E-MTAB-6337_3:Sample 42

text: The Francis Crick Institute

text: public

text: E-MTAB-6337_3:Sample 42

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: mouse embryonic stem cell

characteristic: cell type

text: house mouse

text: embryo

characteristic: developmental stage

text: normal

characteristic: disease

text: Mus musculus

characteristic: organism

text: Mus musculus

text: inner cell mass

text: Mus musculus

text: male

characteristic: strain

text: Sample 42

characteristic: title


E-MTAB-6337_3:Sample 43

status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The Francis Crick Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6337_3:Sample 43

tag: Namespace:The Francis Crick Institute

characteristic: Submitter Id

text: ArrayExpress

text: mouse neural progenitor cell

text: house mouse

characteristic: common name

text: Protocols: ATAC-seq was performed on ESCs and at each day of the differentiation following methods previously described by Buenrostro et al, 2013. Briefly, adherent cells were treated with StemPro Accutase to obtain a single cell suspension. Cells were counted and resuspended to obtain 50,000 cells per sample in ice-cold PBS. Mouse HM1 (wild type), T/Bra-/- and Cdx1,2,4-/- mutant ESC lines ( http://dx.doi.org/10.1016/j.devcel.2017.04.002 Gouti et al, 2017) and inducible Cdx2 ESCs (5ECER5G20, Niwa et al 2005, Cell DOI: 10.1016/j.cell.2005.08.040), were propagated on mitotically inactivated mouse embryonic fibroblasts (feeders) in DMEM knockout medium supplemented with 1000U/ml LIF, 10% cell-culture validated fetal bovine serum, penicillin/streptomycin, 2mM L-glutamine. To obtain neural progenitors with anterior, hindbrain or spinal cord neural identity, ESCs were differentiated as previously described (https://doi.org/10.1371/journal.pbio.1001937 Gouti et al, 2014). Briefly, ESCs were dissociated with 0.05% trypsin, and plated on gelatin-coated plates for two sequential 20 minute periods in ESC medium to separate them from their feeders. To start the differentiation, cells remaining in the supernatant were pelleted by centrifugation, washed in PBS, and pelleted again. Cells were counted and resuspended in N2B27 medium containing 10ng/ml bFGF to a concentration of 106 cells per ml, and 50,000 cells per 35mm CELLBIND dish were plated. To generate anterior neural progenitors, the cells were grown up to day 3 in N2B27 + 10ng/ml bFGF, followed by N2B27 + 500nM smoothened agonist (SAG; Calbiochem) from day 3-5. To generate hindbrain neural progenitors, cells were cultured under the same conditions as the anterior, but were additionally exposed to 100nM retinoic acid (RA; Sigma) from day 3-5. To generate spinal cord neural progenitors, cells were cultured with N2B27 + 10ng/ml bFGF until day 2, N2B27 + 10ng/ml bFGF + 5 micro M CHIR99021 until day 3, and N2B27 + 100nM RA + 500nM SAG until day 5. For the inducible CDX2 experiments, induction of CDX2 was performed using 5ECER4G20 ESCs (Niwa et al., 2005) by adding 1ug/ml of 4-hydroxy tamoxifen (Sigma) (Niwa et al., 2005) between D2-3 (in the presence of 10ng/ml bFGF in N2B27) or D4-5 (in the presence of 10ng/ml bFGF + 100nM RA + 500nM SHH in N2B27). For all differentiations, media changes were made every 24 hours from day 2. Cells were pelleted and resuspended in lysis buffer (10mM Tris-HCl pH 7.4, 10mM NaCl, 3mM MgCl2, 0.1% IGEPAL). Following a 10 min centrifugation at 4 degrees C, nucleic extracts were resupsended in transposition buffer (Illumina) for 30 minutes at 37 degrees C and purified using a Qiagen MinElute PCR Purification kit following manufacturer’s instructions. Transposed DNA was eluted in a 10 micro l volume. Transposed DNA was amplified by PCR with Nextera primers to generate single-indexed libraries. A maximum of 12 cycles of PCR (determined using optimisation experiments) was used to prevent saturation biases based on optimisation of qPCR cycles as previously described in Beunrostro et al 2015. Library quality control was carried out using the Bioanalyzer High-Sensitivity DNA analysis kit as per manufacturer’s instructions.

