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RNA-Seq

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tag: Namespace:Korea Advanced Institute of Science and technology

text: Elucidation of Akkermansia muciniphila probiotic traits driven by mucin depletion

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characteristic: SRA accession

characteristic: Submitter Id

text: H2AD reactor H2=50%, COD5

text: anaerobic bioreactor

text: anaerobic sludge

text: anaerobic digester sludge

text: United Kingdom

text: metagenome

text: metagenome

text: H2AD in-situ

text: metagenome

text: pyrosequencing


text: YORK UNIVERSITY

text: public

characteristic: collection date

text: H2AD reactor H2=75%, COD5

characteristic: description

text: anaerobic bioreactor

characteristic: environment (biome)

text: anaerobic sludge

characteristic: environment (feature)

text: anaerobic digester sludge

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: metagenome

text: metagenome

characteristic: organism

text: H2AD in-situ

text: metagenome

text: pyrosequencing

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: YORK UNIVERSITY

text: public

text: H2AD reactor H2=95%, COD5

text: anaerobic bioreactor

text: anaerobic sludge

text: anaerobic digester sludge

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

characteristic: miscellaneous environmental package

text: metagenome

text: H2AD in-situ

characteristic: project name

text: metagenome

text: pyrosequencing

characteristic: sequencing method


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: YORK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: H2AD reactor H2=0%, COD4

text: anaerobic bioreactor

text: anaerobic sludge

text: anaerobic digester sludge

text: United Kingdom

text: metagenome

text: metagenome

text: H2AD in-situ

text: metagenome

text: pyrosequencing


text: YORK UNIVERSITY

text: public

characteristic: collection date

text: H2AD reactor H2=10%, COD4

characteristic: description

text: anaerobic bioreactor

characteristic: environment (biome)

text: anaerobic sludge

characteristic: environment (feature)

text: anaerobic digester sludge

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: metagenome

text: metagenome

characteristic: organism

text: H2AD in-situ

text: metagenome

text: pyrosequencing

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: YORK UNIVERSITY

text: public

text: H2AD reactor H2=20%, COD4

text: anaerobic bioreactor

text: anaerobic sludge

text: anaerobic digester sludge

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

characteristic: miscellaneous environmental package

text: metagenome

text: H2AD in-situ

characteristic: project name

text: metagenome

text: pyrosequencing

characteristic: sequencing method


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: YORK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: H2AD reactor H2=30%, COD4

text: anaerobic bioreactor

text: anaerobic sludge

text: anaerobic digester sludge

text: United Kingdom

text: metagenome

text: metagenome

text: H2AD in-situ

text: metagenome

text: pyrosequencing


text: YORK UNIVERSITY

text: public

characteristic: collection date

text: H2AD reactor H2=50%, COD4

characteristic: description

text: anaerobic bioreactor

characteristic: environment (biome)

text: anaerobic sludge

characteristic: environment (feature)

text: anaerobic digester sludge

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: metagenome

text: metagenome

characteristic: organism

text: H2AD in-situ

text: metagenome

text: pyrosequencing

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: YORK UNIVERSITY

text: public

text: H2AD reactor H2=75%, COD4

text: anaerobic bioreactor

text: anaerobic sludge

text: anaerobic digester sludge

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

characteristic: miscellaneous environmental package

text: metagenome

text: H2AD in-situ

characteristic: project name

text: metagenome

text: pyrosequencing

characteristic: sequencing method


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: YORK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: H2AD reactor H2=95%, COD4

text: anaerobic bioreactor

text: anaerobic sludge

text: anaerobic digester sludge

text: United Kingdom

text: metagenome

text: metagenome

text: H2AD in-situ

text: metagenome

text: pyrosequencing


text: Homo sapiens

characteristic: ArrayExpress-SPECIES

text: SC

text: public

text: human

characteristic: common name

text: Homo sapiens

characteristic: organism

text: Homo sapiens

characteristic: subject id

characteristic: title


E-MTAB-7108:H3K27ac ChIP-seq 0h

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: FAU Erlangen-Nurnberg Dept. Genetics

