characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RADBOUD UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: aluminium porewater (see porewater sampling depth) (µmol/l)

characteristic: ammonium porewater (see porewater sampling depth) (µmol/l)

characteristic: bacterial 16s gene copy number (copies)

characteristic: calcium porewater (see porewater sampling depth) (µmol/l)

characteristic: carbon/nitrogen ratio

characteristic: chlorophyll a (µg/l)

characteristic: collection date

characteristic: conductivity (ms/m)

text: Sample from AU Lake Mesocosm Warming Experiment (LMWE) in Lemming, Denmark, of mesocosm A2 of top 4 cm of sediment, sampled on 15 June 2020, one year after resuming nitrogen fertilization, sequencing the bacterial 16S rRNA gene V3-V4 region

characteristic: description

characteristic: diffusive carbon dioxide emissions (mg/m2/d)

characteristic: diffusive methane emissions (mg/m2/d)

characteristic: diffusive nitrous oxide emissions (mg/m2/d)

characteristic: elodea cover (%)

characteristic: elodea volume inhabited (%)

text: Shallow lake

characteristic: environment (biome)

text: Sediment top 4 cm

characteristic: environment (feature)

text: Sediment

characteristic: environment (material)

characteristic: filamentous algae volume inhabited (%)

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: iron porewater (see porewater sampling depth) (µmol/l)

characteristic: magnesium porewater (see porewater sampling depth) (µmol/l)

characteristic: manganese porewater (see porewater sampling depth) (µmol/l)

characteristic: mcra copy number (copies)

characteristic: mesocosm

characteristic: methane oxidation potential (µmol/h/g)

characteristic: methane porewater (see porewater sampling depth) (mmol/l)

characteristic: nitrate porewater (see porewater sampling depth) (µmol/l)

text: High

characteristic: nutrient treatment

text: metagenome

characteristic: organism

characteristic: p-olsen top 4 cm sediment (µmol/g)

characteristic: pcr primers

characteristic: ph

text: MOB-Warming-NitrogenFertilization-ShallowLakes

characteristic: project name

text: metagenome

text: sediment

characteristic: sediment environmental package

text: Novaseq 6000

text: LMWE sediment mesocosm A2 bacterial 16S in week 52


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RADBOUD UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:RADBOUD UNIVERSITY

characteristic: Submitter Id

characteristic: aluminium porewater (see porewater sampling depth) (µmol/l)

characteristic: ammonium porewater (see porewater sampling depth) (µmol/l)

characteristic: bacterial 16s gene copy number (copies)

characteristic: calcium porewater (see porewater sampling depth) (µmol/l)

characteristic: carbon/nitrogen ratio

characteristic: chlorophyll a (µg/l)

characteristic: collection date

characteristic: conductivity (ms/m)

text: Sample from AU Lake Mesocosm Warming Experiment (LMWE) in Lemming, Denmark, of mesocosm A3 of top 4 cm of sediment, sampled on 15 June 2020, one year after resuming nitrogen fertilization, sequencing the bacterial 16S rRNA gene V3-V4 region

characteristic: description

characteristic: diffusive carbon dioxide emissions (mg/m2/d)

characteristic: diffusive methane emissions (mg/m2/d)

characteristic: diffusive nitrous oxide emissions (mg/m2/d)

characteristic: elodea cover (%)

characteristic: elodea volume inhabited (%)

text: Shallow lake

characteristic: environment (biome)

text: Sediment top 4 cm

characteristic: environment (feature)

text: Sediment

characteristic: environment (material)

characteristic: filamentous algae volume inhabited (%)

text: Denmark

characteristic: geographic location (country and/or sea)

unit: m

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

unit: DD

characteristic: geographic location (latitude)

text: metagenome

characteristic: investigation type

characteristic: iron surface water (mg/l)

characteristic: nitrate/nitrite surface water (mg/l)

text: High

text: metagenome

text: 341F (CCTAYGGGRBGCASCAG) and 806R (GGACTACNNGGGTATCTAAT)

characteristic: phosphate porewater (see porewater sampling depth) (µmol/l)

characteristic: phosphate surface water (mg/l)

characteristic: pmoa gene copy number (copies)

characteristic: porewater sampling depth (cm)

characteristic: potamogeton cover (%)

characteristic: potamogeton volume inhabited (%)

characteristic: potassium porewater (see porewater sampling depth) (µmol/l)

text: metagenome

text: sediment

text: Novaseq 6000

characteristic: silicate porewater (see porewater sampling depth) (µmol/l)

characteristic: sodium porewater (see porewater sampling depth) (µmol/l)

characteristic: sulphur porewater (see porewater sampling depth) (µmol/l)

text: LMWE sediment mesocosm A3 bacterial 16S in week 52

characteristic: total phosporus porewater (see porewater sampling depth) (µmol/l)

characteristic: week relative to resuming nitrogen fertilization

characteristic: zink porewater (see porewater sampling depth) (µmol/l)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RADBOUD UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: aluminium porewater (see porewater sampling depth) (µmol/l)

characteristic: ammonium porewater (see porewater sampling depth) (µmol/l)

characteristic: bacterial 16s gene copy number (copies)

characteristic: calcium porewater (see porewater sampling depth) (µmol/l)

characteristic: carbon/nitrogen ratio

characteristic: chlorophyll a (µg/l)

characteristic: collection date

characteristic: conductivity (ms/m)

text: Sample from AU Lake Mesocosm Warming Experiment (LMWE) in Lemming, Denmark, of mesocosm B1 of top 4 cm of sediment, sampled on 15 June 2020, one year after resuming nitrogen fertilization, sequencing the bacterial 16S rRNA gene V3-V4 region

characteristic: description

characteristic: diffusive carbon dioxide emissions (mg/m2/d)

characteristic: diffusive methane emissions (mg/m2/d)

characteristic: diffusive nitrous oxide emissions (mg/m2/d)

characteristic: elodea cover (%)

characteristic: elodea volume inhabited (%)

text: Shallow lake

characteristic: environment (biome)

text: Sediment top 4 cm

characteristic: environment (feature)

text: Sediment

characteristic: environment (material)

characteristic: filamentous algae volume inhabited (%)

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: iron porewater (see porewater sampling depth) (µmol/l)

characteristic: magnesium porewater (see porewater sampling depth) (µmol/l)

characteristic: manganese porewater (see porewater sampling depth) (µmol/l)

characteristic: mcra copy number (copies)

characteristic: mesocosm

characteristic: methane oxidation potential (µmol/h/g)

characteristic: methane porewater (see porewater sampling depth) (mmol/l)

characteristic: nitrate porewater (see porewater sampling depth) (µmol/l)

text: Low

characteristic: nutrient treatment

text: metagenome

characteristic: organism

characteristic: p-olsen top 4 cm sediment (µmol/g)

characteristic: pcr primers

characteristic: ph

characteristic: project name

text: metagenome

text: sediment

characteristic: sediment environmental package

text: Novaseq 6000

text: Ambient

text: LMWE sediment mesocosm B1 bacterial 16S in week 52


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RADBOUD UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: aluminium porewater (see porewater sampling depth) (µmol/l)

characteristic: ammonium porewater (see porewater sampling depth) (µmol/l)

characteristic: bacterial 16s gene copy number (copies)

characteristic: calcium porewater (see porewater sampling depth) (µmol/l)

characteristic: carbon/nitrogen ratio

characteristic: chlorophyll a (µg/l)

characteristic: collection date

characteristic: conductivity (ms/m)

text: Sample from AU Lake Mesocosm Warming Experiment (LMWE) in Lemming, Denmark, of mesocosm B2 of top 4 cm of sediment, sampled on 15 June 2020, one year after resuming nitrogen fertilization, sequencing the bacterial 16S rRNA gene V3-V4 region

characteristic: description

characteristic: diffusive carbon dioxide emissions (mg/m2/d)

characteristic: diffusive methane emissions (mg/m2/d)

characteristic: diffusive nitrous oxide emissions (mg/m2/d)

characteristic: elodea cover (%)

characteristic: elodea volume inhabited (%)

text: Shallow lake

characteristic: environment (biome)

text: Sediment top 4 cm

characteristic: environment (feature)

text: Sediment

characteristic: environment (material)

characteristic: filamentous algae volume inhabited (%)

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

text: metagenome

characteristic: investigation type

characteristic: iron surface water (mg/l)

characteristic: nitrate/nitrite surface water (mg/l)

text: Low

text: metagenome

characteristic: phosphate porewater (see porewater sampling depth) (µmol/l)

characteristic: phosphate surface water (mg/l)

characteristic: pmoa gene copy number (copies)

characteristic: porewater sampling depth (cm)

characteristic: potamogeton cover (%)

characteristic: potamogeton volume inhabited (%)

characteristic: potassium porewater (see porewater sampling depth) (µmol/l)

text: metagenome

text: sediment

text: Novaseq 6000

characteristic: silicate porewater (see porewater sampling depth) (µmol/l)

characteristic: sodium porewater (see porewater sampling depth) (µmol/l)

characteristic: sulphur porewater (see porewater sampling depth) (µmol/l)

text: LMWE sediment mesocosm B2 bacterial 16S in week 52

characteristic: total phosporus porewater (see porewater sampling depth) (µmol/l)

characteristic: week relative to resuming nitrogen fertilization

characteristic: zink porewater (see porewater sampling depth) (µmol/l)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RADBOUD UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: aluminium porewater (see porewater sampling depth) (µmol/l)

characteristic: ammonium porewater (see porewater sampling depth) (µmol/l)

characteristic: bacterial 16s gene copy number (copies)

characteristic: calcium porewater (see porewater sampling depth) (µmol/l)

characteristic: carbon/nitrogen ratio

characteristic: chlorophyll a (µg/l)

characteristic: collection date

characteristic: conductivity (ms/m)

text: Sample from AU Lake Mesocosm Warming Experiment (LMWE) in Lemming, Denmark, of mesocosm B3 of top 4 cm of sediment, sampled on 15 June 2020, one year after resuming nitrogen fertilization, sequencing the bacterial 16S rRNA gene V3-V4 region

characteristic: description

characteristic: diffusive carbon dioxide emissions (mg/m2/d)

characteristic: diffusive methane emissions (mg/m2/d)

characteristic: diffusive nitrous oxide emissions (mg/m2/d)

characteristic: elodea cover (%)

characteristic: elodea volume inhabited (%)

text: Shallow lake

characteristic: environment (biome)

text: Sediment top 4 cm

characteristic: environment (feature)

text: Sediment

characteristic: environment (material)

characteristic: filamentous algae volume inhabited (%)

