text: University of Oxford

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: COPO

text: DOUGLAS BOYES

text: University of Oxford

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Berkshire | Wytham woods

characteristic: geographic location (region and locality)

text: Woodland

characteristic: habitat

text: DOUGLAS BOYES

characteristic: identified by

text: University of Oxford

text: adult

characteristic: lifestage

text: Spilarctia lutea

text: WHOLE ORGANISM

characteristic: organism part

text: DTOL

characteristic: project name

text: Spilarctia lutea

text: FEMALE

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text: Right wings mounted

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text: 29767a38-fca6-4a3c-945f-47e895a146ba-dtol-specimen

characteristic: title


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

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text: University of Oxford

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text: NOT PROVIDED

text: EarlhamInstitute

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text: public

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text: DOUGLAS BOYES

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text: University of Oxford

characteristic: collecting institution

text: United Kingdom

unit: m

unit: DD

text: Berkshire | Wytham woods

text: Woodland

text: DOUGLAS BOYES

text: University of Oxford

text: adult

text: Pseudoips prasinana

characteristic: organism

text: WHOLE ORGANISM

text: DTOL

text: Pseudoips prasinana

text: NOT COLLECTED

text: Right wings mounted

text: b64416ae-7bf7-43e9-909d-33eadf3bc257-dtol-specimen

characteristic: tolid

type: derived from


text: University of Oxford

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: COPO

text: DOUGLAS BOYES

text: University of Oxford

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Berkshire | Wytham woods

characteristic: geographic location (region and locality)

text: Woodland

characteristic: habitat

text: DOUGLAS BOYES

characteristic: identified by

text: University of Oxford

text: adult

characteristic: lifestage

text: Charanyca ferruginea

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characteristic: organism part

text: DTOL

characteristic: project name

text: Charanyca ferruginea

text: NOT COLLECTED

characteristic: sex

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text: Right wings mounted, 1 leg to freezer

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text: abe16e1f-4384-45fd-8cf5-ce399f9c752a-dtol-specimen

characteristic: title


characteristic: ENA-CHECKLIST

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text: University of Oxford

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text: NOT PROVIDED

text: EarlhamInstitute

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text: University of Oxford

characteristic: collecting institution

text: United Kingdom

text: Berkshire | Wytham woods

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text: University of Oxford

text: adult

text: Protodeltote pygarga

characteristic: organism

text: WHOLE ORGANISM

text: DTOL

text: Protodeltote pygarga

text: NOT COLLECTED

text: Right wings mounted, 2 legs to freezer

text: f4c45d74-5725-4554-8b84-2aa2dc4f3e8a-dtol-specimen


text: University of Oxford

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: COPO

text: LIAM CROWLEY

text: University of Oxford

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Berkshire | Wytham woods

characteristic: geographic location (region and locality)

text: On bramble flower

characteristic: habitat

text: LIAM CROWLEY

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text: University of Oxford

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text: Rutpela maculata

text: WHOLE ORGANISM

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text: DTOL

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text: public

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tag: Namespace:Fraunhofer Attract Eco'n'OMICs, Fraunhofer Institute for Molecular Biology and Applied Ecology, Schmallenberg, Germany  Evolutionary Ecology and Environmental Toxicology, Faculty Biological Sciences, Goethe University Frankfurt, Frankfurt, Germany

characteristic: Submitter Id

text: < 24

unit: hour

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text: Protocols: For each sample, all living daphnids were picked from the beaker due to reduce effects caused by dead cells. They were carefully and with a small amount of solution transferred to a screw-cap eppendorf containing a mixture of glass beads. Right after all the daphnids from each beaker were transferred, solution was removed and individuals were simultaniously euthanized in liquid nitrogen. Together with 350 µl of RP1 buffer ((NucleoSpin RNA Protein kit; Macherey-Nagel 740933.250) the samples were mechanically homogenized (See: Nucleic acid extraction protocol). RP1 buffer was freshly prepared with TCEP as reducing agent prior extraction. Origin of the daphnids is the German Federal Environmental Agency, Institut für Wasser,- Boden- und Lufthygiene. The adult daphnids were fed daily with an algal suspension (Desmodesmus subspicatus) and ArtemioFluid (JLB GmbH & Co. KG). Before test start, 3 weeks old daphnids (30 to 50) were separated from the stock population into a 1.8 L beaker containing copper-reduced tap water. On the test day, newborn D. magna were separated by sieving. In order to use only healthy daphnids, the newborn ones were transferred into the test solutions few hours after separation. Fipronil (CAS 120068-37-3, ≥ 95 % purity) was purchased from Merck KGgA (Darmstadt, Germany). Test solutions were freshly prepared one day prior the start of the experiment and stored at room temperature in the dark while being constantly aerated. The glass beakers for the incubation of the embryos were pre-saturated with the respective test solution overnight and renewed at the beginning of the experiment. Per sample, about 100-150 daphnids were pre-picked in small glass beakers (30-50 ml) filled with ~ 20 ml of the testing solution. Based on visual observation, only healthy individuals were selected for the test. Using a plastic Pasteur pipette, 50 juvenile D. magna were transferred into the test glass beaker (250 ml, filled with 150 ml of the respective test solution (Control, Low exposure, High exposure). Daphnids were incubated at 22 +/- 1°C on a 8:16 h light/dark cycle. For a constant and even temperature distribution, all glass beakers were placed in a water filled white plastic box. Glass beakers were covered with a glass plate to avoid evaporation. The solution’s pH and O2 was measured before and after the test. At 24 hours post test start, daphnids were inspected visually and dead or daphnids with abnormal behavior were noted. At 48 after test start, overall survival, abnormal behavior, morphological malformations, and physiological changes were recorded before RNA and protein extraction. Bead tubes for homogenization were filled with a mixture of sterile glass beads of 0.1 to 0.5 mm diameter. Tissue homogenization was performed at 5 m/s for 10 s with FastPrep-24© (MP Biomedicals, 6004500) at room temperature. From here on total RNA and Protein was extracted from the tissue lysate using the NucleoSpin RNA Protein kit (Macherey-Nagel, 740933.250) according to the manufacturer’s protocol. RNA concentration (>50 ng/µl) was measured using a Nanodrop 2000 spectrophotometer (Thermo Scientific). The sample’s overall RNA quality and corresponding 28S/18S ratio was fluorometrically determined with a 2100 Bioanalyzer© Instrument system (Agilent, G2939BA) using the Agilent RNA 6000 Pico Kit© (Agilent, 5067-1511) according to the manufacturer’s protocol. Only samples with a 28S to 18S ratio > 2 (reflecting good quality through intact rRNA units) were used for downstream analysis. Samples were stored at -80°C until they were sent to the sequencing facility on dry ice. Sequencing libraries were prepared for each sample from 50 ng/µl total RNA at the sequencing facility “NGS-Services for Integrative Genomics” at the University of Göttingen in Germany. According to their standard workflow, cDNA libraries were prepared from protein coding mRNA that were purified through PolyA selection using the TruSeq RNA Library Prep Kit v2 (Illumina). Libraries were validated using a Fragment Analyzer system (Agilent, Santa Clara, USA) before sequencing.

