characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: 2503:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

text: Uchime

characteristic: chimera check

characteristic: collection date

text: Patient_4 Buccal T7

characteristic: description

characteristic: environment (biome)

text: mouth [UBERON:0000165]

characteristic: environment (feature)

text: mouth mucosa [UBERON:0003729]

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: Epithelium of mucosa of mouth

characteristic: host body site

text: Burkitt lymphoma

text: female

text: human-oral

text: mimarks-survey

text: PMID 22515215

text: human oral metagenome

text: human oral metagenome

text: Illumina sequencing

text: 16S rRNA

characteristic: title


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: 2504:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

text: GFBIO

text: Uchime

text: Patient_4 Buccal T8

text: anthropogenic terrestrial biome [ENVO:01000219]

text: mouth [UBERON:0000165]

text: mouth mucosa [UBERON:0003729]

text: Belgium

unit: DD

unit: year

text: Epithelium of mucosa of mouth

text: Burkitt lymphoma

characteristic: host disease status

text: female

characteristic: host sex

characteristic: host subject id

text: human-oral

characteristic: human oral environmental package

text: mimarks-survey

characteristic: investigation type

text: PMID 22515215

characteristic: nucleic acid extraction

text: human oral metagenome

characteristic: organism

text: initial denaturation:96degC_2min; annealing:96degC_15s; elongation: 50degC_50s; final elongation:70degC_90s

characteristic: pcr conditions

text: FWD:NNNNNNNNNTCCTACGGGNGGCWGCAG; REV:NNNNNNNNNNTGACTACHVGGGTATCTAAKCC

characteristic: pcr primers

characteristic: project name

unit: °C

characteristic: sample storage temperature

text: human oral metagenome

text: Illumina sequencing

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: 2505:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

text: Uchime

characteristic: chimera check

characteristic: collection date

text: Patient_4 Buccal T9

characteristic: description

characteristic: environment (biome)

text: mouth [UBERON:0000165]

characteristic: environment (feature)

text: mouth mucosa [UBERON:0003729]

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: Epithelium of mucosa of mouth

characteristic: host body site

text: Burkitt lymphoma

text: female

text: human-oral

text: mimarks-survey

text: PMID 22515215

text: human oral metagenome

text: human oral metagenome

text: Illumina sequencing

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: 2506:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

text: GFBIO

text: Uchime

text: Patient_4 Buccal T10

text: mouth [UBERON:0000165]

text: mouth mucosa [UBERON:0003729]

text: Belgium

text: Epithelium of mucosa of mouth

text: Burkitt lymphoma

characteristic: host disease status

text: female

characteristic: host sex

characteristic: host subject id

text: human-oral

characteristic: human oral environmental package

text: mimarks-survey

characteristic: investigation type

text: Mucositis grade 1

characteristic: nose/mouth/teeth/throat disorder

text: PMID 22515215

characteristic: nucleic acid extraction

text: human oral metagenome

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

characteristic: project name

characteristic: sample storage temperature

text: human oral metagenome

text: Illumina sequencing

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: 2507:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

text: Uchime

characteristic: chimera check

characteristic: collection date

text: Patient_4 Buccal T11

characteristic: description

characteristic: environment (biome)

text: mouth [UBERON:0000165]

characteristic: environment (feature)

text: mouth mucosa [UBERON:0003729]

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: Epithelium of mucosa of mouth

characteristic: host body site

text: Burkitt lymphoma

text: female

text: human-oral

text: mimarks-survey

text: Mucositis grade 3

text: PMID 22515215

text: human oral metagenome

text: human oral metagenome

text: Illumina sequencing

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: 2508:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

text: GFBIO

text: Uchime

text: Patient_4 Buccal T13

text: mouth [UBERON:0000165]

text: mouth mucosa [UBERON:0003729]

text: Belgium

text: Epithelium of mucosa of mouth

text: Burkitt lymphoma

characteristic: host disease status

text: female

characteristic: host sex

characteristic: host subject id

text: human-oral

characteristic: human oral environmental package

text: mimarks-survey

characteristic: investigation type

text: Mucositis grade 2

characteristic: nose/mouth/teeth/throat disorder

text: PMID 22515215

characteristic: nucleic acid extraction

text: human oral metagenome

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

characteristic: project name

characteristic: sample storage temperature

text: human oral metagenome

text: Illumina sequencing

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: 2509:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

text: Uchime

characteristic: chimera check

characteristic: collection date

text: Patient_4 Buccal T14

characteristic: description

characteristic: environment (biome)

text: mouth [UBERON:0000165]

characteristic: environment (feature)

text: mouth mucosa [UBERON:0003729]

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: Epithelium of mucosa of mouth

characteristic: host body site

text: Burkitt lymphoma

text: female

text: human-oral

text: mimarks-survey

text: Mucositis grade 1

text: PMID 22515215

text: human oral metagenome

text: human oral metagenome

text: Illumina sequencing

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: 2510:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

text: GFBIO

text: Uchime

text: Patient_4 Buccal T15

text: mouth [UBERON:0000165]

text: mouth mucosa [UBERON:0003729]

text: Belgium

text: Epithelium of mucosa of mouth

text: Burkitt lymphoma

characteristic: host disease status

text: female

characteristic: host sex

characteristic: host subject id

text: human-oral

characteristic: human oral environmental package

text: mimarks-survey

characteristic: investigation type

text: PMID 22515215

characteristic: nucleic acid extraction

text: human oral metagenome

characteristic: organism

characteristic: pcr conditions

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characteristic: project name

characteristic: sample storage temperature

text: human oral metagenome

text: Illumina sequencing

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: 2511:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

text: Uchime

characteristic: chimera check

characteristic: collection date

text: Patient_4 Buccal T18

characteristic: description

characteristic: environment (biome)

text: mouth [UBERON:0000165]

characteristic: environment (feature)

text: mouth mucosa [UBERON:0003729]

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: Epithelium of mucosa of mouth

characteristic: host body site

text: Burkitt lymphoma

text: female

text: human-oral

text: mimarks-survey

text: PMID 22515215

text: human oral metagenome

text: human oral metagenome

text: Illumina sequencing

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: 2512:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

text: GFBIO

text: Uchime

text: Patient_4 Buccal T19

text: mouth [UBERON:0000165]

text: mouth mucosa [UBERON:0003729]

text: Belgium

text: Epithelium of mucosa of mouth

text: Burkitt lymphoma

characteristic: host disease status

text: female

characteristic: host sex

characteristic: host subject id

text: human-oral

characteristic: human oral environmental package

text: mimarks-survey

characteristic: investigation type

text: PMID 22515215

characteristic: nucleic acid extraction

text: human oral metagenome

characteristic: organism

characteristic: pcr conditions

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characteristic: project name

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text: human oral metagenome

text: Illumina sequencing

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: 2513:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

text: Uchime

characteristic: chimera check

characteristic: collection date

text: Patient_4 Lesion T3

characteristic: description

characteristic: environment (biome)

text: mouth [UBERON:0000165]

characteristic: environment (feature)

text: mouth mucosa [UBERON:0003729]

