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text: TRUE

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characteristic: env biome

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text: TB


status: PUBLIC

tag: attribute

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

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characteristic: ENA-CHECKLIST

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characteristic: ENA-FIRST-PUBLIC

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text: WinCF oxygen

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characteristic: ENA-CHECKLIST

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characteristic: ENA-FIRST-PUBLIC

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characteristic: ENA-CHECKLIST

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characteristic: ENA-FIRST-PUBLIC

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text: UCSDMI

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text: sample Blank3.10H

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characteristic: geo loc name

characteristic: host subject id

characteristic: latitude

text: metagenome

text: UCSDMI

text: FALSE

text: control blank

text: metagenome

text: WinCF oxygen


characteristic: ENA-CHECKLIST

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characteristic: longitude

text: metagenome

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text: control blank

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characteristic: ENA-FIRST-PUBLIC

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text: UCSDMI

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text: public

characteristic: SRA accession

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text: sample Blank3.12H

text: TRUE

text: urban biome

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text: UCSDMI

text: FALSE

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characteristic: sample type

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characteristic: title


text: UCSDMI

text: public

characteristic: anonymized name

text: sample Blank3.9H

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text: misc environment

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text: sterile water

text: USA:CA:San Diego

characteristic: geo loc name

text: metagenome

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text: FALSE

text: control blank

text: metagenome

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characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

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text: public

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text: sample Blank4.10H

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text: sterile water

text: USA:CA:San Diego

characteristic: host subject id

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text: control blank

text: metagenome

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characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

text: public

characteristic: SRA accession

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text: urban biome

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text: sterile water

text: USA:CA:San Diego

characteristic: longitude

text: metagenome

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text: UCSDMI

text: public

characteristic: anonymized name

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text: research facility

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text: misc environment

text: sterile water

text: USA:CA:San Diego

text: metagenome

text: UCSDMI

text: FALSE

text: control blank

characteristic: sample type

text: metagenome

characteristic: title

text: WinCF oxygen


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC last update

text: public

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characteristic: env package

text: sterile water

text: USA:CA:San Diego

characteristic: geo loc name

text: metagenome

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text: control blank

text: metagenome

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characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

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text: public

characteristic: SRA accession

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text: sample Blank5.10H

text: TRUE

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text: sterile water

text: USA:CA:San Diego

characteristic: host subject id

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text: control blank

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text: UCSDMI

text: public

characteristic: anonymized name

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text: research facility

characteristic: env feature

text: misc environment

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text: USA:CA:San Diego

characteristic: longitude

text: metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: control blank

text: metagenome

text: WinCF oxygen


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC last update

text: public

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text: TRUE

text: urban biome

text: research facility

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text: sterile water

text: USA:CA:San Diego

text: metagenome

text: UCSDMI

text: FALSE

text: control blank

characteristic: sample type

text: metagenome

characteristic: title

text: WinCF oxygen


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

text: public

characteristic: SRA accession

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text: sterile water

text: USA:CA:San Diego

characteristic: geo loc name

text: metagenome

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text: UCSDMI

text: public

characteristic: anonymized name

text: sample Blank6.10H

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text: TRUE

characteristic: elevation

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text: research facility

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text: misc environment

text: sterile water

text: USA:CA:San Diego

characteristic: host subject id

characteristic: latitude

text: metagenome

text: UCSDMI

text: FALSE

text: control blank

text: metagenome

text: WinCF oxygen


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC last update

text: public

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text: TRUE

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text: research facility

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text: sterile water

text: USA:CA:San Diego

characteristic: longitude

text: metagenome

characteristic: organism

text: UCSDMI

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text: control blank

text: metagenome

text: WinCF oxygen


characteristic: ENA-FIRST-PUBLIC

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text: UCSDMI

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: sample Blank6.12H

text: TRUE

text: urban biome

text: research facility

text: misc environment

text: sterile water

text: USA:CA:San Diego

text: metagenome

text: UCSDMI

text: FALSE

text: control blank

characteristic: sample type

text: metagenome

characteristic: title

text: WinCF oxygen


text: UCSDMI

text: public

characteristic: anonymized name

text: sample Blank6.9H

characteristic: description

text: TRUE

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text: research facility

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text: misc environment

characteristic: env package

text: sterile water

text: USA:CA:San Diego

characteristic: geo loc name

text: metagenome

text: UCSDMI

text: FALSE

text: control blank

text: metagenome

text: WinCF oxygen


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

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text: research facility

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text: sterile water

text: USA:CA:San Diego

characteristic: host subject id

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text: metagenome

text: UCSDMI

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text: control blank

text: metagenome

text: WinCF oxygen


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

text: public

characteristic: SRA accession

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text: sample Blank7.10H

text: TRUE

text: urban biome

text: research facility

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text: USA:CA:San Diego

characteristic: longitude

text: metagenome

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text: FALSE

text: control blank

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text: UCSDMI

text: public

characteristic: anonymized name

text: sample Blank7.11G

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text: research facility

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text: sterile water

text: USA:CA:San Diego

text: metagenome

text: UCSDMI

text: FALSE

text: control blank

characteristic: sample type

text: metagenome

characteristic: title

text: WinCF oxygen


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

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text: public

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text: USA:CA:San Diego

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text: control blank

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characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

text: public

characteristic: SRA accession

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text: sample Blank7.12G

text: TRUE

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text: sterile water

text: USA:CA:San Diego

characteristic: host subject id

characteristic: latitude

text: metagenome

text: UCSDMI

text: FALSE

text: control blank

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text: UCSDMI

text: public

characteristic: anonymized name

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text: research facility

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text: misc environment

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text: USA:CA:San Diego

characteristic: longitude

text: metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: control blank

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text: WinCF oxygen


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

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text: public

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text: sample Blank7.1H

text: TRUE

text: urban biome

text: research facility

text: misc environment

text: sterile water

text: USA:CA:San Diego

text: metagenome

text: UCSDMI

text: FALSE

text: control blank

characteristic: sample type

text: metagenome

characteristic: title

text: WinCF oxygen


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

text: public

characteristic: SRA accession

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text: sample Blank7.2H

text: TRUE

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characteristic: env package

text: sterile water

text: USA:CA:San Diego

characteristic: geo loc name

text: metagenome

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text: FALSE

text: control blank

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text: UCSDMI

text: public

characteristic: anonymized name

text: sample Blank7.3H

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text: research facility

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text: misc environment

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text: USA:CA:San Diego

characteristic: host subject id

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text: metagenome

text: UCSDMI

text: FALSE

text: control blank

text: metagenome

text: WinCF oxygen


characteristic: ENA-CHECKLIST

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text: UCSDMI

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text: public

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text: sterile water

text: USA:CA:San Diego

characteristic: longitude

text: metagenome

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text: UCSDMI

text: FALSE

text: control blank

text: metagenome

text: WinCF oxygen


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: sample Blank7.5H

text: TRUE

text: urban biome

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text: misc environment

text: sterile water

text: USA:CA:San Diego

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text: UCSDMI

text: FALSE

text: control blank

characteristic: sample type

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characteristic: title


text: UCSDMI

text: public

characteristic: anonymized name

text: sample Blank7.6H

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text: research facility

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text: misc environment

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text: sterile water

text: USA:CA:San Diego

characteristic: geo loc name

text: metagenome

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text: FALSE

text: control blank

text: metagenome

text: WinCF oxygen


characteristic: ENA-CHECKLIST

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characteristic: INSDC center name