characteristic: description

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text: Daphnia magna

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text: not available

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text: Fraunhofer Attract Eco'n'OMICs, Fraunhofer Institute for Molecular Biology and Applied Ecology, Schmallenberg, Germany Evolutionary Ecology and Environmental Toxicology, Faculty Biological Sciences, Goethe University Frankfurt, Frankfurt, Germany

characteristic: INSDC center name

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text: Protocols: For each sample, all living daphnids were picked from the beaker due to reduce effects caused by dead cells. They were carefully and with a small amount of solution transferred to a screw-cap eppendorf containing a mixture of glass beads. Right after all the daphnids from each beaker were transferred, solution was removed and individuals were simultaniously euthanized in liquid nitrogen. Together with 350 µl of RP1 buffer ((NucleoSpin RNA Protein kit; Macherey-Nagel 740933.250) the samples were mechanically homogenized (See: Nucleic acid extraction protocol). RP1 buffer was freshly prepared with TCEP as reducing agent prior extraction. Origin of the daphnids is the German Federal Environmental Agency, Institut für Wasser,- Boden- und Lufthygiene. The adult daphnids were fed daily with an algal suspension (Desmodesmus subspicatus) and ArtemioFluid (JLB GmbH & Co. KG). Before test start, 3 weeks old daphnids (30 to 50) were separated from the stock population into a 1.8 L beaker containing copper-reduced tap water. On the test day, newborn D. magna were separated by sieving. In order to use only healthy daphnids, the newborn ones were transferred into the test solutions few hours after separation. Imidacloprid (CAS 138261-41-3, ≥ 95 % purity) was purchased from Merck KGgA (Darmstadt, Germany). Test solutions were freshly prepared one day prior the start of the experiment and stored at room temperature in the dark while being constantly aerated. The glass beakers for the incubation of the embryos were pre-saturated with the respective test solution overnight and renewed at the beginning of the experiment. Per sample, about 100-150 daphnids were pre-picked in small glass beakers (30-50 ml) filled with ~ 20 ml of the testing solution. Based on visual observation, only healthy individuals were selected for the test. Using a plastic Pasteur pipette, 50 juvenile D. magna were transferred into the test glass beaker (250 ml, filled with 150 ml of the respective test solution (Control, Low exposure, High exposure). Daphnids were incubated at 22 +/- 1°C on a 8:16 h light/dark cycle. For a constant and even temperature distribution, all glass beakers were placed in a water filled white plastic box. Glass beakers were covered with a glass plate to avoid evaporation. The solution’s pH and O2 was measured before and after the test. At 24 hours post test start, daphnids were inspected visually and dead or daphnids with abnormal behavior were noted. At 48 after test start, overall survival, abnormal behavior, morphological malformations, and physiological changes were recorded before RNA and protein extraction. Bead tubes for homogenization were filled with a mixture of sterile glass beads of 0.1 to 0.5 mm diameter. Tissue homogenization was performed at 5 m/s for 10 s with FastPrep-24© (MP Biomedicals, 6004500) at room temperature. From here on total RNA and Protein was extracted from the tissue lysate using the NucleoSpin RNA Protein kit (Macherey-Nagel, 740933.250) according to the manufacturer’s protocol. RNA concentration (>50 ng/µl) was measured using a Nanodrop 2000 spectrophotometer (Thermo Scientific). The sample’s overall RNA quality and corresponding 28S/18S ratio was fluorometrically determined with a 2100 Bioanalyzer© Instrument system (Agilent, G2939BA) using the Agilent RNA 6000 Pico Kit© (Agilent, 5067-1511) according to the manufacturer’s protocol. Only samples with a 28S to 18S ratio > 2 (reflecting good quality through intact rRNA units) were used for downstream analysis. Samples were stored at -80°C until they were sent to the sequencing facility on dry ice. Sequencing libraries were prepared for each sample from 50 ng/µl total RNA at the sequencing facility “NGS-Services for Integrative Genomics” at the University of Göttingen in Germany. According to their standard workflow, cDNA libraries were prepared from protein coding mRNA that were purified through PolyA selection using the TruSeq RNA Library Prep Kit v2 (Illumina). Libraries were validated using a Fragment Analyzer system (Agilent, Santa Clara, USA) before sequencing.

text: juvenile stage

text: wild type genotype

text: Daphnia magna

characteristic: organism

text: Daphnia magna

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text: juvenile stage

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text: ESALQ/USP

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text: Replicate 3 of roots of the sugarcane cultivar RB855536 submitted to Drought treatment during five days in a row

text: Brazil

characteristic: geographic location (country and/or sea)

text: Controlled enviorement (Greenhouse)

characteristic: isolation and growth condition

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text: Saccharum hybrid cultivar RB867515

text: Four months

text: Root

text: Saccharum hybrid cultivar RB867515


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text: Brazil

text: Controlled enviorement (Greenhouse)

text: Saccharum hybrid cultivar

text: Four months

text: Root

text: Saccharum hybrid cultivar


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text: Replicate 3 of roots of the sugarcane cultivar RB867515 submitted to Control treatment during five days in a row

text: Brazil

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text: Controlled enviorement (Greenhouse)

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text: Saccharum hybrid cultivar RB867515

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text: Saccharum hybrid cultivar RB867515


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text: Replicate 3 of roots of the sugarcane cultivar RB92579 submitted to Drought treatment during five days in a row

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text: Replicate 2 of roots of the sugarcane cultivar SP80-3280 submitted to Drought treatment during five days in a row

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text: Controlled enviorement (Greenhouse)

text: Saccharum hybrid cultivar SP80-3280

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text: Root

text: Saccharum hybrid cultivar SP80-3280

characteristic: title


text: ESALQ/USP

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text: Replicate 3 of roots of the sugarcane cultivar RB867515 submitted to Drought treatment during five days in a row

text: Brazil

text: Controlled enviorement (Greenhouse)

text: Saccharum hybrid cultivar RB867515

text: Four months

text: Root

text: Saccharum hybrid cultivar RB867515


text: ESALQ/USP

text: public

text: Replicate 2 of roots of the sugarcane cultivar RB855113 submitted to Control treatment during five days in a row

text: Brazil

characteristic: geographic location (country and/or sea)

text: Controlled enviorement (Greenhouse)

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text: Saccharum hybrid cultivar

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text: Saccharum hybrid cultivar


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ESALQ/USP

text: public

text: Replicate 3 of roots of the sugarcane cultivar SP79-1011 submitted to Drought treatment during five days in a row

text: Brazil

text: Controlled enviorement (Greenhouse)

text: Saccharum hybrid cultivar

text: Four months

characteristic: plant growth medium

text: Root

characteristic: plant structure

text: Saccharum hybrid cultivar


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ESALQ/USP

text: public

characteristic: Submitter Id

text: Replicate 3 of roots of the sugarcane cultivar RB855536 submitted to Control treatment during five days in a row

characteristic: description

text: Brazil

text: Controlled enviorement (Greenhouse)

text: Saccharum hybrid cultivar

text: Four months

text: Root

text: Saccharum hybrid cultivar


text: ESALQ/USP

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Replicate 2 of roots of the sugarcane cultivar SP79-1011 submitted to Drought treatment during five days in a row

characteristic: genotype

text: Brazil

text: Controlled enviorement (Greenhouse)

text: Saccharum hybrid cultivar

text: Four months

text: Root

text: Saccharum hybrid cultivar

characteristic: title


text: ESALQ/USP

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: common name

text: Replicate 3 of roots of the sugarcane cultivar SP80-3280 submitted to Control treatment during five days in a row

