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characteristic: geographic location (region and locality)

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tag: attribute

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characteristic: geographic location (country and/or sea)

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characteristic: geographic location (country and/or sea)

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characteristic: host subject id

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text: IBV-CSIC

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characteristic: virus identifier


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text: WGA sequencing of SARS-CoV-2 samples

text: Mozambique

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

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characteristic: host health state

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text: male

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text: Sciensano

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characteristic: INSDC status

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text: tinea capitis

characteristic: environment (biome)

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characteristic: environment (feature)

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characteristic: environment (material)

text: Burundi

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text: Sciensano

characteristic: INSDC center name

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characteristic: collection date

text: onychomycosis

text: onychomycosis

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characteristic: geographic location (country and/or sea)

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characteristic: INSDC status

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characteristic: geographic location (longitude)

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characteristic: ENA-CHECKLIST

text: Sciensano

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text: pachyonychia

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text: pachyonychia

text: Belgium

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characteristic: human oral environmental package

text: metagenome

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text: Trichophyton rubrum

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text: Sciensano

characteristic: INSDC center name

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text: tinea pedis

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characteristic: INSDC status

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characteristic: geographic location (country and/or sea)

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characteristic: ENA-CHECKLIST

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text: public

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text: tinea corporis

characteristic: environment (biome)

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characteristic: ENA-CHECKLIST

text: Sciensano

text: public

text: tinea capitis

text: tinea capitis

text: tinea capitis

characteristic: environment (material)

text: Senegal

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-skin

characteristic: human oral environmental package

text: metagenome

characteristic: investigation type

text: Trichophyton soudanense

text: Trichophyton soudanense

text: Ilumina


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sciensano

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: tinea capitis

text: tinea capitis

text: tinea capitis

text: Togo

text: human-skin

text: metagenome

text: Trichophyton soudanense

characteristic: organism

characteristic: project name

text: Trichophyton soudanense

text: Ilumina


text: Sciensano

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: tinea capitis

text: tinea capitis

text: tinea capitis

text: Democratic Republic of the Congo

text: human-skin

text: metagenome

text: Trichophyton violaceum

text: Trichophyton violaceum

text: Ilumina

characteristic: sequencing method

characteristic: title


characteristic: ENA-CHECKLIST

text: Sciensano

text: public

text: tinea capitis

characteristic: environment (biome)

text: tinea capitis

characteristic: environment (feature)

text: tinea capitis

characteristic: environment (material)

text: Iran

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-skin

text: metagenome

text: Trichophyton violaceum

text: Trichophyton violaceum

text: Ilumina


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sciensano

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: skin

text: skin

text: skin

text: Netherlands

text: human-skin

characteristic: human oral environmental package

text: metagenome

characteristic: investigation type

text: Trichophyton violaceum

text: Trichophyton violaceum

text: Ilumina


text: Sciensano

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: tinea capitis

text: tinea capitis

text: tinea capitis

text: Kenya

text: human-skin

text: metagenome

text: Trichophyton yaoundei

characteristic: organism

characteristic: project name

text: Trichophyton yaoundei

text: Ilumina


characteristic: ENA-CHECKLIST

text: Sciensano

text: public

text: tinea corporis

characteristic: environment (biome)

text: tinea corporis

characteristic: environment (feature)

text: tinea corporis

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

text: human-skin

text: metagenome

text: Trichophyton yaoundei

text: Trichophyton yaoundei

text: Ilumina

characteristic: sequencing method

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: FISABIO - Public Health

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:FISABIO - Public Health

text: human metagenome

characteristic: common name

text: Human bladder mucosa

characteristic: description

text: human metagenome

text: human metagenome


text: KING'S COLLEGE LONDON

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:KING'S COLLEGE LONDON

characteristic: Submitter Id

characteristic: collection date

text: human

text: lung

text: lower airways

text: sputum

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-associated

characteristic: human associated environmental package

characteristic: investigation type

text: Homo sapiens

text: NMPN-KCL QS Microbiome

text: Homo sapiens

text: 16S rRNA gene sequencing

text: cystic fibrosis PMA treated sputum


characteristic: ENA-CHECKLIST

text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

text: active surveillance in response to outbreak

characteristic: sample capture status

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

text: Europe / Ireland / Kildare

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: virus identifier


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (longitude)

text: Europe / Ireland / Kildare

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

text: Europe / Ireland / Limerick

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

text: Europe / Ireland / Westmeath

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: sample capture status


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (longitude)

text: Europe / Ireland / Donegal

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

text: Europe / Ireland / Limerick

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: virus identifier


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (longitude)

text: Europe / Ireland / Westmeath

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

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text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

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characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

text: Europe / Ireland / Donegal

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (longitude)

text: Europe / Ireland / Wexford

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

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text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

text: Europe / Ireland / Louth

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: sample capture status


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (longitude)

text: Europe / Ireland / Meath

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

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text: Homo sapiens

characteristic: host scientific name

text: female

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text: not provided

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text: Oro-Nasopharyngeal swab

