text: Neisseria gonorrhoeae

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tag: attribute

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characteristic: Submitter Id

text: Neisseria gonorrhoeae

characteristic: common name

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type: AMR curated data - CABBAGE

value: ceftriaxone

value: mg/L

value: susceptible

value: Neisseria gonorrhoeae

value: ciprofloxacin

value: resistant

value: azithromycin

value: cefixime


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text: Salmonella enterica


text: Salmonella enterica

text: MA.08ba 2387

text: SC

text: public

text: Salmonella enterica

text: Salmonella enterica

text: Salmonella enterica


text: Salmonella enterica

text: MA.159 KAK-20

text: SC

text: public

text: Salmonella enterica

text: Salmonella enterica

text: Salmonella enterica


text: Salmonella enterica

text: MA.156 KAK-3

text: SC

text: public

text: Salmonella enterica

text: Salmonella enterica

text: Salmonella enterica


text: Salmonella enterica

text: MA.128 KPES-3

text: SC

text: public

text: Salmonella enterica

text: Salmonella enterica

text: Salmonella enterica


text: Salmonella enterica

text: MA.CDC B1400 = SARA29 & SARB56

text: SC

text: public

text: Salmonella enterica

text: Salmonella enterica

text: Salmonella enterica


text: Mus musculus

characteristic: ArrayExpress-Species

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus


text: ETZ Tilburg

text: public

tag: Namespace:ETZ Tilburg

text: reference

characteristic: description

text: Escherichia coli

text: Escherichia coli


text: ETZ Tilburg

text: public

text: mutant

text: Escherichia coli

characteristic: organism

text: Escherichia coli


text: female

characteristic: ArrayExpress-SEX

text: Streptococcus equi

text: SC

text: public

text: Streptococcus equi

text: Female

characteristic: gender

text: Streptococcus equi

text: Streptococcus equi

characteristic: subject id


text: male

text: Streptococcus equi

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

characteristic: INSDC status

text: Streptococcus equi

text: Male

text: Streptococcus equi

text: Streptococcus equi

characteristic: title


text: Streptococcus equi

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: Streptococcus equi

text: Streptococcus equi

text: Streptococcus equi


text: male

characteristic: ArrayExpress-Sex

text: Streptococcus equi

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Streptococcus equi

text: Streptococcus equi

text: DNA

characteristic: sample description

text: Streptococcus equi


text: Copadichromis virginalis

text: SC

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Copadichromis virginalis

characteristic: common name

text: Copadichromis virginalis

text: Copadichromis virginalis


text: Copadichromis chrysonotus

text: SC

text: public

text: Copadichromis chrysonotus

text: Copadichromis chrysonotus

characteristic: organism

text: Copadichromis chrysonotus


text: Plasmodium knowlesi

characteristic: ArrayExpress-Species

text: SC

text: public

text: Plasmodium knowlesi

text: Plasmodium knowlesi

text: Plasmodium knowlesi

text: Pk wild type


text: Plasmodium knowlesi

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: Plasmodium knowlesi

text: Plasmodium knowlesi

text: Plasmodium knowlesi

text: PkARP replacement-1


text: Plasmodium knowlesi

text: SC

text: public

characteristic: INSDC status

text: Plasmodium knowlesi

text: Plasmodium knowlesi

text: Plasmodium knowlesi

text: PkARP replacement-2


text: Plasmodium knowlesi

text: SC

text: public

text: Plasmodium knowlesi

text: Plasmodium knowlesi

text: Plasmodium knowlesi

characteristic: title


text: Plasmodium knowlesi

text: SC

text: public

text: Plasmodium knowlesi

text: Plasmodium knowlesi

text: Plasmodium knowlesi

text: Pk41 replacement-1


text: Plasmodium knowlesi

text: SC

text: public

text: Plasmodium knowlesi

text: Plasmodium knowlesi

text: Plasmodium knowlesi

text: Pk41 replacement-2


text: Plasmodium knowlesi

text: SC

text: public

text: Plasmodium knowlesi

text: Plasmodium knowlesi

