text: UC DAVIS GENOME CENTER

text: public

tag: Namespace:UC DAVIS GENOME CENTER

characteristic: Submitter Id

characteristic: collection date

text: USDAdinner

characteristic: description

text: prepared meals

characteristic: environment (biome)

text: food

characteristic: environment (feature)

text: food

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: miscellaneous natural or artificial environment

characteristic: miscellaneous environmental package

text: food metagenome

text: Microbes We Eat

characteristic: project name

text: food metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: 16S rRNA amplicons from bacteria associated with prepared food

characteristic: title

type: has member


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UC DAVIS GENOME CENTER

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: AMERICANdinner

text: prepared meals

text: food

text: food

text: USA

text: mimarks-survey

text: food metagenome

characteristic: organism

text: Microbes We Eat

text: food metagenome

text: Illumina MiSeq


text: UC DAVIS GENOME CENTER

text: public

characteristic: Submitter Id

characteristic: collection date

text: VEGANdinner

characteristic: description

text: prepared meals

characteristic: environment (biome)

text: food

characteristic: environment (feature)

text: food

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: mimarks-survey

text: food metagenome

text: Microbes We Eat

text: food metagenome

text: Illumina MiSeq


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UC DAVIS GENOME CENTER

text: public

text: USDAbreakfast

text: prepared meals

text: food

text: food

text: USA

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

characteristic: miscellaneous environmental package

text: food metagenome

text: Microbes We Eat

characteristic: project name

text: food metagenome

text: Illumina MiSeq

characteristic: sequencing method

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UC DAVIS GENOME CENTER

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: AMERICANbreakfast

text: prepared meals

text: food

text: food

text: USA

text: mimarks-survey

text: food metagenome

characteristic: organism

text: Microbes We Eat

text: food metagenome

text: Illumina MiSeq


text: UC DAVIS GENOME CENTER

text: public

characteristic: Submitter Id

characteristic: collection date

text: VEGANbreakfast

characteristic: description

text: prepared meals

characteristic: environment (biome)

text: food

characteristic: environment (feature)

text: food

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: mimarks-survey

text: food metagenome

text: Microbes We Eat

text: food metagenome

text: Illumina MiSeq


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UC DAVIS GENOME CENTER

text: public

text: USDAlunch

text: prepared meals

text: food

text: food

text: USA

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

characteristic: miscellaneous environmental package

text: food metagenome

text: Microbes We Eat

characteristic: project name

text: food metagenome

text: Illumina MiSeq

characteristic: sequencing method

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UC DAVIS GENOME CENTER

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: AMERICANlunch

text: prepared meals

text: food

text: food

text: USA

text: mimarks-survey

text: food metagenome

characteristic: organism

text: Microbes We Eat

text: food metagenome

text: Illumina MiSeq


text: UC DAVIS GENOME CENTER

text: public

characteristic: Submitter Id

characteristic: collection date

text: VEGANlunch

characteristic: description

text: prepared meals

characteristic: environment (biome)

text: food

characteristic: environment (feature)

text: food

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: mimarks-survey

text: food metagenome

text: Microbes We Eat

text: food metagenome

text: Illumina MiSeq


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UC DAVIS GENOME CENTER

text: public

text: AMERICANsnack

text: prepared meals

text: food

text: food

text: USA

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

characteristic: miscellaneous environmental package

text: food metagenome

text: Microbes We Eat

characteristic: project name

text: food metagenome

text: Illumina MiSeq

characteristic: sequencing method

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UC DAVIS GENOME CENTER

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: prepared meals

text: food

text: food

text: USA

text: mimarks-survey

text: food metagenome

characteristic: organism

text: Microbes We Eat

text: food metagenome

text: Illumina MiSeq


text: Bifidobacterium breve

characteristic: ArrayExpress-Species

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

characteristic: Submitter Id

text: Bifidobacterium breve

text: Bifidobacterium breve

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: CENTRE FOR GENOMIC RESEARCH (CGR)

text: public

tag: Namespace:CENTRE FOR GENOMIC RESEARCH (CGR)

characteristic: description

text: Campylobacter

text: Campylobacter

text: Campylobacter isolate sequences


text: unidentified

text: SC

text: public

text: unidentified

text: 16s rRNA gene amplicons

characteristic: sample description

text: unidentified


text: CENTRE FOR GENOMIC RESEARCH (CGR)

text: public

text: Campylobacter

text: Campylobacter

text: Camplyobacter Isolate

characteristic: title


text: 33347430; 34414415; 34461978; 35780211

characteristic: ENA-LAST-UPDATE

text: CTB/NICD

text: public

text: ZAF

text: NDM Oxford

characteristic: broker name

text: Mycobacterium

characteristic: genus

characteristic: isolate

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: SABF01298771_S19. CTB/NICD. BF01298771_S19

type: AMR curated data - CABBAGE

value: pyrazinamide

value: susceptible

value: Mycobacterium tuberculosis

value: rifampin

value: resistant

value: isoniazid

value: ethambutol


text: 33347430; 34414415; 34461978; 35780211

characteristic: External Id

text: CTB/NICD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ZAF

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: SAEB00198368_S29. CTB/NICD. EB00198368_S29


text: 34414415; 34461978; 35780211

text: CTB/NICD

text: public

characteristic: INSDC status

text: ZAF

characteristic: SRA accession

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

characteristic: organism

text: Mycobacterium tuberculosis

text: SATRL0085876_S27. CTB/NICD. TRL0085876_S27


text: 34414415; 34461978; 35780211

text: CTB/NICD

text: public

text: ZAF

characteristic: Submitter Id

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: SATRL0111034_S3. CTB/NICD. TRL0111034_S3


text: 34414415; 34461978; 35780211

characteristic: ENA-CHECKLIST

text: CTB/NICD

text: public

text: ZAF

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: SACG01490116_S15. CTB/NICD. CG01490116_S15


text: 34414415; 34461978; 35780211

characteristic: ENA-FIRST-PUBLIC

text: CTB/NICD

text: public

text: ZAF

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: SAED00926802_S31. CTB/NICD. ED00926802_S31


text: 34414415; 34461978; 35780211

text: CTB/NICD

text: public

text: ZAF

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: SAEF00226974_S29. CTB/NICD. EF00226974_S29


text: 34414415; 34461978; 35780211

text: CTB/NICD

text: public

text: ZAF

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: SAEF00237922_S30. CTB/NICD. EF00237922_S30


text: 34414415; 34461978; 35780211

text: CTB/NICD

text: public

text: ZAF

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: SADH00593017_S30. CTB/NICD. DH00593017_S30


text: 33347430; 34414415; 34461978; 35780211

text: CTB/NICD

text: public

text: ZAF

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: SATRL0090962_S8. CTB/NICD. TRL0090962_S8


text: 34414415; 34461978; 35780211

text: CTB/NICD

text: public

text: ZAF

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: SABK00092314_S2. CTB/NICD. BK00092314_S2

value: streptomycin

value: kanamycin

value: ofloxacin


text: 33347430; 34414415; 34461978; 35780211

text: CTB/NICD

text: public

text: ZAF

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: SABF01338209_S28. CTB/NICD. BF01338209_S28


text: 34414415; 34461978; 35780211

text: CTB/NICD

text: public

text: ZAF

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: SABR00085359_S19. CTB/NICD. BR00085359_S19


text: 34414415; 34461978; 35780211

text: CTB/NICD

text: public

text: ZAF

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: SAEI00670575_S16. CTB/NICD. EI00670575_S16


text: 34414415; 34461978; 35780211

text: CTB/NICD

text: public

text: ZAF

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: SABE01141175_S8. CTB/NICD. BE01141175_S8


