characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10333:10333.Manaus.3752.1313813

characteristic: Submitter Id

text: FALSE

characteristic: age

text: years

characteristic: age unit

text: not provided

text: daily

text: FALSE

text: 12/16/13 0:00

text: GAZ:Brazil

text: skin r arm

text: TRUE

text: right

text: FALSE

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-skin

characteristic: env package

text: sebum

text: mestizo

characteristic: ethnicity

text: TRUE

characteristic: fans

text: Brazil:Manaus

text: sking micose (back)

characteristic: height or length

text: UBERON:skin

characteristic: host body habitat

text: UBERON:sebum

characteristic: host body product

text: UBERON:arm skin

characteristic: host body site

text: human

characteristic: host common name

characteristic: host taxid

text: FALSE

text: two years ago

text: yes

characteristic: multilevel

text: human skin metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

text: skin

text: human skin metagenome

text: male

characteristic: sex

text: Homo sapiens

characteristic: species name

text: FALSE

text: yes

text: Manaus

text: TRUE

text: municipal

text: FALSE


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10333:10333.Manaus.3757.1313592

characteristic: Submitter Id

text: TRUE

text: not provided

characteristic: age

text: years

characteristic: anonymized name

text: not provided

characteristic: cats

text: 2x week

text: TRUE

characteristic: collection date

text: 12/16/13 0:00

text: GAZ:Brazil

characteristic: country

text: wall

characteristic: description

text: TRUE

characteristic: dogs

text: TRUE

characteristic: dryer

characteristic: elevation

text: urban biome

text: building

text: built environment

text: dust

text: FALSE

text: Brazil:Manaus

characteristic: geo loc name

characteristic: host subject id

text: TRUE

characteristic: latitude

characteristic: longitude

text: ceramic

characteristic: material

text: no

text: indoor metagenome

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: wall

characteristic: sample type

text: indoor metagenome

text: FALSE

characteristic: temp

characteristic: title

text: Dominguez Sloan SAWesternization gradient

text: Manaus

characteristic: village

text: TRUE

characteristic: washer

text: municipal

text: TRUE

characteristic: wireless


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10333:10333.Manaus.3758.1313621

characteristic: Submitter Id

text: FALSE

text: not provided

characteristic: age

text: years

characteristic: age unit

characteristic: anonymized name

text: not provided

characteristic: cats

text: 1 week

text: FALSE

characteristic: collection date

text: 12/16/13 0:00

text: GAZ:Brazil

characteristic: country

text: floor

text: TRUE

text: FALSE

text: urban biome

characteristic: env biome

text: building

characteristic: env feature

text: built environment

characteristic: env package

text: dust

text: TRUE

characteristic: fans

text: Brazil:Manaus

text: FALSE

text: ceramic

text: no

characteristic: multilevel

text: indoor metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

text: floor

text: indoor metagenome

text: FALSE

text: Manaus

text: TRUE

text: municipal

text: FALSE


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: qiita_sid_10333:10333.Manaus.3760.1313915

text: FALSE

text: not provided

text: years

text: not provided

text: daily

text: FALSE

text: 12/16/13 0:00

text: GAZ:Brazil

text: faucet

characteristic: description

text: TRUE

characteristic: dogs

text: FALSE

characteristic: dryer

characteristic: elevation

text: urban biome

text: building

text: built environment

text: dust

text: TRUE

text: Brazil:Manaus

characteristic: geo loc name

characteristic: host subject id

text: FALSE

characteristic: latitude

characteristic: longitude

text: metal

characteristic: material

text: no

text: indoor metagenome

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: faucet

characteristic: sample type

text: indoor metagenome

text: FALSE

characteristic: temp

characteristic: title

text: Manaus

characteristic: village

text: TRUE

characteristic: washer

text: municipal

text: FALSE

characteristic: wireless


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10333:10333.Manaus.3761.1313942

characteristic: Submitter Id

text: TRUE

text: not provided

characteristic: age

text: years

characteristic: age unit

characteristic: anonymized name

text: not provided

characteristic: cats

text: 2x week

text: TRUE

characteristic: collection date

text: 12/16/13 0:00

text: GAZ:Brazil

characteristic: country

text: wall

text: TRUE

text: TRUE

text: urban biome

characteristic: env biome

text: building

characteristic: env feature

text: built environment

characteristic: env package

text: dust

text: FALSE

characteristic: fans

text: Brazil:Manaus

text: TRUE

text: ceramic

text: no

characteristic: multilevel

text: indoor metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

text: wall

text: indoor metagenome

text: FALSE

text: Manaus

text: TRUE

text: municipal

text: TRUE


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: qiita_sid_10333:10333.Manaus.3762.1313508

text: FALSE

text: not provided

text: years

text: not provided

text: 1 week

text: FALSE

text: 12/16/13 0:00

text: GAZ:Brazil

text: floor

characteristic: description

text: TRUE

characteristic: dogs

text: FALSE

characteristic: dryer

characteristic: elevation

text: urban biome

text: building

text: built environment

text: dust

text: TRUE

text: Brazil:Manaus

characteristic: geo loc name

characteristic: host subject id

text: FALSE

characteristic: latitude

characteristic: longitude

text: ceramic

characteristic: material

text: no

text: indoor metagenome

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: floor

characteristic: sample type

text: indoor metagenome

text: FALSE

characteristic: temp

characteristic: title

text: Manaus

characteristic: village

text: TRUE

characteristic: washer

text: municipal

text: FALSE

characteristic: wireless


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10333:10333.Manaus.3763.1313656

characteristic: Submitter Id

text: TRUE

text: not provided

characteristic: age

text: years

characteristic: age unit

characteristic: anonymized name

text: not provided

characteristic: cats

text: 2 week

text: TRUE

characteristic: collection date

text: 12/16/13 0:00

text: GAZ:Brazil

characteristic: country

text: bed

text: TRUE

text: FALSE

text: urban biome

characteristic: env biome

text: building

characteristic: env feature

text: built environment

characteristic: env package

text: dust

text: TRUE

characteristic: fans

text: Brazil:Manaus

text: FALSE

text: fabric

text: no

characteristic: multilevel

text: indoor metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

text: bed

text: indoor metagenome

text: FALSE

text: Manaus

text: TRUE

text: municipal

text: TRUE


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: qiita_sid_10333:10333.Manaus.3764.1313301

text: TRUE

text: not provided

text: years

text: not provided

text: 2x week

text: TRUE

text: 12/16/13 0:00

text: GAZ:Brazil

text: wall

characteristic: description

text: TRUE

characteristic: dogs

text: TRUE

characteristic: dryer

characteristic: elevation

text: urban biome

text: building

text: built environment

text: dust

text: FALSE

text: Brazil:Manaus

characteristic: geo loc name

characteristic: host subject id

text: TRUE

characteristic: latitude

characteristic: longitude

text: panited

characteristic: material

text: no

text: indoor metagenome

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: wall

characteristic: sample type

text: indoor metagenome

text: FALSE

characteristic: temp

characteristic: title

text: Manaus

characteristic: village

text: TRUE

characteristic: washer

text: municipal

text: TRUE

characteristic: wireless


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10333:10333.Manaus.3765.1313345