text: Plasmodium knowlesi

text: PkGAMA replacement-1


text: Plasmodium knowlesi

text: SC

text: public

text: Plasmodium knowlesi

text: Plasmodium knowlesi

text: Plasmodium knowlesi

text: PkGAMA replacement-2


text: Plasmodium knowlesi

text: SC

text: public

text: Plasmodium knowlesi

text: Plasmodium knowlesi

text: Plasmodium knowlesi

text: Pk12 replacement-1


text: Plasmodium knowlesi

text: SC

text: public

text: Plasmodium knowlesi

text: Plasmodium knowlesi

text: Plasmodium knowlesi

text: Pk12 replacement-2


text: Plasmodium knowlesi

text: SC

text: public

text: Plasmodium knowlesi

text: Plasmodium knowlesi

text: Plasmodium knowlesi

text: p230 dicre-1


text: Plasmodium knowlesi

text: SC

text: public

text: Plasmodium knowlesi

text: Plasmodium knowlesi

text: Plasmodium knowlesi

text: p230 dicre-2


text: JIC

text: public

text: weeping love grass

text: This is a pathogen - host interaction of a M. oryzae strain Guy11 on a Eragrostis curvula 48hpi

characteristic: description

text: Eragrostis curvula

text: Eragrostis curvula


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF WARWICK

text: public

tag: Namespace:UNIVERSITY OF WARWICK

text: Viral Metagenomic sample

text: Yes

characteristic: environmental sample

text: aquatic viral metagenome

text: aquatic viral metagenome

text: Viral Metagenomic sample


characteristic: ENA-LAST-UPDATE

text: UMR 1137 IAME

text: public

tag: Namespace:UMR 1137 IAME

characteristic: collection date

text: France

characteristic: geographic location (country and/or sea)

text: healthy

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

text: Fecal samples

characteristic: isolate

text: Assistance Publique - Hopitaux de Paris

characteristic: isolation source

text: Escherichia coli

text: Escherichia coli

text: O9:H4 / 615 (ST Warwick)

characteristic: serovar


characteristic: External Id

text: UMR 1137 IAME

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: France

text: healthy

text: homo sapiens

text: Fecal samples

text: Assistance Publique - Hopitaux de Paris

text: Escherichia coli

text: Escherichia coli

text: O89:H10 / 167 (ST Warwick)


characteristic: ENA-FIRST-PUBLIC

text: public

characteristic: INSDC status

tag: Namespace:Centre for Translational Microbiome Research (CTMR)

text: 16S reads from a sigmoid biopsy sample from PopCol subject 5044

characteristic: description

text: Human gut

characteristic: environment (biome)

text: Sigmoid mucosa

characteristic: environment (feature)

text: Pinch biopsy

characteristic: environment (material)

text: diverticula

characteristic: gastrointestinal tract disorder

text: Sweden

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Stockholm

characteristic: geographic location (region and locality)

unit: year

characteristic: host age

characteristic: host body mass index

text: Mucosal tissue

characteristic: host body product

text: male

characteristic: host sex

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: mimarks-survey

characteristic: investigation type

text: PCR amplification

characteristic: library screening strategy

text: gut metagenome

characteristic: organism

text: PopCol

characteristic: project name

characteristic: sample storage duration

text: Swedish Center for Communicable Disease Control

characteristic: sample storage location

unit: °C

characteristic: sample storage temperature

text: gut metagenome

text: Illumina

characteristic: sequencing method

characteristic: sequencing run

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Centre for Translational Microbiome Research (CTMR)

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: 16S reads from a sigmoid biopsy sample from PopCol subject 5051

characteristic: description

text: Human gut

characteristic: environment (biome)

text: Sigmoid mucosa

characteristic: environment (feature)

text: Pinch biopsy

characteristic: environment (material)

text: diverticula

characteristic: gastrointestinal tract disorder

text: Sweden

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Stockholm

characteristic: geographic location (region and locality)