text: 34414415; 34461978; 35780211

text: CTB/NICD

text: public

text: ZAF

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: SACD00810261_S27. CTB/NICD. CD00810261_S27


text: Mycobacterium ulcerans

characteristic: ArrayExpress-Species

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: Mycobacterium ulcerans

text: Mycobacterium ulcerans

characteristic: strain


text: Mycobacterium africanum

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: Mycobacterium africanum

text: Mycobacterium africanum


text: Shigella dysenteriae

text: CDC ZB4

text: SC

text: public

text: Shigella dysenteriae

text: Shigella dysenteriae

text: CDC ZB4


text: Shigella dysenteriae

text: CDC 69-3818

text: SC

text: public

text: Shigella dysenteriae

text: Shigella dysenteriae

text: CDC 69-3818


text: Shigella dysenteriae

text: SC

text: public

text: Shigella dysenteriae

text: Shigella dysenteriae


text: Shigella dysenteriae

text: CDC 87-8330

text: SC

text: public

text: Shigella dysenteriae

text: Shigella dysenteriae

text: CDC 87-8330


characteristic: ENA last update

text: SC

text: public

characteristic: anonymized name

characteristic: collection date

text: United Kingdom

characteristic: country

text: not known

characteristic: host status

text: Faeces

characteristic: isolation source

text: Escherichia coli

text: Escherichia coli

text: human

characteristic: specific host

characteristic: title


characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: United Kingdom

text: not known

text: Urine

text: Escherichia coli

text: Escherichia coli

text: human


text: Escherichia coli

characteristic: ArrayExpress-Species

characteristic: ArrayExpress-StrainOrLine

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

characteristic: Submitter Id

text: Escherichia coli

characteristic: organism

text: Escherichia coli


characteristic: ENA-LAST-UPDATE

text: CUSB-HM

text: public

characteristic: collection date

text: human gut metagenome

characteristic: common name

text: Ten IBD and 10 healthy individual's fecal microbiomes were determined by NGS sequencing, to indentify features that are unique to each group. This was done using shot-gun metagenomics of DNA extracted from fecal samples and run on a HiSeq 2500.

characteristic: description

text: colon

characteristic: environment (biome)

text: fecal

characteristic: environment (feature)

text: stool

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

characteristic: project name

text: human gut metagenome

text: Illumina HiSeq 2500

characteristic: sequencing method

text: Analysis of the IBD microbiome.


