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characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: antibiotic

characteristic: miscellaneous parameter

text: gut metagenome

characteristic: organism

text: gut metagenome

text: Illumina

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ISTITUTO SUPERIORE DI SANITA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:ISTITUTO SUPERIORE DI SANITA

characteristic: Submitter Id

text: Istituto Superiore di Sanità

characteristic: collecting institution

text: Marco Di Luca

characteristic: collector name

text: Italy

text: calabria

characteristic: geographic location (region and locality)

text: mosquito

characteristic: host common name

text: not provided

characteristic: host health state

text: Aedes albopictus

characteristic: host scientific name

text: female

characteristic: host sex

text: vero cells

characteristic: isolate

text: Chikungunya virus

text: Chikungunya virus

text: Chikungunya complete genome from Aedes albopictus infected during Calabria outbreak 2017


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ISTITUTO SUPERIORE DI SANITA

text: public

text: Istituto Superiore di Sanità

characteristic: collection date

text: Venturi Giulietta

text: Italy

characteristic: geographic location (country and/or sea)

text: calabria

text: human

text: diseased

text: human serum

text: not provided

characteristic: host subject id

text: vero cells

text: Chikungunya virus

characteristic: organism

text: Chikungunya virus

text: Chikungunya complete genome from human serum during Calabria outbreak 2017

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ISTITUTO SUPERIORE DI SANITA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Istituto Superiore di Sanità

text: Venturi Giulietta

text: Italy

text: calabria

text: human

text: diseased

text: serum

text: not provided

text: vero cells

text: Chikungunya virus

text: Chikungunya virus


text: ISTITUTO SUPERIORE DI SANITA

text: public

characteristic: Submitter Id

text: Istituto Superiore di Sanità

characteristic: collecting institution

text: Giulietta Venturi

characteristic: collector name

text: Italy

text: calabria

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: diseased

characteristic: host health state

text: serum

characteristic: host scientific name

text: not provided

text: vero cells

text: Chikungunya virus

text: Chikungunya virus


Italy/Emilia Romagna-ISS-1/2007

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ISTITUTO SUPERIORE DI SANITA

text: public

text: Italy/Emilia Romagna-ISS-1/2007

text: Istituto Superiore di Sanità

characteristic: collection date

text: Claudia Fortuna

text: Italy

characteristic: geographic location (country and/or sea)

text: Emilia Romagna

text: human

text: diseased

text: serum

text: male

characteristic: host sex

characteristic: host subject id

text: vero cells

characteristic: isolate

text: Chikungunya virus

text: Chikungunya virus

text: Chikungunya complete genome from human serum during Emilia Romagna outbreak 2007


Italy/Emilia Romagna-ISS-2/2007

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ISTITUTO SUPERIORE DI SANITA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Italy/Emilia Romagna-ISS-2/2007

text: Istituto Superiore di Sanità

text: Claudia Fortuna

text: Italy

text: Emilia Romagna

text: human

text: diseased

text: serum

text: male

text: vero cells

text: Chikungunya virus

characteristic: organism

text: Chikungunya virus

characteristic: title


text: Haemophilus influenzae

characteristic: ArrayExpress-SPECIES

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Haemophilus influenzae

characteristic: common name

text: Haemophilus influenzae

text: Haemophilus influenzae

characteristic: subject id


text: Moraxella catarrhalis

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: Moraxella catarrhalis

text: Moraxella catarrhalis

text: Moraxella catarrhalis


text: Staphylococcus aureus

text: SC

text: public

text: Staphylococcus aureus

text: Staphylococcus aureus

text: Staphylococcus aureus


text: Staphylococcus aureus

text: SC

text: public

text: Staphylococcus aureus

text: Staphylococcus aureus

text: Staphylococcus aureus


N. lenta BS10

text: Microbiology Department, IWWR

text: public

text: N. lenta BS10

tag: Namespace:Microbiology Department, IWWR

text: Nitrospira lenta

text: Nitrospira lenta

text: Complete genome of Nitrospira lenta BS10


text: SC

text: public

characteristic: anonymized name

characteristic: collection date

text: Clostridium butyricum

text: United Kingdom

characteristic: country

text: carriage

characteristic: host status

text: faecal

characteristic: isolation source

text: Clostridium butyricum

text: Bacterial Genome

characteristic: sample description

text: Clostridium butyricum

text: human

characteristic: specific host

characteristic: strain


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Erysipelatoclostridium ramosum

