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text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba4a6cd/2021

characteristic: isolate

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: SIB

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: ZH

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba4a7bc/2021


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: Switzerland

text: ZH

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba4a7bd/2021

text: Severe acute respiratory syndrome coronavirus 2


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Switzerland

text: ZH

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba4a8ed/2021

characteristic: isolate

characteristic: organism

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

text: Buergerspital Solothurn, Solothurn, Switzerland

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: SO

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

text: hCoV-19/Switzerland/SO-UZH-IMV-3ba4a929/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: Medica, Medizinische Laboratorien, Zürich, Switzerland

text: Switzerland

text: ZH

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba4a989/2021


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

characteristic: broker name

text: UniversitätsSpital Zürich, Zürich, Switzerland

characteristic: collecting institution

characteristic: collection date

text: Switzerland

text: ZH

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba4aa16/2021

characteristic: isolate

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: SIB

text: Universitätsspital Zürich 046, Zürich, Switzerland

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: ZH

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-457ca642/2021


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: Switzerland

text: ZH

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba4a074/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Institute of Medical Virology, Zürich, Switzerland

text: public

text: SIB

characteristic: broker name

text: Spital Limmattal, Schlieren, Switzerland

characteristic: collecting institution

characteristic: collection date

text: Switzerland

text: ZH

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba4a07f/2021

characteristic: isolate

characteristic: organism

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

text: Spital Männedorf AG, Männedorf, Switzerland

text: Verena Kufner, Gabriela Ziltener, Maryam Zaheri, Stefan Schmutz, Annette Audigé, Maria Grünberg, Kevin Steiner, Jon Huder, Cyril Shah, Riccarda Capaul, Guido Bloemberg, Jürg Böni, Michael Huber, Alexandra Trkola

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: ZH

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba4a08f/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: Switzerland

text: ZH

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba4a14c/2021

text: Severe acute respiratory syndrome coronavirus 2


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Switzerland

text: ZH

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba4a150/2021

characteristic: isolate

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: SIB

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: AG

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

text: hCoV-19/Switzerland/AG-UZH-IMV-3ba4a153/2021


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: Switzerland

text: ZH

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba4a11f/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Switzerland

text: ZH

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba4a13f/2021

characteristic: isolate

characteristic: organism

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: ZH

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba4a140/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: Switzerland

text: ZH

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba4a1ae/2021


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CHRISTIAN MEDICAL COLLEGE

text: public

tag: Namespace:CHRISTIAN MEDICAL COLLEGE

characteristic: collection date

text: Genome sequencing of A. baumannii

characteristic: description

text: India

text: Homo sapiens

characteristic: isolate

text: Blood

characteristic: isolation source

text: Acinetobacter baumannii

characteristic: organism

text: Acinetobacter baumannii

text: Surveillance of Acinetobacter baumannii in India

characteristic: title


characteristic: ENA-CHECKLIST

text: CHRISTIAN MEDICAL COLLEGE

text: public

text: Genome sequencing of A. baumannii

text: India

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: host scientific name

text: Endotracheal Aspirate

text: Acinetobacter baumannii

text: Acinetobacter baumannii


E-MTAB-10615:Sample 1

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

text: public

text: E-MTAB-10615:Sample 1

tag: Namespace:Department of Immunology, Genetics and Pathology, Uppsala University, Sweden

unit: year

characteristic: age

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: glial brain cell

characteristic: cell type

text: human

characteristic: common name

text: Protocols: Four days before the time series start point, 8*10^5 passage 6 U3065MG cells were infected with the BFP expressing Perturbseq lentivirus at a MOI of < 0.1. Cells were incubated with the lentivirus as a single cell suspension in 20 µl of media for 4 hours at 37°C and seeded onto a laminin coated 60 mm dish. The next day, virus containing media was replaced with fresh media.At experimental day 0, 2500 BFP positive U3065 cells were sorted into one well on a 96 well plate coated with laminin. Cells were allowed to grow under stem cell conditions, and culture media was changed at day 3, 10 and 17. At experimental day 7 and 14, all cells were detached and 80% of the cells frozen down in media with 10% DMSO in -150°C, while the remaining 20% were seeded into a new well. After 21 days at the experimental endpoint, all cells were frozen down. Cells were washed in 0.1% BSA in PBS before library preparation with the Chromium Single Cell 3’ GEM, Library & Gel Bead Kit v3 according to the manufacturer’s instructions. Chromium Single Cell 3’ GEM, Library & Gel Bead Kit v3.

