characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

characteristic: cage number

text: In Chamber

text: 2017-11-24 10:00

text: Mouse 101 stool collection 18 of 20

characteristic: description

text: HFD

characteristic: diet

text: TRUE

characteristic: dob

characteristic: elevation

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: 10 weeks

text: IHC

characteristic: exposure type

text: ApoE KO

characteristic: genotype

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: Adult

text: Mus musculus

text: Mouse 101

text: weeks

text: g

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: feces

text: mouse gut metagenome

text: male

text: Not provided

text: 10 week IHC

text: Missing: Not provided


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: In Chamber

text: New bag of food

text: 2017-11-28 10:00

text: Mouse 101 stool collection 19 of 20

text: HFD

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: 10 weeks

text: IHC

text: ApoE KO

text: USA:CA:San Diego

text: UBERON:feces

characteristic: host body habitat

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

text: Mouse 101

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: weeks

text: g

characteristic: latitude

characteristic: longitude

characteristic: mouse number

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

text: 10 week IHC

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

characteristic: cage number

text: In Chamber

text: New bag of food

text: 2017-09-29 10:00

text: Mouse 101 stool collection 2 of 20

characteristic: description

text: HFD

characteristic: diet

text: TRUE

characteristic: dob

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: 10 weeks

text: IHC

characteristic: exposure type

text: ApoE KO

characteristic: genotype

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: adult

text: Mus musculus

text: Mouse 101

text: weeks

text: g

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: feces

text: mouse gut metagenome

text: male

text: 10 week IHC


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: In Chamber

text: 2017-12-01 10:00

text: Mouse 101 stool collection 20 of 20

text: HFD

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: 10 weeks

text: IHC

text: ApoE KO

text: USA:CA:San Diego

text: UBERON:feces

characteristic: host body habitat

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

text: Mouse 101

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: weeks

text: g

characteristic: latitude

characteristic: longitude

characteristic: mouse number

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: title

text: 10 week IHC


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

characteristic: cage number

text: In Chamber

text: Put Nyla bones in cage

text: 2017-10-03 10:00

text: Mouse 101 stool collection 3 of 20

characteristic: description

text: HFD

characteristic: diet

text: TRUE

characteristic: dob

characteristic: elevation

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: 10 weeks

text: IHC

characteristic: exposure type

text: ApoE KO

characteristic: genotype

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: Adult

text: Mus musculus

text: Mouse 101

text: weeks

text: g

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: feces

text: mouse gut metagenome

text: male

text: Not provided

characteristic: timepoint

text: 10 week IHC

text: Missing: Not provided

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: In Chamber

text: 2017-10-06 10:00

text: Mouse 101 stool collection 4 of 20

text: HFD

text: TRUE

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: 10 weeks

text: IHC

text: ApoE KO

text: USA:CA:San Diego

text: UBERON:feces

characteristic: host body habitat

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: Adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

text: Mouse 101

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: weeks

text: g

characteristic: latitude

characteristic: longitude

characteristic: mouse number

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

text: Not provided

characteristic: title

text: 10 week IHC

text: Missing: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: anonymized name

characteristic: cage number

text: In Chamber

text: 2017-10-10 10:00

text: Mouse 101 stool collection 5 of 20

characteristic: description

text: HFD

characteristic: diet

text: TRUE

characteristic: dob

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: 10 weeks

text: IHC

characteristic: exposure type

text: ApoE KO

characteristic: genotype

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: adult

text: Mus musculus

text: Mouse 101

text: weeks

text: g

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: feces

text: mouse gut metagenome

text: male

text: 10 week IHC


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: In Chamber

text: New bag of food

text: 2017-10-13 10:00

text: Mouse 101 stool collection 6 of 20

text: HFD

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: 10 weeks

text: IHC

text: ApoE KO

text: USA:CA:San Diego

text: UBERON:feces

characteristic: host body habitat

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

text: Mouse 101

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: weeks

text: g

characteristic: latitude

characteristic: longitude

characteristic: mouse number

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: title

text: 10 week IHC


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: anonymized name

characteristic: cage number

text: In Chamber

text: 2017-10-17 10:00

text: Mouse 101 stool collection 7 of 20

characteristic: description

text: HFD

characteristic: diet

text: TRUE

characteristic: dob

characteristic: elevation

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: 10 weeks

text: IHC

characteristic: exposure type

text: Orit only for sample collection

text: ApoE KO

characteristic: genotype

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: Adult

text: Mus musculus

text: Mouse 101

text: weeks

text: g

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: feces

text: mouse gut metagenome

text: male

text: Not provided

characteristic: timepoint

text: 10 week IHC

text: Missing: Not provided

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: In Chamber

text: 2017-10-20 10:00

text: Mouse 101 stool collection 8 of 20

text: HFD

text: TRUE

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: 10 weeks

text: IHC

text: ApoE KO

text: USA:CA:San Diego

text: UBERON:feces

characteristic: host body habitat

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: Adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