characteristic: description

text: embryonic day 9.5

text: normal

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: embryonic spinal cord

characteristic: organism part

text: Mus musculus

text: not available

characteristic: sex

text: Sample 43


E-MTAB-6337_3:Sample 44

text: The Francis Crick Institute

text: public

text: E-MTAB-6337_3:Sample 44

text: ArrayExpress

characteristic: broker name

text: mouse neural progenitor cell

characteristic: cell type

text: house mouse

text: embryonic day 9.5

characteristic: developmental stage

text: normal

characteristic: disease

text: Mus musculus

characteristic: organism

text: Mus musculus

text: embryonic spinal cord

text: Mus musculus

text: not available

characteristic: strain

text: Sample 44


E-MTAB-6337_3:Sample 5

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The Francis Crick Institute

characteristic: INSDC center name

text: public

text: E-MTAB-6337_3:Sample 5

text: ArrayExpress

text: HM1 ESC

characteristic: cell line

text: mouse embryonic stem cell

text: house mouse

text: embryo

text: normal

text: HPRT negative

text: Mus musculus

text: Mus musculus

text: inner cell mass

text: Mus musculus

text: male

text: Sample 5

characteristic: title


E-MTAB-6337_3:Sample 6

text: The Francis Crick Institute

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6337_3:Sample 6

characteristic: Submitter Id

text: ArrayExpress

text: HM1 ESC

text: mouse embryonic stem cell

text: house mouse

characteristic: common name

characteristic: description

text: embryo

text: normal

text: HPRT negative

text: Mus musculus

text: Mus musculus

text: inner cell mass

text: Mus musculus

text: male

text: Sample 6


E-MTAB-6337_3:Sample 7

text: The Francis Crick Institute

text: public

text: E-MTAB-6337_3:Sample 7

text: ArrayExpress

characteristic: broker name

text: HM1 ESC

text: mouse embryonic stem cell

characteristic: cell type

text: house mouse

text: embryo

characteristic: developmental stage

text: normal

characteristic: disease

text: HPRT negative

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: inner cell mass

characteristic: organism part

text: anterior neural progenitor differentiation

characteristic: protocol

text: Mus musculus

text: male

characteristic: sex

text: Sample 7


E-MTAB-6337_3:Sample 8

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The Francis Crick Institute

characteristic: INSDC center name

text: public

text: E-MTAB-6337_3:Sample 8

text: ArrayExpress

text: HM1 ESC

characteristic: cell line

text: mouse embryonic stem cell

text: house mouse

text: embryo

text: normal

text: HPRT negative

text: Mus musculus

characteristic: organism

text: Mus musculus

text: inner cell mass

text: Mus musculus

text: male

characteristic: strain

text: Sample 8


E-MTAB-6337_3:Sample 9

text: The Francis Crick Institute

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-6337_3:Sample 9

characteristic: Submitter Id

text: ArrayExpress

text: HM1 ESC

text: mouse embryonic stem cell

text: house mouse

characteristic: common name

characteristic: description

text: embryo

text: normal

text: HPRT negative

text: Mus musculus

text: Mus musculus

text: inner cell mass

text: Mus musculus

text: male

text: Sample 9

characteristic: title


E-MTAB-6910:Sample 13

text: public

text: E-MTAB-6910:Sample 13

tag: Namespace:Dept. of Developmental Biology and Cancer Research, School of Medicine, Hebrew University of Jerusalem

unit: month

characteristic: age

text: ArrayExpress

characteristic: broker name

text: microglial cell

characteristic: cell type

text: house mouse

text: Protocols: hippocampi were taken from Cx3cr1-GFP mice (3-4 mice pooled together per group). DG and CA1 were surgically removed under a stereoscope and collected into RNAse-free cold PBS. Dissociation was done using a neural tissue dissociation kit (Miltenyi Biotec, 130-092-628) and the gentleMACSTM Dissociator according to the manufacturer’s instructions. Myelin was removed using myelin removal beads II (Miltenyi Biotec, 130-096-733). The same procedure was done for endothelial cell sorting using Tie2-GFP mice. Sorting was done using BD Aria FACS and only GFP positive cells were collected. For endothelial cell sorting VEGF was switched-on (by tetracycline removal) for 1 months. For microglia sorting, VEGF was switched-on for 1 week. RNA was obtained using RNeasy plus Micro Kit (QIAGEN) according to manufacturer’s guidelines The libraries were constructed using TrueSeq RNA V2 kit of Illumina http://www.illumina.com/products/truseq_rna_sample_prep_kit_v2.html.

text: Cx3cr1-GFP; Camk2a-tTa

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: CA1 field of hippocampus

characteristic: organism part

text: GFP positive

characteristic: phenotype

text: Mus musculus

text: Sample 13


E-MTAB-6910:Sample 14

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Dept. of Developmental Biology and Cancer Research, School of Medicine, Hebrew University of Jerusalem