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: Epithelium of mucosa of mouth

characteristic: host body site

text: Burkitt lymphoma

text: female

text: human-oral

text: mimarks-survey

text: Mucositis grade 2

characteristic: nose/mouth/teeth/throat disorder

text: PMID 22515215

text: human oral metagenome

text: human oral metagenome

text: Illumina sequencing

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: 2514:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

text: GFBIO

text: Uchime

text: Patient_4 Lesion T4

text: mouth [UBERON:0000165]

text: mouth mucosa [UBERON:0003729]

text: Belgium

text: Epithelium of mucosa of mouth

text: Burkitt lymphoma

characteristic: host disease status

text: female

characteristic: host sex

characteristic: host subject id

text: human-oral

characteristic: human oral environmental package

text: mimarks-survey

characteristic: investigation type

text: Mucositis grade 3

text: PMID 22515215

characteristic: nucleic acid extraction

text: human oral metagenome

characteristic: organism

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text: human oral metagenome

text: Illumina sequencing

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: 2515:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

text: Uchime

characteristic: chimera check

characteristic: collection date

text: Patient_4 Lesion T6

characteristic: description

characteristic: environment (biome)

text: mouth [UBERON:0000165]

characteristic: environment (feature)

text: mouth mucosa [UBERON:0003729]

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: Epithelium of mucosa of mouth

characteristic: host body site

text: Burkitt lymphoma

text: female

text: human-oral

text: mimarks-survey

text: Mucositis grade 2

characteristic: nose/mouth/teeth/throat disorder

text: PMID 22515215

text: human oral metagenome

text: human oral metagenome

text: Illumina sequencing

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: 2516:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

text: GFBIO

text: Uchime

text: Patient_4 Lesion T10

text: mouth [UBERON:0000165]

text: mouth mucosa [UBERON:0003729]

text: Belgium

text: Epithelium of mucosa of mouth

text: Burkitt lymphoma

characteristic: host disease status

text: female

characteristic: host sex

characteristic: host subject id

text: human-oral

characteristic: human oral environmental package

text: mimarks-survey

characteristic: investigation type

text: Mucositis grade 1

text: PMID 22515215

characteristic: nucleic acid extraction

text: human oral metagenome

characteristic: organism

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text: human oral metagenome

text: Illumina sequencing

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: 2517:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

text: Uchime

characteristic: chimera check

characteristic: collection date

text: Patient_4 Lesion T11

characteristic: description

characteristic: environment (biome)

text: mouth [UBERON:0000165]

characteristic: environment (feature)

text: mouth mucosa [UBERON:0003729]

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: Epithelium of mucosa of mouth

characteristic: host body site

text: Burkitt lymphoma

text: female

text: human-oral

text: mimarks-survey

text: Mucositis grade 3

characteristic: nose/mouth/teeth/throat disorder

text: PMID 22515215

text: human oral metagenome

text: human oral metagenome

text: Illumina sequencing

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: 2518:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

text: GFBIO

text: Uchime

text: Patient_4 Lesion T13

text: mouth [UBERON:0000165]

text: mouth mucosa [UBERON:0003729]

text: Belgium

text: Epithelium of mucosa of mouth

text: Burkitt lymphoma

characteristic: host disease status

text: female

characteristic: host sex

characteristic: host subject id

text: human-oral

characteristic: human oral environmental package

text: mimarks-survey

characteristic: investigation type

text: Mucositis grade 2

text: PMID 22515215

characteristic: nucleic acid extraction

text: human oral metagenome

characteristic: organism

characteristic: pcr conditions

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characteristic: project name

characteristic: sample storage temperature

text: human oral metagenome

text: Illumina sequencing

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: 2519:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

text: Uchime

characteristic: chimera check

characteristic: collection date

text: Patient_4 Lesion T14

characteristic: description

text: anthropogenic terrestrial biome [ENVO:01000219]

characteristic: environment (biome)

text: mouth [UBERON:0000165]

characteristic: environment (feature)

text: mouth mucosa [UBERON:0003729]

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: Epithelium of mucosa of mouth

characteristic: host body site

text: Burkitt lymphoma

text: female

text: human-oral

text: mimarks-survey

text: Mucositis grade 1

characteristic: nose/mouth/teeth/throat disorder

text: PMID 22515215

text: human oral metagenome

text: human oral metagenome

text: Illumina sequencing

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: 2520:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

text: GFBIO

text: Uchime

text: Patient_5 Saliva T2

text: mouth [UBERON:0000165]

text: saliva [UBERON:0001836]

text: Belgium

text: saliva

characteristic: host body product

text: Acute promyelocytic leukemia

characteristic: host disease status

text: female

characteristic: host sex

characteristic: host subject id

text: human-oral

characteristic: human oral environmental package

text: mimarks-survey

characteristic: investigation type

text: PMID 22515215

characteristic: nucleic acid extraction

text: human oral metagenome

characteristic: organism

text: initial denaturation:96degC_2min; annealing:96degC_15s; elongation: 50degC_50s; final elongation:70degC_90s

characteristic: pcr conditions

text: FWD:NNNNNNNNNTCCTACGGGNGGCWGCAG; REV:NNNNNNNNNNTGACTACHVGGGTATCTAAKCC

characteristic: pcr primers

characteristic: project name

characteristic: sample storage temperature

text: human oral metagenome

text: Illumina sequencing

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: 2521:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

text: Uchime

characteristic: chimera check

characteristic: collection date

text: Patient_5 Saliva T3

characteristic: description

characteristic: environment (biome)

text: mouth [UBERON:0000165]

characteristic: environment (feature)

text: saliva [UBERON:0001836]

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: saliva

text: Acute promyelocytic leukemia

text: female

text: human-oral

text: mimarks-survey

text: PMID 22515215

text: human oral metagenome

text: human oral metagenome

text: Illumina sequencing

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: 2522:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

text: GFBIO

text: Uchime

text: Patient_5 Saliva T4

text: mouth [UBERON:0000165]

text: saliva [UBERON:0001836]

text: Belgium

text: saliva

characteristic: host body product

text: Acute promyelocytic leukemia

characteristic: host disease status

text: female

characteristic: host sex

characteristic: host subject id

text: human-oral

characteristic: human oral environmental package

text: mimarks-survey

characteristic: investigation type

text: PMID 22515215

characteristic: nucleic acid extraction

text: human oral metagenome

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

characteristic: project name

characteristic: sample storage temperature

text: human oral metagenome

text: Illumina sequencing

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: 2523:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

text: Uchime

characteristic: chimera check

characteristic: collection date

text: Patient_5 Saliva T6

characteristic: description

characteristic: environment (biome)

text: mouth [UBERON:0000165]

characteristic: environment (feature)

text: saliva [UBERON:0001836]

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: saliva

text: Acute promyelocytic leukemia

text: female

text: human-oral

text: mimarks-survey

text: Mucositis grade 1

characteristic: nose/mouth/teeth/throat disorder

text: PMID 22515215

text: human oral metagenome

text: human oral metagenome

text: Illumina sequencing

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: 2524:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

text: GFBIO

text: Uchime

text: Patient_5 Saliva T8

text: mouth [UBERON:0000165]

text: saliva [UBERON:0001836]

text: Belgium

text: saliva

characteristic: host body product

text: Acute promyelocytic leukemia

characteristic: host disease status

text: female

characteristic: host sex

characteristic: host subject id

text: human-oral

characteristic: human oral environmental package

text: mimarks-survey

characteristic: investigation type

text: Mucositis grade 1

text: PMID 22515215

characteristic: nucleic acid extraction

text: human oral metagenome

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

characteristic: project name

characteristic: sample storage temperature

text: human oral metagenome

text: Illumina sequencing

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: 2525:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

text: Uchime

characteristic: chimera check

characteristic: collection date

text: Patient_5 Saliva T9

characteristic: description

characteristic: environment (biome)

text: mouth [UBERON:0000165]

characteristic: environment (feature)

text: saliva [UBERON:0001836]