text: Mouse 101

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: weeks

text: g

characteristic: latitude

characteristic: longitude

characteristic: mouse number

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

text: Not provided

characteristic: title

text: 10 week IHC

text: Missing: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: anonymized name

characteristic: cage number

text: In Chamber

text: 2017-10-24 10:00

text: Mouse 101 stool collection 9 of 20

characteristic: description

text: HFD

characteristic: diet

text: TRUE

characteristic: dob

characteristic: elevation

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: 10 weeks

text: IHC

characteristic: exposure type

text: ApoE KO

characteristic: genotype

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: Adult

text: Mus musculus

text: Mouse 101

text: weeks

text: g

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: feces

text: mouse gut metagenome

text: male

text: Not provided

characteristic: timepoint

text: 10 week IHC

text: Missing: Not provided

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Not provided

text: In Chamber

text: 2017-12-04 10:30

text: Mouse 101 tooth collection at terminal point

text: HFD

text: TRUE

text: Host-asssociated

text: Animal-associated

text: Animal corpus

text: urban biome

text: animal-associated habitat

text: host-associated

text: organic material

text: 10 weeks

text: IHC

text: One tube for microbiome and metabolome

text: ApoE KO

text: USA:CA:San Diego

text: UBERON:oral cavity

characteristic: host body habitat

text: UBERON:tooth

characteristic: host body product

text: UBERON:mouth

characteristic: host body site

text: Adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

text: Mouse 101

characteristic: host subject id

characteristic: host taxid

text: Not provided

characteristic: host weight

text: weeks

text: g

characteristic: latitude

characteristic: longitude

characteristic: mouse number

text: oral metagenome

text: UCSDMI

text: TRUE

text: tooth

characteristic: sample type

text: oral metagenome

text: male

characteristic: sex

text: Not provided

characteristic: title

text: 10 week IHC

text: Missing: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: anonymized name

characteristic: cage number

text: In Chamber

text: 2017-09-26 10:00

text: Mouse 102 baseline stool collection 1 of 20

characteristic: description

text: HFD

characteristic: diet

text: TRUE

characteristic: dob

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: 10 weeks

text: IHC

characteristic: exposure type

text: ApoE KO

characteristic: genotype

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: adult

text: Mus musculus

text: Mouse 102

text: weeks

text: g

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: feces

text: mouse gut metagenome

text: male

text: 10 week IHC


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: In Chamber

text: 2017-10-27 10:00

text: Mouse 102 stool collection 10 of 20

text: HFD

text: TRUE

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: 10 weeks

text: IHC

text: ApoE KO

text: USA:CA:San Diego

text: UBERON:feces

characteristic: host body habitat

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: Adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

text: Mouse 102

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: weeks

text: g

characteristic: latitude

characteristic: longitude

characteristic: mouse number

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

text: Not provided

characteristic: timepoint

characteristic: title

text: 10 week IHC

text: Missing: Not provided

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

characteristic: cage number

text: In Chamber

text: 2017-10-31 10:00

text: Mouse 102 stool collection 11 of 20

characteristic: description

text: HFD

characteristic: diet

text: TRUE

characteristic: dob

characteristic: elevation

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: 10 weeks

text: IHC

characteristic: exposure type

text: ApoE KO

characteristic: genotype

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: Adult

text: Mus musculus

text: Mouse 102

text: weeks

text: g

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: feces

text: mouse gut metagenome

text: male

text: Not provided

text: 10 week IHC

text: Missing: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: In Chamber

text: New lot of food

text: 2017-11-03 10:00

text: Mouse 102 stool collection 12 of 20

text: HFD

text: TRUE

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: 10 weeks

text: IHC

text: ApoE KO

text: USA:CA:San Diego

text: UBERON:feces

characteristic: host body habitat

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: Adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

text: Mouse 102

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: weeks

text: g

characteristic: latitude

characteristic: longitude

characteristic: mouse number

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

text: Not provided

characteristic: timepoint

characteristic: title

text: 10 week IHC

text: Missing: Not provided

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

characteristic: cage number

text: In Chamber

text: New bag of food

text: 2017-11-07 10:00

text: Mouse 102 stool collection 13 of 20

characteristic: description

text: HFD

characteristic: diet

text: TRUE

characteristic: dob

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: 10 weeks

text: IHC

characteristic: exposure type

text: ApoE KO

characteristic: genotype

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: adult

text: Mus musculus

text: Mouse 102

text: weeks

text: g

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: feces

text: mouse gut metagenome

text: male

text: 10 week IHC


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: In Chamber

text: New bag of food

text: 2017-11-10 10:00

text: Mouse 102 stool collection 14 of 20

text: HFD

text: TRUE

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: 10 weeks

text: IHC

text: ApoE KO

text: USA:CA:San Diego

text: UBERON:feces

characteristic: host body habitat

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: Adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

