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characteristic: ENA-CHECKLIST

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text: LAVAL UNIVERSITY

text: public

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text: mouse

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text: gut

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text: feces

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text: Canada

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unit: DD

characteristic: geographic location (latitude)

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characteristic: investigation type

text: mouse gut metagenome

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text: Vitamin D-SPF

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text: Illumina MiSeq

characteristic: sequencing method

text: Low-molecular weight salmon peptides limit the development of obesity and associated metabolic disorders by modulating the gut-liver axis in high-fat and sucrose fed and vitamin D deficient LDLr-/-/ApoB100/100 mice.


P1 stool before

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text: National Health Research Institutes

characteristic: INSDC center name

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text: public

characteristic: INSDC status

text: P1 stool before

tag: Namespace:National Health Research Institutes

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: P1 stool before

characteristic: title


P1 stool 1 week

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characteristic: External Id

text: National Health Research Institutes

text: public

characteristic: SRA accession

text: P1 stool 1 week

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text: human

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text: Homo sapiens

text: P1 stool 1 week


P1 stool 1 month

text: National Health Research Institutes

text: public

text: P1 stool 1 month

text: human

text: Homo sapiens

text: Homo sapiens

text: P1 stool 1 month


P2 stool before

text: National Health Research Institutes

text: public

text: P2 stool before

text: human

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text: Homo sapiens

text: P2 stool before


P2 stool 1 week

text: National Health Research Institutes

text: public

text: P2 stool 1 week

text: human

text: Homo sapiens

text: Homo sapiens

text: P2 stool 1 week


P2 stool 1 month

text: National Health Research Institutes

text: public

text: P2 stool 1 month

text: human

text: Homo sapiens

text: Homo sapiens

text: P2 stool 1 month


P3 stool before

text: National Health Research Institutes

text: public

text: P3 stool before

text: human

text: Homo sapiens

text: Homo sapiens

text: P3 stool before


P3 stool 1 week

text: National Health Research Institutes

text: public

text: P3 stool 1 week

text: human

text: Homo sapiens

text: Homo sapiens

text: P3 stool 1 week


P3 stool 1 month

text: National Health Research Institutes

text: public

text: P3 stool 1 month

text: human

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text: Homo sapiens

text: P3 stool 1 month


P4 stool before

text: National Health Research Institutes

text: public

text: P4 stool before

text: human

text: Homo sapiens

text: Homo sapiens

text: P4 stool before


P4 stool 1 week

text: National Health Research Institutes

text: public

text: P4 stool 1 week

text: human

text: Homo sapiens

text: Homo sapiens

text: P4 stool 1 week


P4 stool 1 month

text: National Health Research Institutes

text: public

text: P4 stool 1 month

text: human

text: Homo sapiens

text: Homo sapiens

text: P4 stool 1 month


P5 stool before

text: National Health Research Institutes

text: public

text: P5 stool before

text: human

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text: Homo sapiens

text: P5 stool before


P5 stool 1 week

text: National Health Research Institutes

text: public

text: P5 stool 1 week

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text: Homo sapiens

text: P5 stool 1 week


P5 stool 1 month

text: National Health Research Institutes

text: public

text: P5 stool 1 month

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text: Homo sapiens

text: P5 stool 1 month


P6 stool before

text: National Health Research Institutes

text: public

text: P6 stool before

text: human

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text: Homo sapiens

text: P6 stool before


P6 stool 1 week

text: National Health Research Institutes

text: public

text: P6 stool 1 week

text: human

text: Homo sapiens

text: Homo sapiens

text: P6 stool 1 week


P6 stool 1 month

text: National Health Research Institutes

text: public

text: P6 stool 1 month

text: human

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text: Homo sapiens

text: P6 stool 1 month


P7 stool before

text: National Health Research Institutes

text: public

text: P7 stool before

text: human

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text: Homo sapiens

text: P7 stool before


P7 stool 1 week

text: National Health Research Institutes

text: public

text: P7 stool 1 week

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text: Homo sapiens

text: P7 stool 1 week


P7 stool 1 month

text: National Health Research Institutes

text: public

text: P7 stool 1 month

text: human

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text: Homo sapiens

text: P7 stool 1 month


Clostridium butyricum Miyairi 588

text: National Health Research Institutes

text: public

text: Clostridium butyricum Miyairi 588

text: Clostridium butyricum

text: Clostridium butyricum

text: Clostridium butyricum Miyairi 588


text: SNU

text: public

text: gut metagenome

text: gut metagenome


text: National Institute of Animal Science

text: public

tag: Namespace:National Institute of Animal Science

text: pig

text: Sus scrofa

text: Sus scrofa


text: public

characteristic: collection date

text: Germany

characteristic: country

text: Staphylococcus aureus

text: Staphylococcus aureus

characteristic: strain


text: public

text: Germany

text: Staphylococcus aureus

characteristic: organism

text: Staphylococcus aureus

text: Reference


text: JINAN UNIVERSITY

text: public

tag: Namespace:JINAN UNIVERSITY

text: feces metagenome

text: feces metagenome

text: feces metagenome


text: public

tag: Namespace:Key Laboratory of Environmental and Applied Microbiology, CAS

text: pig

characteristic: environment (biome)

text: gut

characteristic: environment (feature)

text: gut

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

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text: mimarks-survey

characteristic: investigation type

text: gut metagenome

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text: gut metagenome

text: MiSeq

characteristic: sequencing method


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characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Key Laboratory of Environmental and Applied Microbiology, CAS

characteristic: INSDC center name

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text: public

characteristic: INSDC status

text: pig

text: gut

text: gut

text: China

text: host-associated

text: mimarks-survey

text: gut metagenome

text: gut metagenome

text: MiSeq

characteristic: title


text: CENTRE FOR ECOLOGY AND HYDROLOGY

text: public

characteristic: SRA accession

tag: Namespace:CENTRE FOR ECOLOGY AND HYDROLOGY

characteristic: Submitter Id

characteristic: collection date

text: snail microbiome

characteristic: environment (biome)

