text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Obesity Liver samples, sample 117


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University Medical Center Groningen

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:University Medical Center Groningen

characteristic: Submitter Id

text: human

characteristic: common name

text: RNAseq experiment of 60 human liver samples with different degrees of NAFLD, part of the MORE (obesity) cohort

characteristic: description

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Obesity Liver samples, sample 97

characteristic: title


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Obesity Liver samples, sample 112


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Obesity Liver samples, sample 76


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Obesity Liver samples, sample 73


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Obesity Liver samples, sample 126


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Obesity Liver samples, sample 54


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Obesity Liver samples, sample 88


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Obesity Liver samples, sample 96


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Obesity Liver samples, sample 106


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Obesity Liver samples, sample 118


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Obesity Liver samples, sample 52


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Obesity Liver samples, sample 68


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Obesity Liver samples, sample 79


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Obesity Liver samples, sample 116


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Obesity Liver samples, sample 120


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Obesity Liver samples, sample 49


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Obesity Liver samples, sample 93


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Obesity Liver samples, sample 95


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Obesity Liver samples, sample 119


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Obesity Liver samples, sample 128


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Obesity Liver samples, sample 44


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Obesity Liver samples, sample 77


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Obesity Liver samples, sample 103


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Obesity Liver samples, sample 110


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Obesity Liver samples, sample 111


text: University Medical Center Groningen

text: public

text: human

text: RNAseq data of HepG2 cells in response to FFA and TNFa, using BSA as control, sereval time points, with 3 biologica replicates per condition

text: Homo sapiens

text: Homo sapiens

text: HepG2 cell treated with BSA, replicate 1, T0


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: HepG2 cell treated with BSA, replicate 2, T0


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: HepG2 cell treated with BSA, replicate 3, T0


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: HepG2 cell treated with free fatty acid, replicate 1, T0


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: HepG2 cell treated with free fatty acid, replicate 2, T0


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: HepG2 cell treated with free fatty acid, replicate 3, T0


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: HepG2 cell treated with BSA, replicate 1, T30 min


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: HepG2 cell treated with BSA, replicate 2, T30 min


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: HepG2 cell treated with BSA, replicate 3, T30 min


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: HepG2 cell treated with FFA, replicate 1, T30min


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: HepG2 cell treated with FFA, replicate 2, T30min


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: HepG2 cell treated with FFA, replicate 3, T30min


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: HepG2 cell treated with TNFa, replicate 1, T30min


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: HepG2 cell treated with TNFa, replicate 2, T30min


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: HepG2 cell treated with TNFa, replicate 3, T30min


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: HepG2 cell treated with BSA, replicate 1, T3h


text: University Medical Center Groningen

text: public

text: human

text: RNAseq data of HepG2 cells in response to FFA and TNFa, using BSA as control, sereval time points, with 3 biologica replicates per condition

text: Homo sapiens

text: Homo sapiens

text: HepG2 cell treated with BSA, replicate 2, T3h


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: HepG2 cell treated with BSA, replicate 3, T3h


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: HepG2 cell treated with TNFa, replicate 1, T3h


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: HepG2 cell treated with TNFa, replicate 2, T3h


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: HepG2 cell treated with TNFa, replicate 3, T3h


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: HepG2 cell treated with BSA, replicate 1, T5h


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: HepG2 cell treated with BSA, replicate 2, T5h


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: HepG2 cell treated with BSA, replicate 3, T5h


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: HepG2 cell treated with FFA, replicate 1, T5h


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: HepG2 cell treated with FFA, replicate 2, T5h


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: HepG2 cell treated with FFA, replicate 3, T5h


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: HepG2 cell treated with TNFa, replicate 1, T5h


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: HepG2 cell treated with TNFa, replicate 2, T5h


text: University Medical Center Groningen

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: HepG2 cell treated with TNFa, replicate 3, T5h


text: MPI BREMEN

text: public

tag: Namespace:MPI BREMEN

characteristic: collection date

text: Posidonia oceanica root pieces

text: coastal sea water

characteristic: environment (biome)

text: sea grass bed

characteristic: environment (feature)

text: root

characteristic: environment (material)

text: Mediterranean Sea

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Fetovaia, Elba, Italy

characteristic: geographic location (region and locality)

