text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MARY ALICE COFFROTH

text: University at Buffalo

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

text: dinoflagellate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Unknown

text: vegetative cell

text: Breviolum psygmophilum

text: not applicable

text: JOHN PARKINSON

text: UNIVERSITY OF SOUTH FLORIDA

text: metagenome-assembled genome

text: Dinoflagellate: Breviolum psygmophilum

text: marine biome

characteristic: local environmental context

text: dinoflagellate metagenome

text: Balneolaceae bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: Balneolaceae bacterium

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: GTDB-TK (version 2.3.2); GTDB (release 214)

text: 8bdb819f-897e-4bf4-8cfd-ed2fa6458a51-asg-MAGScoT_cleanbin_000023

characteristic: title

characteristic: tolid


status: PUBLIC

text: Yes

tag: attribute

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

text: MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); MaxBin (version 2.7)

text: aquatic biome

text: MARY ALICE COFFROTH

text: University at Buffalo

text: checkM (version 1.2.1); checkM_DB (release 2015-01-16)

characteristic: contamination score

text: dinoflagellate culture

text: USA

text: not collected

unit: DD

text: not collected

text: University Park, PA | Pennsylvania State University

characteristic: geographic location (region and locality)

text: Unknown

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Breviolum psygmophilum

characteristic: host scientific name

text: not applicable

characteristic: host sex

characteristic: host taxid

text: JOHN PARKINSON

text: UNIVERSITY OF SOUTH FLORIDA

text: metagenome-assembled genome

characteristic: investigation type

text: Dinoflagellate: Breviolum psygmophilum

text: marine biome

text: dinoflagellate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Phototrophicaceae bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: sample derived from

text: Phototrophicaceae bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

text: taxonomic novelty determined using RED

characteristic: taxonomic identity marker

text: 9a07bd8a-3de6-4a65-a639-7fba091dd586-asg-MAGScoT_cleanbin_000031


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MARY ALICE COFFROTH

text: University at Buffalo

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

text: dinoflagellate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Unknown

text: vegetative cell

text: Breviolum psygmophilum

text: not applicable

text: JOHN PARKINSON

text: UNIVERSITY OF SOUTH FLORIDA

text: metagenome-assembled genome

text: Dinoflagellate: Breviolum psygmophilum

text: marine biome

characteristic: local environmental context

text: dinoflagellate metagenome

text: Longimicrobiales bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: Longimicrobiales bacterium

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: taxonomic classification defined by topology and ANI

text: 6353df98-31e2-49de-988c-97e44199e14f-asg-MAGScoT_cleanbin_000035

characteristic: title

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

text: aquatic biome

text: MARY ALICE COFFROTH

text: University at Buffalo

characteristic: contamination score

text: dinoflagellate culture

text: USA

text: not collected

text: not collected

characteristic: geographic location (region and locality)

text: Unknown

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Breviolum psygmophilum

characteristic: host scientific name

text: not applicable

characteristic: host sex

characteristic: host taxid

text: JOHN PARKINSON

text: UNIVERSITY OF SOUTH FLORIDA

text: metagenome-assembled genome

characteristic: investigation type

text: Dinoflagellate: Breviolum psygmophilum

text: marine biome

text: dinoflagellate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Phycisphaerales bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: sample derived from

text: Phycisphaerales bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

text: taxonomic classification fully defined by topology

characteristic: taxonomic identity marker

text: 917af7ce-00be-44aa-be86-61d2f5bd4306-asg-MAGScoT_cleanbin_000038


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MARY ALICE COFFROTH

text: University at Buffalo

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

text: dinoflagellate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Unknown

text: vegetative cell

text: Breviolum psygmophilum

text: not applicable

text: JOHN PARKINSON

text: UNIVERSITY OF SOUTH FLORIDA

text: metagenome-assembled genome

text: Dinoflagellate: Breviolum psygmophilum

text: marine biome

characteristic: local environmental context

text: dinoflagellate metagenome

text: Lacipirellulaceae bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: Lacipirellulaceae bacterium

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: 234f8b4f-acd0-43f5-938d-04523d6fc22b-asg-MAGScoT_cleanbin_000043

characteristic: title

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

text: aquatic biome

text: MARY ALICE COFFROTH

text: University at Buffalo

characteristic: contamination score

text: dinoflagellate culture

text: USA

text: not collected

text: not collected

characteristic: geographic location (region and locality)

text: Unknown

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Breviolum psygmophilum

characteristic: host scientific name

text: not applicable

characteristic: host sex

characteristic: host taxid

text: JOHN PARKINSON

text: UNIVERSITY OF SOUTH FLORIDA

text: metagenome-assembled genome

characteristic: investigation type

text: Dinoflagellate: Breviolum psygmophilum

text: marine biome

text: dinoflagellate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Bremerella sp.

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: sample derived from

text: Bremerella sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: ac7d488a-c4fa-46db-8e68-7c665f4298e8-asg-MAGScoT_cleanbin_000040


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MARY ALICE COFFROTH

text: University at Buffalo

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

text: dinoflagellate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Unknown

text: vegetative cell

text: Breviolum psygmophilum

text: not applicable

text: JOHN PARKINSON

text: UNIVERSITY OF SOUTH FLORIDA

text: metagenome-assembled genome

text: Dinoflagellate: Breviolum psygmophilum

text: marine biome

characteristic: local environmental context

text: dinoflagellate metagenome

text: Henriciella sp.

characteristic: organism

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: Henriciella sp.

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: 3ba118c9-9fc6-478a-88ea-db4d8ab8ade9-asg-MAGScoT_cleanbin_000001

characteristic: title

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

text: aquatic biome

text: MARY ALICE COFFROTH

text: University at Buffalo

characteristic: contamination score

text: dinoflagellate culture

text: USA

text: not collected

text: not collected

characteristic: geographic location (region and locality)

text: Unknown

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Breviolum psygmophilum

characteristic: host scientific name

text: not applicable

characteristic: host sex

characteristic: host taxid

text: JOHN PARKINSON

text: UNIVERSITY OF SOUTH FLORIDA

text: metagenome-assembled genome

characteristic: investigation type

text: Dinoflagellate: Breviolum psygmophilum

text: marine biome

text: dinoflagellate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Hyphomonadaceae bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: sample derived from

text: Hyphomonadaceae bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: 675709ac-26c0-46c4-a987-9a2202c63549-asg-MAGScoT_cleanbin_000029


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MARY ALICE COFFROTH

text: University at Buffalo

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

text: dinoflagellate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Unknown

text: vegetative cell

text: Breviolum psygmophilum

text: not applicable

text: JOHN PARKINSON

text: UNIVERSITY OF SOUTH FLORIDA

text: metagenome-assembled genome

text: Dinoflagellate: Breviolum psygmophilum

text: marine biome

characteristic: local environmental context

text: dinoflagellate metagenome

text: Hyphobacterium sp.

characteristic: organism

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: Hyphobacterium sp.