characteristic: INSDC center name

text: public

text: E-MTAB-6910:Sample 14

text: ArrayExpress

text: microglial cell

text: house mouse

text: Cx3cr1-GFP; Camk2a-tTa

text: Mus musculus

text: Mus musculus

text: CA1 field of hippocampus

text: GFP positive

text: Mus musculus

text: Sample 14


E-MTAB-6910:Sample 10

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-6910:Sample 10

text: ArrayExpress

text: microglial cell

text: house mouse

text: Cx3cr1-GFP; Camk2a-tTa

text: Mus musculus

characteristic: organism

text: Mus musculus

text: dentate gyrus of hippocampal formation

text: GFP positive

text: Mus musculus

text: Sample 10


E-MTAB-6910:Sample 9

text: public

characteristic: SRA accession

text: E-MTAB-6910:Sample 9

characteristic: Submitter Id

text: ArrayExpress

text: microglial cell

text: house mouse

characteristic: common name

characteristic: description

text: Cx3cr1-GFP; Camk2a-tTa

text: Mus musculus

text: Mus musculus

text: dentate gyrus of hippocampal formation

text: GFP positive

text: Mus musculus

text: Sample 9


E-MTAB-6910:Sample 15

text: public

text: E-MTAB-6910:Sample 15

characteristic: age

text: ArrayExpress

characteristic: broker name

text: microglial cell

characteristic: cell type

text: house mouse

text: Cx3cr1-GFP; Camk2a-tTa; tet-VEGF

text: Mus musculus

text: Mus musculus

text: CA1 field of hippocampus

text: GFP positive

text: Mus musculus

text: Sample 15

characteristic: title


E-MTAB-6910:Sample 16

characteristic: ENA-CHECKLIST

text: public

text: E-MTAB-6910:Sample 16

text: ArrayExpress

text: microglial cell

text: house mouse

text: Cx3cr1-GFP; Camk2a-tTa; tet-VEGF

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: CA1 field of hippocampus

characteristic: organism part

text: GFP positive

characteristic: phenotype

text: Mus musculus

text: Sample 16


E-MTAB-6910:Sample 11

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-6910:Sample 11

text: ArrayExpress

text: microglial cell

text: house mouse

text: Cx3cr1-GFP; Camk2a-tTa; tet-VEGF

text: Mus musculus

text: Mus musculus

text: dentate gyrus of hippocampal formation

text: GFP positive

text: Mus musculus

text: Sample 11


E-MTAB-6910:Sample 12

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-6910:Sample 12

text: ArrayExpress

text: microglial cell

text: house mouse

text: Cx3cr1-GFP; Camk2a-tTa; tet-VEGF

text: Mus musculus

characteristic: organism

text: Mus musculus

text: dentate gyrus of hippocampal formation

text: GFP positive

text: Mus musculus

text: Sample 12


E-MTAB-6910:Sample 5

text: public

characteristic: SRA accession

text: E-MTAB-6910:Sample 5

characteristic: Submitter Id

text: ArrayExpress

text: endothelial cell

text: house mouse

characteristic: common name

characteristic: description

text: Tie2-GFP; Camk2a-tTa

text: Mus musculus

text: Mus musculus

text: CA1 field of hippocampus

text: GFP positive

text: Mus musculus

text: Sample 5


E-MTAB-6910:Sample 6

text: public

text: E-MTAB-6910:Sample 6

characteristic: age

text: ArrayExpress

characteristic: broker name

text: endothelial cell

characteristic: cell type

text: house mouse

text: Tie2-GFP; Camk2a-tTa

text: Mus musculus

text: Mus musculus

text: CA1 field of hippocampus

text: GFP positive

text: Mus musculus

text: Sample 6

characteristic: title


E-MTAB-6910:Sample 1

characteristic: ENA-CHECKLIST

text: public

text: E-MTAB-6910:Sample 1

text: ArrayExpress

text: endothelial cell

text: house mouse

text: Tie2-GFP; Camk2a-tTa

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: dentate gyrus of hippocampal formation

characteristic: organism part

text: GFP positive

characteristic: phenotype

text: Mus musculus

text: Sample 1


E-MTAB-6910:Sample 2

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-6910:Sample 2

text: ArrayExpress

text: endothelial cell

text: house mouse

text: Tie2-GFP; Camk2a-tTa

text: Mus musculus

text: Mus musculus

text: dentate gyrus of hippocampal formation

text: GFP positive

text: Mus musculus

text: Sample 2


E-MTAB-6910:Sample 7

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-6910:Sample 7

text: ArrayExpress

text: endothelial cell

text: house mouse

text: Tie2-GFP; Camk2-tTa tet-VEGF

text: Mus musculus

characteristic: organism

text: Mus musculus

text: CA1 field of hippocampus

text: GFP positive

text: Mus musculus

text: Sample 7


E-MTAB-6910:Sample 8

text: public

characteristic: SRA accession

text: E-MTAB-6910:Sample 8

characteristic: Submitter Id

text: ArrayExpress

text: endothelial cell

text: house mouse

characteristic: common name

characteristic: description

text: Tie2-GFP; Camk2-tTa tet-VEGF

text: Mus musculus

text: Mus musculus

text: CA1 field of hippocampus

text: GFP positive

text: Mus musculus

text: Sample 8


E-MTAB-6910:Sample 3

text: public

text: E-MTAB-6910:Sample 3

characteristic: age

text: ArrayExpress

characteristic: broker name

text: endothelial cell

characteristic: cell type

text: house mouse

text: Tie2-GFP; Camk2-tTa tet-VEGF

text: Mus musculus

text: Mus musculus

text: dentate gyrus of hippocampal formation

text: GFP positive

text: Mus musculus

text: Sample 3

characteristic: title


E-MTAB-6910:Sample 4

characteristic: ENA-CHECKLIST

text: public

text: E-MTAB-6910:Sample 4

text: ArrayExpress

text: endothelial cell

text: house mouse

text: Tie2-GFP; Camk2-tTa tet-VEGF

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: dentate gyrus of hippocampal formation