text: Posidonia oceanica

characteristic: host common name

characteristic: host taxid

text: metagenome

characteristic: investigation type

text: root metagenome

text: Bakt_805R and Bakt_341F (barcoded), Herlemann et al., 2011

characteristic: pcr primers

text: plant-associated

characteristic: plant-associated environmental package

text: Nitrogen fixing bacterial symbiont in the mediterranean seagrass Posidonia oceanica

characteristic: project name

text: root metagenome

text: Illumina

characteristic: sequencing method

text: 16S rRNA gene, transcriptome

characteristic: target gene

text: V3-V4 16S rRNA gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPI BREMEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Posidonia oceanica root pieces

characteristic: description

text: coastal sea water

text: sea grass bed

text: root

text: Mediterranean Sea

text: Fetovaia, Elba, Italy

text: Posidonia oceanica

text: metagenome

text: root metagenome

characteristic: organism

text: plant-associated

text: root metagenome

text: Illumina

text: 16S rRNA gene

text: V3-V4 16S rRNA gene

characteristic: title


text: MPI BREMEN

text: public

text: Posidonia oceanica root pieces

text: coastal sea water

characteristic: environment (biome)

text: sea grass bed

characteristic: environment (feature)

text: root

characteristic: environment (material)

text: Mediterranean Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Fetovaia, Elba, Italy

characteristic: geographic location (region and locality)

text: Posidonia oceanica

characteristic: host common name

characteristic: host taxid

text: metagenome

characteristic: investigation type

text: root metagenome

characteristic: pcr primers

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

text: root metagenome

text: Illumina, PacBio

characteristic: sequencing method

text: 16S rRNA gene, metagenome

text: V3-V4 16S rRNA gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPI BREMEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Posidonia oceanica root pieces

characteristic: description

text: coastal sea water

text: sea grass bed

text: root

text: Mediterranean Sea

text: Pianosa, Italy

text: Posidonia oceanica

text: metagenome

text: root metagenome

text: plant-associated

text: root metagenome

text: Illumina

text: 16S rRNA gene

characteristic: target gene

text: V3-V4 16S rRNA gene

characteristic: target subfragment


text: UCIBIO/REQUIMTE

text: public

text: Phaffia rhodozyma

characteristic: organism

text: Phaffia rhodozyma

text: Phaffia aurantiaca

characteristic: title


text: University of Westminster

text: public

tag: Namespace:University of Westminster

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: host health state

text: not known

characteristic: host scientific name

characteristic: isolate

text: not known

characteristic: isolation source

text: Salmonella enterica subsp. enterica serovar Typhimurium

text: Typhimurium

characteristic: serovar

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INSTITUT PASTEUR

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:INSTITUT PASTEUR

text: National Reference Centre Listeria, Institut Pasteur, Paris, France

characteristic: collected by

text: Enoki mushrooms sample 2017-2653

text: France

text: Listeria monocytogenes CLIP 2017/01790

text: Food

text: Listeria monocytogenes

text: Listeria monocytogenes

text: CLIP 2017/01790


text: INSTITUT PASTEUR

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Enoki mushrooms sample 2017-2653

characteristic: description

text: France

text: CLIP 2017/01791

text: Food

text: Listeria monocytogenes

characteristic: organism

text: Listeria monocytogenes

text: CLIP 2017/01791


text: INSTITUT PASTEUR

text: public

text: Enoki mushrooms sample 2017-2653

text: France

characteristic: geographic location (country and/or sea)

text: CLIP 2017/01792

characteristic: isolate

text: Food

characteristic: isolation source

text: Listeria monocytogenes

text: Listeria monocytogenes

text: CLIP 2017/01792

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: INSTITUT PASTEUR

text: public

text: Enoki mushrooms sample 2017-2653

text: France

text: CLIP 2017/01793

text: Food

text: Listeria monocytogenes

text: Listeria monocytogenes

text: CLIP 2017/01793


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INSTITUT PASTEUR

text: public

text: Enoki mushrooms sample 2017-2653

text: France

text: CLIP 2017/01794

text: Food

text: Listeria monocytogenes

text: Listeria monocytogenes

text: CLIP 2017/01794


characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:WAGENINGEN UNIVERSITY, LABORATORY OF MICROBIOLOGY

characteristic: common name

text: Artificial

characteristic: environment (biome)

text: In-vitro

characteristic: environment (feature)

text: cells

characteristic: environment (material)

text: Netherlands

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: miscellaneous natural or artificial environment

characteristic: miscellaneous environmental package

text: bacterium

text: anaerobic

characteristic: oxygenation status of sample

text: MDb-MM

characteristic: project name

text: obligate aerobe

characteristic: relationship to oxygen

text: bacterium

text: Illumina NovaSeq

characteristic: sequencing method

text: Rationally designed and assembled a Mucus Diet based Minimal Microbiome (MDb-MM)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: WAGENINGEN UNIVERSITY, LABORATORY OF MICROBIOLOGY