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text: public

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text: TRUE

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text: research facility

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text: USA:CA:San Diego

characteristic: host subject id

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text: control blank

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characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: sample Blank7.9G

text: TRUE

text: urban biome

text: research facility

text: misc environment

text: sterile water

text: USA:CA:San Diego

characteristic: longitude

text: metagenome

characteristic: organism

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text: FALSE

text: control blank

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text: UCSDMI

text: public

characteristic: anonymized name

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characteristic: env biome

text: research facility

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text: misc environment

text: sterile water

text: USA:CA:San Diego

text: metagenome

text: UCSDMI

text: FALSE

text: control blank

characteristic: sample type

text: metagenome

characteristic: title

text: WinCF oxygen


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

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text: public

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text: sample 21

text: TRUE

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text: research facility

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characteristic: env package

text: biofilm

text: USA:CA:San Diego

characteristic: geo loc name

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text: Dorrestein UCSDMI

text: TRUE

text: biofilm

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text: WinCF oxygen

text: BC

characteristic: treatment


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

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characteristic: SRA accession

characteristic: Submitter Id

text: sample 30

text: TRUE

text: urban biome

text: research facility

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text: biofilm

text: USA:CA:San Diego

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: biofilm metagenome

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

text: biofilm metagenome

text: WinCF oxygen

text: BC


text: UCSDMI

text: public

characteristic: anonymized name

text: sample 22

characteristic: description

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characteristic: elevation

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characteristic: env biome

text: research facility

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text: microbial mat/biofilm

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text: USA:CA:San Diego

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characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

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text: biofilm metagenome

text: WinCF oxygen

characteristic: title

text: BC


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

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text: sample 23

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text: research facility

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characteristic: env package

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text: USA:CA:San Diego

characteristic: geo loc name

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text: TRUE

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text: WinCF oxygen

text: BC

characteristic: treatment


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

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characteristic: SRA accession

characteristic: Submitter Id

text: sample 24

text: TRUE

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text: research facility

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text: biofilm

text: USA:CA:San Diego

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: biofilm metagenome

text: Dorrestein UCSDMI

text: TRUE

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text: WinCF oxygen

text: BC


text: UCSDMI

text: public

characteristic: anonymized name

text: sample 25

characteristic: description

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characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: microbial mat/biofilm

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text: USA:CA:San Diego

text: biofilm metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

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characteristic: sample type

text: biofilm metagenome

characteristic: title

text: WinCF oxygen

text: BC


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCSDMI

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characteristic: INSDC last update

