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text: phyllosphere metagenome

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text: S.Nd3.S4.I.N.0714.1 Amplicon-Seq 16S tech rep 1


text: UPSC

text: public

text: phyllosphere metagenome

text: Needles Ageclass3 Jul S

text: phyllosphere metagenome

text: phyllosphere metagenome

text: S.Nd3.S4.I.N.0714.1 Amplicon-Seq 16S tech rep 2


text: UPSC

text: public

text: phyllosphere metagenome

text: Needles Ageclass3 Jul S

text: phyllosphere metagenome

text: phyllosphere metagenome

text: S.Nd3.S4.I.N.0714.1 Amplicon-Seq 16S tech rep 3


text: UPSC

text: public

text: phyllosphere metagenome

text: Needles Ageclass3 Jul S

text: phyllosphere metagenome

text: phyllosphere metagenome

text: S.Nd3.S4.I.N.0714.1 Amplicon-Seq 16S tech rep 4


text: UPSC

text: public

text: phyllosphere metagenome

text: Needles Ageclass3 Jul S

text: phyllosphere metagenome

text: phyllosphere metagenome

text: S.Nd3.S4.I.N.0714.1 Amplicon-Seq 16S tech rep 5


text: UPSC

text: public

text: phyllosphere metagenome

text: Needles Ageclass3 Jul S

text: phyllosphere metagenome

text: phyllosphere metagenome

text: S.Nd3.S4.I.N.0714.1 Amplicon-Seq 16S tech rep 6


text: UPSC

text: public

text: phyllosphere metagenome

text: Needles Ageclass3 Jul S

text: phyllosphere metagenome

text: phyllosphere metagenome

text: S.Nd3.S4.I.N.0714.1 Amplicon-Seq 16S tech rep 7


text: UPSC

text: public

text: phyllosphere metagenome

text: Needles Ageclass3 Jul S

text: phyllosphere metagenome

text: phyllosphere metagenome

text: S.Nd3.S4.I.N.0714.1 Amplicon-Seq ITS tech rep 1


text: UPSC

text: public

text: phyllosphere metagenome

text: Needles Ageclass3 Jul S

text: phyllosphere metagenome

text: phyllosphere metagenome

text: S.Nd3.S4.I.N.0714.1 Amplicon-Seq ITS tech rep 2


text: UPSC

text: public

text: phyllosphere metagenome

text: Needles Ageclass3 Jul S

text: phyllosphere metagenome

text: phyllosphere metagenome

text: S.Nd3.S4.I.N.0714.1 Amplicon-Seq ITS tech rep 3


text: UPSC

text: public

text: phyllosphere metagenome

text: Needles Ageclass3 Jul S

text: phyllosphere metagenome

text: phyllosphere metagenome

text: S.Nd3.S4.I.N.0714.2 Amplicon-Seq 16S tech rep 1


text: UPSC

text: public

text: phyllosphere metagenome

text: Needles Ageclass3 Jul S

text: phyllosphere metagenome

text: phyllosphere metagenome

text: S.Nd3.S4.I.N.0714.2 Amplicon-Seq 16S tech rep 2


text: UPSC

text: public

text: phyllosphere metagenome

text: Needles Ageclass3 Jul S

text: phyllosphere metagenome

text: phyllosphere metagenome

text: S.Nd3.S4.I.N.0714.2 Amplicon-Seq 16S tech rep 3


text: UPSC

text: public

text: phyllosphere metagenome

text: Needles Ageclass3 Jul S

text: phyllosphere metagenome

text: phyllosphere metagenome

text: S.Nd3.S4.I.N.0714.2 Amplicon-Seq 16S tech rep 4


text: UPSC

text: public

text: phyllosphere metagenome

text: Needles Ageclass3 Jul S

text: phyllosphere metagenome

text: phyllosphere metagenome

text: S.Nd3.S4.I.N.0714.2 Amplicon-Seq 16S tech rep 5


text: UPSC

text: public

text: phyllosphere metagenome

text: Needles Ageclass3 Jul S

text: phyllosphere metagenome

text: phyllosphere metagenome

text: S.Nd3.S4.I.N.0714.2 Amplicon-Seq 16S tech rep 6


text: UPSC

text: public

text: phyllosphere metagenome

text: Needles Ageclass3 Jul S

text: phyllosphere metagenome

text: phyllosphere metagenome

text: S.Nd3.S4.I.N.0714.2 Amplicon-Seq 16S tech rep 7


text: UPSC

text: public

text: phyllosphere metagenome

text: Needles Ageclass3 Jul S

text: phyllosphere metagenome

text: phyllosphere metagenome

text: S.Nd3.S4.I.N.0714.2 Amplicon-Seq ITS tech rep 1


text: UPSC

text: public

text: phyllosphere metagenome

text: Needles Ageclass3 Jul S

text: phyllosphere metagenome

text: phyllosphere metagenome

text: S.Nd3.S4.I.N.0714.2 Amplicon-Seq ITS tech rep 2


text: UPSC

text: public

text: phyllosphere metagenome

text: Needles Ageclass3 Jul S

text: phyllosphere metagenome

text: phyllosphere metagenome

text: S.Nd3.S4.I.N.0714.2 Amplicon-Seq ITS tech rep 3


text: UPSC

text: public

text: phyllosphere metagenome

text: Needles Ageclass3 Jul S

text: phyllosphere metagenome

text: phyllosphere metagenome

text: S.Nd3.S4.I.N.0714.3 Amplicon-Seq 16S tech rep 1


text: UPSC

text: public

text: phyllosphere metagenome

text: Needles Ageclass3 Jul S

text: phyllosphere metagenome

text: phyllosphere metagenome

text: S.Nd3.S4.I.N.0714.3 Amplicon-Seq 16S tech rep 2


text: UPSC

text: public

text: phyllosphere metagenome

text: Needles Ageclass3 Jul S

text: phyllosphere metagenome

text: phyllosphere metagenome

text: S.Nd3.S4.I.N.0714.3 Amplicon-Seq 16S tech rep 3


text: UPSC

text: public

text: phyllosphere metagenome

text: Needles Ageclass3 Jul S

text: phyllosphere metagenome

text: phyllosphere metagenome

text: S.Nd3.S4.I.N.0714.3 Amplicon-Seq 16S tech rep 4


text: UPSC

text: public

text: phyllosphere metagenome

text: Needles Ageclass3 Jul S

text: phyllosphere metagenome

text: phyllosphere metagenome

text: S.Nd3.S4.I.N.0714.3 Amplicon-Seq 16S tech rep 5


text: UPSC

text: public

text: phyllosphere metagenome

text: Needles Ageclass3 Jul S

text: phyllosphere metagenome

text: phyllosphere metagenome

text: S.Nd3.S4.I.N.0714.3 Amplicon-Seq 16S tech rep 6


text: UPSC

text: public

text: phyllosphere metagenome

text: Needles Ageclass3 Jul S

text: phyllosphere metagenome

text: phyllosphere metagenome

text: S.Nd3.S4.I.N.0714.3 Amplicon-Seq 16S tech rep 7


text: UPSC

text: public

text: phyllosphere metagenome

text: Needles Ageclass3 Jul S

text: phyllosphere metagenome

text: phyllosphere metagenome

text: S.Nd3.S4.I.N.0714.3 Amplicon-Seq ITS tech rep 1


text: UPSC

text: public

text: phyllosphere metagenome