text: adult

characteristic: developmental stage

text: glioblastoma multiforme

characteristic: disease

text: BFP expressing lentivirus

characteristic: genotype

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: brain

characteristic: organism part

text: Homo sapiens

text: male

characteristic: sex

text: Sample 1


E-MTAB-10615:Sample 2

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Department of Immunology, Genetics and Pathology, Uppsala University, Sweden

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10615:Sample 2

characteristic: Submitter Id

text: ArrayExpress

text: glial brain cell

text: human

characteristic: description

text: adult

text: glioblastoma multiforme

text: BFP expressing lentivirus

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: brain

text: Homo sapiens

text: male

text: Sample 2

characteristic: title


E-MTAB-10615:Sample 3

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

text: public

text: E-MTAB-10615:Sample 3

characteristic: age

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: glial brain cell

characteristic: cell type

text: human

characteristic: common name

text: adult

text: glioblastoma multiforme

text: BFP expressing lentivirus

text: Homo sapiens

text: Homo sapiens

text: brain

text: Homo sapiens

text: male

text: Sample 3


E-MTAB-10615:Sample 4

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-10615:Sample 4

text: ArrayExpress

text: glial brain cell

text: human

text: adult

characteristic: developmental stage

text: glioblastoma multiforme

characteristic: disease

text: BFP expressing lentivirus

characteristic: genotype

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: brain

characteristic: organism part

text: Homo sapiens

text: male

characteristic: sex

text: Sample 4


E-MTAB-10615:Sample 5

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10615:Sample 5

characteristic: Submitter Id

text: ArrayExpress

text: glial brain cell

text: human

characteristic: description

text: adult

text: glioblastoma multiforme

text: BFP expressing lentivirus

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: brain

text: Homo sapiens

text: male

text: Sample 5

characteristic: title


E-MTAB-10615:Sample 6

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

text: public

text: E-MTAB-10615:Sample 6

characteristic: age

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: glial brain cell

characteristic: cell type

text: human

characteristic: common name

text: adult

text: glioblastoma multiforme

text: BFP expressing lentivirus

text: Homo sapiens

text: Homo sapiens

text: brain

text: Homo sapiens

text: male

text: Sample 6


E-MTAB-10615:Sample 7

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-10615:Sample 7

text: ArrayExpress

text: glial brain cell

text: human

text: adult

characteristic: developmental stage

text: glioblastoma multiforme

characteristic: disease

text: BFP expressing lentivirus

characteristic: genotype

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: brain

characteristic: organism part

text: Homo sapiens

text: male

characteristic: sex

text: Sample 7


E-MTAB-10615:Sample 8

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10615:Sample 8

characteristic: Submitter Id

text: ArrayExpress

text: glial brain cell

text: human

characteristic: description

text: adult

text: glioblastoma multiforme

text: BFP expressing lentivirus

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: brain

text: Homo sapiens

text: male

text: Sample 8

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

text: public

tag: Namespace:General medical oncology, University Hospitals Leuven

characteristic: age

characteristic: age at diagnosis

text: yes

characteristic: alive at endpoint

text: ArrayExpress

characteristic: broker name

characteristic: ccRCC transcriptomic subtype

text: IMDC risk score intermediate

characteristic: clinical information

text: sunitinib

characteristic: clinical treatment

text: human

characteristic: common name

