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characteristic: geographic location (latitude)

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text: Human

text: not provided

text: Homo sapiens

text: female

characteristic: host sex

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text: SARS-CoV-2 genome COV004258


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tag: attribute

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text: IBV-CSIC

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: Servicio de Microbiología. Hospital Universitario Donostia. OSI Donostialdea. Área de Enfermedades Infecciosas, Grupo de Infección Respiratoria y Resistencia Antimicrobiana. Instituto de Investigación Sanitaria Biodonostia and SeqCOVID-Spain consortium

characteristic: collection date

text: Gustavo Cilla Eguiluz, Milagrosa Montes Ros, Luis Piñeiro Vázquez, Ane Sorrarain, Jose Maria Marimón and SeqCOVID-Spain consortium

text: WGA sequencing of SARS-CoV-2 samples

text: Spain

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (region and locality)

unit: year

characteristic: host age

text: Human

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text: Homo sapiens

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text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

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characteristic: title

characteristic: virus identifier


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text: SARS-CoV-2 genome COV004260


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text: Human

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text: SARS-CoV-2 genome COV004261


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characteristic: organism

text: SARS-CoV-2 genome COV004262

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characteristic: virus identifier


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text: Human

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text: SARS-CoV-2 genome COV004263


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characteristic: geographic location (country and/or sea)

characteristic: geographic location (region and locality)

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text: Human

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characteristic: organism

text: SARS-CoV-2 genome COV004265

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text: IBV-CSIC

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text: SARS-CoV-2 genome COV004266


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text: IBV-CSIC

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text: WGA sequencing of SARS-CoV-2 samples

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characteristic: geographic location (country and/or sea)

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text: Human

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text: Homo sapiens

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text: SARS-CoV-2 genome COV004267


text: IBV-CSIC

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text: Human

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characteristic: organism

text: SARS-CoV-2 genome COV004268

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characteristic: virus identifier


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characteristic: geographic location (region and locality)

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text: Human

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characteristic: host sex

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text: SARS-CoV-2 genome COV004269


text: IBV-CSIC

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text: SARS-CoV-2 genome COV004270


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text: WGA sequencing of SARS-CoV-2 samples

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characteristic: geographic location (region and locality)

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text: Human

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text: female

characteristic: organism

text: SARS-CoV-2 genome COV004271

characteristic: title

characteristic: virus identifier


text: IBV-CSIC

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text: Servicio de Microbiología, Hospital Miguel Servet, Zaragoza and SeqCOVID-Spain consortium

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text: Antonio Rezusta López, Alexander Tristancho Baró, Ana Milagro, Yolanda Gracia Grataloup, Nieves Martínez Cameo and SeqCOVID-Spain consortium

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text: WGA sequencing of SARS-CoV-2 samples

characteristic: description

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Zaragoza

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text: male

characteristic: host sex

characteristic: host subject id

characteristic: isolate

text: SARS-CoV-2 genome COV005028


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text: WGA sequencing of SARS-CoV-2 samples

text: Spain

characteristic: geographic location (country and/or sea)

text: Zaragoza

characteristic: geographic location (region and locality)

characteristic: host age

text: Human

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text: SARS-CoV-2 genome COV005029


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text: Zaragoza

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text: female

characteristic: organism

text: SARS-CoV-2 genome COV005032

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characteristic: virus identifier


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text: WGA sequencing of SARS-CoV-2 samples

text: Spain

characteristic: geographic location (country and/or sea)

text: Zaragoza

characteristic: geographic location (region and locality)

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text: Human

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text: female

characteristic: host sex

characteristic: host subject id

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text: SARS-CoV-2 genome COV005033


text: IBV-CSIC

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text: Spain

characteristic: geographic location (latitude)

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text: Zaragoza

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text: female

text: SARS-CoV-2 genome COV005036


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text: IBV-CSIC

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text: WGA sequencing of SARS-CoV-2 samples

text: Spain

characteristic: geographic location (country and/or sea)

text: Zaragoza

characteristic: geographic location (region and locality)

characteristic: host age

text: Human

text: not provided

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text: male

characteristic: organism

text: SARS-CoV-2 genome COV005046

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characteristic: virus identifier


text: IBV-CSIC

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text: Zaragoza

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text: female

characteristic: host sex

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text: SARS-CoV-2 genome COV005047