text: Needles Ageclass3 Jul S

text: phyllosphere metagenome

text: phyllosphere metagenome

text: S.Nd3.S4.I.N.0714.3 Amplicon-Seq ITS tech rep 2


text: UPSC

text: public

text: phyllosphere metagenome

text: Needles Ageclass3 Jul S

text: phyllosphere metagenome

text: phyllosphere metagenome

text: S.Nd3.S4.I.N.0714.3 Amplicon-Seq ITS tech rep 3


text: UPSC

text: public

text: Norway spruce

text: Buds Aug U

text: Picea abies

text: Picea abies

text: A.Bd.U2.II.N.0814.1 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Buds Aug U

text: Picea abies

text: Picea abies

text: A.Bd.U2.II.N.0814.2 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Buds Aug U

text: Picea abies

text: Picea abies

text: A.Bd.U2.II.N.0814.3 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Buds Jun U

text: Picea abies

text: Picea abies

text: A.Bd.U2.N.0614.1 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Buds Jun U

text: Picea abies

text: Picea abies

text: A.Bd.U2.N.0614.2 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Buds Jun U

text: Picea abies

text: Picea abies

text: A.Bd.U2.N.0614.3 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Buds Aug ster U

text: Picea abies

text: Picea abies

text: A.Bd.U2.Y.0814.1 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Buds Aug ster U

text: Picea abies

text: Picea abies

text: A.Bd.U2.Y.0814.2 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Buds Aug ster U

text: Picea abies

text: Picea abies

text: A.Bd.U2.Y.0814.3 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Bark Jul V

text: Picea abies

text: Picea abies

text: A.Br.Vn.N.0714.1 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Bark Jul V

text: Picea abies

text: Picea abies

text: A.Br.Vn.N.0714.2 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Bark Jul V

text: Picea abies

text: Picea abies

text: A.Br.Vn.N.0714.3 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Leaves Jul V

text: Picea abies

text: Picea abies

text: A.Lv.Vn.N.0714.1 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Leaves Jul V

text: Picea abies

text: Picea abies

text: A.Lv.Vn.N.0714.2 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Leaves Jul V

text: Picea abies

text: Picea abies

text: A.Lv.Vn.N.0714.3 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Suckers Jul V

text: Picea abies

text: Picea abies

text: A.Sk.Vn.N.0714.1 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Suckers Jul V

text: Picea abies

text: Picea abies

text: A.Sk.Vn.N.0714.2 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Suckers Jul V

text: Picea abies

text: Picea abies

text: A.Sk.Vn.N.0714.3 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Buds Jun H

text: Picea abies

text: Picea abies

text: S.Bd.Hs.B2.N.0614.1 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Buds Jun H

text: Picea abies

text: Picea abies

text: S.Bd.Hs.K.N.0614.1 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Buds Jun H

text: Picea abies

text: Picea abies

text: S.Bd.Hs.S.N.0614.1 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Buds Jun H

text: Picea abies

text: Picea abies

text: S.Bd.Hs.V.N.0614.1 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Buds Jun H

text: Picea abies

text: Picea abies

text: S.Bd.Hs.Y.N.0614.1 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Buds Jun H

text: Picea abies

text: Picea abies

text: S.Bd.Hs.Z.N.0614.1 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Buds Jun S

text: Picea abies

text: Picea abies

text: S.Bd.S4.I.N.0614.1 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Buds Jun S

text: Picea abies

text: Picea abies

text: S.Bd.S4.I.N.0614.2 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Buds Jun S

text: Picea abies

text: Picea abies

text: S.Bd.S4.I.N.0614.3 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Buds Aug S

text: Picea abies

text: Picea abies

text: S.Bd.S4.I.N.0814.1 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Buds Aug S

text: Picea abies

text: Picea abies

text: S.Bd.S4.I.N.0814.2 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Buds Aug S

text: Picea abies

text: Picea abies

text: S.Bd.S4.I.N.0814.3 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Buds Aug ster S

text: Picea abies

text: Picea abies

text: S.Bd.S4.I.Y.0814.1 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Buds Aug ster S

text: Picea abies

text: Picea abies

text: S.Bd.S4.I.Y.0814.2 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Buds Aug ster S

text: Picea abies

text: Picea abies

text: S.Bd.S4.I.Y.0814.3 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Seedlings needles Aug U

text: Picea abies

text: Picea abies

text: S.Nd.Um.FS.N.0814.1 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Seedlings needles Aug U

text: Picea abies

text: Picea abies

text: S.Nd.Um.FS.N.0814.2 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Seedlings needles Aug U

text: Picea abies

text: Picea abies

text: S.Nd.Um.FS.N.0814.3 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Seedlings needles Aug ster U

text: Picea abies

text: Picea abies

text: S.Nd.Um.FS.Y.0814.1 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Seedlings needles Aug ster U

text: Picea abies

text: Picea abies

text: S.Nd.Um.FS.Y.0814.2 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Seedlings needles Aug ster U

text: Picea abies

text: Picea abies

text: S.Nd.Um.FS.Y.0814.3 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Needles Ageclass1 Jul S

text: Picea abies

text: Picea abies

text: S.Nd1.S4.I.N.0714.1 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Needles Ageclass1 Jul S

text: Picea abies

text: Picea abies

text: S.Nd1.S4.I.N.0714.2 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Needles Ageclass1 Jul S