text: public

characteristic: INSDC status

text: sample 26

text: TRUE

text: urban biome

text: research facility

text: microbial mat/biofilm

characteristic: env package

text: biofilm

text: USA:CA:San Diego

characteristic: geo loc name

text: biofilm metagenome

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

text: biofilm metagenome

text: WinCF oxygen

text: BC

characteristic: treatment


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: sample 27

text: TRUE

text: urban biome

text: research facility

text: microbial mat/biofilm

text: biofilm

text: USA:CA:San Diego

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: biofilm metagenome

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

text: biofilm metagenome

text: WinCF oxygen

text: BC


text: UCSDMI

text: public

characteristic: anonymized name

text: sample 28

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: microbial mat/biofilm

text: biofilm

text: USA:CA:San Diego

text: biofilm metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

characteristic: sample type

text: biofilm metagenome

characteristic: title

text: WinCF oxygen

text: BC


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: sample 29

text: TRUE

text: urban biome

text: research facility

text: microbial mat/biofilm

characteristic: env package

text: biofilm

text: USA:CA:San Diego

characteristic: geo loc name

text: biofilm metagenome

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

text: biofilm metagenome

text: WinCF oxygen

text: BC

characteristic: treatment


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: sample 11

text: TRUE

text: urban biome

text: research facility

text: microbial mat/biofilm

text: biofilm

text: USA:CA:San Diego

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: biofilm metagenome

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

text: biofilm metagenome

text: WinCF oxygen

text: TB


text: UCSDMI

text: public

characteristic: anonymized name

text: sample 20

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: microbial mat/biofilm

text: biofilm

text: USA:CA:San Diego

text: biofilm metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

characteristic: sample type

text: biofilm metagenome

characteristic: title

text: WinCF oxygen

text: TB


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: sample 12

text: TRUE

text: urban biome

text: research facility

text: microbial mat/biofilm

characteristic: env package

text: biofilm

text: USA:CA:San Diego

characteristic: geo loc name

text: biofilm metagenome

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

text: biofilm metagenome

text: WinCF oxygen

text: TB

characteristic: treatment


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: sample 13

text: TRUE

text: urban biome

text: research facility

text: microbial mat/biofilm

text: biofilm

text: USA:CA:San Diego

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: biofilm metagenome

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

text: biofilm metagenome

text: WinCF oxygen

text: TB


text: UCSDMI

text: public

characteristic: anonymized name

text: sample 14

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: microbial mat/biofilm

text: biofilm

text: USA:CA:San Diego

text: biofilm metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

characteristic: sample type

text: biofilm metagenome

characteristic: title

text: WinCF oxygen

text: TB


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: sample 15

text: TRUE

text: urban biome

text: research facility

text: microbial mat/biofilm

characteristic: env package

text: biofilm

text: USA:CA:San Diego

characteristic: geo loc name

text: biofilm metagenome

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

text: biofilm metagenome

text: WinCF oxygen

text: TB

characteristic: treatment


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: sample 16

text: TRUE

text: urban biome

text: research facility

text: microbial mat/biofilm

text: biofilm

text: USA:CA:San Diego

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: biofilm metagenome

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

text: biofilm metagenome

text: WinCF oxygen

text: TB


text: UCSDMI

text: public

characteristic: anonymized name

text: sample 17

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: microbial mat/biofilm

text: biofilm

text: USA:CA:San Diego

text: biofilm metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

characteristic: sample type

text: biofilm metagenome

characteristic: title

text: WinCF oxygen

text: TB


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: sample 18

text: TRUE

text: urban biome

text: research facility

text: microbial mat/biofilm

characteristic: env package

text: biofilm

text: USA:CA:San Diego

characteristic: geo loc name

text: biofilm metagenome

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

text: biofilm metagenome

text: WinCF oxygen

text: TB

characteristic: treatment


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: sample 19

text: TRUE

text: urban biome

text: research facility

text: microbial mat/biofilm

text: biofilm

text: USA:CA:San Diego

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: biofilm metagenome

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

text: biofilm metagenome

text: WinCF oxygen

text: TB


text: UCSDMI

text: public

characteristic: anonymized name

text: sample 1

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: microbial mat/biofilm

text: biofilm

text: USA:CA:San Diego

text: biofilm metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

characteristic: sample type

text: biofilm metagenome

characteristic: title

text: WinCF oxygen

text: NT


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: sample 10

text: TRUE

text: urban biome

text: research facility

text: microbial mat/biofilm

characteristic: env package

text: biofilm

text: USA:CA:San Diego

characteristic: geo loc name

text: biofilm metagenome

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

text: biofilm metagenome

text: WinCF oxygen

text: NT

characteristic: treatment


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: sample 2

text: TRUE

text: urban biome

text: research facility

text: microbial mat/biofilm

text: biofilm

text: USA:CA:San Diego

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: biofilm metagenome

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

text: biofilm metagenome

text: WinCF oxygen

text: NT


text: UCSDMI

text: public

characteristic: anonymized name

text: sample 3

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: microbial mat/biofilm

text: biofilm

text: USA:CA:San Diego

text: biofilm metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

characteristic: sample type

text: biofilm metagenome

text: WinCF oxygen

characteristic: title

text: NT


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: sample 4

text: TRUE

text: urban biome

text: research facility

text: microbial mat/biofilm

characteristic: env package

text: biofilm

text: USA:CA:San Diego

characteristic: geo loc name

text: biofilm metagenome

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

text: biofilm metagenome

text: WinCF oxygen

text: NT

characteristic: treatment


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: sample 5

text: TRUE

text: urban biome

text: research facility

text: microbial mat/biofilm

text: biofilm

text: USA:CA:San Diego

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: biofilm metagenome

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

text: biofilm metagenome

text: WinCF oxygen

text: NT


text: UCSDMI

text: public

characteristic: anonymized name

text: sample 6

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: microbial mat/biofilm

text: biofilm

text: USA:CA:San Diego

text: biofilm metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

characteristic: sample type

text: biofilm metagenome

text: WinCF oxygen

characteristic: title

text: NT


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: sample 7

text: TRUE

text: urban biome

text: research facility

text: microbial mat/biofilm

characteristic: env package

text: biofilm

text: USA:CA:San Diego

characteristic: geo loc name

text: biofilm metagenome

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

text: biofilm metagenome

text: WinCF oxygen

text: NT

characteristic: treatment


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: sample 8

text: TRUE

text: urban biome

text: research facility

text: microbial mat/biofilm

text: biofilm

text: USA:CA:San Diego

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: biofilm metagenome

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

text: biofilm metagenome

text: WinCF oxygen

text: NT


text: UCSDMI

text: public

characteristic: anonymized name

text: sample 9

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: microbial mat/biofilm

text: biofilm

text: USA:CA:San Diego

text: biofilm metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

characteristic: sample type

text: biofilm metagenome

characteristic: title

text: WinCF oxygen

text: NT


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: sample 91

text: TRUE

text: urban biome

text: research facility

text: microbial mat/biofilm

characteristic: env package

text: biofilm

text: USA:CA:San Diego

characteristic: geo loc name

text: biofilm metagenome

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

text: biofilm metagenome

text: WinCF oxygen

text: pbs

characteristic: treatment


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: sample 92

text: TRUE

text: urban biome

text: research facility

text: microbial mat/biofilm

text: biofilm

text: USA:CA:San Diego

text: PBS

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: biofilm metagenome

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

text: biofilm metagenome

text: WinCF oxygen

text: pbs


text: UCSDMI

text: public

characteristic: anonymized name

text: sample 183

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: misc environment

text: sterile water

text: USA:CA:San Diego

text: metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: pbs control

characteristic: sample type

text: metagenome

characteristic: title

text: WinCF oxygen

text: pbs


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: sample 184

text: TRUE

text: urban biome

text: research facility

text: misc environment

characteristic: env package

text: sterile water

text: USA:CA:San Diego

characteristic: geo loc name

text: metagenome

text: Dorrestein UCSDMI

text: TRUE

text: pbs control

text: metagenome

text: WinCF oxygen

text: pbs

characteristic: treatment


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: sample 184

text: TRUE

text: urban biome

text: research facility

text: misc environment

text: sterile water

text: USA:CA:San Diego

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: metagenome

text: Dorrestein UCSDMI

text: TRUE

text: pbs control

text: metagenome

text: WinCF oxygen

text: pbs


text: UCSDMI

text: public

characteristic: anonymized name

text: sample 275

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: microbial mat/biofilm

text: biofilm

text: USA:CA:San Diego

text: PBS

text: biofilm metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

characteristic: sample type

text: biofilm metagenome

text: WinCF oxygen

characteristic: title

text: pbs


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: sample 276

text: TRUE

text: urban biome

text: research facility

text: microbial mat/biofilm

characteristic: env package

text: biofilm

text: USA:CA:San Diego

characteristic: geo loc name

text: PBS

text: biofilm metagenome

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

text: biofilm metagenome

text: WinCF oxygen

text: pbs

characteristic: treatment


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: sample 367

text: TRUE

text: urban biome

text: research facility

text: misc environment

text: sterile water

text: USA:CA:San Diego

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: metagenome

text: UCSDMI

text: FALSE

text: control blank

text: metagenome

text: WinCF oxygen


text: UCSDMI

text: public

characteristic: anonymized name

text: sample 616

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: microbial mat/biofilm

text: biofilm

text: USA:CA:San Diego

text: biofilm metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

characteristic: sample type

text: biofilm metagenome

characteristic: title

text: WinCF oxygen

text: Spu


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: sample 617

text: TRUE

text: urban biome

text: research facility

text: microbial mat/biofilm

characteristic: env package

text: biofilm

text: USA:CA:San Diego

characteristic: geo loc name

text: biofilm metagenome

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

text: biofilm metagenome

text: WinCF oxygen

text: Spu

characteristic: treatment


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: sample 618

text: TRUE

text: urban biome

text: research facility

text: microbial mat/biofilm

text: biofilm

text: USA:CA:San Diego

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: biofilm metagenome

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

text: biofilm metagenome

text: WinCF oxygen