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: saliva

text: Acute promyelocytic leukemia

text: female

text: human-oral

text: mimarks-survey

text: Mucositis grade 2

characteristic: nose/mouth/teeth/throat disorder

text: PMID 22515215

text: human oral metagenome

text: human oral metagenome

text: Illumina sequencing

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: 2526:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

text: GFBIO

text: Uchime

text: Patient_5 Saliva T11

text: mouth [UBERON:0000165]

text: saliva [UBERON:0001836]

text: Belgium

text: saliva

characteristic: host body product

text: Acute promyelocytic leukemia

characteristic: host disease status

text: female

characteristic: host sex

characteristic: host subject id

text: human-oral

characteristic: human oral environmental package

text: mimarks-survey

characteristic: investigation type

text: PMID 22515215

characteristic: nucleic acid extraction

text: human oral metagenome

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

characteristic: project name

characteristic: sample storage temperature

text: human oral metagenome

text: Illumina sequencing

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: 2527:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

text: Uchime

characteristic: chimera check

characteristic: collection date

text: Patient_5 Saliva T13

characteristic: description

characteristic: environment (biome)

text: mouth [UBERON:0000165]

characteristic: environment (feature)

text: saliva [UBERON:0001836]

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: saliva

text: Acute promyelocytic leukemia

text: female

text: human-oral

text: mimarks-survey

text: PMID 22515215

text: human oral metagenome

text: human oral metagenome

text: Illumina sequencing

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: 2528:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

text: GFBIO

text: Uchime

text: Patient_5 Saliva T15

text: mouth [UBERON:0000165]

text: saliva [UBERON:0001836]

text: Belgium

text: saliva

characteristic: host body product

text: Acute promyelocytic leukemia

characteristic: host disease status

text: female

characteristic: host sex

characteristic: host subject id

text: human-oral

characteristic: human oral environmental package

text: mimarks-survey

characteristic: investigation type

text: PMID 22515215

characteristic: nucleic acid extraction

text: human oral metagenome

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

characteristic: project name

characteristic: sample storage temperature

text: human oral metagenome

text: Illumina sequencing

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: 2529:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

text: Uchime

characteristic: chimera check

characteristic: collection date

text: Patient_5 Saliva T17

characteristic: description

characteristic: environment (biome)

text: mouth [UBERON:0000165]

characteristic: environment (feature)

text: saliva [UBERON:0001836]

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: saliva

text: Acute promyelocytic leukemia

text: female

text: human-oral

text: mimarks-survey

text: Mucositis grade 2

characteristic: nose/mouth/teeth/throat disorder

text: PMID 22515215

text: human oral metagenome

text: human oral metagenome

text: Illumina sequencing

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: 2530:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

text: GFBIO

text: Uchime

text: Patient_5 Saliva T18

text: mouth [UBERON:0000165]

text: saliva [UBERON:0001836]

text: Belgium

text: saliva

characteristic: host body product

text: Acute promyelocytic leukemia

characteristic: host disease status

text: female

characteristic: host sex

characteristic: host subject id

text: human-oral

characteristic: human oral environmental package

text: mimarks-survey

characteristic: investigation type

text: Mucositis grade 3

text: PMID 22515215

characteristic: nucleic acid extraction

text: human oral metagenome

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

characteristic: project name

characteristic: sample storage temperature

text: human oral metagenome

text: Illumina sequencing

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: 2531:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

text: Uchime

characteristic: chimera check

characteristic: collection date

text: Patient_5 Saliva T19

characteristic: description

characteristic: environment (biome)

text: mouth [UBERON:0000165]

characteristic: environment (feature)

text: saliva [UBERON:0001836]

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: saliva

text: Acute promyelocytic leukemia

text: female

text: human-oral

text: mimarks-survey

text: Mucositis grade 3

characteristic: nose/mouth/teeth/throat disorder

text: PMID 22515215

text: human oral metagenome

text: human oral metagenome

text: Illumina sequencing

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: 2532:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

text: GFBIO

text: Uchime

text: Patient_5 Saliva T20

text: mouth [UBERON:0000165]

text: saliva [UBERON:0001836]

text: Belgium

text: saliva

characteristic: host body product

text: Acute promyelocytic leukemia

characteristic: host disease status

text: female

characteristic: host sex

characteristic: host subject id

text: human-oral

characteristic: human oral environmental package

text: mimarks-survey

characteristic: investigation type

text: Mucositis grade 2

text: PMID 22515215

characteristic: nucleic acid extraction

text: human oral metagenome

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

characteristic: project name

characteristic: sample storage temperature

text: human oral metagenome

text: Illumina sequencing

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: 2533:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

text: Uchime

characteristic: chimera check

characteristic: collection date

text: Patient_5 Saliva T22

characteristic: description

characteristic: environment (biome)

text: mouth [UBERON:0000165]

characteristic: environment (feature)

text: saliva [UBERON:0001836]

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: saliva

text: Acute promyelocytic leukemia

text: female

text: human-oral

text: mimarks-survey

text: PMID 22515215

text: human oral metagenome

text: human oral metagenome

text: Illumina sequencing

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: 2534:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

text: GFBIO

text: Uchime

text: Patient_5 Buccal T2

text: anthropogenic terrestrial biome [ENVO:01000219]

text: mouth [UBERON:0000165]

text: mouth mucosa [UBERON:0003729]

text: Belgium

text: Epithelium of mucosa of mouth

characteristic: host body site

text: Acute promyelocytic leukemia

characteristic: host disease status

text: female

characteristic: host sex

characteristic: host subject id

text: human-oral

characteristic: human oral environmental package

text: mimarks-survey

characteristic: investigation type

text: PMID 22515215

characteristic: nucleic acid extraction

text: human oral metagenome

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

characteristic: project name

characteristic: sample storage temperature

text: human oral metagenome

text: Illumina sequencing

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: 2535:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

text: Uchime

characteristic: chimera check

characteristic: collection date

text: Patient_5 Buccal T3

characteristic: description

characteristic: environment (biome)

text: mouth [UBERON:0000165]

characteristic: environment (feature)

text: mouth mucosa [UBERON:0003729]

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: Epithelium of mucosa of mouth

text: Acute promyelocytic leukemia

text: female

text: human-oral

text: mimarks-survey

text: PMID 22515215

text: human oral metagenome

text: initial denaturation:96degC_2min; annealing:96degC_15s; elongation: 50degC_50s; final elongation:70degC_90s

text: human oral metagenome

text: Illumina sequencing

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: 2536:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

text: GFBIO

text: Uchime

text: Patient_5 Buccal T4

text: mouth [UBERON:0000165]

text: mouth mucosa [UBERON:0003729]

text: Belgium

text: Epithelium of mucosa of mouth

characteristic: host body site

text: Acute promyelocytic leukemia

characteristic: host disease status

text: female

characteristic: host sex

characteristic: host subject id

text: human-oral

characteristic: human oral environmental package

text: mimarks-survey

characteristic: investigation type

text: PMID 22515215

characteristic: nucleic acid extraction

text: human oral metagenome

characteristic: organism

characteristic: pcr conditions

text: FWD:NNNNNNNNNTCCTACGGGNGGCWGCAG; REV:NNNNNNNNNNTGACTACHVGGGTATCTAAKCC

characteristic: pcr primers

characteristic: project name

characteristic: sample storage temperature

text: human oral metagenome

text: Illumina sequencing

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: 2537:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

text: Uchime

characteristic: chimera check

characteristic: collection date

text: Patient_5 Buccal T6

characteristic: description

characteristic: environment (biome)

text: mouth [UBERON:0000165]

characteristic: environment (feature)

text: mouth mucosa [UBERON:0003729]