text: Picea abies

text: Picea abies

text: S.Nd1.S4.I.N.0714.3 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Needles Ageclass2 Jul S

text: Picea abies

text: Picea abies

text: S.Nd2.S4.I.N.0714.1 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Needles Ageclass2 Jul S

text: Picea abies

text: Picea abies

text: S.Nd2.S4.I.N.0714.2 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Needles Ageclass2 Jul S

text: Picea abies

text: Picea abies

text: S.Nd2.S4.I.N.0714.3 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Needles Ageclass3 Jul S

text: Picea abies

text: Picea abies

text: S.Nd3.S4.I.N.0714.1 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Needles Ageclass3 Jul S

text: Picea abies

text: Picea abies

text: S.Nd3.S4.I.N.0714.2 RNA-Seq


text: UPSC

text: public

text: Norway spruce

text: Needles Ageclass3 Jul S

text: Picea abies

text: Picea abies

text: S.Nd3.S4.I.N.0714.3 RNA-Seq


text: EMBL

text: public

text: baker's yeast

text: gDNA sequencing for SK1 pool, replicate 1. The read sequences are structured like NHNHNHHHH-{primer sequence}- {guide sequence} - {structural guide sequence}-{donor sequence}. The first NHNHNHHHH portion are randomized nucleotides introduced for sequencing purposes. The guide sequences is flanked by the primer sequence CTGGGAGCTGCGATTGGCAG and structural guide sequence GTTTAAGAGCTA. 1 mismatch was allowed and both primer and guide sequence were trimmed in R using Biostrings. Only guides that are between 18 to 21 bp are used for subsequent analysis.

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: EMBL

text: public

text: baker's yeast

text: gDNA sequencing for SK1 pool, replicate 2. The read sequences are structured like NHNHNHHHH-{primer sequence}- {guide sequence} - {structural guide sequence}-{donor sequence}. The first NHNHNHHHH portion are randomized nucleotides introduced for sequencing purposes. The guide sequences is flanked by the primer sequence CTGGGAGCTGCGATTGGCAG and structural guide sequence GTTTAAGAGCTA. 1 mismatch was allowed and both primer and guide sequence were trimmed in R using Biostrings. Only guides that are between 18 to 21 bp are used for subsequent analysis.

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: EMBL

text: public

text: baker's yeast

text: gDNA sequencing for SK1 pool, replicate 3. The read sequences are structured like NHNHNHHHH-{primer sequence}- {guide sequence} - {structural guide sequence}-{donor sequence}. The first NHNHNHHHH portion are randomized nucleotides introduced for sequencing purposes. The guide sequences is flanked by the primer sequence CTGGGAGCTGCGATTGGCAG and structural guide sequence GTTTAAGAGCTA. 1 mismatch was allowed and both primer and guide sequence were trimmed in R using Biostrings. Only guides that are between 18 to 21 bp are used for subsequent analysis.

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: EMBL

text: public

text: baker's yeast

text: gDNA sequencing for RM1 pool, replicate 1. The read sequences are structured like HNHNHN-{primer sequence}- {guide sequence} - {structural guide sequence}-{donor sequence}. The first HNHNHN portion are randomized nucleotides introduced for sequencing purposes. The guide sequences is flanked by the primer sequence GGGAGCTGCGATTGGCAG and structural guide sequence GTTTAAGAGCTA. 1 mismatch was allowed and both primer and guide sequence were trimmed in R using Biostrings. Only guides that are between 18 to 21 bp are used for subsequent analysis.

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: EMBL

text: public

text: baker's yeast

text: gDNA sequencing for RM11 pool, replicate 2. The read sequences are structured like HNHNHN-{primer sequence}- {guide sequence} - {structural guide sequence}-{donor sequence}. The first HNHNHN portion are randomized nucleotides introduced for sequencing purposes. The guide sequences is flanked by the primer sequence GGGAGCTGCGATTGGCAG and structural guide sequence GTTTAAGAGCTA. 1 mismatch was allowed and both primer and guide sequence were trimmed in R using Biostrings. Only guides that are between 18 to 21 bp are used for subsequent analysis.

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: EMBL

text: public

text: baker's yeast

text: gDNA sequencing for RM11 pool, replicate 3. The read sequences are structured like HNHNHN-{primer sequence}- {guide sequence} - {structural guide sequence}-{donor sequence}. The first HNHNHN portion are randomized nucleotides introduced for sequencing purposes. The guide sequences is flanked by the primer sequence GGGAGCTGCGATTGGCAG and structural guide sequence GTTTAAGAGCTA. 1 mismatch was allowed and both primer and guide sequence were trimmed in R using Biostrings. Only guides that are between 18 to 21 bp are used for subsequent analysis.

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: EMBL

text: public

text: baker's yeast

text: RNA sequencing for SK1 pool, replicate 1. A structural-guide-specific primer was used for reverse transcription. The read sequences are structured like NHNHHH-{primer sequence}- {guide sequence} - {structural guide sequence}-{donor sequence}. The first NHNHHH portion are randomized nucleotides introduced for sequencing purposes. The guide sequences is flanked by the primer sequence GCGATTGGCAGGCGCGCC and structural guide sequence GTTTAAGAGCTA. 1 mismatch was allowed and both primer and guide sequence were trimmed in R using Biostrings. Only guides that are between 18 to 21 bp are used for subsequent analysis.

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: EMBL

text: public

text: baker's yeast

text: RNA sequencing for SK1 pool, replicate 2. A structural-guide-specific primer was used for reverse transcription. The read sequences are structured like NHNHHH-{primer sequence}- {guide sequence} - {structural guide sequence}-{donor sequence}. The first NHNHHH portion are randomized nucleotides introduced for sequencing purposes. The guide sequences is flanked by the primer sequence GCGATTGGCAGGCGCGCC and structural guide sequence GTTTAAGAGCTA. 1 mismatch was allowed and both primer and guide sequence were trimmed in R using Biostrings. Only guides that are between 18 to 21 bp are used for subsequent analysis.

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: EMBL

text: public

text: baker's yeast

text: RNA sequencing for SK1 pool, replicate 3. A structural-guide-specific primer was used for reverse transcription. The read sequences are structured like NHNHHH-{primer sequence}- {guide sequence} - {structural guide sequence}-{donor sequence}. The first NHNHHH portion are randomized nucleotides introduced for sequencing purposes. The guide sequences is flanked by the primer sequence GCGATTGGCAGGCGCGCC and structural guide sequence GTTTAAGAGCTA. 1 mismatch was allowed and both primer and guide sequence were trimmed in R using Biostrings. Only guides that are between 18 to 21 bp are used for subsequent analysis.