characteristic: Submitter Id

text: FALSE

characteristic: age

text: years

characteristic: age unit

characteristic: anonymized name

text: not provided

characteristic: cats

text: 1 week

text: FALSE

characteristic: collection date

text: 12/16/13 0:00

text: GAZ:Brazil

characteristic: country

text: floor

text: TRUE

text: FALSE

text: urban biome

characteristic: env biome

text: building

characteristic: env feature

text: built environment

characteristic: env package

text: dust

text: TRUE

characteristic: fans

text: Brazil:Manaus

text: FALSE

text: ceramic

text: no

characteristic: multilevel

text: indoor metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

text: floor

text: indoor metagenome

text: FALSE

text: Manaus

text: TRUE

text: municipal

text: FALSE


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: qiita_sid_10333:10333.Manaus.3766.1313585

text: TRUE

text: not provided

text: years

text: not provided

text: 2x week

text: TRUE

text: 12/16/13 0:00

text: GAZ:Brazil

text: wall

characteristic: description

text: TRUE

characteristic: dogs

text: TRUE

characteristic: dryer

characteristic: elevation

text: urban biome

text: building

text: built environment

text: dust

text: FALSE

text: Brazil:Manaus

characteristic: geo loc name

characteristic: host subject id

text: TRUE

characteristic: latitude

characteristic: longitude

text: painted

characteristic: material

text: no

text: indoor metagenome

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: wall

characteristic: sample type

text: indoor metagenome

text: FALSE

characteristic: temp

characteristic: title

text: Manaus

characteristic: village

text: TRUE

characteristic: washer

text: municipal

text: TRUE

characteristic: wireless


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10333:10333.Manaus.3767.1313353

characteristic: Submitter Id

text: FALSE

characteristic: age

text: years

characteristic: age unit

characteristic: anonymized name

text: not provided

characteristic: cats

text: 1 week

text: FALSE

characteristic: collection date

text: 12/16/13 0:00

text: GAZ:Brazil

characteristic: country

text: floor

text: TRUE

text: FALSE

text: urban biome

characteristic: env biome

text: building

characteristic: env feature

text: built environment

characteristic: env package

text: dust

text: TRUE

characteristic: fans

text: Brazil:Manaus

text: FALSE

text: ceramic

text: no

characteristic: multilevel

text: indoor metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

text: floor

text: indoor metagenome

text: FALSE

text: Manaus

text: TRUE

text: municipal

text: FALSE


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: years

text: blankA

text: GAZ:United States of America

text: blankA

characteristic: description

text: TRUE

characteristic: elevation

text: urban biome

text: research facility

text: misc environment

text: sterile water

text: USA:CO:Boulder

characteristic: geo loc name

text: metagenomes

characteristic: height or length

text: blankA

characteristic: host subject id

characteristic: latitude

characteristic: longitude

text: metagenome

text: blankA

text: UCSD

text: FALSE

text: TRUE

characteristic: public

text: control blank

characteristic: sample type

text: metagenome

characteristic: title


E-MTAB-6584:Sample 1

text: Institute of Healthy Ageing,

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6584:Sample 1

tag: Namespace:Institute of Healthy Ageing,

characteristic: Submitter Id

unit: day

characteristic: age

text: ArrayExpress

characteristic: broker name

text: fruit fly

characteristic: common name

text: Protocols: Dissection into RNAlater solution Dissected 6h into the light cycle into ice-cold RNAlater. The base (1SY) medium contained 100 g/l autolysed yeast (MP Biomedicals, OH, USA), 50 g/l sucrose (Tate & Lyle, London, UK), 15 g/l agar (Sigma-Aldrich, Dorset, UK), 30 ml/l nipagin (Chemlink Specialities, Dorset, UK), and 3 ml/l propionic acid (Sigma-Aldrich, Dorset, UK). The EAA-replete control medium comprised DR food with an EAA supplement dissolved in pH 4.5 water (final concentrations in fly media: L-arginine 0.43 g/l, L-histidine 0.21 g/l, L-isoleucine 0.34 g/l, L-leucine 0.48 g/l, L-lysine 0.52 g/l, L-methionine 0.1 g/l, L-phenylalanine 0.26 g/l, L-threonine 0.37 g/l, L-tryptophan 0.09 g/l, L-valine 0.4 g/l: all suppled by Sigma). EAA+rapamycin food consisted of EAA-replete medium with a rapamycin supplement (LC laboratories, MA, USA) dissolved in ethanol, to a final concentration of 200 µM in the diet. Outbred wild-type Dahomey flies bearing the endosymbiont Wolbachia were cultured on a 12:12 light cycle at 25oC and 60% humidity, on 1SY medium. All flies were maintained at large population sizes to maintain outbred genetic diversity. Eggs were collected following an 18h lay on grape juice agar, added to bottles of 1SY at a standardised density and cultured to adulthood. Newly emerged experimental females were mated on fresh food for 48h, lightly CO2 anaesthetised, then allocated to experimental diets without males (10 females/vial). Qiagen total RNA isolation kit Illumina TruSeq Stranded mRNA Sample Prep kit

text: adult

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Drosophila melanogaster

characteristic: organism

text: Drosophila melanogaster

text: brain

characteristic: organism part

text: Drosophila melanogaster

text: female

characteristic: sex

text: Dahomey, Wolbachia +ve

characteristic: strain

text: Sample 1


E-MTAB-6584:Sample 10

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institute of Healthy Ageing,

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-6584:Sample 10

text: ArrayExpress

text: fruit fly

characteristic: description

text: adult

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: ovary

text: Drosophila melanogaster

text: female

text: Dahomey, Wolbachia +ve

text: Sample 10


E-MTAB-6584:Sample 11

text: Institute of Healthy Ageing,

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6584:Sample 11

characteristic: Submitter Id

text: ArrayExpress

text: fruit fly

text: adult

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: ovary

text: Drosophila melanogaster

text: female

text: Dahomey, Wolbachia +ve

text: Sample 11

characteristic: title


E-MTAB-6584:Sample 12

text: Institute of Healthy Ageing,

text: public

text: E-MTAB-6584:Sample 12

characteristic: age

text: ArrayExpress

characteristic: broker name

text: fruit fly

characteristic: common name

text: adult

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: ovary

text: Drosophila melanogaster

text: female

text: Dahomey, Wolbachia +ve

text: Sample 12


E-MTAB-6584:Sample 14

characteristic: ENA-CHECKLIST

text: Institute of Healthy Ageing,

text: public

text: E-MTAB-6584:Sample 14

text: ArrayExpress

text: fruit fly

text: adult

text: wild type genotype

text: Drosophila melanogaster

characteristic: organism

text: Drosophila melanogaster

text: gut

characteristic: organism part

text: Drosophila melanogaster

text: female

characteristic: sex

text: Dahomey, Wolbachia +ve

characteristic: strain

text: Sample 14


E-MTAB-6584:Sample 15

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institute of Healthy Ageing,