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Artificial

text: In-vitro

text: cells

text: Netherlands

characteristic: geographic location (country and/or sea)

text: human-gut

text: metagenome

text: bacterium

characteristic: organism

text: anaerobic

text: MDb-MM

text: obligate aerobe

text: bacterium

text: Illumina NovaSeq

characteristic: title


characteristic: External Id

text: Louvain Drug Research Institute

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:Louvain Drug Research Institute

text: house mouse

characteristic: common name

text: gut microbiome

characteristic: environment (biome)

text: caecum

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

characteristic: investigation type

text: Mus musculus

text: Gut Reward

text: Mus musculus

text: Illumina

text: Gut microbes participate in food preference alterations during obesity


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: NVRL

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

text: Europe / Ireland / Laois

characteristic: geographic location (region and locality)

unit: year

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status

text: hCoV-19/Ireland/LS-NVRL-S21IRL58183/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Limerick

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/LK-NVRL-S21IRL58221/2021

characteristic: title


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Clare

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: sample capture status

text: hCoV-19/Ireland/CE-NVRL-S21IRL58777/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: virus identifier


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Laois

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/LS-NVRL-S21IRL57756/2021

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Laois

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/LS-NVRL-S21IRL56566/2021


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Westmeath

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/WH-NVRL-S21IRL56302/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Offaly

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/OY-NVRL-S21IRL57074/2021

characteristic: title


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Westmeath

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: sample capture status

text: hCoV-19/Ireland/WH-NVRL-S21IRL56871/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

text: human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: virus identifier


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Kerry

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/KY-NVRL-S21IRL52376/2021


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/D-NVRL-S21IRL00104293/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Donegal

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/DL-NVRL-S21IRL00104091/2021

characteristic: title


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Limerick

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: sample capture status

text: hCoV-19/Ireland/LK-NVRL-S21IRL58228/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Offaly

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/OY-NVRL-S21IRL57081/2021

characteristic: virus identifier


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Laois

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/LS-NVRL-S21IRL53367/2021

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Laois

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/LS-NVRL-S21IRL53365/2021


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Laois

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

text: hCoV-19/Ireland/LS-NVRL-S21IRL56398/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Westmeath

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/WH-NVRL-S21IRL56880/2021

characteristic: title


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Limerick

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: sample capture status

text: hCoV-19/Ireland/LK-NVRL-S21IRL51718/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Limerick

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/LK-NVRL-S21IRL58685/2021

characteristic: virus identifier


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Westmeath

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/WH-NVRL-S21IRL57065/2021

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Offaly

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/OY-NVRL-S21IRL57076/2021


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Kerry

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/KY-NVRL-S21IRL56249/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: title


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Donegal

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: sample capture status

text: hCoV-19/Ireland/DL-NVRL-S21IRL57968/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Waterford

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/WD-NVRL-S21IRL52965/2021

characteristic: virus identifier


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Laois

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/LS-NVRL-S21IRL56568/2021

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Donegal

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/DL-NVRL-S21IRL00104060/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Westmeath

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/WH-NVRL-S21IRL56877/2021

characteristic: title


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Donegal

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: sample capture status

text: hCoV-19/Ireland/DL-NVRL-S21IRL00104004/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S21IRL00104163/2021

characteristic: virus identifier


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Donegal

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: Severe acute respiratory syndrome coronavirus 2

text: hCoV-19/Ireland/DL-NVRL-S21IRL00104065/2021

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Offaly

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: active surveillance in response to outbreak

characteristic: sample capture status

text: hCoV-19/Ireland/OY-NVRL-S21IRL00105025/2021


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Wexford

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/WX-NVRL-S21IRL00104843/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Donegal

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/DL-NVRL-S21IRL00104156/2021

characteristic: title


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Wexford

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: sample capture status

text: hCoV-19/Ireland/WX-NVRL-S21IRL00103877/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Westmeath