text: gut

characteristic: environment (feature)

text: gut

characteristic: environment (material)

text: United Kingdom

text: host-associated

text: metagenome

text: metagenome

characteristic: organism

text: Microplastics and PBDE effects on Lymnaea stagnalis

text: metagenome

text: Illumina


text: CARDIFF UNIVERSITY

text: public

tag: Namespace:CARDIFF UNIVERSITY

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: neuron

characteristic: cell type

text: human

characteristic: common name

text: Protocols: Human H9 ES cells were plated on matrigel-coated plates (Corning, VWR) and maintained in mTSER medium (STEMCELL Technologies) supplemented with 10 ng/ml of FGF2 (Peprotech). hES cells were passaged by manual dissociation with 0.02% EDTA in Dulbecco’s PBS (0.5mM), pH 7.2 (Sigma) and seeded for an 8-day phase of neuronal induction in SLI medium which contained Advanced DMEM F-12 medium supplemented with glutamax, penicillin and streptomycin (ADF, Life Technologies) and 2% NeuroBrew-21 without retinoic acid (Miltenyi), the SMAD pathway inhibitors LDN193189 (1μM) and SB431542 (10μM), and the WNT pathway inhibitor IWR1 (1.5μM) (Tocris; [59]). Subsequently, neural progenitors were dissociated with Accutase (Life Technologies) and re-seeded for expansion to day 16 in LIA medium which contained ADF medium with 2% NeuroBrew-21 without retinoic acid (Miltenyi), LDN193189 (0.2μM), IWR1 (1.5μM) (Tocris) and 25 ng/ml of Activin A (Peprotech). Neuronal differentiation was initiated by seeding neural progenitors on a substrate of growth factor-reduced matrigel (Corning, VWR) & poly- L- lysine (Sigma) at a density of 100K cells/cm2 and cultured for 7 days in SynaptoJuice A medium which contained Advanced DMEM:F12 (with Glutamax), 1% penicillin/streptomycin, 2 % NeuroBrew21 with retinoic acid (Miltenyi Biotec), 2 µM PD0332991 (Selleckchem), 10 µM DAPT (Sigma-Aldrich), 0.6 mM CaCl2 (to give 1.8 mM CaCl2 in final complete medium (Sigma-Aldrich)), and 200 mM ascorbic acid (Sigma-Aldrich). The medium was replaced at day 7 post-plating by SynaptoJuice B medium which contained equal parts Advanced DMEM/F12 (with Glutamax) and Neurobasal A (Life Technologies), 1% penicillin/streptomycin (Life Technologies), 2% NeuroBrew-21 with retinoic acid (Miltenyi Biotec), 2 µM PD0332991 (Selleckchem), 3 µM CHIR 99021 (Tocris Bioscience), 0.3 mM CaCl2 (1.8 mM CaCl2 final), and 200 µM ascorbic acid (Sigma-Aldrich). Plated neurons were maintained for up to 14 days before exposure to TrkB ligands (see below). H9 ES cell-derived neurons were treated for 30 min, 2 h, 12 h and 24 h with BDNF (50 ng/ml), ZEB85 (5 μg/ml) and NT4 (75 ng/ml). Cultures were washed with D-PBS and lysed with 350 μl of RLT RNA lysis buffer containing 1 % β-mercaptoethanol. Total RNA was extracted from human neurons using the RNeasy Mini kit (Qiagen,). The TruSeq® Stranded mRNA Sample Preparation Guide and the high-throughput (HT) kit from Illumina was used according to the manufacturer’s instructions.

characteristic: description

text: embryo

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: Homo sapiens

text: Homo sapiens

text: embryonic stem cell

characteristic: progenitor cell type

text: Homo sapiens


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:Institute of Technology, University of Tartu

text: ArrayExpress

text: Protocols: 20-50 ml of culture was used for separating total RNA from log phase and toxin overexpression cultures. Cells were rapidly collected by centrifugation at 20°C for 5 min at 5000 x g and frozen in liquid nitrogen. Frozen cells were stored at -80°C. Bacteria were grown in lysogeny broth (LB) and on LB agar plates. Liquid cultures were grown at 37°C with aeration at 190 RPM on Infors HT Multitron shaker. Ampicillin (30 μgml-1 or 100 μgml-1) and chloramphenicol (50 μgml-1) were added for plasmid maintenance as required. Escherichia coli MG1655 was used as the control for RNA sequencing. Overnight culture was started from a fresh colony, grown for 16 to 17h, and diluted 1:1000 into 100 ml in 1 l flask. At OD600 ≈ 0.2, 50 ml of the culture was used for RNA extraction. The toxins were induced in BW25113 harboring either plasmids pSC228 for MazE expression and pSC3326 for MazF expression or pAT3 for MqsA expression and pTX3 for MqsR expression. The overnight culture medium was supplemented with 0.2% glucose to avoid the toxin leakage and 1 mM IPTG to induce the antitoxin. The overnight culture was diluted 1:1000 into 200 ml of LB in 1 l flasks. At OD600nm ≈ 0.2, 50 ml of the culture was removed and L-arabinose was added to final concentration of 1 mM to induce the toxin expression. After 2h, 20 ml of the culture was used for RNA extraction. At the same time, 50 ml of culture was collected by centrifugation (20°C for 5 min at 5000g), re-suspended in 1 ml of LB and added to 50 ml pre-warmed medium in 1 l flask. After 30 min recovery, 20 ml of the culture was used for RNA extraction. For RNA isolation cells were resuspended in 600 ul of ice-cold 1x TEN solution (10 mM Tris pH 7.5, 1 mM EDTA, 100 mM NaCl) and added quickly to the 600 ul preheated phenol-1% SDS solution (pH 4.5). Samples were mixed gently by inverting tubes a few times, incubated for 5 min at 67°C, and were re-inverted after each minute during the incubation. Lysates were centrifuged for 10 min at 4°C at 15 700 × g. Since here, all preparations were done on ice. 450 ul of aqueous phase was collected and extracted with 600 ul of phenol:chloroform, mixed vigorously on vortex, centrifuged as above and further extracted with 500 ul of chloroform. After centrifugation for 1 min at 4°C at 15 700 × g, 350 ul of aqueous phase was allocated, 0.1 volumes of 3M RNase free sodium acetate (pH 5.2) was added, and RNA was precipitated with 1.2 volumes of ice-cold isopropanol during 30 min incubation at -20°C. Tubes were then centrifuged for 40 min at 15 700 × g, RNA pellets were washed with 700 ul of 75% ethanol and centrifuged for 5 min at 12 000 × g. Pellets were air dried at room temperature for 10 min, dissolved in ddH20 and stored at - 80°C. Total RNA was treated with DNase and rRNA was depleted using the Ribo-Zero rRNA Removal Kit (Bacteria, Epicentre). RNA was fragmented with ultrasound (1 pulse of 15 sec at 4°C), followed by first-strand cDNA synthesis primed with N6 randomized primers. Illumina TruSeq sequencing adapters were ligated to the 5' and 3' ends of the cDNA. The cDNA was amplified with PCR (18 cycles). For Illumina sequencing, the samples were pooled in approximately equimolar amounts and the DNA fragments in the size range of 500 - 800 bp were eluted from a preparative agarose gel. The primers used for PCR amplification were designed for TruSeq sequencing according to the instructions of Illumina.