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: iron porewater (see porewater sampling depth) (µmol/l)

characteristic: magnesium porewater (see porewater sampling depth) (µmol/l)

characteristic: manganese porewater (see porewater sampling depth) (µmol/l)

characteristic: mcra copy number (copies)

characteristic: mesocosm

characteristic: methane oxidation potential (µmol/h/g)

characteristic: methane porewater (see porewater sampling depth) (mmol/l)

characteristic: nitrate porewater (see porewater sampling depth) (µmol/l)

text: Low

characteristic: nutrient treatment

text: metagenome

characteristic: organism

characteristic: p-olsen top 4 cm sediment (µmol/g)

characteristic: pcr primers

characteristic: ph

characteristic: project name

text: metagenome

text: sediment

characteristic: sediment environmental package

text: Novaseq 6000

text: LMWE sediment mesocosm B3 bacterial 16S in week 52


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RADBOUD UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: aluminium porewater (see porewater sampling depth) (µmol/l)

characteristic: ammonium porewater (see porewater sampling depth) (µmol/l)

characteristic: bacterial 16s gene copy number (copies)

characteristic: calcium porewater (see porewater sampling depth) (µmol/l)

characteristic: carbon/nitrogen ratio

characteristic: chlorophyll a (µg/l)

characteristic: collection date

characteristic: conductivity (ms/m)

text: Sample from AU Lake Mesocosm Warming Experiment (LMWE) in Lemming, Denmark, of mesocosm C1 of top 4 cm of sediment, sampled on 15 June 2020, one year after resuming nitrogen fertilization, sequencing the bacterial 16S rRNA gene V3-V4 region

characteristic: description

characteristic: diffusive carbon dioxide emissions (mg/m2/d)

characteristic: diffusive methane emissions (mg/m2/d)

characteristic: diffusive nitrous oxide emissions (mg/m2/d)

characteristic: elodea cover (%)

characteristic: elodea volume inhabited (%)

text: Shallow lake

characteristic: environment (biome)

text: Sediment top 4 cm

characteristic: environment (feature)

text: Sediment

characteristic: environment (material)

characteristic: filamentous algae volume inhabited (%)

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

text: metagenome

characteristic: investigation type

characteristic: iron surface water (mg/l)

characteristic: nitrate/nitrite surface water (mg/l)

text: Low

text: metagenome

characteristic: phosphate porewater (see porewater sampling depth) (µmol/l)

characteristic: phosphate surface water (mg/l)

characteristic: pmoa gene copy number (copies)

characteristic: porewater sampling depth (cm)

characteristic: potamogeton cover (%)

characteristic: potamogeton volume inhabited (%)

characteristic: potassium porewater (see porewater sampling depth) (µmol/l)

text: metagenome

text: sediment

text: Novaseq 6000

characteristic: silicate porewater (see porewater sampling depth) (µmol/l)

characteristic: sodium porewater (see porewater sampling depth) (µmol/l)

characteristic: sulphur porewater (see porewater sampling depth) (µmol/l)

text: Ambient

text: LMWE sediment mesocosm C1 bacterial 16S in week 52

characteristic: total phosporus porewater (see porewater sampling depth) (µmol/l)

characteristic: week relative to resuming nitrogen fertilization

characteristic: zink porewater (see porewater sampling depth) (µmol/l)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RADBOUD UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: aluminium porewater (see porewater sampling depth) (µmol/l)

characteristic: ammonium porewater (see porewater sampling depth) (µmol/l)

characteristic: bacterial 16s gene copy number (copies)

characteristic: calcium porewater (see porewater sampling depth) (µmol/l)

characteristic: carbon/nitrogen ratio

characteristic: chlorophyll a (µg/l)

characteristic: collection date

characteristic: conductivity (ms/m)

text: Sample from AU Lake Mesocosm Warming Experiment (LMWE) in Lemming, Denmark, of mesocosm C2 of top 4 cm of sediment, sampled on 15 June 2020, one year after resuming nitrogen fertilization, sequencing the bacterial 16S rRNA gene V3-V4 region

characteristic: description

characteristic: diffusive carbon dioxide emissions (mg/m2/d)

characteristic: diffusive methane emissions (mg/m2/d)

characteristic: diffusive nitrous oxide emissions (mg/m2/d)

characteristic: elodea cover (%)

characteristic: elodea volume inhabited (%)

text: Shallow lake

characteristic: environment (biome)

text: Sediment top 4 cm

characteristic: environment (feature)

text: Sediment

characteristic: environment (material)

characteristic: filamentous algae volume inhabited (%)

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: iron porewater (see porewater sampling depth) (µmol/l)

characteristic: magnesium porewater (see porewater sampling depth) (µmol/l)

characteristic: manganese porewater (see porewater sampling depth) (µmol/l)

characteristic: mcra copy number (copies)

characteristic: mesocosm

characteristic: methane oxidation potential (µmol/h/g)

characteristic: methane porewater (see porewater sampling depth) (mmol/l)

characteristic: nitrate porewater (see porewater sampling depth) (µmol/l)

text: Low

characteristic: nutrient treatment

text: metagenome

characteristic: organism

characteristic: p-olsen top 4 cm sediment (µmol/g)

characteristic: pcr primers

characteristic: ph

characteristic: project name

text: metagenome

text: sediment

characteristic: sediment environmental package

text: Novaseq 6000

text: LMWE sediment mesocosm C2 bacterial 16S in week 52


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RADBOUD UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: aluminium porewater (see porewater sampling depth) (µmol/l)

characteristic: ammonium porewater (see porewater sampling depth) (µmol/l)

characteristic: bacterial 16s gene copy number (copies)

characteristic: calcium porewater (see porewater sampling depth) (µmol/l)

characteristic: carbon/nitrogen ratio

characteristic: chlorophyll a (µg/l)

characteristic: collection date

characteristic: conductivity (ms/m)

text: Sample from AU Lake Mesocosm Warming Experiment (LMWE) in Lemming, Denmark, of mesocosm C3 of top 4 cm of sediment, sampled on 15 June 2020, one year after resuming nitrogen fertilization, sequencing the bacterial 16S rRNA gene V3-V4 region

characteristic: description

characteristic: diffusive carbon dioxide emissions (mg/m2/d)

characteristic: diffusive methane emissions (mg/m2/d)

characteristic: diffusive nitrous oxide emissions (mg/m2/d)

characteristic: elodea cover (%)

characteristic: elodea volume inhabited (%)

text: Shallow lake

characteristic: environment (biome)

text: Sediment top 4 cm

characteristic: environment (feature)

text: Sediment

characteristic: environment (material)

characteristic: filamentous algae volume inhabited (%)

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

text: metagenome

characteristic: investigation type

characteristic: iron surface water (mg/l)

characteristic: nitrate/nitrite surface water (mg/l)

text: Low

text: metagenome

characteristic: phosphate porewater (see porewater sampling depth) (µmol/l)

characteristic: phosphate surface water (mg/l)

characteristic: pmoa gene copy number (copies)

characteristic: porewater sampling depth (cm)

characteristic: potamogeton cover (%)

characteristic: potamogeton volume inhabited (%)

characteristic: potassium porewater (see porewater sampling depth) (µmol/l)

text: metagenome

text: sediment

text: Novaseq 6000

characteristic: silicate porewater (see porewater sampling depth) (µmol/l)

characteristic: sodium porewater (see porewater sampling depth) (µmol/l)

characteristic: sulphur porewater (see porewater sampling depth) (µmol/l)

text: LMWE sediment mesocosm C3 bacterial 16S in week 52

characteristic: total phosporus porewater (see porewater sampling depth) (µmol/l)

characteristic: week relative to resuming nitrogen fertilization

characteristic: zink porewater (see porewater sampling depth) (µmol/l)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RADBOUD UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: aluminium porewater (see porewater sampling depth) (µmol/l)

characteristic: ammonium porewater (see porewater sampling depth) (µmol/l)

characteristic: bacterial 16s gene copy number (copies)

characteristic: calcium porewater (see porewater sampling depth) (µmol/l)

characteristic: carbon/nitrogen ratio

characteristic: chlorophyll a (µg/l)

characteristic: collection date

characteristic: conductivity (ms/m)

text: Sample from AU Lake Mesocosm Warming Experiment (LMWE) in Lemming, Denmark, of mesocosm D1 of top 4 cm of sediment, sampled on 15 June 2020, one year after resuming nitrogen fertilization, sequencing the bacterial 16S rRNA gene V3-V4 region

characteristic: description

characteristic: diffusive carbon dioxide emissions (mg/m2/d)

characteristic: diffusive methane emissions (mg/m2/d)

characteristic: diffusive nitrous oxide emissions (mg/m2/d)

characteristic: elodea cover (%)

characteristic: elodea volume inhabited (%)

text: Shallow lake

characteristic: environment (biome)

text: Sediment top 4 cm

characteristic: environment (feature)

text: Sediment

characteristic: environment (material)

characteristic: filamentous algae volume inhabited (%)