text: United Kingdom

text: carriage

text: faecal

text: Erysipelatoclostridium ramosum

characteristic: organism

text: Bacterial Genome

text: Erysipelatoclostridium ramosum

text: human

characteristic: title


text: Clostridium perfringens

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Clostridium perfringens

characteristic: common name

text: Clostridium perfringens

text: Clostridium perfringens

characteristic: subject id


text: Escherichia coli

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli


text: Enterobacter cloacae

text: SC

text: public

text: Enterobacter cloacae

text: Enterobacter cloacae

text: Enterobacter cloacae


text: SC

text: public

characteristic: anonymized name

characteristic: collection date

text: Enterococcus casseliflavus

text: United Kingdom

characteristic: country

text: carriage

characteristic: host status

text: faecal

characteristic: isolation source

text: Enterococcus casseliflavus

text: Bacterial Genome

characteristic: sample description

text: Enterococcus casseliflavus

text: human

characteristic: specific host


text: Citrobacter freundii

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Citrobacter freundii

text: Citrobacter freundii

characteristic: organism

text: Citrobacter freundii


text: Serratia marcescens

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Serratia marcescens

text: Serratia marcescens

text: Serratia marcescens

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

characteristic: anonymized name

characteristic: collection date

text: Serratia marcescens

characteristic: common name

text: United Kingdom

characteristic: country

text: carriage

text: faecal

text: Serratia marcescens

text: Bacterial Genome

text: Serratia marcescens

text: human

characteristic: strain


text: Klebsiella pneumoniae

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

characteristic: subject id


text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Enterococcus faecium

text: United Kingdom

text: carriage

characteristic: host status

text: faecal

characteristic: isolation source

text: Enterococcus faecium

text: Bacterial Genome

characteristic: sample description

text: Enterococcus faecium

text: human

characteristic: specific host


characteristic: ENA-CHECKLIST

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Clostridium perfringens

text: United Kingdom

text: carriage

text: faecal

text: Clostridium perfringens

characteristic: organism

text: Bacterial Genome

text: Clostridium perfringens

text: human

characteristic: title


text: Enterococcus faecalis

characteristic: ArrayExpress-SPECIES

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: Enterococcus faecalis

characteristic: common name

text: Enterococcus faecalis

text: Enterococcus faecalis


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

characteristic: anonymized name

characteristic: collection date

text: Enterococcus faecalis

text: United Kingdom

characteristic: country

text: carriage

text: faecal

text: Enterococcus faecalis

text: Bacterial Genome

text: Enterococcus faecalis

text: human

characteristic: strain


text: Clostridium baratii

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Clostridium baratii

text: Clostridium baratii

text: Clostridium baratii

characteristic: subject id


text: Klebsiella oxytoca

characteristic: ENA-CHECKLIST

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Klebsiella oxytoca

text: Klebsiella oxytoca

text: Klebsiella oxytoca


text: SC

text: public

characteristic: Submitter Id

text: Escherichia coli

text: United Kingdom

text: carriage

characteristic: host status

text: faecal

characteristic: isolation source

text: Escherichia coli

characteristic: organism

text: Bacterial Genome

characteristic: sample description

text: Escherichia coli

text: human

characteristic: specific host

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

characteristic: anonymized name

characteristic: collection date

text: Lactobacillus rhamnosus

characteristic: common name

text: United Kingdom

text: carriage

text: faecal

text: Lactobacillus rhamnosus

text: Bacterial Genome

text: Lactobacillus rhamnosus

text: human


text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Staphylococcus aureus

text: United Kingdom

characteristic: country

text: carriage

text: faecal

text: Staphylococcus aureus

text: Bacterial Genome

text: Staphylococcus aureus

text: human

characteristic: strain


characteristic: ENA-CHECKLIST

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Staphylococcus epidermidis

text: United Kingdom

text: carriage

characteristic: host status

text: faecal

text: Staphylococcus epidermidis

text: Bacterial Genome

text: Staphylococcus epidermidis

text: human


text: SC

text: public

text: Klebsiella pneumoniae

text: United Kingdom

text: carriage

text: faecal

characteristic: isolation source

text: Klebsiella pneumoniae

characteristic: organism

text: Bacterial Genome

characteristic: sample description

text: Klebsiella pneumoniae

text: human

characteristic: specific host

characteristic: title


text: Enterobacter cloacae

characteristic: ArrayExpress-SPECIES

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: Enterobacter cloacae

text: Enterobacter cloacae

text: Enterobacter cloacae

characteristic: subject id


text: Klebsiella pneumoniae

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Klebsiella pneumoniae

characteristic: common name

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


characteristic: ENA-CHECKLIST

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Wellcome Trust/Cancer Research UK Gurdon Institute Department of Genetics, University of Cambridge Wellcome Trust Sanger Institute