text: Spu


text: UCSDMI

text: public

characteristic: anonymized name

text: sample 619

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: microbial mat/biofilm

text: biofilm

text: USA:CA:San Diego

text: biofilm metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

characteristic: sample type

text: biofilm metagenome

text: WinCF oxygen

characteristic: title

text: Spu


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: sample 620

text: TRUE

text: urban biome

text: research facility

text: microbial mat/biofilm

characteristic: env package

text: biofilm

text: USA:CA:San Diego

characteristic: geo loc name

text: biofilm metagenome

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

text: biofilm metagenome

text: WinCF oxygen

text: Spu

characteristic: treatment


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: sample 621

text: TRUE

text: urban biome

text: research facility

text: microbial mat/biofilm

text: biofilm

text: USA:CA:San Diego

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: biofilm metagenome

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

text: biofilm metagenome

text: WinCF oxygen

text: Spu


text: UCSDMI

text: public

characteristic: anonymized name

text: sample 622

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: microbial mat/biofilm

text: biofilm

text: USA:CA:San Diego

text: biofilm metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

characteristic: sample type

text: biofilm metagenome

text: WinCF oxygen

characteristic: title

text: Spu


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: sample 623

text: TRUE

text: urban biome

text: research facility

text: microbial mat/biofilm

characteristic: env package

text: biofilm

text: USA:CA:San Diego

characteristic: geo loc name

text: biofilm metagenome

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

text: biofilm metagenome

text: WinCF oxygen

text: Spu

characteristic: treatment


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: sample 624

text: TRUE

text: urban biome

text: research facility

text: microbial mat/biofilm

text: biofilm

text: USA:CA:San Diego

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: biofilm metagenome

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

text: biofilm metagenome

text: WinCF oxygen

text: Spu


text: UCSDMI

text: public

characteristic: anonymized name

text: sample 625

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: microbial mat/biofilm

text: biofilm

text: USA:CA:San Diego

text: biofilm metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

characteristic: sample type

text: biofilm metagenome

characteristic: title

text: WinCF oxygen

text: Spu


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: sample 626

text: TRUE

text: urban biome

text: research facility

text: microbial mat/biofilm

characteristic: env package

text: biofilm

text: USA:CA:San Diego

characteristic: geo loc name

text: biofilm metagenome

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

text: biofilm metagenome

text: WinCF oxygen

text: Spu

characteristic: treatment


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: sample 627

text: TRUE

text: urban biome

text: research facility

text: microbial mat/biofilm

text: biofilm

text: USA:CA:San Diego

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: biofilm metagenome

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

text: biofilm metagenome

text: WinCF oxygen

text: Spu


text: UCSDMI

text: public

characteristic: anonymized name

text: sample 613

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: microbial mat/biofilm

text: biofilm

text: USA:CA:San Diego

text: biofilm metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

characteristic: sample type

text: biofilm metagenome

characteristic: title

text: WinCF oxygen

text: Spu


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: sample 628

text: TRUE

text: urban biome

text: research facility

text: microbial mat/biofilm

characteristic: env package

text: biofilm

text: USA:CA:San Diego

characteristic: geo loc name

text: biofilm metagenome

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

text: biofilm metagenome

text: WinCF oxygen

text: Spu

characteristic: treatment


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: sample 629

text: TRUE

text: urban biome

text: research facility

text: microbial mat/biofilm

text: biofilm

text: USA:CA:San Diego

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: biofilm metagenome

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

text: biofilm metagenome

text: WinCF oxygen

text: Spu


text: UCSDMI

text: public

characteristic: anonymized name

text: sample 630

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: microbial mat/biofilm

text: biofilm

text: USA:CA:San Diego

text: biofilm metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

characteristic: sample type

text: biofilm metagenome

text: WinCF oxygen

characteristic: title

text: Spu


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: sample 631

text: TRUE

text: urban biome

text: research facility

text: microbial mat/biofilm

characteristic: env package

text: biofilm

text: USA:CA:San Diego

characteristic: geo loc name

text: biofilm metagenome

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

text: biofilm metagenome

text: WinCF oxygen

text: Spu

characteristic: treatment


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: sample 614

text: TRUE

text: urban biome

text: research facility

text: microbial mat/biofilm

text: biofilm

text: USA:CA:San Diego

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: biofilm metagenome

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

text: biofilm metagenome

text: WinCF oxygen

text: Spu


text: UCSDMI

text: public

characteristic: anonymized name

text: sample 615

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: microbial mat/biofilm

text: biofilm

text: USA:CA:San Diego

text: biofilm metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: biofilm

characteristic: sample type

text: biofilm metagenome

characteristic: title

text: WinCF oxygen

text: Spu


E-MTAB-6968:Sample 1

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Cancer Research UK Cambridge Institute

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-6968:Sample 1

tag: Namespace:Cancer Research UK Cambridge Institute

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: Protocols: Mouse embryonic stem cells with inactivated Tal1 were expanded under 2i+LIF conditions and stably transfected with a constitutively expressed H2B-tdTomato construct under the control of a CAG promoter. They were then injected into C57BL/6 E3.5 blastocysts, and the resulting chimeric embryos were subsequently transferred into recipient females at 2.5 days of pseudopregnancy following mating with vasectomised males. Chimeric embryos were harvested at E7.5 and E8.5 of development, dissected, and single-cell suspensions were generated from pools of embryos. 7 embryos were harvested at E7.5, and 11 embryos at E8.5. Single-cell suspensions were prepared by incubating the embryos with TrypLE Express dissociation reagent (Life Technologies) at 37 °C for 7 min and quenching with heat inactivated serum. Single-cell suspensions were sorted into tdTomato+ and tdTomato- samples using a BD Influx sorter with DAPI at 1µg/ml (Sigma) as a viability stain for subsequent 10X scRNA-seq library preparation. Steps were performed according to manufacturers' instructions (10X Genomics, v2 chemistry) Steps were performed according to manufacturers' instructions (10X Genomics, v2 chemistry). Specific produce numbers were: Chromium Single Cell 3' Library kit v2 P/N-120234; Chromium Single Cell 3' Gel Bead kit v2 P/N-120235; Chromium Single Cell 3' Chip kit v2 P/N-120236; Chromium i7 Multiplex kit v2 P/N-120262.

text: embryonic day 7.5

characteristic: developmental stage

text: Tal1 -/-; CAG-H2B-tdTomato

characteristic: genotype

text: embryo pool 1

characteristic: individual

text: Mus musculus

text: Mus musculus

text: whole organism

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: strain

text: Sample 1


E-MTAB-6968:Sample 2

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Cancer Research UK Cambridge Institute

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: E-MTAB-6968:Sample 2

characteristic: Submitter Id

text: ArrayExpress

text: house mouse

characteristic: description

text: embryonic day 7.5

text: wild type genotype

text: embryo pool 1

text: Mus musculus

text: Mus musculus

text: whole organism

text: Mus musculus

text: mixed

text: Sample 2


E-MTAB-6968:Sample 3

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Cancer Research UK Cambridge Institute

characteristic: INSDC center name

text: public

text: E-MTAB-6968:Sample 3

text: ArrayExpress

text: house mouse

text: embryonic day 8.5

text: Tal1 -/-; CAG-H2B-tdTomato

text: embryo pool 2

text: Mus musculus

characteristic: organism

text: Mus musculus

text: whole organism

text: Mus musculus

text: male

text: Sample 3

characteristic: title


E-MTAB-6968:Sample 4

text: Cancer Research UK Cambridge Institute

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-6968:Sample 4

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: embryonic day 8.5

characteristic: developmental stage

text: wild type genotype

text: embryo pool 2

text: Mus musculus

text: Mus musculus

text: whole organism

text: Mus musculus

text: mixed

text: Sample 4


text: Universidade Federal da Grande Dourados

text: public

text: BRA

tag: Namespace:Universidade Federal da Grande Dourados

characteristic: collection date

text: Klebsiella

characteristic: genus

text: Brazil

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: host

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

characteristic: isolate

text: blood

characteristic: isolation source

text: blood

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

type: AMR curated data - CABBAGE

value: polymyxin B

value: broth dilution

value: mg/L

value: Klebsiella pneumoniae


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Universidade Federal da Grande Dourados

characteristic: INSDC first public

text: public

text: BRA

characteristic: SRA accession

characteristic: Submitter Id

text: Klebsiella

text: Brazil

text: Homo sapiens

text: diseased

text: Homo sapiens

text: tracheal aspirates

text: respiratory tract

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: Universidade Federal da Grande Dourados

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: BRA

text: Klebsiella

text: Brazil

text: Homo sapiens

text: diseased

text: Homo sapiens

text: rectal swab

text: gastrointestinal system

text: Klebsiella pneumoniae

characteristic: organism

text: Klebsiella pneumoniae

characteristic: title


text: Universidade Federal da Grande Dourados

text: public

text: BRA

characteristic: collection date

text: Klebsiella

characteristic: genus

text: Brazil

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: host

text: diseased

text: Homo sapiens

text: surgical wond

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: Universidade Federal da Grande Dourados

text: public

text: BRA

text: Klebsiella

text: Brazil

text: other (non-clinical isolate)

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

characteristic: isolate

text: catheter

characteristic: isolation source

text: medical devices

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Universidade Federal da Grande Dourados

text: public

text: BRA

text: Klebsiella

text: Brazil

text: Homo sapiens

text: diseased

text: Homo sapiens

text: cerebrospinal fluid

text: central nervous system

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: Universidade Federal da Grande Dourados

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: BRA

characteristic: SRA accession

characteristic: Submitter Id

text: Klebsiella

text: Brazil

text: Homo sapiens

text: diseased

text: Homo sapiens

text: blood

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: ED

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: dorsal telencephalon

characteristic: cell type

text: house mouse

characteristic: common name

text: untreated chromatin from dorsal telencephalon

characteristic: description

characteristic: dev stage

text: Mus musculus

characteristic: organism

text: Mus musculus

text: dorsal telencephalon

characteristic: tissue type

text: Input

characteristic: title


characteristic: ENA-CHECKLIST

text: ED

text: public

text: dorsal telencephalon

text: house mouse

text: chromatin derived from dorsal telencephalon and precipitated with anti Flag antibody

text: Mus musculus

text: Mus musculus

text: dorsal telencephalon

text: Gli3 ChIP1


characteristic: ENA-FIRST-PUBLIC

text: ED

text: public

text: dorsal telencephalon

text: house mouse

text: Mus musculus

text: Mus musculus

text: dorsal telencephalon

text: Gli3 ChIP2


text: Plasmodium vivax

characteristic: ArrayExpress-SPECIES

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: malaria parasite P. vivax

text: Plasmodium vivax

text: Plasmodium vivax

characteristic: subject id


characteristic: External Id

text: INHA UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:INHA UNIVERSITY

characteristic: collection date

text: This sample (SY_1404_1M) was collected near the Soyang dam at depth 1m in April.