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: iron porewater (see porewater sampling depth) (µmol/l)

characteristic: magnesium porewater (see porewater sampling depth) (µmol/l)

characteristic: manganese porewater (see porewater sampling depth) (µmol/l)

characteristic: mcra copy number (copies)

characteristic: mesocosm

characteristic: methane oxidation potential (µmol/h/g)

characteristic: methane porewater (see porewater sampling depth) (mmol/l)

characteristic: nitrate porewater (see porewater sampling depth) (µmol/l)

text: High

characteristic: nutrient treatment

text: metagenome

characteristic: organism

characteristic: p-olsen top 4 cm sediment (µmol/g)

characteristic: pcr primers

characteristic: ph

text: MOB-Warming-NitrogenFertilization-ShallowLakes

characteristic: project name

text: metagenome

text: sediment

characteristic: sediment environmental package

text: Novaseq 6000

text: Ambient

text: LMWE sediment mesocosm D1 bacterial 16S in week 52


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RADBOUD UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: aluminium porewater (see porewater sampling depth) (µmol/l)

characteristic: ammonium porewater (see porewater sampling depth) (µmol/l)

characteristic: bacterial 16s gene copy number (copies)

characteristic: calcium porewater (see porewater sampling depth) (µmol/l)

characteristic: carbon/nitrogen ratio

characteristic: chlorophyll a (µg/l)

characteristic: collection date

characteristic: conductivity (ms/m)

text: Sample from AU Lake Mesocosm Warming Experiment (LMWE) in Lemming, Denmark, of mesocosm D2 of top 4 cm of sediment, sampled on 15 June 2020, one year after resuming nitrogen fertilization, sequencing the bacterial 16S rRNA gene V3-V4 region

characteristic: description

characteristic: diffusive carbon dioxide emissions (mg/m2/d)

characteristic: diffusive methane emissions (mg/m2/d)

characteristic: diffusive nitrous oxide emissions (mg/m2/d)

characteristic: elodea cover (%)

characteristic: elodea volume inhabited (%)

text: Shallow lake

characteristic: environment (biome)

text: Sediment top 4 cm

characteristic: environment (feature)

text: Sediment

characteristic: environment (material)

characteristic: filamentous algae volume inhabited (%)

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

text: metagenome

characteristic: investigation type

characteristic: iron surface water (mg/l)

characteristic: nitrate/nitrite surface water (mg/l)

text: High

text: metagenome

text: 341F (CCTAYGGGRBGCASCAG) and 806R (GGACTACNNGGGTATCTAAT)

characteristic: phosphate porewater (see porewater sampling depth) (µmol/l)

characteristic: phosphate surface water (mg/l)

characteristic: pmoa gene copy number (copies)

characteristic: porewater sampling depth (cm)

characteristic: potamogeton cover (%)

characteristic: potamogeton volume inhabited (%)

characteristic: potassium porewater (see porewater sampling depth) (µmol/l)

text: metagenome

text: sediment

text: Novaseq 6000

characteristic: silicate porewater (see porewater sampling depth) (µmol/l)

characteristic: sodium porewater (see porewater sampling depth) (µmol/l)

characteristic: sulphur porewater (see porewater sampling depth) (µmol/l)

text: LMWE sediment mesocosm D2 bacterial 16S in week 52

characteristic: total phosporus porewater (see porewater sampling depth) (µmol/l)

characteristic: week relative to resuming nitrogen fertilization

characteristic: zink porewater (see porewater sampling depth) (µmol/l)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RADBOUD UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: aluminium porewater (see porewater sampling depth) (µmol/l)

characteristic: ammonium porewater (see porewater sampling depth) (µmol/l)

characteristic: bacterial 16s gene copy number (copies)

characteristic: calcium porewater (see porewater sampling depth) (µmol/l)

characteristic: carbon/nitrogen ratio

characteristic: chlorophyll a (µg/l)

characteristic: collection date

characteristic: conductivity (ms/m)

text: Sample from AU Lake Mesocosm Warming Experiment (LMWE) in Lemming, Denmark, of mesocosm D3 of top 4 cm of sediment, sampled on 15 June 2020, one year after resuming nitrogen fertilization, sequencing the bacterial 16S rRNA gene V3-V4 region

characteristic: description

characteristic: diffusive carbon dioxide emissions (mg/m2/d)

characteristic: diffusive methane emissions (mg/m2/d)

characteristic: diffusive nitrous oxide emissions (mg/m2/d)

characteristic: elodea cover (%)

characteristic: elodea volume inhabited (%)

text: Shallow lake

characteristic: environment (biome)

text: Sediment top 4 cm

characteristic: environment (feature)

text: Sediment

characteristic: environment (material)

characteristic: filamentous algae volume inhabited (%)

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: iron porewater (see porewater sampling depth) (µmol/l)

characteristic: magnesium porewater (see porewater sampling depth) (µmol/l)

characteristic: manganese porewater (see porewater sampling depth) (µmol/l)

characteristic: mcra copy number (copies)

characteristic: mesocosm

characteristic: methane oxidation potential (µmol/h/g)

characteristic: methane porewater (see porewater sampling depth) (mmol/l)

characteristic: nitrate porewater (see porewater sampling depth) (µmol/l)

text: High

characteristic: nutrient treatment

text: metagenome

characteristic: organism

characteristic: p-olsen top 4 cm sediment (µmol/g)

characteristic: pcr primers

characteristic: ph

characteristic: project name

text: metagenome

text: sediment

characteristic: sediment environmental package

text: Novaseq 6000

text: LMWE sediment mesocosm D3 bacterial 16S in week 52


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RADBOUD UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: aluminium porewater (see porewater sampling depth) (µmol/l)

characteristic: ammonium porewater (see porewater sampling depth) (µmol/l)

characteristic: bacterial 16s gene copy number (copies)

characteristic: calcium porewater (see porewater sampling depth) (µmol/l)

characteristic: carbon/nitrogen ratio

characteristic: chlorophyll a (µg/l)

characteristic: collection date

characteristic: conductivity (ms/m)

text: Sample from AU Lake Mesocosm Warming Experiment (LMWE) in Lemming, Denmark, of mesocosm E1 of top 4 cm of sediment, sampled on 15 June 2020, one year after resuming nitrogen fertilization, sequencing the bacterial 16S rRNA gene V3-V4 region

characteristic: description

characteristic: diffusive carbon dioxide emissions (mg/m2/d)

characteristic: diffusive methane emissions (mg/m2/d)

characteristic: diffusive nitrous oxide emissions (mg/m2/d)

characteristic: elodea cover (%)

characteristic: elodea volume inhabited (%)

text: Shallow lake

characteristic: environment (biome)

text: Sediment top 4 cm

characteristic: environment (feature)

text: Sediment

characteristic: environment (material)

characteristic: filamentous algae volume inhabited (%)

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

text: metagenome

characteristic: investigation type

characteristic: iron surface water (mg/l)

characteristic: nitrate/nitrite surface water (mg/l)

text: Low

text: metagenome

characteristic: phosphate porewater (see porewater sampling depth) (µmol/l)

characteristic: phosphate surface water (mg/l)

characteristic: pmoa gene copy number (copies)

characteristic: porewater sampling depth (cm)

characteristic: potamogeton cover (%)

characteristic: potamogeton volume inhabited (%)

characteristic: potassium porewater (see porewater sampling depth) (µmol/l)

text: metagenome

text: sediment

text: Novaseq 6000

characteristic: silicate porewater (see porewater sampling depth) (µmol/l)

characteristic: sodium porewater (see porewater sampling depth) (µmol/l)

characteristic: sulphur porewater (see porewater sampling depth) (µmol/l)

text: Ambient

text: LMWE sediment mesocosm E1 bacterial 16S in week 52

characteristic: total phosporus porewater (see porewater sampling depth) (µmol/l)

characteristic: week relative to resuming nitrogen fertilization

characteristic: zink porewater (see porewater sampling depth) (µmol/l)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RADBOUD UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: aluminium porewater (see porewater sampling depth) (µmol/l)

characteristic: ammonium porewater (see porewater sampling depth) (µmol/l)

characteristic: bacterial 16s gene copy number (copies)

characteristic: calcium porewater (see porewater sampling depth) (µmol/l)

characteristic: carbon/nitrogen ratio

characteristic: chlorophyll a (µg/l)

characteristic: collection date

characteristic: conductivity (ms/m)

text: Sample from AU Lake Mesocosm Warming Experiment (LMWE) in Lemming, Denmark, of mesocosm E2 of top 4 cm of sediment, sampled on 15 June 2020, one year after resuming nitrogen fertilization, sequencing the bacterial 16S rRNA gene V3-V4 region

characteristic: description

characteristic: diffusive carbon dioxide emissions (mg/m2/d)

characteristic: diffusive methane emissions (mg/m2/d)

characteristic: diffusive nitrous oxide emissions (mg/m2/d)

characteristic: elodea cover (%)

characteristic: elodea volume inhabited (%)

text: Shallow lake

characteristic: environment (biome)

text: Sediment top 4 cm

characteristic: environment (feature)

text: Sediment

characteristic: environment (material)

characteristic: filamentous algae volume inhabited (%)