text: Mouse 102

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: weeks

text: g

characteristic: latitude

characteristic: longitude

characteristic: mouse number

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

text: Not provided

characteristic: timepoint

characteristic: title

text: 10 week IHC

text: Missing: Not provided

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

characteristic: cage number

text: In Chamber

text: 2017-11-14 10:00

text: Mouse 102 stool collection 15 of 20

characteristic: description

text: HFD

characteristic: diet

text: TRUE

characteristic: dob

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: 10 weeks

text: IHC

characteristic: exposure type

text: ApoE KO

characteristic: genotype

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: adult

text: Mus musculus

text: Mouse 102

text: weeks

text: g

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: feces

text: mouse gut metagenome

text: male

text: 10 week IHC


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: In Chamber

text: 2017-11-17 10:00

text: Mouse 102 stool collection 16 of 20

text: HFD

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: 10 weeks

text: IHC

text: ApoE KO

text: USA:CA:San Diego

text: UBERON:feces

characteristic: host body habitat

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

text: Mouse 102

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: weeks

text: g

characteristic: latitude

characteristic: longitude

characteristic: mouse number

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: title

text: 10 week IHC


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

characteristic: cage number

text: In Chamber

text: New bag of food

text: 2017-11-21 10:00

text: Mouse 102 stool collection 17 of 20

characteristic: description

text: HFD

characteristic: diet

text: TRUE

characteristic: dob

characteristic: elevation

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: 10 weeks

text: IHC

characteristic: exposure type

text: ApoE KO

characteristic: genotype

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: Adult

text: Mus musculus

text: Mouse 102

text: weeks

text: g

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: feces

text: mouse gut metagenome

text: male

text: Not provided

characteristic: timepoint

text: 10 week IHC

text: Missing: Not provided

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: In Chamber

text: 2017-11-24 10:00

text: Mouse 102 stool collection 18 of 20

text: HFD

text: TRUE

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: 10 weeks

text: IHC

text: ApoE KO

text: USA:CA:San Diego

text: UBERON:feces

characteristic: host body habitat

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: Adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

text: Mouse 102

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: weeks

text: g

characteristic: latitude

characteristic: longitude

characteristic: mouse number

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

text: Not provided

characteristic: title

text: 10 week IHC

text: Missing: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: anonymized name

characteristic: cage number

text: In Chamber

text: New bag of food

text: 2017-11-28 10:00

text: Mouse 102 stool collection 19 of 20

characteristic: description

text: HFD

characteristic: diet

text: TRUE

characteristic: dob

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: 10 weeks

text: IHC

characteristic: exposure type

text: ApoE KO

characteristic: genotype

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: adult

text: Mus musculus

text: Mouse 102

text: weeks

text: g

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: feces

text: mouse gut metagenome

text: male

text: 10 week IHC


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: In Chamber

text: New bag of food

text: 2017-09-29 10:00

text: Mouse 102 stool collection 2 of 20

text: HFD

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: 10 weeks

text: IHC

text: ApoE KO

text: USA:CA:San Diego

text: UBERON:feces

characteristic: host body habitat

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

text: Mouse 102

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: weeks

text: g

characteristic: latitude

characteristic: longitude

characteristic: mouse number

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: title

text: 10 week IHC


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: anonymized name

characteristic: cage number

text: In Chamber

text: 2017-12-01 10:00

text: Mouse 102 stool collection 20 of 20

characteristic: description

text: HFD

characteristic: diet

text: TRUE

characteristic: dob

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: 10 weeks

text: IHC

characteristic: exposure type

text: Was only able to get one pellet

text: ApoE KO

characteristic: genotype

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: adult

text: Mus musculus

text: Mouse 102

text: weeks

text: g

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: feces

text: mouse gut metagenome

text: male

text: 10 week IHC


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: In Chamber

text: Put Nyla bones in cage

text: 2017-10-03 10:00

text: Mouse 102 stool collection 3 of 20

text: HFD

text: TRUE

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: 10 weeks

text: IHC

text: ApoE KO

text: USA:CA:San Diego

text: UBERON:feces

characteristic: host body habitat

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: Adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

