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text: Protocols: The organs were dissected from 16 developmental stages (starting at e11 until P112). Until e13 the dissected ‘brain’ samples correspond to the whole brain, and from e14 onwards they correspond to the cerebral hemispheres (without the olfactory bulbs). Early ‘cerebellum’ samples correspond to the prepontine hindbrain-enriched brain region (until ~ e18) and from then onwards only to the cerebellum. RNA was extracted using the RNeasy protocol from QIAGEN. RNeasy Micro columns were used to extract RNA from small (< 5 mg) or fibrous samples and RNeasy Mini columns were used to extract RNA from larger samples. The tissues were homogenized in RLT buffer supplemented with 40 mM dithiothreitol (DTT) or QIAzol. The RNA-seq libraries were created using the TruSeq Stranded mRNA LT Sample Prep Kit (Illumina).

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text: E-MTAB-6811:2288sTS.Rat.Brain.0dpb.Female

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

characteristic: organism

text: Rattus norvegicus

text: forebrain

text: Rattus norvegicus

text: female

text: Holtzman SD


text: The University of Heidelberg

text: public

characteristic: INSDC status

text: E-MTAB-6811:2289sTS.Rat.Cerebellum.0dpb.Female

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: hindbrain

characteristic: organism part

text: Rattus norvegicus

text: female

text: Holtzman SD


text: The University of Heidelberg

text: public

text: E-MTAB-6811:2291sTS.Rat.Testis.0dpb.Male

text: ArrayExpress

text: Norway rat

characteristic: common name

characteristic: description

text: postnatal

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: testis

text: Rattus norvegicus

text: male

characteristic: sex

text: Holtzman SD


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: The University of Heidelberg

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-6811:2292sTS.Rat.Brain.0dpb.Female

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: forebrain

text: Rattus norvegicus

text: female

text: Holtzman SD

characteristic: strain


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The University of Heidelberg

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-6811:2293sTS.Rat.Cerebellum.0dpb.Female

text: ArrayExpress

text: Norway rat

text: Protocols: The organs were dissected from 16 developmental stages (starting at e11 until P112). Until e13 the dissected ‘brain’ samples correspond to the whole brain, and from e14 onwards they correspond to the cerebral hemispheres (without the olfactory bulbs). Early ‘cerebellum’ samples correspond to the prepontine hindbrain-enriched brain region (until ~ e18) and from then onwards only to the cerebellum. RNA was extracted using the RNeasy protocol from QIAGEN. RNeasy Micro columns were used to extract RNA from small (< 5 mg) or fibrous samples and RNeasy Mini columns were used to extract RNA from larger samples. The tissues were homogenized in RLT buffer supplemented with 40 mM dithiothreitol (DTT) or QIAzol. The RNA-seq libraries were created using the TruSeq Stranded mRNA LT Sample Prep Kit (Illumina).

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: hindbrain

text: Rattus norvegicus

text: female

text: Holtzman SD

characteristic: title


text: The University of Heidelberg

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

characteristic: organism

text: Rattus norvegicus

text: liver

text: Rattus norvegicus

text: male

text: Holtzman SD


text: The University of Heidelberg

text: public

text: E-MTAB-6811:2560sTS.Rat.Liver.0dpb.Female

text: ArrayExpress

text: Norway rat

characteristic: common name

characteristic: description

text: postnatal

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: liver

characteristic: organism part

text: Rattus norvegicus

text: female

text: Holtzman SD


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: The University of Heidelberg

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-6811:2706sTS.Rat.Heart.0dpb.Female

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: heart

text: Rattus norvegicus

text: female

characteristic: sex

text: Holtzman SD


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The University of Heidelberg

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-6811:2707sTS.Rat.Kidney.0dpb.Female

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: kidney

text: Rattus norvegicus

text: female

text: Holtzman SD

characteristic: strain


text: The University of Heidelberg

text: public

characteristic: INSDC status

text: E-MTAB-6811:2709sTS.Rat.Kidney.0dpb.Male

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: kidney

text: Rattus norvegicus

text: male

text: Holtzman SD

characteristic: title


text: The University of Heidelberg

text: public

text: E-MTAB-6811:2710sTS.Rat.Heart.0dpb.Female

text: ArrayExpress

text: Norway rat

characteristic: common name

characteristic: description

text: postnatal

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Rattus norvegicus

characteristic: organism

text: Rattus norvegicus

text: heart

text: Rattus norvegicus

text: female

text: Holtzman SD


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: The University of Heidelberg