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: iron porewater (see porewater sampling depth) (µmol/l)

characteristic: magnesium porewater (see porewater sampling depth) (µmol/l)

characteristic: manganese porewater (see porewater sampling depth) (µmol/l)

characteristic: mcra copy number (copies)

characteristic: mesocosm

characteristic: methane oxidation potential (µmol/h/g)

characteristic: methane porewater (see porewater sampling depth) (mmol/l)

characteristic: nitrate porewater (see porewater sampling depth) (µmol/l)

text: Low

characteristic: nutrient treatment

text: metagenome

characteristic: organism

characteristic: p-olsen top 4 cm sediment (µmol/g)

characteristic: pcr primers

characteristic: ph

characteristic: project name

text: metagenome

text: sediment

characteristic: sediment environmental package

text: Novaseq 6000

text: LMWE sediment mesocosm E2 bacterial 16S in week 52


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RADBOUD UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: aluminium porewater (see porewater sampling depth) (µmol/l)

characteristic: ammonium porewater (see porewater sampling depth) (µmol/l)

characteristic: bacterial 16s gene copy number (copies)

characteristic: calcium porewater (see porewater sampling depth) (µmol/l)

characteristic: carbon/nitrogen ratio

characteristic: chlorophyll a (µg/l)

characteristic: collection date

characteristic: conductivity (ms/m)

text: Sample from AU Lake Mesocosm Warming Experiment (LMWE) in Lemming, Denmark, of mesocosm E3 of top 4 cm of sediment, sampled on 15 June 2020, one year after resuming nitrogen fertilization, sequencing the bacterial 16S rRNA gene V3-V4 region

characteristic: description

characteristic: diffusive carbon dioxide emissions (mg/m2/d)

characteristic: diffusive methane emissions (mg/m2/d)

characteristic: diffusive nitrous oxide emissions (mg/m2/d)

characteristic: elodea cover (%)

characteristic: elodea volume inhabited (%)

text: Shallow lake

characteristic: environment (biome)

text: Sediment top 4 cm

characteristic: environment (feature)

text: Sediment

characteristic: environment (material)

characteristic: filamentous algae volume inhabited (%)

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

text: metagenome

characteristic: investigation type

characteristic: iron surface water (mg/l)

characteristic: nitrate/nitrite surface water (mg/l)

text: Low

text: metagenome

characteristic: phosphate porewater (see porewater sampling depth) (µmol/l)

characteristic: phosphate surface water (mg/l)

characteristic: pmoa gene copy number (copies)

characteristic: porewater sampling depth (cm)

characteristic: potamogeton cover (%)

characteristic: potamogeton volume inhabited (%)

characteristic: potassium porewater (see porewater sampling depth) (µmol/l)

text: metagenome

text: sediment

text: Novaseq 6000

characteristic: silicate porewater (see porewater sampling depth) (µmol/l)

characteristic: sodium porewater (see porewater sampling depth) (µmol/l)

characteristic: sulphur porewater (see porewater sampling depth) (µmol/l)

text: LMWE sediment mesocosm E3 bacterial 16S in week 52

characteristic: total phosporus porewater (see porewater sampling depth) (µmol/l)

characteristic: week relative to resuming nitrogen fertilization

characteristic: zink porewater (see porewater sampling depth) (µmol/l)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RADBOUD UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: aluminium porewater (see porewater sampling depth) (µmol/l)

characteristic: ammonium porewater (see porewater sampling depth) (µmol/l)

characteristic: bacterial 16s gene copy number (copies)

characteristic: calcium porewater (see porewater sampling depth) (µmol/l)

characteristic: carbon/nitrogen ratio

characteristic: chlorophyll a (µg/l)

characteristic: collection date

characteristic: conductivity (ms/m)

text: Sample from AU Lake Mesocosm Warming Experiment (LMWE) in Lemming, Denmark, of mesocosm F1 of top 4 cm of sediment, sampled on 15 June 2020, one year after resuming nitrogen fertilization, sequencing the bacterial 16S rRNA gene V3-V4 region

characteristic: description

characteristic: diffusive carbon dioxide emissions (mg/m2/d)

characteristic: diffusive methane emissions (mg/m2/d)

characteristic: diffusive nitrous oxide emissions (mg/m2/d)

characteristic: elodea cover (%)

characteristic: elodea volume inhabited (%)

text: Shallow lake

characteristic: environment (biome)

text: Sediment top 4 cm

characteristic: environment (feature)

text: Sediment

characteristic: environment (material)

characteristic: filamentous algae volume inhabited (%)

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: iron porewater (see porewater sampling depth) (µmol/l)

characteristic: magnesium porewater (see porewater sampling depth) (µmol/l)

characteristic: manganese porewater (see porewater sampling depth) (µmol/l)

characteristic: mcra copy number (copies)

characteristic: mesocosm

characteristic: methane oxidation potential (µmol/h/g)

characteristic: methane porewater (see porewater sampling depth) (mmol/l)

characteristic: nitrate porewater (see porewater sampling depth) (µmol/l)

text: High

characteristic: nutrient treatment

text: metagenome

characteristic: organism

characteristic: p-olsen top 4 cm sediment (µmol/g)

characteristic: pcr primers

characteristic: ph

characteristic: project name

text: metagenome

text: sediment

characteristic: sediment environmental package

text: Novaseq 6000

text: Ambient

text: LMWE sediment mesocosm F1 bacterial 16S in week 52


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RADBOUD UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: aluminium porewater (see porewater sampling depth) (µmol/l)

characteristic: ammonium porewater (see porewater sampling depth) (µmol/l)

characteristic: bacterial 16s gene copy number (copies)

characteristic: calcium porewater (see porewater sampling depth) (µmol/l)

characteristic: carbon/nitrogen ratio

characteristic: chlorophyll a (µg/l)

characteristic: collection date

characteristic: conductivity (ms/m)

text: Sample from AU Lake Mesocosm Warming Experiment (LMWE) in Lemming, Denmark, of mesocosm F2 of top 4 cm of sediment, sampled on 15 June 2020, one year after resuming nitrogen fertilization, sequencing the bacterial 16S rRNA gene V3-V4 region

characteristic: description

characteristic: diffusive carbon dioxide emissions (mg/m2/d)

characteristic: diffusive methane emissions (mg/m2/d)

characteristic: diffusive nitrous oxide emissions (mg/m2/d)

characteristic: elodea cover (%)

characteristic: elodea volume inhabited (%)

text: Shallow lake

characteristic: environment (biome)

text: Sediment top 4 cm

characteristic: environment (feature)

text: Sediment

characteristic: environment (material)

characteristic: filamentous algae volume inhabited (%)

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

text: metagenome

characteristic: investigation type

characteristic: iron surface water (mg/l)

characteristic: nitrate/nitrite surface water (mg/l)

text: High

text: metagenome

characteristic: phosphate porewater (see porewater sampling depth) (µmol/l)

characteristic: phosphate surface water (mg/l)

characteristic: pmoa gene copy number (copies)

characteristic: porewater sampling depth (cm)

characteristic: potamogeton cover (%)

characteristic: potamogeton volume inhabited (%)

characteristic: potassium porewater (see porewater sampling depth) (µmol/l)

text: metagenome

text: sediment

text: Novaseq 6000

characteristic: silicate porewater (see porewater sampling depth) (µmol/l)

characteristic: sodium porewater (see porewater sampling depth) (µmol/l)

characteristic: sulphur porewater (see porewater sampling depth) (µmol/l)

text: LMWE sediment mesocosm F2 bacterial 16S in week 52

characteristic: total phosporus porewater (see porewater sampling depth) (µmol/l)

characteristic: week relative to resuming nitrogen fertilization

characteristic: zink porewater (see porewater sampling depth) (µmol/l)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RADBOUD UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: aluminium porewater (see porewater sampling depth) (µmol/l)

characteristic: ammonium porewater (see porewater sampling depth) (µmol/l)

characteristic: bacterial 16s gene copy number (copies)

characteristic: calcium porewater (see porewater sampling depth) (µmol/l)

characteristic: carbon/nitrogen ratio

characteristic: chlorophyll a (µg/l)

characteristic: collection date

characteristic: conductivity (ms/m)

text: Sample from AU Lake Mesocosm Warming Experiment (LMWE) in Lemming, Denmark, of mesocosm F3 of top 4 cm of sediment, sampled on 15 June 2020, one year after resuming nitrogen fertilization, sequencing the bacterial 16S rRNA gene V3-V4 region

characteristic: description

characteristic: diffusive carbon dioxide emissions (mg/m2/d)

characteristic: diffusive methane emissions (mg/m2/d)

characteristic: diffusive nitrous oxide emissions (mg/m2/d)

characteristic: elodea cover (%)

characteristic: elodea volume inhabited (%)

text: Shallow lake

characteristic: environment (biome)

text: Sediment top 4 cm

characteristic: environment (feature)

text: Sediment

characteristic: environment (material)

characteristic: filamentous algae volume inhabited (%)