text: Mouse 102

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: weeks

text: g

characteristic: latitude

characteristic: longitude

characteristic: mouse number

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

text: Not provided

characteristic: timepoint

characteristic: title

text: 10 week IHC

text: Missing: Not provided

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

characteristic: cage number

text: In Chamber

text: 2017-10-06 10:00

text: Mouse 102 stool collection 4 of 20

characteristic: description

text: HFD

characteristic: diet

text: TRUE

characteristic: dob

characteristic: elevation

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: 10 weeks

text: IHC

characteristic: exposure type

text: ApoE KO

characteristic: genotype

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: Adult

text: Mus musculus

text: Mouse 102

text: weeks

text: g

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: feces

text: mouse gut metagenome

text: male

text: Not provided

text: 10 week IHC

text: Missing: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: In Chamber

text: 2017-10-10 10:00

text: Mouse 102 stool collection 5 of 20

text: HFD

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: 10 weeks

text: IHC

text: ApoE KO

text: USA:CA:San Diego

text: UBERON:feces

characteristic: host body habitat

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

text: Mouse 102

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: weeks

text: g

characteristic: latitude

characteristic: longitude

characteristic: mouse number

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: title

text: 10 week IHC


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

characteristic: cage number

text: In Chamber

text: New bag of food

text: 2017-10-13 10:00

text: Mouse 102 stool collection 6 of 20

characteristic: description

text: HFD

characteristic: diet

text: TRUE

characteristic: dob

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: 10 weeks

text: IHC

characteristic: exposure type

text: ApoE KO

characteristic: genotype

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: adult

text: Mus musculus

text: Mouse 102

text: weeks

text: g

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: feces

text: mouse gut metagenome

text: male

text: 10 week IHC


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: In Chamber

text: 2017-10-17 10:00

text: Mouse 102 stool collection 7 of 20

text: HFD

text: TRUE

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: 10 weeks

text: IHC

text: Orit only for sample collection

text: ApoE KO

text: USA:CA:San Diego

text: UBERON:feces

characteristic: host body habitat

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: Adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

text: Mouse 102

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: weeks

text: g

characteristic: latitude

characteristic: longitude

characteristic: mouse number

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

text: Not provided

characteristic: timepoint

characteristic: title

text: 10 week IHC

text: Missing: Not provided

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

characteristic: cage number

text: In Chamber

text: 2017-10-20 10:00

text: Mouse 102 stool collection 8 of 20

characteristic: description

text: HFD

characteristic: diet

text: TRUE

characteristic: dob

characteristic: elevation

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: 10 weeks

text: IHC

characteristic: exposure type

text: ApoE KO

characteristic: genotype

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: Adult

text: Mus musculus

text: Mouse 102

text: weeks

text: g

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: feces

text: mouse gut metagenome

text: male

text: Not provided

text: 10 week IHC

text: Missing: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: In Chamber

text: 2017-10-24 10:00

text: Mouse 102 stool collection 9 of 20

text: HFD

text: TRUE

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: 10 weeks

text: IHC

text: ApoE KO

text: USA:CA:San Diego

text: UBERON:feces

characteristic: host body habitat

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: Adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

text: Mouse 102

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: weeks

text: g

characteristic: latitude

characteristic: longitude

characteristic: mouse number

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

text: Not provided

characteristic: timepoint

characteristic: title

text: 10 week IHC

text: Missing: Not provided

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

characteristic: cage number

text: Not provided

text: In Chamber

text: 2017-12-04 10:30

text: Mouse 102 tooth collection at terminal point

characteristic: description

text: HFD

characteristic: diet

text: TRUE

characteristic: dob

characteristic: elevation

text: Host-asssociated

text: Animal-associated

text: Animal corpus

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: organic material

text: 10 weeks

text: IHC

characteristic: exposure type

text: One tube for microbiome and metabolome

text: ApoE KO

characteristic: genotype

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:oral cavity

text: UBERON:tooth

text: UBERON:mouth

text: Adult

text: Mus musculus

text: Mouse 102

text: Not provided

text: weeks

text: g

text: oral metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: tooth

text: oral metagenome

text: male

text: Not provided

text: 10 week IHC

text: Missing: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: In Chamber

text: 2017-09-26 10:00

text: Mouse 103 baseline stool collection 1 of 20

text: HFD

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: 10 weeks

text: IHC

text: ApoE KO

text: USA:CA:San Diego

text: UBERON:feces

characteristic: host body habitat

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

text: Mouse 103

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: weeks

text: g

characteristic: latitude

characteristic: longitude

characteristic: mouse number

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: title

text: 10 week IHC


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

characteristic: cage number

text: In Chamber

text: 2017-10-27 10:00

text: Mouse 103 stool collection 10 of 20

characteristic: description

text: HFD

characteristic: diet

text: TRUE

characteristic: dob

characteristic: elevation

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: 10 weeks

text: IHC

characteristic: exposure type

text: ApoE KO

characteristic: genotype

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: Adult

text: Mus musculus

text: Mouse 103

text: weeks

text: g

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: feces

text: mouse gut metagenome

text: male

text: Not provided

characteristic: timepoint

text: 10 week IHC

text: Missing: Not provided

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: In Chamber

text: 2017-10-31 10:00

text: Mouse 103 stool collection 11 of 20

text: HFD

text: TRUE

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: 10 weeks

text: IHC

text: ApoE KO

text: USA:CA:San Diego

text: UBERON:feces

characteristic: host body habitat

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: Adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

text: Mouse 103

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: weeks

text: g

characteristic: latitude

characteristic: longitude

characteristic: mouse number

text: Found dead on following collection

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

text: Not provided

characteristic: title

text: 10 week IHC

text: Missing: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: anonymized name