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-6811:2711sTS.Rat.Kidney.0dpb.Female

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: kidney

characteristic: organism part

text: Rattus norvegicus

text: female

text: Holtzman SD


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The University of Heidelberg

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-6811:5051sTS.Rat.Liver.0dpb.Female

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: liver

text: Rattus norvegicus

text: female

characteristic: sex

text: Holtzman SD


text: The University of Heidelberg

text: public

characteristic: INSDC status

text: E-MTAB-6811:5348sTS.Rat.Cerebellum.0dpb.Male

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: hindbrain

text: Rattus norvegicus

text: male

text: Holtzman SD

characteristic: strain


text: The University of Heidelberg

text: public

text: E-MTAB-6811:4898sTS.Rat.Brain.3dpb.Female

text: ArrayExpress

text: Norway rat

characteristic: common name

characteristic: description

text: postnatal

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: forebrain

text: Rattus norvegicus

text: female

text: Holtzman SD

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: The University of Heidelberg

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-6811:4899sTS.Rat.Cerebellum.3dpb.Female

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

characteristic: organism

text: Rattus norvegicus

text: hindbrain

text: Rattus norvegicus

text: female

text: Holtzman SD


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The University of Heidelberg

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-6811:4900sTS.Rat.Heart.3dpb.Female

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: heart

characteristic: organism part

text: Rattus norvegicus

text: female

text: Holtzman SD


text: The University of Heidelberg

text: public

characteristic: INSDC status

text: E-MTAB-6811:4901sTS.Rat.Kidney.3dpb.Female

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: kidney

text: Rattus norvegicus

text: female

characteristic: sex

text: Holtzman SD


text: The University of Heidelberg

text: public

text: E-MTAB-6811:4902sTS.Rat.Liver.3dpb.Female

text: ArrayExpress

text: Norway rat

characteristic: common name

characteristic: description

text: postnatal

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: liver

text: Rattus norvegicus

text: female

text: Holtzman SD

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: The University of Heidelberg

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-6811:4903sTS.Rat.Ovary.3dpb.Female

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: ovary

text: Rattus norvegicus

text: female

text: Holtzman SD

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The University of Heidelberg

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

characteristic: organism

text: Rattus norvegicus

text: forebrain

text: Rattus norvegicus

text: male

text: Holtzman SD


text: The University of Heidelberg

text: public

characteristic: INSDC status

text: E-MTAB-6811:4905sTS.Rat.Cerebellum.3dpb.Male

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: hindbrain

characteristic: organism part

text: Rattus norvegicus

text: male

text: Holtzman SD


text: The University of Heidelberg

text: public

text: ArrayExpress

text: Norway rat

characteristic: common name

characteristic: description

text: postnatal

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: heart

text: Rattus norvegicus

text: male

characteristic: sex

text: Holtzman SD


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: The University of Heidelberg

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-6811:4907sTS.Rat.Kidney.3dpb.Male

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: kidney

text: Rattus norvegicus

text: male

text: Holtzman SD

characteristic: strain


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The University of Heidelberg

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ArrayExpress

text: Norway rat

text: Protocols: The organs were dissected from 16 developmental stages (starting at e11 until P112). Until e13 the dissected ‘brain’ samples correspond to the whole brain, and from e14 onwards they correspond to the cerebral hemispheres (without the olfactory bulbs). Early ‘cerebellum’ samples correspond to the prepontine hindbrain-enriched brain region (until ~ e18) and from then onwards only to the cerebellum. RNA was extracted using the RNeasy protocol from QIAGEN. RNeasy Micro columns were used to extract RNA from small (< 5 mg) or fibrous samples and RNeasy Mini columns were used to extract RNA from larger samples. The tissues were homogenized in RLT buffer supplemented with 40 mM dithiothreitol (DTT) or QIAzol. The RNA-seq libraries were created using the TruSeq Stranded mRNA LT Sample Prep Kit (Illumina).