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: iron porewater (see porewater sampling depth) (µmol/l)

characteristic: magnesium porewater (see porewater sampling depth) (µmol/l)

characteristic: manganese porewater (see porewater sampling depth) (µmol/l)

characteristic: mcra copy number (copies)

characteristic: mesocosm

characteristic: methane oxidation potential (µmol/h/g)

characteristic: methane porewater (see porewater sampling depth) (mmol/l)

characteristic: nitrate porewater (see porewater sampling depth) (µmol/l)

text: High

characteristic: nutrient treatment

text: metagenome

characteristic: organism

characteristic: p-olsen top 4 cm sediment (µmol/g)

characteristic: pcr primers

characteristic: ph

text: MOB-Warming-NitrogenFertilization-ShallowLakes

characteristic: project name

text: metagenome

text: sediment

characteristic: sediment environmental package

text: Novaseq 6000

text: LMWE sediment mesocosm F3 bacterial 16S in week 52


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RADBOUD UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: aluminium porewater (see porewater sampling depth) (µmol/l)

characteristic: ammonium porewater (see porewater sampling depth) (µmol/l)

characteristic: bacterial 16s gene copy number (copies)

characteristic: calcium porewater (see porewater sampling depth) (µmol/l)

characteristic: carbon/nitrogen ratio

characteristic: chlorophyll a (µg/l)

characteristic: collection date

characteristic: conductivity (ms/m)

text: Sample from AU Lake Mesocosm Warming Experiment (LMWE) in Lemming, Denmark, of mesocosm G1 of top 4 cm of sediment, sampled on 15 June 2020, one year after resuming nitrogen fertilization, sequencing the bacterial 16S rRNA gene V3-V4 region

characteristic: description

characteristic: diffusive carbon dioxide emissions (mg/m2/d)

characteristic: diffusive methane emissions (mg/m2/d)

characteristic: diffusive nitrous oxide emissions (mg/m2/d)

characteristic: elodea cover (%)

characteristic: elodea volume inhabited (%)

text: Shallow lake

characteristic: environment (biome)

text: Sediment top 4 cm

characteristic: environment (feature)

text: Sediment

characteristic: environment (material)

characteristic: filamentous algae volume inhabited (%)

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

text: metagenome

characteristic: investigation type

characteristic: iron surface water (mg/l)

characteristic: nitrate/nitrite surface water (mg/l)

text: High

text: metagenome

text: 341F (CCTAYGGGRBGCASCAG) and 806R (GGACTACNNGGGTATCTAAT)

characteristic: phosphate porewater (see porewater sampling depth) (µmol/l)

characteristic: phosphate surface water (mg/l)

characteristic: pmoa gene copy number (copies)

characteristic: porewater sampling depth (cm)

characteristic: potamogeton cover (%)

characteristic: potamogeton volume inhabited (%)

characteristic: potassium porewater (see porewater sampling depth) (µmol/l)

text: metagenome

text: sediment

text: Novaseq 6000

characteristic: silicate porewater (see porewater sampling depth) (µmol/l)

characteristic: sodium porewater (see porewater sampling depth) (µmol/l)

characteristic: sulphur porewater (see porewater sampling depth) (µmol/l)

text: Ambient

text: LMWE sediment mesocosm G1 bacterial 16S in week 52

characteristic: total phosporus porewater (see porewater sampling depth) (µmol/l)

characteristic: week relative to resuming nitrogen fertilization

characteristic: zink porewater (see porewater sampling depth) (µmol/l)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RADBOUD UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: aluminium porewater (see porewater sampling depth) (µmol/l)

characteristic: ammonium porewater (see porewater sampling depth) (µmol/l)

characteristic: bacterial 16s gene copy number (copies)

characteristic: calcium porewater (see porewater sampling depth) (µmol/l)

characteristic: carbon/nitrogen ratio

characteristic: chlorophyll a (µg/l)

characteristic: collection date

characteristic: conductivity (ms/m)

text: Sample from AU Lake Mesocosm Warming Experiment (LMWE) in Lemming, Denmark, of mesocosm G2 of top 4 cm of sediment, sampled on 15 June 2020, one year after resuming nitrogen fertilization, sequencing the bacterial 16S rRNA gene V3-V4 region

characteristic: description

characteristic: diffusive carbon dioxide emissions (mg/m2/d)

characteristic: diffusive methane emissions (mg/m2/d)

characteristic: diffusive nitrous oxide emissions (mg/m2/d)

characteristic: elodea cover (%)

characteristic: elodea volume inhabited (%)

text: Shallow lake

characteristic: environment (biome)

text: Sediment top 4 cm

characteristic: environment (feature)

text: Sediment

characteristic: environment (material)

characteristic: filamentous algae volume inhabited (%)

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: iron porewater (see porewater sampling depth) (µmol/l)

characteristic: magnesium porewater (see porewater sampling depth) (µmol/l)

characteristic: manganese porewater (see porewater sampling depth) (µmol/l)

characteristic: mcra copy number (copies)

characteristic: mesocosm

characteristic: methane oxidation potential (µmol/h/g)

characteristic: methane porewater (see porewater sampling depth) (mmol/l)

characteristic: nitrate porewater (see porewater sampling depth) (µmol/l)

text: High

characteristic: nutrient treatment

text: metagenome

characteristic: organism

characteristic: p-olsen top 4 cm sediment (µmol/g)

characteristic: pcr primers

characteristic: ph

characteristic: project name

text: metagenome

text: sediment

characteristic: sediment environmental package

text: Novaseq 6000

text: LMWE sediment mesocosm G2 bacterial 16S in week 52


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RADBOUD UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: aluminium porewater (see porewater sampling depth) (µmol/l)

characteristic: ammonium porewater (see porewater sampling depth) (µmol/l)

characteristic: bacterial 16s gene copy number (copies)

characteristic: calcium porewater (see porewater sampling depth) (µmol/l)

characteristic: carbon/nitrogen ratio

characteristic: chlorophyll a (µg/l)

characteristic: collection date

characteristic: conductivity (ms/m)

text: Sample from AU Lake Mesocosm Warming Experiment (LMWE) in Lemming, Denmark, of mesocosm G3 of top 4 cm of sediment, sampled on 15 June 2020, one year after resuming nitrogen fertilization, sequencing the bacterial 16S rRNA gene V3-V4 region

characteristic: description

characteristic: diffusive carbon dioxide emissions (mg/m2/d)

characteristic: diffusive methane emissions (mg/m2/d)

characteristic: diffusive nitrous oxide emissions (mg/m2/d)

characteristic: elodea cover (%)

characteristic: elodea volume inhabited (%)

text: Shallow lake

characteristic: environment (biome)

text: Sediment top 4 cm

characteristic: environment (feature)

text: Sediment

characteristic: environment (material)

characteristic: filamentous algae volume inhabited (%)

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

text: metagenome

characteristic: investigation type

characteristic: iron surface water (mg/l)

characteristic: nitrate/nitrite surface water (mg/l)

text: High

text: metagenome

characteristic: phosphate porewater (see porewater sampling depth) (µmol/l)

characteristic: phosphate surface water (mg/l)

characteristic: pmoa gene copy number (copies)

characteristic: porewater sampling depth (cm)

characteristic: potamogeton cover (%)

characteristic: potamogeton volume inhabited (%)

characteristic: potassium porewater (see porewater sampling depth) (µmol/l)

text: metagenome

text: sediment

text: Novaseq 6000

characteristic: silicate porewater (see porewater sampling depth) (µmol/l)

characteristic: sodium porewater (see porewater sampling depth) (µmol/l)

characteristic: sulphur porewater (see porewater sampling depth) (µmol/l)

text: LMWE sediment mesocosm G3 bacterial 16S in week 52

characteristic: total phosporus porewater (see porewater sampling depth) (µmol/l)

characteristic: week relative to resuming nitrogen fertilization

characteristic: zink porewater (see porewater sampling depth) (µmol/l)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RADBOUD UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: aluminium porewater (see porewater sampling depth) (µmol/l)

characteristic: ammonium porewater (see porewater sampling depth) (µmol/l)

characteristic: bacterial 16s gene copy number (copies)

characteristic: calcium porewater (see porewater sampling depth) (µmol/l)

characteristic: carbon/nitrogen ratio

characteristic: chlorophyll a (µg/l)

characteristic: collection date

characteristic: conductivity (ms/m)

text: Sample from AU Lake Mesocosm Warming Experiment (LMWE) in Lemming, Denmark, of mesocosm H1 of top 4 cm of sediment, sampled on 15 June 2020, one year after resuming nitrogen fertilization, sequencing the bacterial 16S rRNA gene V3-V4 region

characteristic: description

characteristic: diffusive carbon dioxide emissions (mg/m2/d)

characteristic: diffusive methane emissions (mg/m2/d)

characteristic: diffusive nitrous oxide emissions (mg/m2/d)

characteristic: elodea cover (%)

characteristic: elodea volume inhabited (%)

text: Shallow lake

characteristic: environment (biome)

text: Sediment top 4 cm

characteristic: environment (feature)

text: Sediment

characteristic: environment (material)

characteristic: filamentous algae volume inhabited (%)