text: Brazil

text: Controlled enviorement (Greenhouse)

text: Saccharum hybrid cultivar SP80-3280

text: Four months

text: Root

text: Saccharum hybrid cultivar SP80-3280


text: ESALQ/USP

text: public

text: Replicate 1 of roots of the sugarcane cultivar RB855113 submitted to Control treatment during five days in a row

text: Brazil

characteristic: geographic location (country and/or sea)

text: Controlled enviorement (Greenhouse)

characteristic: isolation and growth condition

text: Saccharum hybrid cultivar

characteristic: organism

text: Four months

characteristic: plant developmental stage

text: Root

text: Saccharum hybrid cultivar


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ESALQ/USP

text: public

text: Replicate 1 of roots of the sugarcane cultivar RB92579 submitted to Control treatment during five days in a row

text: Brazil

text: Controlled enviorement (Greenhouse)

text: Saccharum hybrid cultivar

text: Four months

characteristic: plant growth medium

text: Root

characteristic: plant structure

text: Saccharum hybrid cultivar


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ESALQ/USP

text: public

characteristic: Submitter Id

text: Replicate 2 of roots of the sugarcane cultivar RB92579 submitted to Drought treatment during five days in a row

characteristic: description

text: Brazil

text: Controlled enviorement (Greenhouse)

text: Saccharum hybrid cultivar

text: Four months

text: Root

text: Saccharum hybrid cultivar


text: ESALQ/USP

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Replicate 1 of roots of the sugarcane cultivar SP80-3280 submitted to Drought treatment during five days in a row

characteristic: genotype

text: Brazil

text: Controlled enviorement (Greenhouse)

text: Saccharum hybrid cultivar SP80-3280

text: Four months

text: Root

text: Saccharum hybrid cultivar SP80-3280

characteristic: title


text: ESALQ/USP

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: common name

text: Replicate 2 of roots of the sugarcane cultivar RB855536 submitted to Control treatment during five days in a row

text: Brazil

text: Controlled enviorement (Greenhouse)

text: Saccharum hybrid cultivar

text: Four months

text: Root

text: Saccharum hybrid cultivar


text: ESALQ/USP

text: public

text: Replicate 3 of roots of the sugarcane cultivar RB855113 submitted to Drought treatment during five days in a row

text: Brazil

characteristic: geographic location (country and/or sea)

text: Controlled enviorement (Greenhouse)

characteristic: isolation and growth condition

text: Saccharum hybrid cultivar

characteristic: organism

text: Four months

characteristic: plant developmental stage

text: Soil mixture having 80% sand and 20% commercial substrate

text: Root

text: Saccharum hybrid cultivar


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ESALQ/USP

text: public

text: Replicate 2 of roots of the sugarcane cultivar RB867515 submitted to Control treatment during five days in a row

text: Brazil

text: Controlled enviorement (Greenhouse)

text: Saccharum hybrid cultivar RB867515

text: Four months

characteristic: plant growth medium

text: Root

characteristic: plant structure

text: Saccharum hybrid cultivar RB867515


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IMPERIAL COLLEGE LONDON

text: public

tag: Namespace:IMPERIAL COLLEGE LONDON

characteristic: Submitter Id

text: Salmonella Typhimurium strain 12023/14028 was evolved for 10 cycles of: 1) overnights grown in LB prior to infection; 2) 24h infection of BMDM (MOI 40) + 23.5h cefotaxime teatment 100 ug/mL; 3) recovery in LB until stationary phase

characteristic: description

text: Salmonella enterica subsp. enterica serovar Typhimurium


text: IMPERIAL COLLEGE LONDON

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: house mouse

text: Dual RNA-Seq of cefotaxime-treated mouse macrophages infected with transcriptionally/translationally active non-growing wild type Salmonella enterica serovar Typhimurium

text: Mus musculus

text: Mus musculus

characteristic: title


text: IMPERIAL COLLEGE LONDON

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: house mouse

text: Dual RNA-Seq of cefotaxime-treated mouse macrophages infected with transcriptionally/translationally active non-growing purA Salmonella enterica serovar Typhimurium

text: Mus musculus

text: Mus musculus


text: ROBERT KOCH INSTITUTE

text: public

text: DEU

tag: Namespace:ROBERT KOCH INSTITUTE

characteristic: collection date

text: Salmonella

characteristic: genus

text: Germany

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: host

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

characteristic: isolate

text: stool

characteristic: isolation source

text: gastrointestinal system

text: Salmonella enterica subsp. enterica

text: Salmonella enterica subsp. enterica

text: Anatum

characteristic: serovar

text: Salmonella enterica serovar Anatum

type: AMR curated data - CABBAGE

value: cefoxitin

value: broth dilution

value: mg/L

value: Salmonella enterica

value: meropenem

value: trimethoprim-sulfamethoxazole

value: cefotaxime

value: ceftazidime

value: nalidixic acid

value: ciprofloxacin

value: ampicillin


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ROBERT KOCH INSTITUTE

text: public

text: DEU

characteristic: Submitter Id

text: Salmonella

text: Germany

text: Homo sapiens

text: not provided

text: Homo sapiens

text: stool

text: gastrointestinal system

text: Salmonella enterica subsp. enterica

characteristic: organism

text: Salmonella enterica subsp. enterica

text: Senftenberg

text: Salmonella enterica serovar Senftenberg


text: IMPERIAL COLLEGE LONDON

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Salmonella Typhimurium strain 12023/14028 was evolved for 8 cycles of: 1) overnights grown in LB prior to infection; 2) 24h infection of BMDM (MOI 10) + 23.5h cefotaxime teatment 100 ug/mL; 3) recovery in LB until stationary phase

characteristic: description

characteristic: title


text: IMPERIAL COLLEGE LONDON

text: public

characteristic: SRA accession

text: Salmonella Typhimurium strain 12023/14028 was evolved for 8 cycles of: 1) overnights grown in MgMES pH 5.0 prior to infection; 48h infection of BMDM (MOI 10) + 47.5h cefotaxime teatment 100 ug/mL; 3) recovery in LB until stationary phase


text: public

tag: Namespace:MRC-University of Glasgow Centre for Virus Research

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens


text: MRC-University of Glasgow Centre for Virus Research

text: public

text: human

text: Homo sapiens

text: Homo sapiens


text: UNIVERSITY OF CAMBRIDGE

text: public

tag: Namespace:UNIVERSITY OF CAMBRIDGE

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: healthy

characteristic: host health state

text: Mus musculus

characteristic: host scientific name

characteristic: isolate

text: Mouse faeces

text: 52.07944 0.18467

characteristic: lat lon

text: Lachnospiraceae bacterium

text: The Mouse Microbial Genome Collection

characteristic: project name

text: Lachnospiraceae bacterium


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF CAMBRIDGE

text: public

characteristic: Submitter Id

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

characteristic: isolation source

text: 52.07944 0.18467

text: Muribaculaceae bacterium

text: The Mouse Microbial Genome Collection

text: Muribaculaceae bacterium


text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Bacteroidales bacterium

characteristic: organism

text: The Mouse Microbial Genome Collection

text: Bacteroidales bacterium


text: UNIVERSITY OF CAMBRIDGE

text: public

characteristic: SRA accession

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Phocaeicola vulgatus

text: The Mouse Microbial Genome Collection

text: Phocaeicola vulgatus

characteristic: title


text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

characteristic: host health state

text: Mus musculus

characteristic: host scientific name

characteristic: isolate

text: Mouse faeces

text: 52.07944 0.18467

characteristic: lat lon

text: Lactobacillus murinus

text: The Mouse Microbial Genome Collection

text: Lactobacillus murinus


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Parabacteroides goldsteinii

text: The Mouse Microbial Genome Collection

characteristic: project name

text: Parabacteroides goldsteinii


characteristic: External Id

text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

characteristic: isolation source

text: 52.07944 0.18467

text: Coriobacteriaceae bacterium

text: The Mouse Microbial Genome Collection

text: Coriobacteriaceae bacterium


text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Bacteroides acidifaciens