characteristic: organism part

text: GFP positive

characteristic: phenotype

text: Mus musculus

text: Sample 4


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

characteristic: anonymized name

text: Adrenal sampleid. 447

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal corpus

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: bodily fluid

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:adrenal gland

characteristic: host body habitat

text: UBERON:adrenal tissue

characteristic: host body product

text: UBERON:adrenal gland

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Adrenal sampleid. 447

text: mouse metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Adrenal

characteristic: sample type

characteristic: samplenum

text: mouse metagenome

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Adrenal sampleid. 448

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal corpus

text: urban biome

text: animal-associated habitat

text: host-associated

text: bodily fluid

text: USA:CA:San Diego

text: SPF

text: UBERON:adrenal gland

text: UBERON:adrenal tissue

text: UBERON:adrenal gland

text: mouse

text: Mus musculus

text: Adrenal sampleid. 448

text: mouse metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Adrenal

text: mouse metagenome

text: 3D Mouse

characteristic: title


text: UCSDMI

text: public

text: Bladder sampleid. 442

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal corpus

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: bodily fluid

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:genitourinary system

characteristic: host body habitat

text: UBERON:wall of bladder

characteristic: host body product

text: UBERON:urinary bladder

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Bladder sampleid. 442

text: mouse metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Bladder

characteristic: sample type

text: mouse metagenome

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Blood sampleid. 386

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal secretion

text: urban biome

text: animal-associated habitat

text: host-associated

text: blood

text: USA:CA:San Diego

text: SPF

text: UBERON:blood

text: UBERON:blood

text: UBERON:blood

text: mouse

text: Mus musculus

text: Blood sampleid. 386

text: mouse metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Blood

characteristic: samplenum

text: mouse metagenome

text: 3D Mouse


text: UCSDMI

text: public

text: Brain sampleid. 477

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal corpus

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: bodily fluid

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:central nervous system

characteristic: host body habitat

text: UBERON:central nervous system parenchyma

characteristic: host body product

text: UBERON:brain

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Brain sampleid. 477

text: mouse metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Brain

text: mouse metagenome

characteristic: title

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Brain sampleid. 478

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal corpus

text: urban biome

text: animal-associated habitat

text: host-associated

text: bodily fluid

text: USA:CA:San Diego

text: SPF

text: UBERON:central nervous system

text: UBERON:brain

text: mouse

text: Mus musculus

text: Brain sampleid. 478

text: mouse metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Brain

characteristic: sample type

text: mouse metagenome

text: 3D Mouse


text: UCSDMI

text: public

text: Brain sampleid. 479

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal corpus

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: bodily fluid

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:central nervous system

characteristic: host body habitat

characteristic: host body product

text: UBERON:brain

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Brain sampleid. 479

text: mouse metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Brain

characteristic: samplenum

text: mouse metagenome

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Brain sampleid. 480

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal corpus

text: urban biome

text: animal-associated habitat

text: host-associated

text: bodily fluid

text: USA:CA:San Diego

text: SPF

text: UBERON:central nervous system

text: UBERON:brain

text: mouse

text: Mus musculus

text: Brain sampleid. 480

text: mouse metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Brain

text: mouse metagenome

text: 3D Mouse

characteristic: title


text: UCSDMI

text: public

text: Cecum sampleid. 430

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: intestine environment

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:gastro-intestinal system

characteristic: host body habitat

text: UBERON:cecum mucosa

characteristic: host body product

text: UBERON:cecum

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Cecum sampleid. 430

text: mouse gut metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Cecum

characteristic: sample type

text: mouse gut metagenome

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Cecum sampleid. 431

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: intestine environment

text: USA:CA:San Diego

text: SPF

text: UBERON:gastro-intestinal system

text: UBERON:cecum mucosa

text: UBERON:cecum

text: mouse

text: Mus musculus

text: Cecum sampleid. 431

text: mouse gut metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Cecum

characteristic: samplenum

text: mouse gut metagenome

text: 3D Mouse


text: UCSDMI

text: public

text: Cecum sampleid. 432

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: intestine environment

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:gastro-intestinal system

characteristic: host body habitat

text: UBERON:cecum mucosa

characteristic: host body product

text: UBERON:cecum

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Cecum sampleid. 432

text: mouse gut metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Cecum

text: mouse gut metagenome

characteristic: title

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Cecum sampleid. 433

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: intestine environment

text: USA:CA:San Diego

text: SPF

text: UBERON:gastro-intestinal system

text: UBERON:cecum mucosa

text: UBERON:cecum

text: mouse

text: Mus musculus

text: Cecum sampleid. 433

text: mouse gut metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Cecum

characteristic: sample type

text: mouse gut metagenome

text: 3D Mouse


text: UCSDMI

text: public

text: Cecum sampleid. 434

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: intestine environment

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:gastro-intestinal system

characteristic: host body habitat

text: UBERON:cecum mucosa

characteristic: host body product

text: UBERON:cecum

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Cecum sampleid. 434

text: mouse gut metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Cecum

characteristic: samplenum

text: mouse gut metagenome

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Cecum sampleid. 435

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: intestine environment

text: USA:CA:San Diego

text: SPF

text: UBERON:gastro-intestinal system

text: UBERON:cecum mucosa

text: UBERON:cecum

text: mouse

text: Mus musculus

text: Cecum sampleid. 435

text: mouse gut metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Cecum

text: mouse gut metagenome

text: 3D Mouse

characteristic: title


text: UCSDMI

text: public

text: Colon sampleid. 436

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: intestine environment

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:gastro-intestinal system

characteristic: host body habitat

text: UBERON:wall of large intestine

characteristic: host body product

text: UBERON:colon

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Colon sampleid. 436

text: mouse gut metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Colon

characteristic: sample type

text: mouse gut metagenome

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Colon sampleid. 437

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: intestine environment

text: USA:CA:San Diego

text: SPF

text: UBERON:gastro-intestinal system

text: UBERON:wall of large intestine

text: UBERON:colon

text: mouse

text: Mus musculus

text: Colon sampleid. 437

text: mouse gut metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Colon

characteristic: samplenum

text: mouse gut metagenome

text: 3D Mouse


text: UCSDMI

text: public

text: Colon sampleid. 438

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: intestine environment

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:gastro-intestinal system

characteristic: host body habitat

text: UBERON:wall of large intestine

characteristic: host body product

text: UBERON:colon

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Colon sampleid. 438

text: mouse gut metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Colon

text: mouse gut metagenome

characteristic: title

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Colon sampleid. 439

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: intestine environment

text: USA:CA:San Diego

text: SPF

text: UBERON:gastro-intestinal system

text: UBERON:wall of large intestine

text: UBERON:colon

text: mouse

text: Mus musculus

text: Colon sampleid. 439

text: mouse gut metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Colon

characteristic: sample type

text: mouse gut metagenome

text: 3D Mouse


text: UCSDMI

text: public

text: Colon sampleid. 440

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: intestine environment

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:gastro-intestinal system

characteristic: host body habitat

text: UBERON:wall of large intestine

characteristic: host body product

text: UBERON:colon

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Colon sampleid. 440

text: mouse gut metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Colon

characteristic: samplenum

text: mouse gut metagenome

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Colon sampleid. 441

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: intestine environment

text: USA:CA:San Diego

text: SPF

text: UBERON:gastro-intestinal system

text: UBERON:wall of large intestine

text: UBERON:colon

text: mouse

text: Mus musculus

text: Colon sampleid. 441

text: mouse gut metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Colon

text: mouse gut metagenome

text: 3D Mouse

characteristic: title


text: UCSDMI

text: public

text: Cervix sampleid. 458

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal corpus

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: bodily fluid

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:genitourinary system

characteristic: host body habitat

text: UBERON:cervical mucosa

characteristic: host body product

text: UBERON:cervix

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Cervix sampleid. 458

text: mouse metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Cervix

characteristic: sample type

text: mouse metagenome

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Duodenum sampleid. 412

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal proximal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: intestine environment

text: USA:CA:San Diego

text: SPF

text: UBERON:gastro-intestinal system

text: UBERON:wall of small intestine

text: UBERON:duodenum

text: mouse

text: Mus musculus

text: Duodenum sampleid. 412

text: mouse gut metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Duodenum

characteristic: samplenum

text: mouse gut metagenome

text: 3D Mouse


text: UCSDMI

text: public

text: Duodenum sampleid. 413

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal proximal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: intestine environment

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:gastro-intestinal system

characteristic: host body habitat

text: UBERON:wall of small intestine

characteristic: host body product

text: UBERON:duodenum

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Duodenum sampleid. 413

text: mouse gut metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Duodenum

text: mouse gut metagenome

characteristic: title

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Duodenum sampleid. 414

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal proximal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: intestine environment

text: USA:CA:San Diego

text: SPF

text: UBERON:gastro-intestinal system

text: UBERON:wall of small intestine

text: UBERON:duodenum

text: mouse

text: Mus musculus

text: Duodenum sampleid. 414

text: mouse gut metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Duodenum

characteristic: sample type

text: mouse gut metagenome

text: 3D Mouse


text: UCSDMI

text: public

text: Duodenum sampleid. 415

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal proximal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: intestine environment