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: iron porewater (see porewater sampling depth) (µmol/l)

characteristic: magnesium porewater (see porewater sampling depth) (µmol/l)

characteristic: manganese porewater (see porewater sampling depth) (µmol/l)

characteristic: mcra copy number (copies)

characteristic: mesocosm

characteristic: methane oxidation potential (µmol/h/g)

characteristic: methane porewater (see porewater sampling depth) (mmol/l)

characteristic: nitrate porewater (see porewater sampling depth) (µmol/l)

text: Low

characteristic: nutrient treatment

text: metagenome

characteristic: organism

characteristic: p-olsen top 4 cm sediment (µmol/g)

characteristic: pcr primers

characteristic: ph

characteristic: project name

text: metagenome

text: sediment

characteristic: sediment environmental package

text: Novaseq 6000

text: Ambient

text: LMWE sediment mesocosm H1 bacterial 16S in week 52


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RADBOUD UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: aluminium porewater (see porewater sampling depth) (µmol/l)

characteristic: ammonium porewater (see porewater sampling depth) (µmol/l)

characteristic: bacterial 16s gene copy number (copies)

characteristic: calcium porewater (see porewater sampling depth) (µmol/l)

characteristic: carbon/nitrogen ratio

characteristic: chlorophyll a (µg/l)

characteristic: collection date

characteristic: conductivity (ms/m)

text: Sample from AU Lake Mesocosm Warming Experiment (LMWE) in Lemming, Denmark, of mesocosm H2 of top 4 cm of sediment, sampled on 15 June 2020, one year after resuming nitrogen fertilization, sequencing the bacterial 16S rRNA gene V3-V4 region

characteristic: description

characteristic: diffusive carbon dioxide emissions (mg/m2/d)

characteristic: diffusive methane emissions (mg/m2/d)

characteristic: diffusive nitrous oxide emissions (mg/m2/d)

characteristic: elodea cover (%)

characteristic: elodea volume inhabited (%)

text: Shallow lake

characteristic: environment (biome)

text: Sediment top 4 cm

characteristic: environment (feature)

text: Sediment

characteristic: environment (material)

characteristic: filamentous algae volume inhabited (%)

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

text: metagenome

characteristic: investigation type

characteristic: iron surface water (mg/l)

characteristic: nitrate/nitrite surface water (mg/l)

text: Low

text: metagenome

characteristic: phosphate porewater (see porewater sampling depth) (µmol/l)

characteristic: phosphate surface water (mg/l)

characteristic: pmoa gene copy number (copies)

characteristic: porewater sampling depth (cm)

characteristic: potamogeton cover (%)

characteristic: potamogeton volume inhabited (%)

characteristic: potassium porewater (see porewater sampling depth) (µmol/l)

text: metagenome

text: sediment

text: Novaseq 6000

characteristic: silicate porewater (see porewater sampling depth) (µmol/l)

characteristic: sodium porewater (see porewater sampling depth) (µmol/l)

characteristic: sulphur porewater (see porewater sampling depth) (µmol/l)

text: LMWE sediment mesocosm H2 bacterial 16S in week 52

characteristic: total phosporus porewater (see porewater sampling depth) (µmol/l)

characteristic: week relative to resuming nitrogen fertilization

characteristic: zink porewater (see porewater sampling depth) (µmol/l)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RADBOUD UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: aluminium porewater (see porewater sampling depth) (µmol/l)

characteristic: ammonium porewater (see porewater sampling depth) (µmol/l)

characteristic: bacterial 16s gene copy number (copies)

characteristic: calcium porewater (see porewater sampling depth) (µmol/l)

characteristic: carbon/nitrogen ratio

characteristic: chlorophyll a (µg/l)

characteristic: collection date

characteristic: conductivity (ms/m)

text: Sample from AU Lake Mesocosm Warming Experiment (LMWE) in Lemming, Denmark, of mesocosm H3 of top 4 cm of sediment, sampled on 15 June 2020, one year after resuming nitrogen fertilization, sequencing the bacterial 16S rRNA gene V3-V4 region

characteristic: description

characteristic: diffusive carbon dioxide emissions (mg/m2/d)

characteristic: diffusive methane emissions (mg/m2/d)

characteristic: diffusive nitrous oxide emissions (mg/m2/d)

characteristic: elodea cover (%)

characteristic: elodea volume inhabited (%)

text: Shallow lake

characteristic: environment (biome)

text: Sediment top 4 cm

characteristic: environment (feature)

text: Sediment

characteristic: environment (material)

characteristic: filamentous algae volume inhabited (%)

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: iron porewater (see porewater sampling depth) (µmol/l)

characteristic: magnesium porewater (see porewater sampling depth) (µmol/l)

characteristic: manganese porewater (see porewater sampling depth) (µmol/l)

characteristic: mcra copy number (copies)

characteristic: mesocosm

characteristic: methane oxidation potential (µmol/h/g)

characteristic: methane porewater (see porewater sampling depth) (mmol/l)

characteristic: nitrate porewater (see porewater sampling depth) (µmol/l)

text: Low

characteristic: nutrient treatment

text: metagenome

characteristic: organism

characteristic: p-olsen top 4 cm sediment (µmol/g)

characteristic: pcr primers

characteristic: ph

characteristic: project name

text: metagenome

text: sediment

characteristic: sediment environmental package

text: Novaseq 6000

text: LMWE sediment mesocosm H3 bacterial 16S in week 52


E-MTAB-10193:Sample 10

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10193:Sample 10

tag: Namespace:Department of Biomedical Science, Neuroscience Institute

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: pluripotent stem cell

characteristic: cell type

text: human

characteristic: common name

text: Protocols: Cells were harvested at day 2 of culture and sorted into a 15ml falcon tube at 500,000 cells per sample. Post sort, cells were centrifuged at 270 x g for 3 minutes, supernatant removed and cell pellets were stored at -80C prior to RNA extraction. Co-culture Total RNA was extracted using Qiagen RNAeasy Kit as per the manufacturers instructions. Total RNA was quality controlled and quantified using Qubit 3.0 (LifeTechnologies) and Nanodrop LITE spectrophotometer (ThermoFisher). mRNA from eukaryotic organisms was enriched using oligo(dT) beads and then fragmented randomly in fragmentation buffer, followed by cDNA A total amount of 3 µg RNA per sample was used as input material for the RNA sample preparations. Sequencing libraries were generated using NEBNext® Ultra™ RNA Library Prep Kit for Illumina® (NEB, USA) following manufacturer’s recommendations and index codes were added to attribute sequences to each sample. Briefly, mRNA was purified from total RNA using poly-T oligo-attached magnetic beads. Fragmentation was carried out using divalent cations under elevated temperature in NEBNext First Strand Synthesis Reaction Buffer (5X. First strand cDNA was synthesized using random hexamer primer and M-MuLV Reverse Transcriptase (RNase H- . Second strand cDNA synthesis was subsequently performed using DNA Polymerase I and RNase H. Remaining overhangs were converted into blunt ends via exonuclease/polymerase activities. After adenylation of 3’ ends of DNA fragments, NEBNext Adaptor with hairpin loop structure were ligated to prepare for hybridization. In order to select cDNA fragments of preferentially 150~200 bp in length, the library fragments were purified with AMPure XP system (Beckman Coulter,Beverly, USA). Then 3 µl USER Enzyme (NEB, USA) was used with size-selected, adaptor-ligated cDNA at 37°C for 15 min followed by 5 min at 95 °C before PCR. Then PCR was performed with Phusion High-Fidelity DNA polymerase, Universal PCR primers and Index (X) Primer. At last, PCR products were purified (AMPure XP system) and library quality was assessed on the Agilent Bioanalyzer 2100 system.

characteristic: description

text: blastocyst

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: co-culture

characteristic: growth condition

characteristic: karyotype

text: Homo sapiens

text: Homo sapiens

text: inner cell mass

characteristic: organism part

text: competitive growth loser

characteristic: phenotype

text: Homo sapiens

text: Sample 10

characteristic: title


E-MTAB-10193:Sample 14

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Department of Biomedical Science, Neuroscience Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-10193:Sample 14

text: ArrayExpress

text: pluripotent stem cell

text: human

text: blastocyst

text: normal

text: wild type genotype

text: co-culture

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: inner cell mass

text: competitive growth loser

text: Homo sapiens

text: Sample 14


E-MTAB-10193:Sample 2

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10193:Sample 2

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: pluripotent stem cell

characteristic: cell type

text: human

characteristic: common name

characteristic: description

text: blastocyst

text: normal

text: wild type genotype

text: co-culture

text: Homo sapiens

text: Homo sapiens

text: inner cell mass

text: competitive growth loser

text: Homo sapiens

text: Sample 2


E-MTAB-10193:Sample 6

text: public

text: E-MTAB-10193:Sample 6

text: ArrayExpress

text: pluripotent stem cell

text: human

text: blastocyst

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: co-culture

characteristic: growth condition

characteristic: karyotype

text: Homo sapiens

text: Homo sapiens

text: inner cell mass

characteristic: organism part

text: competitive growth loser

characteristic: phenotype

text: Homo sapiens

text: Sample 6

characteristic: title


E-MTAB-10193:Sample 12

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-10193:Sample 12

text: ArrayExpress

text: pluripotent stem cell

text: human

text: blastocyst

text: normal

text: wild type genotype

text: co-culture

text: 48,XX,+del(1)(p22p22),der(6)t(6;17)(q27;q1),+12,ish dup(20)(q11.21q11.21)