text: Mucosal tissue

text: severe anxiety

characteristic: host disease status

text: female

text: human-gut

text: mimarks-survey

text: PCR amplification

text: gut metagenome

text: PopCol

text: gut metagenome

text: Illumina


text: Asterias rubens

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: European starfish

characteristic: common name

text: Asterias rubens

characteristic: organism

text: Asterias rubens

characteristic: subject id

characteristic: title


text: Staphylococcus ureilyticus

characteristic: ArrayExpress-Species

text: 8854/03 sm macaque

characteristic: ArrayExpress-StrainOrLine

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Staphylococcus ureilyticus

text: Staphylococcus ureilyticus

text: Claire Clin Path

characteristic: sample description

text: Staphylococcus ureilyticus

text: 8854/03 sm macaque

characteristic: strain


text: Staphylococcus ureilyticus

text: 2140/02 lg macaque

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: Staphylococcus ureilyticus

text: Staphylococcus ureilyticus

text: Claire Clin Path

text: Staphylococcus ureilyticus

text: 2140/02 lg macaque


text: Staphylococcus hominis subsp. hominis

text: 2140/02 sm macaque

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: Staphylococcus hominis subsp. hominis

text: Staphylococcus hominis subsp. hominis

text: Claire Clin Path

text: Staphylococcus hominis subsp. hominis

text: 2140/02 sm macaque


text: IZSLER

characteristic: INSDC center name

text: public

characteristic: collection date

text: Salmonella Derby

characteristic: common name

text: WGS-based analysis

characteristic: description

text: Italy

characteristic: geographic location (country and/or sea)

text: Emilia Romagna

characteristic: geographic location (region and locality)

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

characteristic: isolate

text: human

characteristic: isolation source

text: Salmonella enterica subsp. enterica serovar Derby

text: Derby

characteristic: serovar

text: A single non-synonymous SNP in HilD is responsible for swine host adaptation of a Salmonella Derby cluster in Italy


text: IZSLER

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Salmonella Derby

text: WGS-based analysis

text: Italy

text: Emilia Romagna

text: not provided

text: Sus scrofa

text: pig

characteristic: organism

text: Derby

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IZSLER

characteristic: INSDC center name

text: public

characteristic: collection date

text: Salmonella Derby

text: WGS-based analysis

text: Italy

text: Lombardia

text: not provided

text: Sus scrofa

text: pig

text: Derby


text: IZSLER

text: public

text: Salmonella Derby

characteristic: common name

text: WGS-based analysis

characteristic: description

text: Italy

characteristic: geographic location (country and/or sea)

text: Emilia Romagna

characteristic: geographic location (region and locality)

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: animal

text: Derby


text: IZSLER

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Salmonella Derby

text: WGS-based analysis

text: Italy

text: Emilia Romagna

text: not provided

characteristic: isolate

text: environment

characteristic: isolation source

text: Derby

characteristic: serovar


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Institute of Vertebrate Biology, CAS