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: Epithelium of mucosa of mouth

text: Acute promyelocytic leukemia

text: female

text: human-oral

text: mimarks-survey

text: Mucositis grade 1

characteristic: nose/mouth/teeth/throat disorder

text: PMID 22515215

text: human oral metagenome

text: human oral metagenome

text: Illumina sequencing

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: 2538:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

text: GFBIO

text: Uchime

text: Patient_5 Buccal T8

text: mouth [UBERON:0000165]

text: mouth mucosa [UBERON:0003729]

text: Belgium

text: Epithelium of mucosa of mouth

characteristic: host body site

text: Acute promyelocytic leukemia

characteristic: host disease status

text: female

characteristic: host sex

characteristic: host subject id

text: human-oral

characteristic: human oral environmental package

text: mimarks-survey

characteristic: investigation type

text: Mucositis grade 1

text: PMID 22515215

characteristic: nucleic acid extraction

text: human oral metagenome

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

characteristic: project name

characteristic: sample storage temperature

text: human oral metagenome

text: Illumina sequencing

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: 2539:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

text: Uchime

characteristic: chimera check

characteristic: collection date

text: Patient_5 Buccal T9

characteristic: description

characteristic: environment (biome)

text: mouth [UBERON:0000165]

characteristic: environment (feature)

text: mouth mucosa [UBERON:0003729]

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: Epithelium of mucosa of mouth

text: Acute promyelocytic leukemia

text: female

text: human-oral

text: mimarks-survey

text: Mucositis grade 2

characteristic: nose/mouth/teeth/throat disorder

text: PMID 22515215

text: human oral metagenome

text: human oral metagenome

text: Illumina sequencing

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: 2540:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

text: GFBIO

text: Uchime

text: Patient_5 Buccal T11

text: mouth [UBERON:0000165]

text: mouth mucosa [UBERON:0003729]

text: Belgium

text: Epithelium of mucosa of mouth

characteristic: host body site

text: Acute promyelocytic leukemia

characteristic: host disease status

text: female

characteristic: host sex

characteristic: host subject id

text: human-oral

characteristic: human oral environmental package

text: mimarks-survey

characteristic: investigation type

text: PMID 22515215

characteristic: nucleic acid extraction

text: human oral metagenome

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

characteristic: project name

characteristic: sample storage temperature

text: human oral metagenome

text: Illumina sequencing

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: 2541:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

text: Uchime

characteristic: chimera check

characteristic: collection date

text: Patient_5 Buccal T13

characteristic: description

characteristic: environment (biome)

text: mouth [UBERON:0000165]

characteristic: environment (feature)

text: mouth mucosa [UBERON:0003729]

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: Epithelium of mucosa of mouth

text: Acute promyelocytic leukemia

text: female

text: human-oral

text: mimarks-survey

text: PMID 22515215

text: human oral metagenome

text: human oral metagenome

text: Illumina sequencing

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: 2542:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

text: GFBIO

text: Uchime

text: Patient_5 Buccal T15

text: mouth [UBERON:0000165]

text: mouth mucosa [UBERON:0003729]

text: Belgium

text: Epithelium of mucosa of mouth

characteristic: host body site

text: Acute promyelocytic leukemia

characteristic: host disease status

text: female

characteristic: host sex

characteristic: host subject id

text: human-oral

characteristic: human oral environmental package

text: mimarks-survey

characteristic: investigation type

text: PMID 22515215

characteristic: nucleic acid extraction

text: human oral metagenome

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

characteristic: project name

characteristic: sample storage temperature

text: human oral metagenome

text: Illumina sequencing

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: 2543:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

text: Uchime

characteristic: chimera check

characteristic: collection date

text: Patient_5 Buccal T17

characteristic: description

characteristic: environment (biome)

text: mouth [UBERON:0000165]

characteristic: environment (feature)

text: mouth mucosa [UBERON:0003729]

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: Epithelium of mucosa of mouth

text: Acute promyelocytic leukemia

text: female

text: human-oral

text: mimarks-survey

text: Mucositis grade 2

characteristic: nose/mouth/teeth/throat disorder

text: PMID 22515215

text: human oral metagenome

text: human oral metagenome

text: Illumina sequencing

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: 2544:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

text: GFBIO

text: Uchime

text: Patient_5 Buccal T18

text: mouth [UBERON:0000165]

text: mouth mucosa [UBERON:0003729]

text: Belgium

text: Epithelium of mucosa of mouth

characteristic: host body site

text: Acute promyelocytic leukemia

characteristic: host disease status

text: female

characteristic: host sex

characteristic: host subject id

text: human-oral

characteristic: human oral environmental package

text: mimarks-survey

characteristic: investigation type

text: Mucositis grade 3

text: PMID 22515215

characteristic: nucleic acid extraction

text: human oral metagenome

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

characteristic: project name

characteristic: sample storage temperature

text: human oral metagenome

text: Illumina sequencing

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: 2545:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

text: Uchime

characteristic: chimera check

characteristic: collection date

text: Patient_5 Buccal T19

characteristic: description

characteristic: environment (biome)

text: mouth [UBERON:0000165]

characteristic: environment (feature)

text: mouth mucosa [UBERON:0003729]

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: Epithelium of mucosa of mouth

text: Acute promyelocytic leukemia

text: female

text: human-oral

text: mimarks-survey

text: Mucositis grade 3

characteristic: nose/mouth/teeth/throat disorder

text: PMID 22515215

text: human oral metagenome

text: human oral metagenome

text: Illumina sequencing

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: 2546:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

text: GFBIO

text: Uchime

text: Patient_5 Buccal T20

text: mouth [UBERON:0000165]

text: mouth mucosa [UBERON:0003729]

text: Belgium

text: Epithelium of mucosa of mouth

characteristic: host body site

text: Acute promyelocytic leukemia

characteristic: host disease status

text: female

characteristic: host sex

characteristic: host subject id

text: human-oral

characteristic: human oral environmental package

text: mimarks-survey

characteristic: investigation type

text: Mucositis grade 2

text: PMID 22515215

characteristic: nucleic acid extraction

text: human oral metagenome

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

characteristic: project name

characteristic: sample storage temperature

text: human oral metagenome

text: Illumina sequencing

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: 2547:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

text: Uchime

characteristic: chimera check

characteristic: collection date

text: Patient_5 Buccal T22

characteristic: description

characteristic: environment (biome)

text: mouth [UBERON:0000165]

characteristic: environment (feature)

text: mouth mucosa [UBERON:0003729]