characteristic: organism

text: The Mouse Microbial Genome Collection

text: Bacteroides acidifaciens


text: UNIVERSITY OF CAMBRIDGE

text: public

characteristic: SRA accession

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Lactobacillus intestinalis

text: The Mouse Microbial Genome Collection

text: Lactobacillus intestinalis

characteristic: title


text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

characteristic: host health state

text: Mus musculus

characteristic: host scientific name

characteristic: isolate

text: Mouse faeces

text: 52.07944 0.18467

characteristic: lat lon

text: Parabacteroides distasonis

text: The Mouse Microbial Genome Collection

text: Parabacteroides distasonis


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Blautia coccoides

text: The Mouse Microbial Genome Collection

characteristic: project name

text: Blautia coccoides


characteristic: External Id

text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

characteristic: isolation source

text: 52.07944 0.18467

text: Enterococcus gallinarum

text: The Mouse Microbial Genome Collection

text: Enterococcus gallinarum


text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Proteus mirabilis

characteristic: organism

text: The Mouse Microbial Genome Collection

text: Proteus mirabilis


text: UNIVERSITY OF CAMBRIDGE

text: public

characteristic: SRA accession

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Klebsiella pneumoniae

text: The Mouse Microbial Genome Collection

text: Klebsiella pneumoniae

characteristic: title


text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

characteristic: host health state

text: Mus musculus

characteristic: host scientific name

characteristic: isolate

text: Mouse faeces

text: 52.07944 0.18467

characteristic: lat lon

text: Citrobacter rodentium

text: The Mouse Microbial Genome Collection

text: Citrobacter rodentium


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Escherichia coli

text: The Mouse Microbial Genome Collection

characteristic: project name

text: Escherichia coli


characteristic: External Id

text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

characteristic: isolation source

text: 52.07944 0.18467

text: Staphylococcus xylosus

text: The Mouse Microbial Genome Collection

text: Staphylococcus xylosus


text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Lachnospiraceae bacterium

characteristic: organism

text: The Mouse Microbial Genome Collection

text: Lachnospiraceae bacterium


text: UNIVERSITY OF CAMBRIDGE

text: public

characteristic: SRA accession

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Lactobacillus reuteri

text: The Mouse Microbial Genome Collection

text: Lactobacillus reuteri

characteristic: title


text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

characteristic: host health state

text: Mus musculus

characteristic: host scientific name

characteristic: isolate

text: Mouse faeces

text: 52.07944 0.18467

characteristic: lat lon

text: Enterococcus faecalis

text: The Mouse Microbial Genome Collection

text: Enterococcus faecalis


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Lactobacillus johnsonii

text: The Mouse Microbial Genome Collection

characteristic: project name

text: Lactobacillus johnsonii


characteristic: External Id

text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

characteristic: isolation source

text: 52.07944 0.18467

text: Muribaculaceae bacterium

text: The Mouse Microbial Genome Collection

text: Muribaculaceae bacterium


text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Parabacteroides goldsteinii

characteristic: organism

text: The Mouse Microbial Genome Collection

text: Parabacteroides goldsteinii


text: UNIVERSITY OF CAMBRIDGE

text: public

characteristic: SRA accession

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Eubacteriaceae bacterium

text: The Mouse Microbial Genome Collection

text: Eubacteriaceae bacterium

characteristic: title


text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

characteristic: host health state

text: Mus musculus

characteristic: host scientific name

characteristic: isolate

text: Mouse faeces

text: 52.07944 0.18467

characteristic: lat lon

text: Alistipes timonensis

text: The Mouse Microbial Genome Collection

text: Alistipes timonensis


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Clostridia bacterium

text: The Mouse Microbial Genome Collection

characteristic: project name

text: Clostridia bacterium


characteristic: External Id

text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

characteristic: isolation source

text: 52.07944 0.18467

text: Bacteroidales bacterium

text: The Mouse Microbial Genome Collection

text: Bacteroidales bacterium


text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Lactobacillus intestinalis

characteristic: organism

text: The Mouse Microbial Genome Collection

text: Lactobacillus intestinalis


text: UNIVERSITY OF CAMBRIDGE

text: public

characteristic: SRA accession

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Lactobacillus murinus

text: The Mouse Microbial Genome Collection

text: Lactobacillus murinus

characteristic: title


text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

characteristic: host health state

text: Mus musculus

characteristic: host scientific name

characteristic: isolate

text: Mouse faeces

text: 52.07944 0.18467

characteristic: lat lon

text: Burkholderiaceae bacterium

text: The Mouse Microbial Genome Collection

text: Burkholderiaceae bacterium


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Duncaniella muris

text: The Mouse Microbial Genome Collection

characteristic: project name

text: Duncaniella muris


characteristic: External Id

text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

characteristic: isolation source

text: 52.07944 0.18467

text: Faecalibaculum rodentium

text: The Mouse Microbial Genome Collection

text: Faecalibaculum rodentium


text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Muribaculum intestinale

characteristic: organism

text: The Mouse Microbial Genome Collection

text: Muribaculum intestinale


text: UNIVERSITY OF CAMBRIDGE

text: public

characteristic: SRA accession

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Coriobacteriales bacterium

text: The Mouse Microbial Genome Collection

text: Coriobacteriales bacterium

characteristic: title


text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

characteristic: host health state

text: Mus musculus

characteristic: host scientific name

characteristic: isolate

text: Mouse faeces

text: 52.07944 0.18467

characteristic: lat lon

text: Lachnospiraceae bacterium

text: The Mouse Microbial Genome Collection

text: Lachnospiraceae bacterium


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Adlercreutzia caecimuris

text: The Mouse Microbial Genome Collection

characteristic: project name

text: Adlercreutzia caecimuris


characteristic: External Id

text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

characteristic: isolation source

text: 52.07944 0.18467

text: Lactobacillus reuteri

text: The Mouse Microbial Genome Collection

text: Lactobacillus reuteri


text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Parabacteroides distasonis