text: fresh water ENVO:00002011

characteristic: environment (biome)

text: lake ENVO:00000020

characteristic: environment (feature)

text: water ENVO:00002006

characteristic: environment (material)

text: South Korea

characteristic: geographic location (country and/or sea)

unit: m

characteristic: geographic location (depth)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: metagenome

characteristic: ph

text: Shotgun Metagenome Sequencing of Lake Soyang

characteristic: project name

text: metagenome

text: Illumina

characteristic: sequencing method

unit: ºC

characteristic: temperature

text: Lakewater of Lake Soyang at 1m in April

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INHA UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: This sample (SY_1404_1M) was collected near the Soyang dam at depth 50m in April.

characteristic: description

text: fresh water ENVO:00002011

text: lake ENVO:00000020

text: water ENVO:00002006

text: South Korea

text: metagenome

text: metagenome

characteristic: organism

text: metagenome

text: Illumina

text: Lakewater of Lake Soyang at 50m in April

characteristic: title

text: water


text: INHA UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: collection date

text: This sample (SY_1404_1M) was collected near the Soyang dam at depth 1m in July.

text: fresh water ENVO:00002011

characteristic: environment (biome)

text: lake ENVO:00000020

characteristic: environment (feature)

text: water ENVO:00002006

characteristic: environment (material)

text: South Korea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: metagenome

text: metagenome

text: Illumina

text: Lakewater of Lake Soyang at 1m in July

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INHA UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: This sample (SY_1404_1M) was collected near the Soyang dam at depth 50m in July.

text: fresh water ENVO:00002011

text: lake ENVO:00000020

text: water ENVO:00002006

text: South Korea

text: metagenome

text: metagenome

characteristic: ph

characteristic: project name

text: metagenome

text: Illumina

characteristic: sequencing method

characteristic: temperature

text: Lakewater of Lake Soyang at 50m in July

text: water

characteristic: water environmental package


text: INHA UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: This sample (SY_1404_1M) was collected near the Soyang dam at depth 1m in October.

characteristic: description

text: fresh water ENVO:00002011

characteristic: environment (biome)

text: lake ENVO:00000020

characteristic: environment (feature)

text: water ENVO:00002006

characteristic: environment (material)

text: South Korea

text: metagenome

text: metagenome

characteristic: organism

text: metagenome

text: Illumina

text: Lakewater of Lake Soyang at 1m in October

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INHA UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: This sample (SY_1404_1M) was collected near the Soyang dam at depth 50m in October.

text: fresh water ENVO:00002011

text: lake ENVO:00000020

text: water ENVO:00002006

text: South Korea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: metagenome

text: metagenome

text: Illumina

text: Lakewater of Lake Soyang at 50m in October

text: water


text: INHA UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: This sample (SY_1404_1M) was collected near the Soyang dam at depth 1m in January.

characteristic: description

text: fresh water ENVO:00002011

text: lake ENVO:00000020

text: water ENVO:00002006

text: South Korea

text: metagenome

text: metagenome

characteristic: ph

characteristic: project name

text: metagenome

text: Illumina

characteristic: sequencing method

characteristic: temperature

text: Lakewater of Lake Soyang 1m in January

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INHA UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: This sample (SY_1404_1M) was collected near the Soyang dam at depth 50m in January.

text: fresh water ENVO:00002011

characteristic: environment (biome)

text: lake ENVO:00000020

characteristic: environment (feature)

text: water ENVO:00002006

characteristic: environment (material)

text: South Korea

text: metagenome

text: metagenome

characteristic: organism

text: metagenome

text: Illumina

text: Lakewater of Lake Soyang at 50m in January

characteristic: title

text: water


text: Harper Adams University

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

tag: Namespace:Harper Adams University

characteristic: Submitter Id

text: Adults/Juveniles

characteristic: dev stage

text: Nematoda environmental sample

text: Nematoda environmental sample

text: First replicate of the NFI-18Sr2b marker


text: Harper Adams University

text: public

text: Adults/Juveniles

text: Nematoda environmental sample

text: Nematoda environmental sample

text: Blank sample of the NFI-18Sr2b marker


text: Harper Adams University

text: public

text: Adults/Juveniles

text: Nematoda environmental sample

text: Nematoda environmental sample

text: First replicate of the SSUF04/SSUR22 marker


text: Harper Adams University

text: public

text: Adults/Juveniles

text: Nematoda environmental sample

text: Nematoda environmental sample

text: Second replicate of the SSUF04/SSUR22 marker


text: Harper Adams University

text: public

text: Adults/Juveniles

text: Nematoda environmental sample

text: Nematoda environmental sample

text: Third replicate of SSUF04/SSUR22 marker


text: Harper Adams University

text: public

text: Adults/Juveniles

text: Nematoda environmental sample

text: Nematoda environmental sample

text: Blank sample of the SSUF04/SSUR22 marker


text: Harper Adams University

text: public

text: Adults/Juveniles

text: Nematoda environmental sample

text: Nematoda environmental sample

text: First replicate of the D3Af/D3Br marker


text: Harper Adams University

text: public

text: Adults/Juveniles

text: Nematoda environmental sample

text: Nematoda environmental sample

text: Second replicate of the D3Af/D3Br marker


text: Harper Adams University

text: public

text: Adults/Juveniles

text: Nematoda environmental sample

text: Nematoda environmental sample

text: Third replicate of the D3Af/D3Br marker


Blank

text: Harper Adams University

text: public

text: Blank

text: Adults/Juveniles

text: Nematoda environmental sample

text: Nematoda environmental sample

text: Blank sample of the D3Af/D3Br marker


text: Harper Adams University

text: public

text: Adults/Juveniles

text: Nematoda environmental sample

text: Nematoda environmental sample

text: First replicate of the JB3/JB5 marker


text: Harper Adams University

text: public

text: Adults/Juveniles

text: Nematoda environmental sample

text: Nematoda environmental sample

text: Second replicate of the JB3/JB5 marker


text: Harper Adams University

text: public

text: Adults/Juveniles

text: Nematoda environmental sample

text: Nematoda environmental sample

text: Third replicate of the JB3/JB5 marker


text: Harper Adams University

text: public

text: Adults/Juveniles

text: Nematoda environmental sample

text: Nematoda environmental sample

text: Blank sample of the JB3/JB5 marker


text: public

tag: Namespace:CHINA AGRICULTURAL UNIVERSITY, College of Animal Science and Technology

text: chicken

characteristic: common name

text: Baier Yellow Chicken

characteristic: description

text: Jiangxi Province, China

characteristic: geographic location (region and locality)

text: Gallus gallus

text: Gallus gallus


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CHINA AGRICULTURAL UNIVERSITY, College of Animal Science and Technology

text: public

text: chicken

text: Baier Yellow Chicken

text: Jiangxi Province, China

text: Gallus gallus

text: Gallus gallus


characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: chicken

text: Beijing You Chicken

text: Beijing, China

text: Gallus gallus

text: Gallus gallus


text: public

text: chicken

text: Langshan Chicken

text: Jiangsu Province, China

text: Gallus gallus

text: Gallus gallus


text: all cell types

text: L4 (larval 4)