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text: IBV-CSIC

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text: public

characteristic: Submitter Id

characteristic: collection date

text: WGA sequencing of SARS-CoV-2 samples

text: Spain

characteristic: geographic location (country and/or sea)

text: Zaragoza

characteristic: geographic location (region and locality)

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text: Human

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text: SARS-CoV-2 genome COV005048


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characteristic: geographic location (latitude)

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text: Zaragoza

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characteristic: organism

text: SARS-CoV-2 genome COV005052

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text: WGA sequencing of SARS-CoV-2 samples

text: Spain

characteristic: geographic location (country and/or sea)

text: Alcaniz

characteristic: geographic location (region and locality)

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text: Human

text: not provided

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text: male

characteristic: host sex

characteristic: host subject id

characteristic: isolate

text: SARS-CoV-2 genome COV005054


text: IBV-CSIC

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text: Zaragoza

text: Human

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text: female

text: SARS-CoV-2 genome COV005057


characteristic: ENA-CHECKLIST

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text: IBV-CSIC

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text: public

characteristic: Submitter Id

characteristic: collection date

text: WGA sequencing of SARS-CoV-2 samples

text: Spain

characteristic: geographic location (country and/or sea)

text: Zaragoza

characteristic: geographic location (region and locality)

characteristic: host age

text: Human

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text: female

characteristic: organism

text: SARS-CoV-2 genome COV005058

characteristic: title

characteristic: virus identifier


text: IBV-CSIC

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characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Zaragoza

text: Human

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text: female

characteristic: host sex

characteristic: host subject id

characteristic: isolate

text: SARS-CoV-2 genome COV005061


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text: IBV-CSIC

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text: public

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text: WGA sequencing of SARS-CoV-2 samples

text: Spain

characteristic: geographic location (country and/or sea)

text: Zaragoza

characteristic: geographic location (region and locality)

characteristic: host age

text: Human

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text: not provided

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text: Homo sapiens

characteristic: host scientific name

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text: SARS-CoV-2 genome COV005064


text: IBV-CSIC

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characteristic: geographic location (latitude)

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text: Zaragoza

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text: not provided

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characteristic: organism

text: SARS-CoV-2 genome COV005065

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characteristic: collection date

text: WGA sequencing of SARS-CoV-2 samples

text: Spain

characteristic: geographic location (country and/or sea)

text: Zaragoza

characteristic: geographic location (region and locality)

characteristic: host age

text: Human

text: not provided

text: Homo sapiens

text: female

characteristic: host sex

characteristic: host subject id

characteristic: isolate

text: SARS-CoV-2 genome COV005066


text: IBV-CSIC

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characteristic: description

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characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Zaragoza

text: Human

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text: Homo sapiens

characteristic: host scientific name

text: female

text: SARS-CoV-2 genome COV005070


characteristic: ENA-CHECKLIST

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text: IBV-CSIC

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text: WGA sequencing of SARS-CoV-2 samples

text: Spain

characteristic: geographic location (country and/or sea)

text: Zaragoza

characteristic: geographic location (region and locality)

characteristic: host age

text: Human

text: not provided

text: Homo sapiens

text: female

characteristic: organism

text: SARS-CoV-2 genome COV005076

characteristic: title

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text: IBV-CSIC

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text: WGA sequencing of SARS-CoV-2 samples

characteristic: description

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characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Alcaniz

text: Human

text: not provided

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text: male

characteristic: host sex

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text: SARS-CoV-2 genome COV005077


characteristic: ENA-CHECKLIST

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text: WGA sequencing of SARS-CoV-2 samples

text: Spain

characteristic: geographic location (country and/or sea)

text: Zaragoza

characteristic: geographic location (region and locality)

characteristic: host age

text: Human

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text: not provided

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text: Homo sapiens

characteristic: host scientific name

text: female

text: SARS-CoV-2 genome COV005078


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characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Zaragoza