text: public

text: E-MTAB-7108:H3K27ac ChIP-seq 0h

tag: Namespace:FAU Erlangen-Nurnberg Dept. Genetics

text: 3 to 6

unit: month

characteristic: age

text: ArrayExpress

characteristic: broker name

text: hematopoietic multipotent progenitor cell

characteristic: cell type

text: house mouse

text: Protocols: ChIP precipitates were collected either from murine primary bone marrow cells transformed by Hoxa9 and derivatives thereof or from human AML cell line MV4;11 by standard ChIP techniques. Modifications are described in the accompanying publication. In short all samples were crosslinked with formaldehyde or formaldehyde + EGS (sample 3). Antibodies used for ChIP: anti-H3K27-Ac, anti-H3K4-1Me, anti-HOXA9, anti-HA, anti-FLAG, anti-IgG (control) Cells were lysed in standard SDS ChIP lysis buffer, except for sample 1 where SDS replaced by deoxy-cholate + N-lauroylsarcosine. Standard precipitation/wash procedures were used. Library construction was done with NEB Next Ultra II DNA library prep kit including size selection as recommended by the manufacturer.

characteristic: description

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: bone marrow

characteristic: organism part

text: tamoxifen-inducible overexpression of Hoxa9

characteristic: phenotype

text: Mus musculus

text: female

characteristic: sex

characteristic: strain

text: H3K27ac ChIP-seq 0h


E-MTAB-7108:H3K27ac ChIP-seq 72h

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: FAU Erlangen-Nurnberg Dept. Genetics

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-7108:H3K27ac ChIP-seq 72h

characteristic: Submitter Id

text: 3 to 6

text: ArrayExpress

text: house mouse

text: Mus musculus

text: Mus musculus

text: bone marrow

text: Mus musculus

text: female

text: H3K27ac ChIP-seq 72h


E-MTAB-7108:H3K4me ChIP-seq 0h

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: FAU Erlangen-Nurnberg Dept. Genetics

text: public

text: E-MTAB-7108:H3K4me ChIP-seq 0h

text: 3 to 6

characteristic: age

text: ArrayExpress

text: house mouse

characteristic: common name

text: Mus musculus

characteristic: organism

text: Mus musculus

text: bone marrow

text: Mus musculus

text: female

text: H3K4me ChIP-seq 0h

characteristic: title


E-MTAB-7108:H3K4me ChIP-seq 72h

text: FAU Erlangen-Nurnberg Dept. Genetics

text: public

text: E-MTAB-7108:H3K4me ChIP-seq 72h

text: 3 to 6

text: ArrayExpress

characteristic: broker name

characteristic: cell type

text: house mouse

characteristic: description

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: bone marrow

characteristic: organism part

characteristic: phenotype

text: Mus musculus

text: female

text: H3K4me ChIP-seq 72h


E-MTAB-7108:HOXA9 ChIP-seq, anti-HOXA9

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: FAU Erlangen-Nurnberg Dept. Genetics

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-7108:HOXA9 ChIP-seq, anti-HOXA9

unit: year

text: ArrayExpress

characteristic: cell line

text: macrophage

text: human

text: childhood acute monocytic leukemia

characteristic: disease

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

characteristic: sex

text: HOXA9 ChIP-seq, anti-HOXA9


name: E-MTAB-7108:Hoxa9 ChIP-seq, replicate III, anti-HA

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: FAU Erlangen-Nurnberg Dept. Genetics

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 3 to 6

characteristic: age

text: ArrayExpress

text: house mouse

text: Elane/Prtn3/Ctsg triple knockout; Hoxa9-HA

text: Mus musculus

text: Mus musculus

text: bone marrow

text: Hoxa9-HA overexpression

text: Mus musculus

text: female

characteristic: strain

text: Hoxa9 ChIP-seq, replicate III, anti-HA


name: E-MTAB-7108:Hoxa9 ChIP-seq, replicate IV, anti-flag4

text: FAU Erlangen-Nurnberg Dept. Genetics

text: public

text: 3 to 6

text: ArrayExpress

characteristic: broker name

characteristic: cell type

text: house mouse

characteristic: common name

characteristic: description

text: Elane/Prtn3/Ctsg triple knockout; Hoxa9-FLAG

characteristic: genotype

text: Mus musculus

characteristic: organism

text: Mus musculus

text: bone marrow

characteristic: organism part

text: Hoxa9-FLAG overexpression

text: Mus musculus

text: female

characteristic: title


name: E-MTAB-7108:Hoxa9 ChIP-seq,replicate I, anti-HA

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: FAU Erlangen-Nurnberg Dept. Genetics