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: ANI

text: ebfe9cd3-67f8-46d7-b8b7-24334b6d1504-asg-MAGScoT_cleanbin_000028

characteristic: title

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

text: aquatic biome

text: MARY ALICE COFFROTH

text: University at Buffalo

characteristic: contamination score

text: dinoflagellate culture

text: USA

text: not collected

text: not collected

characteristic: geographic location (region and locality)

text: Unknown

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Breviolum psygmophilum

characteristic: host scientific name

text: not applicable

characteristic: host sex

characteristic: host taxid

text: JOHN PARKINSON

text: UNIVERSITY OF SOUTH FLORIDA

text: metagenome-assembled genome

characteristic: investigation type

text: Dinoflagellate: Breviolum psygmophilum

text: marine biome

text: dinoflagellate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: uncultured Maricaulis sp.

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: sample derived from

text: uncultured Maricaulis sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: d59b4ef1-c8d9-4e2f-b5fa-8aa9946c396a-asg-MAGScoT_cleanbin_000003


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MARY ALICE COFFROTH

text: University at Buffalo

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

text: dinoflagellate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Unknown

text: vegetative cell

text: Breviolum psygmophilum

text: not applicable

text: JOHN PARKINSON

text: UNIVERSITY OF SOUTH FLORIDA

text: metagenome-assembled genome

text: Dinoflagellate: Breviolum psygmophilum

text: marine biome

characteristic: local environmental context

text: dinoflagellate metagenome

text: Pyruvatibacter mobilis

characteristic: organism

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: Pyruvatibacter mobilis

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: GTDB-TK (version 2.3.2); GTDB (release 214)

text: 4e043ac2-8979-4f2d-babd-ee5dd5d673cf-asg-MAGScoT_cleanbin_000012

characteristic: title

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

text: aquatic biome

text: MARY ALICE COFFROTH

text: University at Buffalo

characteristic: contamination score

text: dinoflagellate culture

text: USA

text: not collected

text: not collected

characteristic: geographic location (region and locality)

text: Unknown

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Breviolum psygmophilum

characteristic: host scientific name

text: not applicable

characteristic: host sex

characteristic: host taxid

text: JOHN PARKINSON

text: UNIVERSITY OF SOUTH FLORIDA

text: metagenome-assembled genome

characteristic: investigation type

text: Dinoflagellate: Breviolum psygmophilum

text: marine biome

text: dinoflagellate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Rhizobiaceae bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: sample derived from

text: Rhizobiaceae bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: 9c37dd04-ec55-42de-b7ee-c62b950d935d-asg-MAGScoT_cleanbin_000010


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

text: MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); MaxBin (version 2.7)

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MARY ALICE COFFROTH

text: University at Buffalo

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

text: checkM (version 1.2.1); checkM_DB (release 2015-01-16)

characteristic: completeness software

text: dinoflagellate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Unknown

text: vegetative cell

text: Breviolum psygmophilum

text: not applicable

text: JOHN PARKINSON

text: UNIVERSITY OF SOUTH FLORIDA

text: metagenome-assembled genome

text: Dinoflagellate: Breviolum psygmophilum

text: marine biome

characteristic: local environmental context

text: dinoflagellate metagenome

text: Hoeflea sp.

characteristic: organism

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: Hoeflea sp.

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: ca16b8c9-36e6-453e-b725-f16d08fa36cf-asg-MAGScoT_cleanbin_000020

characteristic: title

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

text: aquatic biome

text: MARY ALICE COFFROTH

text: University at Buffalo

characteristic: contamination score

text: dinoflagellate culture

text: USA

text: not collected

text: not collected

text: University Park, PA | Pennsylvania State University

characteristic: geographic location (region and locality)

text: Unknown

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Breviolum psygmophilum

characteristic: host scientific name

text: not applicable

characteristic: host sex

characteristic: host taxid

text: JOHN PARKINSON

text: UNIVERSITY OF SOUTH FLORIDA

text: metagenome-assembled genome

characteristic: investigation type

text: Dinoflagellate: Breviolum psygmophilum

text: marine biome

text: dinoflagellate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Rhizobiaceae bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: sample derived from

text: Rhizobiaceae bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: 8c5f4b6f-ffb9-4ace-9e2b-7a2743c9a3ee-asg-MAGScoT_cleanbin_000034


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MARY ALICE COFFROTH

text: University at Buffalo

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

text: dinoflagellate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Unknown

text: vegetative cell

text: Breviolum psygmophilum

text: not applicable

text: JOHN PARKINSON

text: UNIVERSITY OF SOUTH FLORIDA

text: metagenome-assembled genome

text: Dinoflagellate: Breviolum psygmophilum

text: marine biome

characteristic: local environmental context

text: dinoflagellate metagenome

text: Roseibium sp.

characteristic: organism

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: Roseibium sp.

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: taxonomic classification defined by topology and ANI

text: 53e13de0-8f18-46ea-8143-c70c1218eb9c-asg-MAGScoT_cleanbin_000011

characteristic: title

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

text: aquatic biome

text: MARY ALICE COFFROTH

text: University at Buffalo

characteristic: contamination score

text: dinoflagellate culture

text: USA

text: not collected

text: not collected

characteristic: geographic location (region and locality)

text: Unknown

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Breviolum psygmophilum

characteristic: host scientific name

text: not applicable

characteristic: host sex

characteristic: host taxid

text: JOHN PARKINSON

text: UNIVERSITY OF SOUTH FLORIDA

text: metagenome-assembled genome

characteristic: investigation type

text: Dinoflagellate: Breviolum psygmophilum

text: marine biome

text: dinoflagellate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Roseibium aggregatum

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: sample derived from

text: Roseibium aggregatum

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: 424ee969-b1c1-4d2b-a20b-a9679df0b3eb-asg-MAGScoT_cleanbin_000024


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MARY ALICE COFFROTH

text: University at Buffalo

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

text: dinoflagellate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Unknown

text: vegetative cell

text: Breviolum psygmophilum

text: not applicable

text: JOHN PARKINSON

text: UNIVERSITY OF SOUTH FLORIDA

text: metagenome-assembled genome

text: Dinoflagellate: Breviolum psygmophilum

text: marine biome

characteristic: local environmental context

text: dinoflagellate metagenome

text: Roseovarius sp.

characteristic: organism

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: Roseovarius sp.