text: public

characteristic: SRA accession

tag: Namespace:Institute of Vertebrate Biology, CAS

characteristic: Submitter Id

text: Jacek M Szymura

characteristic: collected by

text: fire-bellied toad

text: grandparent of F2 cross

text: adult

characteristic: dev stage

text: Poland

text: woj. kieleckie, Wodzislaw Malopolski

characteristic: lat lon

text: Bombina bombina

characteristic: organism

text: Bombina bombina

text: female

characteristic: sex

text: muscle

characteristic: tissue type

text: B. bombina female

characteristic: title


text: Salmonella enterica

characteristic: ArrayExpress-SPECIES

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Salmonella enterica

characteristic: common name

text: Salmonella enterica

text: Salmonella enterica

characteristic: subject id


text: Salmonella enterica

text: MA.AU147 GOU-14

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Salmonella enterica

text: Salmonella enterica

text: Salmonella enterica


text: Salmonella enterica

text: MA.04ba 6768-1

text: SC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Salmonella enterica

text: Salmonella enterica

text: Salmonella enterica


text: Salmonella enterica

text: MA.102 VAN-22

text: SC

text: public

text: Salmonella enterica

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica


text: Salmonella enterica

text: MA.80 IGER-3

text: SC

text: public

text: Salmonella enterica

text: Salmonella enterica

text: Salmonella enterica


text: Plasmodium vivax

characteristic: ArrayExpress-Species

characteristic: ArrayExpress-StrainOrLine

text: SC

text: public

text: malaria parasite P. vivax

text: Plasmodium vivax

text: ex vivo Schizonts

characteristic: sample description

text: Plasmodium vivax

characteristic: strain


characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF EXETER

text: public

tag: Namespace:UNIVERSITY OF EXETER

text: Pseudomonas aeruginosa

characteristic: description

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa

characteristic: title


characteristic: External Id

text: UNIVERSITY OF EXETER

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Pseudomonas aeruginosa

text: wt_phage _e_120

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa

text: wt_phage _e_120


characteristic: ENA-CHECKLIST

text: EESC/USP

text: public

characteristic: collection date

text: reactor

characteristic: environment (biome)

text: reactor

characteristic: environment (feature)

text: biomass

characteristic: environment (material)

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: investigation type

text: environmental samples

text: treatment of vinasse

characteristic: project name

text: environmental samples

text: Illumina

characteristic: sequencing method

text: wastewater/sludge

characteristic: wastewater/sludge environmental package


text: Salmonella enterica

characteristic: ArrayExpress-SPECIES

text: MA.84 KAK-3

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Salmonella enterica

characteristic: common name

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

characteristic: subject id


text: Salmonella enterica

text: MA.135 KAW-10

characteristic: ENA-CHECKLIST

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Salmonella enterica

text: Salmonella enterica

text: Salmonella enterica

characteristic: title


text: Salmonella enterica

text: MA.132 KAW-3

text: SC

text: public

text: Salmonella enterica

text: Salmonella enterica

text: Salmonella enterica


text: Swedish museum of Natural HIstory

text: public

tag: Namespace:Swedish museum of Natural HIstory

text: kakapo

text: New Zealand

characteristic: geographic location (country and/or sea)

text: Strigops habroptila

text: Strigops habroptila

text: Kakapo WGS


text: IZSLER

text: public

characteristic: collection date

text: Salmonella Derby

text: WGS-based analysis

characteristic: description

text: Italy

text: Emilia Romagna

characteristic: geographic location (region and locality)

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

characteristic: isolate

text: human

characteristic: isolation source

text: Derby

characteristic: serovar


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: NUS

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Gut

characteristic: environment (biome)

text: large intestine of adult

characteristic: environment (feature)

text: Fecal samples of adult

characteristic: environment (material)

text: Singapore

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-associated

characteristic: human associated environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

text: Spices intervention

characteristic: project name

text: human gut metagenome

text: pyosequencing

characteristic: sequencing method

text: Spices intervention


pgRNAs-UP

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: pgRNAs-UP

tag: Namespace:UNIVERSITY OF NATURAL RESOURCES AND LIFE SCIENCES,

text: E.coli

characteristic: common name

text: plasmid fragment containing pgRNAs upstream from EpoFc

characteristic: description

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: pgRNAs-UP

characteristic: title


pgRNAs-DOWN

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF NATURAL RESOURCES AND LIFE SCIENCES,