characteristic: cage number

text: In Chamber

text: New bag of food

text: 2017-09-29 10:00

text: Mouse 103 stool collection 2 of 20

characteristic: description

text: HFD

characteristic: diet

text: TRUE

characteristic: dob

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: 10 weeks

text: IHC

characteristic: exposure type

text: ApoE KO

characteristic: genotype

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: adult

text: Mus musculus

text: Mouse 103

text: weeks

text: g

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: feces

text: mouse gut metagenome

text: male

text: 10 week IHC


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: In Chamber

text: Put Nyla bones in cage

text: 2017-10-03 10:00

text: Mouse 103 stool collection 3 of 20

text: HFD

text: TRUE

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: 10 weeks

text: IHC

text: ApoE KO

text: USA:CA:San Diego

text: UBERON:feces

characteristic: host body habitat

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: Adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

text: Mouse 103

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: weeks

text: g

characteristic: latitude

characteristic: longitude

characteristic: mouse number

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

text: Not provided

characteristic: timepoint

characteristic: title

text: 10 week IHC

text: Missing: Not provided

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

characteristic: cage number

text: In Chamber

text: 2017-10-06 10:00

text: Mouse 103 stool collection 4 of 20

characteristic: description

text: HFD

characteristic: diet

text: TRUE

characteristic: dob

characteristic: elevation

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: 10 weeks

text: IHC

characteristic: exposure type

text: ApoE KO

characteristic: genotype

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: Adult

text: Mus musculus

text: Mouse 103

text: weeks

text: g

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: feces

text: mouse gut metagenome

text: male

text: Not provided

text: 10 week IHC

text: Missing: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: In Chamber

text: 2017-10-10 10:00

text: Mouse 103 stool collection 5 of 20

text: HFD

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: 10 weeks

text: IHC

text: ApoE KO

text: USA:CA:San Diego

text: UBERON:feces

characteristic: host body habitat

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

text: Mouse 103

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: weeks

text: g

characteristic: latitude

characteristic: longitude

characteristic: mouse number

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: title

text: 10 week IHC


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

characteristic: cage number

text: In Chamber

text: New bag of food

text: 2017-10-13 10:00

text: Mouse 103 stool collection 6 of 20

characteristic: description

text: HFD

characteristic: diet

text: TRUE

characteristic: dob

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: 10 weeks

text: IHC

characteristic: exposure type

text: ApoE KO

characteristic: genotype

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: adult

text: Mus musculus

text: Mouse 103

text: weeks

text: g

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: feces

text: mouse gut metagenome

text: male

text: 10 week IHC


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: In Chamber

text: 2017-10-17 10:00

text: Mouse 103 stool collection 7 of 20

text: HFD

text: TRUE

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: 10 weeks

text: IHC

text: Orit only for sample collection

text: ApoE KO

text: USA:CA:San Diego

text: UBERON:feces

characteristic: host body habitat

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: Adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

text: Mouse 103

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: weeks

text: g

characteristic: latitude

characteristic: longitude

characteristic: mouse number

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

text: Not provided

characteristic: timepoint

characteristic: title

text: 10 week IHC

text: Missing: Not provided

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

characteristic: cage number

text: In Chamber

text: 2017-10-20 10:00

text: Mouse 103 stool collection 8 of 20

characteristic: description

text: HFD

characteristic: diet

text: TRUE

characteristic: dob

characteristic: elevation

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: 10 weeks

text: IHC

characteristic: exposure type

text: ApoE KO

characteristic: genotype

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: Adult

text: Mus musculus

text: Mouse 103

text: weeks

text: g

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: feces

text: mouse gut metagenome

text: male

text: Not provided

text: 10 week IHC

text: Missing: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: In Chamber

text: 2017-10-24 10:00

text: Mouse 103 stool collection 9 of 20

text: HFD

text: TRUE

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: 10 weeks

text: IHC

text: ApoE KO

text: USA:CA:San Diego

text: UBERON:feces

characteristic: host body habitat

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: Adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

text: Mouse 103

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: weeks

text: g

characteristic: latitude

characteristic: longitude

characteristic: mouse number

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

text: Not provided

characteristic: timepoint

characteristic: title

text: 10 week IHC

text: Missing: Not provided

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

characteristic: cage number

text: In Chamber

text: 2017-09-26 10:00

text: Mouse 104 baseline stool collection 1 of 20

characteristic: description

text: HFD

characteristic: diet

text: TRUE

characteristic: dob

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: 10 weeks

text: IHC

characteristic: exposure type

text: ApoE KO

characteristic: genotype

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: adult

text: Mus musculus

text: Mouse 104

text: weeks

text: g

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: feces

text: mouse gut metagenome

text: male

text: 10 week IHC


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: In Chamber

text: 2017-10-27 10:00

text: Mouse 104 stool collection 10 of 20

text: HFD

text: TRUE

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: 10 weeks

text: IHC

text: ApoE KO

text: USA:CA:San Diego

text: UBERON:feces

characteristic: host body habitat

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: Adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