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: inner cell mass

text: competitive growth winner

text: Homo sapiens

text: Sample 12


E-MTAB-10193:Sample 16

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10193:Sample 16

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: pluripotent stem cell

characteristic: cell type

text: human

characteristic: common name

characteristic: description

text: blastocyst

text: normal

text: wild type genotype

text: co-culture

text: Homo sapiens

text: Homo sapiens

text: inner cell mass

text: competitive growth winner

text: Homo sapiens

text: Sample 16


E-MTAB-10193:Sample 8

text: public

text: E-MTAB-10193:Sample 8

text: ArrayExpress

text: pluripotent stem cell

text: human

text: blastocyst

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: co-culture

characteristic: growth condition

characteristic: karyotype

text: Homo sapiens

text: Homo sapiens

text: inner cell mass

characteristic: organism part

text: competitive growth winner

characteristic: phenotype

text: Homo sapiens

text: Sample 8

characteristic: title


E-MTAB-10193:Sample 4

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-10193:Sample 4

text: ArrayExpress

text: pluripotent stem cell

text: human

text: blastocyst

text: normal

text: wild type genotype

text: co-culture

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: inner cell mass

text: competitive growth winner

text: Homo sapiens

text: Sample 4


E-MTAB-10193:Sample 1

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10193:Sample 1

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: pluripotent stem cell

characteristic: cell type

text: human

characteristic: common name

text: Protocols: Cells were harvested at day 2 of culture and sorted into a 15ml falcon tube at 500,000 cells per sample. Post sort, cells were centrifuged at 270 x g for 3 minutes, supernatant removed and cell pellets were stored at -80C prior to RNA extraction. Separate culture Total RNA was extracted using Qiagen RNAeasy Kit as per the manufacturers instructions. Total RNA was quality controlled and quantified using Qubit 3.0 (LifeTechnologies) and Nanodrop LITE spectrophotometer (ThermoFisher). mRNA from eukaryotic organisms was enriched using oligo(dT) beads and then fragmented randomly in fragmentation buffer, followed by cDNA A total amount of 3 µg RNA per sample was used as input material for the RNA sample preparations. Sequencing libraries were generated using NEBNext® Ultra™ RNA Library Prep Kit for Illumina® (NEB, USA) following manufacturer’s recommendations and index codes were added to attribute sequences to each sample. Briefly, mRNA was purified from total RNA using poly-T oligo-attached magnetic beads. Fragmentation was carried out using divalent cations under elevated temperature in NEBNext First Strand Synthesis Reaction Buffer (5X. First strand cDNA was synthesized using random hexamer primer and M-MuLV Reverse Transcriptase (RNase H- . Second strand cDNA synthesis was subsequently performed using DNA Polymerase I and RNase H. Remaining overhangs were converted into blunt ends via exonuclease/polymerase activities. After adenylation of 3’ ends of DNA fragments, NEBNext Adaptor with hairpin loop structure were ligated to prepare for hybridization. In order to select cDNA fragments of preferentially 150~200 bp in length, the library fragments were purified with AMPure XP system (Beckman Coulter,Beverly, USA). Then 3 µl USER Enzyme (NEB, USA) was used with size-selected, adaptor-ligated cDNA at 37°C for 15 min followed by 5 min at 95 °C before PCR. Then PCR was performed with Phusion High-Fidelity DNA polymerase, Universal PCR primers and Index (X) Primer. At last, PCR products were purified (AMPure XP system) and library quality was assessed on the Agilent Bioanalyzer 2100 system.

characteristic: description

text: blastocyst

text: normal

text: wild type genotype

text: mono-culture

text: Homo sapiens

text: Homo sapiens

text: inner cell mass

text: competitive growth loser

text: Homo sapiens

text: Sample 1


E-MTAB-10193:Sample 13

text: public

text: E-MTAB-10193:Sample 13

text: ArrayExpress

text: pluripotent stem cell

text: human

text: blastocyst

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: mono-culture

characteristic: growth condition

characteristic: karyotype

text: Homo sapiens

text: Homo sapiens

text: inner cell mass

characteristic: organism part

text: competitive growth loser

characteristic: phenotype

text: Homo sapiens

text: Sample 13

characteristic: title


E-MTAB-10193:Sample 5

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-10193:Sample 5

text: ArrayExpress

text: pluripotent stem cell

text: human

text: blastocyst

text: normal

text: wild type genotype

text: mono-culture

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: inner cell mass

text: competitive growth loser

text: Homo sapiens

text: Sample 5


E-MTAB-10193:Sample 9

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10193:Sample 9

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: pluripotent stem cell

characteristic: cell type

text: human

characteristic: common name

characteristic: description

text: blastocyst

text: normal

text: wild type genotype

text: mono-culture

text: Homo sapiens

text: Homo sapiens

text: inner cell mass

text: competitive growth loser

text: Homo sapiens

text: Sample 9


E-MTAB-10193:Sample 11

text: public

text: E-MTAB-10193:Sample 11

text: ArrayExpress

text: pluripotent stem cell

text: human

text: blastocyst

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: mono-culture

characteristic: growth condition

characteristic: karyotype

text: Homo sapiens

text: Homo sapiens

text: inner cell mass

characteristic: organism part

text: competitive growth winner

characteristic: phenotype

text: Homo sapiens

text: Sample 11

characteristic: title


E-MTAB-10193:Sample 15

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-10193:Sample 15

text: ArrayExpress

text: pluripotent stem cell

text: human

text: blastocyst

text: normal

text: wild type genotype

text: mono-culture

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: inner cell mass

text: competitive growth winner

text: Homo sapiens

text: Sample 15


E-MTAB-10193:Sample 7

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10193:Sample 7

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: pluripotent stem cell

characteristic: cell type

text: human

characteristic: common name

characteristic: description

text: blastocyst

text: normal

text: wild type genotype

text: mono-culture

text: Homo sapiens

text: Homo sapiens

text: inner cell mass

text: competitive growth winner

text: Homo sapiens

text: Sample 7


E-MTAB-10193:Sample 3

text: public

text: E-MTAB-10193:Sample 3

text: ArrayExpress

text: pluripotent stem cell

text: human

text: blastocyst

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: mono-culture

characteristic: growth condition

characteristic: karyotype

text: Homo sapiens

text: Homo sapiens

text: inner cell mass

characteristic: organism part

text: competitive growth winner

characteristic: phenotype

text: Homo sapiens

text: Sample 3

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRAe (INRAe Montpellier)

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:INRAe (INRAe Montpellier)

characteristic: collection date

text: northern house mosquito

text: Field

text: Insecta

characteristic: environment (biome)

text: Ovary

characteristic: environment (feature)

text: microbial community

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Vic-la-Gardiole (Camping Europe)

characteristic: geographic location (region and locality)

text: host-associated

characteristic: host-associated environmental package

characteristic: investigation type

text: Culex pipiens

characteristic: organism

text: Mosquitoes microbiome

characteristic: project name

text: Culex pipiens

text: MiSeq

characteristic: sequencing method

text: Mosquito microbiome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRAe (INRAe Montpellier)

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: northern house mosquito

characteristic: common name

text: Laboratory

characteristic: description

text: Insecta

text: Whole

text: microbial community

text: France

text: Saint-Etienne (La Varenne)

text: host-associated

text: Culex pipiens

text: Mosquitoes microbiome

text: Culex pipiens

text: MiSeq

text: Mosquito microbiome

characteristic: title


text: INRAe (INRAe Montpellier)

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: collection date

text: northern house mosquito

text: Field

text: Insecta

characteristic: environment (biome)

text: Whole

characteristic: environment (feature)

text: microbial community

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Vic-la-Gardiole (Camping Europe)

text: host-associated

text: Culex pipiens

text: Mosquitoes microbiome

text: Culex pipiens

text: MiSeq

text: Mosquito microbiome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRAe (INRAe Montpellier)

text: public

text: northern house mosquito

text: Field

text: Insecta

text: Whole

text: microbial community

text: France

text: Le Bosc

characteristic: geographic location (region and locality)

text: host-associated

characteristic: host-associated environmental package

characteristic: investigation type

text: Culex pipiens

characteristic: organism

text: Mosquitoes microbiome

characteristic: project name

text: Culex pipiens

text: MiSeq

characteristic: sequencing method

text: Mosquito microbiome


text: INRAe (INRAe Montpellier)

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: northern house mosquito

characteristic: common name

text: Field

characteristic: description

text: Insecta

text: Ovary

text: microbial community

text: France

text: Le Bosc

text: host-associated

text: Culex pipiens

text: Mosquitoes microbiome

text: Culex pipiens

text: MiSeq

text: Mosquito microbiome

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRAe (INRAe Montpellier)

text: public

text: northern house mosquito

text: Laboratory

text: Insecta

characteristic: environment (biome)

text: Ovary

characteristic: environment (feature)

text: microbial community

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Saint-Etienne (La Varenne)

text: host-associated

text: Culex pipiens

text: Mosquitoes microbiome

text: Culex pipiens

text: MiSeq

text: Mosquito microbiome


text: INRAe (INRAe Montpellier)

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: southern house mosquito

text: Laboratory - Treated by antibiotics

text: Insecta

text: Whole

text: microbial community

text: France

text: Southern California (reared at ISEM Montpellier)

characteristic: geographic location (region and locality)

text: host-associated

characteristic: host-associated environmental package

characteristic: investigation type

text: Culex quinquefasciatus

characteristic: organism

text: Mosquitoes microbiome

characteristic: project name

text: Culex quinquefasciatus

text: MiSeq

characteristic: sequencing method

text: Mosquito microbiome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRAe (INRAe Montpellier)

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: southern house mosquito

characteristic: common name

text: Field

characteristic: description

text: Insecta

text: Ovary

text: microbial community

text: Guadeloupe

text: Prise d'Eau (Petit Bourg)

text: host-associated

text: Culex quinquefasciatus

text: Mosquitoes microbiome

text: Culex quinquefasciatus

text: MiSeq

text: Mosquito microbiome

characteristic: title


text: INRAe (INRAe Montpellier)