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text: female

characteristic: organism

text: SARS-CoV-2 genome COV005092

characteristic: title

characteristic: virus identifier


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text: WGA sequencing of SARS-CoV-2 samples

text: Spain

characteristic: geographic location (country and/or sea)

text: Zaragoza

characteristic: geographic location (region and locality)

characteristic: host age

text: Human

text: not provided

text: Homo sapiens

text: female

characteristic: host sex

characteristic: host subject id

characteristic: isolate

text: SARS-CoV-2 genome COV005098


text: IBV-CSIC

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text: WGA sequencing of SARS-CoV-2 samples

characteristic: description

text: Spain

characteristic: geographic location (latitude)

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text: Zaragoza

text: Human

characteristic: host common name

text: not provided

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text: Homo sapiens

characteristic: host scientific name

text: female

text: SARS-CoV-2 genome COV005100


characteristic: ENA-CHECKLIST

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text: public

characteristic: Submitter Id

characteristic: collection date

text: WGA sequencing of SARS-CoV-2 samples

text: Spain

characteristic: geographic location (country and/or sea)

text: Zaragoza

characteristic: geographic location (region and locality)

characteristic: host age

text: Human

text: not provided

text: Homo sapiens

text: female

characteristic: organism

text: SARS-CoV-2 genome COV005101

characteristic: title

characteristic: virus identifier


text: IBV-CSIC

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text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Zaragoza

text: Human

text: not provided

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text: female

characteristic: host sex

characteristic: host subject id

characteristic: isolate

text: SARS-CoV-2 genome COV005103


characteristic: ENA-CHECKLIST

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characteristic: External Id

text: IBV-CSIC

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text: WGA sequencing of SARS-CoV-2 samples

text: Spain

characteristic: geographic location (country and/or sea)

text: Zaragoza

characteristic: geographic location (region and locality)

characteristic: host age

text: Human

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text: Homo sapiens

characteristic: host scientific name

text: female

text: SARS-CoV-2 genome COV005106


text: IBV-CSIC

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text: WGA sequencing of SARS-CoV-2 samples

characteristic: description

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characteristic: geographic location (latitude)

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text: Zaragoza

text: Human

text: not provided

text: Homo sapiens

text: female

characteristic: organism

text: SARS-CoV-2 genome COV005109

characteristic: title

characteristic: virus identifier


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text: WGA sequencing of SARS-CoV-2 samples

text: Spain

characteristic: geographic location (country and/or sea)

text: Alcaniz

characteristic: geographic location (region and locality)

characteristic: host age

text: Human

text: not provided

text: Homo sapiens

text: female

characteristic: host sex

characteristic: host subject id

characteristic: isolate

text: SARS-CoV-2 genome COV005110


text: IBV-CSIC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collecting institution

characteristic: collector name

characteristic: common name

text: WGA sequencing of SARS-CoV-2 samples

characteristic: description

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Alcaniz

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

text: SARS-CoV-2 genome COV005111


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IBV-CSIC

characteristic: INSDC center name

text: public

characteristic: Submitter Id

characteristic: collection date

text: WGA sequencing of SARS-CoV-2 samples

text: Spain

characteristic: geographic location (country and/or sea)

text: Zaragoza

characteristic: geographic location (region and locality)

characteristic: host age

text: Human

text: not provided

text: Homo sapiens

text: female

characteristic: organism

text: SARS-CoV-2 genome COV005113

characteristic: title

characteristic: virus identifier


text: IBV-CSIC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collecting institution

characteristic: collector name

characteristic: common name

text: WGA sequencing of SARS-CoV-2 samples

characteristic: description

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Zaragoza

text: Human

text: not provided

text: Homo sapiens

text: female

characteristic: host sex

characteristic: host subject id

characteristic: isolate

text: SARS-CoV-2 genome COV005115


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IBV-CSIC

characteristic: INSDC center name

text: public

characteristic: Submitter Id

characteristic: collection date

text: WGA sequencing of SARS-CoV-2 samples

text: Spain

characteristic: geographic location (country and/or sea)

text: Zaragoza

characteristic: geographic location (region and locality)

characteristic: host age

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

text: SARS-CoV-2 genome COV005117


text: IBV-CSIC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collecting institution

characteristic: collector name

characteristic: common name

text: WGA sequencing of SARS-CoV-2 samples

characteristic: description

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Zaragoza

text: Human

text: not provided

text: Homo sapiens

text: female

characteristic: organism

text: SARS-CoV-2 genome COV005120

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IBV-CSIC

characteristic: INSDC center name

text: public

characteristic: Submitter Id

characteristic: collection date

text: WGA sequencing of SARS-CoV-2 samples

text: Spain

characteristic: geographic location (country and/or sea)