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: Epithelium of mucosa of mouth

text: Acute promyelocytic leukemia

text: female

text: human-oral

text: mimarks-survey

text: PMID 22515215

text: human oral metagenome

text: human oral metagenome

text: Illumina sequencing

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: 2548:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

text: GFBIO

text: Uchime

text: Patient_5 Lesion T17

text: mouth [UBERON:0000165]

text: mouth mucosa [UBERON:0003729]

text: Belgium

text: Epithelium of mucosa of mouth

characteristic: host body site

text: Acute promyelocytic leukemia

characteristic: host disease status

text: female

characteristic: host sex

characteristic: host subject id

text: human-oral

characteristic: human oral environmental package

text: mimarks-survey

characteristic: investigation type

text: Mucositis grade 2

characteristic: nose/mouth/teeth/throat disorder

text: PMID 22515215

characteristic: nucleic acid extraction

text: human oral metagenome

characteristic: organism

characteristic: pcr conditions

characteristic: pcr primers

characteristic: project name

characteristic: sample storage temperature

text: human oral metagenome

text: Illumina sequencing

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 2549:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

text: Uchime

characteristic: chimera check

characteristic: collection date

text: Patient_5 Lesion T18

characteristic: description

text: anthropogenic terrestrial biome [ENVO:01000219]

characteristic: environment (biome)

text: mouth [UBERON:0000165]

characteristic: environment (feature)

text: mouth mucosa [UBERON:0003729]

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: Epithelium of mucosa of mouth

text: Acute promyelocytic leukemia

text: female

text: human-oral

text: mimarks-survey

text: Mucositis grade 3

text: PMID 22515215

text: human oral metagenome

text: human oral metagenome

text: Illumina sequencing

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: 2550:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

text: GFBIO

text: Uchime

text: Patient_5 Lesion T19

text: mouth [UBERON:0000165]

text: mouth mucosa [UBERON:0003729]

text: Belgium

text: Epithelium of mucosa of mouth

characteristic: host body site

text: Acute promyelocytic leukemia

characteristic: host disease status

text: female

characteristic: host sex

characteristic: host subject id

text: human-oral

characteristic: human oral environmental package

text: mimarks-survey

characteristic: investigation type

text: Mucositis grade 3

characteristic: nose/mouth/teeth/throat disorder

text: PMID 22515215

characteristic: nucleic acid extraction

text: human oral metagenome

characteristic: organism

text: initial denaturation:96degC_2min; annealing:96degC_15s; elongation: 50degC_50s; final elongation:70degC_90s

characteristic: pcr conditions

characteristic: pcr primers

characteristic: project name

characteristic: sample storage temperature

text: human oral metagenome

text: Illumina sequencing

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFBIO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 2551:c9df40ed-d1b8-46cc-abd4-bfd18db285b0

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

text: Uchime

characteristic: chimera check

characteristic: collection date

text: Patient_5 Lesion T20

characteristic: description

characteristic: environment (biome)

text: mouth [UBERON:0000165]

characteristic: environment (feature)

text: mouth mucosa [UBERON:0003729]

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: Epithelium of mucosa of mouth

text: Acute promyelocytic leukemia

text: female

text: human-oral

text: mimarks-survey

text: Mucositis grade 2

text: PMID 22515215

text: human oral metagenome

text: FWD:NNNNNNNNNTCCTACGGGNGGCWGCAG; REV:NNNNNNNNNNTGACTACHVGGGTATCTAAKCC

text: human oral metagenome

text: Illumina sequencing

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF ZURICH

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:UNIVERSITY OF ZURICH

text: house mouse

characteristic: common name

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Nerve-associated cells isolated from non-wounded skin Sample_1


text: UNIVERSITY OF ZURICH

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: house mouse

text: Mus musculus

text: Mus musculus

text: Nerve-associated cells isolated from non-wounded skin Sample_2


text: UNIVERSITY OF ZURICH

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: Nerve-associated cells isolated from non-wounded skin Sample_3


text: UNIVERSITY OF ZURICH

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: Nerve-associated cells isolated from the wound Sample_1


text: UNIVERSITY OF ZURICH

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: Nerve-associated cells isolated from the wound Sample_2


text: UNIVERSITY OF ZURICH

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

text: Nerve-associated cells isolated from the wound Sample_3


text: Yersinia pestis

characteristic: ArrayExpress-SPECIES

text: SC

text: public

characteristic: anonymized name

characteristic: collection date

text: Yersinia pestis

characteristic: culture collection

text: not available: to be reported later

characteristic: host status

text: not available: to be reported later

characteristic: isolation source

text: Yersinia pestis

text: Yersinia pestis

text: not available: to be reported later

characteristic: serovar

text: not available: to be reported later

characteristic: specific host

characteristic: strain

characteristic: subject id


text: Shigella sonnei

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Shigella sonnei

text: not available: to be reported later

text: not available: to be reported later

text: Shigella sonnei

text: Shigella sonnei

text: not available: to be reported later

text: not available: to be reported later

characteristic: title


text: Salmonella enterica subsp. enterica serovar Paratyphi A

characteristic: ArrayExpress-SPECIES

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: common name

text: Variant of NCTC 2904

characteristic: organism

text: not available: to be reported later

text: environmental


text: Shigella dysenteriae

text: SC

text: public

characteristic: anonymized name

characteristic: collection date

text: Shigella dysenteriae

text: United Kingdom: Newcastle

characteristic: country

characteristic: culture collection

text: not available: to be reported later

characteristic: host status

text: not available: to be reported later

characteristic: isolation source

text: Shigella dysenteriae

text: Shigella dysenteriae

text: not available: to be reported later

characteristic: serovar

text: Human

characteristic: specific host


text: Shigella boydii

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Shigella boydii

text: not available: to be reported later

text: not available: to be reported later

text: Shigella boydii

text: Shigella boydii

text: not available: to be reported later

text: not available: to be reported later

characteristic: strain

characteristic: subject id


text: Salmonella enterica subsp. enterica serovar Typhi

characteristic: ArrayExpress-SPECIES

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: common name

text: not available: to be reported later

text: not available: to be reported later

characteristic: organism

text: not available: to be reported later

text: not available: to be reported later

characteristic: title


text: Salmonella enterica subsp. enterica serovar Choleraesuis

text: SC

text: public

characteristic: anonymized name

characteristic: collection date

characteristic: culture collection

text: not available: to be reported later

characteristic: host status

text: not available: to be reported later

characteristic: isolation source

text: not available: to be reported later

characteristic: serovar

text: not available: to be reported later

characteristic: specific host


text: Odoribacter splanchnicus

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Odoribacter splanchnicus

text: not available: to be reported later

text: Faeces

text: Odoribacter splanchnicus

text: Odoribacter splanchnicus

text: not available: to be reported later

text: not available: to be reported later

characteristic: strain


text: Pseudomonas stutzeri

characteristic: ArrayExpress-SPECIES

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Pseudomonas stutzeri

characteristic: common name

text: not available: to be reported later

text: not available: to be reported later

text: Pseudomonas stutzeri

text: Pseudomonas stutzeri

text: not available: to be reported later

text: not available: to be reported later

characteristic: subject id


text: SC

text: public

characteristic: collection date

text: Bacteroides heparinolyticus

characteristic: culture collection

text: not available

characteristic: host status

text: not available

characteristic: isolation source

text: Bacteroides heparinolyticus

characteristic: organism

text: Bacteroides heparinolyticus

text: not available

text: not available

characteristic: title


text: Clostridium novyi

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

characteristic: anonymized name

text: Clostridium novyi

text: not available: to be reported later

text: not available: to be reported later

text: Clostridium novyi

text: Clostridium novyi

text: not available: to be reported later

characteristic: serovar

text: not available: to be reported later

characteristic: specific host


text: Grimontia hollisae

characteristic: ArrayExpress-SPECIES

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Grimontia hollisae

text: USA: Louisiana (State)