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-6584:Sample 15

text: ArrayExpress

text: fruit fly

text: adult

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: gut

text: Drosophila melanogaster

text: female

text: Dahomey, Wolbachia +ve

text: Sample 15


E-MTAB-6584:Sample 16

text: Institute of Healthy Ageing,

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6584:Sample 16

characteristic: Submitter Id

text: ArrayExpress

text: fruit fly

characteristic: description

text: adult

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: thorax

text: Drosophila melanogaster

text: female

text: Dahomey, Wolbachia +ve

text: Sample 16


E-MTAB-6584:Sample 17

text: Institute of Healthy Ageing,

text: public

text: E-MTAB-6584:Sample 17

characteristic: age

text: ArrayExpress

characteristic: broker name

text: fruit fly

characteristic: common name

text: adult

characteristic: developmental stage

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: thorax

text: Drosophila melanogaster

text: female

text: Dahomey, Wolbachia +ve

text: Sample 17

characteristic: title


E-MTAB-6584:Sample 18

characteristic: ENA-CHECKLIST

text: Institute of Healthy Ageing,

text: public

text: E-MTAB-6584:Sample 18

text: ArrayExpress

text: fruit fly

text: adult

text: wild type genotype

characteristic: genotype

text: Drosophila melanogaster

characteristic: organism

text: Drosophila melanogaster

text: thorax

characteristic: organism part

text: Drosophila melanogaster

text: female

characteristic: sex

text: Dahomey, Wolbachia +ve

text: Sample 18


E-MTAB-6584:Sample 19

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institute of Healthy Ageing,

characteristic: INSDC center name

text: public

text: E-MTAB-6584:Sample 19

text: ArrayExpress

text: fruit fly

text: adult

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: brain

text: Drosophila melanogaster

text: female

text: Dahomey, Wolbachia +ve

characteristic: strain

text: Sample 19


E-MTAB-6584:Sample 2

text: Institute of Healthy Ageing,

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6584:Sample 2

characteristic: Submitter Id

text: ArrayExpress

text: fruit fly

text: adult

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: brain

text: Drosophila melanogaster

text: female

text: Dahomey, Wolbachia +ve

text: Sample 2


E-MTAB-6584:Sample 20

text: Institute of Healthy Ageing,

text: public

text: E-MTAB-6584:Sample 20

characteristic: age

text: ArrayExpress

characteristic: broker name

text: fruit fly

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: brain

text: Drosophila melanogaster

text: female

text: Dahomey, Wolbachia +ve

text: Sample 20


E-MTAB-6584:Sample 21

characteristic: ENA-CHECKLIST

text: Institute of Healthy Ageing,

text: public

text: E-MTAB-6584:Sample 21

text: ArrayExpress

text: fruit fly

text: adult

text: wild type genotype

characteristic: genotype

text: Drosophila melanogaster

characteristic: organism

text: Drosophila melanogaster

text: brain

characteristic: organism part

text: Drosophila melanogaster

text: female

text: Dahomey, Wolbachia +ve

text: Sample 21

characteristic: title


E-MTAB-6584:Sample 22

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institute of Healthy Ageing,

characteristic: INSDC center name

text: public

text: E-MTAB-6584:Sample 22

text: ArrayExpress

text: fruit fly

text: adult

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: thorax

text: Drosophila melanogaster

text: female

characteristic: sex

text: Dahomey, Wolbachia +ve

text: Sample 22


E-MTAB-6584:Sample 23

text: Institute of Healthy Ageing,

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6584:Sample 23

text: ArrayExpress

text: fruit fly

text: adult

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: thorax

text: Drosophila melanogaster

text: female

text: Dahomey, Wolbachia +ve

characteristic: strain

text: Sample 23


E-MTAB-6584:Sample 24

text: Institute of Healthy Ageing,

text: public

text: E-MTAB-6584:Sample 24

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: fruit fly

characteristic: common name

characteristic: description

text: adult

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: thorax

text: Drosophila melanogaster

text: female

text: Dahomey, Wolbachia +ve

text: Sample 24


E-MTAB-6584:Sample 28

characteristic: ENA-CHECKLIST

text: Institute of Healthy Ageing,

text: public

text: E-MTAB-6584:Sample 28

text: ArrayExpress

text: fruit fly

text: adult

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Drosophila melanogaster

characteristic: organism

text: Drosophila melanogaster

text: brain

characteristic: organism part

text: Drosophila melanogaster

text: female

text: Dahomey, Wolbachia +ve

text: Sample 28


E-MTAB-6584:Sample 29

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institute of Healthy Ageing,

characteristic: INSDC center name

text: public

text: E-MTAB-6584:Sample 29

text: ArrayExpress

text: fruit fly

text: adult

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: brain

text: Drosophila melanogaster

text: female

text: Dahomey, Wolbachia +ve

text: Sample 29

characteristic: title


E-MTAB-6584:Sample 3

text: Institute of Healthy Ageing,

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6584:Sample 3

text: ArrayExpress

text: fruit fly

text: adult

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: brain

text: Drosophila melanogaster

text: female

characteristic: sex

text: Dahomey, Wolbachia +ve

text: Sample 3


E-MTAB-6584:Sample 30

text: Institute of Healthy Ageing,

text: public

text: E-MTAB-6584:Sample 30

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: fruit fly

characteristic: common name

text: adult

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: brain

text: Drosophila melanogaster

text: female

text: Dahomey, Wolbachia +ve

characteristic: strain

text: Sample 30


E-MTAB-6584:Sample 31

characteristic: ENA-CHECKLIST

text: Institute of Healthy Ageing,

text: public

text: E-MTAB-6584:Sample 31

text: ArrayExpress

text: fruit fly

characteristic: description

text: adult

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Drosophila melanogaster

characteristic: organism

text: Drosophila melanogaster

text: ovary

text: Drosophila melanogaster

text: female

text: Dahomey, Wolbachia +ve

text: Sample 31


E-MTAB-6584:Sample 32

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institute of Healthy Ageing,

characteristic: INSDC center name

text: public

text: E-MTAB-6584:Sample 32

text: ArrayExpress

text: fruit fly

text: adult

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: ovary

characteristic: organism part

text: Drosophila melanogaster

text: female

text: Dahomey, Wolbachia +ve

text: Sample 32


E-MTAB-6584:Sample 33

text: Institute of Healthy Ageing,

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6584:Sample 33

text: ArrayExpress

text: fruit fly

text: adult

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: ovary

text: Drosophila melanogaster

text: female

text: Dahomey, Wolbachia +ve

text: Sample 33

characteristic: title


E-MTAB-6584:Sample 34

text: Institute of Healthy Ageing,

text: public

text: E-MTAB-6584:Sample 34

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: fruit fly

characteristic: common name

text: adult

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: arthropod fat body

text: Drosophila melanogaster

text: female

characteristic: sex

text: Dahomey, Wolbachia +ve

text: Sample 34


E-MTAB-6584:Sample 35

characteristic: ENA-CHECKLIST

text: Institute of Healthy Ageing,

text: public

text: E-MTAB-6584:Sample 35

text: ArrayExpress

text: fruit fly

characteristic: description

text: adult

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: arthropod fat body

text: Drosophila melanogaster

text: female

text: Dahomey, Wolbachia +ve

characteristic: strain

text: Sample 35


E-MTAB-6584:Sample 36

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institute of Healthy Ageing,

