronic.GLD112.T

characteristic: Submitter Id

text: No

text: No

text: No

text: Yes

text: Yes

text: No

text: 2016-05-10 00:00

text: 1/1/05 0:00

text: stool sample

characteristic: description

text: TRUE

characteristic: elevation

characteristic: emp status

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

characteristic: enterotype

text: Urban Biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: non-hispanic

characteristic: ethnicity

text: Male

characteristic: gender

text: USA:CO:Aurora

characteristic: geo loc name

characteristic: high risk

text: Positive

characteristic: hiv

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human

text: adult

text: Homo sapiens

text: years

text: cm

text: kg

text: No

text: Yes

text: MSM

text: No

text: human gut metagenome

characteristic: organism

text: Yes

text: UCD-AMC

text: TRUE

text: White

text: < 1 time per week

text: stool

text: human gut metagenome

text: male

text: Gay

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.GLD118.U

text: Yes

text: No

text: No

text: No

text: No

text: No

characteristic: bmi

text: 2016-05-26 00:00

text: stool sample

text: TRUE

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

text: Urban Biome

text: human-associated habitat

text: human-gut

text: feces

text: non-hispanic

text: Male

text: USA:CO:Aurora

text: Positive

text: UBERON:feces

characteristic: host body habitat

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

characteristic: host height

text: adult

characteristic: host life stage

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: years

text: cm

text: kg

text: Yes

characteristic: latitude

text: Yes

text: 4/26/16 0:00

characteristic: longitude

characteristic: miseq run

text: MSM

text: 5/26/16 0:00

text: Yes

text: human gut metagenome

text: Yes

text: UCD-AMC

text: TRUE

text: White

text: >1 time per week

text: stool

text: human gut metagenome

text: male

text: Gay

text: untreated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: qiita_sid_11914:11914.St.chronic.GLD119.T

characteristic: Submitter Id

text: No

text: No

text: Yes

text: No

text: Yes

text: Yes

text: 2016-05-27 00:00

text: 1/1/07 0:00

text: stool sample

characteristic: description

text: TRUE

characteristic: elevation

characteristic: emp status

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

characteristic: enterotype

text: Urban Biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: non-hispanic

characteristic: ethnicity

text: Male

characteristic: gender

text: USA:CO:Aurora

characteristic: geo loc name

characteristic: high risk

text: Positive

characteristic: hiv

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human

text: adult

text: Homo sapiens

text: years

text: cm

text: kg

text: No

text: Yes

text: 5/4/16 0:00

text: MSM

text: 1/1/07 0:00

text: No

text: human gut metagenome

characteristic: organism

text: Yes

text: UCD-AMC

text: TRUE

text: White

text: < 1 time per week

text: stool

text: human gut metagenome

text: male

text: Gay

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.GLD122.T

text: URI z-pack

characteristic: antibiotic type

text: Yes

text: No

text: Yes

text: Yes

text: No

text: Yes

characteristic: bmi

text: 2016-05-26 00:00

text: 3/7/11 0:00

text: stool sample

text: TRUE

text: Host-associated

text: Animal

text: Animal distal gut

text: Bacteroides

text: Urban Biome

text: human-associated habitat

text: human-gut

text: feces

text: non-hispanic

text: Female

text: USA:CO:Aurora

text: Positive

text: UBERON:feces

characteristic: host body habitat

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

characteristic: host height

text: adult

characteristic: host life stage

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: years

text: cm

text: kg

text: No

characteristic: latitude

text: Yes

text: 5/12/16 0:00

characteristic: longitude

characteristic: miseq run

text: Female

text: No

text: human gut metagenome

text: No

text: UCD-AMC

text: TRUE

text: White

text: Never

text: stool

text: human gut metagenome

text: female

text: Heterosexual

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.GLD125.U

characteristic: Submitter Id

text: Yes

text: No

text: No

text: No

text: No

text: No

text: 2016-07-20 00:00

text: stool sample

characteristic: description

text: TRUE

characteristic: elevation

characteristic: emp status

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

characteristic: enterotype

text: Urban Biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: non-hispanic