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: liver

text: Rattus norvegicus

text: male

text: Holtzman SD

characteristic: title


text: The University of Heidelberg

text: public

characteristic: INSDC status

text: E-MTAB-6811:4909sTS.Rat.Testis.3dpb.Male

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

characteristic: organism

text: Rattus norvegicus

text: testis

text: Rattus norvegicus

text: male

text: Holtzman SD


text: The University of Heidelberg

text: public

text: E-MTAB-6811:4959sTS.Rat.Cerebellum.3dpb.Male

text: ArrayExpress

text: Norway rat

characteristic: common name

characteristic: description

text: postnatal

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: hindbrain

characteristic: organism part

text: Rattus norvegicus

text: male

text: Holtzman SD


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: The University of Heidelberg

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-6811:4962sTS.Rat.Kidney.3dpb.Male

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: kidney

text: Rattus norvegicus

text: male

characteristic: sex

text: Holtzman SD


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The University of Heidelberg

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-6811:4963sTS.Rat.Testis.3dpb.Male

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: testis

text: Rattus norvegicus

text: male

text: Holtzman SD

characteristic: strain


text: The University of Heidelberg

text: public

characteristic: INSDC status

text: E-MTAB-6811:4964sTS.Rat.Brain.3dpb.Female

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: forebrain

text: Rattus norvegicus

text: female

text: Holtzman SD

characteristic: title


text: The University of Heidelberg

text: public

text: E-MTAB-6811:4965sTS.Rat.Cerebellum.3dpb.Female

text: ArrayExpress

text: Norway rat

characteristic: common name

characteristic: description

text: postnatal

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Rattus norvegicus

characteristic: organism

text: Rattus norvegicus

text: hindbrain

text: Rattus norvegicus

text: female

text: Holtzman SD


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: The University of Heidelberg

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-6811:4966sTS.Rat.Heart.3dpb.Female

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: heart

characteristic: organism part

text: Rattus norvegicus

text: female

text: Holtzman SD


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The University of Heidelberg

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-6811:4967sTS.Rat.Liver.3dpb.Female

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: liver

text: Rattus norvegicus

text: female

characteristic: sex

text: Holtzman SD


text: The University of Heidelberg

text: public

characteristic: INSDC status

text: E-MTAB-6811:4968sTS.Rat.Kidney.3dpb.Female

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: kidney

text: Rattus norvegicus

text: female

text: Holtzman SD

characteristic: strain


text: The University of Heidelberg

text: public

text: E-MTAB-6811:4969sTS.Rat.Ovary.3dpb.Female

text: ArrayExpress

text: Norway rat

characteristic: common name

characteristic: description

text: postnatal

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: ovary

text: Rattus norvegicus

text: female

text: Holtzman SD

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: The University of Heidelberg

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-6811:2294sTS.Rat.Brain.1wpb.Female

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

characteristic: organism

text: Rattus norvegicus

text: forebrain

text: Rattus norvegicus

text: female

text: Holtzman SD


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The University of Heidelberg

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-6811:2295sTS.Rat.Cerebellum.1wpb.Female

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: hindbrain

characteristic: organism part

text: Rattus norvegicus

text: female

text: Holtzman SD


text: The University of Heidelberg

text: public

characteristic: INSDC status

text: E-MTAB-6811:2296sTS.Rat.Ovary.1wpb.Female

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: ovary

text: Rattus norvegicus

text: female

characteristic: sex

text: Holtzman SD


text: The University of Heidelberg

text: public

text: E-MTAB-6811:2298sTS.Rat.Brain.1wpb.Female

text: ArrayExpress

text: Norway rat

characteristic: common name

characteristic: description

text: postnatal

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: forebrain

text: Rattus norvegicus

text: female

text: Holtzman SD

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: The University of Heidelberg

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-6811:2299sTS.Rat.Cerebellum.1wpb.Female

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: hindbrain

text: Rattus norvegicus

text: female

text: Holtzman SD

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The University of Heidelberg

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-6811:2300sTS.Rat.Ovary.1wpb.Female

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

characteristic: organism

text: Rattus norvegicus

text: ovary

text: Rattus norvegicus

text: female

text: Holtzman SD


text: The University of Heidelberg

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Norway rat

text: Protocols: The organs were dissected from 16 developmental stages (starting at e11 until P112). Until e13 the dissected ‘brain’ samples correspond to the whole brain, and from e14 onwards they correspond to the cerebral hemispheres (without the olfactory bulbs). Early ‘cerebellum’ samples correspond to the prepontine hindbrain-enriched brain region (until ~ e18) and from then onwards only to the cerebellum. RNA was extracted using the RNeasy protocol from QIAGEN. RNeasy Micro columns were used to extract RNA from small (< 5 mg) or fibrous samples and RNeasy Mini columns were used to extract RNA from larger samples. The tissues were homogenized in RLT buffer supplemented with 40 mM dithiothreitol (DTT) or QIAzol. The RNA-seq libraries were created using the TruSeq Stranded mRNA LT Sample Prep Kit (Illumina).