text: Protocols: We selected primary ccRCC samples from the Leuven University Hospitals ccRCC tumor bank, which prospectively collects tissue and detailed clinical data from metastatic ccRCC patients after informed consent. Patients were eligible if archived tissue of the primary tumor was available, provided they had not received systemic therapy prior to tissue retrieval. Clear-cell histology was confirmed by an expert uro-pathologist. As a reference, we included paired normal kidney samples from 16 patients as well (healthy tissue block from the nephrectomy specimen removed during ccRCC surgery). H&E-stained sections of the tumor sample were examined by a pathologist to confirm the diagnosis and to estimate tumor content. In the discovery series, tumor content was above 90% in 71 cases and was 70% in 3 cases. Formallin-fixed paraffin-embedded samples were trimmend and dissected in 10µl sections, of which 4-6 whole 10-μm sections were used for RNA extraction. Batch 2014: RNA samples were extracted with the \RecoverAll Total Nucleic Acid Isolation Kit for FFPE\ (Ambion). Sample RNA Integrity Numbers were in the range 1.7 to 2.5 when assayed on an Agilent 2100 Bioanalyzer. Batch 2017: RNA samples were extracted with the \RecoverAll Total Nucleic Acid Isolation Kit for FFPE\ (Ambion). Sample RNA Integrity Numbers were less than 3 when assayed on an Agilent 2100 Bioanalyzer Batch 2014: Sample amounts used ranged between 200 and 500ng of total RNA. They were processed with kit \NEBNext Multiplex Small RNA Library Prep Set for Illumina\ (NEB part # E7300 v2.1) by following manufacturer instructions. Briefly, samples were sequentially ligated to 3' and 5' adapters, with the truncated form of T4 RNA Ligase 2 and the T4 RNA ligase 1, respectively. Reverse transcription with ProtoScript II Reverse Transcriptase yielded cDNA adapter-ligated libraries that were amplified by PCR with LongAmp Taq DNA polymerase mix (12 cycles). Amplified barcoded cDNA from different samples was pooled, and a polyacrylamide gel electrophoresis fraction of 140 to 150 bases -expected to include both miRNA and piRNA libraries- was extracted. Batch 2017: 1000ng of total RNA per sample was processed with kit \NEBNext Multiplex Small RNA Library Prep Set for Illumina\ (NEB E7300) by following manufacturer instructions. Briefly, samples were sequentially ligated to 3' and 5' adapters, with the truncated form of T4 RNA Ligase 2 and the T4 RNA ligase 1, respectively. Reverse transcription with ProtoScript II Reverse Transcriptase yielded cDNA adapter-ligated libraries that were amplified by PCR with LongAmp Taq DNA polymerase mix (15 cycles). Amplified barcoded cDNA from different samples was pooled, and a polyacrylamide gel electrophoresis fraction of 140 to 150 bases -expected to include both miRNA and piRNA libraries- was extracted.

text: adult

text: clear cell renal carcinoma

text: no or censored

characteristic: disease progression at data cutoff

characteristic: mirnaseq date

text: Homo sapiens

text: Homo sapiens

text: kidney

unit: month

characteristic: progression free survival

characteristic: related experiment E-MTAB-10592 source name

text: neoplasm

characteristic: sampling site

text: Homo sapiens

text: male

text: FFPE specimen

characteristic: specimen with known storage state

characteristic: survival time

characteristic: tumor shrinkage (according to recist v1.1)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: General medical oncology, University Hospitals Leuven

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: no or censored

text: ArrayExpress

text: IMDC risk score good

text: sunitinib

text: human

characteristic: description

text: adult

characteristic: developmental stage

text: clear cell renal carcinoma

characteristic: disease

text: yes

characteristic: individual

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: kidney

characteristic: organism part

text: neoplasm

text: Homo sapiens

text: male

characteristic: sex

text: FFPE specimen

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

characteristic: age

characteristic: age at diagnosis

text: yes

characteristic: alive at endpoint

text: ArrayExpress

characteristic: broker name

characteristic: ccRCC transcriptomic subtype

text: IMDC risk score intermediate

characteristic: clinical information

text: sunitinib

characteristic: clinical treatment

text: human

characteristic: common name

text: adult

text: clear cell renal carcinoma

text: yes

characteristic: disease progression at data cutoff

characteristic: mirnaseq date

text: Homo sapiens

text: Homo sapiens

text: kidney

characteristic: progression free survival

characteristic: related experiment E-MTAB-10592 source name

text: neoplasm

characteristic: sampling site

text: Homo sapiens

text: male

text: FFPE specimen

characteristic: specimen with known storage state

characteristic: survival time

characteristic: tumor shrinkage (according to recist v1.1)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: no or censored