characteristic: INSDC center name

text: public

text: E-MTAB-6584:Sample 36

text: ArrayExpress

text: fruit fly

text: adult

text: wild type genotype

text: Drosophila melanogaster

characteristic: organism

text: Drosophila melanogaster

text: arthropod fat body

text: Drosophila melanogaster

text: female

text: Dahomey, Wolbachia +ve

text: Sample 36


E-MTAB-6584:Sample 37

text: Institute of Healthy Ageing,

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6584:Sample 37

text: ArrayExpress

text: fruit fly

text: adult

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: ovary

characteristic: organism part

text: Drosophila melanogaster

text: female

text: Dahomey, Wolbachia +ve

text: Sample 37


E-MTAB-6584:Sample 38

text: Institute of Healthy Ageing,

text: public

text: E-MTAB-6584:Sample 38

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: fruit fly

characteristic: common name

text: adult

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: ovary

text: Drosophila melanogaster

text: female

text: Dahomey, Wolbachia +ve

text: Sample 38

characteristic: title


E-MTAB-6584:Sample 39

characteristic: ENA-CHECKLIST

text: Institute of Healthy Ageing,

text: public

text: E-MTAB-6584:Sample 39

text: ArrayExpress

text: fruit fly

characteristic: description

text: adult

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: ovary

text: Drosophila melanogaster

text: female

characteristic: sex

text: Dahomey, Wolbachia +ve

text: Sample 39


E-MTAB-6584:Sample 4

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institute of Healthy Ageing,

characteristic: INSDC center name

text: public

text: E-MTAB-6584:Sample 4

text: ArrayExpress

text: fruit fly

text: adult

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: gut

text: Drosophila melanogaster

text: female

text: Dahomey, Wolbachia +ve

characteristic: strain

text: Sample 4


E-MTAB-6584:Sample 41

text: Institute of Healthy Ageing,

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6584:Sample 41

text: ArrayExpress

text: fruit fly

text: adult

text: wild type genotype

text: Drosophila melanogaster

characteristic: organism

text: Drosophila melanogaster

text: gut

text: Drosophila melanogaster

text: female

text: Dahomey, Wolbachia +ve

text: Sample 41


E-MTAB-6584:Sample 42

text: Institute of Healthy Ageing,

text: public

text: E-MTAB-6584:Sample 42

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: fruit fly

characteristic: common name

text: adult

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: gut

characteristic: organism part

text: Drosophila melanogaster

text: female

text: Dahomey, Wolbachia +ve

text: Sample 42


E-MTAB-6584:Sample 46

characteristic: ENA-CHECKLIST

text: Institute of Healthy Ageing,

text: public

text: E-MTAB-6584:Sample 46

text: ArrayExpress

text: fruit fly

characteristic: description

text: adult

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: arthropod fat body

text: Drosophila melanogaster

text: female

text: Dahomey, Wolbachia +ve

text: Sample 46

characteristic: title


E-MTAB-6584:Sample 47

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institute of Healthy Ageing,

characteristic: INSDC center name

text: public

text: E-MTAB-6584:Sample 47

text: ArrayExpress

text: fruit fly

text: adult

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: arthropod fat body

text: Drosophila melanogaster

text: female

characteristic: sex

text: Dahomey, Wolbachia +ve

text: Sample 47


E-MTAB-6584:Sample 48

text: Institute of Healthy Ageing,

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6584:Sample 48

text: ArrayExpress

text: fruit fly

text: adult

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: arthropod fat body

text: Drosophila melanogaster

text: female

text: Dahomey, Wolbachia +ve

characteristic: strain

text: Sample 48


E-MTAB-6584:Sample 49

text: Institute of Healthy Ageing,

text: public

text: E-MTAB-6584:Sample 49

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: fruit fly

characteristic: common name

text: adult

text: wild type genotype

text: Drosophila melanogaster

characteristic: organism

text: Drosophila melanogaster

text: thorax

text: Drosophila melanogaster

text: female

text: Dahomey, Wolbachia +ve

text: Sample 49


E-MTAB-6584:Sample 5

characteristic: ENA-CHECKLIST

text: Institute of Healthy Ageing,

text: public

text: E-MTAB-6584:Sample 5

text: ArrayExpress

text: fruit fly

characteristic: description

text: adult

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: gut

characteristic: organism part

text: Drosophila melanogaster

text: female

text: Dahomey, Wolbachia +ve

text: Sample 5


E-MTAB-6584:Sample 50

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institute of Healthy Ageing,

characteristic: INSDC center name

text: public

text: E-MTAB-6584:Sample 50

text: ArrayExpress

text: fruit fly

text: adult

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: thorax

text: Drosophila melanogaster

text: female

text: Dahomey, Wolbachia +ve

text: Sample 50

characteristic: title


E-MTAB-6584:Sample 51

text: Institute of Healthy Ageing,

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6584:Sample 51

text: ArrayExpress

text: fruit fly

text: adult

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: thorax

text: Drosophila melanogaster

text: female

characteristic: sex

text: Dahomey, Wolbachia +ve

text: Sample 51


E-MTAB-6584:Sample 52

text: Institute of Healthy Ageing,

text: public

text: E-MTAB-6584:Sample 52

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: fruit fly

characteristic: common name

text: adult

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: arthropod fat body

text: Drosophila melanogaster

text: female

text: Dahomey, Wolbachia +ve

characteristic: strain

text: Sample 52


E-MTAB-6584:Sample 6

characteristic: ENA-CHECKLIST

text: Institute of Healthy Ageing,

text: public

text: E-MTAB-6584:Sample 6

text: ArrayExpress

text: fruit fly

characteristic: description

text: adult

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Drosophila melanogaster

characteristic: organism

text: Drosophila melanogaster

text: gut

text: Drosophila melanogaster

text: female

text: Dahomey, Wolbachia +ve

text: Sample 6


E-MTAB-6584:Sample 7

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institute of Healthy Ageing,