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: forebrain

characteristic: organism part

text: Rattus norvegicus

text: male

text: Holtzman SD


text: The University of Heidelberg

text: public

text: E-MTAB-6811:2303sTS.Rat.Cerebellum.1wpb.Male

text: ArrayExpress

text: Norway rat

characteristic: common name

characteristic: description

text: postnatal

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: hindbrain

text: Rattus norvegicus

text: male

characteristic: sex

text: Holtzman SD


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: The University of Heidelberg

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-6811:2304sTS.Rat.Testis.1wpb.Male

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: testis

text: Rattus norvegicus

text: male

text: Holtzman SD

characteristic: strain


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The University of Heidelberg

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-6811:2361sTS.Rat.Cerebellum.1wpb.Male

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: hindbrain

text: Rattus norvegicus

text: male

text: Holtzman SD

characteristic: title


text: The University of Heidelberg

text: public

characteristic: INSDC status

text: E-MTAB-6811:2362sTS.Rat.Testis.1wpb.Male

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

characteristic: organism

text: Rattus norvegicus

text: testis

text: Rattus norvegicus

text: male

text: Holtzman SD


text: The University of Heidelberg

text: public

text: E-MTAB-6811:2521sTS.Rat.Liver.1wpb.Female

text: ArrayExpress

text: Norway rat

characteristic: common name

characteristic: description

text: postnatal

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Rattus norvegicus

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text: liver

characteristic: organism part

text: Rattus norvegicus

text: female

text: Holtzman SD


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: The University of Heidelberg

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-6811:2522sTS.Rat.Liver.1wpb.Female

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: liver

text: Rattus norvegicus

text: female

characteristic: sex

text: Holtzman SD


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The University of Heidelberg

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: liver

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text: male

text: Holtzman SD

characteristic: strain


text: The University of Heidelberg

text: public

characteristic: INSDC status

text: E-MTAB-6811:2724sTS.Rat.Heart.1wpb.Female

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: heart

text: Rattus norvegicus

text: female

text: Holtzman SD

characteristic: title


text: The University of Heidelberg

text: public

text: E-MTAB-6811:2725sTS.Rat.Kidney.1wpb.Female

text: ArrayExpress

text: Norway rat

characteristic: common name

characteristic: description

text: postnatal

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Rattus norvegicus

characteristic: organism

text: Rattus norvegicus

text: kidney

text: Rattus norvegicus

text: female

text: Holtzman SD


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: The University of Heidelberg

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-6811:2733sTS.Rat.Kidney.1wpb.Female

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: kidney

characteristic: organism part

text: Rattus norvegicus

text: female

text: Holtzman SD


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The University of Heidelberg

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: heart

text: Rattus norvegicus

text: male

characteristic: sex

text: Holtzman SD


text: The University of Heidelberg

text: public

characteristic: INSDC status

text: E-MTAB-6811:2735sTS.Rat.Kidney.1wpb.Male

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: kidney

text: Rattus norvegicus

text: male

text: Holtzman SD

characteristic: strain


text: The University of Heidelberg

text: public

text: E-MTAB-6811:2737sTS.Rat.Kidney.1wpb.Male

text: ArrayExpress

text: Norway rat

characteristic: common name

characteristic: description

text: postnatal

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: kidney

text: Rattus norvegicus

text: male

text: Holtzman SD

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: The University of Heidelberg

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-6811:2336sTS.Rat.Brain.2wpb.Female

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

characteristic: organism

text: Rattus norvegicus

text: forebrain

text: Rattus norvegicus

text: female

text: Holtzman SD


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The University of Heidelberg

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-6811:2337sTS.Rat.Cerebellum.2wpb.Female