characteristic: ethnicity

text: Male

characteristic: gender

text: USA:CO:Aurora

characteristic: geo loc name

characteristic: high risk

text: Positive

characteristic: hiv

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human

text: adult

text: Homo sapiens

text: years

text: cm

text: kg

text: No

text: Yes

text: 6/10/16 0:00

text: MSM

text: 6/3/16 0:00

text: No

text: human gut metagenome

characteristic: organism

text: Yes

text: UCD-AMC

text: TRUE

text: Black/African American

text: >1 time per week

text: stool

text: human gut metagenome

text: male

text: Gay

text: untreated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: qiita_sid_11914:11914.St.chronic.GLD128.T

text: No

text: No

text: Yes

text: No

text: Yes

text: No

characteristic: bmi

text: 2016-07-14 00:00

text: 1/15/15 0:00

text: stool sample

text: TRUE

text: Host-associated

text: Animal

text: Animal distal gut

text: Bacteroides

text: Urban Biome

text: human-associated habitat

text: human-gut

text: feces

text: non-hispanic

text: Male

text: USA:CO:Aurora

text: Positive

text: UBERON:feces

characteristic: host body habitat

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

characteristic: host height

text: adult

characteristic: host life stage

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: years

text: cm

text: kg

text: No

characteristic: latitude

text: Yes

text: 6/7/16 0:00

characteristic: longitude

characteristic: miseq run

text: MSM

text: No

text: human gut metagenome

text: No

text: UCD-AMC

text: TRUE

text: White

text: Never

text: stool

text: human gut metagenome

text: male

text: Gay

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.GLD131.T

characteristic: Submitter Id

text: clindamycin; minocycline

characteristic: antibiotic type

text: Yes

text: No

text: No

text: Yes

text: Yes

text: No

text: 2016-07-21 00:00

text: 11/1/06 0:00

text: stool sample

characteristic: description

text: TRUE

characteristic: elevation

characteristic: emp status

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

characteristic: enterotype

text: Urban Biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: non-hispanic

characteristic: ethnicity

text: Male

characteristic: gender

text: USA:CO:Aurora

characteristic: geo loc name

characteristic: high risk

text: Positive

characteristic: hiv

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human

text: adult

text: Homo sapiens

text: years

text: cm

text: kg

text: No

text: Yes

text: 6/28/16 0:00

text: MSM

text: No

text: human gut metagenome

text: Yes

text: UCD-AMC

text: TRUE

text: White

text: Never

text: stool

text: human gut metagenome

text: male

text: Gay

text: An exploration of Prevotella-rich microbiomes in HIV and men who have sex with men

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: qiita_sid_11914:11914.St.chronic.GLD132.T

text: No

text: No

text: Yes

text: No

text: Yes

text: Yes

characteristic: bmi

text: 2016-09-07 00:00

text: 1/1/08 0:00

text: stool sample

text: TRUE

text: Host-associated

text: Animal

text: Animal distal gut

text: Bacteroides

text: Urban Biome

text: human-associated habitat

text: human-gut

text: feces

text: non-hispanic

text: Male

text: USA:CO:Aurora

text: Positive

text: UBERON:feces

characteristic: host body habitat

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

characteristic: host height

text: adult

characteristic: host life stage

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: years

text: cm

text: kg

text: No

characteristic: latitude

text: Yes

text: 9/13/16 0:00

characteristic: longitude

characteristic: miseq run

text: MSM

text: 1/1/90 0:00

text: No

text: human gut metagenome

characteristic: organism

text: No

text: UCD-AMC

text: TRUE

text: White

text: Never

text: stool

text: human gut metagenome

text: male

text: Bisexual

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.GLD133.T

characteristic: Submitter Id

text: No

text: No

text: Yes

text: No

text: Yes

text: No

text: 2016-09-29 00:00

text: 1/1/08 0:00

text: stool sample

characteristic: description

text: TRUE

characteristic: elevation

characteristic: emp status

text: Host-associated

text: Animal

text: Animal distal gut

text: Bacteroides

characteristic: enterotype

text: Urban Biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: non-hispanic

characteristic: ethnicity

text: Male

characteristic: gender

text: USA:CO:Aurora

characteristic: geo loc name

characteristic: high risk

text: Positive

characteristic: hiv

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human

text: adult

text: Homo sapiens

text: years

text: cm

text: kg

text: No

text: Yes

text: 9/8/16 0:00

text: MSM

text: 10/1/97 0:00

text: No

text: human gut metagenome

text: No

text: UCD-AMC

text: TRUE

text: White

text: Never

text: stool

text: human gut metagenome

text: male

text: Gay

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: qiita_sid_11914:11914.St.chronic.GLD135.T