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:gastro-intestinal system

characteristic: host body habitat

text: UBERON:wall of small intestine

characteristic: host body product

text: UBERON:duodenum

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Duodenum sampleid. 415

text: mouse gut metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Duodenum

characteristic: samplenum

text: mouse gut metagenome

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Duodenum sampleid. 416

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal proximal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: intestine environment

text: USA:CA:San Diego

text: SPF

text: UBERON:gastro-intestinal system

text: UBERON:wall of small intestine

text: UBERON:duodenum

text: mouse

text: Mus musculus

text: Duodenum sampleid. 416

text: mouse gut metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Duodenum

text: mouse gut metagenome

text: 3D Mouse

characteristic: title


text: UCSDMI

text: public

text: Duodenum sampleid. 417

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal proximal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: intestine environment

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:gastro-intestinal system

characteristic: host body habitat

text: UBERON:wall of small intestine

characteristic: host body product

text: UBERON:duodenum

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Duodenum sampleid. 417

text: mouse gut metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Duodenum

characteristic: sample type

text: mouse gut metagenome

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Ear sampleid. 393

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal secretion

text: urban biome

text: animal-associated habitat

text: host-associated

text: sebum

text: USA:CA:San Diego

text: SPF

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of ear

text: mouse

text: Mus musculus

text: Ear sampleid. 393

text: mouse skin metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Ear

characteristic: samplenum

text: mouse skin metagenome

text: 3D Mouse


text: UCSDMI

text: public

text: Ear sampleid. 394

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal secretion

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: sebum

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:skin

characteristic: host body habitat

text: UBERON:sebum

characteristic: host body product

text: UBERON:skin of ear

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Ear sampleid. 394

text: mouse skin metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Ear

text: mouse skin metagenome

characteristic: title

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Esophagus sampleid. 472

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal proximal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: bodily fluid

text: USA:CA:San Diego

text: SPF

text: UBERON:gastro-intestinal system

text: UBERON:wall of esophagus

text: UBERON:esophagus

text: mouse

text: Mus musculus

text: Esophagus sampleid. 472

text: mouse gut metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Esophagus

characteristic: sample type

text: mouse gut metagenome

text: 3D Mouse


text: UCSDMI

text: public

text: Esophagus sampleid. 473

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal proximal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: bodily fluid

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:gastro-intestinal system

characteristic: host body habitat

text: UBERON:wall of esophagus

characteristic: host body product

text: UBERON:esophagus

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Esophagus sampleid. 473

text: mouse gut metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Esophagus

characteristic: samplenum

text: mouse gut metagenome

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Esophagus sampleid. 474

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal proximal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: bodily fluid

text: USA:CA:San Diego

text: SPF

text: UBERON:gastro-intestinal system

text: UBERON:wall of esophagus

text: UBERON:esophagus

text: mouse

text: Mus musculus

text: Esophagus sampleid. 474

text: mouse gut metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Esophagus

text: mouse gut metagenome

characteristic: title

text: 3D Mouse


text: UCSDMI

text: public

text: Esophagus sampleid. 475

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal proximal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: bodily fluid

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:gastro-intestinal system

characteristic: host body habitat

text: UBERON:wall of esophagus

characteristic: host body product

text: UBERON:esophagus

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Esophagus sampleid. 475

text: mouse gut metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Esophagus