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: EMBL

text: public

text: baker's yeast

text: RNA sequencing for SK1 pool, replicate 1. Random hexamers are used for reverse transcriptionThe read sequences are structured like NHNHHH-{primer sequence}- {guide sequence} - {structural guide sequence}-{donor sequence}. The first NHNHHH portion are randomized nucleotides introduced for sequencing purposes. The guide sequences is flanked by the primer sequence GCGATTGGCAGGCGCGCC and structural guide sequence GTTTAAGAGCTA. 1 mismatch was allowed and both primer and guide sequence were trimmed in R using Biostrings. Only guides that are between 18 to 21 bp are used for subsequent analysis.

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: EMBL

text: public

text: baker's yeast

text: RNA sequencing for SK1 pool, replicate 2. Random hexamers are used for reverse transcriptionThe read sequences are structured like NHNHHH-{primer sequence}- {guide sequence} - {structural guide sequence}-{donor sequence}. The first NHNHHH portion are randomized nucleotides introduced for sequencing purposes. The guide sequences is flanked by the primer sequence GCGATTGGCAGGCGCGCC and structural guide sequence GTTTAAGAGCTA. 1 mismatch was allowed and both primer and guide sequence were trimmed in R using Biostrings. Only guides that are between 18 to 21 bp are used for subsequent analysis.

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: EMBL

text: public

text: baker's yeast

text: RNA sequencing for SK1 pool, replicate 3. Random hexamers are used for reverse transcriptionThe read sequences are structured like NHNHHH-{primer sequence}- {guide sequence} - {structural guide sequence}-{donor sequence}. The first NHNHHH portion are randomized nucleotides introduced for sequencing purposes. The guide sequence is flanked by the primer sequence GCGATTGGCAGGCGCGCC and structural guide sequence GTTTAAGAGCTA. 1 mismatch was allowed and both primer and guide sequence were trimmed in R using Biostrings. Only guides that are between 18 to 21 bp are used for subsequent analysis.

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: EMBL

text: public

text: baker's yeast

text: RNA sequencing for RM11 pool, replicate 1. A structural-guide-specific primer was used for reverse transcription. The read sequences are structured like HNH-{primer sequence}- {guide sequence} - {structural guide sequence}-{donor sequence}. The first HNH portion are randomized nucleotides introduced for sequencing purposes. The guide sequence is flanked by the primer sequence GCGATTGGCAGGCGCGCC and structural guide sequence GTTTAAGAGCTA. 1 mismatch was allowed and both primer and guide sequence were trimmed in R using Biostrings. Only guides that are between 18 to 21 bp are used for subsequent analysis.

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: EMBL

text: public

text: baker's yeast

text: RNA sequencing for RM11 pool, replicate 2. A structural-guide-specific primer was used for reverse transcription. The read sequences are structured like HNH-{primer sequence}- {guide sequence} - {structural guide sequence}-{donor sequence}. The first HNH portion are randomized nucleotides introduced for sequencing purposes. The guide sequence is flanked by the primer sequence GCGATTGGCAGGCGCGCC and structural guide sequence GTTTAAGAGCTA. 1 mismatch was allowed and both primer and guide sequence were trimmed in R using Biostrings. Only guides that are between 18 to 21 bp are used for subsequent analysis.

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: EMBL

text: public

text: baker's yeast

text: RNA sequencing for RM11 pool, replicate 3. A structural-guide-specific primer was used for reverse transcription. The read sequences are structured like HNH-{primer sequence}- {guide sequence} - {structural guide sequence}-{donor sequence}. The first HNH portion are randomized nucleotides introduced for sequencing purposes. The guide sequence is flanked by the primer sequence GCGATTGGCAGGCGCGCC and structural guide sequence GTTTAAGAGCTA. 1 mismatch was allowed and both primer and guide sequence were trimmed in R using Biostrings. Only guides that are between 18 to 21 bp are used for subsequent analysis.

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: EMBL

text: public

text: baker's yeast

text: RNA sequencing for RM11 pool, replicate 1. Random hexamers are used for reverse transcription. The read sequences are structured like HNH-{primer sequence}- {guide sequence} - {structural guide sequence}-{donor sequence}. The first HNH portion are randomized nucleotides introduced for sequencing purposes. The guide sequence is flanked by the primer sequence GCGATTGGCAGGCGCGCC and structural guide sequence GTTTAAGAGCTA. 1 mismatch was allowed and both primer and guide sequence were trimmed in R using Biostrings. Only guides that are between 18 to 21 bp are used for subsequent analysis.

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: EMBL

text: public

text: baker's yeast

text: RNA sequencing for RM11 pool, replicate 2. Random hexamers are used for reverse transcription. The read sequences are structured like HNH-{primer sequence}- {guide sequence} - {structural guide sequence}-{donor sequence}. The first HNH portion are randomized nucleotides introduced for sequencing purposes. The guide sequence is flanked by the primer sequence GCGATTGGCAGGCGCGCC and structural guide sequence GTTTAAGAGCTA. 1 mismatch was allowed and both primer and guide sequence were trimmed in R using Biostrings. Only guides that are between 18 to 21 bp are used for subsequent analysis.

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: EMBL

text: public

text: baker's yeast

text: RNA sequencing for RM11 pool, replicate 3. Random hexamers are used for reverse transcription. The read sequences are structured like HNH-{primer sequence}- {guide sequence} - {structural guide sequence}-{donor sequence}. The first HNH portion are randomized nucleotides introduced for sequencing purposes. The guide sequence is flanked by the primer sequence GCGATTGGCAGGCGCGCC and structural guide sequence GTTTAAGAGCTA. 1 mismatch was allowed and both primer and guide sequence were trimmed in R using Biostrings. Only guides that are between 18 to 21 bp are used for subsequent analysis.