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: hindbrain

characteristic: organism part

text: Rattus norvegicus

text: female

text: Holtzman SD


text: The University of Heidelberg

text: public

characteristic: INSDC status

text: E-MTAB-6811:2338sTS.Rat.Ovary.2wpb.Female

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: ovary

text: Rattus norvegicus

text: female

characteristic: sex

text: Holtzman SD


text: The University of Heidelberg

text: public

text: E-MTAB-6811:2339sTS.Rat.Brain.2wpb.Female

text: ArrayExpress

text: Norway rat

characteristic: common name

characteristic: description

text: postnatal

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: forebrain

text: Rattus norvegicus

text: female

text: Holtzman SD

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: The University of Heidelberg

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-6811:2340sTS.Rat.Cerebellum.2wpb.Female

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: hindbrain

text: Rattus norvegicus

text: female

text: Holtzman SD

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The University of Heidelberg

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-6811:2341sTS.Rat.Ovary.2wpb.Female

text: ArrayExpress

text: Norway rat

text: Protocols: The organs were dissected from 16 developmental stages (starting at e11 until P112). Until e13 the dissected ‘brain’ samples correspond to the whole brain, and from e14 onwards they correspond to the cerebral hemispheres (without the olfactory bulbs). Early ‘cerebellum’ samples correspond to the prepontine hindbrain-enriched brain region (until ~ e18) and from then onwards only to the cerebellum. RNA was extracted using the RNeasy protocol from QIAGEN. RNeasy Micro columns were used to extract RNA from small (< 5 mg) or fibrous samples and RNeasy Mini columns were used to extract RNA from larger samples. The tissues were homogenized in RLT buffer supplemented with 40 mM dithiothreitol (DTT) or QIAzol. The RNA-seq libraries were created using the TruSeq Stranded mRNA LT Sample Prep Kit (Illumina).

text: postnatal

text: wild type genotype

text: Rattus norvegicus

characteristic: organism

text: Rattus norvegicus

text: ovary

text: Rattus norvegicus

text: female

text: Holtzman SD


text: The University of Heidelberg

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: forebrain

characteristic: organism part

text: Rattus norvegicus

text: male

text: Holtzman SD


text: The University of Heidelberg

text: public

text: E-MTAB-6811:2343sTS.Rat.Cerebellum.2wpb.Male

text: ArrayExpress

text: Norway rat

characteristic: common name

characteristic: description

text: postnatal

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: hindbrain

text: Rattus norvegicus

text: male

characteristic: sex

text: Holtzman SD


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: The University of Heidelberg

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-6811:2344sTS.Rat.Testis.2wpb.Male

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: testis

text: Rattus norvegicus

text: male

text: Holtzman SD

characteristic: strain


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The University of Heidelberg

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-6811:2346sTS.Rat.Cerebellum.2wpb.Male

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: hindbrain

text: Rattus norvegicus

text: male

text: Holtzman SD

characteristic: title


text: The University of Heidelberg

text: public

characteristic: INSDC status

text: E-MTAB-6811:2347sTS.Rat.Testis.2wpb.Male

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

characteristic: organism

text: Rattus norvegicus

text: testis

text: Rattus norvegicus

text: male

text: Holtzman SD


text: The University of Heidelberg

text: public

text: E-MTAB-6811:2525sTS.Rat.Liver.2wpb.Female

text: ArrayExpress

text: Norway rat

characteristic: common name

characteristic: description

text: postnatal

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: liver

characteristic: organism part

text: Rattus norvegicus

text: female

text: Holtzman SD


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: The University of Heidelberg

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-6811:2526sTS.Rat.Liver.2wpb.Female

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: liver

text: Rattus norvegicus

text: female

characteristic: sex

text: Holtzman SD


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The University of Heidelberg

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: liver

text: Rattus norvegicus

text: male

text: Holtzman SD

characteristic: strain


text: The University of Heidelberg

text: public

characteristic: INSDC status

text: E-MTAB-6811:2727sTS.Rat.Heart.2wpb.Female

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: heart

text: Rattus norvegicus

text: female

text: Holtzman SD

characteristic: title


text: The University of Heidelberg

text: public

text: E-MTAB-6811:2728sTS.Rat.Heart.2wpb.Female

text: ArrayExpress

text: Norway rat

characteristic: common name

characteristic: description

text: postnatal

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Rattus norvegicus

characteristic: organism

text: Rattus norvegicus

text: heart

text: Rattus norvegicus

text: female

text: Holtzman SD


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: The University of Heidelberg

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-6811:2729sTS.Rat.Kidney.2wpb.Female

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: kidney

characteristic: organism part

text: Rattus norvegicus

text: female

text: Holtzman SD


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The University of Heidelberg