characteristic: sample type

text: mouse gut metagenome

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Foot sampleid. 389

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal secretion

text: urban biome

text: animal-associated habitat

text: host-associated

text: sebum

text: USA:CA:San Diego

text: SPF

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of foot

text: mouse

text: Mus musculus

text: Foot sampleid. 389

text: mouse skin metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Foot

characteristic: samplenum

text: mouse skin metagenome

text: 3D Mouse


text: UCSDMI

text: public

text: Foot sampleid. 390

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal secretion

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: sebum

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:skin

characteristic: host body habitat

text: UBERON:sebum

characteristic: host body product

text: UBERON:skin of foot

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Foot sampleid. 390

text: mouse skin metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Foot

text: mouse skin metagenome

characteristic: title

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Foot sampleid. 391

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal secretion

text: urban biome

text: animal-associated habitat

text: host-associated

text: sebum

text: USA:CA:San Diego

text: SPF

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of foot

text: mouse

text: Mus musculus

text: Foot sampleid. 391

text: mouse skin metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Foot

characteristic: sample type

text: mouse skin metagenome

text: 3D Mouse


text: UCSDMI

text: public

text: Foot sampleid. 392

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal secretion

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: sebum

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:skin

characteristic: host body habitat

text: UBERON:sebum

characteristic: host body product

text: UBERON:skin of foot

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Foot sampleid. 392

text: mouse skin metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Foot

characteristic: samplenum

text: mouse skin metagenome

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Gall bladder sampleid. 400

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal corpus

text: urban biome

text: animal-associated habitat

text: host-associated

text: bodily fluid

text: USA:CA:San Diego

text: SPF

text: UBERON:gall bladder

text: UBERON:body of gallbladder

text: UBERON:gall bladder

text: mouse

text: Mus musculus

text: Gall bladder sampleid. 400

text: mouse metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Gall bladder

text: mouse metagenome

characteristic: title

text: 3D Mouse


text: UCSDMI

text: public

text: Heart sampleid. 459

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal corpus

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: bodily fluid

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:cardiovascular system

characteristic: host body habitat

text: UBERON:anatomical wall

characteristic: host body product

text: UBERON:heart

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Heart sampleid. 459

text: mouse metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Heart

characteristic: sample type

text: mouse metagenome

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Heart sampleid. 460

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal corpus

text: urban biome

text: animal-associated habitat

text: host-associated

text: bodily fluid

text: USA:CA:San Diego

text: SPF

text: UBERON:cardiovascular system

text: UBERON:anatomical wall

text: UBERON:heart

text: mouse

text: Mus musculus

text: Heart sampleid. 460

text: mouse metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Heart

characteristic: samplenum

text: mouse metagenome

text: 3D Mouse


text: UCSDMI

text: public

text: Heart sampleid. 461

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal corpus

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: bodily fluid

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:cardiovascular system

characteristic: host body habitat

text: UBERON:anatomical wall

characteristic: host body product

text: UBERON:heart

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Heart sampleid. 461

text: mouse metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Heart

text: mouse metagenome

characteristic: title

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Heart sampleid. 462

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal corpus

text: urban biome

text: animal-associated habitat

text: host-associated

text: bodily fluid

text: USA:CA:San Diego

text: SPF

text: UBERON:cardiovascular system

text: UBERON:anatomical wall

text: UBERON:heart

text: mouse

text: Mus musculus

text: Heart sampleid. 462

text: mouse metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Heart

characteristic: sample type

text: mouse metagenome

text: 3D Mouse


text: UCSDMI

text: public

text: small intestinal wall sampleid. 424

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal proximal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: intestine environment

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:gastro-intestinal system

characteristic: host body habitat

text: UBERON:small intestinal wall

characteristic: host body product

text: UBERON:UBERON:small intestinal wall

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: small intestinal wall sampleid. 424

text: mouse gut metagenome

text: Dorrestein UCSDMI

text: TRUE

text: small intestinal wall

characteristic: samplenum

text: mouse gut metagenome

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: small intestinal wall sampleid. 425

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal proximal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: intestine environment

text: USA:CA:San Diego

text: SPF

text: UBERON:gastro-intestinal system

text: UBERON:small intestinal wall

text: UBERON:UBERON:small intestinal wall

text: mouse

text: Mus musculus

text: small intestinal wall sampleid. 425

text: mouse gut metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: small intestinal wall

text: mouse gut metagenome

text: 3D Mouse

characteristic: title


text: UCSDMI

text: public

text: small intestinal wall sampleid. 426

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal proximal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: intestine environment

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:gastro-intestinal system

characteristic: host body habitat

text: UBERON:small intestinal wall

characteristic: host body product

text: UBERON:UBERON:small intestinal wall

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: small intestinal wall sampleid. 426

text: mouse gut metagenome

text: Dorrestein UCSDMI

text: TRUE

text: small intestinal wall

characteristic: sample type

text: mouse gut metagenome

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: small intestinal wall sampleid. 427

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal proximal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: intestine environment

text: USA:CA:San Diego

text: SPF

text: UBERON:gastro-intestinal system

text: UBERON:small intestinal wall

text: UBERON:UBERON:small intestinal wall

text: mouse

text: Mus musculus

text: small intestinal wall sampleid. 427

text: mouse gut metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: small intestinal wall

characteristic: samplenum

text: mouse gut metagenome

text: 3D Mouse


text: UCSDMI

text: public

text: small intestinal wall sampleid. 428

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal proximal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: intestine environment

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:gastro-intestinal system

characteristic: host body habitat

text: UBERON:small intestinal wall

characteristic: host body product

text: UBERON:UBERON:small intestinal wall

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: small intestinal wall sampleid. 428

text: mouse gut metagenome

text: Dorrestein UCSDMI

text: TRUE

text: small intestinal wall

text: mouse gut metagenome

characteristic: title

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: small intestinal wall sampleid. 429

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal proximal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: intestine environment

text: USA:CA:San Diego

text: SPF

text: UBERON:gastro-intestinal system

text: UBERON:small intestinal wall

text: UBERON:UBERON:small intestinal wall

text: mouse

text: Mus musculus

text: small intestinal wall sampleid. 429

text: mouse gut metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: small intestinal wall

characteristic: sample type

text: mouse gut metagenome

text: 3D Mouse


text: UCSDMI

text: public

text: Jejunum sampleid. 418

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal proximal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: intestine environment

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:gastro-intestinal system

characteristic: host body habitat

text: UBERON:small intestinal wall

characteristic: host body product

text: UBERON:jejunum

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Jejunum sampleid. 418

text: mouse gut metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Jejunum

characteristic: samplenum

text: mouse gut metagenome

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Jejunum sampleid. 419

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal proximal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: intestine environment

text: USA:CA:San Diego

text: SPF

text: UBERON:gastro-intestinal system

text: UBERON:small intestinal wall

text: UBERON:jejunum

text: mouse

text: Mus musculus

text: Jejunum sampleid. 419

text: mouse gut metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Jejunum

text: mouse gut metagenome

characteristic: title

text: 3D Mouse


text: UCSDMI

text: public

text: Jejunum sampleid. 420

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal proximal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: intestine environment

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:gastro-intestinal system

characteristic: host body habitat

text: UBERON:small intestinal wall

characteristic: host body product

text: UBERON:jejunum

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Jejunum sampleid. 420

text: mouse gut metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Jejunum

characteristic: sample type

text: mouse gut metagenome

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Jejunum sampleid. 421

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal proximal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: intestine environment

text: USA:CA:San Diego

text: SPF

text: UBERON:gastro-intestinal system

text: UBERON:small intestinal wall

text: UBERON:jejunum

text: mouse

text: Mus musculus

text: Jejunum sampleid. 421

text: mouse gut metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Jejunum

characteristic: samplenum

text: mouse gut metagenome

text: 3D Mouse


text: UCSDMI

text: public

text: Jejunum sampleid. 422

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal proximal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: intestine environment