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: INSERM U1170

text: public

tag: Namespace:INSERM U1170

text: ArrayExpress

characteristic: broker name

text: CD14-positive, CD16-negative classical monocyte

characteristic: cell type

text: human

text: Protocols: Peripheral blood mononucleated cells (PBMC) were obtained from healthy donor buffy coats (Etablissement Français du sang, Rungis, France), separated on Pancoll (Pan-Biotech, Dutscher, Brumath, France). Peripheral blood monocytes were enriched using the pan monocyte isolation kit (Miltenyi Biotech, Paris, France) and the AutoMacs system. Monocyte subsets were labeled with CD14-PE and CD16-APC and sorted by flow cytometry (Influx, BD biosciences). Total RNA was isolated from primary monocytes or macrophages with RNA/DNA/Protein Purification plus Norgen kit. The RNA integrity (RNA Integrity Score ≥ 7.0) was checked on the Agilent 2100 Bioanalyzer (Agilent) and quantity was determined using Qubit (Invitrogen). SureSelect Automated Strand Specific RNA Library Preparation Kit was used according to manufacturer's instructions with the Bravo Platform. Briefly, 100 ng of total RNA sample was used for poly-A mRNA selection using oligo(dT) beads and subjected to thermal mRNA fragmentation. The fragmented mRNA samples were subjected to cDNA synthesis and were further converted into double stranded DNA using the reagents supplied in the kit, and the resulting dsDNA was used for library preparation. The final libraries were processed using Illumina TruSeq Stranded mRNA Library Prep Kit.

text: normal

characteristic: disease

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: INSERM U1170

text: public

text: ArrayExpress

text: CD14-low, CD16-positive monocyte

text: human

text: normal

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens


characteristic: External Id

text: TRINITY COLLEGE DUBLIN

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:TRINITY COLLEGE DUBLIN

text: goat

text: Goat from Neolithic Asgagi Pinar, Turkey

text: Capra hircus

text: Capra hircus


text: TRINITY COLLEGE DUBLIN

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: goat

text: Goat from Bronze Age Tilla Bulak, Uzbekistan

text: Capra hircus

text: Capra hircus


text: TRINITY COLLEGE DUBLIN

text: public

characteristic: Submitter Id

text: goat

characteristic: common name

text: Goat from Neolithic Cavdar, Bulgaria.

characteristic: description

text: Capra hircus

text: Capra hircus


text: TRINITY COLLEGE DUBLIN

text: public

text: wild goat

text: Bezoar from the Epipaleolithic site Direkli Cave, Taurus Mountains, Turkey

text: Capra aegagrus

characteristic: organism

text: Capra aegagrus

characteristic: title


text: TRINITY COLLEGE DUBLIN

text: public

text: goat

text: Goat from Chalcolithic Drama, Bulgaria.

text: Capra hircus

text: Capra hircus


text: TRINITY COLLEGE DUBLIN

text: public

text: goat

text: Goat from Bronze Age Kanligecit, Turkey.

text: Capra hircus

text: Capra hircus


text: TRINITY COLLEGE DUBLIN

text: public

text: goat

text: Goat from Neolithic Kovacevo, Bulgaria.

text: Capra hircus

text: Capra hircus


text: TRINITY COLLEGE DUBLIN

text: public

text: goat

text: Goat from the Neolithic occupation of Monjukli Depe, Turkmenistan.

text: Capra hircus

text: Capra hircus


text: TRINITY COLLEGE DUBLIN

text: public

text: goat

text: Goat from Neolithic Ovcarovo-gorata, Bulgaria.

text: Capra hircus

text: Capra hircus


text: TRINITY COLLEGE DUBLIN

text: public

text: goat

text: Goat from Chalcolithic Pietrele, Romania.

text: Capra hircus

text: Capra hircus


text: TRINITY COLLEGE DUBLIN

text: public

text: goat

text: Goat from Bronze Age Tachti Perda, Georgia.

text: Capra hircus

text: Capra hircus


text: TRINITY COLLEGE DUBLIN

text: public

text: goat

text: Goat from Neolithic Ulucak Hoyok, Turkey.

text: Capra hircus

text: Capra hircus


text: TRINITY COLLEGE DUBLIN

text: public

text: goat

text: Goat from Neolithic Uivar, Romania.

text: Capra hircus

text: Capra hircus


text: INRA (Nouvelle-Aquitaine-Bordeaux)

text: public

text: Fusarium tricinctum

text: Fusarium tricinctum

text: gDNA from Fusarium tricicntum strain INRA104


text: EMBL

text: public

text: fruit fly

text: adult fly RNAseq biological replicate 1. mRNA was extracted from whole flies using Trizol LS (Ambion) according to manufacture’s protocol. 10μg of purified total RNA were depleted from rRNA and small RNAs through two consecutive poly-A mRNA capture steps, using oligo-dT25 coated magnetic Dynabeads (Sigma-Aldrich) according to manufactures protocol. 500ng purified mRNA were submitted for library preparation. Barcoded stranded mRNA-seq libraries were prepared using the Illumina TruSeq RNA Sample Preparation v2 Kit (attached, Illumina, San Diego, CA, USA) implemented on the liquid handling robot Beckman FXP2.

text: Drosophila melanogaster

text: Drosophila melanogaster


text: EMBL

text: public

text: fruit fly

text: adult fly RNAseq biological replicate 2. mRNA was extracted from whole flies using Trizol LS (Ambion) according to manufacture’s protocol. 10μg of purified total RNA were depleted from rRNA and small RNAs through two consecutive poly-A mRNA capture steps, using oligo-dT25 coated magnetic Dynabeads (Sigma-Aldrich) according to manufactures protocol. 500ng purified mRNA were submitted for library preparation. Barcoded stranded mRNA-seq libraries were prepared using the Illumina TruSeq RNA Sample Preparation v2 Kit (attached, Illumina, San Diego, CA, USA) implemented on the liquid handling robot Beckman FXP2.

text: Drosophila melanogaster

text: Drosophila melanogaster


text: EMBL

text: public

text: fruit fly

text: adult fly RNAseq biological replicate 3. mRNA was extracted from whole flies using Trizol LS (Ambion) according to manufacture’s protocol. 10μg of purified total RNA were depleted from rRNA and small RNAs through two consecutive poly-A mRNA capture steps, using oligo-dT25 coated magnetic Dynabeads (Sigma-Aldrich) according to manufactures protocol. 500ng purified mRNA were submitted for library preparation. Barcoded stranded mRNA-seq libraries were prepared using the Illumina TruSeq RNA Sample Preparation v2 Kit (attached, Illumina, San Diego, CA, USA) implemented on the liquid handling robot Beckman FXP2.