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-6811:2730sTS.Rat.Kidney.2wpb.Male

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: kidney

text: Rattus norvegicus

text: male

characteristic: sex

text: Holtzman SD


text: The University of Heidelberg

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: heart

text: Rattus norvegicus

text: male

text: Holtzman SD

characteristic: strain


text: The University of Heidelberg

text: public

text: E-MTAB-6811:2756sTS.Rat.Kidney.2wpb.Female

text: ArrayExpress

text: Norway rat

characteristic: common name

characteristic: description

text: postnatal

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: kidney

text: Rattus norvegicus

text: female

text: Holtzman SD

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: The University of Heidelberg

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-6811:2758sTS.Rat.Kidney.2wpb.Male

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

characteristic: organism

text: Rattus norvegicus

text: kidney

text: Rattus norvegicus

text: male

text: Holtzman SD


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The University of Heidelberg

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-6811:1968sTS.Rat.Cerebellum.6wpb.Male

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: hindbrain

characteristic: organism part

text: Rattus norvegicus

text: male

text: Holtzman SD


text: The University of Heidelberg

text: public

characteristic: INSDC status

text: E-MTAB-6811:1970sTS.Rat.Testis.6wpb.Male

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: testis

text: Rattus norvegicus

text: male

characteristic: sex

text: Holtzman SD


text: The University of Heidelberg

text: public

text: ArrayExpress

text: Norway rat

characteristic: common name

characteristic: description

text: postnatal

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: forebrain

text: Rattus norvegicus

text: male

text: Holtzman SD

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: The University of Heidelberg

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-6811:1972sTS.Rat.Cerebellum.6wpb.Male

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: hindbrain

text: Rattus norvegicus

text: male

text: Holtzman SD

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The University of Heidelberg

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-6811:1974sTS.Rat.Testis.6wpb.Male

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

characteristic: organism

text: Rattus norvegicus

text: testis

text: Rattus norvegicus

text: male

text: Holtzman SD


text: The University of Heidelberg

text: public

characteristic: INSDC status

text: E-MTAB-6811:1975sTS.Rat.Brain.6wpb.Female

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Norway rat

text: Protocols: The organs were dissected from 16 developmental stages (starting at e11 until P112). Until e13 the dissected ‘brain’ samples correspond to the whole brain, and from e14 onwards they correspond to the cerebral hemispheres (without the olfactory bulbs). Early ‘cerebellum’ samples correspond to the prepontine hindbrain-enriched brain region (until ~ e18) and from then onwards only to the cerebellum. RNA was extracted using the RNeasy protocol from QIAGEN. RNeasy Micro columns were used to extract RNA from small (< 5 mg) or fibrous samples and RNeasy Mini columns were used to extract RNA from larger samples. The tissues were homogenized in RLT buffer supplemented with 40 mM dithiothreitol (DTT) or QIAzol. The RNA-seq libraries were created using the TruSeq Stranded mRNA LT Sample Prep Kit (Illumina).

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: forebrain

characteristic: organism part

text: Rattus norvegicus

text: female

text: Holtzman SD


text: The University of Heidelberg

text: public

text: E-MTAB-6811:2285sTS.Rat.Cerebellum.6wpb.Female

text: ArrayExpress

text: Norway rat

characteristic: common name

characteristic: description

text: postnatal

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: hindbrain

text: Rattus norvegicus

text: female

characteristic: sex

text: Holtzman SD


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: The University of Heidelberg

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-6811:2286sTS.Rat.Ovary.6wpb.Female

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: ovary

text: Rattus norvegicus

text: female

text: Holtzman SD

characteristic: strain


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The University of Heidelberg

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-6811:2287sTS.Rat.Liver.6wpb.Female

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: liver

text: Rattus norvegicus

text: female

text: Holtzman SD

characteristic: title


text: The University of Heidelberg

text: public

characteristic: INSDC status

text: E-MTAB-6811:2363sTS.Rat.Brain.6wpb.Female

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

characteristic: organism

text: Rattus norvegicus

text: forebrain

text: Rattus norvegicus

text: female

text: Holtzman SD


text: The University of Heidelberg

text: public

text: E-MTAB-6811:2364sTS.Rat.Cerebellum.6wpb.Female

text: ArrayExpress

text: Norway rat

characteristic: common name

characteristic: description

text: postnatal

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: hindbrain

characteristic: organism part

text: Rattus norvegicus

text: female

text: Holtzman SD


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: The University of Heidelberg