text: ArrayExpress

characteristic: broker name

text: honey bee

text: Protocols: Royal jellies were produced in collaboration with Springwell Apiaries, UK. Royal jelly was harvested from brood cells containing 6-8 days old queen larvae. Prior to jelly harvest, larvae were carefully removed and checked for any physical damage. 1 ml raw Royal Jelly was diluted with 1.5 ml nuclease-free water and split into two aliquots(1.25 ml per tube). 500 µl of biotinylated protein (MRJP-3 or BSA) was added to eachRoyal Jelly aliquot and rotated overnight at 4°C. Next, the Royal Jelly pH was adjusted to 5-5.5 byadding 0.23 ml of 500 mM Tris pH 8.8 (1.98 ml per treatment). Each Royal-Jelly-biotinylatedprotein mixture was then split into two tubes containing 0.4 ml pre-washed PierceStreptavidin magnetic beads (Thermo Scientific; catalog no. 88816) and incubated inroom temperature for 3 hours (~1.4x2 ml per protein treatment). Beads were thenplaced in magnetic stands for 10 min followed by removal of the Royal Jelly solutions. Next,beads were washed with 0.5 ml 1xPBS for 10 min at room temperature. After threewash steps, 0.35 ml 1xPBS was added to each beads tube, followed byPhenol/Chloroform/Isoamyl alcohol RNA extraction. RNA was purified from by the phenol/chloroform/isoamyl alcohol (pH 8) extraction method eluted with nuclease free water. Total RNA extracted from Royal Jelly or pulled down MJ3-bound RNA was first subjected to Tobacco Acid Pyrophosphatase (TAP) and Polynucleotide kinase. Next, total stranded RNA library preparations were performed using the TrueSeq stranded total RNA sample preparation kit (Illumina) according to manufacturer’s instructions omitting the rRNA removal and fragmentation steps since input RNA was of low molecular weight and did not contain obvious rRNA contaminants.

characteristic: description

text: MRJP-3 bound

characteristic: fraction

text: Apis mellifera

text: Apis mellifera

text: royal jelly

characteristic: organism part

characteristic: replicate

text: Apis mellifera


text: Wellcome Trust/Cancer Research UK Gurdon Institute Department of Genetics, University of Cambridge Wellcome Trust Sanger Institute

text: public

characteristic: Submitter Id

text: ArrayExpress

text: honey bee

text: MRJP-3 bound

text: Apis mellifera

characteristic: organism

text: Apis mellifera

text: royal jelly

text: Apis mellifera

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: ArrayExpress

text: honey bee

text: total royal jelly

text: Apis mellifera

text: Apis mellifera

text: royal jelly

text: Apis mellifera


text: UNIVERSITY MEDICAL CENTER UTRECHT

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:UNIVERSITY MEDICAL CENTER UTRECHT

text: house mouse

text: PacBio data; Viewpoint=BMajor

text: Mus musculus

text: Mus musculus

text: LVR-BMaj-PB


characteristic: INSDC last update

text: public

tag: Namespace:UNIVERSITY OF COPENHAGEN, SECTION OF MICROBIOLOGY

text: gut metagenome

text: gut metagenome

text: Neomune 2015 exp. 1


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF COPENHAGEN, SECTION OF MICROBIOLOGY

text: public

text: gut metagenome

text: gut metagenome

text: Neomune 2015 exp. 1


text: public

characteristic: INSDC status

text: gut metagenome

text: gut metagenome

text: Neomune 2016 exp. 2


text: DUKE UNIV

text: public

characteristic: SRA accession

unit: L

characteristic: amount or size of sample collected

characteristic: collection date

text: run 1 vessel 1 (aerobic, control) day -2

text: fecal environment

characteristic: environment (biome)

text: feces

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: gut

characteristic: host body habitat

text: ex vivo feces culture

characteristic: host body product

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: Aerobic, control

characteristic: miscellaneous parameter

text: gut metagenome

characteristic: project name

characteristic: sample storage temperature

text: gut metagenome

text: Illumina

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DUKE UNIV

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: amount or size of sample collected

text: run 1 vessel 2 (aerobic, antibiotic) day -2

characteristic: description

text: fecal environment

text: feces

text: feces

text: USA

text: gut

text: ex vivo feces culture

text: host-associated

text: metagenome

text: Aerobic, antibiotic

text: gut metagenome

characteristic: organism

text: gut metagenome

text: Illumina

characteristic: title


text: DUKE UNIV

text: public

characteristic: collection date

text: run 1 vessel 3 (anaerobic, control) day -2

text: fecal environment

characteristic: environment (biome)