characteristic: INSDC center name

text: public

text: E-MTAB-6584:Sample 7

text: ArrayExpress

text: fruit fly

text: adult

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: arthropod fat body

characteristic: organism part

text: Drosophila melanogaster

text: female

text: Dahomey, Wolbachia +ve

text: Sample 7


E-MTAB-6584:Sample 8

text: Institute of Healthy Ageing,

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6584:Sample 8

text: ArrayExpress

text: fruit fly

text: adult

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: arthropod fat body

text: Drosophila melanogaster

text: female

text: Dahomey, Wolbachia +ve

text: Sample 8

characteristic: title


E-MTAB-6584:Sample 9

text: Institute of Healthy Ageing,

text: public

text: E-MTAB-6584:Sample 9

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: fruit fly

characteristic: common name

text: adult

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: arthropod fat body

text: Drosophila melanogaster

text: female

characteristic: sex

text: Dahomey, Wolbachia +ve

text: Sample 9


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF HELSINKI

text: public

text: CRC_AI_CRISPRko_CaCO2-timepoint-1-replica-1

tag: Namespace:UNIVERSITY OF HELSINKI

text: CRC AI CRISPRko CaCO2 timepoint 1 replicate 1

characteristic: description

text: synthetic construct

text: synthetic construct

text: CRC AI CRISPRko CaCO2 timepoint 1 replicatete 1


characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF HELSINKI

text: public

text: CRC_AI_CRISPRko_CaCO2-timepoint-1-replica-2

text: CRC AI CRISPRko CaCO2 timepoint 1 replicate 2

text: synthetic construct

characteristic: organism

text: synthetic construct


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF HELSINKI

text: public

text: CRC_AI_CRISPRko_CaCO2-timepoint-7-replica-1

text: CRC AI CRISPRko CaCO2 timepoint 7 replicate 1

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF HELSINKI

characteristic: INSDC center name

text: public

text: CRC_AI_CRISPRko_CaCO2-timepoint-7-replica-2

text: CRC AI CRISPRko CaCO2 timepoint 7 replicate 2

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF HELSINKI

characteristic: INSDC first public

text: public

text: CRC_AI_CRISPRko_COLO320dm-timepoint-1-replica-1

text: CRC AI CRISPRko COLO320dm timepoint 1 replicate 1

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF HELSINKI

characteristic: INSDC last update

text: public

text: CRC_AI_CRISPRko_COLO320dm-timepoint-1-replica-2

text: CRC AI CRISPRko COLO320dm timepoint 1 replicate 2

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF HELSINKI

text: public

characteristic: INSDC status

text: CRC_AI_CRISPRko_COLO320dm-timepoint-7-replica-1

text: CRC AI CRISPRko COLO320dm timepoint 7 replicate 1

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF HELSINKI

text: public

characteristic: SRA accession

text: CRC_AI_CRISPRko_COLO320dm-timepoint-7-replica-2

text: CRC AI CRISPRko COLO320dm timepoint 7 replicate 2

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF HELSINKI

text: public

text: CRC_AI_CRISPRko_GP5d-timepoint-1-replica-1

text: CRC AI CRISPRko GP5d timepoint 1 replicate 1

text: synthetic construct

text: synthetic construct

characteristic: title


text: UNIVERSITY OF HELSINKI

text: public

text: CRC_AI_CRISPRko_GP5d-timepoint-1-replica-2

characteristic: Submitter Id

text: CRC AI CRISPRko GP5d timepoint 1 replicate 2

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF HELSINKI

text: public

text: CRC_AI_CRISPRko_GP5d-timepoint-7-replica-1

text: CRC AI CRISPRko GP5d timepoint 7 replicate 1

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF HELSINKI

text: public

text: CRC_AI_CRISPRko_GP5d-timepoint-7-replica-2

text: CRC AI CRISPRko GP5d timepoint 7 replicate 2

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF HELSINKI

text: public

text: CRC_AI_CRISPRa_CaCO2_replica_A_timepoint_1

text: CRC AI CRISPRa CaCO2 replicate A timepoint 1

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF HELSINKI

text: public

text: CRC_AI_CRISPRa_CaCO2_replica_A_timepoint_6

text: CRC AI CRISPRa CaCO2 replicate A timepoint 6

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF HELSINKI

text: public

text: CRC_AI_CRISPRa_CaCO2_replica_B_timepoint_1

text: CRC AI CRISPRa CaCO2 replicate B timepoint 1

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF HELSINKI

text: public

text: CRC_AI_CRISPRa_CaCO2_replica_B_timepoint_6

text: CRC AI CRISPRa CaCO2 replicate B timepoint 6

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF HELSINKI

text: public

text: CRC_AI_CRISPRa_COLO320dm_replica_A_timepoint_1

text: CRC AI CRISPRa COLO320dm replicate A timepoint 1

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF HELSINKI

text: public

text: CRC_AI_CRISPRa_COLO320dm_replica_A_timepoint_5

text: CRC AI CRISPRa COLO320dm replicate A timepoint 5

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF HELSINKI

text: public

text: CRC_AI_CRISPRa_COLO320dm_replica_B_timepoint_1

text: CRC AI CRISPRa COLO320dm replicate B timepoint 1

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF HELSINKI

text: public

text: CRC_AI_CRISPRa_COLO320dm_replica_B_timepoint_5

text: CRC AI CRISPRa COLO320dm replicate B timepoint 5

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF HELSINKI

text: public

text: CRC_AI_CRISPRa_GP5d_replica_A_timepoint_1

text: CRC AI CRISPRa GP5d replicate A timepoint 1

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF HELSINKI

text: public

text: CRC_AI_CRISPRa_GP5d_replica_A_timepoint_5

text: CRC AI CRISPRa GP5d replicate A timepoint 5

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF HELSINKI

text: public

text: CRC_AI_CRISPRa_GP5d_replica_B_timepoint_1

text: CRC AI CRISPRa GP5d replicate B timepoint 1

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF HELSINKI

text: public

text: CRC_AI_CRISPRa_GP5d_replica_B_timepoint_5

text: CRC AI CRISPRa GP5d replicate B timepoint 5

text: synthetic construct

text: synthetic construct


text: public

tag: Namespace:CIIMAR - Interdisciplinary Centre of Marine and Environmental Research

characteristic: collection date

text: Soil

characteristic: environment (biome)

text: Soil from contructed wetlands

characteristic: environment (feature)

text: Soil

characteristic: environment (material)

text: Portugal

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: miscellaneous natural or artificial environment

characteristic: miscellaneous environmental package

text: soil metagenome

text: Microbial communities present in constructed wetlands microcosms

characteristic: project name

text: soil metagenome

text: pyrosequencing

characteristic: sequencing method

text: Constructed wetland soil


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CIIMAR - Interdisciplinary Centre of Marine and Environmental Research

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Soil

text: Soil from contructed wetlands

text: Soil

text: Portugal

text: metagenome

text: soil metagenome

characteristic: organism

text: soil metagenome

text: pyrosequencing

text: Constructed wetland soil


text: UNIVERSITY OF S*O PAULO

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:UNIVERSITY OF S*O PAULO

characteristic: Submitter Id

characteristic: collection date

text: Brazil

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Sputum

characteristic: isolate

text: Clinical isolates of M. tuberculosis from human patients

characteristic: isolation source

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis clinical isolates form Brazil and Mozambique

characteristic: title


characteristic: ENA-CHECKLIST

text: University of Heidelberg, Germany

text: public

tag: Namespace:University of Heidelberg, Germany

unit: week

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: Protocols: C57Bl/6 Ly5.1 male mice lethally irradiated have been transplanted at 8 weeks of age with bone marrow from Hbb(th3/+)/Tfr2(+/+) or Hbb(th3/+)/Tfr2(-/-) mice (Bone marrow in a mixed genetic background C57BL6/129Sv). After transplantation, the mice have been maintained in a standard diet for 22 weeks and euthanised for organs extraction and analysis. Mice were euthanized 22 weeks after BM transplant and the spleen was extracted and SNAP-frozen. total RNA has been extracted with Trizol mRNA-Seq libraries were created according to the Truseq stranded mRNA Illumina protocol.

characteristic: description

text: Beta-thalassemia

characteristic: disease

text: C57Bl/6 Ly5.1 BM Hbb(Th3/+)