characteristic: organism

text: The Mouse Microbial Genome Collection

text: Parabacteroides distasonis


text: UNIVERSITY OF CAMBRIDGE

text: public

characteristic: SRA accession

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Oscillospiraceae bacterium

text: The Mouse Microbial Genome Collection

text: Oscillospiraceae bacterium

characteristic: title


text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

characteristic: host health state

text: Mus musculus

characteristic: host scientific name

characteristic: isolate

text: Mouse faeces

text: 52.07944 0.18467

characteristic: lat lon

text: Turicimonas muris

text: The Mouse Microbial Genome Collection

text: Turicimonas muris


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Eubacteriaceae bacterium

text: The Mouse Microbial Genome Collection

characteristic: project name

text: Eubacteriaceae bacterium


characteristic: External Id

text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

characteristic: isolation source

text: 52.07944 0.18467

text: Bacteroides caecimuris

text: The Mouse Microbial Genome Collection

text: Bacteroides caecimuris


text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Clostridia bacterium

characteristic: organism

text: The Mouse Microbial Genome Collection

text: Clostridia bacterium


text: UNIVERSITY OF CAMBRIDGE

text: public

characteristic: SRA accession

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Clostridiaceae bacterium

text: The Mouse Microbial Genome Collection

text: Clostridiaceae bacterium

characteristic: title


text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

characteristic: host health state

text: Mus musculus

characteristic: host scientific name

characteristic: isolate

text: Mouse faeces

text: 52.07944 0.18467

characteristic: lat lon

text: Staphylococcus nepalensis

text: The Mouse Microbial Genome Collection

text: Staphylococcus nepalensis


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Streptococcaceae bacterium

text: The Mouse Microbial Genome Collection

characteristic: project name

text: Streptococcaceae bacterium


characteristic: External Id

text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

characteristic: isolation source

text: 52.07944 0.18467

text: Bifidobacterium animalis

text: The Mouse Microbial Genome Collection

text: Bifidobacterium animalis


text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Bacteroidales bacterium

characteristic: organism

text: The Mouse Microbial Genome Collection

text: Bacteroidales bacterium


text: UNIVERSITY OF CAMBRIDGE

text: public

characteristic: SRA accession

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Ruminococcaceae bacterium

text: The Mouse Microbial Genome Collection

text: Ruminococcaceae bacterium

characteristic: title


text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

characteristic: host health state

text: Mus musculus

characteristic: host scientific name

characteristic: isolate

text: Mouse faeces

text: 52.07944 0.18467

characteristic: lat lon

text: Granulicatella adiacens

text: The Mouse Microbial Genome Collection

text: Granulicatella adiacens


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Enterocloster clostridioformis

text: The Mouse Microbial Genome Collection

characteristic: project name

text: Enterocloster clostridioformis


characteristic: External Id

text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

characteristic: isolation source

text: 52.07944 0.18467

text: Acutalibacter muris

text: The Mouse Microbial Genome Collection

text: Acutalibacter muris


text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Lachnospiraceae bacterium

characteristic: organism

text: The Mouse Microbial Genome Collection

text: Lachnospiraceae bacterium


text: UNIVERSITY OF CAMBRIDGE

text: public

characteristic: SRA accession

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Lactobacillus reuteri

text: The Mouse Microbial Genome Collection

text: Lactobacillus reuteri

characteristic: title


text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

characteristic: host health state

text: Mus musculus

characteristic: host scientific name

characteristic: isolate

text: Mouse faeces

text: 52.07944 0.18467

characteristic: lat lon

text: Bifidobacterium pseudolongum subsp. globosum

text: The Mouse Microbial Genome Collection


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Bacteroides acidifaciens

text: The Mouse Microbial Genome Collection

characteristic: project name

text: Bacteroides acidifaciens


characteristic: External Id

text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

characteristic: isolation source

text: 52.07944 0.18467

text: Adlercreutzia caecimuris

text: The Mouse Microbial Genome Collection

text: Adlercreutzia caecimuris


text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Duncaniella muris

characteristic: organism

text: The Mouse Microbial Genome Collection

text: Duncaniella muris


text: UNIVERSITY OF CAMBRIDGE

text: public

characteristic: SRA accession

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Eggerthellaceae bacterium

text: The Mouse Microbial Genome Collection

text: Eggerthellaceae bacterium

characteristic: title


text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

characteristic: host health state

text: Mus musculus

characteristic: host scientific name

characteristic: isolate

text: Mouse faeces

text: 52.07944 0.18467

characteristic: lat lon

text: Oscillospiraceae bacterium

text: The Mouse Microbial Genome Collection

text: Oscillospiraceae bacterium


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Clostridiaceae bacterium

text: The Mouse Microbial Genome Collection

characteristic: project name

text: Clostridiaceae bacterium


characteristic: External Id

text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

characteristic: isolation source

text: 52.07944 0.18467

text: Staphylococcus warneri

text: The Mouse Microbial Genome Collection

text: Staphylococcus warneri


text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Muribaculum intestinale

characteristic: organism

text: The Mouse Microbial Genome Collection

text: Muribaculum intestinale


text: UNIVERSITY OF CAMBRIDGE

text: public

characteristic: SRA accession

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Eubacteriaceae bacterium

text: The Mouse Microbial Genome Collection

text: Eubacteriaceae bacterium

characteristic: title


text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

characteristic: host health state

text: Mus musculus

characteristic: host scientific name

characteristic: isolate

text: Mouse faeces

text: 52.07944 0.18467

characteristic: lat lon

text: Clostridia bacterium

text: The Mouse Microbial Genome Collection

text: Clostridia bacterium


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Erysipelotrichales bacterium

text: The Mouse Microbial Genome Collection

characteristic: project name

text: Erysipelotrichales bacterium


characteristic: External Id

text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

characteristic: isolation source

text: 52.07944 0.18467

text: Lactobacillus intestinalis

text: The Mouse Microbial Genome Collection

text: Lactobacillus intestinalis


text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Bacteroidales bacterium

characteristic: organism

text: The Mouse Microbial Genome Collection

text: Bacteroidales bacterium


text: UNIVERSITY OF CAMBRIDGE

text: public

characteristic: SRA accession

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Desulfovibrionaceae bacterium

text: The Mouse Microbial Genome Collection

text: Desulfovibrionaceae bacterium

characteristic: title


text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

characteristic: host health state

text: Mus musculus

characteristic: host scientific name

characteristic: isolate

text: Mouse faeces

text: 52.07944 0.18467

characteristic: lat lon

text: Lachnospiraceae bacterium

text: The Mouse Microbial Genome Collection

text: Lachnospiraceae bacterium


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Ruminococcaceae bacterium

text: The Mouse Microbial Genome Collection

characteristic: project name

text: Ruminococcaceae bacterium


characteristic: External Id

text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

characteristic: isolation source

text: 52.07944 0.18467

text: Streptococcus oralis

text: The Mouse Microbial Genome Collection

text: Streptococcus oralis


text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Bacteroides acidifaciens