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: MWI

characteristic: SRA accession

characteristic: anonymized name

text: Streptococcus pneumoniae

text: Malawi

characteristic: country

text: Streptococcus

characteristic: genus

text: Homo sapiens

characteristic: host

text: meningitis

characteristic: host status

text: female

characteristic: isolate

text: CSF

characteristic: isolation source

text: central nervous system

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

characteristic: serovar

text: Human

characteristic: specific host

characteristic: strain

characteristic: sub strain

characteristic: title

value: trimethoprim-sulfamethoxazole

value: BSAC

value: disk diffusion

value: Streptococcus pneumoniae

value: tetracycline

value: penicillin

value: chloramphenicol

value: erythromycin


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: MWI

characteristic: Submitter Id

characteristic: collection date

text: Streptococcus pneumoniae

characteristic: common name

text: Malawi

text: Streptococcus

text: Homo sapiens

text: meningitis

text: male

text: CSF

text: central nervous system

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

text: Human

value: susceptible


text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: MWI

characteristic: SRA accession

characteristic: anonymized name

text: Streptococcus pneumoniae

text: Malawi

characteristic: country

text: Streptococcus

characteristic: genus

text: Homo sapiens

characteristic: host

text: bacteraemia

characteristic: host status

text: male

text: blood

text: blood

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: MWI

text: Streptococcus pneumoniae

text: Malawi

text: Streptococcus

text: Homo sapiens

text: bacteraemia

text: female

characteristic: isolate

text: blood

characteristic: isolation source

text: blood

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

characteristic: serovar

text: Human

characteristic: specific host

characteristic: strain

characteristic: sub strain

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: MWI

characteristic: Submitter Id

characteristic: collection date

text: Streptococcus pneumoniae

characteristic: common name

text: Malawi

text: Streptococcus

text: Homo sapiens

text: meningitis

text: CSF

text: central nervous system

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

text: Human


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: anonymized name

text: Streptococcus pneumoniae

text: Malawi

characteristic: country

text: carriage

characteristic: host status

text: NP swab

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human


text: SC

text: public

text: MWI

text: Streptococcus pneumoniae

text: Malawi

text: Streptococcus

characteristic: genus

text: Homo sapiens

characteristic: host

text: meningitis

text: male

characteristic: isolate

text: CSF

characteristic: isolation source

text: central nervous system

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

characteristic: serovar

text: Human

characteristic: specific host

characteristic: strain

characteristic: sub strain

characteristic: title


text: Streptococcus pneumoniae

characteristic: ArrayExpress-Species

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

characteristic: INSDC status

text: MWI

characteristic: SRA accession

characteristic: anonymized name

characteristic: collection date

text: Streptococcus pneumoniae

characteristic: common name

text: Malawi

characteristic: country

text: Streptococcus

characteristic: genus

text: Homo sapiens

text: bacteraemia

characteristic: host status

text: blood

text: blood

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human


characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: MWI

text: Streptococcus pneumoniae

text: Malawi

text: Streptococcus

text: Homo sapiens

characteristic: host

text: bacteraemia

text: male

characteristic: isolate

text: blood

characteristic: isolation source

text: blood

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

characteristic: serovar

text: Human

characteristic: specific host

characteristic: strain

characteristic: sub strain

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: MWI

characteristic: Submitter Id

text: Streptococcus pneumoniae

text: Malawi

text: Streptococcus

text: Homo sapiens

text: bacteraemia

text: blood

text: blood

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

text: Human


characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: MWI

characteristic: SRA accession

characteristic: anonymized name

characteristic: collection date

text: Streptococcus pneumoniae

characteristic: common name

text: Malawi

characteristic: country

text: Streptococcus

characteristic: genus

text: Homo sapiens

characteristic: host

text: bacteraemia

characteristic: host status

text: blood

text: blood

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: MWI

text: Streptococcus pneumoniae

text: Malawi

text: Streptococcus

text: Homo sapiens

text: meningitis

text: male

characteristic: isolate

text: CSF

characteristic: isolation source

text: central nervous system

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

characteristic: serovar

text: Human

characteristic: specific host

characteristic: strain

characteristic: sub strain

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: MWI

characteristic: SRA accession

characteristic: Submitter Id

text: Streptococcus pneumoniae

text: Malawi

text: Streptococcus

text: Homo sapiens

text: meningitis

text: female

text: CSF

text: central nervous system

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

text: Human


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: MWI

characteristic: anonymized name

characteristic: collection date

text: Streptococcus pneumoniae

characteristic: common name

text: Malawi

characteristic: country

text: Streptococcus

characteristic: genus

text: Homo sapiens

characteristic: host

text: meningitis

characteristic: host status

text: CSF

text: central nervous system

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: MWI

text: Streptococcus pneumoniae

text: Malawi

text: Streptococcus

text: Homo sapiens

text: meningitis

text: female

characteristic: isolate

text: CSF

characteristic: isolation source

text: central nervous system

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

characteristic: serovar

text: Human

characteristic: specific host

characteristic: strain

characteristic: sub strain

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: MWI

characteristic: SRA accession

characteristic: Submitter Id

text: Streptococcus pneumoniae

text: Malawi

text: Streptococcus

text: Homo sapiens

text: bacteraemia

text: blood

text: blood

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

text: Human


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: MWI

characteristic: anonymized name

characteristic: collection date

text: Streptococcus pneumoniae

characteristic: common name

text: Malawi

characteristic: country

text: Streptococcus

characteristic: genus

text: Homo sapiens

characteristic: host

text: bacteraemia

characteristic: host status

text: female

text: blood

text: blood

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: Streptococcus pneumoniae

text: Malawi

text: carriage

text: NP swab

characteristic: isolation source

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: NT

characteristic: serovar

text: Human

characteristic: specific host

characteristic: strain

characteristic: sub strain

characteristic: title


characteristic: ENA-LAST-UPDATE

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: MWI

characteristic: SRA accession

characteristic: Submitter Id

text: Streptococcus pneumoniae

text: Malawi

text: Streptococcus

text: Homo sapiens

text: bacteraemia

text: female

characteristic: isolate

text: blood

text: blood

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

text: Human


characteristic: ENA-CHECKLIST

characteristic: External Id

text: SC

text: public

text: MWI

characteristic: anonymized name

characteristic: collection date

text: Streptococcus pneumoniae

characteristic: common name

text: Malawi

characteristic: country

text: Streptococcus

characteristic: genus

text: Homo sapiens

characteristic: host

text: meningitis

characteristic: host status

text: female

text: CSF

text: central nervous system

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human

value: intermediate


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

characteristic: INSDC center name

text: public

text: MWI

text: Streptococcus pneumoniae

text: Malawi

text: Streptococcus

text: Homo sapiens

text: meningitis

text: male

text: CSF

characteristic: isolation source

text: central nervous system

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

characteristic: serovar

text: Human

characteristic: specific host

characteristic: strain

characteristic: sub strain

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: MWI

characteristic: SRA accession

characteristic: Submitter Id

text: Streptococcus pneumoniae

text: Malawi

text: Streptococcus

text: Homo sapiens

text: meningitis

text: female

characteristic: isolate

text: CSF

text: central nervous system

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

text: Human


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: MWI

characteristic: anonymized name

characteristic: collection date

text: Streptococcus pneumoniae

characteristic: common name

text: Malawi

characteristic: country

text: Streptococcus

characteristic: genus

text: Homo sapiens

characteristic: host

text: bacteraemia

characteristic: host status

text: female

text: blood

text: blood

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human


characteristic: ENA-CHECKLIST

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: MWI

text: Streptococcus pneumoniae

text: Malawi

text: Streptococcus

text: Homo sapiens

text: meningitis

text: male

text: CSF

characteristic: isolation source

text: central nervous system

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

characteristic: serovar

text: Human

characteristic: specific host

characteristic: strain

characteristic: sub strain

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: MWI

characteristic: SRA accession

characteristic: Submitter Id

text: Streptococcus pneumoniae

text: Malawi

text: Streptococcus

text: Homo sapiens

text: meningitis

text: male

characteristic: isolate

text: CSF

text: central nervous system

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

text: Human


characteristic: ENA-CHECKLIST

characteristic: External Id

text: SC

text: public

text: MWI

characteristic: anonymized name

characteristic: collection date

text: Streptococcus pneumoniae

characteristic: common name

text: Malawi

characteristic: country

text: Streptococcus

characteristic: genus

text: Homo sapiens

characteristic: host

text: bacteraemia

characteristic: host status

text: male

text: blood

text: blood

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

characteristic: INSDC center name

text: public

text: MWI

text: Streptococcus pneumoniae

text: Malawi

text: Streptococcus

text: Homo sapiens

text: meningitis

text: female

text: CSF

characteristic: isolation source

text: central nervous system

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

characteristic: serovar

text: Human

characteristic: specific host

characteristic: strain

characteristic: sub strain

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Streptococcus pneumoniae

text: Malawi

text: carriage / pneumonia

text: NP swab

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

text: Human


characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

characteristic: anonymized name

characteristic: collection date

text: Streptococcus pneumoniae

characteristic: common name

text: Malawi

characteristic: country

text: carriage / pneumonia

characteristic: host status

text: NP swab

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: NT

text: Human


text: Streptococcus pneumoniae

characteristic: ArrayExpress-Species

characteristic: ENA-LAST-UPDATE

text: SC

characteristic: INSDC center name

text: public

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae


characteristic: ENA-CHECKLIST

text: SC

text: public

text: Streptococcus pneumoniae

text: Malawi

text: carriage

text: NP swab

characteristic: isolation source

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

characteristic: serovar

text: Human

characteristic: specific host

characteristic: strain

characteristic: sub strain

characteristic: title


characteristic: External Id

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: MWI

characteristic: SRA accession

characteristic: Submitter Id

text: Streptococcus pneumoniae

text: Malawi

text: Streptococcus

characteristic: genus

text: Homo sapiens