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: spleen

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

text: transplanted with bone marrow from Tfr2 knockout mouse

characteristic: stimulus

characteristic: strain


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Heidelberg, Germany

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: house mouse

text: Beta-thalassemia

text: C57Bl/6 Ly5.1 BM Hbb(Th3/+)

text: Mus musculus

characteristic: organism

text: Mus musculus

text: spleen

text: Mus musculus

text: male

text: transplanted with bone marrow from Tfr2 wild type mouse


characteristic: ENA-CHECKLIST

text: TU Graz

text: public

tag: Namespace:TU Graz

characteristic: collection date

text: Brassicaceae

characteristic: environment (biome)

text: area of developed space with low usage intensity

characteristic: environment (feature)

text: agricultural environmental material

characteristic: environment (material)

text: Austria

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: Eruca vesicaria subsp. sativa

text: plant-associated

characteristic: plant-associated environmental package

text: Arugula microbiome

characteristic: project name

text: Eruca vesicaria subsp. sativa

text: 454 pyrosequencing

characteristic: sequencing method

text: Arugula microbiome

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ISTITUTO SUPERIORE DI SANITA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:ISTITUTO SUPERIORE DI SANITA

text: Italy

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

characteristic: isolate

text: faeces

characteristic: isolation source

text: Escherichia coli

text: Escherichia coli

characteristic: serovar


characteristic: ENA-CHECKLIST

text: ISTITUTO SUPERIORE DI SANITA

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Italy

characteristic: geographic location (country and/or sea)

text: not provided

text: bovine-swine pool

text: pool

text: Escherichia coli

characteristic: organism

text: Escherichia coli


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: ISTITUTO SUPERIORE DI SANITA

text: public

text: Denmark

text: diseased

text: Homo sapiens

text: faeces

text: Escherichia coli

text: Escherichia coli

characteristic: title


characteristic: External Id

text: ISTITUTO SUPERIORE DI SANITA

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Plasmid preparation from ED1169 strain

characteristic: description

text: Italy

text: diseased

text: Homo sapiens

text: faeces

text: Escherichia coli

text: Escherichia coli


Desulf-BES

text: Biological Engineering

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Desulf-BES

tag: Namespace:Biological Engineering

text: Desulf-BES, sulfonates degrading culture

text: uncultured Desulfovibrio sp.

text: uncultured Desulfovibrio sp.

text: Desulf-BES


E-MTAB-6614:Sample 6

text: public

text: E-MTAB-6614:Sample 6

tag: Namespace:Department of Microbiology & Immunology, University of Texas Medical Branch

text: ArrayExpress

characteristic: broker name

text: Protocols: Yellow Fever infectious clones (IC) were generated by site-directed mutagenesis (SDM) of either pANCR 17D (IC) or pANCR Asibi IC as a template. QuickChange XLII SDM kit (Strategene) along with mutagenic primer sets were used to generate infectious clones as per the manufacturer’s protocol. Stock cDNA YF IC were amplified in E. coli (MC1061) and plasmid harvested by large-scale extraction. Full-length YF RNA was generated by in vitro transcription of purified cDNA using SP6-Scribe standard RNA in vitro transctiption kit (Cellscript) according to the manufacturer’s protocol; the reaction was incubated at 37oC for 2.5 hours. The entire reaction was electroporated into 6.7x106 monkey kidney Vero cells. Cell supernatant was collected when infected cells showed 80% cytopathic effect (CPE). RNA from the YF ICs were extracted using QIAamp Viral RNA mini kit (Qiagen), following the manufacturer’s guidelines. NGS libraries were constructed using TruSeq RNA v2 kit as recommended by the manufacturer.

text: 17D-204 vaccine prME swap

characteristic: genotype

text: grown in monkey kidney Vero cells

characteristic: growth condition

text: Yellow fever virus

text: Yellow fever virus

text: Yellow fever virus

text: Asibi

characteristic: strain

text: Sample 6


E-MTAB-6614:Sample 9

characteristic: ENA-CHECKLIST

text: Department of Microbiology & Immunology, University of Texas Medical Branch