text: wild type genotype

text: logarithmic phase culture

characteristic: growth condition

text: Escherichia coli K-12

text: Escherichia coli K-12

text: Escherichia coli K-12

characteristic: strain

text: control

characteristic: title


E-MTAB-6993:MazF 2h

text: Institute of Technology, University of Tartu

text: public

characteristic: SRA accession

text: E-MTAB-6993:MazF 2h

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: inducible expression of MazF

text: 2 hours of MazF induction

text: Escherichia coli K-12

characteristic: organism

text: Escherichia coli K-12

text: Escherichia coli K-12

text: MazF 2h


E-MTAB-6993:MazF regrowth

text: public

text: E-MTAB-6993:MazF regrowth

text: ArrayExpress

characteristic: description

text: inducible expression of MazF

characteristic: genotype

text: 30 minutes recovery from MazF induction

text: Escherichia coli K-12

text: Escherichia coli K-12

text: Escherichia coli K-12

text: MazF regrowth


E-MTAB-6993:MqsR 2h

characteristic: ENA-CHECKLIST

text: public

text: E-MTAB-6993:MqsR 2h

text: ArrayExpress

text: inducible expression of MqsR

text: 2 hours of MqsR induction

text: Escherichia coli K-12

text: Escherichia coli K-12

text: Escherichia coli K-12

text: MqsR 2h


E-MTAB-6993:MqsR regrowth

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-6993:MqsR regrowth

text: ArrayExpress

text: inducible expression of MqsR

text: 30 minutes recovery from MqsR induction

text: Escherichia coli K-12

text: Escherichia coli K-12

text: Escherichia coli K-12

text: MqsR regrowth


characteristic: ENA-LAST-UPDATE

text: IPK-Gatersleben

text: public

text: Saffron

characteristic: common name

text: GBS data of Crocus sativus

text: Crocus sativus

text: Crocus sativus


characteristic: External Id

text: IPK-Gatersleben

characteristic: INSDC center name

text: public

text: Crocus oreocreticus

text: GBS data of Crocus oreocreticus

text: Crocus oreocreticus

text: Crocus oreocreticus


text: IPK-Gatersleben

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Crocus cartwrightianus

text: GBS data of Crocus cartwrightianus

text: Crocus cartwrightianus

text: Crocus cartwrightianus


text: Phillips University Marburg

text: public

characteristic: INSDC status

tag: Namespace:Phillips University Marburg

text: ArrayExpress

text: Protocols: AGB551 (veA+) was used as A. nidulans wildtype. Wildtype and mutant strains were grown in minimal medium (MM) (1% glucose, 7 mM KCl, 2 mM MgSO4, 70 mM NaNO3, 11.2 mM KH2PO4, 0.1% trace element solution pH 5.5 [131]) supplemented with 0.1% pyridoxine-HCl, 5 mM uridine, 5 mM uracil or 4-aminobenzoic acid, when needed. Strains were grown for two days on solid MM containing 2% agar in light at 37°C and two day old spores were harvested for further experiments. Total RNA of strains grown under submerged culture conditions for 24 h at 37°C under constant agitation on a rotary shaker was isolated using the Direct-zol Miniprep Kit (Zymo Research) according to manufacturer’s conditions Libraries were performed starting with 800 ng of total RNA using the TruSeq Stranded Total RNA Sample Prep Kit from Illumina (Cat. No. RS-122-2201).

text: telemorph

characteristic: developmental stage

text: deltaSclB and complemented SclB

text: Aspergillus nidulans

text: Aspergillus nidulans

text: Aspergillus nidulans


text: Phillips University Marburg

text: public

text: ArrayExpress

text: telemorph

text: deltaSclB

text: Aspergillus nidulans

text: Aspergillus nidulans

text: Aspergillus nidulans

characteristic: strain

characteristic: title


text: Phillips University Marburg

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: telemorph

text: wild type genotype

text: Aspergillus nidulans

text: Aspergillus nidulans

text: Aspergillus nidulans


text: EPFL SV IBI-SV UPDEPLA

text: public

tag: Namespace:EPFL SV IBI-SV UPDEPLA

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: fibroblast

characteristic: cell type

text: house mouse

text: Protocols: 3T3-L1 or IBA cells were induced to differentiation at day 0 (2 days post-confluence) by adding the induction medium, which is complete culture medium supplemented with the MDI cocktail (1μM dexameth¬asone, 0.5 mM 3-isobutyl-1-methylxanthine, and 167 nM insulin, all from Sigma, Saint-Louis, MO). At day 2, induction medium was removed and maintainance medium (complete culture medium supplemented with 167 nM insulin) was added. At day 4, the maintenance medium was removed and complete culture medium was added. The cells were harvested for staining or RNA extraction at day 6. RNA extractions were performed using the Direct-zol RNA Miniprep kit (R2052, Zymo Research). Potential genomic DNA contamination was eliminated by Dnase I digestion. The RNA quality and concentration was checked by Nanodrop spectrophotometer (Thermo Scientific). RNA extractions were performed using the Direct-zol RNA Miniprep kit (R2052, Zymo Research). Potential genomic DNA contamination was eliminated by Dnase I digestion. The RNA quality and concentration was checked by Nanodrop spectrophotometer (Thermo Scientific).