text: Zaragoza

characteristic: geographic location (region and locality)

characteristic: host age

text: Human

text: not provided

text: Homo sapiens

text: female

characteristic: host sex

characteristic: host subject id

characteristic: isolate

text: SARS-CoV-2 genome COV005125


text: IBV-CSIC

characteristic: INSDC first public

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collecting institution

characteristic: collector name

characteristic: common name

text: WGA sequencing of SARS-CoV-2 samples

characteristic: description

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Alcaniz

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

text: SARS-CoV-2 genome COV005126


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IBV-CSIC

characteristic: INSDC center name

text: public

characteristic: Submitter Id

characteristic: collection date

text: WGA sequencing of SARS-CoV-2 samples

text: Spain

characteristic: geographic location (country and/or sea)

text: Zaragoza

characteristic: geographic location (region and locality)

characteristic: host age

text: Human

text: not provided

text: Homo sapiens

text: female

characteristic: organism

text: SARS-CoV-2 genome COV005128

characteristic: title

characteristic: virus identifier


text: IBV-CSIC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collecting institution

characteristic: collector name

characteristic: common name

text: WGA sequencing of SARS-CoV-2 samples

characteristic: description

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Zaragoza

text: Human

text: not provided

text: Homo sapiens

text: male

characteristic: host sex

characteristic: host subject id

characteristic: isolate

text: SARS-CoV-2 genome COV005129


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IBV-CSIC

characteristic: INSDC center name

text: public

characteristic: Submitter Id

characteristic: collection date

text: WGA sequencing of SARS-CoV-2 samples

text: Spain

characteristic: geographic location (country and/or sea)

text: Zaragoza

characteristic: geographic location (region and locality)

characteristic: host age

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

text: SARS-CoV-2 genome COV005134


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Institute for Infectious Diseases, Bern, Switzerland

text: Institute for Infectious Diseases, University of Bern, Switzerland

characteristic: collecting institution

text: IFIK, KM

characteristic: collector name

text: Human adenovirus 1

characteristic: common name

text: Clinical sample subjected to human adenovirus screening and sequencing

characteristic: description

text: Switzerland

text: Bern

unit: centuries

text: human

text: diseased

text: Homo sapiens

text: female

text: upper respiratory tract

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text: Human adenovirus 1

characteristic: organism

characteristic: receipt date

text: Human adenovirus 1

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institute for Infectious Diseases, Bern, Switzerland

characteristic: INSDC center name

text: public

characteristic: Submitter Id

characteristic: collection date

text: IFIK, KM

text: Human adenovirus 1

text: Switzerland

characteristic: geographic location (country and/or sea)

text: Bern

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: diseased

text: Homo sapiens

text: male

characteristic: host sex

characteristic: host subject id

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text: lower respiratory tract

text: Human adenovirus 1

text: Human adenovirus 1


characteristic: INSDC first public

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text: public

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characteristic: SRA accession

characteristic: collecting institution

text: IFIK, KM

characteristic: collector name

text: Human adenovirus 1

characteristic: common name

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text: Switzerland

text: Bern

text: human

characteristic: host common name

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

text: stool

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text: Human adenovirus 1

characteristic: organism

text: Human adenovirus 1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

characteristic: Submitter Id

characteristic: collection date

text: IFIK, KM

text: Human adenovirus 2

text: Switzerland

characteristic: geographic location (country and/or sea)

text: Bern

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: diseased

text: Homo sapiens

text: male

text: stool

text: Human adenovirus 2

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text: Human adenovirus 2

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characteristic: virus identifier


characteristic: INSDC first public

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text: public

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characteristic: SRA accession

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text: IFIK, KM

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text: Switzerland

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text: diseased

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text: Homo sapiens

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characteristic: host sex

characteristic: host subject id

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text: lower respiratory tract

text: Human adenovirus 2

text: Human adenovirus 2


characteristic: ENA-CHECKLIST

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characteristic: External Id

characteristic: INSDC center name

text: public

characteristic: Submitter Id

characteristic: collection date

text: IFIK, KM

text: Human adenovirus 2

text: Switzerland

characteristic: geographic location (country and/or sea)

text: Bern

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: diseased

text: Homo sapiens

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text: female

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text: Human adenovirus 2

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text: Human adenovirus 2


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text: public

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characteristic: SRA accession