characteristic: organism

text: The Mouse Microbial Genome Collection

text: Bacteroides acidifaciens


text: UNIVERSITY OF CAMBRIDGE

text: public

characteristic: SRA accession

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Lactobacillus murinus

text: The Mouse Microbial Genome Collection

text: Lactobacillus murinus

characteristic: title


text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

characteristic: host health state

text: Mus musculus

characteristic: host scientific name

characteristic: isolate

text: Mouse faeces

text: 52.07944 0.18467

characteristic: lat lon

text: Coriobacteriaceae bacterium

text: The Mouse Microbial Genome Collection

text: Coriobacteriaceae bacterium


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Atopobiaceae bacterium

text: The Mouse Microbial Genome Collection

characteristic: project name

text: Atopobiaceae bacterium


characteristic: External Id

text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

characteristic: isolation source

text: 52.07944 0.18467

text: Flavobacteriales bacterium

text: The Mouse Microbial Genome Collection

text: Flavobacteriales bacterium


text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Bacillus licheniformis

characteristic: organism

text: The Mouse Microbial Genome Collection

text: Bacillus licheniformis


text: UNIVERSITY OF CAMBRIDGE

text: public

characteristic: SRA accession

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Oscillospiraceae bacterium

text: The Mouse Microbial Genome Collection

text: Oscillospiraceae bacterium

characteristic: title


text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

characteristic: host health state

text: Mus musculus

characteristic: host scientific name

characteristic: isolate

text: Mouse faeces

text: 52.07944 0.18467

characteristic: lat lon

text: Clostridiaceae bacterium

text: The Mouse Microbial Genome Collection

text: Clostridiaceae bacterium


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Eubacteriaceae bacterium

text: The Mouse Microbial Genome Collection

characteristic: project name

text: Eubacteriaceae bacterium


characteristic: External Id

text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

characteristic: isolation source

text: 52.07944 0.18467

text: Staphylococcus pasteuri

text: The Mouse Microbial Genome Collection

text: Staphylococcus pasteuri


text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Eggerthellaceae bacterium

characteristic: organism

text: The Mouse Microbial Genome Collection

text: Eggerthellaceae bacterium


text: UNIVERSITY OF CAMBRIDGE

text: public

characteristic: SRA accession

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Lactobacillus johnsonii

text: The Mouse Microbial Genome Collection

text: Lactobacillus johnsonii

characteristic: title


text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

characteristic: host health state

text: Mus musculus

characteristic: host scientific name

characteristic: isolate

text: Mouse faeces

text: 52.07944 0.18467

characteristic: lat lon

text: Staphylococcus epidermidis

text: The Mouse Microbial Genome Collection

text: Staphylococcus epidermidis


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Lactobacillus reuteri

text: The Mouse Microbial Genome Collection

characteristic: project name

text: Lactobacillus reuteri


characteristic: External Id

text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

characteristic: isolation source

text: 52.07944 0.18467

text: Erysipelotrichales bacterium

text: The Mouse Microbial Genome Collection

text: Erysipelotrichales bacterium


text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Clostridia bacterium

characteristic: organism

text: The Mouse Microbial Genome Collection

text: Clostridia bacterium


text: UNIVERSITY OF CAMBRIDGE

text: public

characteristic: SRA accession

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Lachnospiraceae bacterium

text: The Mouse Microbial Genome Collection

text: Lachnospiraceae bacterium

characteristic: title


text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

characteristic: host health state

text: Mus musculus

characteristic: host scientific name

characteristic: isolate

text: Mouse faeces

text: 52.07944 0.18467

characteristic: lat lon

text: Staphylococcus nepalensis

text: The Mouse Microbial Genome Collection

text: Staphylococcus nepalensis


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Ruminococcaceae bacterium

text: The Mouse Microbial Genome Collection

characteristic: project name

text: Ruminococcaceae bacterium


characteristic: External Id

text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

characteristic: isolation source

text: 52.07944 0.18467

text: Granulicatella adiacens

text: The Mouse Microbial Genome Collection

text: Granulicatella adiacens


text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Enterocloster clostridioformis

characteristic: organism

text: The Mouse Microbial Genome Collection

text: Enterocloster clostridioformis


text: UNIVERSITY OF CAMBRIDGE

text: public

characteristic: SRA accession

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Atopobiaceae bacterium

text: The Mouse Microbial Genome Collection

text: Atopobiaceae bacterium

characteristic: title


text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

characteristic: host health state

text: Mus musculus

characteristic: host scientific name

characteristic: isolate

text: Mouse faeces

text: 52.07944 0.18467

characteristic: lat lon

text: Blautia coccoides

text: The Mouse Microbial Genome Collection

text: Blautia coccoides


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Acutalibacter muris

text: The Mouse Microbial Genome Collection

characteristic: project name

text: Acutalibacter muris


characteristic: External Id

text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

characteristic: isolation source

text: 52.07944 0.18467

text: Cutibacterium acnes

text: The Mouse Microbial Genome Collection

text: Cutibacterium acnes


text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Parabacteroides distasonis

characteristic: organism

text: The Mouse Microbial Genome Collection

text: Parabacteroides distasonis


text: UNIVERSITY OF CAMBRIDGE

text: public

characteristic: SRA accession

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Clostridiaceae bacterium

text: The Mouse Microbial Genome Collection

text: Clostridiaceae bacterium

characteristic: title


text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

characteristic: host health state

text: Mus musculus

characteristic: host scientific name

characteristic: isolate

text: Mouse faeces

text: 52.07944 0.18467

characteristic: lat lon

text: Muribaculum intestinale

text: The Mouse Microbial Genome Collection

text: Muribaculum intestinale


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

text: Mus musculus

text: Fergi

text: Mouse faeces

text: 52.07944 0.18467

text: Escherichia coli

text: The Mouse Microbial Genome Collection

characteristic: project name

text: Escherichia coli


characteristic: External Id

text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

characteristic: isolation source

text: 52.07944 0.18467

text: Escherichia coli

text: The Mouse Microbial Genome Collection

text: Escherichia coli


text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Lactobacillus intestinalis

characteristic: organism

text: The Mouse Gut Bacterial Catalogue

text: Lactobacillus intestinalis


text: UNIVERSITY OF CAMBRIDGE

text: public

characteristic: SRA accession

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Lachnospiraceae bacterium

text: The Mouse Gut Bacterial Catalogue

text: Lachnospiraceae bacterium

characteristic: title


text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

characteristic: host health state

text: Mus musculus

characteristic: host scientific name

characteristic: isolate

text: Mouse faeces

text: 52.07944 0.18467

characteristic: lat lon

text: Bacteroides acidifaciens

text: The Mouse Gut Bacterial Catalogue

text: Bacteroides acidifaciens


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF CAMBRIDGE

text: public

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Eubacteriaceae bacterium

text: The Mouse Gut Bacterial Catalogue

characteristic: project name

text: Eubacteriaceae bacterium


characteristic: External Id

text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

characteristic: isolation source

text: 52.07944 0.18467

text: Cutibacterium acnes

text: The Mouse Gut Bacterial Catalogue

text: Cutibacterium acnes


text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: United Kingdom

text: healthy

text: Mus musculus

text: Mouse faeces

text: 52.07944 0.18467

text: Phocaeicola vulgatus

characteristic: organism

text: The Mouse Gut Bacterial Catalogue

text: Phocaeicola vulgatus


text: Plasmodium falciparum

characteristic: ArrayExpress-SPECIES

text: SC

text: public

characteristic: SRA accession

text: malaria parasite P. falciparum

characteristic: common name

text: Plasmodium falciparum

text: Plasmodium falciparum

characteristic: subject id

characteristic: title


E-MTAB-9839:Sample 1

characteristic: ENA-CHECKLIST

text: IMPERIAL COLLEGE LONDON

text: public

text: E-MTAB-9839:Sample 1

unit: week

characteristic: age

text: ArrayExpress

characteristic: broker name

text: fibroblast

characteristic: cell type

text: house mouse

text: Protocols: Eight-week-old wild-type C57BL/6 mice were subjected to pressure overload by means of transverse aortic constriction. Cardiac fibroblasts were isolated from heart ventricles 0, 1, and 3 days after the operation (cells from three mice were pooled in each sample). PI-, Fixable Viability Dye eFluor 450- CD45- CD31- MEFSK4+ single cells were sorted by FACS. processed for single-cell RNA sequencing analysis. Chromium 10X Genomics platform was used and approximately 15000 sorted single cell samples were loaded onto a Chromium controller (10x Genomics) for generation of gel bead-in-emulsions (GEM) using 10x Genomics Single Cell 3' Reagent Kit v3. Libraries were constructed using Single Cell 3’ Reagent Kits v3 (10x Genomics)