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: fcab3373-aa6d-4bec-b16a-1d9be85aad6f-asg-MAGScoT_cleanbin_000016

characteristic: title

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

text: aquatic biome

text: MARY ALICE COFFROTH

text: University at Buffalo

characteristic: contamination score

text: dinoflagellate culture

text: USA

text: not collected

text: not collected

characteristic: geographic location (region and locality)

text: Unknown

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Breviolum psygmophilum

characteristic: host scientific name

text: not applicable

characteristic: host sex

characteristic: host taxid

text: JOHN PARKINSON

text: UNIVERSITY OF SOUTH FLORIDA

text: metagenome-assembled genome

characteristic: investigation type

text: Dinoflagellate: Breviolum psygmophilum

text: marine biome

text: dinoflagellate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Roseovarius confluentis

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: sample derived from

text: Roseovarius confluentis

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: 17026629-e9ea-455b-991b-0013fe84bc73-asg-MAGScoT_cleanbin_000026


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MARY ALICE COFFROTH

text: University at Buffalo

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

text: dinoflagellate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Unknown

text: vegetative cell

text: Breviolum psygmophilum

text: not applicable

text: JOHN PARKINSON

text: UNIVERSITY OF SOUTH FLORIDA

text: metagenome-assembled genome

text: Dinoflagellate: Breviolum psygmophilum

text: marine biome

characteristic: local environmental context

text: dinoflagellate metagenome

text: Rhodospirillales bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: Rhodospirillales bacterium

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: da2743c5-98de-4a1b-852b-4e923ef405be-asg-MAGScoT_cleanbin_000013

characteristic: title

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

text: aquatic biome

text: MARY ALICE COFFROTH

text: University at Buffalo

characteristic: contamination score

text: dinoflagellate culture

text: USA

text: not collected

text: not collected

characteristic: geographic location (region and locality)

text: Unknown

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Breviolum psygmophilum

characteristic: host scientific name

text: not applicable

characteristic: host sex

characteristic: host taxid

text: JOHN PARKINSON

text: UNIVERSITY OF SOUTH FLORIDA

text: metagenome-assembled genome

characteristic: investigation type

text: Dinoflagellate: Breviolum psygmophilum

text: marine biome

text: dinoflagellate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Rhodospirillales bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: sample derived from

text: Rhodospirillales bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

text: taxonomic novelty determined using RED

characteristic: taxonomic identity marker

text: 31c28a96-7474-444d-91f1-dcec9bbdbe2f-asg-MAGScoT_cleanbin_000005


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MARY ALICE COFFROTH

text: University at Buffalo

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

text: dinoflagellate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Unknown

text: vegetative cell

text: Breviolum psygmophilum

text: not applicable

text: JOHN PARKINSON

text: UNIVERSITY OF SOUTH FLORIDA

text: metagenome-assembled genome

text: Dinoflagellate: Breviolum psygmophilum

text: marine biome

characteristic: local environmental context

text: dinoflagellate metagenome

text: Sphingomonadales bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: Sphingomonadales bacterium

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: taxonomic novelty determined using RED

text: c31bd26c-66b2-48be-909a-eb399b9243b4-asg-MAGScoT_cleanbin_000015

characteristic: title

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

text: aquatic biome

text: MARY ALICE COFFROTH

text: University at Buffalo

characteristic: contamination score

text: dinoflagellate culture

text: USA

text: not collected

text: not collected

characteristic: geographic location (region and locality)

text: Unknown

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Breviolum psygmophilum

characteristic: host scientific name

text: not applicable

characteristic: host sex

characteristic: host taxid

text: JOHN PARKINSON

text: UNIVERSITY OF SOUTH FLORIDA

text: metagenome-assembled genome

characteristic: investigation type

text: Dinoflagellate: Breviolum psygmophilum

text: marine biome

text: dinoflagellate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Alphaproteobacteria bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: sample derived from

text: Alphaproteobacteria bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

text: GTDB-TK (version 2.3.2); GTDB (release 214)

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: ac0d9bd6-f3d0-4eb0-b2b4-31c0d852bc29-asg-MAGScoT_cleanbin_000027


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MARY ALICE COFFROTH

text: University at Buffalo

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

text: dinoflagellate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Unknown

text: vegetative cell

text: Breviolum psygmophilum

text: not applicable

text: JOHN PARKINSON

text: UNIVERSITY OF SOUTH FLORIDA

text: metagenome-assembled genome

text: Dinoflagellate: Breviolum psygmophilum

text: marine biome

characteristic: local environmental context

text: dinoflagellate metagenome

text: Pacificispira sp.

characteristic: organism

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: Pacificispira sp.

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: 4e95503e-2c01-45fe-9748-ca44a535d95a-asg-MAGScoT_cleanbin_000036

characteristic: title

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

text: MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); MaxBin (version 2.7)

text: aquatic biome

text: MARY ALICE COFFROTH

text: University at Buffalo

characteristic: contamination score

text: dinoflagellate culture

text: USA

text: not collected

text: not collected

characteristic: geographic location (region and locality)

text: Unknown

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Breviolum psygmophilum

characteristic: host scientific name

text: not applicable

characteristic: host sex

characteristic: host taxid

text: JOHN PARKINSON

text: UNIVERSITY OF SOUTH FLORIDA

text: metagenome-assembled genome

characteristic: investigation type

text: Dinoflagellate: Breviolum psygmophilum

text: marine biome

text: dinoflagellate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Algiphilus sp.

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: sample derived from

text: Algiphilus sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: 8fdec62c-5003-47e8-bb5f-28de17256808-asg-MAGScoT_cleanbin_000025


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MARY ALICE COFFROTH

text: University at Buffalo

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

text: checkM (version 1.2.1); checkM_DB (release 2015-01-16)

characteristic: completeness software

text: dinoflagellate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Unknown

text: vegetative cell

text: Breviolum psygmophilum

text: not applicable

text: JOHN PARKINSON

text: UNIVERSITY OF SOUTH FLORIDA

text: metagenome-assembled genome

text: Dinoflagellate: Breviolum psygmophilum

text: marine biome

characteristic: local environmental context

text: dinoflagellate metagenome

text: uncultured Methylophaga sp.

characteristic: organism

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: uncultured Methylophaga sp.

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: 178ce76b-1620-4625-9fab-834215323926-asg-MAGScoT_cleanbin_000004

characteristic: title

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

text: aquatic biome

text: MARY ALICE COFFROTH

text: University at Buffalo

characteristic: contamination score

text: dinoflagellate culture

text: USA

text: not collected

text: not collected

text: University Park, PA | Pennsylvania State University

characteristic: geographic location (region and locality)

text: Unknown

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Breviolum psygmophilum

characteristic: host scientific name

text: not applicable

characteristic: host sex

characteristic: host taxid

text: JOHN PARKINSON

text: UNIVERSITY OF SOUTH FLORIDA

text: metagenome-assembled genome

characteristic: investigation type

text: Dinoflagellate: Breviolum psygmophilum

text: marine biome

text: dinoflagellate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Pseudomonadales bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: sample derived from

text: Pseudomonadales bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: 28d5d976-0bb2-4ab0-8390-11c2e1728a84-asg-MAGScoT_cleanbin_000014