text: public

characteristic: SRA accession

text: E-MTAB-6614:Sample 9

characteristic: Submitter Id

text: ArrayExpress

text: 17D-204 vaccine prME swap

text: grown in monkey kidney Vero cells

text: Yellow fever virus

text: Yellow fever virus

text: Yellow fever virus

text: Asibi

text: Sample 9


E-MTAB-6614:Sample 4

text: public

text: E-MTAB-6614:Sample 4

text: ArrayExpress

text: Asibi prME swap

text: grown in monkey kidney Vero cells

text: Yellow fever virus

characteristic: organism

text: Yellow fever virus

text: Yellow fever virus

text: Sample 4


E-MTAB-6614:Sample 8

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-6614:Sample 8

text: ArrayExpress

text: Asibi prME swap

text: grown in monkey kidney Vero cells

text: Yellow fever virus

text: Yellow fever virus

text: Yellow fever virus

text: Sample 8


E-MTAB-6614:Sample 15

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-6614:Sample 15

text: ArrayExpress

text: NS2B-I109L substitution

text: grown in monkey kidney Vero cells

text: Yellow fever virus

text: Yellow fever virus

text: Yellow fever virus

text: Asibi

text: Sample 15


E-MTAB-6614:Sample 16

text: public

text: E-MTAB-6614:Sample 16

text: ArrayExpress

text: NS2B-I109L substitution

text: grown in monkey kidney Vero cells

text: Yellow fever virus

text: Yellow fever virus

text: Yellow fever virus

text: Asibi

text: Sample 16

characteristic: title


E-MTAB-6614:Sample 11

characteristic: External Id

text: public

text: E-MTAB-6614:Sample 11

text: ArrayExpress

text: NS2B-L109I substitution

text: grown in monkey kidney Vero cells

text: Yellow fever virus

text: Yellow fever virus

text: Yellow fever virus

text: Sample 11


E-MTAB-6614:Sample 14

characteristic: INSDC center name

text: public

text: E-MTAB-6614:Sample 14

text: ArrayExpress

text: NS2B-L109I substitution

text: grown in monkey kidney Vero cells

text: Yellow fever virus

text: Yellow fever virus

text: Yellow fever virus

text: Sample 14


E-MTAB-6614:Sample 13

characteristic: INSDC first public

text: public

text: E-MTAB-6614:Sample 13

text: ArrayExpress

text: NS4B-I95M substitution

text: grown in monkey kidney Vero cells

text: Yellow fever virus

text: Yellow fever virus

text: Yellow fever virus

text: Asibi

text: Sample 13


E-MTAB-6614:Sample 7

text: public

text: E-MTAB-6614:Sample 7

text: ArrayExpress

characteristic: description

text: NS4B-I95M substitution

text: grown in monkey kidney Vero cells

text: Yellow fever virus

text: Yellow fever virus

text: Yellow fever virus

text: Asibi

text: Sample 7


E-MTAB-6614:Sample 10

characteristic: INSDC last update

text: public

text: E-MTAB-6614:Sample 10

text: ArrayExpress

text: NS4B-M95I substitution

text: grown in monkey kidney Vero cells

text: Yellow fever virus

text: Yellow fever virus

text: Yellow fever virus

text: Sample 10


E-MTAB-6614:Sample 3

text: public

characteristic: INSDC status

text: E-MTAB-6614:Sample 3

text: ArrayExpress

text: NS4B-M95I substitution

text: grown in monkey kidney Vero cells

text: Yellow fever virus

text: Yellow fever virus

text: Yellow fever virus

text: Sample 3


E-MTAB-6614:Sample 1

text: public

text: E-MTAB-6614:Sample 1

text: ArrayExpress

characteristic: broker name

text: wild type genotype

text: grown in monkey kidney Vero cells

text: Yellow fever virus

text: Yellow fever virus

text: Yellow fever virus

text: Sample 1


E-MTAB-6614:Sample 2

text: public

text: E-MTAB-6614:Sample 2

text: ArrayExpress

text: wild type genotype

characteristic: genotype

text: grown in monkey kidney Vero cells

text: Yellow fever virus

text: Yellow fever virus

text: Yellow fever virus

text: Sample 2


E-MTAB-6614:Sample 12

text: public

text: E-MTAB-6614:Sample 12

text: ArrayExpress

text: wild type genotype

text: grown in monkey kidney Vero cells

characteristic: growth condition

text: Yellow fever virus

text: Yellow fever virus

text: Yellow fever virus

text: Asibi

text: Sample 12


E-MTAB-6614:Sample 5

text: public

text: E-MTAB-6614:Sample 5

text: ArrayExpress

text: wild type genotype

text: grown in monkey kidney Vero cells

text: Yellow fever virus

text: Yellow fever virus

text: Yellow fever virus

text: Asibi

characteristic: strain

text: Sample 5


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF COLOGNE

text: public

tag: Namespace:UNIVERSITY OF COLOGNE

text: not provided

characteristic: collection date

text: Croatia, , Zagreb

characteristic: country

text: No

characteristic: host associated

text: Acinetobacter baumannii

text: Acinetobacter baumannii


characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF COLOGNE

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: May 18, 2016

text: Croatia, , Zagreb

text: No

text: Acinetobacter baumannii

characteristic: organism

text: Acinetobacter baumannii


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COLOGNE

characteristic: INSDC center name

text: public

text: Jul 2, 2015

text: Croatia, , Zagreb

text: environmental

characteristic: host

text: Yes

text: activated

characteristic: isolation source host associated

text: Acinetobacter baumannii

text: Acinetobacter baumannii

characteristic: title


text: UNIVERSITY OF COLOGNE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Mar 23, 2016

text: Croatia, , Zagreb

text: environmental

text: Yes

text: activated

text: Acinetobacter baumannii

text: Acinetobacter baumannii


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF COLOGNE

text: public

text: Feb 24, 2016

text: Croatia, , Zagreb

text: environmental

text: Yes

text: activated

text: Acinetobacter baumannii

text: Acinetobacter baumannii


text: UNIVERSITY OF COLOGNE

text: public

text: Jun 8, 2016

characteristic: collection date

text: Croatia, , Zagreb

text: environmental

text: Yes

text: digested

text: Acinetobacter baumannii

text: Acinetobacter baumannii


text: UNIVERSITY OF COLOGNE

text: public

text: Jul 2, 2015

text: Croatia, , Zagreb

characteristic: country

text: environmental

text: Yes

text: digested

text: Acinetobacter baumannii

text: Acinetobacter baumannii


text: UNIVERSITY OF COLOGNE

text: public

text: Jan 13, 2016

text: Croatia, , Zagreb

text: environmental

text: Yes

characteristic: host associated

text: digested

text: Acinetobacter baumannii

text: Acinetobacter baumannii


characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF COLOGNE

text: public

text: Oct 14, 2015

text: Croatia, , Zagreb

text: environmental

text: Yes

text: digested

text: Acinetobacter baumannii

text: Acinetobacter baumannii


status: KILLED

text: Public Health Agency of Sweden

text: killed

characteristic: SRA accession

text: sam_FOHMtest_3f7ac6be-808d-4d77-b06b-0ba7a666a065

tag: Namespace:Public Health Agency of Sweden

text: FOHM

text: Sweden

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: host scientific name

text: yes

characteristic: isolate

text: Salmonella enterica

text: Salmonella enterica

text: Salmonella enterica


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UWO

text: public

characteristic: Submitter Id

text: human

characteristic: common name

text: gut and saliva samples from extremes of atherosclerosis study

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

text: stool

characteristic: environment (material)

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: stool

characteristic: host body product

text: site

characteristic: host body site

characteristic: host subject id

text: human-associated

characteristic: human associated environmental package

text: metagenome

characteristic: investigation type

text: ccaaggtt

characteristic: left barcode

text: Homo sapiens

characteristic: organism

text: regression

characteristic: plaque phenotype

text: The intestinal microbiome and extremes of atherosclerosis

characteristic: project name

characteristic: residual value

text: ggttccaa

characteristic: right barcode

characteristic: sample id

text: Homo sapiens

text: Illumina MiSeq

characteristic: sequencing method

text: Extremes of atherosclerosis


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UWO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: human

characteristic: common name

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

text: stool

text: Canada

characteristic: geographic location (country and/or sea)

text: stool

text: Feces

text: human-associated

text: metagenome

text: ccaaggtt

text: Homo sapiens

text: regression

text: ttccaagg

text: Homo sapiens

text: Illumina MiSeq

text: Extremes of atherosclerosis

characteristic: title


characteristic: ENA-CHECKLIST

text: UWO

text: public

text: human

text: stool

characteristic: environment (material)

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: stool

characteristic: host body product

text: Feces

characteristic: host body site

characteristic: host subject id

text: human-associated

characteristic: human associated environmental package

text: metagenome

characteristic: investigation type

text: ccaaggtt

characteristic: left barcode

text: Homo sapiens

characteristic: organism

text: regression

characteristic: plaque phenotype

characteristic: project name

characteristic: residual value

text: ccttggaa

characteristic: right barcode

characteristic: sample id

text: Homo sapiens

text: Illumina MiSeq

characteristic: sequencing method

text: Extremes of atherosclerosis


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UWO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: human

characteristic: common name

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

text: stool

text: Canada

characteristic: geographic location (country and/or sea)

text: stool

text: Portion of saliva

text: human-associated

text: metagenome

text: ccaaggtt

text: Homo sapiens

text: regression

text: ttggaacc

text: Homo sapiens

text: Illumina MiSeq

text: Extremes of atherosclerosis

characteristic: title


characteristic: ENA-CHECKLIST

text: UWO

text: public

text: human

text: stool

characteristic: environment (material)

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: stool

characteristic: host body product

text: Feces

characteristic: host body site

characteristic: host subject id

text: human-associated

characteristic: human associated environmental package

text: metagenome

characteristic: investigation type

text: ccaaggtt

characteristic: left barcode

text: Homo sapiens

characteristic: organism

text: regression

characteristic: plaque phenotype

characteristic: project name

characteristic: residual value

text: ggaacctt

characteristic: right barcode

characteristic: sample id

text: Homo sapiens

text: Illumina MiSeq

characteristic: sequencing method

text: Extremes of atherosclerosis


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UWO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: human

characteristic: common name

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

text: stool

text: Canada

characteristic: geographic location (country and/or sea)

text: stool

text: Feces

text: human-associated

text: metagenome

text: ccaaggtt

text: Homo sapiens

text: regression

text: aaccttgg

text: Homo sapiens

text: Illumina MiSeq

text: Extremes of atherosclerosis

characteristic: title


characteristic: ENA-CHECKLIST

text: UWO

text: public

text: human

text: stool

characteristic: environment (material)

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: stool

characteristic: host body product

text: Portion of saliva

characteristic: host body site

characteristic: host subject id

text: human-associated

characteristic: human associated environmental package

text: metagenome

characteristic: investigation type

text: ccaaggtt

characteristic: left barcode

text: Homo sapiens

characteristic: organism

text: regression

characteristic: plaque phenotype

characteristic: project name

characteristic: residual value

text: tccgttcg

characteristic: right barcode

characteristic: sample id

text: Homo sapiens

text: Illumina MiSeq

characteristic: sequencing method

text: Extremes of atherosclerosis


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UWO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: human

characteristic: common name

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

text: stool

text: Canada

characteristic: geographic location (country and/or sea)

text: stool

text: Feces

text: human-associated

text: metagenome

text: ccaaggtt

text: Homo sapiens

text: regression

text: gaatccat

text: Homo sapiens

text: Illumina MiSeq

text: Extremes of atherosclerosis

characteristic: title


characteristic: ENA-CHECKLIST

text: UWO

text: public

text: human

text: stool

characteristic: environment (material)