text: normal

characteristic: disease

text: scrambled shRNA

text: adipogenic differentiation

characteristic: growth condition

text: Mus musculus

characteristic: organism

text: Mus musculus

text: embryo

characteristic: organism part

characteristic: replicate

text: Mus musculus


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EPFL SV IBI-SV UPDEPLA

characteristic: INSDC center name

text: public

text: ArrayExpress

text: fibroblast

text: house mouse

characteristic: common name

characteristic: description

text: normal

text: Zfp30 knockdown by shRNA

characteristic: genotype

text: adipogenic differentiation

text: Mus musculus

text: Mus musculus

text: embryo

text: Mus musculus


text: EPFL SV IBI-SV UPDEPLA

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: IBA

text: preadipocyte

text: house mouse

text: normal

text: Zfp30 knockout

text: adipogenic differentiation

text: Mus musculus

text: Mus musculus

text: adipose tissue

text: Mus musculus

characteristic: title


text: EPFL SV IBI-SV UPDEPLA

text: public

text: ArrayExpress

characteristic: broker name

text: IBA

characteristic: cell line

text: preadipocyte

characteristic: cell type

text: house mouse

text: normal

characteristic: disease

text: wild type genotype

text: adipogenic differentiation

characteristic: growth condition

text: Mus musculus

characteristic: organism

text: Mus musculus

text: adipose tissue

text: Mus musculus


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

tag: Namespace:THE ROSLIN INSTITUTE AND ROYAL (DICK) SCHOOL OF VETERINARY STUDIES

text: cattle

text: Bos taurus

text: Bos taurus

text: Holstein-Freisian sire


text: THE ROSLIN INSTITUTE AND ROYAL (DICK) SCHOOL OF VETERINARY STUDIES

characteristic: INSDC center name

text: public

text: cattle

characteristic: common name

text: Bos taurus

text: Bos taurus

text: Holstein-Freisian sire


LMG 30378

text: LM-UGent

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: LMG 30378

text: Achromobacter sp. LMG 30378

characteristic: description

text: Belgium

characteristic: geographic location (country and/or sea)

text: LMG 30378

characteristic: isolate

text: Achromobacter sp. LMG 30378

text: Achromobacter sp. LMG 30378

text: LMG 30378

characteristic: strain

text: Achromobacter sp. LMG 30378


LMG 34111

text: LM-UGent

text: public

characteristic: INSDC status

characteristic: SRA accession

text: LMG 34111

characteristic: Submitter Id

text: Achromobacter agilis LMG 3411T

text: Russia

text: LMG 3411

text: Achromobacter agilis

text: Achromobacter agilis

text: LMG 3411

text: Achromobacter agilis LMG 3411T

characteristic: title


text: lung

text: Rhinatrema bivittatum

characteristic: ArrayExpress-SPECIES

text: SC

text: public

text: two-lined caecilian

text: Rhinatrema bivittatum

characteristic: organism

text: Rhinatrema bivittatum

characteristic: subject id


text: kidney

text: Rhinatrema bivittatum

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: two-lined caecilian

text: Rhinatrema bivittatum

text: Rhinatrema bivittatum


text: ovary

text: Rhinatrema bivittatum

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: two-lined caecilian

characteristic: common name

text: Rhinatrema bivittatum

text: Rhinatrema bivittatum


text: heart

text: Rhinatrema bivittatum

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: two-lined caecilian

text: Rhinatrema bivittatum

text: Rhinatrema bivittatum


text: muscle

text: Rhinatrema bivittatum

text: SC

text: public

text: two-lined caecilian

text: Rhinatrema bivittatum

text: Rhinatrema bivittatum


text: gills

text: Echeneis naucrates

text: SC

text: public

text: live sharksucker

text: Echeneis naucrates

text: Echeneis naucrates


text: Tasmanian devil

text: SC

text: public

text: Tasmanian devil

text: Sarcophilus harrisii

text: Sarcophilus harrisii


text: male

characteristic: ArrayExpress-SEX

text: Tasmanian devil

text: SC

text: public

text: Tasmanian devil

text: Male

characteristic: gender

text: Sarcophilus harrisii

text: Sarcophilus harrisii


text: female

text: Tasmanian devil

text: SC

text: public

characteristic: INSDC status

text: Tasmanian devil

text: Female

text: Sarcophilus harrisii

text: Sarcophilus harrisii


text: University Vienna

text: public

characteristic: SRA accession

tag: Namespace:University Vienna

text: Dumeril's clam worm

text: Platynereis dumerilii

text: Platynereis dumerilii


text: NEWCASTLE UNIVERSITY, UK

text: public

tag: Namespace:NEWCASTLE UNIVERSITY, UK

characteristic: Submitter Id

text: human

text: DNA from colorectal cancer tissue sample was extracted to carry out microsatellite instability test. MSI= microsatellite unstable and MSS= microsatellite stable. MSI status calls were originally made using fragment length analysis kit (Promega MSI Analysis v1.2)

characteristic: description

text: Homo sapiens

text: Homo sapiens


text: Cologne Merheim Medical Center

text: public

tag: Namespace:Cologne Merheim Medical Center

characteristic: collection date

text: Acinetobacter baumannii surveillance study 2017-2018

text: Germany

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: host health state

text: human

characteristic: host scientific name

text: Acinetobacter baumannii isolate 10076

characteristic: isolate

text: human

characteristic: isolation source

text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: Acinetobacter baumannii surveillance study, sample 10076