text: whole population

text: wild-type

characteristic: ArrayExpress-PHENOTYPE

text: hermaphrodite

characteristic: ArrayExpress-SEX

text: Caenorhabditis elegans

characteristic: ArrayExpress-SPECIES

text: SC

text: public

text: Caenorhabditis elegans

text: Hermaphrodite

characteristic: gender

text: Caenorhabditis elegans

text: wild-type

characteristic: phenotype

text: Caenorhabditis elegans

characteristic: subject id


text: C. elegans

text: Caenorhabditis elegans

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Caenorhabditis elegans

text: Caenorhabditis elegans

characteristic: organism

text: C. elegans

text: Caenorhabditis elegans

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Center of Biological Engineering

text: public

tag: Namespace:Center of Biological Engineering

unit: kg

characteristic: absolute air humidity

characteristic: air temperature

text: school

characteristic: building occupancy type

text: urban

characteristic: building setting

text: built environment

characteristic: built environment environmental package

unit: µmol/L

characteristic: carbon dioxide

characteristic: collection date

text: MG simulated

characteristic: description

characteristic: environment (biome)

text: 22 organisms

characteristic: environment (feature)

text: 22 organisms

characteristic: environment (material)

text: chemical air filter

characteristic: filter type

text: Portugal

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: forced air system

characteristic: heating and cooling system type

text: foyer

characteristic: indoor space

text: metagenome

characteristic: investigation type

text: natural light

characteristic: light type

characteristic: occupancy at sampling

characteristic: occupant density at sampling

text: bioreactor metagenome

characteristic: organism count

text: Simulated grinder

characteristic: project name

characteristic: relative air humidity

text: bioreactor metagenome

text: illumina

characteristic: sequencing method

text: typically unoccupied

characteristic: space typical state

characteristic: typical occupant density

text: natural ventilation

characteristic: ventilation type


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GERMAN CANCER RESEARCH CENTER (DKFZ)

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:GERMAN CANCER RESEARCH CENTER (DKFZ)

characteristic: Submitter Id

text: human

characteristic: common name

text: To discover novel molecular mechanisms that potentially explain the CMS specific response of YM155 we performed pooled genome-wide CRISPR/Cas9 chemicogenetic screens in HCT116 cells (CMS1).

characteristic: description

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Discovery of novel modifiers of YM155 response by a genome wide CRISPR screen

characteristic: title


text: BIRMINGHAM UNIVERSITY

text: public

tag: Namespace:BIRMINGHAM UNIVERSITY

text: Mycobacterium tuberculosis

text: Purified isolate

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis


text: BIRMINGHAM UNIVERSITY

text: public

text: Mycobacterium Africanum

text: Purified isolate

text: Mycobacterium africanum

text: Mycobacterium africanum


E-MTAB-6337_3:Sample 1

text: The Francis Crick Institute

text: public

text: E-MTAB-6337_3:Sample 1

tag: Namespace:The Francis Crick Institute

text: ArrayExpress

characteristic: broker name

text: HM1 ESC

characteristic: cell line

text: mouse embryonic stem cell

characteristic: cell type

text: house mouse

text: Protocols: ATAC-seq was performed on ESCs and at each day of the differentiation following methods previously described by Buenrostro et al, 2013. Briefly, adherent cells were treated with StemPro Accutase to obtain a single cell suspension. Cells were counted and resuspended to obtain 50,000 cells per sample in ice-cold PBS. Mouse HM1 (wild type), T/Bra-/- and Cdx1,2,4-/- mutant ESC lines ( http://dx.doi.org/10.1016/j.devcel.2017.04.002 Gouti et al, 2017) and inducible Cdx2 ESCs (5ECER5G20, Niwa et al 2005, Cell DOI: 10.1016/j.cell.2005.08.040), were propagated on mitotically inactivated mouse embryonic fibroblasts (feeders) in DMEM knockout medium supplemented with 1000U/ml LIF, 10% cell-culture validated fetal bovine serum, penicillin/streptomycin, 2mM L-glutamine. To obtain neural progenitors with anterior, hindbrain or spinal cord neural identity, ESCs were differentiated as previously described (https://doi.org/10.1371/journal.pbio.1001937 Gouti et al, 2014). Briefly, ESCs were dissociated with 0.05% trypsin, and plated on gelatin-coated plates for two sequential 20 minute periods in ESC medium to separate them from their feeders. To start the differentiation, cells remaining in the supernatant were pelleted by centrifugation, washed in PBS, and pelleted again. Cells were counted and resuspended in N2B27 medium containing 10ng/ml bFGF to a concentration of 106 cells per ml, and 50,000 cells per 35mm CELLBIND dish were plated. To generate anterior neural progenitors, the cells were grown up to day 3 in N2B27 + 10ng/ml bFGF, followed by N2B27 + 500nM smoothened agonist (SAG; Calbiochem) from day 3-5. To generate hindbrain neural progenitors, cells were cultured under the same conditions as the anterior, but were additionally exposed to 100nM retinoic acid (RA; Sigma) from day 3-5. To generate spinal cord neural progenitors, cells were cultured with N2B27 + 10ng/ml bFGF until day 2, N2B27 + 10ng/ml bFGF + 5 micro M CHIR99021 until day 3, and N2B27 + 100nM RA + 500nM SAG until day 5. For the inducible CDX2 experiments, induction of CDX2 was performed using 5ECER4G20 ESCs (Niwa et al., 2005) by adding 1ug/ml of 4-hydroxy tamoxifen (Sigma) (Niwa et al., 2005) between D2-3 (in the presence of 10ng/ml bFGF in N2B27) or D4-5 (in the presence of 10ng/ml bFGF + 100nM RA + 500nM SHH in N2B27). For all differentiations, media changes were made every 24 hours from day 2. Cells were pelleted and resuspended in lysis buffer (10mM Tris-HCl pH 7.4, 10mM NaCl, 3mM MgCl2, 0.1% IGEPAL). Following a 10 min centrifugation at 4 degrees C, nucleic extracts were resupsended in transposition buffer (Illumina) for 30 minutes at 37 degrees C and purified using a Qiagen MinElute PCR Purification kit following manufacturer’s instructions. Transposed DNA was eluted in a 10 micro l volume. Transposed DNA was amplified by PCR with Nextera primers to generate single-indexed libraries. A maximum of 12 cycles of PCR (determined using optimisation experiments) was used to prevent saturation biases based on optimisation of qPCR cycles as previously described in Beunrostro et al 2015. Library quality control was carried out using the Bioanalyzer High-Sensitivity DNA analysis kit as per manufacturer’s instructions.

text: embryo

characteristic: developmental stage

text: normal

characteristic: disease

text: HPRT negative

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: inner cell mass

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: strain

text: Sample 1


E-MTAB-6337_3:Sample 10

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The Francis Crick Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-6337_3:Sample 10