text: Mouse 104

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: weeks

text: g

characteristic: latitude

characteristic: longitude

characteristic: mouse number

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

text: Not provided

characteristic: timepoint

characteristic: title

text: 10 week IHC

text: Missing: Not provided

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

characteristic: cage number

text: In Chamber

text: 2017-10-31 10:00

text: Mouse 104 stool collection 11 of 20

characteristic: description

text: HFD

characteristic: diet

text: TRUE

characteristic: dob

characteristic: elevation

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: 10 weeks

text: IHC

characteristic: exposure type

text: ApoE KO

characteristic: genotype

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: Adult

text: Mus musculus

text: Mouse 104

text: weeks

text: g

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: feces

text: mouse gut metagenome

text: male

text: Not provided

text: 10 week IHC

text: Missing: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: In Chamber

text: New lot of food

text: 2017-11-03 10:00

text: Mouse 104 stool collection 12 of 20

text: HFD

text: TRUE

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: 10 weeks

text: IHC

text: ApoE KO

text: USA:CA:San Diego

text: UBERON:feces

characteristic: host body habitat

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: Adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

text: Mouse 104

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: weeks

text: g

characteristic: latitude

characteristic: longitude

characteristic: mouse number

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

text: Not provided

characteristic: timepoint

characteristic: title

text: 10 week IHC

text: Missing: Not provided

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

characteristic: cage number

text: In Chamber

text: New bag of food

text: 2017-11-07 10:00

text: Mouse 104 stool collection 13 of 20

characteristic: description

text: HFD

characteristic: diet

text: TRUE

characteristic: dob

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: 10 weeks

text: IHC

characteristic: exposure type

text: ApoE KO

characteristic: genotype

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: adult

text: Mus musculus

text: Mouse 104

text: weeks

text: g

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: feces

text: mouse gut metagenome

text: male

text: 10 week IHC


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: In Chamber

text: New bag of food

text: 2017-11-10 10:00

text: Mouse 104 stool collection 14 of 20

text: HFD

text: TRUE

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: 10 weeks

text: IHC

text: ApoE KO

text: USA:CA:San Diego

text: UBERON:feces

characteristic: host body habitat

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: Adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

text: Mouse 104

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: weeks

text: g

characteristic: latitude

characteristic: longitude

characteristic: mouse number

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

text: Not provided

characteristic: timepoint

characteristic: title

text: 10 week IHC

text: Missing: Not provided

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

characteristic: cage number

text: In Chamber

text: 2017-11-14 10:00

text: Mouse 104 stool collection 15 of 20

characteristic: description

text: HFD

characteristic: diet

text: TRUE

characteristic: dob

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: 10 weeks

text: IHC

characteristic: exposure type

text: ApoE KO

characteristic: genotype

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: adult

text: Mus musculus

text: Mouse 104

text: weeks

text: g

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: feces

text: mouse gut metagenome

text: male

text: 10 week IHC


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: In Chamber

text: 2017-11-17 10:00

text: Mouse 104 stool collection 16 of 20

text: HFD

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: 10 weeks

text: IHC

text: ApoE KO

text: USA:CA:San Diego

text: UBERON:feces

characteristic: host body habitat

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

text: Mouse 104

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: weeks

text: g

characteristic: latitude

characteristic: longitude

characteristic: mouse number

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: title

text: 10 week IHC


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

characteristic: cage number

text: In Chamber

text: New bag of food

text: 2017-11-21 10:00

text: Mouse 104 stool collection 17 of 20

characteristic: description

text: HFD

characteristic: diet

text: TRUE

characteristic: dob

characteristic: elevation

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: 10 weeks

text: IHC

characteristic: exposure type

text: ApoE KO

characteristic: genotype

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: Adult

text: Mus musculus

text: Mouse 104

text: weeks

text: g

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: feces

text: mouse gut metagenome

text: male

text: Not provided

characteristic: timepoint

text: 10 week IHC

text: Missing: Not provided

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: In Chamber

text: 2017-11-24 10:00

text: Mouse 104 stool collection 18 of 20

text: HFD

text: TRUE

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: 10 weeks

text: IHC

text: ApoE KO

text: USA:CA:San Diego

text: UBERON:feces

characteristic: host body habitat

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: Adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

text: Mouse 104

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: weeks

text: g

characteristic: latitude

characteristic: longitude

characteristic: mouse number

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

text: Not provided

characteristic: title

text: 10 week IHC

text: Missing: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: anonymized name