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: 3 to 6

text: ArrayExpress

text: house mouse

text: Mus musculus

text: Mus musculus

text: bone marrow

text: Hoxa9-HA overexpression

characteristic: phenotype

text: Mus musculus

text: female

characteristic: sex

text: Hoxa9 ChIP-seq,replicate I, anti-HA


name: E-MTAB-7108:Hoxa9 ChIP-seq,replicate II, anti-HA

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: FAU Erlangen-Nurnberg Dept. Genetics

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 3 to 6

text: ArrayExpress

text: house mouse

text: Mus musculus

text: Mus musculus

text: bone marrow

text: Hoxa9-HA overexpression

text: Mus musculus

text: female

text: Hoxa9 ChIP-seq,replicate II, anti-HA


E-MTAB-7108:IgG neg control

text: FAU Erlangen-Nurnberg Dept. Genetics

text: public

text: E-MTAB-7108:IgG neg control

text: 3 to 6

characteristic: age

text: ArrayExpress

characteristic: broker name

characteristic: cell type

text: house mouse

characteristic: common name

characteristic: description

text: Mus musculus

text: Mus musculus

text: bone marrow

text: Hoxa9-FLAG overexpression

text: Mus musculus

text: female

characteristic: strain

text: IgG neg control


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UH/IB

text: public

characteristic: collection date

text: terrestrial biome

characteristic: environment (biome)

text: human-associated habitat

characteristic: environment (feature)

text: stool

characteristic: environment (material)

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: stool

characteristic: host body product

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

characteristic: organism

text: no

characteristic: parkinson

text: Forward: CCTACGGGNGGCWGCAG, GTCCTACGGGNGGCWGCAG, AGAGCCTACGGGNGGCWGCAG, TAGTGTCCTACGGGNGGCWGCAG; Reverse: GACTACHVGGGTATCTAATCC, AGACTACHVGGGTATCTAATCC, TCTGACTACHVGGGTATCTAATCC, CTGAGTGGACTACHVGGGTATCTAATCC

characteristic: pcr primers

text: Parkinson's Disease Microbiome

characteristic: project name

text: human gut metagenome

text: Illumina MiSeq

characteristic: sequencing method

characteristic: target gene

characteristic: target subfragment

text: baseline

characteristic: timepoint

text: C0001 baseline

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UH/IB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: terrestrial biome

characteristic: environment (biome)

text: human-associated habitat

characteristic: environment (feature)

text: stool

characteristic: environment (material)

text: Finland

text: stool

text: human-gut

text: metagenome

text: human gut metagenome

text: no

text: Parkinson's Disease Microbiome

text: human gut metagenome

text: Illumina MiSeq

text: baseline

text: C0005 baseline


text: UH/IB

text: public

text: terrestrial biome

text: human-associated habitat

text: stool

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: stool

characteristic: host body product

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

characteristic: organism

text: no

characteristic: parkinson

characteristic: pcr primers

text: Parkinson's Disease Microbiome

characteristic: project name

text: human gut metagenome

text: Illumina MiSeq

characteristic: sequencing method

characteristic: target gene

characteristic: target subfragment

text: baseline

text: C0007 baseline


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UH/IB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: terrestrial biome

characteristic: environment (biome)

text: human-associated habitat

text: stool

text: Finland

text: stool

text: human-gut

text: metagenome

text: human gut metagenome

text: no

text: Parkinson's Disease Microbiome

text: human gut metagenome

text: Illumina MiSeq

text: baseline

characteristic: timepoint

text: C0009 baseline

characteristic: title


text: UH/IB

text: public

text: terrestrial biome

text: human-associated habitat

characteristic: environment (feature)

text: stool

characteristic: environment (material)

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: stool

characteristic: host body product

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

characteristic: organism

text: no

characteristic: parkinson

characteristic: pcr primers

text: Parkinson's Disease Microbiome

characteristic: project name

text: human gut metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: baseline

text: C0015 baseline


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UH/IB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: terrestrial biome

characteristic: environment (biome)

text: human-associated habitat

text: stool

text: Finland

text: stool

text: human-gut

text: metagenome

text: human gut metagenome

text: no

text: Parkinson's Disease Microbiome

text: human gut metagenome

text: Illumina MiSeq

characteristic: target gene

characteristic: target subfragment

text: baseline

text: C0018 baseline


text: UH/IB

text: public

text: terrestrial biome

text: human-associated habitat

characteristic: environment (feature)

text: stool

characteristic: environment (material)