text: ArrayExpress

text: HM1 ESC

text: mouse embryonic stem cell

text: house mouse

text: embryo

text: normal

text: HPRT negative

text: Mus musculus

text: Mus musculus

text: inner cell mass

text: Mus musculus

text: male

text: Sample 10


E-MTAB-6337_3:Sample 11

text: The Francis Crick Institute

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6337_3:Sample 11

characteristic: Submitter Id

text: ArrayExpress

text: HM1 ESC

text: mouse embryonic stem cell

text: house mouse

characteristic: common name

characteristic: description

text: embryo

text: normal

text: T/Bra knock out

text: Mus musculus

characteristic: organism

text: Mus musculus

text: inner cell mass

text: Mus musculus

text: male

text: Sample 11

characteristic: title


E-MTAB-6337_3:Sample 12

text: The Francis Crick Institute

text: public

text: E-MTAB-6337_3:Sample 12

text: ArrayExpress

characteristic: broker name

text: HM1 ESC

characteristic: cell line

text: mouse embryonic stem cell

characteristic: cell type

text: house mouse

text: embryo

characteristic: developmental stage

text: normal

characteristic: disease

text: T/Bra knock out

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: inner cell mass

characteristic: organism part

text: Mus musculus

text: male

text: Sample 12


E-MTAB-6337_3:Sample 13

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The Francis Crick Institute

characteristic: INSDC center name

text: public

text: E-MTAB-6337_3:Sample 13

text: ArrayExpress

text: HM1 ESC

text: mouse embryonic stem cell

text: house mouse

text: embryo

text: normal

text: Cdx1,2,4 knock out

text: Mus musculus

text: Mus musculus

text: inner cell mass

text: Mus musculus

text: male

characteristic: sex

characteristic: strain

text: Sample 13


E-MTAB-6337_3:Sample 14

text: The Francis Crick Institute

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6337_3:Sample 14

characteristic: Submitter Id

text: ArrayExpress

text: HM1 ESC

text: mouse embryonic stem cell

text: house mouse

characteristic: common name

characteristic: description

text: embryo

text: normal

text: Cdx1,2,4 knock out

text: Mus musculus

text: Mus musculus

text: inner cell mass

text: Mus musculus

text: male

text: Sample 14


E-MTAB-6337_3:Sample 15

text: The Francis Crick Institute

text: public

text: E-MTAB-6337_3:Sample 15

text: ArrayExpress

characteristic: broker name

text: HM1 ESC

characteristic: cell line

text: mouse embryonic stem cell

characteristic: cell type

text: house mouse

text: embryo

characteristic: developmental stage

text: normal

characteristic: disease

text: HPRT negative

text: Mus musculus

characteristic: organism

text: Mus musculus

text: inner cell mass

text: anterior neural progenitor differentiation

characteristic: protocol

text: Mus musculus

text: male

text: Sample 15

characteristic: title


E-MTAB-6337_3:Sample 16

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The Francis Crick Institute

characteristic: INSDC center name

text: public

text: E-MTAB-6337_3:Sample 16

text: ArrayExpress

text: HM1 ESC

text: mouse embryonic stem cell

text: house mouse

text: embryo

text: normal

text: HPRT negative

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: inner cell mass

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

text: Sample 16


E-MTAB-6337_3:Sample 17

text: The Francis Crick Institute

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6337_3:Sample 17

characteristic: Submitter Id

text: ArrayExpress

text: HM1 ESC

text: mouse embryonic stem cell

text: house mouse

characteristic: common name

characteristic: description

text: embryo

text: normal

text: HPRT negative

text: Mus musculus

text: Mus musculus

text: inner cell mass

text: hindbrain neural progenitor differentiation

text: Mus musculus

text: male

characteristic: strain

text: Sample 17


E-MTAB-6337_3:Sample 18

text: The Francis Crick Institute

text: public

text: E-MTAB-6337_3:Sample 18

text: ArrayExpress

characteristic: broker name

text: HM1 ESC

characteristic: cell line

text: mouse embryonic stem cell

characteristic: cell type

text: house mouse

text: embryo

characteristic: developmental stage

text: normal

characteristic: disease

text: HPRT negative

text: Mus musculus

characteristic: organism

text: Mus musculus

text: inner cell mass

characteristic: protocol

text: Mus musculus

text: male

text: Sample 18

characteristic: title


E-MTAB-6337_3:Sample 19

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The Francis Crick Institute

characteristic: INSDC center name

text: public

text: E-MTAB-6337_3:Sample 19

text: ArrayExpress

text: HM1 ESC

text: mouse embryonic stem cell

text: house mouse

text: embryo

text: normal

text: HPRT negative

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: inner cell mass

characteristic: organism part

text: spinal cord neural progenitor differentiation

text: Mus musculus

text: male

characteristic: sex

text: Sample 19


E-MTAB-6337_3:Sample 2

text: The Francis Crick Institute

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6337_3:Sample 2

characteristic: Submitter Id

text: ArrayExpress

text: HM1 ESC

text: mouse embryonic stem cell

text: house mouse

characteristic: common name

characteristic: description

text: embryo

text: normal

text: HPRT negative

text: Mus musculus

text: Mus musculus

text: inner cell mass

text: Mus musculus

text: male

characteristic: strain

text: Sample 2


E-MTAB-6337_3:Sample 20

text: The Francis Crick Institute

text: public

text: E-MTAB-6337_3:Sample 20

text: ArrayExpress

characteristic: broker name

text: HM1 ESC

characteristic: cell line

text: mouse embryonic stem cell

characteristic: cell type

text: house mouse

text: embryo

characteristic: developmental stage

text: normal

characteristic: disease

text: HPRT negative

text: Mus musculus

characteristic: organism

text: Mus musculus

text: inner cell mass

characteristic: protocol

text: Mus musculus

text: male

text: Sample 20

characteristic: title


E-MTAB-6337_3:Sample 21

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The Francis Crick Institute

characteristic: INSDC center name

text: public

text: E-MTAB-6337_3:Sample 21

text: ArrayExpress

text: HM1 ESC

text: mouse embryonic stem cell

text: house mouse

text: embryo

text: normal

text: T/Bra knock out

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: inner cell mass

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

text: Sample 21


E-MTAB-6337_3:Sample 22

text: The Francis Crick Institute

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6337_3:Sample 22

characteristic: Submitter Id

text: ArrayExpress

text: HM1 ESC

text: mouse embryonic stem cell

text: house mouse

characteristic: common name

characteristic: description

text: embryo

text: normal

text: T/Bra knock out

text: Mus musculus

text: Mus musculus

text: inner cell mass

text: Mus musculus

text: male

characteristic: strain

text: Sample 22


E-MTAB-6337_3:Sample 23

text: The Francis Crick Institute

text: public

text: E-MTAB-6337_3:Sample 23

text: ArrayExpress

characteristic: broker name

text: HM1 ESC

characteristic: cell line

text: mouse embryonic stem cell

characteristic: cell type

text: house mouse

text: embryo

characteristic: developmental stage

text: normal

characteristic: disease

text: Cdx1,2,4 knock out

text: Mus musculus

characteristic: organism

text: Mus musculus

text: inner cell mass

characteristic: protocol

text: Mus musculus

text: male

text: Sample 23

characteristic: title


E-MTAB-6337_3:Sample 24

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The Francis Crick Institute

characteristic: INSDC center name

text: public

text: E-MTAB-6337_3:Sample 24

text: ArrayExpress

text: HM1 ESC

text: mouse embryonic stem cell

text: house mouse

text: embryo

text: normal

text: Cdx1,2,4 knock out

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: inner cell mass

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

text: Sample 24


E-MTAB-6337_3:Sample 25

text: The Francis Crick Institute

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6337_3:Sample 25

characteristic: Submitter Id

text: ArrayExpress

text: HM1 ESC

text: mouse embryonic stem cell

text: house mouse

characteristic: common name

characteristic: description

text: embryo

text: normal

text: HPRT negative

text: Mus musculus

text: Mus musculus

text: inner cell mass

text: Mus musculus

text: male

characteristic: strain

text: Sample 25


E-MTAB-6337_3:Sample 26

text: The Francis Crick Institute

text: public

text: E-MTAB-6337_3:Sample 26

text: ArrayExpress

characteristic: broker name

text: HM1 ESC

characteristic: cell line

text: mouse embryonic stem cell