characteristic: host

text: meningitis

text: male

characteristic: isolate

text: CSF

text: central nervous system

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

text: Human


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

characteristic: INSDC center name

text: public

text: MWI

characteristic: anonymized name

characteristic: collection date

text: Streptococcus pneumoniae

characteristic: common name

text: Malawi

characteristic: country

text: Streptococcus

text: Homo sapiens

text: bacteraemia

characteristic: host status

text: male

text: blood

text: blood

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human


characteristic: External Id

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: MWI

text: Streptococcus pneumoniae

text: Malawi

text: Streptococcus

text: Homo sapiens

text: bacteraemia

text: female

text: blood

characteristic: isolation source

text: blood

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

characteristic: serovar

text: Human

characteristic: specific host

characteristic: strain

characteristic: sub strain

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Streptococcus pneumoniae

text: Malawi

text: bacteraemia

text: blood

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

text: Human


characteristic: ENA-LAST-UPDATE

text: SC

characteristic: INSDC center name

text: public

characteristic: anonymized name

characteristic: collection date

text: Streptococcus pneumoniae

characteristic: common name

text: Malawi

characteristic: country

text: meningitis

text: CSF

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human


characteristic: External Id

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: MWI

text: Streptococcus pneumoniae

text: Malawi

text: Streptococcus

characteristic: genus

text: Homo sapiens

characteristic: host

text: bacteraemia

characteristic: host status

text: female

characteristic: isolate

text: blood

characteristic: isolation source

text: blood

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

characteristic: serovar

text: Human


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

characteristic: INSDC status

text: MWI

characteristic: SRA accession

characteristic: Submitter Id

text: Streptococcus pneumoniae

text: Malawi

text: Streptococcus

text: Homo sapiens

text: bacteraemia

text: female

text: blood

text: blood

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human

characteristic: specific host

characteristic: strain

characteristic: sub strain

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: MWI

characteristic: anonymized name

characteristic: collection date

text: Streptococcus pneumoniae

characteristic: common name

text: Malawi

characteristic: country

text: Streptococcus

text: Homo sapiens

text: bacteraemia

text: female

text: blood

text: blood

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

text: Human


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC last update

text: public

text: MWI

text: Streptococcus pneumoniae

text: Malawi

text: Streptococcus

characteristic: genus

text: Homo sapiens

characteristic: host

text: meningitis

characteristic: host status

text: female

characteristic: isolate

text: CSF

characteristic: isolation source

text: central nervous system

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

characteristic: serovar

text: Human


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

characteristic: INSDC status

text: MWI

characteristic: SRA accession

characteristic: Submitter Id

text: Streptococcus pneumoniae

text: Malawi

text: Streptococcus

text: Homo sapiens

text: Meningitis

text: male

text: Cerebrospinal Fluid

text: central nervous system

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human

characteristic: specific host

characteristic: strain

characteristic: sub strain

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: anonymized name

characteristic: collection date

text: Streptococcus pneumoniae

characteristic: common name

text: Malawi

characteristic: country

text: pneumonia

text: Pleural fluid

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

text: Human


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC last update

text: public

text: MWI

text: Streptococcus pneumoniae

text: Malawi

text: Streptococcus

characteristic: genus

text: Homo sapiens

characteristic: host

text: Disease

characteristic: host status

text: male

characteristic: isolate

text: blood

text: blood

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

characteristic: serovar

text: Human


characteristic: ENA-CHECKLIST

text: SC

text: public

characteristic: INSDC status

text: MWI

characteristic: SRA accession

characteristic: Submitter Id

text: Streptococcus pneumoniae

text: Malawi

text: Streptococcus

text: Homo sapiens

text: bacteraemia

text: male

text: blood

characteristic: isolation source

text: blood

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human

characteristic: specific host

characteristic: strain

characteristic: sub strain

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: MWI

characteristic: anonymized name

characteristic: collection date

text: Streptococcus pneumoniae

characteristic: common name

text: Malawi

characteristic: country

text: Streptococcus

text: Homo sapiens

text: bacteraemia

text: female

text: blood

text: blood

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

text: Human


characteristic: ENA-CHECKLIST

characteristic: External Id

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: MWI

text: Streptococcus pneumoniae

text: Malawi

text: Streptococcus

characteristic: genus

text: Homo sapiens

characteristic: host

text: bacteraemia

characteristic: host status

text: female

characteristic: isolate

text: blood

text: blood

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

characteristic: serovar

text: Human


text: Streptococcus pneumoniae

characteristic: ArrayExpress-Species

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae


text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: MWI

characteristic: anonymized name

characteristic: collection date

text: Streptococcus pneumoniae

characteristic: common name

text: Malawi

text: Streptococcus

text: Homo sapiens

text: bacteraemia

text: male

text: blood

characteristic: isolation source

text: blood

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human

characteristic: specific host

characteristic: strain

characteristic: sub strain

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Streptococcus pneumoniae

text: Malawi

characteristic: country

text: carriage

characteristic: host status

text: NP swab

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

text: Human


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Streptococcus pneumoniae

text: Malawi

text: carriage

text: NP swab

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: NT

characteristic: serovar

text: Human


text: SC

characteristic: INSDC first public

text: public

text: MWI

characteristic: anonymized name

characteristic: collection date

text: Streptococcus pneumoniae

characteristic: common name

text: Malawi

text: Streptococcus

characteristic: genus

text: Homo sapiens

characteristic: host

text: meningitis

text: male

characteristic: isolate

text: CSF

characteristic: isolation source

text: central nervous system

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human

characteristic: specific host


characteristic: ENA-CHECKLIST

characteristic: External Id

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: MWI

text: Streptococcus pneumoniae

text: Malawi

characteristic: country

text: Streptococcus

text: Homo sapiens

text: bacteraemia

characteristic: host status

text: female

text: blood

text: blood

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human

characteristic: strain

characteristic: sub strain

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: MWI

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Streptococcus pneumoniae

text: Malawi

text: Streptococcus

text: Homo sapiens

text: meningitis

text: female

text: CSF

text: central nervous system

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

characteristic: serovar

text: Human


characteristic: ENA-CHECKLIST

characteristic: External Id

text: SC

text: public

text: MWI

characteristic: collection date

text: Streptococcus pneumoniae

characteristic: common name

text: Malawi

text: Streptococcus

characteristic: genus

text: Homo sapiens

characteristic: host

text: meningitis

text: male

characteristic: isolate

text: CSF

characteristic: isolation source

text: central nervous system

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human

characteristic: specific host


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Streptococcus pneumoniae

text: Malawi

characteristic: country

text: IPD

characteristic: host status

text: blood

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human

characteristic: strain

characteristic: sub strain

characteristic: title


text: Salmonella enterica subsp. enterica serovar Weltevreden

characteristic: ArrayExpress-Species

characteristic: ENA-CHECKLIST

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: organism


characteristic: ArrayExpress-DevelopmentalStage

text: C57BL/6N / C57BL/6N

characteristic: ArrayExpress-Genotype

text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: female

characteristic: ArrayExpress-Sex

text: Mus musculus

characteristic: ArrayExpress-StrainOrLine

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: house mouse

characteristic: common name

text: Mus musculus

text: Total RNA from a single wildtype female E9.5 25 somite mouse embryo with Bap1 / C57BL/6N parents. This study forms part of the Deciphering the Mechanisms of Developmental Disorders (DMDD) project. Using the yolk sac the embryo gender was inconclusive, analysis of Xist and Y chromosome genes in the sequence data suggests female and the gender has been altered accordingly.

characteristic: sample description

text: Mus musculus


text: Bap1 / C57BL/6N

text: Whole embryo

text: male

text: Mus musculus

characteristic: ENA-LAST-UPDATE

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: house mouse

text: Mus musculus

text: Total RNA from a single heterozygous male E9.5 19 somite mouse embryo for allele Bap1tm1a(EUCOMM)hmgu, with heterozygous Bap1 / C57BL/6N parents. This study forms part of the Deciphering the Mechanisms of Developmental Disorders (DMDD) project. Using the yolk sac the embryo gender was inconclusive, however, analysis of Xist and Y chromosome genes in the sequence data suggests male and the gender has been altered accordingly.

text: Mus musculus

characteristic: strain

characteristic: title


text: C57BL/6N / C57BL/6N

text: Whole embryo

text: female

text: Mus musculus

characteristic: ArrayExpress-Species

characteristic: ENA-CHECKLIST

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: house mouse

text: Mus musculus

text: Total RNA from a single wildtype female E9.5 21 somite mouse embryo with Bap1 / C57BL/6N parents. This study forms part of the Deciphering the Mechanisms of Developmental Disorders (DMDD) project. Using the yolk sac the embryo gender was inconclusive, analysis of Xist and Y chromosome genes in the sequence data suggests female and the gender has been altered accordingly.

text: Mus musculus


characteristic: ArrayExpress-DevelopmentalStage

text: C57BL/6N / C57BL/6N

characteristic: ArrayExpress-Genotype

text: Whole embryo

text: female

text: Mus musculus

text: SC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: house mouse

text: Mus musculus

characteristic: organism

text: Total RNA from a single wildtype female E9.5 24 somite mouse embryo with Bap1 / C57BL/6N parents. This study forms part of the Deciphering the Mechanisms of Developmental Disorders (DMDD) project.

text: Mus musculus


text: Bap1 / Bap1

text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: female

characteristic: ArrayExpress-Sex

text: Mus musculus

characteristic: ArrayExpress-StrainOrLine

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: house mouse

characteristic: common name

text: Mus musculus

text: Total RNA from a single homozygous female E9.5 9 somite mouse embryo for allele Bap1tm1a(EUCOMM)hmgu, with heterozygous Bap1 / C57BL/6N parents. This study forms part of the Deciphering the Mechanisms of Developmental Disorders (DMDD) project.

text: Mus musculus


text: Bap1 / C57BL/6N

text: Whole embryo

text: female

text: Mus musculus

characteristic: ENA-LAST-UPDATE

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: house mouse

text: Mus musculus

text: Total RNA from a single heterozygous female E9.5 22 somite mouse embryo for allele Bap1tm1a(EUCOMM)hmgu, with heterozygous Bap1 / C57BL/6N parents. This study forms part of the Deciphering the Mechanisms of Developmental Disorders (DMDD) project.