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pgRNAs-DOWN

characteristic: Submitter Id

text: E.coli

text: plasmid fragment containing pgRNAs downstream from EpoFc

text: Escherichia coli

text: Escherichia coli

text: pgRNAs-DOWN


text: Tail

characteristic: ArrayExpress-PHENOTYPE

text: female

characteristic: ArrayExpress-SEX

text: Mus musculus

characteristic: ArrayExpress-SPECIES

text: SC

text: public

text: house mouse

text: Female

characteristic: gender

text: Mus musculus

text: Tail

characteristic: phenotype

text: Mus musculus

characteristic: subject id


text: Intestinal-tumour-organoid-line

text: female

text: Mus musculus

characteristic: ENA-CHECKLIST

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: house mouse

text: Female

text: Mus musculus

text: Intestinal-tumour-organoid-line

text: Mus musculus


text: Tail

text: male

text: Mus musculus

text: SC

text: public

text: house mouse

characteristic: common name

text: Male

text: Mus musculus

characteristic: organism

text: Tail

text: Mus musculus

characteristic: title


text: Intestinal-tumour-organoid-line

text: male

text: Mus musculus

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

characteristic: INSDC last update

text: public

text: house mouse

text: Male

text: Mus musculus

text: Intestinal-tumour-organoid-line

text: Mus musculus


text: Intestinal-tumour-RNA-later-preserved-tissue

text: female

text: Mus musculus

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: house mouse

text: Female

text: Mus musculus

text: Mus musculus


characteristic: ArrayExpress-PHENOTYPE

text: male

characteristic: ArrayExpress-SEX

text: Mus musculus

characteristic: ArrayExpress-SPECIES

text: SC

text: public

text: house mouse

text: Male

text: Mus musculus

text: Mus musculus


text: Salmonella enterica

text: SC

text: public

text: Salmonella enterica

text: Salmonella enterica

text: Salmonella enterica

characteristic: subject id


text: Staphylococcus ureilyticus

characteristic: ArrayExpress-Species

text: 3024/02 cow

characteristic: ArrayExpress-StrainOrLine

characteristic: ENA-CHECKLIST

text: SC

text: public

text: Staphylococcus ureilyticus

text: Staphylococcus ureilyticus

text: Claire Clin Path

characteristic: sample description

text: Staphylococcus ureilyticus

text: 3024/02 cow

characteristic: strain


text: Staphylococcus ureilyticus

text: 3024/01 white cow

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Staphylococcus ureilyticus

characteristic: common name

text: Staphylococcus ureilyticus

characteristic: organism

text: Claire Clin Path

text: Staphylococcus ureilyticus

text: 3024/01 white cow


text: human lung metagenome

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: human lung metagenome

text: human lung metagenome

text: human lung metagenome

characteristic: title


text: Maria Curie-Sklodowska University

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: sediment metagenome

text: sediment metagenome

text: layer 55-1


text: Maria Curie-Sklodowska University

text: public

text: sediment metagenome

text: sediment metagenome

text: layer 55-2


text: Maria Curie-Sklodowska University

text: public

text: sediment metagenome

text: sediment metagenome

text: layer 65-1


text: Maria Curie-Sklodowska University

text: public

text: sediment metagenome

text: sediment metagenome

text: layer 65-2


text: Maria Curie-Sklodowska University

text: public

text: sediment metagenome

text: sediment metagenome

text: layer 76-1


text: Maria Curie-Sklodowska University

text: public

text: sediment metagenome

text: sediment metagenome

text: layer 76-2


text: EAWAG

text: public

characteristic: collection date

text: Temperate

characteristic: environment (biome)

text: Lake

characteristic: environment (feature)

text: Sediment

characteristic: environment (material)

text: Switzerland

characteristic: geographic location (country and/or sea)

unit: m

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: investigation type

text: bacterium

characteristic: project name

text: bacterium

text: sediment

characteristic: sediment environmental package

text: Illumina MiSeq

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: FISABIO- Public Health Research

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:FISABIO- Public Health Research