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: stool

characteristic: host body product

text: Feces

characteristic: host body site

characteristic: host subject id

text: human-associated

characteristic: human associated environmental package

text: metagenome

characteristic: investigation type

text: ccaaggtt

characteristic: left barcode

text: Homo sapiens

characteristic: organism

text: regression

characteristic: plaque phenotype

characteristic: project name

characteristic: residual value

text: cttaggtc

characteristic: right barcode

characteristic: sample id

text: Homo sapiens

text: Illumina MiSeq

characteristic: sequencing method

text: Extremes of atherosclerosis


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UWO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: human

characteristic: common name

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

text: stool

text: Canada

characteristic: geographic location (country and/or sea)

text: stool

text: Portion of saliva

text: human-associated

text: metagenome

text: ccaaggtt

text: Homo sapiens

text: progression

text: aggcaaga

text: Homo sapiens

text: Illumina MiSeq

text: Extremes of atherosclerosis

characteristic: title


characteristic: ENA-CHECKLIST

text: UWO

text: public

text: human

text: stool

characteristic: environment (material)

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: stool

characteristic: host body product

text: Feces

characteristic: host body site

characteristic: host subject id

text: human-associated

characteristic: human associated environmental package

text: metagenome

characteristic: investigation type

text: ccaaggtt

characteristic: left barcode

text: Homo sapiens

characteristic: organism

text: progression

characteristic: plaque phenotype

characteristic: project name

characteristic: residual value

text: tggcttcg

characteristic: right barcode

characteristic: sample id

text: Homo sapiens

text: Illumina MiSeq

characteristic: sequencing method

text: Extremes of atherosclerosis


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UWO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: human

characteristic: common name

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

text: stool

text: Canada

characteristic: geographic location (country and/or sea)

text: stool

text: Feces

text: human-associated

text: metagenome

text: ccaaggtt

text: Homo sapiens

text: progression

text: caatggat

text: Homo sapiens

text: Illumina MiSeq

text: Extremes of atherosclerosis

characteristic: title


characteristic: ENA-CHECKLIST

text: UWO

text: public

text: human

text: saliva

characteristic: environment (material)

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: saliva

characteristic: host body product

text: Feces

characteristic: host body site

characteristic: host subject id

text: human-associated

characteristic: human associated environmental package

text: metagenome

characteristic: investigation type

text: tccgttcg

characteristic: left barcode

text: Homo sapiens

characteristic: organism

text: progression

characteristic: plaque phenotype

characteristic: project name

characteristic: residual value

text: aggcaaga

characteristic: right barcode

characteristic: sample id

text: Homo sapiens

text: Illumina MiSeq

characteristic: sequencing method

text: Extremes of atherosclerosis


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UWO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: human

characteristic: common name

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

text: saliva

text: Canada

characteristic: geographic location (country and/or sea)

text: saliva

text: Portion of saliva

text: human-associated

text: metagenome

text: tccgttcg

text: Homo sapiens

text: progression

text: tggcttcg

text: Homo sapiens

text: Illumina MiSeq

text: Extremes of atherosclerosis

characteristic: title


characteristic: ENA-CHECKLIST

text: UWO

text: public

text: human

text: saliva

characteristic: environment (material)

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: saliva

characteristic: host body product

text: Portion of saliva

characteristic: host body site

characteristic: host subject id

text: human-associated

characteristic: human associated environmental package

text: metagenome

characteristic: investigation type

text: tccgttcg

characteristic: left barcode

text: Homo sapiens

characteristic: organism

text: progression

characteristic: plaque phenotype

characteristic: project name

characteristic: residual value

text: caatggat

characteristic: right barcode

characteristic: sample id

text: Homo sapiens

text: Illumina MiSeq

characteristic: sequencing method

text: Extremes of atherosclerosis


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UWO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: human

characteristic: common name

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

text: stool

text: Canada

characteristic: geographic location (country and/or sea)

text: stool

text: Portion of saliva

text: human-associated

text: metagenome

text: ccaaggtt

text: Homo sapiens

text: progression

text: gttacctg

text: Homo sapiens

text: Illumina MiSeq

text: Extremes of atherosclerosis

characteristic: title


characteristic: ENA-CHECKLIST

text: UWO

text: public

text: human

text: stool

characteristic: environment (material)

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: stool

characteristic: host body product

text: Feces

characteristic: host body site

characteristic: host subject id

text: human-associated

characteristic: human associated environmental package

text: metagenome

characteristic: investigation type

text: ccaaggtt

characteristic: left barcode

text: Homo sapiens

characteristic: organism

text: progression

characteristic: plaque phenotype

characteristic: project name

characteristic: residual value

text: accgaaca

characteristic: right barcode

characteristic: sample id

text: Homo sapiens

text: Illumina MiSeq

characteristic: sequencing method

text: Extremes of atherosclerosis


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UWO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: human

characteristic: common name

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

text: stool

text: Canada

characteristic: geographic location (country and/or sea)

text: stool

text: Feces

text: human-associated

text: metagenome

text: aaggttcc

text: Homo sapiens

text: progression

text: ccaaggtt

text: Homo sapiens

text: Illumina MiSeq

text: Extremes of atherosclerosis

characteristic: title


characteristic: ENA-CHECKLIST

text: UWO

text: public

text: human

text: saliva

characteristic: environment (material)

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: saliva

characteristic: host body product

text: Feces

characteristic: host body site

characteristic: host subject id

text: human-associated

characteristic: human associated environmental package

text: metagenome

characteristic: investigation type

text: tccgttcg

characteristic: left barcode

text: Homo sapiens

characteristic: organism

text: progression

characteristic: plaque phenotype

characteristic: project name

characteristic: residual value

text: gttacctg

characteristic: right barcode

characteristic: sample id

text: Homo sapiens

text: Illumina MiSeq

characteristic: sequencing method

text: Extremes of atherosclerosis


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UWO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: human

characteristic: common name

characteristic: description

characteristic: environment (biome)

characteristic: environment (feature)

text: saliva

text: Canada

characteristic: geographic location (country and/or sea)

text: saliva

text: Portion of saliva

text: human-associated

text: metagenome

text: tccgttcg

text: Homo sapiens

text: progression

text: accgaaca

text: Homo sapiens

text: Illumina MiSeq

text: Extremes of atherosclerosis

characteristic: title


characteristic: ENA-CHECKLIST

text: UWO

text: public

text: human

text: saliva

characteristic: environment (material)

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: saliva

characteristic: host body product

text: Portion of saliva

characteristic: host body site

characteristic: host subject id

text: human-associated

characteristic: human associated environmental package

text: metagenome

characteristic: investigation type

text: gaatccat

characteristic: left barcode

text: Homo sapiens

characteristic: organism

text: progression

characteristic: plaque phenotype

characteristic: project name

characteristic: residual value

text: ccaaggtt

characteristic: right barcode

characteristic: sample id

text: Homo sapiens

text: Illumina MiSeq

characteristic: sequencing method

text: Extremes of atherosclerosis


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

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