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-6811:2365sTS.Rat.Ovary.6wpb.Female

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: ovary

text: Rattus norvegicus

text: female

characteristic: sex

text: Holtzman SD


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The University of Heidelberg

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-6811:2366sTS.Rat.Liver.6wpb.Female

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: liver

text: Rattus norvegicus

text: female

text: Holtzman SD

characteristic: strain


text: The University of Heidelberg

text: public

characteristic: INSDC status

text: E-MTAB-6811:2738sTS.Rat.Heart.6wpb.Female

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: heart

text: Rattus norvegicus

text: female

text: Holtzman SD

characteristic: title


text: The University of Heidelberg

text: public

text: E-MTAB-6811:2739sTS.Rat.Kidney.6wpb.Female

text: ArrayExpress

text: Norway rat

characteristic: common name

characteristic: description

text: postnatal

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Rattus norvegicus

characteristic: organism

text: Rattus norvegicus

text: kidney

text: Rattus norvegicus

text: female

text: Holtzman SD


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: The University of Heidelberg

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-6811:2740sTS.Rat.Heart.6wpb.Female

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: heart

characteristic: organism part

text: Rattus norvegicus

text: female

text: Holtzman SD


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The University of Heidelberg

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-6811:2741sTS.Rat.Kidney.6wpb.Female

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: kidney

text: Rattus norvegicus

text: female

characteristic: sex

text: Holtzman SD


text: The University of Heidelberg

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: heart

text: Rattus norvegicus

text: male

text: Holtzman SD

characteristic: strain


text: The University of Heidelberg

text: public

text: E-MTAB-6811:2743sTS.Rat.Kidney.6wpb.Male

text: ArrayExpress

text: Norway rat

characteristic: common name

characteristic: description

text: postnatal

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: kidney

text: Rattus norvegicus

text: male

text: Holtzman SD

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: The University of Heidelberg

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-6811:2856sTS.Rat.Kidney.6wpb.Male

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

characteristic: organism

text: Rattus norvegicus

text: kidney

text: Rattus norvegicus

text: male

text: Holtzman SD


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The University of Heidelberg

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-6811:2348sTS.Rat.Brain.16wpb.Female

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: forebrain

characteristic: organism part

text: Rattus norvegicus

text: female

text: Holtzman SD


text: The University of Heidelberg

text: public

characteristic: INSDC status

text: E-MTAB-6811:2349sTS.Rat.Cerebellum.16wpb.Female

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: hindbrain

text: Rattus norvegicus

text: female

characteristic: sex

text: Holtzman SD


text: The University of Heidelberg

text: public

text: E-MTAB-6811:2350sTS.Rat.Ovary.16wpb.Female

text: ArrayExpress

text: Norway rat

characteristic: common name

characteristic: description

text: postnatal

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: ovary

text: Rattus norvegicus

text: female

text: Holtzman SD

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: The University of Heidelberg

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-6811:2351sTS.Rat.Liver.16wpb.Female

text: ArrayExpress

text: Norway rat

text: Protocols: The organs were dissected from 16 developmental stages (starting at e11 until P112). Until e13 the dissected ‘brain’ samples correspond to the whole brain, and from e14 onwards they correspond to the cerebral hemispheres (without the olfactory bulbs). Early ‘cerebellum’ samples correspond to the prepontine hindbrain-enriched brain region (until ~ e18) and from then onwards only to the cerebellum. RNA was extracted using the RNeasy protocol from QIAGEN. RNeasy Micro columns were used to extract RNA from small (< 5 mg) or fibrous samples and RNeasy Mini columns were used to extract RNA from larger samples. The tissues were homogenized in RLT buffer supplemented with 40 mM dithiothreitol (DTT) or QIAzol. The RNA-seq libraries were created using the TruSeq Stranded mRNA LT Sample Prep Kit (Illumina).

text: postnatal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: liver

text: Rattus norvegicus

text: female

text: Holtzman SD

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The University of Heidelberg

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-6811:2352sTS.Rat.Brain.16wpb.Female

text: ArrayExpress

text: Norway rat

text: postnatal

text: wild type genotype

text: Rattus norvegicus

characteristic: organism

text: Rattus norvegicus

text: forebrain

text: Rattus norvegicus

text: female

text: Holtzman SD