characteristic: country

text: not available: to be reported later

text: Stool

text: Grimontia hollisae

text: Grimontia hollisae

text: not available: to be reported later

text: Human

characteristic: strain


text: Porphyromonas cangingivalis

text: SC

text: public

characteristic: Submitter Id

characteristic: collection date

text: Porphyromonas cangingivalis

characteristic: common name

text: Finland: Helsinki

characteristic: culture collection

text: not available: to be reported later

characteristic: host status

text: Periodontal pocket

characteristic: isolation source

text: Porphyromonas cangingivalis

characteristic: organism

text: Porphyromonas cangingivalis

text: not available: to be reported later

text: Dog

characteristic: subject id


text: Bartonella doshiae

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

characteristic: anonymized name

text: Bartonella doshiae

text: disease

text: Blood

text: Bartonella doshiae

text: Bartonella doshiae

text: not available: to be reported later

characteristic: serovar

text: Field vole

characteristic: specific host

characteristic: title


text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Brevibacterium casei

text: not available

text: not available

text: Brevibacterium casei

text: Brevibacterium casei

text: not available

text: not available

characteristic: strain


text: Lysinibacillus sphaericus

characteristic: ArrayExpress-SPECIES

text: SC

text: public

characteristic: Submitter Id

characteristic: collection date

text: Lysinibacillus sphaericus

characteristic: common name

text: United Kingdom: Southampton

characteristic: country

characteristic: culture collection

text: Lysinibacillus sphaericus

text: Lysinibacillus sphaericus

text: Human


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CHU Clermont-ferrand

text: public

tag: Namespace:CHU Clermont-ferrand

text: France

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Enterobacter cloacae complex ECC45 ST873

characteristic: isolate

text: Lyon

characteristic: isolation source

text: Enterobacter cloacae complex bacterium

characteristic: organism

text: Enterobacter cloacae complex bacterium


text: CHU Clermont-ferrand

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: France

text: diseased

text: Homo sapiens

text: Enterobacter cloacae complex ECC46 ST873

text: Lyon

text: Enterobacter cloacae complex bacterium

text: Enterobacter cloacae complex bacterium

characteristic: title


text: CHU Clermont-ferrand

text: public

characteristic: Submitter Id

characteristic: collection date

text: France

text: diseased

text: Homo sapiens

text: Enterobacter cloacae complex ECC48 ST873

text: Lyon

text: Enterobacter cloacae complex bacterium

text: Enterobacter cloacae complex bacterium


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: CHU Clermont-ferrand

text: public

text: France

text: diseased

text: human

text: Enterobacter cloacae complex 'Hoffmann cluster III' ECC308

text: Lyon


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CHU Clermont-ferrand

text: public

text: France

text: diseased

text: Homo sapiens

text: Enterobacter hormaechei subsp. steigerwaltii ECC309

text: Lyon


text: CHU Clermont-ferrand

text: public

text: France

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: Homo sapiens

text: Enterobacter cloacae complex ECC310 ST873

text: Lyon

text: Enterobacter cloacae complex bacterium

text: Enterobacter cloacae complex bacterium


text: UTRECHT UNIVERSITY

text: public

tag: Namespace:UTRECHT UNIVERSITY

unit: L

characteristic: amount or size of sample collected

text: Azolla leaf juice biological replicate 1

characteristic: description

text: Urban

characteristic: environment (biome)

text: Water surface

characteristic: environment (feature)

text: leaf juice of 5g whole plantlets, briefly washed. Leaf juice was extracted via squashing in a pasta machine. Orr J, Haselkorn R. 1982. Regulation of glutamine synthetase activity and synthesis in free-living and symbiotic Anabaena spp. J Bacteriol 152: 626-635.

characteristic: environment (material)

text: Netherlands

unit: m

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Ditch near the street Laan van Maarschalkerweerd in Utrecht, The Netherlands.

characteristic: geographic location (region and locality)

text: metagenome

characteristic: investigation type

text: Azolla filiculoides

text: plant-associated

characteristic: plant-associated environmental package

text: The Azolla metagenome

characteristic: project name

text: Fish net

characteristic: sample collection device or method

text: stored in individual boxes of .5 Liters

characteristic: sample material processing

characteristic: sample storage temperature

text: Azolla filiculoides

text: illumina short reads

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UTRECHT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Azolla leaf juice biological replicate 2

text: Urban

text: Water surface

text: Netherlands

characteristic: geographic location (country and/or sea)

text: metagenome

text: Azolla filiculoides

characteristic: organism

text: plant-associated

text: The Azolla metagenome

text: Fish net

text: stored in individual boxes of .5 Liters

text: Azolla filiculoides

text: illumina short reads

characteristic: title


text: UTRECHT UNIVERSITY

text: public

characteristic: amount or size of sample collected

text: Azolla leaf juice biological replicate 3

characteristic: description

text: Urban

characteristic: environment (biome)

text: Water surface

characteristic: environment (feature)

characteristic: environment (material)

text: Netherlands

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: metagenome

characteristic: investigation type

text: Azolla filiculoides

text: plant-associated

characteristic: plant-associated environmental package

text: The Azolla metagenome

characteristic: project name

text: Fish net

characteristic: sample collection device or method

text: stored in individual boxes of .5 Liters

characteristic: sample material processing

text: Azolla filiculoides

text: illumina short reads


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Quadram Institute Bioscience

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Quadram Institute Bioscience

characteristic: Submitter Id

characteristic: collection date

text: Clostridium tertium isolated from preterm infant faecal sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Home sapiens

characteristic: host scientific name

text: Clostridium tertium

characteristic: isolate

text: Preterm infant faecal sample

characteristic: isolation source

text: Clostridium tertium

text: Clostridium tertium

text: Clostridium tertium LH009


text: Plasmodium falciparum

characteristic: ArrayExpress-Species

text: SC

text: public

text: malaria parasite P. falciparum

characteristic: common name

text: Plasmodium falciparum

characteristic: organism

text: Plasmodium falciparum

text: Clinical Isolate INV020

characteristic: title


text: Plasmodium falciparum

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: malaria parasite P. falciparum

text: Plasmodium falciparum

text: Plasmodium falciparum

text: Clinical Isolate INV027


text: Plasmodium falciparum

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: malaria parasite P. falciparum

text: Plasmodium falciparum

text: Plasmodium falciparum

text: Clinical Isolate INV055


text: Plasmodium falciparum

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: malaria parasite P. falciparum