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Cologne Merheim Medical Center

characteristic: INSDC center name

text: public

text: Germany

text: not provided

text: human

text: Acinetobacter baumannii isolate 10241

text: human

text: Acinetobacter baumannii

characteristic: organism

text: Acinetobacter baumannii

text: Acinetobacter baumannii surveillance study, sample 10241


text: Cologne Merheim Medical Center

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Germany

text: not provided

text: human

text: Acinetobacter baumannii isolate 100392

text: human

text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: Acinetobacter baumannii surveillance study, sample 10392


text: Cologne Merheim Medical Center

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: description

text: Germany

text: not provided

text: human

text: Acinetobacter baumannii isolate 10446

text: human

text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: Acinetobacter baumannii surveillance study, sample 10446


text: Cologne Merheim Medical Center

text: public

characteristic: collection date

text: Germany

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: host health state

text: human

text: Acinetobacter baumannii isolate 10526

text: human

text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: Acinetobacter baumannii surveillance study, sample 10526


text: Cologne Merheim Medical Center

text: public

text: Germany

text: not provided

text: human

characteristic: host scientific name

text: Acinetobacter baumannii isolate 10711

characteristic: isolate

text: human

characteristic: isolation source

text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: Acinetobacter baumannii surveillance study, sample 10711


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Cologne Merheim Medical Center

text: public

text: Germany

text: not provided

text: human

text: Acinetobacter baumannii isolate 10712

text: human

text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: Acinetobacter baumannii surveillance study, sample 10712

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Cologne Merheim Medical Center

characteristic: INSDC center name

text: public

text: Germany

text: not provided

text: human

text: Acinetobacter baumannii isolate 100715

text: human

text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: Acinetobacter baumannii surveillance study, sample 10715


text: Cologne Merheim Medical Center

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Germany

text: not provided

text: human

text: Acinetobacter baumannii isolate 10747

text: human

text: Acinetobacter baumannii

characteristic: organism

text: Acinetobacter baumannii

text: Acinetobacter baumannii surveillance study, sample 10747


text: Cologne Merheim Medical Center

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Germany

text: not provided

text: human

text: Acinetobacter baumannii isolate 10786

text: human

text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: Acinetobacter baumannii surveillance study, sample 10786


text: Cologne Merheim Medical Center

text: public

characteristic: collection date

characteristic: description

text: Germany

characteristic: geographic location (country and/or sea)

text: not provided

text: human

text: Acinetobacter baumannii isolate 10788

text: human

text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: Acinetobacter baumannii surveillance study, sample 10788


text: Cologne Merheim Medical Center

text: public

text: Germany

text: not provided

characteristic: host health state

text: human

characteristic: host scientific name

text: Acinetobacter baumannii isolate 10862

characteristic: isolate

text: human

text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: Acinetobacter baumannii surveillance study, sample 10862


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: IBENS

text: public

text: thale cress

characteristic: common name

characteristic: cultivar

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: drought


drought

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IBENS

characteristic: INSDC center name

text: public

text: drought

text: thale cress

characteristic: ecotype

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: BI-seq

characteristic: title


control

text: IBENS

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: control

text: thale cress

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: BI-seq


text: INRA

text: public

characteristic: Submitter Id

text: Genome sequencing for investigating genetic features of one female of african fisher eagle. The library and the sequencing were made at the Plateforme de Séquençage Haut Débit I2BC (Gif-sur-Yvette 91198 France

characteristic: description

text: imago

characteristic: dev stage

text: Haliaeetus vocifer

text: Haliaeetus vocifer

text: female

characteristic: sex

text: red blood cells

characteristic: tissue type

text: Illumina Miseq paired-end sequencing (2x250) of about 600 pb fragment library made from the genome of one african fisher eagle female belonging to the species Haliaeetus vocifer.


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: INRA

text: public

text: black-chinned hummingbird

characteristic: common name

text: Genome sequencing for investigating genetic features of one female of black-chinned hummingbird. The library and the sequencing were made at the Plateforme de Séquençage Haut Débit I2BC (Gif-sur-Yvette 91198 France.

text: imago

text: Archilochus alexandri

text: Archilochus alexandri

text: female

text: pectoral muscle

text: Illumina Miseq paired-end sequencing (2x250) of about 600 pb fragment library made from the genome of one female of black-chinned hummingbird belonging to the species Archilochus alexandri


Early Sample 1

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Blizard Institute

text: public

text: Early Sample 1

tag: Namespace:Blizard Institute

text: Early

characteristic: growth stage

text: Tetrahymena thermophila SB210

characteristic: sample number

text: Tetrahymena thermophila SB210

characteristic: strain

text: Early Sample 1


Late Sample 1

text: Blizard Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Late Sample 1

text: Late

text: Tetrahymena thermophila SB210

text: Tetrahymena thermophila SB210

text: Late Sample 1

characteristic: title


Late Sample 2

text: Blizard Institute

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Late Sample 2

characteristic: Submitter Id

text: Late

text: Tetrahymena thermophila SB210

characteristic: organism

text: Tetrahymena thermophila SB210

text: Late Sample 2


text: IMEDEA

text: public

characteristic: collection date

text: Hypersaline environment

characteristic: environment (biome)

text: brines

characteristic: environment (feature)

text: brines

characteristic: environment (material)

text: Spain

characteristic: geographic location (country and/or sea)

unit: m

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: hypersaline lake metagenome

text: Dilution and Wateproof

characteristic: project name

text: hypersaline lake metagenome

text: Illumina

characteristic: sequencing method

text: Dilution and Wateproof

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: BfR

characteristic: collected by

text: Salmonella Typhimurium NGS data from Germany

characteristic: description

text: No

characteristic: environmental sample

text: Germany

text: not provided

characteristic: host health state

text: Bos primigenius taurus

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Salmonella enterica enterica