text: No

text: No

text: No

text: Yes

text: Yes

text: No

characteristic: bmi

text: 2016-10-07 00:00

text: 1/1/10 0:00

text: stool sample

text: TRUE

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

text: Urban Biome

text: human-associated habitat

text: human-gut

text: feces

text: non-hispanic

text: FTM

text: USA:CO:Aurora

text: Positive

text: UBERON:feces

characteristic: host body habitat

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

characteristic: host height

text: adult

characteristic: host life stage

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: years

text: cm

text: kg

text: No

characteristic: latitude

text: Yes

text: 9/21/16 0:00

characteristic: longitude

characteristic: miseq run

text: MSW

text: 1/1/00 0:00

text: No

text: human gut metagenome

characteristic: organism

text: No

text: UCD-AMC

text: TRUE

text: Black/African American

text: Never

text: stool

text: human gut metagenome

text: FTM

text: Heterosexual

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.LHM004.2.T

characteristic: Submitter Id

text: No

text: No

text: No

text: No

text: Yes

text: Yes

text: 2011-03-09 00:00

text: 8/16/10 0:00

text: stool sample

characteristic: description

text: TRUE

characteristic: elevation

characteristic: emp status

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

characteristic: enterotype

text: Urban Biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: hispanic

characteristic: ethnicity

text: Male

characteristic: gender

text: USA:CO:Aurora

characteristic: geo loc name

characteristic: high risk

text: Positive

characteristic: hiv

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human

text: adult

text: Homo sapiens

text: years

text: cm

text: kg

text: No

text: MSM

text: human gut metagenome

text: UCD-AMC

text: FALSE

text: White

characteristic: race

text: stool

characteristic: sample type

text: human gut metagenome

text: male

characteristic: sex

characteristic: title

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.LHM005.2.T

characteristic: Submitter Id

text: No

text: No

text: No

text: No

text: Yes

text: Yes

characteristic: bmi

text: 2011-04-06 00:00

text: 8/18/10 0:00

text: stool sample

characteristic: description

text: TRUE

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

text: Urban Biome

text: human-associated habitat

text: human-gut

text: feces

text: non-hispanic

text: Female

text: USA:CO:Aurora

text: Positive

text: UBERON:feces

characteristic: host body habitat

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

characteristic: host height

text: adult

characteristic: host life stage

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: years

text: cm

text: kg

characteristic: latitude

text: No

characteristic: longitude

characteristic: miseq run

text: Female

text: human gut metagenome

characteristic: organism

text: UCD-AMC

text: FALSE

text: Black/African American

text: stool

text: human gut metagenome

text: female

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.LHM011.1.U

characteristic: Submitter Id

text: 9/3/10 for lymph node before study

characteristic: antibiotic type

text: Yes

text: No

text: No

text: No

text: No

text: No

characteristic: bmi

text: 2010-09-22 00:00

text: stool sample

text: TRUE

characteristic: elevation

characteristic: emp status

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

characteristic: enterotype

text: Urban Biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: non-hispanic