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: stool

characteristic: host body product

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

characteristic: organism

text: no

characteristic: parkinson

characteristic: pcr primers

text: Parkinson's Disease Microbiome

text: human gut metagenome

text: Illumina MiSeq

text: baseline

characteristic: timepoint

text: C0019 baseline

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UH/IB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: terrestrial biome

characteristic: environment (biome)

text: human-associated habitat

text: stool

text: Finland

text: stool

text: human-gut

text: metagenome

text: human gut metagenome

text: no

text: Parkinson's Disease Microbiome

characteristic: project name

text: human gut metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: baseline

text: C0020 baseline


text: UH/IB

text: public

text: terrestrial biome

text: human-associated habitat

characteristic: environment (feature)

text: stool

characteristic: environment (material)

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: stool

characteristic: host body product

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

characteristic: organism

text: no

characteristic: parkinson

characteristic: pcr primers

text: Parkinson's Disease Microbiome

text: human gut metagenome

text: Illumina MiSeq

characteristic: target gene

characteristic: target subfragment

text: baseline

text: C0021 baseline


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UH/IB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: terrestrial biome

characteristic: environment (biome)

text: human-associated habitat

text: stool

text: Finland

text: stool

text: human-gut

text: metagenome

text: human gut metagenome

text: no

text: Parkinson's Disease Microbiome

text: human gut metagenome

text: Illumina MiSeq

text: baseline

characteristic: timepoint

text: C0023 baseline

characteristic: title


text: UH/IB

text: public

text: terrestrial biome

text: human-associated habitat

characteristic: environment (feature)

text: stool

characteristic: environment (material)

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: stool

characteristic: host body product

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

characteristic: organism

text: no

characteristic: parkinson

characteristic: pcr primers

text: Parkinson's Disease Microbiome

characteristic: project name

text: human gut metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: baseline

text: C0024 baseline


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UH/IB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: terrestrial biome

characteristic: environment (biome)

text: human-associated habitat

text: stool

text: Finland

text: stool

text: human-gut

text: metagenome

text: human gut metagenome

text: no

text: Parkinson's Disease Microbiome

text: human gut metagenome

text: Illumina MiSeq

characteristic: target gene

characteristic: target subfragment

text: baseline

text: C0026 baseline


text: UH/IB

text: public

text: terrestrial biome

text: human-associated habitat

characteristic: environment (feature)

text: stool

characteristic: environment (material)

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: stool

characteristic: host body product

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

characteristic: organism

text: no

characteristic: parkinson

characteristic: pcr primers

text: Parkinson's Disease Microbiome

text: human gut metagenome

text: Illumina MiSeq

text: baseline

characteristic: timepoint

text: C0028 baseline

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UH/IB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: terrestrial biome

characteristic: environment (biome)

text: human-associated habitat

text: stool

text: Finland

text: stool

text: human-gut

text: metagenome

text: human gut metagenome

text: no

text: Parkinson's Disease Microbiome

characteristic: project name

text: human gut metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: baseline

text: C0030 baseline


text: UH/IB

text: public

text: terrestrial biome

text: human-associated habitat

characteristic: environment (feature)

text: stool

characteristic: environment (material)

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: stool

characteristic: host body product

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

characteristic: organism

text: no

characteristic: parkinson

characteristic: pcr primers

text: Parkinson's Disease Microbiome

text: human gut metagenome

text: Illumina MiSeq

characteristic: target gene

characteristic: target subfragment

text: baseline

text: C0032 baseline


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UH/IB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: terrestrial biome

characteristic: environment (biome)

text: human-associated habitat

text: stool

text: Finland

text: stool

text: human-gut

text: metagenome

text: human gut metagenome

text: no

text: Parkinson's Disease Microbiome

text: human gut metagenome

text: Illumina MiSeq

text: baseline

characteristic: timepoint

text: C0034 baseline

characteristic: title


text: UH/IB

text: public

text: terrestrial biome

text: human-associated habitat

characteristic: environment (feature)

text: stool

characteristic: environment (material)

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: stool

characteristic: host body product

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

characteristic: organism

text: no

characteristic: parkinson

characteristic: pcr primers

text: Parkinson's Disease Microbiome

characteristic: project name

text: human gut metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: baseline

text: C0035 baseline


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UH/IB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: terrestrial biome

characteristic: environment (biome)

text: human-associated habitat

text: stool

text: Finland

text: stool

text: human-gut

text: metagenome

text: human gut metagenome

text: no

text: Parkinson's Disease Microbiome

text: human gut metagenome

text: Illumina MiSeq

characteristic: target gene

characteristic: target subfragment

text: baseline

text: C0040 baseline


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