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MARY ALICE COFFROTH

text: University at Buffalo

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

text: dinoflagellate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Unknown

text: vegetative cell

text: Breviolum psygmophilum

text: not applicable

text: JOHN PARKINSON

text: UNIVERSITY OF SOUTH FLORIDA

text: metagenome-assembled genome

text: Dinoflagellate: Breviolum psygmophilum

text: marine biome

characteristic: local environmental context

text: dinoflagellate metagenome

text: Marinobacter salarius

characteristic: organism

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: Marinobacter salarius

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: b120069e-ec39-471c-bbae-c5feab55e9d4-asg-MAGScoT_cleanbin_000008

characteristic: title

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

text: aquatic biome

text: MARY ALICE COFFROTH

text: University at Buffalo

characteristic: contamination score

text: dinoflagellate culture

text: USA

text: not collected

text: not collected

characteristic: geographic location (region and locality)

text: Unknown

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Breviolum psygmophilum

characteristic: host scientific name

text: not applicable

characteristic: host sex

characteristic: host taxid

text: JOHN PARKINSON

text: UNIVERSITY OF SOUTH FLORIDA

text: metagenome-assembled genome

characteristic: investigation type

text: Dinoflagellate: Breviolum psygmophilum

text: marine biome

text: dinoflagellate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Marinobacter sp.

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: sample derived from

text: Marinobacter sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: 40e4e481-aaa4-43ca-adba-667ab741076b-asg-MAGScoT_cleanbin_000006


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MARY ALICE COFFROTH

text: University at Buffalo

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

text: dinoflagellate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Unknown

text: vegetative cell

text: Breviolum psygmophilum

text: not applicable

text: JOHN PARKINSON

text: UNIVERSITY OF SOUTH FLORIDA

text: metagenome-assembled genome

text: Dinoflagellate: Breviolum psygmophilum

text: marine biome

characteristic: local environmental context

text: dinoflagellate metagenome

text: uncultured Pseudohongiella sp.

characteristic: organism

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: uncultured Pseudohongiella sp.

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: taxonomic classification defined by topology and ANI

text: a96d9bb3-ac47-4cd2-9796-3ffb1221adbf-asg-MAGScoT_cleanbin_000002

characteristic: title

characteristic: tolid


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: aquatic biome

text: Robert Trench

text: University of California -- Santa Barbara

text: dinoflagellate culture

text: United Kingdom

text: not collected

text: not collected

text: University of Derby

characteristic: geographic location (region and locality)

text: NOT COLLECTED

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Breviolum psygmophilum

characteristic: host scientific name

text: not applicable

characteristic: host sex

characteristic: host taxid

text: JOHN PARKINSON

text: UNIVERSITY OF SOUTH FLORIDA

text: marine biome

text: dinoflagellate metagenome

text: WHOLE ORGANISM

characteristic: organism part

text: ToL

characteristic: sample derived from

text: dinoflagellate metagenome

text: UDUK 0000500

text: NOT COLLECTED

text: N

characteristic: symbiont

text: 3bf47ba5-0839-47b3-9391-853b4c01ca4f-asg-metagenome


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

text: University of Derby

text: NOT PROVIDED

text: Tree of Life Programme

text: public

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

text: MetaBat (version 2.15-15-gd6ea400); DASTOOL (version 1.1.5)

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: Robert Trench

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: dinoflagellate culture

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: University of Derby

text: NOT COLLECTED

text: vegetative cell

text: Breviolum psygmophilum

text: not applicable

text: JOHN PARKINSON

text: UNIVERSITY OF SOUTH FLORIDA

text: metagenome-assembled genome

characteristic: investigation type

text: Dinoflagellate: Breviolum psygmophilum

text: marine biome

characteristic: local environmental context

text: dinoflagellate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Pelagibius sp.

characteristic: organism

text: WHOLE ORGANISM

text: ToL

characteristic: project name

text: Pelagibius sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: UDUK 0000500

text: NOT COLLECTED

text: N

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: 760ca8d6-3f45-411e-84d6-76e93a98b049-asg-bin.1

characteristic: title

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: Robert Trench

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: dinoflagellate culture

text: United Kingdom

text: not collected

text: not collected

text: University of Derby

characteristic: geographic location (region and locality)

text: NOT COLLECTED

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Breviolum psygmophilum

characteristic: host scientific name

text: not applicable

characteristic: host sex

characteristic: host taxid

text: JOHN PARKINSON

text: UNIVERSITY OF SOUTH FLORIDA

text: metagenome-assembled genome

text: Dinoflagellate: Breviolum psygmophilum

text: marine biome

text: dinoflagellate metagenome

text: Rhodococcus qingshengii

text: WHOLE ORGANISM

characteristic: organism part

text: ToL

characteristic: sample derived from

text: Rhodococcus qingshengii

text: Pacbio Sequel II

text: UDUK 0000500

text: NOT COLLECTED

text: N

characteristic: symbiont

text: PROKKA (version 1.14.5)

text: GTDB-TK (version 2.3.2); GTDB (release 214)

text: 0da0299a-37ef-4276-a2da-4a8ecb775f63-asg-bin.54


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Pasteur Institute

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-08-02-2024-14:17:18:634-125444

characteristic: Submitter Id

text: not provided

text: France

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: host health state

characteristic: isolate

text: Vibrio cholerae O1 biovar El Tor str. N16961

characteristic: organism

characteristic: serovar

characteristic: strain

text: ChIPseq anti-FLAG in Vibrio cholerae parB2-3xFLAG (tagged on the chromosomal locus) strain (INPUT) sample b

characteristic: title


text: Pasteur Institute

text: public

text: ena-SAMPLE-TAB-08-02-2024-14:17:18:635-125445

text: not provided

characteristic: collection date

text: France

text: not applicable

characteristic: host scientific name

text: ChIPseq anti-FLAG in Vibrio cholerae parB2-3xFLAG (tagged on the chromosomal locus) strain (IP) sample b


text: Pasteur Institute

text: public

text: ena-SAMPLE-TAB-08-02-2024-14:17:18:635-125446

text: not provided

text: France

text: not applicable

text: ChIPseq anti-FLAG in Vibrio cholerae 29merC/A RctB-3xFLAG (tagged on the chromosomal locus) strain (INPUT) sample b


text: Pasteur Institute

text: public

text: ena-SAMPLE-TAB-08-02-2024-14:17:18:635-125447

text: not provided

text: France

text: not applicable

text: ChIPseq anti-FLAG in Vibrio cholerae 29merC/A RctB-3xFLAG (tagged on the chromosomal locus) strain (IP) sample b


text: Pasteur Institute

text: public

text: ena-SAMPLE-TAB-08-02-2024-14:17:18:635-125448

text: not provided

text: France

text: not applicable

text: ChIPseq anti FLAG in Vibrio cholerae delta Dam (delta dam#4) expressing RctB-3xFLAG (tagged on chromosomal locus) strain (INPUT) sample b