characteristic: description

text: adult

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: heart

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: strain

text: Sample 1


E-MTAB-9839:Sample 2

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IMPERIAL COLLEGE LONDON

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-9839:Sample 2

characteristic: Submitter Id

text: ArrayExpress

text: fibroblast

text: house mouse

text: adult

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: heart

text: Mus musculus

text: male

text: Sample 2


E-MTAB-9839:Sample 3

characteristic: ENA-CHECKLIST

text: IMPERIAL COLLEGE LONDON

text: public

characteristic: SRA accession

text: E-MTAB-9839:Sample 3

characteristic: age

text: ArrayExpress

text: fibroblast

text: house mouse

characteristic: common name

text: adult

text: wild type genotype

text: Mus musculus

characteristic: organism

text: Mus musculus

text: heart

text: Mus musculus

text: Male

text: Sample 3

characteristic: title


text: CENTER FOR GENOMIC REGULATION (CRG)

text: public

tag: Namespace:CENTER FOR GENOMIC REGULATION (CRG)

text: Saccharomyces cerevisiae BY4741

text: Saccharomyces cerevisiae BY4741


text: CENTER FOR GENOMIC REGULATION (CRG)

text: public

text: Nutrient_and_Temperature_Stress_TotalRNA_Rep1

text: Saccharomyces cerevisiae BY4741

text: Saccharomyces cerevisiae BY4741


text: CENTER FOR GENOMIC REGULATION (CRG)

text: public

text: Nutrient_and_Temperature_Stress_TotalRNA_Rep2

text: Saccharomyces cerevisiae BY4741

text: Saccharomyces cerevisiae BY4741


text: UNIVERSITY OF DUISBURG-ESSEN

text: public

tag: Namespace:UNIVERSITY OF DUISBURG-ESSEN

text: house mouse

text: Mus musculus

text: Mus musculus

text: both

text: Vil1-Cre x FIH +f/+f

text: colon

characteristic: tissue type

text: FIH-floxed mice AOM-DSS-treated


E-MTAB-9843:Sample 4079

text: public

text: E-MTAB-9843:Sample 4079

tag: Namespace:Ahmed Cancer Center for Pancreatic Cancer Research, MD Anderson Cancer Center, University of Texas, Houston, TX 77030, USA

unit: day

text: ArrayExpress

characteristic: broker name

text: house mouse

text: Protocols: YFP+ tumor cells were FACS sorted from fresh harvested PDAC tissues of five A3A_E PKCY and four PKCY mice. DNA was isolated using the AllPrep DNA/RNA Mini Kit. Whole genome sequencing was performed using KAPA Hyper Prep Kit.

characteristic: description

text: adult

characteristic: developmental stage

text: PKCY

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: pancreas

characteristic: organism part

text: neoplasm

characteristic: sampling site

text: Mus musculus

text: female

characteristic: sex

text: Sample 4079


E-MTAB-9843:Sample 4099

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Ahmed Cancer Center for Pancreatic Cancer Research, MD Anderson Cancer Center, University of Texas, Houston, TX 77030, USA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-9843:Sample 4099

text: ArrayExpress

text: house mouse

text: adult

text: PKCY

text: Mus musculus

text: Mus musculus

text: pancreas

text: neoplasm

text: Mus musculus

text: female

characteristic: strain

text: Sample 4099


E-MTAB-9843:Sample 5410

characteristic: ENA-CHECKLIST

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-9843:Sample 5410

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: house mouse

characteristic: common name

text: adult

text: PKCY

text: Mus musculus

characteristic: organism

text: Mus musculus

text: pancreas

text: neoplasm

text: Mus musculus

text: female

text: Sample 5410


E-MTAB-9843:Sample 5766

text: public

text: E-MTAB-9843:Sample 5766

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: description

text: adult

characteristic: developmental stage

text: PKCY

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: pancreas

characteristic: organism part

text: neoplasm

text: Mus musculus

text: female

text: Sample 5766

characteristic: title


E-MTAB-9843:Sample 5789

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-9843:Sample 5789

text: ArrayExpress

text: house mouse

text: adult

text: A3A PKCY

text: Mus musculus

text: Mus musculus

text: pancreas

text: neoplasm

characteristic: sampling site

text: Mus musculus

text: male

characteristic: sex

text: Sample 5789


E-MTAB-9843:Sample 6624

characteristic: ENA-CHECKLIST

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-9843:Sample 6624

text: ArrayExpress

text: house mouse

text: adult

text: A3A PKCY

text: Mus musculus

text: Mus musculus

text: pancreas

text: neoplasm

text: Mus musculus

text: female

characteristic: strain

text: Sample 6624


E-MTAB-9843:Sample 6665

text: public

text: E-MTAB-9843:Sample 6665

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

characteristic: description

text: adult

text: A3A PKCY

text: Mus musculus

characteristic: organism

text: Mus musculus

text: pancreas

text: neoplasm

text: Mus musculus

text: female

text: Sample 6665


E-MTAB-9843:Sample 7515

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-9843:Sample 7515

text: ArrayExpress

text: house mouse

text: adult

characteristic: developmental stage

text: A3A PKCY

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: pancreas

characteristic: organism part

text: neoplasm

text: Mus musculus

text: female

text: Sample 7515

characteristic: title


E-MTAB-9843:Sample 7554

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-9843:Sample 7554

text: ArrayExpress

text: house mouse

text: adult

text: A3A PKCY

text: Mus musculus

text: Mus musculus

text: pancreas

text: neoplasm

characteristic: sampling site

text: Mus musculus

text: female

characteristic: sex

text: Sample 7554


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Faculty of Biology, Medicine and Health, University of Manchester

characteristic: Submitter Id

text: ArrayExpress

text: MCF 10A

characteristic: cell line

text: human

text: Protocols: ATAC-seq samples and libraries were generated as described previously (Buenrostro et al. 2015) 20 ng/ml EGF, 10ug/ml insulin, 500ng/ml hydrocortisone, 100ng/ml chlorotoxin,5% horse serum in DMEM-F12(1:1) miniElute Reaction Cleanup kit and Ampure XP beads Nextera DNA library preparation kit

text: adult

text: fibrocystic disease

characteristic: disease

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: mammary gland

text: Homo sapiens


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Faculty of Biology, Medicine and Health, University of Manchester

text: public

text: ArrayExpress

characteristic: broker name

text: MCF 10A

text: human

characteristic: common name

characteristic: description

text: adult

text: fibrocystic disease

text: wild type genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: mammary gland