characteristic: isolate

text: faeces

characteristic: isolation source host associated

text: Salmonella enterica subsp. enterica serovar Typhimurium

text: Typhimurium

characteristic: serovar

text: Salmonella Typhimurium from food

characteristic: title


characteristic: ENA-CHECKLIST

text: SSI

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: BfR

characteristic: collection date

text: No

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: not provided

text: Broilers

text: Yes

text: Salmonella enterica enterica

characteristic: organism

text: Typhimurium

text: Salmonella Typhimurium from food


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: BfR

characteristic: collected by

characteristic: description

text: No

characteristic: environmental sample

text: Germany

text: not provided

text: Layers

text: Yes

text: Salmonella enterica enterica

text: faeces

text: Typhimurium

text: Salmonella Typhimurium from food


characteristic: ENA-CHECKLIST

text: SSI

text: public

characteristic: INSDC status

text: BfR

text: No

text: Germany

text: not provided

characteristic: host health state

text: Meleagris gallopavo Linnaeus f. domestica

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Salmonella enterica enterica

characteristic: isolate

text: faeces

characteristic: isolation source host associated

text: Typhimurium

characteristic: serovar

text: Salmonella Typhimurium from food

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SSI

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: BfR

characteristic: collection date

text: No

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: not provided

text: Layers

text: Yes

text: Salmonella enterica enterica

text: dust

characteristic: isolation source non-host-associated

characteristic: organism

text: Typhimurium

text: Salmonella Typhimurium from food


characteristic: ENA-CHECKLIST

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: BfR

characteristic: collected by

characteristic: description

text: No

characteristic: environmental sample

text: Germany

text: not provided

characteristic: host health state

text: Layers

text: Yes

text: Salmonella enterica enterica

text: Typhimurium

text: Salmonella Typhimurium from food


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SSI

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: BfR

text: No

text: Germany

text: not provided

text: Layers

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Salmonella enterica enterica

characteristic: isolate

text: sock swab

characteristic: isolation source host associated

text: Typhimurium

characteristic: serovar

text: Salmonella Typhimurium from food

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: BfR

characteristic: collection date

text: No

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: not provided

text: Bos primigenius taurus

text: Yes

text: Salmonella enterica enterica

text: meat

characteristic: organism

text: Typhimurium

text: Salmonella Typhimurium from food


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: BfR

characteristic: collected by

characteristic: description

text: No

characteristic: environmental sample

text: Germany

text: not provided

characteristic: host health state

text: Sus domesticus

text: Yes

text: Salmonella enterica enterica

text: Product (Organs)

text: Typhimurium

text: Salmonella Typhimurium from food


characteristic: ENA-CHECKLIST

characteristic: External Id

text: SSI

text: public

characteristic: Submitter Id

text: BfR

text: No

text: Germany

text: not provided

text: Sus domesticus

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Salmonella enterica enterica

characteristic: isolate

text: product (small intestine)

characteristic: isolation source host associated

text: Typhimurium

characteristic: serovar

text: Salmonella Typhimurium from food

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: BfR

characteristic: collection date

text: No

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: not provided

text: Sus domesticus

text: Yes

text: Salmonella enterica enterica

text: other

characteristic: organism

text: Typhimurium

text: Salmonella Typhimurium from food


characteristic: ENA-CHECKLIST

characteristic: External Id

text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: BfR

characteristic: collected by

characteristic: description

text: No

characteristic: environmental sample

text: Germany

text: not provided

characteristic: host health state

text: Broilers

text: Yes

text: Salmonella enterica enterica

text: faeces

text: Typhimurium

text: Salmonella Typhimurium from food


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SSI

text: public

characteristic: Submitter Id

text: BfR

text: No

text: Germany

text: not provided

text: Bos primigenius taurus

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Salmonella enterica enterica

characteristic: isolate

text: minced meat

characteristic: isolation source host associated

text: Typhimurium

characteristic: serovar

text: Salmonella Typhimurium from food

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: BfR

characteristic: collection date

text: No

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: not provided

text: Bos primigenius taurus

text: Yes

text: Salmonella enterica enterica

characteristic: organism

text: Typhimurium

text: Salmonella Typhimurium from food


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: BfR

characteristic: collected by

characteristic: description

text: No

characteristic: environmental sample

text: Germany

text: not provided

characteristic: host health state

text: Sus domesticus

text: Yes

text: Salmonella enterica enterica

text: minced meat

text: Typhimurium

text: Salmonella Typhimurium from food


characteristic: ENA-CHECKLIST

characteristic: External Id

text: SSI

text: public

characteristic: Submitter Id

text: BfR

text: No

text: Germany

text: not provided

text: Layers

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Salmonella enterica enterica

characteristic: isolate

text: Product (Organs)

characteristic: isolation source host associated

text: Typhimurium

characteristic: serovar

text: Salmonella Typhimurium from food

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: BfR

characteristic: collection date

text: No

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: not provided

text: Sus domesticus

text: Yes

text: Salmonella enterica enterica

characteristic: organism

text: Typhimurium

text: Salmonella Typhimurium from food


characteristic: ENA-CHECKLIST

characteristic: External Id

text: SSI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: BfR

characteristic: collected by

characteristic: description

text: No

characteristic: environmental sample

text: Germany

text: not provided

characteristic: host health state

text: Sus domesticus

text: Yes

text: Salmonella enterica enterica

text: faeces

text: Typhimurium

text: Salmonella Typhimurium from food


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SSI

text: public

characteristic: Submitter Id

text: BfR

text: No

text: Germany

text: not provided

text: Bos primigenius taurus

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

text: Salmonella enterica enterica

characteristic: isolate

text: faeces

characteristic: isolation source host associated

text: Typhimurium

characteristic: serovar

text: Salmonella Typhimurium from food

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: SSI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: BfR

characteristic: collection date

text: No

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: not provided

text: Layers

text: Yes

text: Salmonella enterica enterica

text: neck skin

characteristic: organism

text: Typhimurium

text: Salmonella Typhimurium from food


text: Klebsiella pneumoniae

characteristic: ArrayExpress-SPECIES

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Klebsiella pneumoniae

characteristic: common name

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

characteristic: subject id


characteristic: ENA-CHECKLIST

text: public

text: DTU2016_732_PRJ1055_Escherichia_coli_903_15070497

tag: Namespace:Centre for Genomic Epidemiology, National Food Institute, Technical University of Denmark (DTU), Denmark

characteristic: Submitter Id

text: DTU-GE

characteristic: broker name

text: DTU

characteristic: collected by

text: E. coli CMY-2 producing isolates from broiler meat samples

characteristic: description

text: No

characteristic: environmental sample

text: Denmark

text: not provided

characteristic: host health state

text: Gallus gallus domesticus

characteristic: host scientific name

text: Yes

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: broiler

characteristic: isolation source host associated

text: Escherichia coli

text: Escherichia coli

characteristic: title


tag: attribute

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Centre for Genomic Epidemiology, National Food Institute, Technical University of Denmark (DTU), Denmark