characteristic: cell type

text: house mouse

text: embryo

characteristic: developmental stage

text: normal

characteristic: disease

text: HPRT negative

text: Mus musculus

characteristic: organism

text: Mus musculus

text: inner cell mass

characteristic: protocol

text: Mus musculus

text: male

text: Sample 26

characteristic: title


E-MTAB-6337_3:Sample 27

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The Francis Crick Institute

characteristic: INSDC center name

text: public

text: E-MTAB-6337_3:Sample 27

text: ArrayExpress

text: mouse neural progenitor cell

text: house mouse

text: embryonic day 9.5

text: normal

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: embryonic brain

characteristic: organism part

text: Mus musculus

text: not available

characteristic: sex

text: Sample 27


E-MTAB-6337_3:Sample 28

text: The Francis Crick Institute

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6337_3:Sample 28

characteristic: Submitter Id

text: ArrayExpress

text: mouse neural progenitor cell

text: house mouse

characteristic: common name

characteristic: description

text: embryonic day 9.5

text: normal

text: Mus musculus

text: Mus musculus

text: embryonic brain

text: Mus musculus

text: not available

characteristic: strain

text: Sample 28


E-MTAB-6337_3:Sample 29

text: The Francis Crick Institute

text: public

text: E-MTAB-6337_3:Sample 29

text: ArrayExpress

characteristic: broker name

text: HM1 ESC

characteristic: cell line

text: mouse embryonic stem cell

characteristic: cell type

text: house mouse

text: embryo

characteristic: developmental stage

text: normal

characteristic: disease

text: HPRT negative

text: Mus musculus

characteristic: organism

text: Mus musculus

text: inner cell mass

characteristic: protocol

text: Mus musculus

text: male

text: Sample 29

characteristic: title


E-MTAB-6337_3:Sample 3

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The Francis Crick Institute

characteristic: INSDC center name

text: public

text: E-MTAB-6337_3:Sample 3

text: ArrayExpress

text: HM1 ESC

text: mouse embryonic stem cell

text: house mouse

text: embryo

text: normal

text: HPRT negative

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: inner cell mass

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

text: Sample 3


E-MTAB-6337_3:Sample 30

text: The Francis Crick Institute

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6337_3:Sample 30

characteristic: Submitter Id

text: ArrayExpress

text: HM1 ESC

text: mouse embryonic stem cell

text: house mouse

characteristic: common name

characteristic: description

text: embryo

text: normal

text: HPRT negative

text: Mus musculus

text: Mus musculus

text: inner cell mass

text: Mus musculus

text: male

characteristic: strain

text: Sample 30


E-MTAB-6337_3:Sample 31

text: The Francis Crick Institute

text: public

text: E-MTAB-6337_3:Sample 31

text: ArrayExpress

characteristic: broker name

text: HM1 ESC

characteristic: cell line

text: mouse embryonic stem cell

characteristic: cell type

text: house mouse

text: embryo

characteristic: developmental stage

text: normal

characteristic: disease

text: HPRT negative

text: Mus musculus

characteristic: organism

text: Mus musculus

text: inner cell mass

characteristic: protocol

text: Mus musculus

text: male

text: Sample 31

characteristic: title


E-MTAB-6337_3:Sample 32

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The Francis Crick Institute

characteristic: INSDC center name

text: public

text: E-MTAB-6337_3:Sample 32

text: ArrayExpress

text: HM1 ESC

text: mouse embryonic stem cell

text: house mouse

text: embryo

text: normal

text: HPRT negative

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: inner cell mass

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

text: Sample 32


E-MTAB-6337_3:Sample 33

text: The Francis Crick Institute

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6337_3:Sample 33

characteristic: Submitter Id

text: ArrayExpress

text: mouse embryonic stem cell

text: house mouse

characteristic: common name

characteristic: description

text: embryo

text: normal

text: Mus musculus

text: Mus musculus

text: inner cell mass

text: Mus musculus

text: male

characteristic: strain

text: Sample 33


E-MTAB-6337_3:Sample 34

text: The Francis Crick Institute

text: public

text: E-MTAB-6337_3:Sample 34

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: mouse embryonic stem cell

characteristic: cell type

text: house mouse

text: embryo

characteristic: developmental stage

text: normal

characteristic: disease

text: Mus musculus

characteristic: organism

text: Mus musculus

text: inner cell mass

characteristic: protocol

text: Mus musculus

text: male

text: Sample 34

characteristic: title


E-MTAB-6337_3:Sample 35

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The Francis Crick Institute

characteristic: INSDC center name

text: public

text: E-MTAB-6337_3:Sample 35

text: ArrayExpress

text: HM1 ESC

text: mouse embryonic stem cell

text: house mouse

text: embryo

text: normal

text: HPRT negative

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: inner cell mass

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

text: Sample 35


E-MTAB-6337_3:Sample 36

text: The Francis Crick Institute

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6337_3:Sample 36

characteristic: Submitter Id

text: ArrayExpress

text: HM1 ESC

text: mouse embryonic stem cell

text: house mouse

characteristic: common name

characteristic: description

text: embryo

text: normal

text: HPRT negative

text: Mus musculus

text: Mus musculus

text: inner cell mass

text: Mus musculus

text: male

characteristic: strain

text: Sample 36


E-MTAB-6337_3:Sample 37

text: The Francis Crick Institute

text: public

text: E-MTAB-6337_3:Sample 37

text: ArrayExpress

characteristic: broker name

text: HM1 ESC

characteristic: cell line

text: mouse embryonic stem cell

characteristic: cell type

text: house mouse

text: embryo

characteristic: developmental stage

text: normal

characteristic: disease

text: T/Bra knock out

text: Mus musculus

characteristic: organism

text: Mus musculus

text: inner cell mass

characteristic: protocol

text: Mus musculus

text: male

text: Sample 37

characteristic: title


E-MTAB-6337_3:Sample 38

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The Francis Crick Institute

characteristic: INSDC center name

text: public

text: E-MTAB-6337_3:Sample 38

text: ArrayExpress

text: HM1 ESC

text: mouse embryonic stem cell

text: house mouse

text: embryo

text: normal

text: T/Bra knock out

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: inner cell mass

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

text: Sample 38


E-MTAB-6337_3:Sample 39

text: The Francis Crick Institute

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6337_3:Sample 39

characteristic: Submitter Id

text: ArrayExpress

text: HM1 ESC

text: mouse embryonic stem cell

text: house mouse

characteristic: common name

characteristic: description

text: embryo

text: normal

text: Cdx1,2,4 knock out

text: Mus musculus

text: Mus musculus

text: inner cell mass

text: Mus musculus

text: male

characteristic: strain

text: Sample 39


E-MTAB-6337_3:Sample 4

text: The Francis Crick Institute

text: public

text: E-MTAB-6337_3:Sample 4

text: ArrayExpress

characteristic: broker name

text: HM1 ESC

characteristic: cell line

text: mouse embryonic stem cell

characteristic: cell type

text: house mouse

text: embryo

characteristic: developmental stage

text: normal

characteristic: disease

text: HPRT negative

text: Mus musculus

characteristic: organism

text: Mus musculus

text: inner cell mass

text: Mus musculus

text: male

text: Sample 4

characteristic: title


E-MTAB-6337_3:Sample 40

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The Francis Crick Institute

characteristic: INSDC center name

text: public

text: E-MTAB-6337_3:Sample 40

text: ArrayExpress

text: HM1 ESC

text: mouse embryonic stem cell

text: house mouse

text: embryo

text: normal

text: Cdx1,2,4 knock out

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: inner cell mass

characteristic: organism part

characteristic: protocol

text: Mus musculus

text: male

text: Sample 40


E-MTAB-6337_3:Sample 41

text: The Francis Crick Institute

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6337_3:Sample 41

characteristic: Submitter Id

text: ArrayExpress

text: mouse embryonic stem cell

text: house mouse

characteristic: common name

characteristic: description

text: embryo

text: normal

text: Mus musculus

text: Mus musculus

text: inner cell mass

text: Mus musculus

text: male

characteristic: sex

text: Sample 41