characteristic: sample description

text: Mus musculus

characteristic: strain


text: Bap1 / C57BL/6N

text: Whole embryo

text: female

text: Mus musculus

characteristic: ArrayExpress-Species

characteristic: ENA-CHECKLIST

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: house mouse

text: Mus musculus

text: Total RNA from a single heterozygous female E9.5 25 somite mouse embryo for allele Bap1tm1a(EUCOMM)hmgu, with heterozygous Bap1 / C57BL/6N parents. This study forms part of the Deciphering the Mechanisms of Developmental Disorders (DMDD) project.

text: Mus musculus

characteristic: title


characteristic: ArrayExpress-DevelopmentalStage

text: Bap1 / Bap1

characteristic: ArrayExpress-Genotype

text: Whole embryo

text: female

text: Mus musculus

text: SC

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: house mouse

text: Mus musculus

text: Total RNA from a single homozygous female E9.5 6 somite mouse embryo for allele Bap1tm1a(EUCOMM)hmgu, with heterozygous Bap1 / C57BL/6N parents. This study forms part of the Deciphering the Mechanisms of Developmental Disorders (DMDD) project. Embryo was originally genotyped by detecting disrupted allele with qPCR on yolk sac DNA as heterozygous. However, lacZ expression detected in the sequence suggests homozygous, therefore the genotype has been altered accordingly.

text: Mus musculus


text: Ift140 / C57BL/6N

text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: female

characteristic: ArrayExpress-Sex

text: Mus musculus

characteristic: ArrayExpress-StrainOrLine

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: house mouse

text: Mus musculus

characteristic: organism

text: Total RNA from a single heterozygous female E9.5 25 somite mouse embryo for allele Ift140tm1a(EUCOMM)wtsi, with heterozygous Ift140 / C57BL/6N parents. This study forms part of the Deciphering the Mechanisms of Developmental Disorders (DMDD) project.

text: Mus musculus


text: C57BL/6N / C57BL/6N

text: Whole embryo

text: female

text: Mus musculus

characteristic: ENA-LAST-UPDATE

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: house mouse

characteristic: common name

text: Mus musculus

text: Total RNA from a single heterozygous female E9.5 24 somite mouse embryo for allele Ift140tm1a(EUCOMM)wtsi, with heterozygous Ift140 / C57BL/6N parents. This study forms part of the Deciphering the Mechanisms of Developmental Disorders (DMDD) project. Embryo was originally genotyped by detecting disrupted allele with qPCR on yolk sac DNA as wildtype. However, lacZ expression detected in the sequence suggests heterozygous, therefore the genotype has been altered accordingly.

characteristic: sample description

text: Mus musculus


text: Ift140 / Ift140

text: Whole embryo

text: male

text: Mus musculus

characteristic: ArrayExpress-Species

characteristic: ENA-CHECKLIST

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: house mouse

text: Mus musculus

text: Total RNA from a single homozygous male E9.5 25 somite mouse embryo for allele Ift140tm1a(EUCOMM)wtsi, with heterozygous Ift140 / C57BL/6N parents. This study forms part of the Deciphering the Mechanisms of Developmental Disorders (DMDD) project.

text: Mus musculus

characteristic: strain


characteristic: ArrayExpress-DevelopmentalStage

text: Ift140 / C57BL/6N

characteristic: ArrayExpress-Genotype

text: Whole embryo

text: female

text: Mus musculus

text: SC

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: house mouse

text: Mus musculus

text: Total RNA from a single homozygous female E9.5 25 somite mouse embryo for allele Ift140tm1a(EUCOMM)wtsi, with heterozygous Ift140 / C57BL/6N parents. This study forms part of the Deciphering the Mechanisms of Developmental Disorders (DMDD) project. Embryo was originally genotyped by detecting disrupted allele with qPCR on yolk sac DNA as heterozygous. However, lacZ expression detected in the sequence suggests homozygous, therefore the genotype has been altered accordingly.

text: Mus musculus

characteristic: title


text: Ift140 / Ift140

text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: male

characteristic: ArrayExpress-Sex

text: Mus musculus

characteristic: ArrayExpress-StrainOrLine

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

characteristic: Submitter Id

text: house mouse

text: Mus musculus

text: Total RNA from a single heterozygous male E9.5 24 somite mouse embryo for allele Ift140tm1a(EUCOMM)wtsi, with heterozygous Ift140 / C57BL/6N parents. This study forms part of the Deciphering the Mechanisms of Developmental Disorders (DMDD) project. Embryo was originally genotyped by detecting disrupted allele with qPCR on yolk sac DNA as homozygous. However, lacZ expression detected in the sequence suggests heterozygous, therefore the genotype has been altered accordingly.

text: Mus musculus


text: C57BL/6N / C57BL/6N

text: Whole embryo

text: male

text: Mus musculus

characteristic: ENA-LAST-UPDATE

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: house mouse

characteristic: common name

text: Mus musculus

characteristic: organism

text: Total RNA from a single heterozygous male E9.5 25 somite mouse embryo for allele Ift140tm1a(EUCOMM)wtsi, with heterozygous Ift140 / C57BL/6N parents. This study forms part of the Deciphering the Mechanisms of Developmental Disorders (DMDD) project. Embryo was originally genotyped by detecting disrupted allele with qPCR on yolk sac DNA as wildtype. However, lacZ expression detected in the sequence suggests heterozygous, therefore the genotype has been altered accordingly.

text: Mus musculus


text: Ift140 / Ift140

text: Whole embryo

text: female

text: Mus musculus

characteristic: ArrayExpress-Species

characteristic: ENA-CHECKLIST

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: house mouse

text: Mus musculus

text: Total RNA from a single heterozygous female E9.5 19 somite mouse embryo for allele Ift140tm1a(EUCOMM)wtsi, with heterozygous Ift140 / C57BL/6N parents. This study forms part of the Deciphering the Mechanisms of Developmental Disorders (DMDD) project. Embryo was originally genotyped by detecting disrupted allele with qPCR on yolk sac DNA as homozygous. However, lacZ expression detected in the sequence suggests heterozygous, therefore the genotype has been altered accordingly.

characteristic: sample description

text: Mus musculus


characteristic: ArrayExpress-DevelopmentalStage

text: Ift140 / C57BL/6N

characteristic: ArrayExpress-Genotype

text: Whole embryo

text: male

text: Mus musculus

text: SC

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: house mouse

text: Mus musculus

text: Total RNA from a single heterozygous male E9.5 23 somite mouse embryo for allele Ift140tm1a(EUCOMM)wtsi, with heterozygous Ift140 / C57BL/6N parents. This study forms part of the Deciphering the Mechanisms of Developmental Disorders (DMDD) project.

text: Mus musculus

characteristic: strain


text: Ift140 / Ift140

text: Whole embryo

characteristic: ArrayExpress-OrganismPart

text: female

characteristic: ArrayExpress-Sex

text: Mus musculus

characteristic: ArrayExpress-StrainOrLine

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: house mouse

text: Mus musculus

text: Total RNA from a single homozygous female E9.5 21 somite mouse embryo for allele Ift140tm1a(EUCOMM)wtsi, with heterozygous Ift140 / C57BL/6N parents. This study forms part of the Deciphering the Mechanisms of Developmental Disorders (DMDD) project.

text: Mus musculus

characteristic: title


text: Ift140 / Ift140

text: Whole embryo

text: female

text: Mus musculus

characteristic: ENA-LAST-UPDATE

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: house mouse

characteristic: common name

text: Mus musculus

text: Total RNA from a single homozygous female E9.5 20 somite mouse embryo for allele Ift140tm1a(EUCOMM)wtsi, with heterozygous Ift140 / C57BL/6N parents. This study forms part of the Deciphering the Mechanisms of Developmental Disorders (DMDD) project.