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text: NVRL

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

text: Europe / Ireland / Monaghan

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: virus identifier


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (longitude)

text: Europe / Ireland / Tipperary

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: not provided

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text: Homo sapiens

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text: not provided

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text: Oro-Nasopharyngeal swab

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characteristic: External Id

text: NVRL

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text: public

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characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

text: Europe / Ireland / Galway

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: not provided

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text: Homo sapiens

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text: female

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text: not provided

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text: Oro-Nasopharyngeal swab

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text: NVRL

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

text: Europe / Ireland / Dublin

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: sample capture status


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (longitude)

text: Europe / Ireland / Offaly

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: not provided

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text: Homo sapiens

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text: male

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text: not provided

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text: Oro-Nasopharyngeal swab

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text: NVRL

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text: public

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characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

text: Europe / Ireland / Cork

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: virus identifier


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (longitude)

text: Europe / Ireland / Kildare

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

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text: Homo sapiens

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text: not provided

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characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

text: Europe / Ireland / Limerick

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (longitude)

text: Europe / Ireland / Louth

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

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text: Homo sapiens

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text: not provided

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text: Oro-Nasopharyngeal swab

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characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

text: Europe / Ireland / Donegal

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: sample capture status


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (longitude)

text: Europe / Ireland / Limerick

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

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text: Homo sapiens

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text: female

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text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

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text: NVRL

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

text: Europe / Ireland / Cork

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: virus identifier


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (longitude)

text: Europe / Ireland / Westmeath

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: not provided

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text: Homo sapiens

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text: not provided

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text: Oro-Nasopharyngeal swab

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text: public

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text: Europe / Ireland / Roscommon

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

text: Europe / Ireland / Cork

text: human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: sample capture status


text: KAROLINSKA INSITUTET

text: public

tag: Namespace:KAROLINSKA INSITUTET

text: Karolinska Institutet

characteristic: collecting institution

text: Hedvig Glans

characteristic: collector name

text: promastigote

characteristic: dev stage

text: Iran

characteristic: geographic location (country and/or sea)

text: recovered

characteristic: host disease outcome

characteristic: isolate

text: Yes

characteristic: isolation source host associated

text: homo sapiens

characteristic: known pathogenicity

text: Leishmania tropica

characteristic: organism

text: Leishmania tropica

text: Leishmania tropica isolate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: KAROLINSKA INSITUTET

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Karolinska Institutet

text: Hedvig Glans

text: promastigote

text: Syria

text: recovered

text: Yes

text: homo sapiens

text: Leishmania tropica

text: Leishmania tropica

text: Leishmania tropica isolate

characteristic: title


text: KAROLINSKA INSITUTET

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Karolinska Institutet

characteristic: collecting institution

characteristic: collection date

text: Hedvig Glans

characteristic: collector name

text: promastigote

text: Afghanistan

text: recovered

text: Yes

text: homo sapiens

text: Leishmania tropica

text: Leishmania tropica

text: Leishmania tropica isolate


text: UNIVERSITY OF WARWICK

text: public

tag: Namespace:UNIVERSITY OF WARWICK

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: SPAdes v.3.13.0 --sc --only-assembler -k 77,99,127; Flye v.2.6 --nano-raw --meta --genome-size 5g --t 90

characteristic: assembly software

text: uncultured marine phages from Plymouth Sound and L4 (surface, 25m)

characteristic: description

text: independent sequence (UViG)

characteristic: detection type

text: sound (Plymouth Sound), marine channel (L4 site)

characteristic: environment (biome)

text: harbor (Plymouth Sound), surface (L4 site), depth of 25m (L4 site)

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: 50°21'44.4N (Plymouth Sound), 50°15'00.0N (L4 site)

characteristic: geographic location (latitude)

text: 4°09'55.2W (Plymouth Sound), 4°13'01.2W (L4 site)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: water from Plymouth Sound and L4 site

characteristic: isolation source

text: aquatic viral metagenome

characteristic: metagenomic source

text: uncultured marine phage

text: undetermined

characteristic: predicted genome structure

text: DNA

characteristic: predicted genome type

text: Viral Metagenomics of water samples collected off the south coast of the UK

characteristic: project name

characteristic: sample derived from

text: uncultured marine phage

text: Illumina HiSeq 4000; MinION

characteristic: sequencing method

text: viral fraction metagenome (virome)

characteristic: source of uvigs

text: DeepVirFinder v.1.0, Checkv v.0.6

characteristic: viral identification software

text: centrifugation

characteristic: virus enrichment approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: KAUST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: house mouse

characteristic: common name

text: Mus musculus

characteristic: organism

text: Mus musculus

characteristic: title


text: IZSAM

text: public

characteristic: collection date

text: Listeria monocytogenes

text: Paired-end reads from the ATCC19115 strain downsampled at a read depth coverage of 10X