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/WH-NVRL-S21IRL57447/2021

characteristic: virus identifier


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Laois

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/LS-NVRL-S21IRL58073/2021

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Limerick

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/LK-NVRL-S21IRL59211/2021


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Westmeath

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/WH-NVRL-S21IRL57007/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S21IRL00104736/2021

characteristic: title


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Wexford

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: sample capture status

text: hCoV-19/Ireland/WX-NVRL-S21IRL00103887/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Donegal

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/DL-NVRL-S21IRL00104139/2021

characteristic: virus identifier


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Donegal

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/DL-NVRL-S21IRL00104154/2021

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Donegal

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/DL-NVRL-S21IRL00104116/2021


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Donegal

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: Severe acute respiratory syndrome coronavirus 2

text: hCoV-19/Ireland/DL-NVRL-S21IRL00104217/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Kerry

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: active surveillance in response to outbreak

text: hCoV-19/Ireland/KY-NVRL-S21IRL50292/2021

characteristic: title


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Laois

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: sample capture status

text: hCoV-19/Ireland/LS-NVRL-S21IRL48879/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Westmeath

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/WH-NVRL-S21IRL49910/2021

characteristic: virus identifier


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Westmeath

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/WH-NVRL-S21IRL49675/2021

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Westmeath

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/WH-NVRL-S21IRL49251/2021


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Offaly

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/OY-NVRL-S21IRL49490/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Louth

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/LH-NVRL-S21IRL11808/2021

characteristic: title


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Kerry

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/KY-NVRL-S21IRL50305/2021

characteristic: virus identifier


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Offaly

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/OY-NVRL-S21IRL48554/2021

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Offaly

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/OY-NVRL-S21IRL48530/2021


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Limerick

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/LK-NVRL-S21IRL48722/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Limerick

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/LK-NVRL-S21IRL50939/2021

characteristic: title


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

text: Europe / Ireland / Kerry

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: sample capture status

text: hCoV-19/Ireland/KY-NVRL-S21IRL50886/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Limerick

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: hCoV-19/Ireland/LK-NVRL-S21IRL49263/2021

characteristic: virus identifier


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Limerick

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: active surveillance in response to outbreak

text: hCoV-19/Ireland/LK-NVRL-S21IRL49390/2021

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Limerick

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/LK-NVRL-S21IRL50121/2021


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Limerick

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/LK-NVRL-S21IRL49386/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Limerick

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/LK-NVRL-S21IRL51006/2021

characteristic: title


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Limerick

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: sample capture status

text: hCoV-19/Ireland/LK-NVRL-S21IRL50957/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Limerick

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/LK-NVRL-S21IRL49399/2021

characteristic: virus identifier


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Limerick

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/LK-NVRL-S21IRL49389/2021

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Limerick

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/LK-NVRL-S21IRL49266/2021


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Offaly

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/OY-NVRL-S21IRL48535/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Laois

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/LS-NVRL-S21IRL48818/2021

characteristic: title


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Westmeath

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: sample capture status

text: hCoV-19/Ireland/WH-NVRL-S21IRL50082/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Limerick

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/LK-NVRL-S21IRL49366/2021

characteristic: virus identifier


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Limerick

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/LK-NVRL-S21IRL49115/2021


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Westmeath

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: Severe acute respiratory syndrome coronavirus 2

text: hCoV-19/Ireland/WH-NVRL-S21IRL50070/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Westmeath

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: active surveillance in response to outbreak

text: hCoV-19/Ireland/WH-NVRL-S21IRL49680/2021

characteristic: title


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Limerick

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: sample capture status

text: hCoV-19/Ireland/LK-NVRL-S21IRL50958/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Limerick

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/LK-NVRL-S21IRL49277/2021

characteristic: virus identifier


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Limerick

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/LK-NVRL-S21IRL49280/2021

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Laois

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/LS-NVRL-S21IRL50807/2021


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Kerry

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/KY-NVRL-S21IRL50307/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Clare

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/CE-NVRL-S21IRL50731/2021

characteristic: title


text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Ireland

text: Europe / Ireland / Westmeath

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: sample capture status

text: hCoV-19/Ireland/WH-NVRL-S21IRL50002/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Clare

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/CE-NVRL-S21IRL50520/2021

characteristic: virus identifier