text: Pasteur Institute

text: public

text: ena-SAMPLE-TAB-08-02-2024-14:17:18:635-125449

text: not provided

text: France

text: not applicable

text: ChIPseq anti FLAG in Vibrio cholerae delta Dam (delta dam#4) expressing RctB-3xFLAG (tagged on chromosomal locus) strain (IP) sample b


text: Pasteur Institute

text: public

text: ena-SAMPLE-TAB-08-02-2024-14:17:18:635-125450

text: not provided

text: France

text: not applicable

text: ChIPseq anti FLAG in Vibrio cholerae RctB-3xFLAG (tagged on the chromosomal locus) delta crtS strain (INPUT) sample b


text: Pasteur Institute

text: public

text: ena-SAMPLE-TAB-08-02-2024-14:17:18:635-125451

text: not provided

text: France

text: not applicable

text: ChIPseq anti FLAG in Vibrio cholerae RctB-3xFLAG (tagged on the chromosomal locus) delta crtS strain (IP) sample b


text: Pasteur Institute

text: public

text: ena-SAMPLE-TAB-08-02-2024-14:17:18:635-125452

text: not provided

text: France

text: not applicable

text: ChIPseq anti-FLAG in Vibrio cholerae RctB-3xFLAG (tagged on the chromosomal locus) strain exponential phase (INPUT) sample b


text: Pasteur Institute

text: public

text: ena-SAMPLE-TAB-08-02-2024-14:17:18:636-125453

text: not provided

text: France

text: not applicable

text: Vibrio cholerae O1 biovar El Tor str. N16961

text: ChIPseq anti-FLAG in Vibrio cholerae RctB-3xFLAG (tagged on the chromosomal locus) strain exponential phase (IP) sample b


text: Pasteur Institute

text: public

text: ena-SAMPLE-TAB-08-02-2024-14:17:18:636-125454

text: not provided

text: France

text: not applicable

text: ChIPseq anti FLAG in Vibrio cholerae delta Dam (delta dam#4) expressing RctB-L651P-3xFLAG (tagged on chromosomal locus) strain (INPUT) sample b


text: Pasteur Institute

text: public

text: ena-SAMPLE-TAB-08-02-2024-14:17:18:636-125455

text: not provided

text: France

text: not applicable

text: ChIPseq anti FLAG in Vibrio cholerae delta Dam (delta dam#4) expressing RctB-L651P-3xFLAG (tagged on chromosomal locus) strain (IP) sample b


text: Pasteur Institute

text: public

text: ena-SAMPLE-TAB-08-02-2024-14:17:18:636-125456

text: not provided

text: France

text: not applicable

text: ChIPseq anti FLAG in Vibrio cholerae RctB-L651P-3xFLAG (tagged on the chromosomal locus) delta crtS strain (INPUT) sample b


text: Pasteur Institute

text: public

text: ena-SAMPLE-TAB-08-02-2024-14:17:18:636-125457

text: not provided

text: France

text: not applicable

text: ChIPseq anti FLAG in Vibrio cholerae RctB-L651P-3xFLAG (tagged on the chromosomal locus) delta crtS strain (IP) sample b


text: Pasteur Institute

text: public

text: ena-SAMPLE-TAB-08-02-2024-14:17:18:636-125458

text: not provided

text: France

text: not applicable

text: ChIPseq anti-FLAG in Vibrio cholerae RctB-L651P-3xFLAG (tagged on the chromosomal locus) strain (INPUT) sample b


text: Pasteur Institute

text: public

text: ena-SAMPLE-TAB-08-02-2024-14:17:18:636-125459

text: not provided

text: France

text: not applicable

text: ChIPseq anti-FLAG in Vibrio cholerae RctB-L651P-3xFLAG (tagged on the chromosomal locus) strain (IP) sample b


text: Pasteur Institute

text: public

text: ena-SAMPLE-TAB-08-02-2024-14:17:18:636-125460

text: not provided

text: France

text: not applicable

text: ChIPseq anti-FLAG in Vibrio cholerae RctB-3xFLAG (tagged on the chromosomal locus) strain stationnary phase (INPUT) sample b


text: Pasteur Institute

text: public

text: ena-SAMPLE-TAB-08-02-2024-14:17:18:636-125461

text: not provided

text: France

text: not applicable

text: ChIPseq anti-FLAG in Vibrio cholerae RctB-3xFLAG (tagged on the chromosomal locus) strain stationnary phase (IP) sample b


text: Institute of Medical Virology, Zürich, Switzerland

text: public

text: SIB

characteristic: broker name

text: Universität Zürich, Zürich, Switzerland

characteristic: collecting institution

text: Verena Kufner, Maryam Zaheri, Stefan Schmutz, Kevin Steiner, Annette Audigé, Guido Bloemberg, Michael Huber, Alexandra Trkola

characteristic: collector name

text: Switzerland

text: ZH

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/ZH-UZH-IMV-480cf3f7/2024

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance not initiated by an outbreak

characteristic: sample capture status


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: Universitäts-Kinderspital Zürich, Zürich, Switzerland

text: Switzerland

characteristic: geographic location (country and/or sea)

text: ZH

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba6ca96/2024


text: public

text: SIB

text: Universität Zürich, Zürich, Switzerland

characteristic: collection date

text: Switzerland

text: ZH

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-48079e4e/2024

characteristic: isolate

characteristic: organism

characteristic: title


text: public

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collector name

text: Switzerland

text: ZH

characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

characteristic: host scientific name

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba6cad1/2024


characteristic: ENA first public

text: public

text: SIB

text: Universität Zürich, Zürich, Switzerland

text: Switzerland

text: ZH

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/ZH-UZH-IMV-4807248c/2024

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: Universität Zürich, Zürich, Switzerland

text: Switzerland

text: ZH

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba6cbe1/2024


text: public

text: SIB

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: ZH

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba6c99b/2024

characteristic: isolate

characteristic: organism


text: public

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collector name

text: Switzerland

text: ZH

characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba6c99a/2024

characteristic: title


characteristic: ENA first public

text: public

text: SIB

text: Switzerland

text: ZH

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba6c998/2024


characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SIB

text: Universität Zürich, Zürich, Switzerland

text: Switzerland

text: ZH

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-480ed36b/2024

characteristic: sample capture status


text: public

characteristic: Submitter Id

text: SIB

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: SG

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/SG-UZH-IMV-3ba6c999/2024

characteristic: isolate


text: Anthony Smith, NICD

text: public

text: EnteroBase

characteristic: broker name

text: EnteroBase

text: A. Smith, National Institute for Communicable Diseases

text: Whole genome sequencing data uploaded by EnteroBase user

characteristic: description

text: South Africa

text: North West

characteristic: geographic location (region and locality)