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:gastro-intestinal system

characteristic: host body habitat

text: UBERON:small intestinal wall

characteristic: host body product

text: UBERON:jejunum

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Jejunum sampleid. 422

text: mouse gut metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Jejunum

text: mouse gut metagenome

characteristic: title

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Jejunum sampleid. 423

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal proximal gut

text: urban biome

text: animal-associated habitat

text: host-associated

text: intestine environment

text: USA:CA:San Diego

text: SPF

text: UBERON:gastro-intestinal system

text: UBERON:small intestinal wall

text: UBERON:jejunum

text: mouse

text: Mus musculus

text: Jejunum sampleid. 423

text: mouse gut metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Jejunum

characteristic: sample type

text: mouse gut metagenome

text: 3D Mouse


text: UCSDMI

text: public

text: Kidney sampleid. 443

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal corpus

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: bodily fluid

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:genitourinary system

characteristic: host body habitat

text: UBERON:kidney mesenchyme

characteristic: host body product

text: UBERON:kidney

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Kidney sampleid. 443

text: mouse metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Kidney

characteristic: samplenum

text: mouse metagenome

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Kidney sampleid. 444

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal corpus

text: urban biome

text: animal-associated habitat

text: host-associated

text: bodily fluid

text: USA:CA:San Diego

text: SPF

text: UBERON:genitourinary system

text: UBERON:kidney mesenchyme

text: UBERON:kidney

text: mouse

text: Mus musculus

text: Kidney sampleid. 444

text: mouse metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Kidney

text: mouse metagenome

characteristic: title

text: 3D Mouse


text: UCSDMI

text: public

text: Kidney sampleid. 445

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal corpus

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: bodily fluid

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:genitourinary system

characteristic: host body habitat

text: UBERON:kidney mesenchyme

characteristic: host body product

text: UBERON:kidney

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Kidney sampleid. 445

text: mouse metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Kidney

characteristic: sample type

text: mouse metagenome

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Kidney sampleid. 446

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal corpus

text: urban biome

text: animal-associated habitat

text: host-associated

text: bodily fluid

text: USA:CA:San Diego

text: SPF

text: UBERON:genitourinary system

text: UBERON:kidney mesenchyme

text: UBERON:kidney

text: mouse

text: Mus musculus

text: Kidney sampleid. 446

text: mouse metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Kidney

characteristic: samplenum

text: mouse metagenome

text: 3D Mouse


text: UCSDMI

text: public

text: Lung sampleid. 463

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal corpus

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: bodily fluid

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:lower respiratory tract

characteristic: host body habitat

text: UBERON:lung parenchyma

characteristic: host body product

text: UBERON:lung

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Lung sampleid. 463

text: mouse metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Lung

text: mouse metagenome

characteristic: title

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Lung sampleid. 464

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal corpus

text: urban biome

text: animal-associated habitat

text: host-associated

text: bodily fluid

text: USA:CA:San Diego

text: SPF

text: UBERON:lower respiratory tract

text: UBERON:lung parenchyma

text: UBERON:lung

text: mouse

text: Mus musculus

text: Lung sampleid. 464

text: mouse metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Lung

characteristic: sample type

text: mouse metagenome

text: 3D Mouse


text: UCSDMI

text: public

text: Lung sampleid. 465

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal corpus

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: bodily fluid

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:lower respiratory tract

characteristic: host body habitat

text: UBERON:lung parenchyma

characteristic: host body product

text: UBERON:lung

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Lung sampleid. 465

text: mouse metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Lung

characteristic: samplenum

text: mouse metagenome

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Lung sampleid. 466

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal corpus

text: urban biome

text: animal-associated habitat

text: host-associated

text: bodily fluid

text: USA:CA:San Diego

text: SPF

text: UBERON:lower respiratory tract

text: UBERON:lung parenchyma

text: UBERON:lung

text: mouse

text: Mus musculus

text: Lung sampleid. 466

text: mouse metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Lung

text: mouse metagenome

text: 3D Mouse

characteristic: title


text: UCSDMI

text: public

text: Lung sampleid. 467

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal corpus

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: bodily fluid

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:lower respiratory tract

characteristic: host body habitat

text: UBERON:lung parenchyma

characteristic: host body product

text: UBERON:lung

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Lung sampleid. 467

text: mouse metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Lung

characteristic: sample type

text: mouse metagenome

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Liver sampleid. 401

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal corpus

text: urban biome

text: animal-associated habitat

text: host-associated

text: bodily fluid

text: USA:CA:San Diego

text: SPF

text: UBERON:liver

text: UBERON:liver parenchyma

text: UBERON:liver

text: mouse

text: Mus musculus

text: Liver sampleid. 401

text: mouse metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Liver

characteristic: samplenum

text: mouse metagenome

text: 3D Mouse


text: UCSDMI

text: public

text: Liver sampleid. 402

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal corpus

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: bodily fluid

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:liver

characteristic: host body habitat

text: UBERON:liver parenchyma

characteristic: host body product

text: UBERON:liver

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Liver sampleid. 402

text: mouse metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Liver

text: mouse metagenome

characteristic: title

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Liver sampleid. 403

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal corpus

text: urban biome

text: animal-associated habitat

text: host-associated

text: bodily fluid

text: USA:CA:San Diego

text: SPF

text: UBERON:liver

text: UBERON:liver parenchyma

text: UBERON:liver

text: mouse

text: Mus musculus

text: Liver sampleid. 403

text: mouse metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Liver

characteristic: sample type

text: mouse metagenome

text: 3D Mouse


text: UCSDMI

text: public

text: Liver sampleid. 404

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal corpus

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: bodily fluid

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:liver

characteristic: host body habitat

text: UBERON:liver parenchyma

characteristic: host body product

text: UBERON:liver

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Liver sampleid. 404

text: mouse metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Liver

characteristic: samplenum

text: mouse metagenome

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Liver sampleid. 405

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal corpus

text: urban biome

text: animal-associated habitat

text: host-associated

text: bodily fluid

text: USA:CA:San Diego

text: SPF

text: UBERON:liver

text: UBERON:liver parenchyma

text: UBERON:liver

text: mouse

text: Mus musculus

text: Liver sampleid. 405