text: Drosophila melanogaster

text: Drosophila melanogaster


text: EMBL

text: public

text: fruit fly

text: adult fly RNAseq biological replicate 4. mRNA was extracted from whole flies using Trizol LS (Ambion) according to manufacture’s protocol. 10μg of purified total RNA were depleted from rRNA and small RNAs through two consecutive poly-A mRNA capture steps, using oligo-dT25 coated magnetic Dynabeads (Sigma-Aldrich) according to manufactures protocol. 500ng purified mRNA were submitted for library preparation. Barcoded stranded mRNA-seq libraries were prepared using the Illumina TruSeq RNA Sample Preparation v2 Kit (attached, Illumina, San Diego, CA, USA) implemented on the liquid handling robot Beckman FXP2.

text: Drosophila melanogaster

text: Drosophila melanogaster


text: public

tag: Namespace:Institute of Hematology and Center for Hemato-Oncology Research (C.R.E.O.), University and Hospital of Perugia

text: human

text: Homo sapiens

text: Homo sapiens


text: Institute of Hematology and Center for Hemato-Oncology Research (C.R.E.O.), University and Hospital of Perugia

text: public

text: human

text: Homo sapiens

text: Homo sapiens


text: EMBL

text: public

text: fruit fly

text: adult fly line expressing GFP Mago, RNAseq biological replicate 2. mRNA was extracted from whole flies using Trizol LS (Ambion) according to manufacture’s protocol. 10μg of purified total RNA were depleted from rRNA and small RNAs through two consecutive poly-A mRNA capture steps, using oligo-dT25 coated magnetic Dynabeads (Sigma-Aldrich) according to manufactures protocol. 500ng purified mRNA were submitted for library preparation. Barcoded stranded mRNA-seq libraries were prepared using the Illumina TruSeq RNA Sample Preparation v2 Kit (attached, Illumina, San Diego, CA, USA) implemented on the liquid handling robot Beckman FXP2.

text: Drosophila melanogaster

text: Drosophila melanogaster


text: EMBL

text: public

text: fruit fly

text: adult fly line expressing GFP Mago, RNAseq biological replicate 3. mRNA was extracted from whole flies using Trizol LS (Ambion) according to manufacture’s protocol. 10μg of purified total RNA were depleted from rRNA and small RNAs through two consecutive poly-A mRNA capture steps, using oligo-dT25 coated magnetic Dynabeads (Sigma-Aldrich) according to manufactures protocol. 500ng purified mRNA were submitted for library preparation. Barcoded stranded mRNA-seq libraries were prepared using the Illumina TruSeq RNA Sample Preparation v2 Kit (attached, Illumina, San Diego, CA, USA) implemented on the liquid handling robot Beckman FXP2.

text: Drosophila melanogaster

text: Drosophila melanogaster


text: EMBL

text: public

text: fruit fly

text: adult fly line expressing GFP Mago, RNAseq biological replicate 1. mRNA was extracted from whole flies using Trizol LS (Ambion) according to manufacture’s protocol. 10μg of purified total RNA were depleted from rRNA and small RNAs through two consecutive poly-A mRNA capture steps, using oligo-dT25 coated magnetic Dynabeads (Sigma-Aldrich) according to manufactures protocol. 500ng purified mRNA were submitted for library preparation. Barcoded stranded mRNA-seq libraries were prepared using the Illumina TruSeq RNA Sample Preparation v2 Kit (attached, Illumina, San Diego, CA, USA) implemented on the liquid handling robot Beckman FXP2.

text: Drosophila melanogaster

text: Drosophila melanogaster


text: BCCHR

text: public

text: metagenome

text: metagenome

text: SHIP-Mouse Intestinal Content


status: KILLED

text: Public Health Agency of Sweden

text: killed

text: sam_FOHMtest_e04edbaa-693b-4131-818e-1c5a5df275c3

tag: Namespace:Public Health Agency of Sweden

text: FOHM

text: Sweden

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: host scientific name

text: yes

characteristic: isolate

text: Salmonella enterica

text: Salmonella enterica

text: Salmonella enterica


characteristic: ENA-CHECKLIST

text: public

tag: Namespace:University of Chinese Academy of Sciences

characteristic: collection date

text: N0 summer

text: wheat-maize

characteristic: environment (biome)

text: agriculture

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: China

unit: m

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: soil metagenome

text: long-term N fertilization

characteristic: project name

text: soil metagenome

text: Illumina

characteristic: sequencing method

text: soil

characteristic: soil environmental package


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Chinese Academy of Sciences

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: wheat-maize

text: agriculture

text: soil

text: China

text: metagenome

text: soil metagenome

characteristic: organism

text: long-term N fertilization

text: soil metagenome

text: Illumina

text: soil

characteristic: title


name: Genome Assembly of Prunus yedoensis var. nudiflora

characteristic: ENA-CHECKLIST

text: public

tag: Namespace:Department of Bioscience and Bioinformatics, Myongji University

text: Prunus yedoensis var. nudiflora

text: Prunus yedoensis var. nudiflora


text: public

characteristic: collection date

text: wheat-maize

characteristic: environment (biome)

text: agriculture

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: soil metagenome

text: soil

text: soil metagenome

text: illumina

text: soil

text: winter


E.coli C142

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: FUNCTIONAL GENOMICS CENTER ZURICH

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E.coli C142

tag: Namespace:FUNCTIONAL GENOMICS CENTER ZURICH

text: E.coli

characteristic: description

text: Escherichia coli

text: Escherichia coli

text: E.colo


E.coli C158

text: FUNCTIONAL GENOMICS CENTER ZURICH

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E.coli C158

characteristic: Submitter Id

text: E.coli

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: E.colo

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF HOHENHEIM

text: public

tag: Namespace:UNIVERSITY OF HOHENHEIM

characteristic: collection date

text: chicken

characteristic: common name

text: host-associated

characteristic: environment (biome)

text: organic

characteristic: environment (feature)

text: organic

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: Gallus gallus

text: BroilersPCaPhy

characteristic: project name

text: Gallus gallus

text: illumina

characteristic: sequencing method

text: BroilersPCaPhy


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Public Health Agency of Sweden