characteristic: cage number

text: In Chamber

text: New bag of food

text: 2017-11-28 10:00

text: Mouse 104 stool collection 19 of 20

characteristic: description

text: HFD

characteristic: diet

text: TRUE

characteristic: dob

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: 10 weeks

text: IHC

characteristic: exposure type

text: ApoE KO

characteristic: genotype

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: adult

text: Mus musculus

text: Mouse 104

text: weeks

text: g

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: feces

text: mouse gut metagenome

text: male

text: 10 week IHC


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: In Chamber

text: New bag of food

text: 2017-09-29 10:00

text: Mouse 104 stool collection 2 of 20

text: HFD

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: 10 weeks

text: IHC

text: ApoE KO

text: USA:CA:San Diego

text: UBERON:feces

characteristic: host body habitat

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

text: Mouse 104

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: weeks

text: g

characteristic: latitude

characteristic: longitude

characteristic: mouse number

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: title

text: 10 week IHC


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: anonymized name

characteristic: cage number

text: In Chamber

text: 2017-12-01 10:00

text: Mouse 104 stool collection 20 of 20

characteristic: description

text: HFD

characteristic: diet

text: TRUE

characteristic: dob

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: 10 weeks

text: IHC

characteristic: exposure type

text: ApoE KO

characteristic: genotype

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: adult

text: Mus musculus

text: Mouse 104

text: weeks

text: g

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: feces

text: mouse gut metagenome

text: male

text: 10 week IHC


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: In Chamber

text: Put Nyla bones in cage

text: 2017-10-03 10:00

text: Mouse 104 stool collection 3 of 20

text: HFD

text: TRUE

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: 10 weeks

text: IHC

text: ApoE KO

text: USA:CA:San Diego

text: UBERON:feces

characteristic: host body habitat

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: Adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

text: Mouse 104

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: weeks

text: g

characteristic: latitude

characteristic: longitude

characteristic: mouse number

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

text: Not provided

characteristic: timepoint

characteristic: title

text: 10 week IHC

text: Missing: Not provided

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

characteristic: cage number

text: In Chamber

text: 2017-10-06 10:00

text: Mouse 104 stool collection 4 of 20

characteristic: description

text: HFD

characteristic: diet

text: TRUE

characteristic: dob

characteristic: elevation

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: 10 weeks

text: IHC

characteristic: exposure type

text: ApoE KO

characteristic: genotype

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: Adult

text: Mus musculus

text: Mouse 104

text: weeks

text: g

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: feces

text: mouse gut metagenome

text: male

text: Not provided

text: 10 week IHC

text: Missing: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: In Chamber

text: 2017-10-10 10:00

text: Mouse 104 stool collection 5 of 20

text: HFD

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: 10 weeks

text: IHC

text: ApoE KO

text: USA:CA:San Diego

text: UBERON:feces

characteristic: host body habitat

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

text: Mouse 104

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: weeks

text: g

characteristic: latitude

characteristic: longitude

characteristic: mouse number

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: title

text: 10 week IHC


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

characteristic: cage number

text: In Chamber

text: New bag of food

text: 2017-10-13 10:00

text: Mouse 104 stool collection 6 of 20

characteristic: description

text: HFD

characteristic: diet

text: TRUE

characteristic: dob

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: 10 weeks

text: IHC

characteristic: exposure type

text: ApoE KO

characteristic: genotype

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: adult

text: Mus musculus

text: Mouse 104

text: weeks

text: g

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: feces

text: mouse gut metagenome

text: male

text: 10 week IHC


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: In Chamber

text: 2017-10-17 10:00

text: Mouse 104 stool collection 7 of 20

text: HFD

text: TRUE

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: 10 weeks

text: IHC

text: Orit only for sample collection

text: ApoE KO

text: USA:CA:San Diego

text: UBERON:feces

characteristic: host body habitat

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: Adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

text: Mouse 104

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: weeks

text: g

characteristic: latitude

characteristic: longitude

characteristic: mouse number

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

text: Not provided

characteristic: timepoint

characteristic: title

text: 10 week IHC

text: Missing: Not provided

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

characteristic: cage number

text: In Chamber

text: 2017-10-20 10:00

text: Mouse 104 stool collection 8 of 20

characteristic: description

text: HFD

characteristic: diet

text: TRUE

characteristic: dob

characteristic: elevation

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: 10 weeks

text: IHC

characteristic: exposure type

text: ApoE KO

characteristic: genotype

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: Adult

text: Mus musculus

text: Mouse 104

text: weeks

text: g

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: feces

text: mouse gut metagenome

text: male

text: Not provided

text: 10 week IHC

text: Missing: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: In Chamber

text: 2017-10-24 10:00

text: Mouse 104 stool collection 9 of 20

text: HFD

text: TRUE

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: 10 weeks

text: IHC

text: ApoE KO

text: USA:CA:San Diego

text: UBERON:feces

characteristic: host body habitat

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: Adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