text: Human, Blood culture

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Enteritidis

characteristic: serovar

characteristic: strain


characteristic: ENA first public

text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

text: South Africa

text: KwaZulu-Natal

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Enteritidis

characteristic: title


characteristic: ENA-CHECKLIST

text: Anthony Smith, NICD

characteristic: INSDC center name

text: public

text: EnteroBase

text: EnteroBase

text: South Africa

text: KwaZulu-Natal

text: Human, Blood culture

text: Salmonella enterica

text: Salmonella enterica

text: Typhimurium


text: Anthony Smith, NICD

text: public

characteristic: INSDC status

characteristic: SRA accession

text: EnteroBase

text: EnteroBase

text: South Africa

text: Western Cape

text: Human, Other

text: Salmonella enterica

text: Salmonella enterica

text: Enteritidis


name: Genome sequencing of Nitrospira japonica strain NJ1

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: WASEDA university

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:WASEDA university

characteristic: Submitter Id

text: pure strain

characteristic: cell type

text: Japan

text: activated sludge

characteristic: isolation source

text: Nitrospira japonica

text: Nitrospira japonica


text: SC

text: public

text: PNG

characteristic: anonymized name

text: MDU

characteristic: collected by

characteristic: collection date

text: Salmonella enterica subsp. enterica serovar Typhi

characteristic: common name

text: Papua New Guinea

characteristic: country

text: Salmonella

characteristic: genus

text: Papua New Guinea

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: host

text: Not known

characteristic: host health state

text: not known

characteristic: host status

characteristic: isolate

text: Not known

characteristic: organism

text: Typhi

text: Homo sapiens

characteristic: specific host

type: AMR curated data - CABBAGE

value: chloramphenicol

value: CLSI

value: agar dilution

value: susceptible

value: Salmonella enterica

value: ampicillin

value: nalidixic acid

value: trimethoprim

value: sulfamethoxazole

value: tetracycline

value: spectinomycin

value: gentamicin

value: kanamycin


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SRA-Webin

characteristic: ENA-SUBMISSION-TOOL

characteristic: External Id

text: LIMM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: human

text: SCC from TMA-LS180

characteristic: description

text: Homo sapiens

text: Homo sapiens

characteristic: title

type: has member


text: SRA-Webin

text: LIMM

text: public

characteristic: Submitter Id

text: human

characteristic: common name

text: SCC from TMA-LS168

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from LS044

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS184

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS33

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from LS148

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from LS002

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from LS007

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from LS010

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from LS013

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from LS034

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from LS035

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from LS040

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from LS041

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from LS046

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from LS093

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from LS095

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from LS098

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from LS102

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from LS127

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from LS150

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from LS153

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from LS154

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS107

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS109

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS110

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS111

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS114

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS115

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS116

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS120

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS124

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS125

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS13

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS136

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS138

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS148

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS149

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS150

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS153

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS164

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS17

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS170

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS174

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS179

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS181

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS183

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS19

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS30

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS35

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS47

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS52

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS56

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS65

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS68

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS70

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS72

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS74

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS78

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS79

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS86

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS87

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS88

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS9

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS90

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS94

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS152

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from LS168

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from TMA-LS40

text: Homo sapiens

text: Homo sapiens


text: SRA-Webin

text: LIMM

text: public

text: human

text: SCC from LS043

text: Homo sapiens

text: Homo sapiens


text: SC

text: public

text: PNG

characteristic: anonymized name

text: MDU

characteristic: collected by

characteristic: collection date

text: Papua New Guinea

characteristic: country

text: Salmonella

characteristic: genus

text: Papua New Guinea

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: host

text: Not known

characteristic: host health state

text: not known

characteristic: host status

characteristic: isolate

text: Not known

characteristic: isolation source

text: Typhi

characteristic: serovar

text: Homo sapiens

characteristic: strain

value: cefotaxime

value: ciprofloxacin


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: PNG

characteristic: SRA accession

text: MDU

text: Papua New Guinea

text: Salmonella

text: Papua New Guinea

text: Homo sapiens

text: Not known

text: not known

text: Not known

characteristic: organism

text: Typhi

text: Homo sapiens

characteristic: specific host


text: INRA UMR 1319

text: public

tag: Namespace:INRA UMR 1319

characteristic: Submitter Id

text: RNA-seq of Yarrowia lipolytica (HiSeq 2000, SE, 100pb) on glucose, replicate 1.

characteristic: description

text: Yarrowia lipolytica

text: Yarrowia lipolytica

text: CLIB 122

text: Yarrowia lipolytica RNA-seq on glucose, R1

characteristic: title


text: INRA UMR 1319

text: public

text: RNA-seq of Yarrowia lipolytica (HiSeq 2000, SE, 100pb) on glucose, replicate 2.

text: Yarrowia lipolytica

text: Yarrowia lipolytica

text: CLIB 122

text: Yarrowia lipolytica RNA-seq on glucose, R2


text: INRA UMR 1319

text: public

text: RNA-seq of Yarrowia lipolytica (HiSeq 2000, SE, 100pb) on oleic acids, replicate 1.

text: Yarrowia lipolytica

text: Yarrowia lipolytica

text: CLIB 122

text: Yarrowia lipolytica RNA-seq on oleic acids, R1


text: INRA UMR 1319

text: public

text: RNA-seq of Yarrowia lipolytica (HiSeq 2000, SE, 100pb) on oleic acids, replicate 2.

text: Yarrowia lipolytica

text: Yarrowia lipolytica

text: CLIB 122

text: Yarrowia lipolytica RNA-seq on oleic acids, R2


text: INRA UMR 1319

text: public

text: RNA-seq of Yarrowia lipolytica (HiSeq 2000, SE, 100pb) on tributyrin, replicate 1.

text: Yarrowia lipolytica

text: Yarrowia lipolytica

text: CLIB 122

text: Yarrowia lipolytica RNA-seq on tributyrin, R1


text: INRA UMR 1319

text: public

text: RNA-seq of Yarrowia lipolytica (HiSeq 2000, SE, 100pb) on tributyrin, replicate 2.

text: Yarrowia lipolytica

text: Yarrowia lipolytica

text: CLIB 122

text: Yarrowia lipolytica RNA-seq on tributyrin, R2


text: INRA UMR 1319

text: public

text: RNA-seq of Yarrowia (Candida) galli (HiSeq 2000, SE, 100pb) on glucose, replicate 1.

text: Yarrowia galli

text: Yarrowia galli

text: CBS 9722

text: Yarrowia (Candida) galli RNA-seq on glucose, R1


text: INRA UMR 1319

text: public

text: RNA-seq of Yarrowia (Candida) galli (HiSeq 2000, SE, 100pb) on glucose, replicate 2.

text: Yarrowia galli

text: Yarrowia galli

text: CBS 9722

text: Yarrowia (Candida) galli RNA-seq on glucose, R2


text: INRA UMR 1319

text: public

text: RNA-seq of Yarrowia (Candida) galli (HiSeq 2000, SE, 100pb) on oleic acids, replicate 1.