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text: IFIK, KM

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text: Switzerland

text: Bern

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text: Homo sapiens

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text: Human adenovirus 2

characteristic: receipt date

text: Human adenovirus 2

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characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

characteristic: Submitter Id

characteristic: collection date

text: IFIK, KM

text: Human adenovirus 2

text: Switzerland

characteristic: geographic location (country and/or sea)

text: Bern

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: diseased

text: Homo sapiens

text: male

characteristic: host sex

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text: upper respiratory tract

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text: Human adenovirus 2


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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collecting institution

text: IFIK, KM

characteristic: collector name

text: Human adenovirus 5

characteristic: common name

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text: Switzerland

text: Bern

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text: diseased

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text: Homo sapiens

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text: female

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text: Human adenovirus 5

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text: Human adenovirus 5


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

characteristic: Submitter Id

characteristic: collection date

text: IFIK, KM

text: Human adenovirus 5

text: Switzerland

characteristic: geographic location (country and/or sea)

text: Bern

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: diseased

text: Homo sapiens

text: female

text: stool

text: Human adenovirus 5

characteristic: receipt date

text: Human adenovirus 5

characteristic: title

characteristic: virus identifier


text: NVRL

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Limerick

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

text: active surveillance in response to outbreak

characteristic: sample capture status

text: hCoV-19/Ireland/LK-NVRL-M30IRL91971/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cavan

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

text: hCoV-19/Ireland/CN-NVRL-M31IRL15207/2021

characteristic: title

characteristic: virus identifier


text: NVRL

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text: public

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characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Westmeath

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/WH-NVRL-M31IRL01010/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

characteristic: sample capture status

characteristic: title


text: NVRL

characteristic: INSDC first public

characteristic: INSDC last update

text: public

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characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Tipperary

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

characteristic: host sex

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/TA-NVRL-M31IRL12952/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Clare

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/CE-NVRL-M31IRL01283/2021


text: NVRL

characteristic: INSDC first public

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text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Donegal

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

characteristic: host sex

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/DL-NVRL-M31IRL06007/2021

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Limerick

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

text: hCoV-19/Ireland/LK-NVRL-M31IRL19332/2021

characteristic: virus identifier


text: NVRL

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text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cork

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

characteristic: host sex

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Clare

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

text: hCoV-19/Ireland/CE-NVRL-M31IRL01269/2021

characteristic: title


text: NVRL

characteristic: INSDC first public

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text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Westmeath

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

characteristic: host sex

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/WH-NVRL-M31IRL01001/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Limerick

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/LK-NVRL-M31IRL18938/2021


text: NVRL

characteristic: INSDC first public

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text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Clare

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

characteristic: host sex

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CE-NVRL-M31IRL17646/2021

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

characteristic: virus identifier


text: NVRL

characteristic: INSDC first public

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text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cavan

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

characteristic: host sex

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/CN-NVRL-M31IRL15211/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Limerick

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

text: hCoV-19/Ireland/LK-NVRL-M30IRL90473/2021

characteristic: title


text: NVRL

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text: public

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characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Limerick

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

characteristic: host sex

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/LK-NVRL-M30IRL89631/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Limerick

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/LK-NVRL-M31IRL18951/2021


text: NVRL

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text: public

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characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Limerick

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

characteristic: host sex

text: not provided

text: Oro-Nasopharyngeal swab

text: active surveillance in response to outbreak

text: hCoV-19/Ireland/LK-NVRL-M31IRL19501/2021

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Clare

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

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text: hCoV-19/Ireland/CE-NVRL-M31IRL17649/2021

characteristic: virus identifier


text: NVRL

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

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text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Limerick

text: human

characteristic: host common name

text: not provided

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text: Homo sapiens

text: male

characteristic: host sex

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/LK-NVRL-M31IRL19355/2021


characteristic: ENA-CHECKLIST

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characteristic: External Id

text: NVRL

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text: public

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Galway

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

text: Homo sapiens

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text: female

text: not provided

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text: Oro-Nasopharyngeal swab