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: killed

text: sam_FOHMtest_65ab3e03-06a3-4ea2-9231-d61b9d9e2f68

text: FOHM

text: Sweden

text: Homo sapiens

characteristic: host scientific name

text: yes

characteristic: isolate

text: Salmonella enterica

text: Salmonella enterica

text: Salmonella enterica


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF SZEGED

text: public

characteristic: INSDC status

characteristic: SRA accession

text: _MinIon_cDNA_bc_LT966077_12h.sorted.bam.sorted.bam

tag: Namespace:UNIVERSITY OF SZEGED

characteristic: Submitter Id

text: Vaccinia virus

characteristic: organism

text: Vaccinia virus

characteristic: title


text: UNIVERSITY OF SZEGED

text: public

text: _MinIon_cDNA_bc_LT966077_1h.sorted.bam.sorted.bam

text: Vaccinia virus

text: Vaccinia virus


text: UNIVERSITY OF SZEGED

text: public

text: _MinIon_cDNA_bc_LT966077_2h.sorted.bam.sorted.bam

text: Vaccinia virus

text: Vaccinia virus


text: UNIVERSITY OF SZEGED

text: public

text: _MinIon_cDNA_bc_LT966077_3h.sorted.bam.sorted.bam

text: Vaccinia virus

text: Vaccinia virus


text: UNIVERSITY OF SZEGED

text: public

text: _MinIon_cDNA_bc_LT966077_4h.sorted.bam.sorted.bam

text: Vaccinia virus

text: Vaccinia virus


text: UNIVERSITY OF SZEGED

text: public

text: _MinIon_cDNA_bc_LT966077_6h.sorted.bam.sorted.bam

text: Vaccinia virus

text: Vaccinia virus


text: UNIVERSITY OF SZEGED

text: public

text: _MinIon_cDNA_bc_LT966077_8h.sorted.bam.sorted.bam

text: Vaccinia virus

text: Vaccinia virus


text: UNIVERSITY OF SZEGED

text: public

text: _1h_Seque_LT966077.sorted.bam.sorted.bam

text: Vaccinia virus

text: Vaccinia virus


text: UNIVERSITY OF SZEGED

text: public

text: _2h_Sequel_LT966077.sorted.bam.sorted.bam

text: Vaccinia virus

text: Vaccinia virus


text: UNIVERSITY OF SZEGED

text: public

text: _3h_Sequel_LT966077.sorted.bam.sorted.bam

text: Vaccinia virus

text: Vaccinia virus


text: UNIVERSITY OF SZEGED

text: public

text: _4h 1st_Sequel_LT966077.sorted.bam.sorted.bam

text: Vaccinia virus

text: Vaccinia virus


text: UNIVERSITY OF SZEGED

text: public

text: _4h 2nd_Sequel_LT966077.sorted.bam.sorted.bam

text: Vaccinia virus

text: Vaccinia virus


text: UNIVERSITY OF SZEGED

text: public

text: _6h_Sequel_LT966077.sorted.bam.sorted.bam

text: Vaccinia virus

text: Vaccinia virus


text: UNIVERSITY OF SZEGED

text: public

text: _8h 2nd_Sequel__LT966077.sorted.bam.sorted.bam

text: Vaccinia virus

text: Vaccinia virus


text: UNIVERSITY OF SZEGED

text: public

text: _8h_Sequel_LT966077.sorted.bam.sorted.bam

text: Vaccinia virus

text: Vaccinia virus


text: UNIVERSITY OF SZEGED

text: public

text: Chlorocebus_sabaeus_GMAP_1h_Sequel_m54181_171211_01440_Unique.sorted.bam

text: Chlorocebus sabaeus

text: Chlorocebus sabaeus


text: UNIVERSITY OF SZEGED

text: public

text: Chlorocebus_sabaeus_GMAP_2h_Sequel_m54181_171208_221101_Unique.sorted.bam

text: Chlorocebus sabaeus

text: Chlorocebus sabaeus


text: UNIVERSITY OF SZEGED

text: public

text: Chlorocebus_sabaeus_GMAP_3h_Sequel_m54181_171209_082545_Unique.sorted.bam

text: Chlorocebus sabaeus

text: Chlorocebus sabaeus


text: UNIVERSITY OF SZEGED

text: public

text: Chlorocebus_sabaeus_GMAP_4h_1_Sequel_m54181_171209_184510_Unique.sorted.bam

text: Chlorocebus sabaeus

text: Chlorocebus sabaeus


text: UNIVERSITY OF SZEGED

text: public

text: Chlorocebus_sabaeus_GMAP_6h_Sequel_m54181_171210_050457_Unique.sorted.bam

text: Chlorocebus sabaeus

text: Chlorocebus sabaeus


text: UNIVERSITY OF SZEGED

text: public

text: Chlorocebus_sabaeus_GMAP_8h_1_Sequel_m54181_171210_152434_Unique.sorted.bam

text: Chlorocebus sabaeus

text: Chlorocebus sabaeus


text: UNIVERSITY OF SZEGED

text: public

text: Chlorocebus_sabaeus_GMAP_8h_2_Sequel_m54181_171211_222319_Unique.sorted.bam

text: Chlorocebus sabaeus

text: Chlorocebus sabaeus


text: UNIVERSITY OF SZEGED

text: public

text: Chlorocebus_sabaeus_GMAP_12h_Minion_VACV_barcode07.sorted.bam

text: Chlorocebus sabaeus

text: Chlorocebus sabaeus


text: UNIVERSITY OF SZEGED

text: public

text: Chlorocebus_sabaeus_GMAP_1h_Minion_VACV_barcode01.sorted.bam

text: Chlorocebus sabaeus

text: Chlorocebus sabaeus


text: UNIVERSITY OF SZEGED

text: public

text: Chlorocebus_sabaeus_GMAP_2h_Minion_VACV_barcode02.sorted.bam

text: Chlorocebus sabaeus

text: Chlorocebus sabaeus


text: UNIVERSITY OF SZEGED

text: public

text: Chlorocebus_sabaeus_GMAP_3h_Minion_VACV_barcode03.sorted.bam

text: Chlorocebus sabaeus

text: Chlorocebus sabaeus


text: UNIVERSITY OF SZEGED

text: public

text: Chlorocebus_sabaeus_GMAP_4h_Minion_VACV_barcode04.sorted.bam

text: Chlorocebus sabaeus

text: Chlorocebus sabaeus


text: UNIVERSITY OF SZEGED

text: public

text: Chlorocebus_sabaeus_GMAP_6h_Minion_VACV_barcode05.sorted.bam

text: Chlorocebus sabaeus

text: Chlorocebus sabaeus


text: UNIVERSITY OF SZEGED

text: public

text: Chlorocebus_sabaeus_GMAP_8h_Minion_VACV_barcode06.sorted.bam

text: Chlorocebus sabaeus

text: Chlorocebus sabaeus


Vibrio sp. strain Evd11

text: Instituto Superior Tecnico

text: public

text: Vibrio sp. strain Evd11

tag: Namespace:Instituto Superior Tecnico

characteristic: collection date

text: Draft genome sequence of Vibrio sp. strain Evd11 isolated from necrotised tissue of the gorgonian coral Eunicella verrucosa