text: Plasmodium falciparum

text: Plasmodium falciparum

text: Clinical Isolate INV056


text: Plasmodium falciparum

text: SC

text: public

characteristic: Submitter Id

text: malaria parasite P. falciparum

text: Plasmodium falciparum

text: Plasmodium falciparum

text: Ckinical Isolate INV018


text: Plasmodium falciparum

text: SC

text: public

text: malaria parasite P. falciparum

text: Plasmodium falciparum

text: Plasmodium falciparum

text: Clinical Isolate INV032


text: Plasmodium falciparum

text: SC

text: public

text: malaria parasite P. falciparum

text: Plasmodium falciparum

text: Plasmodium falciparum

text: Clinical Isolate INV051


text: Plasmodium falciparum

text: SC

text: public

text: malaria parasite P. falciparum

text: Plasmodium falciparum

text: Plasmodium falciparum

text: Clinical Isolate INV054


text: Plasmodium falciparum

text: SC

text: public

text: malaria parasite P. falciparum

text: Plasmodium falciparum

text: Plasmodium falciparum

text: Clinical Isolate INV060


text: UNIVERSITY COLLEGE LONDON

text: public

tag: Namespace:UNIVERSITY COLLEGE LONDON

text: Jun Zhang

characteristic: collected by

characteristic: collection date

text: CCTCC AB2013039

characteristic: culture collection

text: China

characteristic: geographic location (country and/or sea)

text: Qiyang city, Hunan province

characteristic: geographic location (region and locality)

text: Jun Zhang

characteristic: identified by

text: paddy soil contaminated with arsenic due to geogenic reasons

text: Rhizobium sp. Q54

text: Rhizobium sp. Q54

characteristic: strain

text: Rhizobium endolythicum strain Q54


characteristic: ENA-CHECKLIST

text: UNIVERSITY COLLEGE LONDON

text: public

text: Joanne M Santini

text: Motile and facultative chemolithotrophic bacterium isolated from rock, oxidizes arsenite and thiosulfuate

characteristic: description

text: Australia

text: Northern Teritory

text: Joanne M Santini

text: moist arsenopyrite (FeAsS)-containing rock taken from a mine tunnel approximately 300 m below the ground in the Granites gold mine

characteristic: isolation source

text: -20.5385, 130.310528

characteristic: lat lon

text: arsenite-oxidising bacterium NT-25

characteristic: organism

characteristic: pubmed id

text: arsenite-oxidising bacterium NT-25

text: Rhizobium sp. strain NT-25

characteristic: title


RTCK

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY COLLEGE LONDON

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: RTCK

text: Pradosh Roy, Department of Microbioliogy, Bose Institute, Kolkata-700 054, India

text: DSM 13828

text: sulfur chemolithotroph isolated from soil

text: India

text: West Bengal

text: Erko Stackebrandt, DSMZ, D-38124 Braunschweig, Germany

text: soil

text: Rhizobium sp. TCK

text: Rhizobium sp. TCK

text: TCK

text: Rhizobium sp. strain TCK


text: UNIVERSITY COLLEGE LONDON

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Jun Zhang

characteristic: collected by

characteristic: collection date

text: KACC 17222 T; CCTCC AB2013042 T; DSM 102134

characteristic: culture collection

text: Triazophos-degrading bacterium isolated from soil

text: China

characteristic: geographic location (country and/or sea)

text: Yangzhou city, Jiangsu province

characteristic: geographic location (region and locality)

text: Jun Zhang

text: Paddy soil under the long-term application of triazophos insecticide

text: Resulting EMBL record should be merged with Genbank/RefSeq accession NZ_MUXO00000000

characteristic: note

text: Rhizobium flavum

text: Rhizobium flavum

text: Rhizobium flavum strain YW14


RKHAN

characteristic: ENA-CHECKLIST

text: UNIVERSITY COLLEGE LONDON

text: public

text: RKHAN

text: Seyed Mohammad Mehdi Dastgheib, Microbiology and Biotechnology Research Group, Research Institute of Petroleum Industries, Olympic Village, Tehran, Iran, post code 1485733111

text: hydrocarbon-utilizing bacterium isolated from a soil contaminated by drilling fluids

characteristic: description

text: Iran

text: Khangiran Rural District, Central District of Sarakhs County, Razavi Khorasan Province