text: human gut metagenome

characteristic: common name

characteristic: description

text: terrestrial biome

text: human-associated habitat

text: human-associated habitat

text: Spain

text: human-associated

characteristic: human associated environmental package

text: metagenome

text: human gut metagenome

characteristic: organism

text: human gut metagenome

text: Illumina

text: Amplicon (V3-V4) of 16S rRNA gene


text: Streptococcus pneumoniae

characteristic: ArrayExpress-SPECIES

text: SC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

characteristic: subject id

characteristic: title


text: Staphylococcus aureus

characteristic: ENA-CHECKLIST

text: SC

text: public

text: Staphylococcus aureus

text: Staphylococcus aureus

text: Staphylococcus aureus


characteristic: ENA-FIRST-PUBLIC

text: public

tag: Namespace:FAU Erlangen-Nurnberg Institute of Genetics

text: ArrayExpress

characteristic: broker name

text: MLL-ENL

characteristic: cell line

text: myeloid leukocyte

characteristic: cell type

text: house mouse

text: Protocols: Cells were grown in MEM supplemented with 10% FCS, pen/strep and 1x MEM essential amino acids (all ThermoFisher, Dreieich Germany) for starvation (minimal) media. For fully supplemented media serine and glycine was added to 400µM each. Cells were labeled for 1h by addition of 4-thiouridine at 100µM and harvested (approx. 10x10e6 cells)by centrifugation for lysis and nucleic extraction. cells grown in serine/glycine supplemented medium Nascent RNA isolation was performed exactly as described in Garcia-Cuellar et al. CellReports S2211-1247(16)30259-5. In short RNA was isolated with Qiagen RNAeasy column purification followed by biotinylation with Biotin-HPDP. Labeled RNA was isolated by Streptavidin coupled beads (µBeads) from Miltenyi (µMACS) exactly as recommended by the supplier. Non-stranded RNA libraries were prepared by New England Biolabs NEB/NEXT SingleCell /Low Input Library Prep Kit exactly as recommended.

text: adult

characteristic: developmental stage

text: Acute Leukemia

characteristic: disease

text: wild type genotype

characteristic: genotype

text: full medium

characteristic: growth condition

text: Mus musculus

text: Mus musculus

text: bone marrow

characteristic: organism part

text: Mus musculus

text: MLLENL


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: FAU Erlangen-Nurnberg Institute of Genetics

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: MLL-ENL_starv resistant

text: myeloid leukocyte

text: house mouse

characteristic: common name

text: Protocols: Cells were grown in MEM supplemented with 10% FCS, pen/strep and 1x MEM essential amino acids (all ThermoFisher, Dreieich Germany) for starvation (minimal) media. For fully supplemented media serine and glycine was added to 400µM each. Cells were labeled for 1h by addition of 4-thiouridine at 100µM and harvested (approx. 10x10e6 cells)by centrifugation for lysis and nucleic extraction. cells grown in minimal medium (starvation) Nascent RNA isolation was performed exactly as described in Garcia-Cuellar et al. CellReports S2211-1247(16)30259-5. In short RNA was isolated with Qiagen RNAeasy column purification followed by biotinylation with Biotin-HPDP. Labeled RNA was isolated by Streptavidin coupled beads (µBeads) from Miltenyi (µMACS) exactly as recommended by the supplier. Non-stranded RNA libraries were prepared by New England Biolabs NEB/NEXT SingleCell /Low Input Library Prep Kit exactly as recommended.

characteristic: description

text: adult

text: Acute Leukemia

text: wild type genotype

text: serine/glycine starvation

text: Mus musculus

text: Mus musculus

text: bone marrow

text: Mus musculus


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: MLL-ENL

text: myeloid leukocyte

text: house mouse

text: adult

text: Acute Leukemia

text: wild type genotype

text: serine/glycine starvation

text: Mus musculus

characteristic: organism

text: Mus musculus

text: bone marrow

text: Mus musculus

characteristic: title


text: Anopheles funestus

characteristic: ArrayExpress-SPECIES

text: SC

text: public

text: African malaria mosquito

text: Anopheles funestus

text: Anopheles funestus

characteristic: subject id


text: CBMSO

text: public

text: microglia

characteristic: cell type

text: house mouse

text: Microglia from saline treated CX3CR1+/GFP;Sfrp1-/- brain

text: adult p100

characteristic: dev stage

text: Mus musculus

text: Mus musculus

text: male

characteristic: sex

characteristic: strain

characteristic: sub strain

text: brain cortex

characteristic: tissue type


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CBMSO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: microglia

text: house mouse

text: Microglia from LPS treated CX3CR1+/GFP;Sfrp1-/- brain

text: adult p100

text: Mus musculus

text: Mus musculus

text: male

text: brain cortex


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: CBMSO

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: microglia

text: house mouse

characteristic: common name

text: Microglia from saline treated CX3CR1+/GFP brain

characteristic: description

text: adult p100

text: Mus musculus

text: Mus musculus

text: male

text: brain cortex


text: CBMSO

text: public

text: microglia

characteristic: cell type

text: house mouse

text: Microglia from LPS treated CX3CR1+/GFP brain

text: adult p100

characteristic: dev stage

text: Mus musculus

characteristic: organism

text: Mus musculus

text: male

text: brain cortex

characteristic: title


text: Neisseria gonorrhoeae

characteristic: ArrayExpress-SPECIES

text: SC

text: public

text: Neisseria gonorrhoeae

text: Neisseria gonorrhoeae

text: Neisseria gonorrhoeae

characteristic: subject id


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF JENA

text: public

tag: Namespace:UNIVERSITY OF JENA

characteristic: collection date

text: groundwater metagenome

text: groundwater metagenome

text: Illumina

characteristic: sequencing method

text: Groundwater metagenome, well H52, replicate 1

type: derived-from


text: UNIVERSITY OF JENA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: groundwater metagenome