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: DTU2016_765_PRJ1055_Escherichia_coli_903_15106734

text: DTU-GE

text: DTU

characteristic: collection date

text: No

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: not provided

text: Gallus gallus domesticus

text: Yes

text: broiler

text: Escherichia coli

characteristic: organism

text: Escherichia coli


characteristic: ENA-CHECKLIST

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: DTU-GE

characteristic: broker name

text: DTU

characteristic: collected by

characteristic: description

text: No

characteristic: environmental sample

text: Denmark

text: not provided

characteristic: host health state

text: Gallus gallus domesticus

text: Yes

text: broiler

text: Escherichia coli

text: Escherichia coli


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: European Food safety authority

characteristic: INSDC center name

text: public

tag: Namespace:European Food safety authority

characteristic: isolate

text: animal

characteristic: isolation source

text: Salmonella enterica subsp. enterica serovar Enteritidis

text: Enteritidis

characteristic: serovar

text: EFSA ECDC Compare pilot mock

characteristic: title


characteristic: ENA-CHECKLIST

text: European Food safety authority

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: collection date

text: food

characteristic: organism

text: Enteritidis

text: EFSA ECDC Compare pilot mock


text: European Food safety authority

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: animal

text: Salmonella enterica

text: Salmonella enterica

text: Enteritidis

text: EFSA ECDC Compare pilot mock


text: European Food safety authority

text: public

text: Food

text: Salmonella enterica subsp. enterica

text: Salmonella enterica subsp. enterica

text: Enteritidis

text: EFSA ECDC Compare pilot mock


E-MTAB-6998:Sample 11

text: public

text: E-MTAB-6998:Sample 11

tag: Namespace:Biotech Research & Innovation Centre (BRIC), University of Copenhagen

text: ArrayExpress

characteristic: broker name

text: mesenchymal stem cell of the bone marrow

characteristic: cell type

text: human

characteristic: common name

text: Protocols: To retrieve cells, hydrogels were degraded in 0.5 mg/mL collagenase A (Sigma, 11088793001) at 37 °C for 60 min. Human bone marrow-derived mesenchymal stromal cells (MSCs) were isolated as described previously (https://www.ncbi.nlm.nih.gov/pubmed/25020062) from bone marrow aspirates of healthy donors (n = 4) obtained during orthopedic surgical procedures after informed consent and in accordance with the local ethical committee (University Hospital Basel; Prof. Dr. Kummer; approval date 26/03/2007 Ref Number 78/07). MSCs are primary, wild type cells. MSCs were maintained in MEM alpha (with nucleosides, Gibco) supplemented with Fetal Bovine Serum (FBS) (10%, Gibco), penicillin (100 U ml-1, Gibco), streptomycin (100 µg ml-1, Gibco), and FGF-2 (5 ng ml-1, PeproTech) at 37°C in a humidified atmosphere at 5% CO2. Mesenchymal stem cells were grown in PEG hydrogels for 7 days in the presence of 2% serum plus serum-free media or a breast cancer cell secretome. Total RNA was isolated from cells using the RNeasy Micro Kit following the manufacturer’s instructions (Qiagen, 74004). We used NEBNext Ultra RNA Library Prep Kit with PolyA selection for library preparation. A detailed protocol can be found here https://www.neb.com/-/media/catalog/Datacards%20or%20Manuals/manualE7530.pdf.

characteristic: description

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: poly(ethylene glycol) hydrogel

characteristic: growth condition

text: Homo sapiens

text: Homo sapiens

text: bone marrow

characteristic: organism part

text: Homo sapiens

text: MCF-7 secretome

characteristic: stimulus

text: Sample 11


E-MTAB-6998:Sample 17

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Biotech Research & Innovation Centre (BRIC), University of Copenhagen

characteristic: INSDC center name

text: public

text: E-MTAB-6998:Sample 17

text: ArrayExpress

text: human

text: normal

text: wild type genotype

text: poly(ethylene glycol) hydrogel

text: Homo sapiens

text: Homo sapiens

text: bone marrow

text: Homo sapiens

text: MCF-7 secretome

text: Sample 17

characteristic: title


E-MTAB-6998:Sample 23

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6998:Sample 23

text: ArrayExpress

text: human

text: normal

text: wild type genotype

text: poly(ethylene glycol) hydrogel

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: bone marrow

text: Homo sapiens

text: MCF-7 secretome

text: Sample 23


E-MTAB-6998:Sample 5

text: public

text: E-MTAB-6998:Sample 5

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: cell type

text: human

characteristic: common name

characteristic: description

text: normal

text: wild type genotype

text: poly(ethylene glycol) hydrogel

text: Homo sapiens

text: Homo sapiens

text: bone marrow

text: Homo sapiens

text: MCF-7 secretome

text: Sample 5


E-MTAB-6998:Sample 10

text: public

text: E-MTAB-6998:Sample 10

text: ArrayExpress

text: human

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: poly(ethylene glycol) hydrogel