text: Seyed Mohammad Mehdi Dastgheib

characteristic: identified by

text: contaminated soil sample obtained from a drilling mud pit

characteristic: isolation source

text: 36.55555556, 60.79916667

characteristic: lat lon

text: Rhizobium sp. Khangiran2

characteristic: organism

text: Rhizobium sp. Khangiran2

characteristic: strain

text: Rhizobium sp. strain Khangiran2


text: Acinetobacter baumannii

characteristic: ArrayExpress-SPECIES

text: Acinetobacter baumannii

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: anonymized name

text: Acinetobacter baumannii

characteristic: common name

text: Thailand

characteristic: country

text: not available

characteristic: host status

text: not available

text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: not available

characteristic: serovar

text: Human

characteristic: specific host

characteristic: subject id

characteristic: title


text: Acinetobacter baumannii

text: Acinetobacter baumannii

characteristic: ENA-CHECKLIST

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Acinetobacter baumannii

text: Thailand

text: not available

text: not available

characteristic: isolation source

text: Acinetobacter baumannii

characteristic: organism

text: Acinetobacter baumannii

text: not available

text: Human

text: NPRC AB32


text: Acinetobacter baumannii

characteristic: ArrayExpress-SPECIES

text: Acinetobacter baumannii

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Acinetobacter baumannii

text: Thailand

text: not available

text: not available

text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: not available

text: Human

characteristic: strain

text: NPRC AB3


text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: SC

characteristic: INSDC last update

text: public

characteristic: anonymized name

text: Acinetobacter baumannii

characteristic: common name

text: Thailand

characteristic: country

text: not available

characteristic: host status

text: not available

text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: not available

characteristic: serovar

text: Human

characteristic: specific host

text: NPRC AB5


text: Acinetobacter baumannii

text: Acinetobacter baumannii

characteristic: ENA-CHECKLIST

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Acinetobacter baumannii

text: Thailand

text: not available

text: not available

text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: not available

text: Human

characteristic: subject id

text: NPRC AB24

characteristic: title


text: Acinetobacter baumannii

characteristic: ArrayExpress-SPECIES

text: Acinetobacter baumannii

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: Acinetobacter baumannii

text: Thailand

text: not available

text: not available

characteristic: isolation source

text: Acinetobacter baumannii

characteristic: organism

text: Acinetobacter baumannii

text: not available

text: Human

text: NPRC AB2


text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: anonymized name

text: Acinetobacter baumannii

characteristic: common name

text: Thailand

characteristic: country

text: not available

characteristic: host status

text: not available

text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: not available

text: Human

characteristic: strain

text: NPRC AB4


text: Acinetobacter baumannii

text: Acinetobacter baumannii

characteristic: ENA-CHECKLIST

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Acinetobacter baumannii

text: Thailand

text: not available

text: not available

text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: not available

characteristic: serovar

text: Human

characteristic: specific host

text: NPRC AB14


text: Acinetobacter baumannii

characteristic: ArrayExpress-SPECIES

text: Acinetobacter baumannii

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: Acinetobacter baumannii

text: Thailand

text: not available

text: not available

text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: not available

text: Human

characteristic: subject id

text: NPRC AB28

characteristic: title


text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: anonymized name

text: Acinetobacter baumannii

characteristic: common name

text: Thailand

characteristic: country

text: not available

text: not available

characteristic: isolation source

text: Acinetobacter baumannii

characteristic: organism

text: Acinetobacter baumannii

text: not available

text: Human

text: NPRC AB7


text: Acinetobacter baumannii

text: Acinetobacter baumannii

characteristic: ENA-CHECKLIST

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Acinetobacter baumannii

text: Thailand

text: not available

characteristic: host status

text: not available

text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: not available

text: Human

characteristic: strain

text: NPRC AB10


text: Acinetobacter baumannii

characteristic: ArrayExpress-SPECIES

text: Acinetobacter baumannii

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: Acinetobacter baumannii

text: Thailand

text: not available

text: not available

text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: not available

characteristic: serovar

text: Human

characteristic: specific host

text: NPRC AB11


text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: anonymized name

text: Acinetobacter baumannii

characteristic: common name

text: Thailand

characteristic: country

text: not available

text: not available

text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: not available

text: Human

characteristic: subject id

text: NPRC AB13

characteristic: title


text: Acinetobacter baumannii

text: Acinetobacter baumannii

characteristic: ENA-CHECKLIST

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Acinetobacter baumannii

text: Thailand

text: not available

text: not available

characteristic: isolation source

text: Acinetobacter baumannii

characteristic: organism

text: Acinetobacter baumannii

text: not available

text: Human

text: NPRC AB15


text: Acinetobacter baumannii

characteristic: ArrayExpress-SPECIES

text: Acinetobacter baumannii

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: Acinetobacter baumannii

text: Thailand

text: not available

characteristic: host status

text: not available

text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: not available

text: Human

characteristic: strain

text: NPRC AB17


text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: anonymized name

text: Acinetobacter baumannii

characteristic: common name

text: Thailand

characteristic: country

text: not available

text: not available

text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: not available

characteristic: serovar

text: Human

characteristic: specific host

text: NPRC AB18


text: Acinetobacter baumannii

text: Acinetobacter baumannii

characteristic: ENA-CHECKLIST

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Acinetobacter baumannii

text: Thailand

text: not available

text: not available

text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: not available

text: Human

characteristic: subject id

text: NPRC AB19

characteristic: title


text: Acinetobacter baumannii

characteristic: ArrayExpress-SPECIES

text: Acinetobacter baumannii

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: Acinetobacter baumannii

text: Thailand

text: not available

text: not available

characteristic: isolation source

text: Acinetobacter baumannii

characteristic: organism

text: Acinetobacter baumannii

text: not available

text: Human

text: NPRC AB20


text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: anonymized name

text: Acinetobacter baumannii

characteristic: common name

text: Thailand

characteristic: country

text: not available

characteristic: host status

text: not available

text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: not available

text: Human

characteristic: strain

text: NPRC AB22


text: Acinetobacter baumannii

text: Acinetobacter baumannii

characteristic: ENA-CHECKLIST

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Acinetobacter baumannii

text: Thailand

text: not available

text: not available

text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: not available

characteristic: serovar

text: Human

characteristic: specific host

text: NPRC AB26


text: Acinetobacter baumannii

characteristic: ArrayExpress-SPECIES

text: Acinetobacter baumannii

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: Acinetobacter baumannii

text: Thailand

text: not available

text: not available

text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: not available

text: Human

characteristic: subject id

text: NPRC AB30

characteristic: title


text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: anonymized name

text: Acinetobacter baumannii

characteristic: common name

text: Thailand

characteristic: country

text: not available

text: not available

characteristic: isolation source

text: Acinetobacter baumannii

characteristic: organism

text: Acinetobacter baumannii

text: not available

text: Human

text: NPRC AB33


text: Acinetobacter baumannii

text: Acinetobacter baumannii

characteristic: ENA-CHECKLIST

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Acinetobacter baumannii

text: Thailand

text: not available

characteristic: host status

text: not available

text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: not available

text: Human

characteristic: strain

text: NPRC AB34


text: Acinetobacter baumannii

characteristic: ArrayExpress-SPECIES

text: Acinetobacter baumannii

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: Acinetobacter baumannii

text: Thailand

text: not available

text: not available

text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: not available

characteristic: serovar

text: Human

characteristic: specific host

text: NPRC AB36


text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: anonymized name

text: Klebsiella pneumoniae

characteristic: common name

text: Thailand

characteristic: country

text: not available

text: not available

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

text: not available

text: Human

characteristic: subject id

characteristic: title


Enterobacter ECC45

characteristic: ENA-CHECKLIST

text: CHU Clermont-ferrand

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Enterobacter ECC45

characteristic: Submitter Id

characteristic: collection date

text: Enterobacter cloacae complex ECC45 ST873 isolated in France

characteristic: description

text: France

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

characteristic: isolate

text: Lyon

characteristic: isolation source

text: Enterobacter cloacae complex bacterium

characteristic: organism

text: Enterobacter cloacae complex bacterium


Enterobacter ECC309

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CHU Clermont-ferrand

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Enterobacter ECC309

text: Enterobacter hormaechei subsp. steigerwaltii ECC309

text: France

text: diseased

text: homo sapiens

text: Lyon


Enterobacter ECC47

characteristic: ENA-CHECKLIST

text: CHU Clermont-ferrand

text: public

characteristic: INSDC status

text: Enterobacter ECC47

text: Enterobacter cloacae complex producing VIM-4 isolated in France

text: France

text: diseased

text: homo sapiens

text: Enterobacter cloacae complex cloacae complex 'Hoffmann cluster III' ECC47

text: Lyon

text: Enterobacter cloacae complex 'Hoffmann cluster III'

characteristic: title


BARAN1 chromosome

text: AALBORG UNIVERSITY

text: public

characteristic: SRA accession

text: BARAN1 chromosome

tag: Namespace:AALBORG UNIVERSITY

characteristic: Submitter Id

characteristic: collection date

text: This is a complete genome of a novel species belonging to the candidate phylum Acetothemria. The species is named: Bipolaricaulis anaerobia Ran1. The genome was constructed from metagenomes,produced from sequencing biomass samples from anaerobic sludge digester.

text: Anaerobic digester microbiome

characteristic: environment (biome)

text: mesophilic sludge digester

characteristic: environment (feature)

text: Anaerobic digester biomass

characteristic: environment (material)

text: Denmark

text: 56.4697 N

characteristic: geographic location (latitude)

text: 10.0373 E

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: Candidatus Acetothermia bacterium Ran1

text: Normigas

characteristic: project name

text: Candidatus Acetothermia bacterium Ran1

text: Illumina and nanopore

characteristic: sequencing method

text: Bipolaricaulis anaerobia Ran1

text: wastewater/sludge

characteristic: wastewater/sludge environmental package


text: Mouse

characteristic: ArrayExpress-Phenotype

text: Mus musculus

characteristic: ArrayExpress-Species

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: house mouse

characteristic: common name

text: Mus musculus

characteristic: organism

characteristic: sample description

text: Mus musculus


text: Neisseria meningitidis

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

characteristic: collection date

text: Neisseria meningitidis

characteristic: culture collection

text: disease

characteristic: host status

text: Cerebrospinal fluid

characteristic: isolation source

text: Neisseria meningitidis

text: Neisseria meningitidis

text: not available: to be reported later

characteristic: serovar

text: Human (1yr old girl)

characteristic: specific host

characteristic: strain

characteristic: subject id

characteristic: title


text: Neisseria meningitidis

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Neisseria meningitidis

characteristic: common name

text: not available: to be reported later

text: not available: to be reported later

text: Neisseria meningitidis

characteristic: organism

text: Neisseria meningitidis

text: not available: to be reported later

text: not available: to be reported later


text: Neisseria meningitidis

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Neisseria meningitidis

text: USA: Chicago

characteristic: country

text: not available: to be reported later

text: not available: to be reported later

text: Neisseria meningitidis

text: Neisseria meningitidis

text: not available: to be reported later

text: not available: to be reported later