characteristic: description

text: Portugal

characteristic: geographic location (country and/or sea)

text: Faro

characteristic: geographic location (region and locality)

text: Eunicella verrucosa

text: Gorgonian coral

characteristic: isolation source

text: 37.008839 N -8.924889 W

characteristic: lat lon

text: Vibrio sp. Evd11

text: Vibrio sp. Evd11

text: Genome sequence of Vibrio sp. strain Evd11


text: Plasmodium falciparum

characteristic: ArrayExpress-SPECIES

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: malaria parasite P. falciparum

characteristic: common name

text: Plasmodium falciparum

text: Plasmodium falciparum

characteristic: subject id


characteristic: ENA-CHECKLIST

text: ETH ZURICH D-BSSE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:ETH ZURICH D-BSSE

text: human

text: Patient 01; matched normal sample (NO); multiple lanes; paired-end (R1 and R2)

text: paired end

text: The last base needs to be removed from the end of Read 1; The first base needs to be removed from the beginning of Read 2

characteristic: months

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

characteristic: Submitter Id

text: human

text: Patient 01; first primary tumor sample (TU1); multiple lanes; paired-end (R1 and R2)

characteristic: description

text: paired end

text: Homo sapiens

characteristic: organism

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN

characteristic: title


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 01; second primary tumor sample (TU2); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 02; matched normal sample (NO); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 02; first primary tumor sample (TU1); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 02; second primary tumor sample (TU2); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 03; matched normal sample (NO); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 03; first primary tumor sample (TU1); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 03; second primary tumor sample (TU2); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 04; matched normal sample (NO); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 04; first primary tumor sample (TU1); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 04; second primary tumor sample (TU2); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 05; matched normal sample (NO); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 05; first primary tumor sample (TU1); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 05; second primary tumor sample (TU2); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 06; matched normal sample (NO); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 06; first primary tumor sample (TU1); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 06; second primary tumor sample (TU2); multiple lanes; paired-end (R1 and R2)

text: paired end

text: The last base needs to be removed from the end of Read 1; The first base needs to be removed from the beginning of Read 2

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 07; matched normal sample (NO); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 07; first primary tumor sample (TU1); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 07; second primary tumor sample (TU2); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 08; matched normal sample (NO); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 08; first primary tumor sample (TU1); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 08; second primary tumor sample (TU2); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 09; matched normal sample (NO); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 09; first primary tumor sample (TU1); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 09; second primary tumor sample (TU2); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 10; matched normal sample (NO); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 10; first primary tumor sample (TU1); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 10; second primary tumor sample (TU2); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 11; matched normal sample (NO); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 11; first primary tumor sample (TU1); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 11; second primary tumor sample (TU2); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 12; matched normal sample (NO); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 12; first primary tumor sample (TU1); multiple lanes; paired-end (R1 and R2)

text: paired end

text: The last base needs to be removed from the end of Read 1; The first base needs to be removed from the beginning of Read 2

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 12; second primary tumor sample (TU2); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 13; matched normal sample (NO); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 13; first primary tumor sample (TU1); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 13; second primary tumor sample (TU2); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 14; matched normal sample (NO); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 14; first primary tumor sample (TU1); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 14; second primary tumor sample (TU2); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FROZEN


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 15; matched normal sample (NO); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 15; first primary tumor sample (TU1); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 15; second primary tumor sample (TU2); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 16; matched normal sample (NO); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 16; first primary tumor sample (TU1); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 16; second primary tumor sample (TU2); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 17; matched normal sample (NO); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 17; first primary tumor sample (TU1); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 17; second primary tumor sample (TU2); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 18; matched normal sample (NO); multiple lanes; paired-end (R1 and R2)

text: paired end

text: The last base needs to be removed from the end of Read 1; The first base needs to be removed from the beginning of Read 2

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 18; first primary tumor sample (TU1); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 18; second primary tumor sample (TU2); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 19; matched normal sample (NO); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 19; first primary tumor sample (TU1); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 19; second primary tumor sample (TU2); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 20; matched normal sample (NO); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 20; first primary tumor sample (TU1); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 20; second primary tumor sample (TU2); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 21; matched normal sample (NO); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 21; first primary tumor sample (TU1); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 21; second primary tumor sample (TU2); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 22; matched normal sample (NO); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 22; first primary tumor sample (TU1); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 22; second primary tumor sample (TU2); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 23; matched normal sample (NO); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 23; first primary tumor sample (TU1); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 23; second primary tumor sample (TU2); multiple lanes; paired-end (R1 and R2)

text: paired end

text: The last base needs to be removed from the end of Read 1; The first base needs to be removed from the beginning of Read 2

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 24; matched normal sample (NO); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 24; first primary tumor sample (TU1); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 24; second primary tumor sample (TU2); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 25; matched normal sample (NO); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 25; first primary tumor sample (TU1); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 25; second primary tumor sample (TU2); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 26; matched normal sample (NO); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 26; first primary tumor sample (TU1); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 26; second primary tumor sample (TU2); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 27; matched normal sample (NO); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 27; first primary tumor sample (TU1); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 27; second primary tumor sample (TU2); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 28; matched normal sample (NO); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 28; first primary tumor sample (TU1); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 28; second primary tumor sample (TU2); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE


text: ETH ZURICH D-BSSE

text: public

text: human

text: Patient 29; matched normal sample (NO); multiple lanes; paired-end (R1 and R2)

text: paired end

text: Homo sapiens

text: GAGATCGGAAGAGCACACGTCTGAACTCCAGTCA

text: AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

text: genomic DNA

text: Homo sapiens

text: Illumina HiSeq 2500

text: Agilent Haloplex HS

text: FFPE