text: groundwater metagenome

text: Illumina

text: Groundwater metagenome, well H52, replicate 2


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF JENA

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: groundwater metagenome

text: groundwater metagenome

text: Illumina

text: Groundwater metagenome, well H52, replicate 3


text: UNIVERSITY OF JENA

text: public

text: groundwater metagenome

text: groundwater metagenome

text: Illumina

text: Groundwater metagenome, well H51, replicate 1


text: UNIVERSITY OF JENA

text: public

text: groundwater metagenome

text: groundwater metagenome

text: Illumina

text: Groundwater metagenome, well H51, replicate 2


text: UNIVERSITY OF JENA

text: public

text: groundwater metagenome

text: groundwater metagenome

text: Illumina

text: Groundwater metagenome, well H51, replicate 3


text: UNIVERSITY OF JENA

text: public

text: groundwater metagenome

text: groundwater metagenome

text: Illumina

text: Groundwater metagenome, well H43, replicate 1


text: UNIVERSITY OF JENA

text: public

text: groundwater metagenome

text: groundwater metagenome

text: Illumina

text: Groundwater metagenome, well H43, replicate 2


text: UNIVERSITY OF JENA

text: public

text: groundwater metagenome

text: groundwater metagenome

text: Illumina

text: Groundwater metagenome, well H43, replicate 3


text: UNIVERSITY OF JENA

text: public

text: groundwater metagenome

text: groundwater metagenome

text: Illumina

text: Groundwater metagenome, well H41, replicate 1


text: UNIVERSITY OF JENA

text: public

text: groundwater metagenome

text: groundwater metagenome

text: Illumina

text: Groundwater metagenome, well H41, replicate 2


text: UNIVERSITY OF JENA

text: public

text: groundwater metagenome

text: groundwater metagenome

text: Illumina

text: Groundwater metagenome, well H41, replicate 3


text: UNIVERSITY OF JENA

text: public

text: groundwater metagenome

text: groundwater metagenome

text: Illumina

text: Groundwater metagenome, well H32, replicate 1


text: UNIVERSITY OF JENA

text: public

text: groundwater metagenome

text: groundwater metagenome

text: Illumina

text: Groundwater metagenome, well H14, replicate 1


text: UNIVERSITY OF JENA

text: public

text: groundwater metagenome

text: groundwater metagenome

text: Illumina

text: Groundwater metagenome, well H14, replicate 2


text: UNIVERSITY OF JENA

text: public

text: groundwater metagenome

text: groundwater metagenome

text: Illumina

text: Groundwater metagenome, well H14, replicate 3


text: UNIVERSITY OF JENA

text: public

text: groundwater metagenome

text: groundwater metagenome

text: Illumina

text: Groundwater metagenome, well H32 (earlier sampling campaign), replicate 1


text: EI

text: public

text: 5d7fae7f7937a00070ffd2ab:sample:Oreochromis mossambicus Testis

text: COPO

characteristic: broker name

text: Mozambique tilapia

characteristic: common name

text: Oreochromis mossambicus

text: Oreochromis mossambicus

text: Male

characteristic: sex

text: Oreochromis mossambicus M5 Testis

characteristic: source name


text: EI

text: public

text: 5e32e2834268eb00017e9a52:sample:Oreochromis rukwaensis

text: COPO

text: Oreochromis rukwaensis

characteristic: organism

text: Oreochromis rukwaensis

text: Male

text: Oreochromis rukwaensis M11 Testis_new

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EI

text: public

text: 5e32e2134268eb00017e9a48:sample:Oreochromis rukwaensis

text: COPO

text: Oreochromis rukwaensis

text: Oreochromis rukwaensis

text: Male

text: Oreochromis rukwaensis M11 Testis_new