text: Yarrowia galli

text: Yarrowia galli

text: CBS 9722

text: Yarrowia (Candida) galli RNA-seq on oleic acids, R1


text: INRA UMR 1319

text: public

text: RNA-seq of Yarrowia (Candida) galli (HiSeq 2000, SE, 100pb) on oleic acids, replicate 2.

text: Yarrowia galli

text: Yarrowia galli

text: CBS 9722

text: Yarrowia (Candida) galli RNA-seq on oleic acids, R2


text: INRA UMR 1319

text: public

text: RNA-seq of Yarrowia (Candida) galli (HiSeq 2000, SE, 100pb) on tributyrin, replicate 1.

text: Yarrowia galli

text: Yarrowia galli

text: CBS 9722

text: Yarrowia (Candida) galli RNA-seq on tributyrin, R1


text: INRA UMR 1319

text: public

text: RNA-seq of Yarrowia (Candida) galli (HiSeq 2000, SE, 100pb) on tributyrin, replicate 2.

text: Yarrowia galli

text: Yarrowia galli

text: CBS 9722

text: Yarrowia (Candida) galli RNA-seq on tributyrin, R2


text: INRA UMR 1319

text: public

text: RNA-seq of Yarrowia (Candida) phangngaensis (HiSeq 2000, SE, 100pb) on glucose, replicate 1.

text: Yarrowia phangngaensis

text: Yarrowia phangngaensis

text: CBS 10407

text: Yarrowia (Candida) phangngaensis RNA-seq on glucose, R1


text: INRA UMR 1319

text: public

text: RNA-seq of Yarrowia (Candida) phangngaensis (HiSeq 2000, SE, 100pb) on glucose, replicate 2.

text: Yarrowia phangngaensis

text: Yarrowia phangngaensis

text: CBS 10407

text: Yarrowia (Candida) phangngaensis RNA-seq on glucose, R2


text: INRA UMR 1319

text: public

text: RNA-seq of Yarrowia (Candida) phangngaensis (HiSeq 2000, SE, 100pb) on oleic acids, replicate 1.

text: Yarrowia phangngaensis

text: Yarrowia phangngaensis

text: CBS 10407

text: Yarrowia (Candida) phangngaensis RNA-seq on oleic acids, R1


text: INRA UMR 1319

text: public

text: RNA-seq of Yarrowia (Candida) phangngaensis (HiSeq 2000, SE, 100pb) on oleic acids, replicate 2.

text: Yarrowia phangngaensis

text: Yarrowia phangngaensis

text: CBS 10407

text: Yarrowia (Candida) phangngaensis RNA-seq on oleic acids, R2


text: INRA UMR 1319

text: public

text: RNA-seq of Yarrowia (Candida) phangngaensis (HiSeq 2000, SE, 100pb) on tributyrin, replicate 1.

text: Yarrowia phangngaensis

text: Yarrowia phangngaensis

text: CBS 10407

text: Yarrowia (Candida) phangngaensis RNA-seq on tributyrin, R1


text: INRA UMR 1319

text: public

text: RNA-seq of Yarrowia (Candida) phangngaensis (HiSeq 2000, SE, 100pb) on tributyrin, replicate 2.

text: Yarrowia phangngaensis

text: Yarrowia phangngaensis

text: CBS 10407

text: Yarrowia (Candida) phangngaensis RNA-seq on tributyrin, R2


unit: mg Chl/m3

characteristic: Chlorophyll Sensor

text: tbd

characteristic: Citation

characteristic: Event Date/Time End

text: GSC

text: public

characteristic: Latitude End

characteristic: Longitude End

unit: practical salinity unit

characteristic: Salinity Sensor

unit: m

characteristic: depth

text: This sample (TARA_B100000578) was collected during the Tara Oceans expedition (2009-2013) at station TARA_111 (latitudeN=-16.9601, longitudeE=-100.6335) on date/time=2011-05-31T14:25, using a PUMP (High Volume Peristaltic Pump). The sample material (saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)) was collected at a depth of 3-7 m, targeting a surface water layer (ENVO:00002042) in the marine biome (ENVO:00000447). The sample was size-fractionated (0.22-3 micrometres), and stored in liquid nitrogen for later detection of prokaryote nucleic acid sequences by pyrosequencing methods, and for later metagenomics analysis. This sample has replicate sample(s): TARA_B100000577.

text: marine biome (ENVO:00000447)

characteristic: environment (biome)

text: surface water layer (ENVO:00002042)

characteristic: environment (feature)

characteristic: environment (material)

text: water

characteristic: environmental package

characteristic: event date/time start

characteristic: event label

text: tbd

characteristic: further details

characteristic: last update date

characteristic: latitude start

characteristic: longitude start

unit: µmol/L

characteristic: nitrate sensor

text: marine metagenome

unit: µmol/kg

characteristic: oxygen sensor

text: Tara Oceans expedition (2009-2013)

characteristic: project name

characteristic: protocol label

text: PUMP (High Volume Peristaltic Pump)