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: yellow fever mosquito

text: Field

text: Insecta

characteristic: environment (biome)

text: Ovary

characteristic: environment (feature)

text: microbial community

characteristic: environment (material)

text: Guadeloupe

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Prise d'Eau (Petit Bourg)

text: host-associated

text: Aedes aegypti

text: Mosquitoes microbiome

text: Aedes aegypti

text: MiSeq

text: Mosquito microbiome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRAe (INRAe Montpellier)

text: public

text: southern house mosquito

text: Field

text: Insecta

text: Whole

text: microbial community

text: Guadeloupe

text: Prise d'Eau (Petit Bourg)

characteristic: geographic location (region and locality)

text: host-associated

characteristic: host-associated environmental package

characteristic: investigation type

text: Culex quinquefasciatus

characteristic: organism

text: Mosquitoes microbiome

characteristic: project name

text: Culex quinquefasciatus

text: MiSeq

characteristic: sequencing method

text: Mosquito microbiome


text: INRAe (INRAe Montpellier)

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: yellow fever mosquito

characteristic: common name

text: Field

characteristic: description

text: Insecta

text: Whole

text: microbial community

text: Guadeloupe

text: Prise d'Eau (Petit Bourg)

text: host-associated

text: Aedes aegypti

text: Mosquitoes microbiome

text: Aedes aegypti

text: MiSeq

text: Mosquito microbiome

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY HOSPITAL JENA

text: public

tag: Namespace:UNIVERSITY HOSPITAL JENA

text: bacteria

text: routine

text: Germany

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: host scientific name

text: bacteria

characteristic: isolate

text: Hospital

characteristic: isolation source

text: Acinetobacter sp. ATCC 11171

text: Acinetobacter sp. ATCC 11171


text: UNIVERSITY HOSPITAL JENA

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: bacteria

text: routine

text: Germany

text: Homo sapiens

text: bacteria

text: Hospital

text: Klebsiella pneumoniae

characteristic: organism

text: Klebsiella pneumoniae


text: UNIVERSITY HOSPITAL JENA

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: bacteria

text: routine

text: Germany

text: Homo sapiens

text: bacteria

text: Hospital

text: Escherichia coli

text: Escherichia coli


text: UNIVERSITY HOSPITAL JENA

text: public

characteristic: Submitter Id

characteristic: collection date

text: bacteria

characteristic: common name

text: routine

text: Germany

text: Homo sapiens

text: bacteria

text: Hospital

text: Enterococcus faecium

text: Enterococcus faecium


characteristic: ENA-CHECKLIST

text: UNIVERSITY HOSPITAL JENA

text: public

text: bacteria

text: routine

characteristic: description

text: Germany

text: Homo sapiens

text: bacteria

text: Hospital

text: Klebsiella oxytoca

text: Klebsiella oxytoca

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY HOSPITAL JENA

text: public

text: bacteria

text: routine

text: Germany

text: Homo sapiens

text: bacteria

text: Hospital

text: Staphylococcus aureus

text: Staphylococcus aureus


text: UNIVERSITY HOSPITAL JENA

text: public

text: bacteria

text: routine

text: Germany

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: host scientific name

text: bacteria

characteristic: isolate

text: Hospital

text: Enterococcus faecalis

text: Enterococcus faecalis


text: UNIVERSITY HOSPITAL JENA

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: bacteria

text: routine

text: Germany

text: Homo sapiens

text: bacteria

text: Hospital

characteristic: isolation source

text: Enterobacter cloacae

text: Enterobacter cloacae


text: UNIVERSITY HOSPITAL JENA

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: bacteria

text: routine

text: Germany

text: Homo sapiens

text: bacteria

text: Hospital

text: Citrobacter freundii

characteristic: organism

text: Citrobacter freundii


text: INRAe (INRAe Montpellier)

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: blank sample

text: blank sample

text: DNA extraction control

characteristic: negative control

text: blank sample

text: blank sample

text: Mosquito microbiome


characteristic: ENA-CHECKLIST

text: Tromsoe Ecosystem Genomics

text: public

tag: Namespace:Tromsoe Ecosystem Genomics

text: Nykurvatn sequence library 1

characteristic: description

text: Yes

characteristic: environmental sample

text: Viridiplantae environmental sample

text: Viridiplantae environmental sample


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Tromsoe Ecosystem Genomics

text: public

text: Nykurvatn sequence library 2

text: Yes

text: Viridiplantae environmental sample

text: Viridiplantae environmental sample

characteristic: title


characteristic: External Id

text: Tromsoe Ecosystem Genomics

text: public

text: Torfdalsvatn sequence library 1

text: Yes

text: Viridiplantae environmental sample

text: Viridiplantae environmental sample


text: Tromsoe Ecosystem Genomics

text: public

text: Torfdalsvatn sequence library 2

text: Yes

text: Viridiplantae environmental sample

text: Viridiplantae environmental sample


text: University of Iceland

text: public

tag: Namespace:University of Iceland

characteristic: collection date

text: microorganism

characteristic: common name

text: 3 x 10 cm 1m between in a 12x12m plot. 0-5 cm and 5-10 cm pooled.

characteristic: composite design/sieving (if any)

text: Summer grazed by sheep

characteristic: current land use

text: gravelly desert habitats with <5% vegetation cover in highly exposed and eroded land dominated by forbs and graminoids

characteristic: current vegetation

text: Sub-arctic tundra

characteristic: environment (biome)

text: Highland

characteristic: environment (feature)

text: Soil

characteristic: environment (material)

text: Iceland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Audkuluheidi

characteristic: geographic location (region and locality)

text: metagenome

characteristic: investigation type

unit: mm

characteristic: mean annual and seasonal precipitation

unit: ºC

characteristic: mean annual and seasonal temperature

text: soil metagenome

characteristic: ph

text: Akello, B. 2019. Response of Icelandic soils to grazing exclusion. Thesis, United Nations University, Land Restoration Training Programme, Reykjavik, Iceland

characteristic: ph method

text: Shotgun metagenome sequences Microbial diversity in degraded tundra soils

characteristic: project name

text: Soil core diameter 2 cm

characteristic: sample collection device or method

unit: g

characteristic: sample weight for DNA extraction

text: soil metagenome

text: Shotgun metagenomic

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: Gravelly Vitrisol

characteristic: soil taxonomic/local classification

text: Samples fresh at 4�, from sample place to the lab (6 days), -20, (14 days), then moved to -70, before DNA extraction (march 2020-november2020)

characteristic: storage conditions (fresh/frozen/other)

text: Desert soil

unit: µg/L

characteristic: total nitrogen

unit: g/kg

characteristic: total organic carbon


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Iceland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: microorganism

characteristic: common name

characteristic: composite design/sieving (if any)

text: Summer grazed by sheep

characteristic: current land use

text: vegetated heath with >90% low-lying vegetation cover dominated by dwarf shrubs, forbs, graminoids and other vascular plants

characteristic: current vegetation

characteristic: description

text: Sub-arctic tundra

characteristic: environment (biome)

text: Highland

characteristic: environment (feature)

text: Soil

characteristic: environment (material)

text: Iceland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

text: Audkuluheidi

text: metagenome

text: soil metagenome

characteristic: organism

text: Soil core diameter 2 cm

text: soil metagenome

text: Shotgun metagenomic

text: soil

text: Brown Andosol

text: Heath soil

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Iceland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: microorganism

text: Summer grazed by sheep

text: Sub-arctic tundra

text: Highland

text: Soil

text: Iceland

characteristic: geographic location (longitude)

text: Theistareykir

characteristic: geographic location (region and locality)

text: metagenome

characteristic: investigation type

characteristic: mean annual and seasonal precipitation

characteristic: mean annual and seasonal temperature

text: soil metagenome

characteristic: ph

characteristic: ph method

characteristic: project name

text: Soil core diameter 2 cm

characteristic: sample collection device or method

characteristic: sample weight for DNA extraction

text: soil metagenome

text: Shotgun metagenomic

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: Gravelly Vitrisol

characteristic: soil taxonomic/local classification

characteristic: storage conditions (fresh/frozen/other)

text: Desert soil

characteristic: total nitrogen

characteristic: total organic carbon


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Iceland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: microorganism

characteristic: common name

characteristic: composite design/sieving (if any)

text: Summer grazed by sheep

characteristic: current land use

characteristic: current vegetation

characteristic: description

text: Sub-arctic tundra

characteristic: environment (biome)

text: Highland

characteristic: environment (feature)

text: Soil

characteristic: environment (material)

text: Iceland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

text: Theistareykir

text: metagenome

text: soil metagenome

characteristic: organism

text: Soil core diameter 2 cm

text: soil metagenome

text: Shotgun metagenomic

text: soil

text: Brown Andosol

text: Heath soil

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Royal Botanic Garden Edinburgh

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COPO

characteristic: broker name

text: REBECCA YAHR

characteristic: collected by

text: ROYAL BOTANIC GARDEN EDINBURGH

characteristic: collecting institution

text: United Kingdom

characteristic: geographic location (longitude)

text: Agyllshire | Glasdrum Wood National Nature Reserve | Mixed oak and birchwood on well-drained slope.

characteristic: geographic location (region and locality)

text: Mixed oak and birch wood, on well-drained soil. On south-facing, mossy base of open-grown old oak.

characteristic: habitat

text: REBECCA YAHR

characteristic: identified by

text: ROYAL BOTANIC GARDEN EDINBURGH

text: vegetative structure

characteristic: lifestage

text: Hypotrachyna taylorensis

text: WHOLE ORGANISM

characteristic: organism part

text: DTOL

characteristic: project name

text: Hypotrachyna taylorensis

text: ASEXUAL MORPH

characteristic: sex

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: 37d4d54e-3ee8-48f4-ba1f-e312fdb2178b-dtol-specimen

characteristic: tolid

type: derived from