text: Mouse 104

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: weeks

text: g

characteristic: latitude

characteristic: longitude

characteristic: mouse number

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

text: Not provided

characteristic: timepoint

characteristic: title

text: 10 week IHC

text: Missing: Not provided

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

characteristic: cage number

text: Not provided

text: In Chamber

text: 2017-12-07 13:00

text: Mouse 104 tooth collection at terminal point

characteristic: description

text: HFD

characteristic: diet

text: TRUE

characteristic: dob

characteristic: elevation

text: Host-asssociated

text: Animal-associated

text: Animal corpus

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: organic material

text: 10 weeks

text: IHC

characteristic: exposure type

text: One tube for microbiome and metabolome

text: ApoE KO

characteristic: genotype

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:oral cavity

text: UBERON:tooth

text: UBERON:mouth

text: Adult

text: Mus musculus

text: Mouse 104

text: Not provided

text: weeks

text: g

text: oral metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: tooth

text: oral metagenome

text: male

text: Not provided

text: 10 week IHC

text: Missing: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: In Chamber

text: 2017-09-26 10:00

text: Mouse 105 baseline stool collection 1 of 20

text: HFD

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: 10 weeks

text: IHC

text: ApoE KO

text: USA:CA:San Diego

text: UBERON:feces

characteristic: host body habitat

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

text: Mouse 105

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: weeks

text: g

characteristic: latitude

characteristic: longitude

characteristic: mouse number

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: title

text: 10 week IHC


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

characteristic: cage number

text: In Chamber

text: 2017-10-27 10:00

text: Mouse 105 stool collection 10 of 20

characteristic: description

text: HFD

characteristic: diet

text: TRUE

characteristic: dob

characteristic: elevation

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: 10 weeks

text: IHC

characteristic: exposure type

text: ApoE KO

characteristic: genotype

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: Adult

text: Mus musculus

text: Mouse 105

text: weeks

text: g

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: feces

text: mouse gut metagenome

text: male

text: Not provided

characteristic: timepoint

text: 10 week IHC

text: Missing: Not provided

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: In Chamber

text: 2017-10-31 10:00

text: Mouse 105 stool collection 11 of 20

text: HFD

text: TRUE

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: 10 weeks

text: IHC

text: ApoE KO

text: USA:CA:San Diego

text: UBERON:feces

characteristic: host body habitat

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: Adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

text: Mouse 105

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: weeks

text: g

characteristic: latitude

characteristic: longitude

characteristic: mouse number

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

text: Not provided

characteristic: title

text: 10 week IHC

text: Missing: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: anonymized name

characteristic: cage number

text: In Chamber

text: New lot of food

text: 2017-11-03 10:00

text: Mouse 105 stool collection 12 of 20

characteristic: description

text: HFD

characteristic: diet

text: TRUE

characteristic: dob

characteristic: elevation

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: 10 weeks

text: IHC

characteristic: exposure type

text: ApoE KO

characteristic: genotype

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: Adult

text: Mus musculus

text: Mouse 105

text: weeks

text: g

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: feces

text: mouse gut metagenome

text: male

text: Not provided

characteristic: timepoint

text: 10 week IHC

text: Missing: Not provided

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: In Chamber

text: New bag of food

text: 2017-11-07 10:00

text: Mouse 105 stool collection 13 of 20

text: HFD

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: 10 weeks

text: IHC

text: ApoE KO

text: USA:CA:San Diego

text: UBERON:feces

characteristic: host body habitat

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

text: Mouse 105

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: weeks

text: g

characteristic: latitude

characteristic: longitude

characteristic: mouse number

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: title

text: 10 week IHC


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: anonymized name

characteristic: cage number

text: In Chamber

text: New bag of food

text: 2017-11-10 10:00

text: Mouse 105 stool collection 14 of 20

characteristic: description

text: HFD

characteristic: diet

text: TRUE

characteristic: dob

characteristic: elevation

text: Host-asssociated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: 10 weeks

text: IHC

characteristic: exposure type

text: ApoE KO

characteristic: genotype

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: Adult

text: Mus musculus

text: Mouse 105

text: weeks

text: g

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: feces

text: mouse gut metagenome

text: male

text: Not provided

characteristic: timepoint

text: 10 week IHC

text: Missing: Not provided

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: In Chamber

text: 2017-11-14 10:00

text: Mouse 105 stool collection 15 of 20

text: HFD

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: feces

text: 10 weeks

text: IHC

text: ApoE KO

text: USA:CA:San Diego

text: UBERON:feces

characteristic: host body habitat

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

text: Mouse 105

characteristic: host subject id

characteristic: host taxid

characteristic: host weight

text: weeks

text: g

characteristic: latitude

characteristic: longitude

characteristic: mouse number

text: mouse gut metagenome

text: UCSDMI

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: male

characteristic: sex

characteristic: title

text: 10 week IHC


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: anonymized name

characteristic: cage number

text: In Chamber

text: 2017-11-17 10:00

text: Mouse 105 stool collection 16 of 20

characteristic: description

text: HFD

characteristic: diet

text: TRUE

characteristic: dob

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: 10 weeks

text: IHC

characteristic: exposure type

text: ApoE KO

characteristic: genotype

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: adult

text: Mus musculus

text: Mouse 105

text: weeks

text: g

text: mouse gut metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: feces

text: mouse gut metagenome

text: male

text: 10 week IHC