text: Homo sapiens


characteristic: ENA-CHECKLIST

characteristic: External Id

text: public

tag: Namespace:International School for Advanced Studies

text: fruit fly

text: Drosophila melanogaster

text: Drosophila melanogaster

text: female

text: head

characteristic: tissue type

text: CTR_1 - RNA-seq from Drosophila heads

characteristic: title


text: International School for Advanced Studies

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: fruit fly

text: Drosophila melanogaster

text: Drosophila melanogaster

text: female

characteristic: sex

text: head

text: CTR_2 - RNA-seq from Drosophila heads


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: fruit fly

text: Drosophila melanogaster

text: Drosophila melanogaster

text: female

text: head

text: CTR_3 - RNA-seq from Drosophila heads


text: public

characteristic: Submitter Id

text: fruit fly

text: Drosophila melanogaster

text: Drosophila melanogaster

text: female

text: head

text: dod_mut_1 - RNA-seq from Drosophila heads


characteristic: ENA-FIRST-PUBLIC

text: public

text: fruit fly

text: Drosophila melanogaster

text: Drosophila melanogaster

text: female

text: head

text: dod_mut_2 - RNA-seq from Drosophila heads


characteristic: ENA-LAST-UPDATE

text: public

text: fruit fly

text: Drosophila melanogaster

text: Drosophila melanogaster

text: female

text: head

text: dod_mut_3 - RNA-seq from Drosophila heads


text: Royal Botanic Garden Edinburgh

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: COPO

characteristic: broker name

text: DAVID BELL | LIZ KUNGU

characteristic: collected by

text: ROYAL BOTANIC GARDEN EDINBURGH

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Peeblesshire | Dawyck Botanic Garden | Cryptogamic Sanctuary

characteristic: geographic location (region and locality)

text: Woodland garden. On base of oak trunk

characteristic: habitat

text: DAVID BELL

characteristic: identified by

text: ROYAL BOTANIC GARDEN EDINBURGH

text: gametophyte

characteristic: lifestage

text: Isothecium alopecuroides

text: WHOLE ORGANISM

characteristic: organism part

text: DTOL

characteristic: project name

text: Isothecium alopecuroides

text: NOT COLLECTED

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: 7dbd6a8f-d76d-425b-bcc8-6816e5ad5651-dtol-specimen

characteristic: tolid


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Royal Botanic Garden Edinburgh

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COPO

characteristic: broker name

text: DAVID BELL | LIZ KUNGU

text: ROYAL BOTANIC GARDEN EDINBURGH

text: United Kingdom

text: Peeblesshire | Dawyck Botanic Garden | Hillside above Dawyck House

text: Woodland garden. On horizontal branches of Acer

text: DAVID BELL

text: ROYAL BOTANIC GARDEN EDINBURGH

text: gametophyte

text: Pulvigera lyellii

characteristic: organism

text: WHOLE ORGANISM

text: DTOL

text: Pulvigera lyellii

text: NOT COLLECTED

characteristic: sex

text: NOT PROVIDED

text: 6620fe0a-f56f-44df-a927-98af9848fd0e-dtol-specimen

characteristic: title


text: Royal Botanic Garden Edinburgh

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: COPO

text: DAVID BELL | LIZ KUNGU

characteristic: collected by

text: ROYAL BOTANIC GARDEN EDINBURGH

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

characteristic: habitat

text: DAVID BELL

characteristic: identified by

text: ROYAL BOTANIC GARDEN EDINBURGH

text: gametophyte

characteristic: lifestage

text: Pulvigera lyellii

text: WHOLE ORGANISM

characteristic: organism part

text: DTOL

characteristic: project name

text: Pulvigera lyellii

text: NOT COLLECTED

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: ceb228b1-ca9e-47e7-9410-5ffb98fd810a-dtol-specimen


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Royal Botanic Garden Edinburgh

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COPO

characteristic: broker name

text: DAVID BELL | LIZ KUNGU

text: ROYAL BOTANIC GARDEN EDINBURGH

text: United Kingdom

text: Woodland garden. On trunk of Acer

text: DAVID BELL

text: ROYAL BOTANIC GARDEN EDINBURGH

text: gametophyte

text: Homalothecium sericeum

characteristic: organism

text: WHOLE ORGANISM

text: DTOL

text: Homalothecium sericeum

text: NOT COLLECTED

characteristic: sex

text: NOT PROVIDED

text: 62faadf0-7942-40ee-96a3-37d5e5f334d3-dtol-specimen

characteristic: tolid


text: Royal Botanic Garden Edinburgh

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: COPO

text: DAVID BELL | LIZ KUNGU

characteristic: collected by

text: ROYAL BOTANIC GARDEN EDINBURGH

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: Woodland garden. On trunk of Acer

characteristic: habitat

text: DAVID BELL

characteristic: identified by

text: ROYAL BOTANIC GARDEN EDINBURGH

text: gametophyte

characteristic: lifestage

text: Homalothecium sericeum

text: WHOLE ORGANISM

characteristic: organism part

text: DTOL

characteristic: project name

text: Homalothecium sericeum

text: NOT COLLECTED

characteristic: specimen id

text: NOT PROVIDED

text: 0a5fed6e-1e82-408c-bcd5-5c4e014c4952-dtol-specimen

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Royal Botanic Garden Edinburgh

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COPO

characteristic: broker name

text: DAVID BELL | LIZ KUNGU

text: ROYAL BOTANIC GARDEN EDINBURGH

text: United Kingdom

text: Woodland garden. On trunk of Acer

text: DAVID BELL

text: ROYAL BOTANIC GARDEN EDINBURGH

text: gametophyte

text: Zygodon viridissimus

characteristic: organism

text: WHOLE ORGANISM

text: DTOL

text: Zygodon viridissimus

text: NOT COLLECTED

characteristic: sex

text: NOT PROVIDED

characteristic: specimen voucher

text: 91badd09-3484-4083-a5b6-bceaa5151a74-dtol-specimen


text: Royal Botanic Garden Edinburgh

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: COPO

text: DAVID BELL | LIZ KUNGU

characteristic: collected by

text: ROYAL BOTANIC GARDEN EDINBURGH

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: Woodland garden. On trunk of Acer

characteristic: habitat

text: DAVID BELL

characteristic: identified by

text: ROYAL BOTANIC GARDEN EDINBURGH

text: gametophyte

characteristic: lifestage

text: Zygodon viridissimus

text: WHOLE ORGANISM

characteristic: organism part

text: DTOL

characteristic: project name

text: Zygodon viridissimus

text: NOT COLLECTED

characteristic: specimen id

text: NOT PROVIDED

text: 6bc98c78-e6fb-4653-b573-4dcbab44c420-dtol-specimen

characteristic: tolid


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Royal Botanic Garden Edinburgh

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COPO

characteristic: broker name

text: DAVID BELL | LIZ KUNGU

text: ROYAL BOTANIC GARDEN EDINBURGH

text: United Kingdom

text: Peeblesshire | Dawyck Botanic Garden | Lower Scrape Glen | footbridge by Dynamo House

text: Woodland garden. On streamside rock

text: DAVID BELL

text: ROYAL BOTANIC GARDEN EDINBURGH

text: gametophyte

text: Thamnobryum alopecurum

characteristic: organism

text: WHOLE ORGANISM

text: DTOL

text: Thamnobryum alopecurum

text: NOT COLLECTED

characteristic: sex

text: NOT PROVIDED

text: f4f1758f-4d5c-48d0-8fca-83d2874bfa48-dtol-specimen

characteristic: title