text: Mus musculus


text: Ift140 / Ift140

text: Whole embryo

text: male

text: Mus musculus

characteristic: ArrayExpress-Species

characteristic: ENA-CHECKLIST

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: house mouse

text: Mus musculus

characteristic: organism

text: Total RNA from a single heterozygous male E9.5 22 somite mouse embryo for allele Ift140tm1a(EUCOMM)wtsi, with heterozygous Ift140 / C57BL/6N parents. This study forms part of the Deciphering the Mechanisms of Developmental Disorders (DMDD) project.

text: Mus musculus


characteristic: ArrayExpress-DevelopmentalStage

text: C57BL/6N / C57BL/6N

characteristic: ArrayExpress-Genotype

text: Whole embryo

text: male

text: Mus musculus

text: SC

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: house mouse

text: Mus musculus

text: Total RNA from a single heterozygous male E9.5 11 somite mouse embryo for allele Ift140tm1a(EUCOMM)wtsi, with heterozygous Ift140 / C57BL/6N parents. This study forms part of the Deciphering the Mechanisms of Developmental Disorders (DMDD) project. Using the yolk sac the embryo gender was inconclusive, however, analysis of Xist and Y chromosome genes in the sequence data suggests male and the gender has been altered accordingly.

characteristic: sample description

text: Mus musculus


characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

characteristic: anonymized name

characteristic: collection date

text: Streptococcus pneumoniae

text: Gambia

characteristic: country

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text: NP swab

characteristic: isolation source

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

characteristic: serovar

text: Human

characteristic: specific host

characteristic: strain

characteristic: sub strain


text: Streptococcus pneumoniae

characteristic: ArrayExpress-Species

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text: SC

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae


characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC first public

text: public

characteristic: SRA accession

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text: Streptococcus pneumoniae

characteristic: common name

text: Gambia

text: Pneumonia

text: Blood

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

text: Human

characteristic: title


text: SC

text: public

characteristic: collection date

text: Streptococcus pneumoniae

text: Gambia

characteristic: country

text: Meningitis

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characteristic: isolation source

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

characteristic: serovar

text: Human

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text: SC

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text: public

text: Streptococcus pneumoniae

text: Gambia

text: Septicaemia

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text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human

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text: SC

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text: public

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text: Streptococcus pneumoniae

text: Gambia

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text: Streptococcus pneumoniae

text: Human


text: SC

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characteristic: collection date

text: Streptococcus pneumoniae

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text: Gambia

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text: CSF

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

text: Human

characteristic: title


characteristic: ENA-CHECKLIST

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text: SC

text: public

text: Streptococcus pneumoniae

text: Gambia

text: Septicaemia

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characteristic: isolation source

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

characteristic: serovar

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text: Streptococcus pneumoniae

text: Gambia

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text: Homo sapiens

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characteristic: isolate

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text: respiratory tract

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human

characteristic: sub strain

value: CLSI

value: mm


text: SC

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text: Streptococcus pneumoniae

characteristic: common name

text: Gambia

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text: Streptococcus

text: Homo sapiens

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text: male

text: Blood

text: blood

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

text: Human

value: resistant


characteristic: ENA-CHECKLIST

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text: SC

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text: Streptococcus pneumoniae

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characteristic: isolation source

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

characteristic: serovar

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text: SC

characteristic: INSDC center name

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text: public

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text: Streptococcus pneumoniae

text: Gambia

text: Pneumonia

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human

characteristic: sub strain


text: SC

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text: GMB

characteristic: Submitter Id

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text: Streptococcus pneumoniae

characteristic: common name

text: Gambia

characteristic: country

text: Streptococcus

characteristic: genus

text: Homo sapiens

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text: Meningitis

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text: central nervous system

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human


characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

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text: Streptococcus pneumoniae

text: Gambia

text: Streptococcus

text: Homo sapiens

text: IPD

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text: blood

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

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text: blood

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human

characteristic: sub strain

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text: SC

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text: Streptococcus pneumoniae

characteristic: common name

text: Gambia

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text: pneumonia

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text: Blood

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human


characteristic: ENA-LAST-UPDATE

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text: SC

text: public

text: GMB

text: Streptococcus pneumoniae

text: Gambia

text: Streptococcus

characteristic: genus

text: Homo sapiens

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text: Blood

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text: blood

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

characteristic: serovar

text: Human

characteristic: specific host


text: SC

characteristic: INSDC center name

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text: public

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text: Streptococcus pneumoniae

text: Gambia

text: Streptococcus

text: Homo sapiens

text: IPD

text: Blood

text: blood

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human

characteristic: strain

characteristic: sub strain


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characteristic: External Id

text: SC

text: public

text: GMB

characteristic: collection date

text: Streptococcus pneumoniae

characteristic: common name

text: Gambia

characteristic: country

text: Streptococcus

text: Homo sapiens

text: Meningitis

characteristic: host status

text: CSF

text: central nervous system

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human

characteristic: title


text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Streptococcus pneumoniae

text: Gambia

text: Pneumonia

text: Blood

characteristic: isolation source

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

characteristic: serovar

text: Human

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text: Streptococcus pneumoniae

characteristic: ArrayExpress-Species

text: SC

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text: public

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text: Streptococcus pneumoniae

text: Streptococcus pneumoniae


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

characteristic: anonymized name

text: Streptococcus pneumoniae

text: Gambia

text: Disease

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human

characteristic: strain

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text: SC

characteristic: INSDC center name

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text: public

characteristic: collection date

text: Streptococcus pneumoniae

characteristic: common name

text: Gambia

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text: Septicaemia

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text: Blood

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human

characteristic: title


text: SC

characteristic: INSDC last update

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text: Streptococcus pneumoniae

text: Gambia

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text: Lung Aspirate

characteristic: isolation source

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

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text: Human

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text: SC

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text: Streptococcus pneumoniae

text: Gambia

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text: NP swab

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human


text: SC

characteristic: INSDC center name

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text: public

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text: Streptococcus pneumoniae

text: Gambia

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text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human

characteristic: strain

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text: SC

characteristic: INSDC last update

text: public

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text: Streptococcus pneumoniae

characteristic: common name

text: Gambia

characteristic: country

text: Severe lower tract respiratory infection

characteristic: host status

text: Blood

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human

characteristic: title


characteristic: ENA-CHECKLIST

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text: SC

text: public

text: Streptococcus pneumoniae

text: Gambia

text: Sepsis and nephrotic syndrome

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characteristic: isolation source

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

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text: Human

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text: Streptococcus pneumoniae

text: Gambia

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text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human


text: SC

characteristic: INSDC last update

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characteristic: INSDC status

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text: Streptococcus pneumoniae

text: Gambia

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text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human

characteristic: strain

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text: SC

text: public

text: Streptococcus pneumoniae

characteristic: common name

text: Gambia

characteristic: country

text: Carriage

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text: NP swab

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human

characteristic: title


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text: SC

text: public

text: Streptococcus pneumoniae

text: Gambia

text: Carriage

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characteristic: isolation source

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

text: NT

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text: SC

characteristic: INSDC center name

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text: Streptococcus pneumoniae

text: Gambia

text: Meningitis

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text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human


characteristic: ENA-CHECKLIST

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text: SC

text: public

characteristic: anonymized name

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text: Streptococcus pneumoniae

text: Gambia

text: Meningitis

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text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human

characteristic: strain

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characteristic: ENA-LAST-UPDATE