text: ArrayExpress

text: IMDC risk score good

text: pazopanib

text: human

characteristic: description

text: adult

characteristic: developmental stage

text: clear cell renal carcinoma

characteristic: disease

text: no or censored

characteristic: individual

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: kidney

characteristic: organism part

text: neoplasm

text: Homo sapiens

text: male

characteristic: sex

text: FFPE specimen

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

characteristic: age

characteristic: age at diagnosis

text: no or censored

characteristic: alive at endpoint

text: ArrayExpress

characteristic: broker name

characteristic: ccRCC transcriptomic subtype

text: IMDC risk score intermediate

characteristic: clinical information

text: pazopanib

characteristic: clinical treatment

text: human

characteristic: common name

text: adult

text: clear cell renal carcinoma

text: yes

characteristic: disease progression at data cutoff

characteristic: mirnaseq date

text: Homo sapiens

text: Homo sapiens

text: kidney

characteristic: progression free survival

characteristic: related experiment E-MTAB-10592 source name

text: neoplasm

characteristic: sampling site

text: Homo sapiens

text: male

text: FFPE specimen

characteristic: specimen with known storage state

characteristic: survival time

characteristic: tumor shrinkage (according to recist v1.1)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: yes

text: ArrayExpress

text: IMDC risk score intermediate

text: sunitinib

text: human

characteristic: description

text: adult

characteristic: developmental stage

text: clear cell renal carcinoma

characteristic: disease

text: yes

characteristic: individual

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: kidney

characteristic: organism part

text: neoplasm

text: Homo sapiens

text: male

characteristic: sex

text: FFPE specimen

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

characteristic: age

characteristic: age at diagnosis

text: yes

characteristic: alive at endpoint

text: ArrayExpress

characteristic: broker name

text: IMDC risk score intermediate

characteristic: clinical information

text: pazopanib

characteristic: clinical treatment

text: human

characteristic: common name

text: adult

text: clear cell renal carcinoma

text: no or censored

characteristic: disease progression at data cutoff

characteristic: mirnaseq date

text: Homo sapiens

text: Homo sapiens

text: kidney

characteristic: progression free survival

text: neoplasm

characteristic: sampling site

text: Homo sapiens

text: female

text: FFPE specimen

characteristic: specimen with known storage state

characteristic: survival time

characteristic: tumor shrinkage (according to recist v1.1)


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: yes

text: ArrayExpress

characteristic: ccRCC transcriptomic subtype

text: IMDC risk score poor

text: sunitinib

text: human

characteristic: description

text: adult

characteristic: developmental stage

text: clear cell renal carcinoma

characteristic: disease

text: yes

characteristic: individual

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: kidney

characteristic: organism part

characteristic: related experiment E-MTAB-10592 source name

text: neoplasm

text: Homo sapiens

text: female

characteristic: sex

text: FFPE specimen

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: age

characteristic: age at diagnosis

text: yes

characteristic: alive at endpoint

text: ArrayExpress

characteristic: broker name

text: IMDC risk score poor

characteristic: clinical information

text: sunitinib

characteristic: clinical treatment

text: human

characteristic: common name

text: adult

text: clear cell renal carcinoma

text: no or censored

characteristic: disease progression at data cutoff

characteristic: mirnaseq date

text: Homo sapiens

text: Homo sapiens

text: kidney

characteristic: progression free survival

text: neoplasm

characteristic: sampling site

text: Homo sapiens

text: male

text: FFPE specimen

characteristic: specimen with known storage state

characteristic: survival time

characteristic: tumor shrinkage (according to recist v1.1)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

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