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text: NVRL

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

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text: not provided

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text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Kerry

text: human

characteristic: host common name

text: not provided

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text: Homo sapiens

text: male

characteristic: host sex

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/KY-NVRL-M31IRL05076/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

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text: NVRL

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text: public

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

text: not provided

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text: Oro-Nasopharyngeal swab

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text: NVRL

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

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text: not provided

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text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Donegal

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

characteristic: host sex

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/DL-NVRL-M31IRL05996/2021

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

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text: public

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Westmeath

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

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characteristic: organism

text: hCoV-19/Ireland/WH-NVRL-M31IRL00941/2021

characteristic: virus identifier


text: NVRL

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text: public

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

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text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Kildare

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

characteristic: host sex

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/KE-NVRL-M31IRL01416/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

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characteristic: External Id

text: NVRL

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text: public

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

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text: NVRL

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text: public

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characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Louth

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

characteristic: host sex

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/LH-NVRL-M31IRL02999/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

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text: NVRL

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text: public

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Limerick

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/LK-NVRL-M31IRL07231/2021


text: NVRL

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text: public

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

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text: not provided

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text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Donegal

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

characteristic: host sex

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/DL-NVRL-M31IRL06009/2021

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

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characteristic: External Id

text: NVRL

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text: public

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

text: Homo sapiens

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text: male

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

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characteristic: virus identifier


text: NVRL

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text: public

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Laois

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

characteristic: host sex

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/LS-NVRL-M31IRL12412/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

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characteristic: External Id

text: NVRL

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text: public

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Clare

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

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text: hCoV-19/Ireland/CE-NVRL-M31IRL17651/2021

characteristic: title


text: NVRL

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text: public

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

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text: not provided

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text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Louth

text: human

characteristic: host common name

text: not provided

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text: Homo sapiens

text: female

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text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/LH-NVRL-M31IRL15128/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

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text: NVRL

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

text: Homo sapiens

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text: female

text: not provided

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text: Oro-Nasopharyngeal swab

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text: NVRL

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

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text: not provided

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text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Donegal

text: human

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text: not provided

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text: Homo sapiens

text: male

characteristic: host sex

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/DL-NVRL-M31IRL05975/2021

characteristic: title


characteristic: ENA-CHECKLIST

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characteristic: External Id

text: NVRL

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text: public

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Limerick

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

text: Homo sapiens

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text: not provided

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text: active surveillance in response to outbreak

text: hCoV-19/Ireland/LK-NVRL-M31IRL00894/2021

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text: NVRL

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

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text: not provided

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text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Tipperary

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

characteristic: host sex

text: not provided

text: Oro-Nasopharyngeal swab

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text: hCoV-19/Ireland/TA-NVRL-M31IRL02125/2021


characteristic: ENA-CHECKLIST

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characteristic: External Id

text: NVRL

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text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Laois

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

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text: hCoV-19/Ireland/LS-NVRL-M31IRL12360/2021

characteristic: title


text: NVRL

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text: public

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

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text: not provided

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text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Meath

text: human

characteristic: host common name

text: not provided

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text: Homo sapiens

text: female

characteristic: host sex

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/MH-NVRL-M31IRL17438/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

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text: NVRL

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Laois

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: Homo sapiens

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text: male

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

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characteristic: organism

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text: hCoV-19/Ireland/LS-NVRL-M31IRL12362/2021


text: NVRL

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

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text: not provided

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text: Human coronavirus 2019

characteristic: common name

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text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Limerick

text: human

characteristic: host common name

text: not provided

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text: Homo sapiens

text: female

characteristic: host sex

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/LK-NVRL-M31IRL12993/2021

characteristic: title


characteristic: ENA-CHECKLIST

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text: NVRL

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Laois

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

text: Homo sapiens

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text: not provided

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text: Oro-Nasopharyngeal swab

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text: hCoV-19/Ireland/LS-NVRL-M31IRL12341/2021

characteristic: virus identifier


text: NVRL

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

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text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Laois

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

characteristic: host sex

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/LS-NVRL-M31IRL12439/2021


characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

text: public

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Donegal

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: Severe acute respiratory syndrome coronavirus 2