characteristic: growth condition

text: Homo sapiens

text: Homo sapiens

text: bone marrow

characteristic: organism part

text: Homo sapiens

text: MDA-MB-231 bone-tropic secretome

characteristic: stimulus

text: Sample 10


E-MTAB-6998:Sample 16

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-6998:Sample 16

text: ArrayExpress

text: human

text: normal

text: wild type genotype

text: poly(ethylene glycol) hydrogel

text: Homo sapiens

text: Homo sapiens

text: bone marrow

text: Homo sapiens

text: MDA-MB-231 bone-tropic secretome

text: Sample 16


E-MTAB-6998:Sample 22

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6998:Sample 22

text: ArrayExpress

text: human

text: normal

text: wild type genotype

text: poly(ethylene glycol) hydrogel

text: Homo sapiens

text: Homo sapiens

text: bone marrow

text: Homo sapiens

text: MDA-MB-231 bone-tropic secretome

text: Sample 22

characteristic: title


E-MTAB-6998:Sample 4

text: public

text: E-MTAB-6998:Sample 4

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: cell type

text: human

characteristic: common name

text: normal

text: wild type genotype

text: poly(ethylene glycol) hydrogel

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: bone marrow

text: Homo sapiens

text: MDA-MB-231 bone-tropic secretome

text: Sample 4


E-MTAB-6998:Sample 14

text: public

text: E-MTAB-6998:Sample 14

text: ArrayExpress

text: human

characteristic: description

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: poly(ethylene glycol) hydrogel

characteristic: growth condition

text: Homo sapiens

text: Homo sapiens

text: bone marrow

characteristic: organism part

text: Homo sapiens

text: MDA-MB-231 brain-tropic secretome

text: Sample 14


E-MTAB-6998:Sample 2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-6998:Sample 2

text: ArrayExpress

text: human

text: normal

text: wild type genotype

text: poly(ethylene glycol) hydrogel

text: Homo sapiens

text: Homo sapiens

text: bone marrow

text: Homo sapiens

text: MDA-MB-231 brain-tropic secretome

characteristic: stimulus

text: Sample 2


E-MTAB-6998:Sample 20

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6998:Sample 20

text: ArrayExpress

text: human

text: normal

text: wild type genotype

text: poly(ethylene glycol) hydrogel

text: Homo sapiens

text: Homo sapiens

text: bone marrow

text: Homo sapiens

text: MDA-MB-231 brain-tropic secretome

text: Sample 20


E-MTAB-6998:Sample 8

text: public

text: E-MTAB-6998:Sample 8

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: cell type

text: human

characteristic: common name

text: normal

text: wild type genotype

text: poly(ethylene glycol) hydrogel

text: Homo sapiens

text: Homo sapiens

text: bone marrow

text: Homo sapiens

text: MDA-MB-231 brain-tropic secretome

text: Sample 8

characteristic: title


E-MTAB-6998:Sample 15

text: public

text: E-MTAB-6998:Sample 15

text: ArrayExpress

text: human

characteristic: description

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: poly(ethylene glycol) hydrogel

characteristic: growth condition

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: bone marrow

text: Homo sapiens

text: MDA-MB-231 lung-tropic secretome

text: Sample 15


E-MTAB-6998:Sample 21

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-6998:Sample 21

text: ArrayExpress

text: human

text: normal

text: wild type genotype

text: poly(ethylene glycol) hydrogel

text: Homo sapiens

text: Homo sapiens

text: bone marrow

characteristic: organism part

text: Homo sapiens

text: MDA-MB-231 lung-tropic secretome

text: Sample 21


E-MTAB-6998:Sample 3

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-6998:Sample 3

text: ArrayExpress

text: human

text: normal

text: wild type genotype

text: poly(ethylene glycol) hydrogel

text: Homo sapiens

text: Homo sapiens

text: bone marrow

text: Homo sapiens

text: MDA-MB-231 lung-tropic secretome

characteristic: stimulus

text: Sample 3


E-MTAB-6998:Sample 9

text: public

characteristic: SRA accession

text: E-MTAB-6998:Sample 9

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: cell type

text: human

characteristic: common name

text: normal

text: wild type genotype

text: poly(ethylene glycol) hydrogel

text: Homo sapiens

text: Homo sapiens

text: bone marrow

text: Homo sapiens

text: MDA-MB-231 lung-tropic secretome

text: Sample 9


E-MTAB-6998:Sample 1

text: public

text: E-MTAB-6998:Sample 1

text: ArrayExpress

text: human

characteristic: description

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: poly(ethylene glycol) hydrogel

characteristic: growth condition

text: Homo sapiens

text: Homo sapiens

text: bone marrow

text: Homo sapiens

text: MDA-MB-231 parental secretome

text: Sample 1

characteristic: title


E-MTAB-6998:Sample 13

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-6998:Sample 13

text: ArrayExpress

text: human

text: normal

text: wild type genotype

text: poly(ethylene glycol) hydrogel

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: bone marrow

text: Homo sapiens

text: MDA-MB-231 parental secretome

text: Sample 13


E-MTAB-6998:Sample 19

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-6998:Sample 19

text: ArrayExpress

text: human

text: normal

text: wild type genotype

text: poly(ethylene glycol) hydrogel

text: Homo sapiens

text: Homo sapiens

text: bone marrow

characteristic: organism part

text: Homo sapiens

text: MDA-MB-231 parental secretome

text: Sample 19


E-MTAB-6998:Sample 7

text: public

characteristic: SRA accession

text: E-MTAB-6998:Sample 7

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: cell type

text: human

text: normal

text: wild type genotype

text: poly(ethylene glycol) hydrogel

text: Homo sapiens

text: Homo sapiens

text: bone marrow

text: Homo sapiens

text: MDA-MB-231 parental secretome

characteristic: stimulus

text: Sample 7


E-MTAB-6998:Sample 12

text: public

text: E-MTAB-6998:Sample 12

text: ArrayExpress

text: human

characteristic: common name

characteristic: description

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: poly(ethylene glycol) hydrogel

characteristic: growth condition

text: Homo sapiens

text: Homo sapiens

text: bone marrow

text: Homo sapiens

text: serum-free media control

text: Sample 12