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

characteristic: isolate

text: Tissue

characteristic: isolation source

text: 55.0 N 2.50 W

characteristic: lat lon

text: Listeria monocytogenes

text: Listeria monocytogenes

characteristic: serovar

text: Li 2

characteristic: strain

text: Sample DS10700801-DT200908_2020.TE.126588.1.1_Dr10


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IZSAM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Listeria monocytogenes

text: Paired-end reads from the ATCC19115 strain downsampled at a read depth coverage of 100X

text: United Kingdom

text: diseased

text: Homo sapiens

text: Tissue

text: 55.0 N 2.50 W

text: Listeria monocytogenes

text: Listeria monocytogenes

text: Li 2

text: Sample DS10700801-DT200908_2020.TE.126588.1.1_Dr100


text: IZSAM

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Listeria monocytogenes

characteristic: common name

text: Paired-end reads from the ATCC19115 strain downsampled at a read depth coverage of 20X

text: United Kingdom

text: diseased

text: Homo sapiens

text: Tissue

text: 55.0 N 2.50 W

text: Listeria monocytogenes

characteristic: organism

text: Listeria monocytogenes

text: Li 2

text: Sample DS10700801-DT200908_2020.TE.126588.1.1_Dr20

characteristic: title


text: IZSAM

text: public

text: Listeria monocytogenes

text: Paired-end reads from the ATCC19115 strain downsampled at a read depth coverage of 30X

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

characteristic: isolate

text: Tissue

characteristic: isolation source

text: 55.0 N 2.50 W

characteristic: lat lon

text: Listeria monocytogenes

text: Listeria monocytogenes

text: Li 2

text: Sample DS10700801-DT200908_2020.TE.126588.1.1_Dr30


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IZSAM

characteristic: INSDC center name

text: public

text: Listeria monocytogenes

text: Paired-end reads from the ATCC19115 strain downsampled at a read depth coverage of 40X

text: United Kingdom

text: diseased

text: Homo sapiens

text: Tissue

text: 55.0 N 2.50 W

text: Listeria monocytogenes

text: Listeria monocytogenes

characteristic: serovar

text: Li 2

characteristic: strain

text: Sample DS10700801-DT200908_2020.TE.126588.1.1_Dr40


text: IZSAM

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Listeria monocytogenes

characteristic: common name

text: Paired-end reads from the ATCC19115 strain downsampled at a read depth coverage of 50X

text: United Kingdom

text: diseased

text: Homo sapiens

text: Tissue

text: 55.0 N 2.50 W

text: Listeria monocytogenes

text: Listeria monocytogenes

text: Li 2

text: Sample DS10700801-DT200908_2020.TE.126588.1.1_Dr50


text: IZSAM

text: public

text: Listeria monocytogenes

text: Paired-end reads from the ATCC19115 strain downsampled at a read depth coverage of 60X

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

characteristic: isolate

text: Tissue

text: 55.0 N 2.50 W

text: Listeria monocytogenes

characteristic: organism

text: Listeria monocytogenes

text: Li 2

text: Sample DS10700801-DT200908_2020.TE.126588.1.1_Dr60

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IZSAM

characteristic: INSDC center name

text: public

text: Listeria monocytogenes

text: Paired-end reads from the ATCC19115 strain downsampled at a read depth coverage of 70X

text: United Kingdom

text: diseased

text: Homo sapiens

text: Tissue

characteristic: isolation source

text: 55.0 N 2.50 W

characteristic: lat lon

text: Listeria monocytogenes

text: Listeria monocytogenes

text: Li 2

text: Sample DS10700801-DT200908_2020.TE.126588.1.1_Dr70


text: IZSAM

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Listeria monocytogenes

text: Paired-end reads from the ATCC19115 strain downsampled at a read depth coverage of 80X

text: United Kingdom

text: diseased

text: Homo sapiens

text: Tissue

text: 55.0 N 2.50 W

text: Listeria monocytogenes

text: Listeria monocytogenes

characteristic: serovar

text: Li 2

characteristic: strain

text: Sample DS10700801-DT200908_2020.TE.126588.1.1_Dr80


text: IZSAM

text: public

characteristic: collection date

text: Listeria monocytogenes

characteristic: common name

text: Paired-end reads from the ATCC19115 strain downsampled at a read depth coverage of 90X

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

characteristic: isolate

text: Tissue

text: 55.0 N 2.50 W

text: Listeria monocytogenes

text: Listeria monocytogenes

text: Li 2

text: Sample DS10700801-DT200908_2020.TE.126588.1.1_Dr90


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IZSAM

characteristic: INSDC center name

text: public

text: Listeria monocytogenes

text: Paired-end reads from the ATCC19114 strain downsampled at a read depth coverage of 10X

text: USA

text: diseased

text: Animalia

text: Tissue

text: 39.47 N 101.17 W

text: Listeria monocytogenes

characteristic: organism

text: Listeria monocytogenes

text: Li 23

text: Sample DS10700802-DT200908_2020.TE.126588.1.2_Dr10

characteristic: title