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text: SC

text: public

text: Streptococcus pneumoniae

characteristic: common name

text: Gambia

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text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human

characteristic: title


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characteristic: INSDC center name

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text: Gambia

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characteristic: genus

text: Homo sapiens

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text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

characteristic: serovar

text: Human

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text: Streptococcus pneumoniae

text: Gambia

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text: Homo sapiens

text: Meningitis

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text: central nervous system

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human

characteristic: strain


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text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Streptococcus pneumoniae

characteristic: common name

text: Gambia

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text: Pneumonia

characteristic: host status

text: Blood

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Human

characteristic: sub strain

characteristic: title


text: synthetic construct

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characteristic: ENA-CHECKLIST

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text: SC

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text: synthetic construct

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text: synthetic construct


text: COPENHAGEN UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:COPENHAGEN UNIVERSITY

characteristic: Submitter Id

unit: m

characteristic: depth

text: The microbial communities of active layer permafrost in Adventdalen, Svalbard. Samples where collected from June 2010 till May 2011

characteristic: description

text: meadow

characteristic: environment (biome)

text: meadow

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: uncultured bacterium

text: F515 GTGCCAGCMGCCGCGGTAA R806 GGACTACHVGGGTWTCTAAT

characteristic: pcr primers

characteristic: ph

characteristic: project name

text: uncultured bacterium

text: Ilumina HiSeq 150 bp

characteristic: sequencing method

text: soil

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unit: µg/L

characteristic: total nitrogen

unit: g/kg

characteristic: total organic carbon

unit: g/g

characteristic: water content


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characteristic: ENA-LAST-UPDATE

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text: COPENHAGEN UNIVERSITY

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: depth

text: The microbial communities of active layer permafrost in Adventdalen, Svalbard. Samples where collected from June 2010 till May 2012

characteristic: description

text: meadow

text: meadow

text: soil

text: Norway

text: metagenome

text: uncultured bacterium

characteristic: organism

text: uncultured bacterium

text: Ilumina HiSeq 150 bp

text: soil

characteristic: title


text: COPENHAGEN UNIVERSITY

text: public

text: The microbial communities of active layer permafrost in Adventdalen, Svalbard. Samples where collected from June 2010 till May 2013

text: meadow

characteristic: environment (biome)

text: meadow

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: uncultured bacterium

characteristic: pcr primers

characteristic: ph

characteristic: project name

text: uncultured bacterium

text: Ilumina HiSeq 150 bp

characteristic: sequencing method

text: soil

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characteristic: total nitrogen

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characteristic: ENA-LAST-UPDATE

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text: COPENHAGEN UNIVERSITY

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: depth

text: The microbial communities of active layer permafrost in Adventdalen, Svalbard. Samples where collected from June 2010 till May 2014

characteristic: description

text: meadow

text: meadow

text: soil

text: Norway

text: metagenome

text: uncultured bacterium

characteristic: organism

text: uncultured bacterium

text: Ilumina HiSeq 150 bp

text: soil

characteristic: water content


text: COPENHAGEN UNIVERSITY

text: public

text: The microbial communities of active layer permafrost in Adventdalen, Svalbard. Samples where collected from June 2010 till May 2015

text: meadow

characteristic: environment (biome)

text: meadow

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: uncultured bacterium

characteristic: pcr primers

characteristic: ph

characteristic: project name

text: uncultured bacterium

text: Ilumina HiSeq 150 bp

characteristic: sequencing method

text: soil

characteristic: soil environmental package

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characteristic: total nitrogen


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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: depth

text: The microbial communities of active layer permafrost in Adventdalen, Svalbard. Samples where collected from June 2010 till May 2016

characteristic: description

text: meadow

text: meadow

text: soil

text: Norway

text: metagenome

text: uncultured bacterium

characteristic: organism

text: uncultured bacterium

text: Ilumina HiSeq 150 bp

text: soil

characteristic: total organic carbon


text: COPENHAGEN UNIVERSITY

text: public

text: The microbial communities of active layer permafrost in Adventdalen, Svalbard. Samples where collected from June 2010 till May 2017

text: meadow

characteristic: environment (biome)

text: meadow

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: uncultured bacterium

characteristic: pcr primers

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characteristic: project name

text: uncultured bacterium

text: Ilumina HiSeq 150 bp

characteristic: sequencing method

text: soil

characteristic: soil environmental package

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characteristic: water content


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characteristic: ENA-LAST-UPDATE

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text: COPENHAGEN UNIVERSITY

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: depth

text: The microbial communities of active layer permafrost in Adventdalen, Svalbard. Samples where collected from June 2010 till May 2018

characteristic: description

text: meadow

text: meadow

text: soil

text: Norway

text: metagenome

text: uncultured bacterium

characteristic: organism

text: uncultured bacterium

text: Ilumina HiSeq 150 bp

text: soil

characteristic: total nitrogen


text: COPENHAGEN UNIVERSITY

text: public

text: The microbial communities of active layer permafrost in Adventdalen, Svalbard. Samples where collected from June 2010 till May 2019

text: meadow

characteristic: environment (biome)

text: meadow

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: uncultured bacterium

characteristic: pcr primers

characteristic: ph

characteristic: project name

text: uncultured bacterium

text: Ilumina HiSeq 150 bp

characteristic: sequencing method

text: soil

characteristic: soil environmental package

characteristic: title

characteristic: total organic carbon


characteristic: ENA-CHECKLIST

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text: COPENHAGEN UNIVERSITY

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: depth

text: The microbial communities of active layer permafrost in Adventdalen, Svalbard. Samples where collected from June 2010 till May 2020

characteristic: description

text: meadow

text: meadow

text: soil

text: Norway

text: metagenome

text: uncultured bacterium

characteristic: organism

text: uncultured bacterium

text: Ilumina HiSeq 150 bp

text: soil

characteristic: water content


text: COPENHAGEN UNIVERSITY

text: public

text: The microbial communities of active layer permafrost in Adventdalen, Svalbard. Samples where collected from June 2010 till May 2021

text: meadow

characteristic: environment (biome)

text: meadow

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: uncultured bacterium

characteristic: pcr primers

characteristic: ph

characteristic: project name

text: uncultured bacterium

text: Ilumina HiSeq 150 bp

characteristic: sequencing method

text: soil

characteristic: soil environmental package

characteristic: title

characteristic: total nitrogen


characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: COPENHAGEN UNIVERSITY

characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: depth

text: The microbial communities of active layer permafrost in Adventdalen, Svalbard. Samples where collected from June 2010 till May 2022

characteristic: description

text: meadow

text: meadow

text: soil

text: Norway

text: metagenome

text: uncultured bacterium

characteristic: organism

text: uncultured bacterium

text: Ilumina HiSeq 150 bp

text: soil

characteristic: total organic carbon


text: COPENHAGEN UNIVERSITY

text: public

text: The microbial communities of active layer permafrost in Adventdalen, Svalbard. Samples where collected from June 2010 till May 2023

text: meadow

characteristic: environment (biome)

text: meadow

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: uncultured bacterium

characteristic: pcr primers

characteristic: ph

characteristic: project name

text: uncultured bacterium

text: Ilumina HiSeq 150 bp

characteristic: sequencing method

text: soil

characteristic: soil environmental package

characteristic: title

characteristic: water content


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: COPENHAGEN UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: depth

text: The microbial communities of active layer permafrost in Adventdalen, Svalbard. Samples where collected from June 2010 till May 2024