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text: hCoV-19/Ireland/DL-NVRL-M31IRL19851/2021

characteristic: title


text: NVRL

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text: public

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

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text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Offaly

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

characteristic: host sex

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/OY-NVRL-M31IRL12230/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

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text: NVRL

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text: public

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Louth

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/LH-NVRL-G21IRL63820/2021


text: NVRL

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characteristic: SRA accession

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characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Donegal

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

characteristic: host sex

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/DL-NVRL-M31IRL19751/2021

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

characteristic: virus identifier


text: NVRL

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Limerick

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

characteristic: host sex

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/LK-NVRL-M31IRL13062/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

characteristic: title


text: NVRL

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

characteristic: host sex

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Westmeath

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/WH-NVRL-M31IRL08818/2021


text: NVRL

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Kildare

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

characteristic: host sex

text: not provided

text: Oro-Nasopharyngeal swab

text: active surveillance in response to outbreak

text: hCoV-19/Ireland/KE-NVRL-M31IRL01586/2021

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Clare

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

text: hCoV-19/Ireland/CE-NVRL-M31IRL01295/2021

characteristic: virus identifier


text: NVRL

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Offaly

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

characteristic: host sex

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/OY-NVRL-M31IRL01095/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

characteristic: title


text: NVRL

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Kerry

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

characteristic: host sex

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/KY-NVRL-M31IRL05062/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NORWEGIAN INSTITUTE OF PUBLIC HEALTH

characteristic: INSDC center name

text: public

tag: Namespace:NORWEGIAN INSTITUTE OF PUBLIC HEALTH

characteristic: Submitter Id

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: O145H25 STEC


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Institute of Food Safety, Animal Health and Environment BIOR

characteristic: collection date

text: Lm isolated from soil of cattle farms

text: Latvia

characteristic: geographic location (country and/or sea)

text: healthy

text: Bos taurus

characteristic: host scientific name

characteristic: isolate

text: Soil

characteristic: isolation source

text: Listeria monocytogenes

text: Listeria monocytogenes

text: Environment Listeria

characteristic: title


characteristic: ENA-CHECKLIST

text: Institute of Food Safety, Animal Health and Environment BIOR

text: public

text: Lm isolated from soil of cattle farms

characteristic: description

text: Latvia

text: healthy

characteristic: host health state

text: Bos taurus

text: Soil

text: Listeria monocytogenes

text: Listeria monocytogenes

text: Environment Listeria


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Lm isolated from feed of cattle farms

text: Latvia

text: healthy

text: Bos taurus

text: Feed

text: Listeria monocytogenes

text: Listeria monocytogenes

text: Environment Listeria


characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: Lm isolated from feces of asymptomatic cattles

text: Latvia

text: healthy

text: Bos taurus

text: Feces

text: Listeria monocytogenes

characteristic: organism

text: Listeria monocytogenes

text: Environment Listeria


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Lm isolated from drinking water of cattle farms

text: Latvia

text: healthy

text: Bos taurus

text: Water

text: Listeria monocytogenes

text: Listeria monocytogenes

text: Environment Listeria


text: INSTITUT PASTEUR

text: public

characteristic: SRA accession

tag: Namespace:INSTITUT PASTEUR

text: Paenibacillus solanacearum

text: Paenibacillus solanacearum

text: whole genome sequencing of Paenibacillus solanacearum CIP 111600 = KACC 18654 = NBRC 111896


text: IBV-CSIC

text: public

text: Servicio de Microbiología. Consorcio Hospital General Universitario de Valencia and SeqCOVID-Spain consortium

characteristic: collecting institution

characteristic: collection date

text: María Dolores Ocete, Begoña Fuster Escrivá, Carme Salvador García, Rafael Medina González, Concepción Gimeno Cardona and SeqCOVID-Spain consortium

characteristic: collector name

characteristic: common name

text: WGA sequencing of SARS-CoV-2 samples

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Torrent

characteristic: geographic location (region and locality)

characteristic: host age

text: Human

characteristic: host common name

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

characteristic: host subject id

text: Severe acute respiratory syndrome coronavirus 2

text: SARS-CoV-2 genome COV000036

characteristic: virus identifier