text: mouse metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Liver

text: mouse metagenome

characteristic: title

text: 3D Mouse


text: UCSDMI

text: public

text: Mouth sampleid. 395

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal secretion

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: saliva

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:oral cavity

characteristic: host body habitat

text: UBERON:saliva

characteristic: host body product

text: UBERON:mouth

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Mouth sampleid. 395

text: mouse metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Mouth

characteristic: sample type

text: mouse metagenome

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Ovary sampleid. 449

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal secretion

text: urban biome

text: animal-associated habitat

text: host-associated

text: bodily fluid

text: USA:CA:San Diego

text: SPF

text: UBERON:genitourinary system

text: UBERON:ovary

text: UBERON:ovary

text: mouse

text: Mus musculus

text: Ovary sampleid. 449

text: mouse metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Ovary

characteristic: samplenum

text: mouse metagenome

text: 3D Mouse


text: UCSDMI

text: public

text: Ovary sampleid. 450

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal secretion

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: bodily fluid

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:genitourinary system

characteristic: host body habitat

text: UBERON:ovary

characteristic: host body product

text: UBERON:ovary

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Ovary sampleid. 450

text: mouse metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Ovary

text: mouse metagenome

text: 3D Mouse

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Pancreas sampleid. 406

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal secretion

text: urban biome

text: animal-associated habitat

text: host-associated

text: bodily fluid

text: USA:CA:San Diego

text: SPF

text: UBERON:pancreas

text: UBERON:body of pancreas

text: UBERON:pancreas

text: mouse

text: Mus musculus

text: Pancreas sampleid. 406

text: mouse metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Pancreas

characteristic: sample type

text: mouse metagenome

text: 3D Mouse


text: UCSDMI

text: public

text: Pancreas sampleid. 407

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal secretion

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: bodily fluid

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:pancreas

characteristic: host body habitat

text: UBERON:body of pancreas

characteristic: host body product

text: UBERON:pancreas

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Pancreas sampleid. 407

text: mouse metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Pancreas

characteristic: samplenum

text: mouse metagenome

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Pancreas sampleid. 408

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal secretion

text: urban biome

text: animal-associated habitat

text: host-associated

text: bodily fluid

text: USA:CA:San Diego

text: SPF

text: UBERON:pancreas

text: UBERON:body of pancreas

text: UBERON:pancreas

text: mouse

text: Mus musculus

text: Pancreas sampleid. 408

text: mouse metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Pancreas

text: mouse metagenome

text: 3D Mouse

characteristic: title


text: UCSDMI

text: public

text: Stool sampleid. 385

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal distal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: feces

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:feces

characteristic: host body habitat

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Stool sampleid. 385

text: mouse gut metagenome

text: Dorrestein UCSDMI

text: TRUE

text: feces

characteristic: sample type

text: mouse gut metagenome

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Skin sampleid. 387

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal secretion

text: urban biome

text: animal-associated habitat

text: host-associated

text: sebum

text: USA:CA:San Diego

text: SPF

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin

text: mouse

text: Mus musculus

text: Skin sampleid. 387

text: mouse skin metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Skin

characteristic: samplenum

text: mouse skin metagenome

text: 3D Mouse


text: UCSDMI

text: public

text: Skin sampleid. 388

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal secretion

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: sebum

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:skin

characteristic: host body habitat

text: UBERON:sebum

characteristic: host body product

text: UBERON:skin

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Skin sampleid. 388

text: mouse skin metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Skin

text: mouse skin metagenome

text: 3D Mouse

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Spleen sampleid. 396

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal corpus

text: urban biome

text: animal-associated habitat

text: host-associated

text: bodily fluid

text: USA:CA:San Diego

text: SPF

text: UBERON:spleen

text: UBERON:parenchyma of spleen

text: UBERON:spleen

text: mouse

text: Mus musculus

text: Spleen sampleid. 396

text: mouse metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Spleen

characteristic: sample type

text: mouse metagenome

text: 3D Mouse


text: UCSDMI

text: public

text: Spleen sampleid. 397

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal corpus

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: bodily fluid

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:spleen

characteristic: host body habitat

text: UBERON:parenchyma of spleen

characteristic: host body product

text: UBERON:spleen

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Spleen sampleid. 397

text: mouse metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Spleen

characteristic: samplenum

text: mouse metagenome

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Spleen sampleid. 398

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal corpus

text: urban biome

text: animal-associated habitat

text: host-associated

text: bodily fluid

text: USA:CA:San Diego

text: SPF

text: UBERON:spleen

text: UBERON:parenchyma of spleen

text: UBERON:spleen

text: mouse

text: Mus musculus

text: Spleen sampleid. 398

text: mouse metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Spleen

text: mouse metagenome

characteristic: title

text: 3D Mouse


text: UCSDMI

text: public

text: Spleen sampleid. 399

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal corpus

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: bodily fluid

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:spleen

characteristic: host body habitat

text: UBERON:parenchyma of spleen

characteristic: host body product

text: UBERON:spleen

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Spleen sampleid. 399

text: mouse metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Spleen

characteristic: sample type

text: mouse metagenome

text: 3D Mouse


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: Stomach sampleid. 409

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal corpus

text: urban biome

text: animal-associated habitat

text: host-associated

text: intestine environment

text: USA:CA:San Diego

text: SPF

text: UBERON:gastro-intestinal system

text: UBERON:wall of stomach

text: UBERON:stomach

text: mouse

text: Mus musculus

text: Stomach sampleid. 409

text: mouse gut metagenome

characteristic: organism

text: Dorrestein UCSDMI

text: TRUE

text: Stomach

characteristic: samplenum

text: mouse gut metagenome

text: 3D Mouse


text: UCSDMI

text: public

text: Stomach sampleid. 410

text: TRUE

text: Host-associated

text: Animal-associated

text: Animal proximal gut

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: intestine environment

text: USA:CA:San Diego

characteristic: geo loc name

text: SPF

characteristic: gfspf

text: UBERON:gastro-intestinal system

characteristic: host body habitat

text: UBERON:wall of stomach

characteristic: host body product

text: UBERON:stomach

characteristic: host body site

text: mouse

characteristic: host common name

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

characteristic: latitude

characteristic: longitude

text: Stomach sampleid. 410

text: mouse gut metagenome

text: Dorrestein UCSDMI

text: TRUE

text: Stomach

text: mouse gut metagenome

characteristic: title

text: 3D Mouse