characteristic: description

text: meadow

text: meadow

text: soil

text: Norway

text: metagenome

text: uncultured bacterium

characteristic: organism

text: uncultured bacterium

text: Ilumina HiSeq 150 bp

text: soil

characteristic: total nitrogen


text: COPENHAGEN UNIVERSITY

text: public

text: The microbial communities of active layer permafrost in Adventdalen, Svalbard. Samples where collected from June 2010 till May 2025

text: meadow

characteristic: environment (biome)

text: meadow

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: uncultured bacterium

characteristic: pcr primers

characteristic: ph

characteristic: project name

text: uncultured bacterium

text: Ilumina HiSeq 150 bp

characteristic: sequencing method

text: soil

characteristic: soil environmental package

characteristic: title

characteristic: total organic carbon


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: COPENHAGEN UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: depth

text: The microbial communities of active layer permafrost in Adventdalen, Svalbard. Samples where collected from June 2010 till May 2026

characteristic: description

text: meadow

text: meadow

text: soil

text: Norway

text: metagenome

text: uncultured bacterium

characteristic: organism

text: uncultured bacterium

text: Ilumina HiSeq 150 bp

text: soil

characteristic: water content


text: COPENHAGEN UNIVERSITY

text: public

text: The microbial communities of active layer permafrost in Adventdalen, Svalbard. Samples where collected from June 2010 till May 2027

text: meadow

characteristic: environment (biome)

text: meadow

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: uncultured bacterium

characteristic: pcr primers

characteristic: ph

characteristic: project name

text: uncultured bacterium

text: Ilumina HiSeq 150 bp

characteristic: sequencing method

text: soil

characteristic: soil environmental package

characteristic: title

characteristic: total nitrogen


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: COPENHAGEN UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: depth

text: The microbial communities of active layer permafrost in Adventdalen, Svalbard. Samples where collected from June 2010 till May 2028

characteristic: description

text: meadow

text: meadow

text: soil

text: Norway

text: metagenome

text: uncultured bacterium

characteristic: organism

text: F515 GTGCCAGCMGCCGCGGTAA R806 GGACTACHVGGGTWTCTAAT

text: uncultured bacterium

text: Ilumina HiSeq 150 bp

text: soil

characteristic: total organic carbon


text: COPENHAGEN UNIVERSITY

text: public

text: The microbial communities of active layer permafrost in Adventdalen, Svalbard. Samples where collected from June 2010 till May 2029

text: meadow

characteristic: environment (biome)

text: meadow

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: uncultured bacterium

characteristic: pcr primers

characteristic: ph

characteristic: project name

text: uncultured bacterium

text: Ilumina HiSeq 150 bp

characteristic: sequencing method

text: soil

characteristic: soil environmental package

characteristic: title

characteristic: water content


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: COPENHAGEN UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: depth

text: The microbial communities of active layer permafrost in Adventdalen, Svalbard. Samples where collected from June 2010 till May 2030

characteristic: description

text: meadow

text: meadow

text: soil

text: Norway

text: metagenome

text: uncultured bacterium

characteristic: organism

text: uncultured bacterium

text: Ilumina HiSeq 150 bp

text: soil

characteristic: total nitrogen


text: COPENHAGEN UNIVERSITY

text: public

text: The microbial communities of active layer permafrost in Adventdalen, Svalbard. Samples where collected from June 2010 till May 2031

text: meadow

characteristic: environment (biome)

text: meadow

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: uncultured bacterium

characteristic: pcr primers

characteristic: ph

characteristic: project name

text: uncultured bacterium

text: Ilumina HiSeq 150 bp

characteristic: sequencing method

text: soil

characteristic: soil environmental package

characteristic: title

characteristic: total organic carbon


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: COPENHAGEN UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: depth

text: The microbial communities of active layer permafrost in Adventdalen, Svalbard. Samples where collected from June 2010 till May 2032

characteristic: description

text: meadow

text: meadow

text: soil

text: Norway

text: metagenome

text: uncultured bacterium

characteristic: organism

text: uncultured bacterium

text: Ilumina HiSeq 150 bp

text: soil

characteristic: water content


text: COPENHAGEN UNIVERSITY

text: public

text: The microbial communities of active layer permafrost in Adventdalen, Svalbard. Samples where collected from June 2010 till May 2033

text: meadow

characteristic: environment (biome)

text: meadow

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: uncultured bacterium

characteristic: pcr primers

characteristic: ph

characteristic: project name

text: uncultured bacterium

text: Ilumina HiSeq 150 bp

characteristic: sequencing method

text: soil

characteristic: soil environmental package

characteristic: title

characteristic: total nitrogen


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: COPENHAGEN UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: depth

text: The microbial communities of active layer permafrost in Adventdalen, Svalbard. Samples where collected from June 2010 till May 2034

characteristic: description

text: meadow

text: meadow

text: soil

text: Norway

text: metagenome

text: uncultured bacterium

characteristic: organism

text: uncultured bacterium

text: Ilumina HiSeq 150 bp

text: soil

characteristic: total organic carbon


text: COPENHAGEN UNIVERSITY

text: public

text: The microbial communities of active layer permafrost in Adventdalen, Svalbard. Samples where collected from June 2010 till May 2035

text: meadow

characteristic: environment (biome)

text: meadow

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: uncultured bacterium

characteristic: pcr primers

characteristic: ph

characteristic: project name

text: uncultured bacterium

text: Ilumina HiSeq 150 bp

characteristic: sequencing method

text: soil

characteristic: soil environmental package

characteristic: title

characteristic: water content


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: COPENHAGEN UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: depth

text: The microbial communities of active layer permafrost in Adventdalen, Svalbard. Samples where collected from June 2010 till May 2036

characteristic: description

text: meadow

text: meadow

text: soil

text: Norway

text: metagenome

text: uncultured bacterium

characteristic: organism

text: uncultured bacterium

text: Ilumina HiSeq 150 bp

text: soil

characteristic: total nitrogen


text: COPENHAGEN UNIVERSITY

text: public

text: The microbial communities of active layer permafrost in Adventdalen, Svalbard. Samples where collected from June 2010 till May 2037

text: meadow

characteristic: environment (biome)

text: meadow

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: uncultured bacterium

characteristic: pcr primers

characteristic: ph

characteristic: project name

text: uncultured bacterium

text: Ilumina HiSeq 150 bp

characteristic: sequencing method

text: soil

characteristic: soil environmental package

characteristic: title

characteristic: total organic carbon


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: COPENHAGEN UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: depth

text: The microbial communities of active layer permafrost in Adventdalen, Svalbard. Samples where collected from June 2010 till May 2038

characteristic: description

text: meadow

text: meadow

text: soil

text: Norway

text: metagenome

text: uncultured bacterium

characteristic: organism

text: uncultured bacterium

text: Ilumina HiSeq 150 bp

text: soil

characteristic: water content


text: COPENHAGEN UNIVERSITY

text: public

text: The microbial communities of active layer permafrost in Adventdalen, Svalbard. Samples where collected from June 2010 till May 2039

text: meadow

characteristic: environment (biome)

text: meadow

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: uncultured bacterium

characteristic: pcr primers

characteristic: ph

characteristic: project name

text: uncultured bacterium

text: Ilumina HiSeq 150 bp

characteristic: sequencing method

text: soil

characteristic: soil environmental package

characteristic: title

characteristic: total nitrogen


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: COPENHAGEN UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: depth

text: The microbial communities of active layer permafrost in Adventdalen, Svalbard. Samples where collected from June 2010 till May 2040

characteristic: description

text: meadow

text: meadow

text: soil

text: Norway

text: metagenome

text: uncultured bacterium

characteristic: organism

text: uncultured bacterium

text: Ilumina HiSeq 150 bp

text: soil

characteristic: total organic carbon