characteristic: sample collection device

text: This version can be used to provide data discovery services

characteristic: sample status

characteristic: sampling campaign

text: SV Tara

characteristic: sampling platform

characteristic: sampling station

text: marine metagenome

characteristic: size fraction lower threshold

characteristic: size fraction upper threshold

unit: ºC

characteristic: temperature

text: TARA_20110531T1425Z_111_EVENT_PUMP_P_S_(5 m)_BACT_NUC-DNA(100L)_W0.22-3_TARA_B100000578


text: Mus musculus

characteristic: ArrayExpress-Species

characteristic: ArrayExpress-StrainOrLine

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: house mouse

characteristic: common name

text: Mus musculus

characteristic: organism

text: Mus musculus

characteristic: strain


text: INRA UMR 1319

text: public

text: Pair-end RNA-seq of Y. lipolytica on alkane, replicate 1

characteristic: description

text: Yarrowia lipolytica CLIB122

text: Yarrowia lipolytica CLIB122

text: CLIB 122

text: Yarrowia lipolytica RNA-seq on alkane, R1

characteristic: title


text: INRA UMR 1319

text: public

text: Pair-end RNA-seq of Y. lipolytica on alkane, replicate 2

text: Yarrowia lipolytica CLIB122

text: Yarrowia lipolytica CLIB122

text: CLIB 122

text: Yarrowia lipolytica RNA-seq on alkane, R2


text: INRA UMR 1319

text: public

text: Pair-end RNA-seq of Y. lipolytica on oleic acids, replicate 1

text: Yarrowia lipolytica CLIB122

text: Yarrowia lipolytica CLIB122

text: CLIB 122

text: Yarrowia lipolytica RNA-seq on oleic acids, R1


text: INRA UMR 1319

text: public

text: Pair-end RNA-seq of Y. lipolytica on oleic acids, replicate 2

text: Yarrowia lipolytica CLIB122

text: Yarrowia lipolytica CLIB122

text: CLIB 122

text: Yarrowia lipolytica RNA-seq on oleic acids, R2


text: INRA UMR 1319

text: public

text: Pair-end RNA-seq of Y. lipolytica on YPD28, replicate 1

text: Yarrowia lipolytica CLIB122

text: Yarrowia lipolytica CLIB122

text: CLIB 122

text: Yarrowia lipolytica RNA-seq on YPD28, R1


text: INRA UMR 1319

text: public

text: Pair-end RNA-seq of Y. lipolytica on YPD28, replicate 2

text: Yarrowia lipolytica CLIB122

text: Yarrowia lipolytica CLIB122

text: CLIB 122

text: Yarrowia lipolytica RNA-seq on YPD28, R2


text: INRA UMR 1319

text: public

text: Pair-end RNA-seq of Y. lipolytica on YPD18, replicate 1

text: Yarrowia lipolytica CLIB122

text: Yarrowia lipolytica CLIB122

text: CLIB 122

text: Yarrowia lipolytica RNA-seq on YPD18, R1


text: INRA UMR 1319

text: public

text: Pair-end RNA-seq of Y. lipolytica on YPD18, replicate 2

text: Yarrowia lipolytica CLIB122

text: Yarrowia lipolytica CLIB122

text: CLIB 122

text: Yarrowia lipolytica RNA-seq on YPD18, R2


text: INRA UMR 1319

text: public

text: Pair-end RNA-seq of Y. lipolytica on H2O2, replicate 1

text: Yarrowia lipolytica CLIB122

text: Yarrowia lipolytica CLIB122

text: CLIB 122

text: Yarrowia lipolytica RNA-seq on H2O2, R1


text: INRA UMR 1319

text: public

text: Pair-end RNA-seq of Y. lipolytica on H2O2, replicate 2

text: Yarrowia lipolytica CLIB122

text: Yarrowia lipolytica CLIB122

text: CLIB 122

text: Yarrowia lipolytica RNA-seq on H2O2, R2


text: INRA UMR 1319

text: public

text: Pair-end RNA-seq of Y. lipolytica on PH4, replicate 1

text: Yarrowia lipolytica CLIB122

text: Yarrowia lipolytica CLIB122

text: CLIB 122

text: Yarrowia lipolytica RNA-seq on PH4, R1


text: INRA UMR 1319

text: public

text: Pair-end RNA-seq of Y. lipolytica on PH4, replicate 2

text: Yarrowia lipolytica CLIB122

text: Yarrowia lipolytica CLIB122

text: CLIB 122

text: Yarrowia lipolytica RNA-seq on PH4, R2


text: INRA UMR 1319

text: public

text: Illumina HiSeq 2000, 50 bp, single reads, oriented, on Yarrowia lipolytica, strain CLIB122 (E150) on a YPD (yeast extract, peptone and Glucose, 10 g/L each) media.

text: Yarrowia lipolytica CLIB122

text: Yarrowia lipolytica CLIB122

text: CLIB 122

text: Oriented RNA-seq of Yarrowia lipolytica on YPD


text: Schistosoma mansoni

characteristic: ArrayExpress-Species

text: SC

text: public

text: Schistosoma mansoni

text: Schistosoma mansoni

text: sporocyst cDNA

characteristic: sample description

text: Schistosoma mansoni

text: Schistosoma mansoni


characteristic: ENA-CHECKLIST

text: INRA UMR 1319

text: public

text: Lachancea quebecensis

text: Lachancea quebecensis

text: CBS 14088

text: Lachancea quebecensis genome assembly


characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

characteristic: acc

characteristic: isolate

text: clinical isolate

characteristic: isolation source

text: Escherichia coli

characteristic: plasmid

text: Escherichia coli

text: BioSample entry for Escherichia coli genome, Ecp_H8


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: dog clinical isolate

text: Escherichia coli

text: Escherichia coli

text: BioSample entry for Escherichia coli genome, Ecp_V289


text: INRA UMR 1319

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Complete genome assembly of the strain CBS 2950 of the yeast Lachancea cidri

text: Lachancea cidri

characteristic: organism

text: Lachancea cidri

text: CBS 2950

text: Complete genome assembly of Lachancea cidri


text: INRA UMR 1319

text: public

text: Complete genome assembly of the strain CBS 10888 of the yeast Lachancea dasiensis

characteristic: description

text: Lachancea dasiensis CBS 10888

text: Lachancea dasiensis CBS 10888

text: CBS 10888

characteristic: strain

text: Complete genome assembly of Lachancea dasiensis

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: INRA UMR 1319

text: public

text: Complete genome assembly of the strain CBS 6924 of the yeast Lachancea sp (taxid: 433476).

text: Lachancea sp. CBS 6924

text: Lachancea sp. CBS 6924

text: CBS 6924

text: Complete genome assembly of Lachancea sp. CBS 6924 (taxid: 433476)


text: INRA UMR 1319

text: public

text: Complete genome assembly of the strain CBS 6772 of the yeast Lachancea fermentati

text: Lachancea fermentati

text: Lachancea fermentati

text: CBS 6772

text: Complete genome assembly of Lachancea fermentati


text: INRA UMR 1319

text: public

text: Complete genome assembly of the strain CBS 8951 of the yeast Lachancea meyersii

text: Lachancea meyersii CBS 8951

text: Lachancea meyersii CBS 8951

text: CBS 8951

text: Complete genome assembly of Lachancea meyersii


text: INRA UMR 1319

text: public

text: Complete genome assembly of the strain CBS 11717 of the yeast Lachancea mirantina

text: Lachancea mirantina

text: Lachancea mirantina

text: CBS 11717

text: Complete genome assembly of Lachancea mirantina


text: INRA UMR 1319

text: public

text: Complete genome assembly of the strain CBS 11611 of the yeast Lachancea nothofagi

text: Lachancea nothofagi CBS 11611

text: Lachancea nothofagi CBS 11611

text: CBS 11611

text: Complete genome assembly of Lachancea nothofagi


text: INRA UMR 1319

text: public

text: Whole genome shotgun sequencing of Lachancea cidri strain CBS2950. Illumina HiSeq2000, 50 bp. Used for assembly finishing.

text: Lachancea cidri

text: Lachancea cidri

text: CBS 2950

text: Lachancea cidri CSB2950 shotgun


text: INRA UMR 1319

text: public

text: Whole genome sequencing of Lachancea cidri CBS2950. Roche 454 paired-end (long jump ~ 8kb).

text: Lachancea cidri

text: Lachancea cidri

text: CBS 2950

text: Lachancea cidri CBS2950 Paired-End


text: INRA UMR 1319

text: public

text: Whole genome sequencing of Lachancea cidri CBS 2950. Roche 454 single reads.

text: Lachancea cidri

text: Lachancea cidri

text: CBS 2950

text: Lachancea cidri CBS 2950 Single reads