text: feces

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: gut

characteristic: host body habitat

text: ex vivo feces culture

characteristic: host body product

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: Anaerobic, control

characteristic: miscellaneous parameter

text: gut metagenome

characteristic: project name

text: gut metagenome

text: Illumina


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DUKE UNIV

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: amount or size of sample collected

text: run 1 vessel 4 (anaerobic, antibiotic) day -2

characteristic: description

text: fecal environment

text: feces

text: feces

text: USA

text: gut

text: ex vivo feces culture

text: host-associated

text: metagenome

text: Anaerobic, antibiotic

text: gut metagenome

characteristic: sample storage temperature

text: gut metagenome

text: Illumina

characteristic: sequencing method


text: DUKE UNIV

text: public

characteristic: collection date

text: run 1 vessel 1 (aerobic, control) day -1

text: fecal environment

characteristic: environment (biome)

text: feces

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: gut

characteristic: host body habitat

text: ex vivo feces culture

characteristic: host body product

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: Aerobic, control

text: gut metagenome

characteristic: organism

text: gut metagenome

text: Illumina

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DUKE UNIV

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: amount or size of sample collected

text: run 1 vessel 2 (aerobic, antibiotic) day -1

characteristic: description

text: fecal environment

text: feces

text: feces

text: USA

text: gut

text: ex vivo feces culture

text: host-associated

text: metagenome

text: Aerobic, antibiotic

characteristic: miscellaneous parameter

text: gut metagenome

characteristic: project name

text: gut metagenome

text: Illumina


text: DUKE UNIV

text: public

characteristic: collection date

text: run 1 vessel 3 (anaerobic, control) day -1

text: fecal environment

characteristic: environment (biome)

text: feces

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: gut

characteristic: host body habitat

text: ex vivo feces culture

characteristic: host body product

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: Anaerobic, control

text: gut metagenome

characteristic: sample storage temperature

text: gut metagenome

text: Illumina

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DUKE UNIV

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: amount or size of sample collected

text: run 1 vessel 4 (anaerobic, antibiotic) day -1

characteristic: description

text: fecal environment

text: feces

text: feces

text: USA

text: gut

text: ex vivo feces culture

text: host-associated

text: metagenome

text: Anaerobic, antibiotic

text: gut metagenome

characteristic: organism

text: gut metagenome

text: Illumina

characteristic: title


text: DUKE UNIV

text: public

characteristic: collection date

text: run 1 vessel 1 (aerobic, control) day 0

text: fecal environment

characteristic: environment (biome)

text: feces

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: gut

characteristic: host body habitat

text: ex vivo feces culture

characteristic: host body product

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: Aerobic, control

characteristic: miscellaneous parameter

text: gut metagenome

characteristic: project name

text: gut metagenome

text: Illumina


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DUKE UNIV

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: amount or size of sample collected

text: run 1 vessel 2 (aerobic, antibiotic) day 0

characteristic: description

text: fecal environment

text: feces

text: feces

text: USA

text: gut

text: ex vivo feces culture

text: host-associated

text: metagenome

text: Aerobic, antibiotic

text: gut metagenome

characteristic: sample storage temperature

text: gut metagenome

text: Illumina

characteristic: sequencing method


text: DUKE UNIV

text: public

characteristic: collection date

text: run 1 vessel 3 (anaerobic, control) day 0

text: fecal environment

characteristic: environment (biome)

text: feces

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: gut

characteristic: host body habitat

text: ex vivo feces culture

characteristic: host body product

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: Anaerobic, control

text: gut metagenome

characteristic: organism

text: gut metagenome

text: Illumina

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DUKE UNIV

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: amount or size of sample collected

text: run 1 vessel 4 (anaerobic, antibiotic) day 0

characteristic: description

text: fecal environment

text: feces

text: feces

text: USA

text: gut

text: ex vivo feces culture

text: host-associated

text: metagenome

text: Anaerobic, antibiotic

characteristic: miscellaneous parameter

text: gut metagenome

characteristic: project name

text: gut metagenome

text: Illumina


text: DUKE UNIV

text: public

characteristic: collection date

text: run 1 vessel 1 (aerobic, control) day 1

text: fecal environment

characteristic: environment (biome)

text: feces

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: gut

characteristic: host body habitat

text: ex vivo feces culture

characteristic: host body product

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: Aerobic, control

text: gut metagenome

characteristic: sample storage temperature

text: gut metagenome

text: Illumina

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DUKE UNIV

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

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characteristic: Submitter Id

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