characteristic: ethnicity

text: Male

characteristic: gender

text: USA:CO:Aurora

characteristic: geo loc name

characteristic: high risk

text: Positive

characteristic: hiv

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human

text: adult

text: Homo sapiens

text: years

text: cm

text: kg

text: No

text: MSM

text: human gut metagenome

text: UCD-AMC

text: FALSE

text: White

characteristic: race

text: stool

characteristic: sample type

text: human gut metagenome

text: male

characteristic: sex

characteristic: title

text: untreated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.LHM017.2.T

characteristic: Submitter Id

text: No

text: No

text: Yes

text: No

text: Yes

text: No

characteristic: bmi

text: 2011-05-19 00:00

text: 12/1/10 0:00

text: stool sample

characteristic: description

text: TRUE

text: Host-associated

text: Animal

text: Animal distal gut

text: Bacteroides

text: Urban Biome

text: human-associated habitat

text: human-gut

text: feces

text: hispanic

text: Male

text: USA:CO:Aurora

text: Positive

text: UBERON:feces

characteristic: host body habitat

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

characteristic: host height

text: adult

characteristic: host life stage

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: years

text: cm

text: kg

text: No

characteristic: latitude

text: Yes

text: 9/28/16 0:00

characteristic: longitude

characteristic: miseq run

text: MSM

text: No

text: human gut metagenome

characteristic: organism

text: Yes

text: UCD-AMC

text: FALSE

text: White

text: < 1 time per week

text: stool

text: human gut metagenome

text: male

text: Gay

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.LHM021.1.T

characteristic: Submitter Id

text: No

text: No

text: No

text: No

text: Yes

text: Yes

characteristic: bmi

text: 2012-01-05 00:00

text: 12/21/10 0:00

text: stool sample

text: TRUE

characteristic: elevation

characteristic: emp status

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

characteristic: enterotype

text: Urban Biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: hispanic

characteristic: ethnicity

text: Male

characteristic: gender

text: USA:CO:Aurora

characteristic: geo loc name

characteristic: high risk

text: Positive

characteristic: hiv

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human

text: adult

text: Homo sapiens

text: years

text: cm

text: kg

text: No

text: Yes

text: 10/14/16 0:00

text: MSM

text: 12/21/10 0:00

text: No

text: human gut metagenome

text: No

text: UCD-AMC

text: FALSE

text: White

text: Never

text: stool

text: human gut metagenome

text: male

text: Gay

text: treated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: qiita_sid_11914:11914.St.chronic.LHM025.1.U

text: azithromycin 3/5-3/9/11, Ceftreoxone 3/5/11 for pneumonia

characteristic: antibiotic type

text: Yes

text: No

text: No

text: No

text: No

text: No

text: 2011-05-05 00:00

text: stool sample

characteristic: description

text: TRUE

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

text: Urban Biome

text: human-associated habitat

text: human-gut

text: feces

text: non-hispanic

text: Male

text: USA:CO:Aurora

text: Positive

text: UBERON:feces

characteristic: host body habitat

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

characteristic: host height

text: adult

characteristic: host life stage

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: years

text: cm

text: kg

characteristic: latitude

text: No

characteristic: longitude

characteristic: miseq run

text: MSM

text: human gut metagenome

characteristic: organism

text: UCD-AMC

text: FALSE

text: Black/African American

characteristic: race

text: stool

characteristic: sample type

text: human gut metagenome

text: male

characteristic: sex

characteristic: title

text: untreated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.LHM028.1.U

characteristic: Submitter Id

text: Vancomycin x1 6/14/11

characteristic: antibiotic type

text: Yes

text: No

text: No

text: No

text: No

text: No

characteristic: bmi

text: 2011-07-12 00:00

text: stool sample

characteristic: description

text: TRUE

characteristic: elevation

characteristic: emp status

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

characteristic: enterotype

text: Urban Biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: hispanic

characteristic: ethnicity

text: Male

characteristic: gender

text: USA:CO:Aurora

characteristic: geo loc name

characteristic: high risk

text: Positive

characteristic: hiv

characteristic: host age

text: UBERON:feces

characteristic: host body habitat

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

text: human

text: adult

text: Homo sapiens

text: years

text: cm

text: kg

text: No

text: MSM

text: human gut metagenome

text: UCD-AMC

text: FALSE

text: Black/African American

text: stool

text: human gut metagenome

text: male

text: untreated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_11914:11914.St.chronic.LHM030.1.U

characteristic: Submitter Id

text: No

text: No

text: No

text: No

text: No

text: No

characteristic: bmi

text: 2011-08-15 00:00

text: stool sample

text: TRUE

text: Host-associated

text: Animal

text: Animal distal gut

text: Prevotella

text: Urban Biome

text: human-associated habitat

text: human-gut

text: feces

text: hispanic

text: Male

text: USA:CO:Aurora

text: Positive

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

characteristic: host height

text: adult

characteristic: host life stage

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: years

text: cm

text: kg

characteristic: latitude

text: No

characteristic: longitude

characteristic: miseq run

text: MSM

text: human gut metagenome

characteristic: organism

text: UCD-AMC

text: FALSE

text: White

characteristic: race

text: stool

characteristic: sample type

text: human gut metagenome

text: male

text: untreated